Your job contains 1 sequence.
>018985
MADRYRLFSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLA
ASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGR
YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ
SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC
GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC
LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSLCS
The BLAST search returned 5 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 018985
(348 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2090136 - symbol:AT3G15430 "AT3G15430" species... 1344 2.8e-137 1
TAIR|locus:2092190 - symbol:AT3G26100 species:3702 "Arabi... 378 6.5e-35 1
RGD|1306366 - symbol:Herc1 "HECT and RLD domain containin... 278 6.4e-23 1
UNIPROTKB|J9NWD8 - symbol:HERC1 "Uncharacterized protein"... 262 1.3e-22 2
UNIPROTKB|F1MNS0 - symbol:HERC1 "Uncharacterized protein"... 278 1.9e-22 2
UNIPROTKB|F1S098 - symbol:HERC1 "Uncharacterized protein"... 278 1.9e-22 2
UNIPROTKB|Q15751 - symbol:HERC1 "Probable E3 ubiquitin-pr... 278 1.9e-22 2
UNIPROTKB|E2QYQ5 - symbol:HERC1 "Uncharacterized protein"... 270 1.9e-22 2
UNIPROTKB|E1C4H7 - symbol:HERC1 "Uncharacterized protein"... 278 3.4e-22 1
UNIPROTKB|F1NCH3 - symbol:HERC4 "Uncharacterized protein"... 257 9.0e-21 1
UNIPROTKB|E1BW48 - symbol:HERC2 "Uncharacterized protein"... 261 2.2e-20 1
UNIPROTKB|E1C8K2 - symbol:HERC2 "Uncharacterized protein"... 261 2.2e-20 1
UNIPROTKB|F1PB99 - symbol:HERC5 "Uncharacterized protein"... 255 2.9e-20 1
TAIR|locus:2163986 - symbol:UVR8 "UVB-RESISTANCE 8" speci... 251 3.9e-20 1
RGD|1307803 - symbol:Herc3 "HECT and RLD domain containin... 254 4.5e-20 1
UNIPROTKB|F1RW66 - symbol:HERC3 "Uncharacterized protein"... 254 5.7e-20 1
UNIPROTKB|E2RMB0 - symbol:HERC3 "Uncharacterized protein"... 253 1.2e-19 1
UNIPROTKB|Q15034 - symbol:HERC3 "Probable E3 ubiquitin-pr... 253 1.2e-19 1
TAIR|locus:2025277 - symbol:PRAF1 "AT1G76950" species:370... 252 2.0e-19 1
FB|FBgn0031107 - symbol:HERC2 "HECT and RLD domain contai... 254 4.3e-19 2
ZFIN|ZDB-GENE-070718-6 - symbol:herc2 "hect domain and RL... 253 4.3e-19 2
RGD|1561739 - symbol:Herc6 "HECT and RLD domain containin... 250 4.5e-19 1
UNIPROTKB|F1LPM8 - symbol:Herc6 "Protein Herc6" species:1... 250 4.5e-19 1
UNIPROTKB|E2RFW5 - symbol:HERC4 "Uncharacterized protein"... 250 4.6e-19 1
UNIPROTKB|E1C514 - symbol:HERC3 "Uncharacterized protein"... 250 4.6e-19 1
UNIPROTKB|E2RFV1 - symbol:HERC4 "Uncharacterized protein"... 250 4.6e-19 1
UNIPROTKB|E1BAV2 - symbol:HERC4 "Uncharacterized protein"... 249 6.5e-19 1
UNIPROTKB|O95714 - symbol:HERC2 "E3 ubiquitin-protein lig... 253 7.7e-19 1
UNIPROTKB|E2RDC2 - symbol:HERC2 "Uncharacterized protein"... 253 7.7e-19 1
UNIPROTKB|F1N1N9 - symbol:HERC5 "Uncharacterized protein"... 248 7.9e-19 1
UNIPROTKB|Q9UII4 - symbol:HERC5 "E3 ISG15--protein ligase... 248 8.8e-19 1
UNIPROTKB|F1NBC5 - symbol:HERC3 "Uncharacterized protein"... 248 9.1e-19 1
TAIR|locus:2165770 - symbol:AT5G42140 "AT5G42140" species... 248 9.4e-19 1
UNIPROTKB|G3MX12 - symbol:HERC2 "Uncharacterized protein"... 252 1.2e-18 1
UNIPROTKB|E1B782 - symbol:HERC2 "Uncharacterized protein"... 252 1.2e-18 1
ZFIN|ZDB-GENE-090313-139 - symbol:herc3 "hect domain and ... 247 1.4e-18 1
UNIPROTKB|A2VDP7 - symbol:HERC3 "HERC3 protein" species:9... 246 1.9e-18 1
UNIPROTKB|D4ACN3 - symbol:Herc2 "Protein Herc2" species:1... 248 5.7e-18 1
MGI|MGI:103234 - symbol:Herc2 "hect (homologous to the E6... 248 5.7e-18 1
MGI|MGI:1914388 - symbol:Herc6 "hect domain and RLD 6" sp... 242 6.4e-18 1
ZFIN|ZDB-GENE-090311-16 - symbol:si:ch211-281g13.4 "si:ch... 239 1.7e-17 1
ZFIN|ZDB-GENE-090311-56 - symbol:si:ch73-190m4.1 "si:ch73... 239 1.7e-17 1
WB|WBGene00021685 - symbol:herc-1 species:6239 "Caenorhab... 239 1.7e-17 1
UNIPROTKB|Q9BL11 - symbol:herc-1 "Protein HERC-1" species... 239 1.7e-17 1
FB|FBgn0035207 - symbol:CG9153 species:7227 "Drosophila m... 239 1.8e-17 1
TAIR|locus:505006603 - symbol:AT5G12350 "AT5G12350" speci... 239 1.9e-17 1
ZFIN|ZDB-GENE-070615-14 - symbol:zgc:163136 "zgc:163136" ... 236 4.1e-17 1
RGD|1307989 - symbol:Herc2 "HECT and RLD domain containin... 245 5.8e-17 2
UNIPROTKB|F1M560 - symbol:Herc2 "Protein Herc2" species:1... 245 5.9e-17 2
ZFIN|ZDB-GENE-030131-7951 - symbol:rcbtb1 "regulator of c... 227 1.7e-16 1
TAIR|locus:2086253 - symbol:AT3G23270 "AT3G23270" species... 231 1.8e-16 1
TAIR|locus:2205794 - symbol:AT1G27060 species:3702 "Arabi... 223 1.9e-16 1
TAIR|locus:2009739 - symbol:AT1G65920 species:3702 "Arabi... 230 2.3e-16 1
UNIPROTKB|F1N7C1 - symbol:HERC6 "Uncharacterized protein"... 230 2.4e-16 1
RGD|1310971 - symbol:Herc4 "HECT and RLD domain containin... 230 2.5e-16 1
UNIPROTKB|O95199 - symbol:RCBTB2 "RCC1 and BTB domain-con... 223 5.8e-16 1
ZFIN|ZDB-GENE-090311-7 - symbol:si:ch211-281g13.5 "si:ch2... 226 7.0e-16 1
MGI|MGI:1914595 - symbol:Herc4 "hect domain and RLD 4" sp... 226 7.7e-16 1
UNIPROTKB|Q5GLZ8 - symbol:HERC4 "Probable E3 ubiquitin-pr... 225 1.0e-15 1
FB|FBgn0031769 - symbol:CG9135 species:7227 "Drosophila m... 170 1.3e-15 2
MGI|MGI:1351630 - symbol:Sergef "secretion regulating gua... 217 2.0e-15 1
ZFIN|ZDB-GENE-081015-2 - symbol:rpgrb "retinitis pigmento... 222 3.5e-15 1
UNIPROTKB|G3V1B4 - symbol:SERGEF "Secretion-regulating gu... 210 5.4e-15 1
UNIPROTKB|F1PBB3 - symbol:HERC6 "Uncharacterized protein"... 218 6.6e-15 1
UNIPROTKB|Q9UGK8 - symbol:SERGEF "Secretion-regulating gu... 210 1.3e-14 1
MGI|MGI:1917200 - symbol:Rcbtb2 "regulator of chromosome ... 210 2.1e-14 1
UNIPROTKB|F1S9B1 - symbol:SERGEF "Uncharacterized protein... 204 2.3e-14 1
RGD|1563497 - symbol:Sergef "secretion regulating guanine... 204 2.4e-14 1
MGI|MGI:1344037 - symbol:Rpgr "retinitis pigmentosa GTPas... 211 4.2e-14 1
UNIPROTKB|Q8IVU3 - symbol:HERC6 "Probable E3 ubiquitin-pr... 206 1.7e-13 1
UNIPROTKB|F1NUG6 - symbol:Gga.50841 "Uncharacterized prot... 204 1.7e-13 1
UNIPROTKB|Q3MHW0 - symbol:SERGEF "Secretion-regulating gu... 200 2.1e-13 1
UNIPROTKB|E1BVG2 - symbol:RCBTB1 "Uncharacterized protein... 201 2.1e-13 1
DICTYBASE|DDB_G0282575 - symbol:DDB_G0282575 "putative GT... 152 2.3e-13 2
TAIR|locus:504956339 - symbol:RUG1 "AT5G08710" species:37... 196 5.2e-13 1
DICTYBASE|DDB_G0269934 - symbol:DDB_G0269934 "Ras GTPase ... 201 1.5e-12 1
UNIPROTKB|Q9N1T2 - symbol:RPGR "X-linked retinitis pigmen... 197 1.7e-12 1
UNIPROTKB|F1NXV1 - symbol:IBTK "Uncharacterized protein" ... 198 2.0e-12 1
RGD|1306897 - symbol:Nek8 "NIMA-related kinase 8" species... 194 2.3e-12 1
UNIPROTKB|E9PMV6 - symbol:SERGEF "Secretion-regulating gu... 170 2.5e-12 1
UNIPROTKB|E1BRZ2 - symbol:NEK8 "Uncharacterized protein" ... 193 2.9e-12 1
MGI|MGI:1918677 - symbol:Ibtk "inhibitor of Bruton agamma... 196 3.3e-12 1
MGI|MGI:1890646 - symbol:Nek8 "NIMA (never in mitosis gen... 192 3.8e-12 1
UNIPROTKB|E9PDR5 - symbol:IBTK "Inhibitor of Bruton tyros... 194 4.6e-12 1
UNIPROTKB|E7EPI0 - symbol:IBTK "Inhibitor of Bruton tyros... 194 5.6e-12 1
UNIPROTKB|Q9P2D0 - symbol:IBTK "Inhibitor of Bruton tyros... 194 5.7e-12 1
UNIPROTKB|I3LCV3 - symbol:RCBTB1 "Uncharacterized protein... 189 5.7e-12 1
UNIPROTKB|Q74AS9 - symbol:GSU2272 "ATS1 domain repeat lip... 185 8.1e-12 1
TIGR_CMR|GSU_2272 - symbol:GSU_2272 "lipoprotein, putativ... 185 8.1e-12 1
ZFIN|ZDB-GENE-020509-1 - symbol:nek8 "NIMA (never in mito... 189 8.3e-12 1
UNIPROTKB|F1PV11 - symbol:RCBTB1 "Uncharacterized protein... 187 8.8e-12 1
UNIPROTKB|Q8NDN9 - symbol:RCBTB1 "RCC1 and BTB domain-con... 187 8.8e-12 1
ZFIN|ZDB-GENE-070912-423 - symbol:rpgra "retinitis pigmen... 193 9.7e-12 1
FB|FBgn0045980 - symbol:niki "nimA-like kinase" species:7... 189 1.1e-11 1
UNIPROTKB|F1RQL8 - symbol:IBTK "Uncharacterized protein" ... 190 1.6e-11 1
MGI|MGI:1918580 - symbol:Rcbtb1 "regulator of chromosome ... 184 1.9e-11 1
UNIPROTKB|B4DFC0 - symbol:SERGEF "Secretion-regulating gu... 161 2.5e-11 1
UNIPROTKB|E1BKF7 - symbol:RCBTB1 "Uncharacterized protein... 183 2.5e-11 1
UNIPROTKB|F1MMV0 - symbol:IBTK "Uncharacterized protein" ... 188 2.7e-11 1
UNIPROTKB|Q9P258 - symbol:RCC2 "Protein RCC2" species:960... 158 3.1e-11 2
WARNING: Descriptions of 109 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2090136 [details] [associations]
symbol:AT3G15430 "AT3G15430" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] [GO:0006486 "protein glycosylation" evidence=RCA]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002686 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 EMBL:AB022218 EMBL:AC024081 HSSP:P18754
EMBL:AY150379 IPI:IPI00535822 RefSeq:NP_566512.1 RefSeq:NP_974323.1
UniGene:At.24353 ProteinModelPortal:Q9LDU3 SMR:Q9LDU3 IntAct:Q9LDU3
EnsemblPlants:AT3G15430.1 EnsemblPlants:AT3G15430.2 GeneID:820782
KEGG:ath:AT3G15430 TAIR:At3g15430 InParanoid:Q9LDU3 OMA:GDNERAQ
PhylomeDB:Q9LDU3 ProtClustDB:CLSN2688406 Genevestigator:Q9LDU3
Uniprot:Q9LDU3
Length = 488
Score = 1344 (478.2 bits), Expect = 2.8e-137, P = 2.8e-137
Identities = 254/344 (73%), Positives = 282/344 (81%)
Query: 1 MADRYRLFSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLA 60
MADR L S E+LPSHLI E+LTSGRLSAVDL LELTSK FGGSHG YP KFRSL D A
Sbjct: 1 MADRNCLISFEDLPSHLILEVLTSGRLSAVDLLSLELTSKVFGGSHGFYPLKFRSLADYA 60
Query: 61 ASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGR 120
ASQLC++H +Y GM Q EL C GNWKR+ FLQSVE SSD+VETS G MQI TG+
Sbjct: 61 ASQLCSMHPVYVGMGLTTQKELFANCEGNWKRLFSFLQSVEQSSDMVETSQGKMQIATGK 120
Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
YHTLLI+NS V+SCG SL GVL HG ETTQCV+FT I FP A V QVSA++NH+AFVLQ
Sbjct: 121 YHTLLINNSKVYSCGVSLSGVLAHGSETTQCVAFTPIEFPFPAQVAQVSATQNHSAFVLQ 180
Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
SGQV TCGDNSS CCGH DT+RPIFRP+LVEALKG PCKQV AGL+FT FL+ GH +TC
Sbjct: 181 SGQVLTCGDNSSHCCGHLDTSRPIFRPKLVEALKGTPCKQVAAGLHFTVFLSREGHAYTC 240
Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
GSNTHGQLGHGDTLDRP PK + L+ +G VVQIAAGPSY+LAVT +G VYSFGSGSNFC
Sbjct: 241 GSNTHGQLGHGDTLDRPVPKVVEFLKTIGPVVQIAAGPSYVLAVTQDGSVYSFGSGSNFC 300
Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
LGHGEQ DELQPR IQ F+RKGIH++RVSAGDEH VALDS+G V
Sbjct: 301 LGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVALDSNGRV 344
Score = 257 (95.5 bits), Expect = 1.8e-21, P = 1.8e-21
Identities = 61/206 (29%), Positives = 113/206 (54%)
Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASE 172
Q++ + H+ + S V +CG + GH +T++ + + + QV+A
Sbjct: 167 QVSATQNHSAFVLQSGQVLTCGDNSSHCCGH-LDTSRPIFRPKLVEALKGTPCKQVAAGL 225
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGV-PCKQVTAGLNFTGF 230
+ F+ + G +TCG N+ GH DT +RP+ P++VE LK + P Q+ AG ++
Sbjct: 226 HFTVFLSREGHAYTCGSNTHGQLGHGDTLDRPV--PKVVEFLKTIGPVVQIAAGPSYVLA 283
Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGV 289
+T G V++ GS ++ LGHG+ D P+ I + G +++++AG + +A+ NG
Sbjct: 284 VTQDGSVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVALDSNGR 343
Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAI 315
VY++G G LGHG+++D++ P+ +
Sbjct: 344 VYTWGKGYCGALGHGDENDKITPQVL 369
Score = 255 (94.8 bits), Expect = 6.0e-21, P = 6.0e-21
Identities = 73/247 (29%), Positives = 114/247 (46%)
Query: 106 IVETSAGN--MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSA 162
+VE G Q+ G + T+ +S ++CGS+ G LGHG + V +
Sbjct: 209 LVEALKGTPCKQVAAGLHFTVFLSREGHAYTCGSNTHGQLGHGDTLDRPVPKVVEFLKTI 268
Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK--GVPCKQ 220
VVQ++A ++ V Q G V++ G S+FC GH + + +PR+++A K G+ +
Sbjct: 269 GPVVQIAAGPSYVLAVTQDGSVYSFGSGSNFCLGHGEQQDEL-QPRVIQAFKRKGIHILR 327
Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
V+AG L G V+T G G LGHGD D+ TP+ + L VQ+ A
Sbjct: 328 VSAGDEHAVALDSNGRVYTWGKGYCGALGHGDENDKITPQVLVNLNNC-LAVQVCARKRK 386
Query: 281 MLAVTGNGVVYSFGSGSNFCLG---HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
+ G++Y FG LG G L+PR ++ K V +VS G H +
Sbjct: 387 TFVLVEGGLLYGFGWMGFGSLGFPDRGVSDKVLRPRVLECL--KPHRVSQVSTGLYHTIV 444
Query: 338 LDSSGYV 344
+ G +
Sbjct: 445 VTQRGRI 451
Score = 170 (64.9 bits), Expect = 6.4e-10, P = 6.4e-10
Identities = 58/215 (26%), Positives = 92/215 (42%)
Query: 105 DIVETSAGNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP-SA 162
+ ++T +QI G + L ++ + SV+S GS LGHG + + F
Sbjct: 263 EFLKTIGPVVQIAAGPSYVLAVTQDGSVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKG 322
Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
H+++VSA + HA + +G+V+T G GH D N I P+++ L QV
Sbjct: 323 IHILRVSAGDEHAVALDSNGRVYTWGKGYCGALGHGDENDKI-TPQVLVNLNNCLAVQVC 381
Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGD--TLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
A T L G ++ G G LG D D+ + + V Q++ G +
Sbjct: 382 ARKRKTFVLVEGGLLYGFGWMGFGSLGFPDRGVSDKVLRPRVLECLKPHRVSQVSTGLYH 441
Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAI 315
+ VT G ++ FG LGH L+P I
Sbjct: 442 TIVVTQRGRIFGFGDNERAQLGHDSLRGCLEPTEI 476
>TAIR|locus:2092190 [details] [associations]
symbol:AT3G26100 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002686
EMBL:AB023041 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 HSSP:P18754
EMBL:AK230272 IPI:IPI00540426 RefSeq:NP_974362.1 UniGene:At.25510
UniGene:At.69016 ProteinModelPortal:Q9LU80 SMR:Q9LU80 STRING:Q9LU80
PRIDE:Q9LU80 EnsemblPlants:AT3G26100.2 GeneID:822208
KEGG:ath:AT3G26100 TAIR:At3g26100 HOGENOM:HOG000070923
InParanoid:Q9LU80 OMA:LACQPNG PhylomeDB:Q9LU80
ProtClustDB:CLSN2688790 Genevestigator:Q9LU80 Uniprot:Q9LU80
Length = 532
Score = 378 (138.1 bits), Expect = 6.5e-35, P = 6.5e-35
Identities = 116/345 (33%), Positives = 162/345 (46%)
Query: 8 FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCAL 67
F + PS ++ +LT RL DLA+LE T F P SL +LAA +C
Sbjct: 46 FPLAANPS-IVLHVLTECRLDPRDLANLEATCSFFSQPANFAPDINLSLSELAALDMCNK 104
Query: 68 HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLI- 126
I+ M+ + E+ RC G+WK VLRFL + E E S Q G H++ +
Sbjct: 105 RVIFKPMNEEERQEMKRRCGGSWKLVLRFLLAGEACCRR-EKS----QAVAGPGHSVAVT 159
Query: 127 SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 186
S V++ G + G LGHG T + ++Q +A + G+V+
Sbjct: 160 SKGEVYTFGYNNSGQLGHG-HTEDEARIQPVRSLQGVRIIQAAAGAARTMLISDDGKVYA 218
Query: 187 CGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
CG S G + T +P+ P+LV +LK + Q G FT L+ G V+T
Sbjct: 219 CGKESFGEAEYGGQGT-KPVTTPQLVTSLKNIFVVQAAIGNYFTAVLSREGKVYTFSWGN 277
Query: 245 HGQLGHG-DTLD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVT--GNGV-VYSFGSGSNF 299
G+LGH + D P P + PLE V VVQIAAG Y+LA+ NG+ VYS G G
Sbjct: 278 DGRLGHQTEAADVEPRPL-LGPLENV-PVVQIAAGYCYLLALACQPNGMSVYSVGCGLGG 335
Query: 300 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
LGHG + DE PR I+ F+ + V+AG H + G V
Sbjct: 336 KLGHGSRTDEKYPRVIEQFQILNLQPRVVAAGAWHAAVVGQDGRV 380
Score = 158 (60.7 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 68/250 (27%), Positives = 101/250 (40%)
Query: 114 MQITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
+Q G Y T ++S FS G+ G LGH E + VVQ++A
Sbjct: 252 VQAAIGNYFTAVLSREGKVYTFSWGND--GRLGHQTEAADVEPRPLLGPLENVPVVQIAA 309
Query: 171 SENHA-AFVLQ-SGQ-VFTCGDNSSFCCGHRDTNRPIFRPRLVEALK--GVPCKQVTAGL 225
+ A Q +G V++ G GH + PR++E + + + V AG
Sbjct: 310 GYCYLLALACQPNGMSVYSVGCGLGGKLGHGSRTDEKY-PRVIEQFQILNLQPRVVAAGA 368
Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
+ G V T G +G LGHG+ PK + L V V +A G V+
Sbjct: 369 WHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVEGLSHV-KAVHVATGDYTTFVVS 427
Query: 286 GNGVVYSFGSGSNFCLGHGEQHDE--------LQPRAIQTFRRKGIHVVRVSAGDE---- 333
+G VYSFG G + LGH DE L P + + ++ +V++S +
Sbjct: 428 DDGDVYSFGCGESASLGHHPSFDEQGNRHANVLSPTVVTSLKQVNERMVQISLTNSIYWN 487
Query: 334 -HVVALDSSG 342
H AL SG
Sbjct: 488 AHTFALTESG 497
Score = 147 (56.8 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 58/191 (30%), Positives = 87/191 (45%)
Query: 130 SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFT 186
SV+S G L G LGHG T + + R+ +Q V+A HAA V Q G+V T
Sbjct: 325 SVYSVGCGLGGKLGHGSRTDE--KYPRVIEQFQILNLQPRVVAAGAWHAAVVGQDGRVCT 382
Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR-GHVHTCGSNTH 245
G C GH + P++VE L V V G ++T F+ G V++ G
Sbjct: 383 WGWGRYGCLGHGNEECESV-PKVVEGLSHVKAVHVATG-DYTTFVVSDDGDVYSFGCGES 440
Query: 246 GQLGHGDTLDRP--------TPKSIAPLEEVGS-VVQIAAGPS-----YMLAVTGNGVVY 291
LGH + D +P + L++V +VQI+ S + A+T +G ++
Sbjct: 441 ASLGHHPSFDEQGNRHANVLSPTVVTSLKQVNERMVQISLTNSIYWNAHTFALTESGKLF 500
Query: 292 SFGSGSNFCLG 302
+FG+G LG
Sbjct: 501 AFGAGDQGQLG 511
Score = 124 (48.7 bits), Expect = 0.00010, P = 0.00010
Identities = 24/75 (32%), Positives = 42/75 (56%)
Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
Q AGP + +AVT G VY+FG ++ LGHG DE + + +++ + G+ +++ +AG
Sbjct: 147 QAVAGPGHSVAVTSKGEVYTFGYNNSGQLGHGHTEDEARIQPVRSLQ--GVRIIQAAAGA 204
Query: 333 EHVVALDSSGYVSLC 347
+ + G V C
Sbjct: 205 ARTMLISDDGKVYAC 219
>RGD|1306366 [details] [associations]
symbol:Herc1 "HECT and RLD domain containing E3 ubiquitin
protein ligase family member 1" species:10116 "Rattus norvegicus"
[GO:0010507 "negative regulation of autophagy" evidence=ISO]
[GO:0021702 "cerebellar Purkinje cell differentiation"
evidence=ISO] [GO:0031175 "neuron projection development"
evidence=ISO] [GO:0050885 "neuromuscular process controlling
balance" evidence=ISO] RGD:1306366 INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 OrthoDB:EOG40GCPW
GeneTree:ENSGT00700000104312 IPI:IPI00765979
Ensembl:ENSRNOT00000049300 UCSC:RGD:1306366 Uniprot:D3Z9N9
Length = 1203
Score = 278 (102.9 bits), Expect = 6.4e-23, P = 6.4e-23
Identities = 73/235 (31%), Positives = 124/235 (52%)
Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
I G+Y T +IS + SV +CG G LG G Q + ++ F + +VS+S
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466
Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
+ H G+VF+ GD GH +++ + P+L++ L+G V+AG +
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525
Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
+T G ++T G G+LGHGD+ R P + + VG +++ G S+ +A++ +G
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582
Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
V+SFG G N LGHG+ + +P+ I+ + G+ + +V AG + +AL S+G V
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQ--GMFIRKVCAGSQSSLALTSTGQV 635
Score = 245 (91.3 bits), Expect = 3.2e-18, P = 3.2e-18
Identities = 79/229 (34%), Positives = 115/229 (50%)
Query: 122 HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQ-VSASENHAAFV 178
HTL + VFS G G LGHG +TQ + + I P VV VSA H+A V
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAGYRHSAAV 526
Query: 179 LQSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH- 236
+ G+++T G+ GH D+N R I P LV+ + V +V+ G + T L+ G
Sbjct: 527 TEDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNVG--EVSCGSSHTIALSKDGRT 582
Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
V + G +G+LGHGDT PK I L+ + + ++ AG LA+T G VY++G G
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCG 641
Query: 297 SNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
+ CLG G L+P+ I+ +V +S GD H ++L V
Sbjct: 642 A--CLGCGSSEATALRPKLIEELA--ATRIVDISIGDSHCLSLSHDNEV 686
Score = 199 (75.1 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 63/228 (27%), Positives = 114/228 (50%)
Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
++ G H+ ++ + +++ G G LGHG ++ + T + ++V +VS +H
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIP-TLVK--DISNVGEVSCGSSH 572
Query: 175 AAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
+ + G+ F GDN GH DTNR +++P+++EAL+G+ ++V AG + L
Sbjct: 573 TIALSKDGRTVWSFGGGDNGKL--GHGDTNR-VYKPKVIEALQGMFIRKVCAGSQSSLAL 629
Query: 232 TIRGHVHTCGSNTHGQLGHGDT-LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
T G V+ G LG G + PK I L +V I+ G S+ L+++ + V
Sbjct: 630 TSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAAT-RIVDISIGDSHCLSLSHDNEV 686
Query: 291 YSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVA 337
Y++G+ S G G + +P+ + GI + ++SAG H +A
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGL--DGIAIQQISAGTSHSLA 732
Score = 184 (69.8 bits), Expect = 6.6e-11, P = 6.6e-11
Identities = 70/247 (28%), Positives = 111/247 (44%)
Query: 103 SSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA 162
+SD T A I TG ++ V+ GS+ L G T + + ++ PS
Sbjct: 347 ASDYSRTCASPDSIQTGDA-PIVSETCEVYVWGSNSSHQLVEG--TQEKILQPKLA-PSF 402
Query: 163 AHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLV-EALKGVPCKQ 220
+ + A + + FV+ + G V CG S G D+N +L E + + K+
Sbjct: 403 SDAQTIEAGQ-YCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSI--KK 459
Query: 221 VTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGSVVQ-IA 275
V++ G T G V + G +G+LGHG++ + PK I PL+ G VV ++
Sbjct: 460 VSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQ--GKVVVCVS 517
Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
AG + AVT +G +Y++G G LGHG+ + P ++ G VS G H
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSSHT 573
Query: 336 VALDSSG 342
+AL G
Sbjct: 574 IALSKDG 580
Score = 161 (61.7 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 48/174 (27%), Positives = 84/174 (48%)
Query: 115 QITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
+++ G HT+ +S +V+S G G LGHG +T + I + +V A
Sbjct: 565 EVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEALQGMFIRKVCAGS 623
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
+ + +GQV+ G + CG + RP+L+E L ++ G + L+
Sbjct: 624 QSSLALTSTGQVYAWGCGACLGCGSSEATA--LRPKLIEELAATRIVDISIGDSHCLSLS 681
Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVT 285
V+ G+N+ GQ G G++ T PK ++ L+ + ++ QI+AG S+ LA T
Sbjct: 682 HDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI-AIQQISAGTSHSLAWT 734
Score = 126 (49.4 bits), Expect = 0.00018, P = 0.00018
Identities = 32/122 (26%), Positives = 57/122 (46%)
Query: 106 IVETSAGNM--QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA 162
++E G ++ G +L L S V++ G C LG G + I +A
Sbjct: 607 VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAA 664
Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
+V +S ++H + +V+ G+NS CG ++ PI +P+ V L G+ +Q++
Sbjct: 665 TRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQIS 724
Query: 223 AG 224
AG
Sbjct: 725 AG 726
>UNIPROTKB|J9NWD8 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR017986 InterPro:IPR000569
InterPro:IPR001680 InterPro:IPR003877 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00622 PROSITE:PS50082 PROSITE:PS50237
PROSITE:PS50294 SMART:SM00119 SMART:SM00320 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016567 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449
PROSITE:PS50188 SUPFAM:SSF56204 GeneTree:ENSGT00700000104312
EMBL:AAEX03016202 Ensembl:ENSCAFT00000042764 Uniprot:J9NWD8
Length = 4118
Score = 262 (97.3 bits), Expect = 1.3e-22, Sum P(2) = 1.3e-22
Identities = 73/235 (31%), Positives = 122/235 (51%)
Query: 115 QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
Q+ G+ T +I +N +V +CG G LG G V T I+ V Q+
Sbjct: 3288 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 3346
Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
S+ H+ + +SG+VF+ GD GH +++R RPR +EAL+G Q++ G +
Sbjct: 3347 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQR-RPRQIEALQGEEVVQMSCGFKHSAV 3405
Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
+T G + T G+ +G+LG G+T ++ P+ + LE + Q+A G ++ LAV+ +G +
Sbjct: 3406 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY-QIGQVACGLNHTLAVSADGSM 3464
Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
V++FG G LG G + P+ + GI + +V+ G + VAL G+V
Sbjct: 3465 VWAFGDGDYGKLGLGNSTAKSSPQKVDVLC--GIGIKKVACGTQFSVALTKDGHV 3517
Score = 187 (70.9 bits), Expect = 6.6e-11, Sum P(2) = 6.6e-11
Identities = 64/227 (28%), Positives = 105/227 (46%)
Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
+Q++ G H+ ++ S+ +F+ G+ G LG G + + + R+ + QV+
Sbjct: 3394 VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 3452
Query: 173 NHAAFVLQSGQ-VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
NH V G V+ GD G ++ P+ V+ L G+ K+V G F+ L
Sbjct: 3453 NHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKVDVLCGIGIKKVACGTQFSVAL 3511
Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNGVV 290
T GHV+T G + L G + P+ I L G V++ +A G + LA+ G V
Sbjct: 3512 TKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVL--AGVVIEDVAVGAEHTLALASTGDV 3569
Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
Y++GS S LG G + +P + + K I ++SAG H A
Sbjct: 3570 YAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIR--QISAGRCHSAA 3614
Score = 180 (68.4 bits), Expect = 4.3e-10, Sum P(2) = 4.3e-10
Identities = 52/187 (27%), Positives = 91/187 (48%)
Query: 160 PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
PS + QV +N FV+Q+ G V CG+ S G +++ + ++ AL+G
Sbjct: 3281 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSD-DLHVLTVISALQGFVV 3338
Query: 219 KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
Q+ G LT G V + G +G+LGHG++ + P+ I L+ VVQ++
Sbjct: 3339 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGE-EVVQMS 3397
Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
G + VT +G +++FG+G LG G ++ P + +G + +V+ G H
Sbjct: 3398 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 3455
Query: 336 VALDSSG 342
+A+ + G
Sbjct: 3456 LAVSADG 3462
Score = 139 (54.0 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 50/174 (28%), Positives = 77/174 (44%)
Query: 115 QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
Q+ G HTL +S S V++ G G LG G T + S +++ + +V+
Sbjct: 3447 QVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKVDVLCGIGIKKVACGT 3505
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
+ + + G V+T G + R N RP+ + L GV + V G T L
Sbjct: 3506 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHN--RPQQIPVLAGVVIEDVAVGAEHTLAL 3563
Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
G V+ GSN+ GQLG G T P + L+ ++ QI+AG + A T
Sbjct: 3564 ASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGK-NIRQISAGRCHSAAWT 3616
Score = 53 (23.7 bits), Expect = 1.3e-22, Sum P(2) = 1.3e-22
Identities = 20/66 (30%), Positives = 37/66 (56%)
Query: 10 IEELPSHLIFEILTSGRLSAVDLAH-LELTSKTFGGSHGLYPQKFRSLVDLAASQLCALH 68
++ LP + ++ T+ ++++ L L +T+ T+ L P+ +SL+DL SQL L
Sbjct: 1103 LQLLPKTGVSQLSTALKVASTRLLQILAITTGTYADK--LSPKVVQSLLDLLCSQLKNLL 1160
Query: 69 SIYAGM 74
S AG+
Sbjct: 1161 S-QAGV 1165
>UNIPROTKB|F1MNS0 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR017986 InterPro:IPR000569 InterPro:IPR001680
InterPro:IPR003877 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00622
PROSITE:PS50082 PROSITE:PS50237 PROSITE:PS50294 SMART:SM00119
SMART:SM00320 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016567
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 SUPFAM:SSF56204
OMA:HHYQDGI GeneTree:ENSGT00700000104312 EMBL:DAAA02028744
EMBL:DAAA02028745 EMBL:DAAA02028746 IPI:IPI00924381
Ensembl:ENSBTAT00000061038 ArrayExpress:F1MNS0 Uniprot:F1MNS0
Length = 4857
Score = 278 (102.9 bits), Expect = 3.4e-22, P = 3.4e-22
Identities = 73/235 (31%), Positives = 124/235 (52%)
Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
I G+Y T +IS + SV +CG G LG G Q + ++ F + +VS+S
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466
Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
+ H G+VF+ GD GH +++ + P+L++ L+G V+AG +
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525
Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
+T G ++T G G+LGHGD+ R P + + VG +++ G S+ +A++ +G
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582
Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
V+SFG G N LGHG+ + +P+ I+ + G+ + +V AG + +AL S+G V
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQ--GMFIRKVCAGSQSSLALTSTGQV 635
Score = 262 (97.3 bits), Expect = 1.9e-22, Sum P(2) = 1.9e-22
Identities = 73/235 (31%), Positives = 122/235 (51%)
Query: 115 QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
Q+ G+ T +I +N +V +CG G LG G V T I+ V Q+
Sbjct: 4026 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4084
Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
S+ H+ + +SG+VF+ GD GH +++R RPR +EAL+G Q++ G +
Sbjct: 4085 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQR-RPRQIEALQGEEVVQMSCGFKHSAV 4143
Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
+T G + T G+ +G+LG G+T ++ P+ + LE + Q+A G ++ LAV+ +G +
Sbjct: 4144 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY-QIGQVACGLNHTLAVSADGSM 4202
Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
V++FG G LG G + P+ + GI + +V+ G + VAL G+V
Sbjct: 4203 VWAFGDGDYGKLGLGNSTAKSSPQKVDVLC--GIGIKKVACGTQFSVALTKDGHV 4255
Score = 248 (92.4 bits), Expect = 5.8e-18, P = 5.8e-18
Identities = 80/229 (34%), Positives = 115/229 (50%)
Query: 122 HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQ-VSASENHAAFV 178
HTL + VFS G G LGHG +TQ + + I P VV VSA H+A V
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAGYRHSAAV 526
Query: 179 LQSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH- 236
+ G+++T G+ GH D+N R I P LV+ + V +V+ G + T L+ G
Sbjct: 527 TEDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNVG--EVSCGSSHTIALSKDGRT 582
Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
V + G +G+LGHGDT PK I L+ + + ++ AG LA+T G VY++G G
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCG 641
Query: 297 SNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
+ CLG G L+P+ I+ +V +S GD H +AL V
Sbjct: 642 A--CLGCGSSEATALRPKLIEELA--ATRIVDISIGDSHCLALSHDNEV 686
Score = 202 (76.2 bits), Expect = 2.9e-12, P = 2.9e-12
Identities = 64/228 (28%), Positives = 114/228 (50%)
Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
++ G H+ ++ + +++ G G LGHG ++ + T + ++V +VS +H
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIP-TLVK--DISNVGEVSCGSSH 572
Query: 175 AAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
+ + G+ F GDN GH DTNR +++P+++EAL+G+ ++V AG + L
Sbjct: 573 TIALSKDGRTVWSFGGGDNGKL--GHGDTNR-VYKPKVIEALQGMFIRKVCAGSQSSLAL 629
Query: 232 TIRGHVHTCGSNTHGQLGHGDT-LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
T G V+ G LG G + PK I L +V I+ G S+ LA++ + V
Sbjct: 630 TSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAAT-RIVDISIGDSHCLALSHDNEV 686
Query: 291 YSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVA 337
Y++G+ S G G + +P+ + GI + ++SAG H +A
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGL--DGIAIQQISAGTSHSLA 732
Score = 189 (71.6 bits), Expect = 8.7e-11, P = 8.7e-11
Identities = 72/248 (29%), Positives = 114/248 (45%)
Query: 103 SSDIVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPS 161
+SD T A I TG T ++S + V+ GS+ L G T + + ++ PS
Sbjct: 347 ASDYSRTCASPDSIQTG--DTPIVSETCEVYVWGSNSSHQLVEG--TQEKILQPKLA-PS 401
Query: 162 AAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLV-EALKGVPCK 219
+ + A + + FV+ + G V CG S G D+N +L E + + K
Sbjct: 402 FSDAQTIEAGQ-YCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSI--K 458
Query: 220 QVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGSVVQ-I 274
+V++ G T G V + G +G+LGHG++ + PK I PL+ G VV +
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQ--GKVVVCV 516
Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 334
+AG + AVT +G +Y++G G LGHG+ + P ++ G VS G H
Sbjct: 517 SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSSH 572
Query: 335 VVALDSSG 342
+AL G
Sbjct: 573 TIALSKDG 580
Score = 186 (70.5 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 63/227 (27%), Positives = 105/227 (46%)
Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
+Q++ G H+ ++ S+ +F+ G+ G LG G + + + R+ + QV+
Sbjct: 4132 VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 4190
Query: 173 NHAAFVLQSGQ-VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
NH V G V+ GD G ++ P+ V+ L G+ K+V G F+ L
Sbjct: 4191 NHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKVDVLCGIGIKKVACGTQFSVAL 4249
Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNGVV 290
T GHV+T G + L G + P+ I L G V++ +A G + LA+ G V
Sbjct: 4250 TKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVL--AGVVIEDVAVGAEHTLALASTGDV 4307
Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
Y++GS S LG G + +P + + K + ++SAG H A
Sbjct: 4308 YAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVR--QISAGRCHSAA 4352
Score = 180 (68.4 bits), Expect = 6.0e-10, Sum P(2) = 6.0e-10
Identities = 52/187 (27%), Positives = 91/187 (48%)
Query: 160 PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
PS + QV +N FV+Q+ G V CG+ S G +++ + ++ AL+G
Sbjct: 4019 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSD-DLHVLTVISALQGFVV 4076
Query: 219 KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
Q+ G LT G V + G +G+LGHG++ + P+ I L+ VVQ++
Sbjct: 4077 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGE-EVVQMS 4135
Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
G + VT +G +++FG+G LG G ++ P + +G + +V+ G H
Sbjct: 4136 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4193
Query: 336 VALDSSG 342
+A+ + G
Sbjct: 4194 LAVSADG 4200
Score = 161 (61.7 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 48/174 (27%), Positives = 84/174 (48%)
Query: 115 QITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
+++ G HT+ +S +V+S G G LGHG +T + I + +V A
Sbjct: 565 EVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEALQGMFIRKVCAGS 623
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
+ + +GQV+ G + CG + RP+L+E L ++ G + L+
Sbjct: 624 QSSLALTSTGQVYAWGCGACLGCGSSEATA--LRPKLIEELAATRIVDISIGDSHCLALS 681
Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVT 285
V+ G+N+ GQ G G++ T PK ++ L+ + ++ QI+AG S+ LA T
Sbjct: 682 HDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI-AIQQISAGTSHSLAWT 734
Score = 140 (54.3 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 51/174 (29%), Positives = 77/174 (44%)
Query: 115 QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
Q+ G HTL +S S V++ G G LG G T + S +++ + +V+
Sbjct: 4185 QVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKVDVLCGIGIKKVACGT 4243
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
+ + + G V+T G + R N RP+ + L GV + V G T L
Sbjct: 4244 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHN--RPQQIPVLAGVVIEDVAVGAEHTLAL 4301
Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
G V+ GSN+ GQLG G T P + L+ +V QI+AG + A T
Sbjct: 4302 ASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGK-NVRQISAGRCHSAAWT 4354
Score = 53 (23.7 bits), Expect = 1.9e-22, Sum P(2) = 1.9e-22
Identities = 20/66 (30%), Positives = 37/66 (56%)
Query: 10 IEELPSHLIFEILTSGRLSAVDLAH-LELTSKTFGGSHGLYPQKFRSLVDLAASQLCALH 68
++ LP + ++ T+ ++++ L L +T+ T+ L P+ +SL+DL SQL L
Sbjct: 1796 LQLLPKTGVSQLSTALKVASTRLLQILAITTGTYADK--LSPKVVQSLLDLLCSQLKNLL 1853
Query: 69 SIYAGM 74
S AG+
Sbjct: 1854 S-QAGV 1858
>UNIPROTKB|F1S098 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005622 "intracellular" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR017986 InterPro:IPR000569 InterPro:IPR001680
InterPro:IPR003877 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00622
PROSITE:PS50082 PROSITE:PS50237 PROSITE:PS50294 SMART:SM00119
SMART:SM00320 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016567
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 SUPFAM:SSF56204
CTD:8925 KO:K10594 OMA:HHYQDGI GeneTree:ENSGT00700000104312
EMBL:CU550694 EMBL:CU582937 RefSeq:XP_001927286.4 UniGene:Ssc.96208
UniGene:Ssc.97542 Ensembl:ENSSSCT00000005038 GeneID:100153537
KEGG:ssc:100153537 Uniprot:F1S098
Length = 4859
Score = 278 (102.9 bits), Expect = 3.4e-22, P = 3.4e-22
Identities = 73/235 (31%), Positives = 124/235 (52%)
Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
I G+Y T +IS + SV +CG G LG G Q + ++ F + +VS+S
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466
Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
+ H G+VF+ GD GH +++ + P+L++ L+G V+AG +
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525
Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
+T G ++T G G+LGHGD+ R P + + VG +++ G S+ +A++ +G
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582
Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
V+SFG G N LGHG+ + +P+ I+ + G+ + +V AG + +AL S+G V
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQ--GMFIRKVCAGSQSSLALTSTGQV 635
Score = 262 (97.3 bits), Expect = 1.9e-22, Sum P(2) = 1.9e-22
Identities = 73/235 (31%), Positives = 122/235 (51%)
Query: 115 QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
Q+ G+ T +I +N +V +CG G LG G V T I+ V Q+
Sbjct: 4029 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4087
Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
S+ H+ + +SG+VF+ GD GH +++R RPR +EAL+G Q++ G +
Sbjct: 4088 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQR-RPRQIEALQGEEVVQMSCGFKHSAV 4146
Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
+T G + T G+ +G+LG G+T ++ P+ + LE + Q+A G ++ LAV+ +G +
Sbjct: 4147 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY-QIGQVACGLNHTLAVSADGSM 4205
Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
V++FG G LG G + P+ + GI + +V+ G + VAL G+V
Sbjct: 4206 VWAFGDGDYGKLGLGNSTAKSSPQKVDVLC--GIGIKKVACGTQFSVALTKDGHV 4258
Score = 248 (92.4 bits), Expect = 5.8e-18, P = 5.8e-18
Identities = 80/229 (34%), Positives = 115/229 (50%)
Query: 122 HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQ-VSASENHAAFV 178
HTL + VFS G G LGHG +TQ + + I P VV VSA H+A V
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAGYRHSAAV 526
Query: 179 LQSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH- 236
+ G+++T G+ GH D+N R I P LV+ + V +V+ G + T L+ G
Sbjct: 527 TEDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNVG--EVSCGSSHTIALSKDGRT 582
Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
V + G +G+LGHGDT PK I L+ + + ++ AG LA+T G VY++G G
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCG 641
Query: 297 SNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
+ CLG G L+P+ I+ +V +S GD H +AL V
Sbjct: 642 A--CLGCGSSEATALRPKLIEELA--ATRIVDISIGDSHCLALSHDNEV 686
Score = 202 (76.2 bits), Expect = 3.0e-12, P = 3.0e-12
Identities = 64/228 (28%), Positives = 114/228 (50%)
Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
++ G H+ ++ + +++ G G LGHG ++ + T + ++V +VS +H
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIP-TLVK--DISNVGEVSCGSSH 572
Query: 175 AAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
+ + G+ F GDN GH DTNR +++P+++EAL+G+ ++V AG + L
Sbjct: 573 TIALSKDGRTVWSFGGGDNGKL--GHGDTNR-VYKPKVIEALQGMFIRKVCAGSQSSLAL 629
Query: 232 TIRGHVHTCGSNTHGQLGHGDT-LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
T G V+ G LG G + PK I L +V I+ G S+ LA++ + V
Sbjct: 630 TSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAAT-RIVDISIGDSHCLALSHDNEV 686
Query: 291 YSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVA 337
Y++G+ S G G + +P+ + GI + ++SAG H +A
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGL--DGIAIQQISAGTSHSLA 732
Score = 186 (70.5 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 63/227 (27%), Positives = 105/227 (46%)
Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
+Q++ G H+ ++ S+ +F+ G+ G LG G + + + R+ + QV+
Sbjct: 4135 VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 4193
Query: 173 NHAAFVLQSGQ-VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
NH V G V+ GD G ++ P+ V+ L G+ K+V G F+ L
Sbjct: 4194 NHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKVDVLCGIGIKKVACGTQFSVAL 4252
Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNGVV 290
T GHV+T G + L G + P+ I L G V++ +A G + LA+ G V
Sbjct: 4253 TKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVL--AGVVIEDVAVGAEHTLALASTGDV 4310
Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
Y++GS S LG G + +P + + K + ++SAG H A
Sbjct: 4311 YAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVR--QISAGRCHSAA 4355
Score = 184 (69.8 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 70/247 (28%), Positives = 111/247 (44%)
Query: 103 SSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA 162
+SD T A I TG ++ V+ GS+ L G T + + ++ PS
Sbjct: 347 ASDYSRTCASPDSIQTGDA-PIVSETCEVYVWGSNSSHQLVEG--TQEKILQPKLA-PSF 402
Query: 163 AHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLV-EALKGVPCKQ 220
+ + A + + FV+ + G V CG S G D+N +L E + + K+
Sbjct: 403 SDAQTIEAGQ-YCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSI--KK 459
Query: 221 VTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGSVVQ-IA 275
V++ G T G V + G +G+LGHG++ + PK I PL+ G VV ++
Sbjct: 460 VSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQ--GKVVVCVS 517
Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
AG + AVT +G +Y++G G LGHG+ + P ++ G VS G H
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSSHT 573
Query: 336 VALDSSG 342
+AL G
Sbjct: 574 IALSKDG 580
Score = 180 (68.4 bits), Expect = 6.0e-10, Sum P(2) = 6.0e-10
Identities = 52/187 (27%), Positives = 91/187 (48%)
Query: 160 PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
PS + QV +N FV+Q+ G V CG+ S G +++ + ++ AL+G
Sbjct: 4022 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSD-DLHVLTVISALQGFVV 4079
Query: 219 KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
Q+ G LT G V + G +G+LGHG++ + P+ I L+ VVQ++
Sbjct: 4080 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGE-EVVQMS 4138
Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
G + VT +G +++FG+G LG G ++ P + +G + +V+ G H
Sbjct: 4139 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4196
Query: 336 VALDSSG 342
+A+ + G
Sbjct: 4197 LAVSADG 4203
Score = 161 (61.7 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 48/174 (27%), Positives = 84/174 (48%)
Query: 115 QITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
+++ G HT+ +S +V+S G G LGHG +T + I + +V A
Sbjct: 565 EVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEALQGMFIRKVCAGS 623
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
+ + +GQV+ G + CG + RP+L+E L ++ G + L+
Sbjct: 624 QSSLALTSTGQVYAWGCGACLGCGSSEATA--LRPKLIEELAATRIVDISIGDSHCLALS 681
Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVT 285
V+ G+N+ GQ G G++ T PK ++ L+ + ++ QI+AG S+ LA T
Sbjct: 682 HDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI-AIQQISAGTSHSLAWT 734
Score = 140 (54.3 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 51/174 (29%), Positives = 77/174 (44%)
Query: 115 QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
Q+ G HTL +S S V++ G G LG G T + S +++ + +V+
Sbjct: 4188 QVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKVDVLCGIGIKKVACGT 4246
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
+ + + G V+T G + R N RP+ + L GV + V G T L
Sbjct: 4247 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHN--RPQQIPVLAGVVIEDVAVGAEHTLAL 4304
Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
G V+ GSN+ GQLG G T P + L+ +V QI+AG + A T
Sbjct: 4305 ASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGK-NVRQISAGRCHSAAWT 4357
Score = 53 (23.7 bits), Expect = 1.9e-22, Sum P(2) = 1.9e-22
Identities = 20/66 (30%), Positives = 37/66 (56%)
Query: 10 IEELPSHLIFEILTSGRLSAVDLAH-LELTSKTFGGSHGLYPQKFRSLVDLAASQLCALH 68
++ LP + ++ T+ ++++ L L +T+ T+ L P+ +SL+DL SQL L
Sbjct: 1796 LQLLPKTGVSQLSTALKVASTRLLQILAITTGTYADK--LSPKVVQSLLDLLCSQLKNLL 1853
Query: 69 SIYAGM 74
S AG+
Sbjct: 1854 S-QAGV 1858
>UNIPROTKB|Q15751 [details] [associations]
symbol:HERC1 "Probable E3 ubiquitin-protein ligase HERC1"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0005086 "ARF
guanyl-nucleotide exchange factor activity" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=TAS] Pfam:PF00632
InterPro:IPR017986 InterPro:IPR000569 InterPro:IPR001680
InterPro:IPR003877 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00622
PROSITE:PS50082 PROSITE:PS50237 PROSITE:PS50294 SMART:SM00119
SMART:SM00320 UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005829 GO:GO:0005794 GO:GO:0016020 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 GO:GO:0005086
SUPFAM:SSF56204 eggNOG:COG5021 EMBL:U50078 EMBL:AC073167
EMBL:AC118274 EMBL:BC040929 IPI:IPI00022479 PIR:S71752
RefSeq:NP_003913.3 UniGene:Hs.210385 HSSP:Q922Y1
ProteinModelPortal:Q15751 SMR:Q15751 IntAct:Q15751 STRING:Q15751
PhosphoSite:Q15751 DMDM:296434522 PaxDb:Q15751 PRIDE:Q15751
Ensembl:ENST00000443617 GeneID:8925 KEGG:hsa:8925 UCSC:uc002amp.3
CTD:8925 GeneCards:GC15M063900 HGNC:HGNC:4867 HPA:HPA049749
MIM:605109 neXtProt:NX_Q15751 PharmGKB:PA29242 HOGENOM:HOG000168589
HOVERGEN:HBG053919 InParanoid:Q15751 KO:K10594 OMA:HHYQDGI
OrthoDB:EOG40GCPW GenomeRNAi:8925 NextBio:33556 ArrayExpress:Q15751
Bgee:Q15751 CleanEx:HS_HERC1 Genevestigator:Q15751 Uniprot:Q15751
Length = 4861
Score = 278 (102.9 bits), Expect = 3.4e-22, P = 3.4e-22
Identities = 73/235 (31%), Positives = 124/235 (52%)
Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
I G+Y T +IS + SV +CG G LG G Q + ++ F + +VS+S
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466
Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
+ H G+VF+ GD GH +++ + P+L++ L+G V+AG +
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525
Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
+T G ++T G G+LGHGD+ R P + + VG +++ G S+ +A++ +G
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582
Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
V+SFG G N LGHG+ + +P+ I+ + G+ + +V AG + +AL S+G V
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQ--GMFIRKVCAGSQSSLALTSTGQV 635
Score = 263 (97.6 bits), Expect = 1.9e-22, Sum P(2) = 1.9e-22
Identities = 74/235 (31%), Positives = 122/235 (51%)
Query: 115 QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
Q+ G+ T +I +N +V +CG G LG G V T I+ V Q+
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4089
Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
S+ H+ + +SG+VF+ GD GH +++R RPR +EAL+G Q++ G +
Sbjct: 4090 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQR-RPRQIEALQGEEVVQMSCGFKHSAV 4148
Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
+T G + T G+ +G+LG G+T ++ P+ + LE + Q+A G ++ LAV+ +G +
Sbjct: 4149 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY-QIGQVACGLNHTLAVSADGSM 4207
Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
V++FG G LG G + P+ I GI + +V+ G + VAL G+V
Sbjct: 4208 VWAFGDGDYGKLGLGNSTAKSSPQKIDVLC--GIGIKKVACGTQFSVALTKDGHV 4260
Score = 249 (92.7 bits), Expect = 4.1e-18, P = 4.1e-18
Identities = 81/229 (35%), Positives = 115/229 (50%)
Query: 122 HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQ-VSASENHAAFV 178
HTL + VFS G G LGHG +TQ + + I P VV VSA H+A V
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAGYRHSAAV 526
Query: 179 LQSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH- 236
+ G+++T G+ GH D+N R I P LV+ + V +V+ G + T L+ G
Sbjct: 527 TEDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNVG--EVSCGSSHTIALSKDGRT 582
Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
V + G +G+LGHGDT PK I L+ + + ++ AG LA+T G VY++G G
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCG 641
Query: 297 SNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
+ CLG G L+P+ I+ +V VS GD H +AL V
Sbjct: 642 A--CLGCGSSEATALRPKLIEELA--ATRIVDVSIGDSHCLALSHDNEV 686
Score = 201 (75.8 bits), Expect = 3.8e-12, P = 3.8e-12
Identities = 63/228 (27%), Positives = 114/228 (50%)
Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
++ G H+ ++ + +++ G G LGHG ++ + T + ++V +VS +H
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIP-TLVK--DISNVGEVSCGSSH 572
Query: 175 AAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
+ + G+ F GDN GH DTNR +++P+++EAL+G+ ++V AG + L
Sbjct: 573 TIALSKDGRTVWSFGGGDNGKL--GHGDTNR-VYKPKVIEALQGMFIRKVCAGSQSSLAL 629
Query: 232 TIRGHVHTCGSNTHGQLGHGDT-LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
T G V+ G LG G + PK I L +V ++ G S+ LA++ + V
Sbjct: 630 TSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAAT-RIVDVSIGDSHCLALSHDNEV 686
Query: 291 YSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVA 337
Y++G+ S G G + +P+ + GI + ++SAG H +A
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGL--DGIAIQQISAGTSHSLA 732
Score = 184 (69.8 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 70/247 (28%), Positives = 111/247 (44%)
Query: 103 SSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA 162
+SD T A I TG ++ V+ GS+ L G T + + ++ PS
Sbjct: 347 ASDYSRTCASPDSIQTGDA-PIVSETCEVYVWGSNSSHQLVEG--TQEKILQPKLA-PSF 402
Query: 163 AHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLV-EALKGVPCKQ 220
+ + A + + FV+ + G V CG S G D+N +L E + + K+
Sbjct: 403 SDAQTIEAGQ-YCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSI--KK 459
Query: 221 VTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGSVVQ-IA 275
V++ G T G V + G +G+LGHG++ + PK I PL+ G VV ++
Sbjct: 460 VSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQ--GKVVVCVS 517
Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
AG + AVT +G +Y++G G LGHG+ + P ++ G VS G H
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSSHT 573
Query: 336 VALDSSG 342
+AL G
Sbjct: 574 IALSKDG 580
Score = 180 (68.4 bits), Expect = 7.6e-10, Sum P(2) = 7.6e-10
Identities = 52/187 (27%), Positives = 91/187 (48%)
Query: 160 PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
PS + QV +N FV+Q+ G V CG+ S G +++ + ++ AL+G
Sbjct: 4024 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSD-DLHVLTVISALQGFVV 4081
Query: 219 KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
Q+ G LT G V + G +G+LGHG++ + P+ I L+ VVQ++
Sbjct: 4082 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGE-EVVQMS 4140
Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
G + VT +G +++FG+G LG G ++ P + +G + +V+ G H
Sbjct: 4141 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4198
Query: 336 VALDSSG 342
+A+ + G
Sbjct: 4199 LAVSADG 4205
Score = 162 (62.1 bits), Expect = 9.0e-08, P = 9.0e-08
Identities = 49/174 (28%), Positives = 84/174 (48%)
Query: 115 QITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
+++ G HT+ +S +V+S G G LGHG +T + I + +V A
Sbjct: 565 EVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEALQGMFIRKVCAGS 623
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
+ + +GQV+ G + CG + RP+L+E L V+ G + L+
Sbjct: 624 QSSLALTSTGQVYAWGCGACLGCGSSEATA--LRPKLIEELAATRIVDVSIGDSHCLALS 681
Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVT 285
V+ G+N+ GQ G G++ T PK ++ L+ + ++ QI+AG S+ LA T
Sbjct: 682 HDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI-AIQQISAGTSHSLAWT 734
Score = 143 (55.4 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 63/216 (29%), Positives = 91/216 (42%)
Query: 115 QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
Q+ G HTL +S S V++ G G LG G T + S +I+ + +V+
Sbjct: 4190 QVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKIDVLCGIGIKKVACGT 4248
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
+ + + G V+T G + R N RP+ + L GV + V G T L
Sbjct: 4249 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHN--RPQQIPVLAGVIIEDVAVGAEHTLAL 4306
Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
G V+ GSN+ GQLG G T P + L+ +V QI+AG + A T V
Sbjct: 4307 ASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGK-NVRQISAGRCHSAAWTAPPVPP 4365
Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR 327
G + L G D + P+ R IH VR
Sbjct: 4366 R-APGVSVPLQLGLP-DTVPPQ-YGALREVSIHTVR 4398
Score = 52 (23.4 bits), Expect = 1.9e-22, Sum P(2) = 1.9e-22
Identities = 16/56 (28%), Positives = 32/56 (57%)
Query: 10 IEELPSHLIFEILTSGRLSAVDLAH-LELTSKTFGGSHGLYPQKFRSLVDLAASQL 64
++ LP + ++ T+ ++++ L L +T+ T+ L P+ +SL+DL SQL
Sbjct: 1796 LQLLPKTGVSQLSTALKVASTRLLQILAITTGTYADK--LSPKVVQSLLDLLCSQL 1849
>UNIPROTKB|E2QYQ5 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR017986 InterPro:IPR000569
InterPro:IPR001680 InterPro:IPR003877 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00622 PROSITE:PS50082 PROSITE:PS50237
PROSITE:PS50294 SMART:SM00119 SMART:SM00320 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016567 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449
PROSITE:PS50188 SUPFAM:SSF56204 OMA:HHYQDGI
GeneTree:ENSGT00700000104312 EMBL:AAEX03016202
Ensembl:ENSCAFT00000026962 Uniprot:E2QYQ5
Length = 4863
Score = 270 (100.1 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 72/236 (30%), Positives = 124/236 (52%)
Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
I G+Y T +IS + SV +CG G LG G Q + ++ F + +VS+S
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466
Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
+ H G+VF+ GD GH +++ + P+L++ L+G V+AG +
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525
Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
+T G ++T G G+LGHGD+ R P + + VG +++ G S+ +A++ +G
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582
Query: 290 VYSFGSGSNFC-LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
V+SFG G N LGHG+ + +P+ ++ + G+ + +V AG + +AL S+G V
Sbjct: 583 VWSFGGGDNVGKLGHGDTNRVYKPKVVEALQ--GMFIRKVCAGSQSSLALTSTGQV 636
Score = 262 (97.3 bits), Expect = 1.9e-22, Sum P(2) = 1.9e-22
Identities = 73/235 (31%), Positives = 122/235 (51%)
Query: 115 QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
Q+ G+ T +I +N +V +CG G LG G V T I+ V Q+
Sbjct: 4032 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4090
Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
S+ H+ + +SG+VF+ GD GH +++R RPR +EAL+G Q++ G +
Sbjct: 4091 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQR-RPRQIEALQGEEVVQMSCGFKHSAV 4149
Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
+T G + T G+ +G+LG G+T ++ P+ + LE + Q+A G ++ LAV+ +G +
Sbjct: 4150 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY-QIGQVACGLNHTLAVSADGSM 4208
Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
V++FG G LG G + P+ + GI + +V+ G + VAL G+V
Sbjct: 4209 VWAFGDGDYGKLGLGNSTAKSSPQKVDVLC--GIGIKKVACGTQFSVALTKDGHV 4261
Score = 234 (87.4 bits), Expect = 4.8e-16, P = 4.8e-16
Identities = 79/231 (34%), Positives = 116/231 (50%)
Query: 122 HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQ-VSASENHAAFV 178
HTL + VFS G G LGHG +TQ + + I P VV VSA H+A V
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAGYRHSAAV 526
Query: 179 LQSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH- 236
+ G+++T G+ GH D+N R I P LV+ + V +V+ G + T L+ G
Sbjct: 527 TEDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNVG--EVSCGSSHTIALSKDGRT 582
Query: 237 VHTCGSNTH-GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
V + G + G+LGHGDT PK + L+ + + ++ AG LA+T G VY++G
Sbjct: 583 VWSFGGGDNVGKLGHGDTNRVYKPKVVEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGC 641
Query: 296 GSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV--VALDSSGY 343
G+ CLG G L+P+ I+ +V +S GD HV +D+ Y
Sbjct: 642 GA--CLGCGSSEATALRPKLIEELA--ATRIVDISIGDSHVWLFVMDNEVY 688
Score = 187 (70.9 bits), Expect = 9.3e-11, Sum P(2) = 9.3e-11
Identities = 64/227 (28%), Positives = 105/227 (46%)
Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
+Q++ G H+ ++ S+ +F+ G+ G LG G + + + R+ + QV+
Sbjct: 4138 VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 4196
Query: 173 NHAAFVLQSGQ-VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
NH V G V+ GD G ++ P+ V+ L G+ K+V G F+ L
Sbjct: 4197 NHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKVDVLCGIGIKKVACGTQFSVAL 4255
Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNGVV 290
T GHV+T G + L G + P+ I L G V++ +A G + LA+ G V
Sbjct: 4256 TKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVL--AGVVIEDVAVGAEHTLALASTGDV 4313
Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
Y++GS S LG G + +P + + K I ++SAG H A
Sbjct: 4314 YAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIR--QISAGRCHSAA 4358
Score = 186 (70.5 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 63/228 (27%), Positives = 111/228 (48%)
Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
++ G H+ ++ + +++ G G LGHG ++ + T + ++V +VS +H
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIP-TLVK--DISNVGEVSCGSSH 572
Query: 175 AAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
+ + G+ F GDN GH DTNR +++P++VEAL+G+ ++V AG + L
Sbjct: 573 TIALSKDGRTVWSFGGGDNVGKL-GHGDTNR-VYKPKVVEALQGMFIRKVCAGSQSSLAL 630
Query: 232 TIRGHVHTCGSNTHGQLGHGDT-LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
T G V+ G LG G + PK I L +V I+ G S++ + V
Sbjct: 631 TSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAAT-RIVDISIGDSHVWLFVMDNEV 687
Query: 291 YSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVA 337
Y++G+ S G G + +P+ + GI + ++SAG H +A
Sbjct: 688 YAWGNNSMGQCGQGNSTGPITKPKKVSGL--DGIAIQQISAGTSHSLA 733
Score = 181 (68.8 bits), Expect = 6.9e-10, P = 6.9e-10
Identities = 69/247 (27%), Positives = 107/247 (43%)
Query: 103 SSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA 162
+SD T A I TG ++ V+ GS+ L G + ++F A
Sbjct: 347 ASDYSRTCASPDSIQTGDA-PIVSETCEVYVWGSNSSHQLVEGTQEKILQPKMALSFSDA 405
Query: 163 AHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLV-EALKGVPCKQ 220
Q + + FV+ + G V CG S G D+N +L E + + K+
Sbjct: 406 ----QTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSI--KK 459
Query: 221 VTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGSVVQ-IA 275
V++ G T G V + G +G+LGHG++ + PK I PL+ G VV ++
Sbjct: 460 VSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQ--GKVVVCVS 517
Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
AG + AVT +G +Y++G G LGHG+ + P ++ G VS G H
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSSHT 573
Query: 336 VALDSSG 342
+AL G
Sbjct: 574 IALSKDG 580
Score = 180 (68.4 bits), Expect = 6.0e-10, Sum P(2) = 6.0e-10
Identities = 52/187 (27%), Positives = 91/187 (48%)
Query: 160 PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
PS + QV +N FV+Q+ G V CG+ S G +++ + ++ AL+G
Sbjct: 4025 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSD-DLHVLTVISALQGFVV 4082
Query: 219 KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
Q+ G LT G V + G +G+LGHG++ + P+ I L+ VVQ++
Sbjct: 4083 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGE-EVVQMS 4141
Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
G + VT +G +++FG+G LG G ++ P + +G + +V+ G H
Sbjct: 4142 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4199
Query: 336 VALDSSG 342
+A+ + G
Sbjct: 4200 LAVSADG 4206
Score = 158 (60.7 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 46/175 (26%), Positives = 83/175 (47%)
Query: 115 QITTGRYHTLLISNS--SVFSCGSS-LCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS 171
+++ G HT+ +S +V+S G G LGHG +T + + + +V A
Sbjct: 565 EVSCGSSHTIALSKDGRTVWSFGGGDNVGKLGHG-DTNRVYKPKVVEALQGMFIRKVCAG 623
Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
+ + +GQV+ G + CG + RP+L+E L ++ G +
Sbjct: 624 SQSSLALTSTGQVYAWGCGACLGCGSSEATA--LRPKLIEELAATRIVDISIGDSHVWLF 681
Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVT 285
+ V+ G+N+ GQ G G++ T PK ++ L+ + ++ QI+AG S+ LA T
Sbjct: 682 VMDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI-AIQQISAGTSHSLAWT 735
Score = 139 (54.0 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 50/174 (28%), Positives = 77/174 (44%)
Query: 115 QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
Q+ G HTL +S S V++ G G LG G T + S +++ + +V+
Sbjct: 4191 QVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKVDVLCGIGIKKVACGT 4249
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
+ + + G V+T G + R N RP+ + L GV + V G T L
Sbjct: 4250 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHN--RPQQIPVLAGVVIEDVAVGAEHTLAL 4307
Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
G V+ GSN+ GQLG G T P + L+ ++ QI+AG + A T
Sbjct: 4308 ASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGK-NIRQISAGRCHSAAWT 4360
Score = 53 (23.7 bits), Expect = 1.9e-22, Sum P(2) = 1.9e-22
Identities = 20/66 (30%), Positives = 37/66 (56%)
Query: 10 IEELPSHLIFEILTSGRLSAVDLAH-LELTSKTFGGSHGLYPQKFRSLVDLAASQLCALH 68
++ LP + ++ T+ ++++ L L +T+ T+ L P+ +SL+DL SQL L
Sbjct: 1797 LQLLPKTGVSQLSTALKVASTRLLQILAITTGTYADK--LSPKVVQSLLDLLCSQLKNLL 1854
Query: 69 SIYAGM 74
S AG+
Sbjct: 1855 S-QAGV 1859
>UNIPROTKB|E1C4H7 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] Pfam:PF00632 InterPro:IPR017986
InterPro:IPR000569 InterPro:IPR001680 InterPro:IPR003877
InterPro:IPR015880 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00622
PROSITE:PS50082 PROSITE:PS50237 PROSITE:PS50294 SMART:SM00119
SMART:SM00320 SMART:SM00355 INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008270 GO:GO:0016567 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 SUPFAM:SSF56204
OMA:HHYQDGI GeneTree:ENSGT00700000104312 EMBL:AADN02040444
EMBL:AADN02040445 EMBL:AADN02040446 IPI:IPI00593079
Ensembl:ENSGALT00000005344 Uniprot:E1C4H7
Length = 4863
Score = 278 (102.9 bits), Expect = 3.4e-22, P = 3.4e-22
Identities = 73/235 (31%), Positives = 124/235 (52%)
Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
I G+Y T +IS + SV +CG G LG G Q + ++ F + +VS+S
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466
Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
+ H G+VF+ GD GH +++ + P+L++ L+G V+AG +
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525
Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
+T G ++T G G+LGHGD+ R P + + VG +++ G S+ +A++ +G
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582
Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
V+SFG G N LGHG+ + +P+ I+ + G+ + +V AG + +AL S+G V
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQ--GMFIRKVCAGSQSSLALTSTGQV 635
Score = 258 (95.9 bits), Expect = 3.9e-22, Sum P(2) = 3.9e-22
Identities = 72/235 (30%), Positives = 122/235 (51%)
Query: 115 QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
Q+ G+ T +I +N +V +CG G LG G V T I+ V Q+
Sbjct: 4031 QVVCGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4089
Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
S+ H+ + +SG+VF+ GD GH +++R RPR +EAL+G Q++ G +
Sbjct: 4090 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQR-RPRQIEALQGEEVVQMSCGFKHSAV 4148
Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
+T G + T G+ +G+LG G+T ++ P+ + LE + Q+A G ++ +AV+ +G +
Sbjct: 4149 VTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY-QIGQVACGLNHTVAVSTDGSM 4207
Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
V++FG G LG G + P+ + GI + +V+ G + VAL G+V
Sbjct: 4208 VWAFGDGDYGKLGLGNSTAKSSPQKVDILC--GIGIKKVACGTQFSVALTKDGHV 4260
Score = 248 (92.4 bits), Expect = 5.8e-18, P = 5.8e-18
Identities = 80/229 (34%), Positives = 115/229 (50%)
Query: 122 HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQ-VSASENHAAFV 178
HTL + VFS G G LGHG +TQ + + I P VV VSA H+A V
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAGYRHSAAV 526
Query: 179 LQSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH- 236
+ G+++T G+ GH D+N R I P LV+ + V +V+ G + T L+ G
Sbjct: 527 TEDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNVG--EVSCGSSHTIALSKDGRT 582
Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
V + G +G+LGHGDT PK I L+ + + ++ AG LA+T G VY++G G
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCG 641
Query: 297 SNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
+ CLG G L+P+ I+ +V +S GD H +AL V
Sbjct: 642 A--CLGCGSSEATALRPKLIEELA--ATRIVDISIGDSHCLALSHDNEV 686
Score = 202 (76.2 bits), Expect = 3.0e-12, P = 3.0e-12
Identities = 63/228 (27%), Positives = 114/228 (50%)
Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
++ G H+ ++ + +++ G G LGHG ++ + T + ++V +VS +H
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIP-TLVK--DISNVGEVSCGSSH 572
Query: 175 AAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
+ + G+ F GDN GH DTNR +++P+++EAL+G+ ++V AG + L
Sbjct: 573 TIALSKDGRTVWSFGGGDNGKL--GHGDTNR-VYKPKVIEALQGMFIRKVCAGSQSSLAL 629
Query: 232 TIRGHVHTCGSNTHGQLGHGDT-LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
T G V+ G LG G + PK I L +V I+ G S+ LA++ + V
Sbjct: 630 TSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAAT-RIVDISIGDSHCLALSHDNEV 686
Query: 291 YSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVA 337
Y++G+ S G G + +P+ + G+ + ++SAG H +A
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGL--DGVSIQQISAGTSHSLA 732
Score = 184 (69.8 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 60/215 (27%), Positives = 100/215 (46%)
Query: 134 CGSSLCGVLGHGP--ETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQS-GQVFTCGDN 190
C L G HG E + V + PS + QV +N FV+Q+ G V CG+
Sbjct: 3997 CDVYLWGAGRHGQLAEAGRNV-MVPVAAPSFSQAQQVVCGQN-CTFVIQANGTVLACGEG 4054
Query: 191 SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF---LTIRGHVHTCGSNTHGQ 247
S G +++ + ++ AL+G Q+ G LT G V + G +G+
Sbjct: 4055 SYGRLGQGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4113
Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 307
LGHG++ + P+ I L+ VVQ++ G + VT +G +++FG+G LG G
Sbjct: 4114 LGHGNSDRQRRPRQIEALQGE-EVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTS 4172
Query: 308 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
++ P + +G + +V+ G H VA+ + G
Sbjct: 4173 NKKLPERVTAL--EGYQIGQVACGLNHTVAVSTDG 4205
Score = 184 (69.8 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 70/247 (28%), Positives = 111/247 (44%)
Query: 103 SSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA 162
+SD T A I TG ++ V+ GS+ L G T + + ++ PS
Sbjct: 347 ASDYSRTCASPDSIQTGDA-PIVSETCEVYVWGSNSSHQLVEG--TQEKILQPKLA-PSF 402
Query: 163 AHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLV-EALKGVPCKQ 220
+ + A + + FV+ + G V CG S G D+N +L E + + K+
Sbjct: 403 SDAQTIEAGQ-YCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSI--KK 459
Query: 221 VTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGSVVQ-IA 275
V++ G T G V + G +G+LGHG++ + PK I PL+ G VV ++
Sbjct: 460 VSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQ--GKVVVCVS 517
Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
AG + AVT +G +Y++G G LGHG+ + P ++ G VS G H
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSSHT 573
Query: 336 VALDSSG 342
+AL G
Sbjct: 574 IALSKDG 580
Score = 182 (69.1 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 63/228 (27%), Positives = 105/228 (46%)
Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
+Q++ G H+ +++ + +F+ G+ G LG G + + + R+ + QV+
Sbjct: 4137 VQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 4195
Query: 173 NHAAFVLQSGQ-VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
NH V G V+ GD G ++ P+ V+ L G+ K+V G F+ L
Sbjct: 4196 NHTVAVSTDGSMVWAFGDGDYGKLGLGNSTAKS-SPQKVDILCGIGIKKVACGTQFSVAL 4254
Query: 232 TIRGHVHTCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
T GHV+T G + +G G + P+ + L V + IA G + LA++ G
Sbjct: 4255 TKDGHVYTFGQVSDRLIGLPEGRARNHNRPQQVPVLSGV-FIEDIAVGAEHTLALSSTGD 4313
Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
VY++GS S LG G + +P I + K I ++SAG H A
Sbjct: 4314 VYAWGSNSEGQLGLGHTNHVREPTLITVLQGKNIR--QISAGRCHSAA 4359
Score = 165 (63.1 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 50/174 (28%), Positives = 84/174 (48%)
Query: 115 QITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
+++ G HT+ +S +V+S G G LGHG +T + I + +V A
Sbjct: 565 EVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEALQGMFIRKVCAGS 623
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
+ + +GQV+ G + CG + RP+L+E L ++ G + L+
Sbjct: 624 QSSLALTSTGQVYAWGCGACLGCGSSEATA--LRPKLIEELAATRIVDISIGDSHCLALS 681
Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVT 285
V+ G+N+ GQ G G++ T PK ++ L+ V S+ QI+AG S+ LA T
Sbjct: 682 HDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGV-SIQQISAGTSHSLAWT 734
Score = 145 (56.1 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 51/174 (29%), Positives = 79/174 (45%)
Query: 115 QITTGRYHTLLISN--SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
Q+ G HT+ +S S V++ G G LG G T + S +++ + +V+
Sbjct: 4190 QVACGLNHTVAVSTDGSMVWAFGDGDYGKLGLGNSTAKS-SPQKVDILCGIGIKKVACGT 4248
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
+ + + G V+T G S G + R RP+ V L GV + + G T L
Sbjct: 4249 QFSVALTKDGHVYTFGQVSDRLIGLPEGRARNHNRPQQVPVLSGVFIEDIAVGAEHTLAL 4308
Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
+ G V+ GSN+ GQLG G T P I L+ ++ QI+AG + A T
Sbjct: 4309 SSTGDVYAWGSNSEGQLGLGHTNHVREPTLITVLQGK-NIRQISAGRCHSAAWT 4361
Score = 127 (49.8 bits), Expect = 0.00063, P = 0.00063
Identities = 33/122 (27%), Positives = 57/122 (46%)
Query: 106 IVETSAGNM--QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA 162
++E G ++ G +L L S V++ G C LG G + I +A
Sbjct: 607 VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAA 664
Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
+V +S ++H + +V+ G+NS CG ++ PI +P+ V L GV +Q++
Sbjct: 665 TRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVSIQQIS 724
Query: 223 AG 224
AG
Sbjct: 725 AG 726
Score = 54 (24.1 bits), Expect = 3.9e-22, Sum P(2) = 3.9e-22
Identities = 21/66 (31%), Positives = 37/66 (56%)
Query: 10 IEELPSHLIFEILTSGRLSAVDLAH-LELTSKTFGGSHGLYPQKFRSLVDLAASQLCALH 68
++ LP I ++ T+ ++++ L L +T+ T+ L P+ +SL+DL SQL L
Sbjct: 1796 LQLLPKTGISQLSTALKVASTRLLQILAITTGTYADK--LSPKVVQSLLDLLCSQLKNLL 1853
Query: 69 SIYAGM 74
S AG+
Sbjct: 1854 S-QAGV 1858
>UNIPROTKB|F1NCH3 [details] [associations]
symbol:HERC4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
OMA:KLVIQPT EMBL:AADN02028016 IPI:IPI00586918
Ensembl:ENSGALT00000006135 ArrayExpress:F1NCH3 Uniprot:F1NCH3
Length = 1048
Score = 257 (95.5 bits), Expect = 9.0e-21, P = 9.0e-21
Identities = 71/232 (30%), Positives = 112/232 (48%)
Query: 116 ITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
++ G HTL +++ V++ G + G LG P T +C+ R I S +VQV+
Sbjct: 89 VSCGEAHTLALNDKGQVYAWGLATDGQLGL-PGTEECIRVPRNIKSLSEIQIVQVACGYY 147
Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
H+ + + +VF+ G N G + P ++++L G+P Q+ AG + LT+
Sbjct: 148 HSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTL 207
Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
G + G N GQLG D DR P + L VV I G + A+T G V++F
Sbjct: 208 SGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLR-TQKVVHICCGEDHTAALTKEGGVFTF 266
Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYV 344
G+G LGH E+ PR + F G V +++ G +H A + SSG +
Sbjct: 267 GAGGYGQLGHNSTSHEINPRKV--FELMGSLVTQITCGRQHTTAFVPSSGRI 316
Score = 218 (81.8 bits), Expect = 6.9e-15, P = 6.9e-15
Identities = 67/206 (32%), Positives = 97/206 (47%)
Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
+Q+ G YH+L +S S VFS G + G LG G E + S I Q++A
Sbjct: 140 VQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGG 199
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
H+ + SG +F G N G D N + P L+++L+ + G + T LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDDNDR-YVPTLLKSLRTQKVVHICCGEDHTAALT 258
Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
G V T G+ +GQLGH T P+ + E +GS+V QI G + A V +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSLVTQITCGRQHTTAFVPSSGRI 316
Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
YSFG G N LG G + P ++
Sbjct: 317 YSFGLGGNGQLGTGTTSNRKSPFTVK 342
Score = 199 (75.1 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 62/228 (27%), Positives = 104/228 (45%)
Query: 119 GRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 177
G HT+ + + +V++CG + G LGH + + A ++V VS E H
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKARKRP---EHVGALDAQNIVAVSCGEAHTLA 98
Query: 178 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
+ GQV+ G + G T I PR +++L + QV G + L+ V
Sbjct: 99 LNDKGQVYAWGLATDGQLGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEV 158
Query: 238 HTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
+ G N +GQLG G + + +P I L + QIAAG ++ +T +G ++ +G
Sbjct: 159 FSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGI-PFAQIAAGGAHSFVLTLSGAIFGWGRN 217
Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
LG + +D P +++ R + VV + G++H AL G V
Sbjct: 218 KFGQLGLNDDNDRYVPTLLKSLRTQ--KVVHICCGEDHTAALTKEGGV 263
Score = 188 (71.2 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 66/213 (30%), Positives = 94/213 (44%)
Query: 135 GSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
G++ G LG G + V R +F + V H FVL G V+TCG N
Sbjct: 5 GNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64
Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 253
GH + RP V AL V+ G T L +G V+ G T GQLG T
Sbjct: 65 QLGHEKARK---RPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLPGT 121
Query: 254 LDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
+ P++I L E+ +VQ+A G + LA++ V+S+G LG G E +
Sbjct: 122 EECIRVPRNIKSLSEI-QIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNS 180
Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
P I++ GI +++AG H L SG +
Sbjct: 181 PHVIKSLL--GIPFAQIAAGGAHSFVLTLSGAI 211
Score = 168 (64.2 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 58/219 (26%), Positives = 102/219 (46%)
Query: 50 PQKFRSLVDLAASQL-CAL-HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIV 107
P+ +SL ++ Q+ C HS+ +S+ ++ + N + L + ++S ++
Sbjct: 128 PRNIKSLSEIQIVQVACGYYHSL--ALSKGSEVFSWGQ-NKYGQLGLGYEYKKQNSPHVI 184
Query: 108 ETSAGN--MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH 164
++ G QI G H+ +++ S ++F G + G LG + + V T +
Sbjct: 185 KSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVP-TLLKSLRTQK 243
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
VV + E+H A + + G VFT G GH T+ I PR V L G Q+T G
Sbjct: 244 VVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKVFELMGSLVTQITCG 302
Query: 225 LNFT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
T F+ G +++ G +GQLG G T +R +P ++
Sbjct: 303 RQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPFTV 341
Score = 152 (58.6 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 49/161 (30%), Positives = 76/161 (47%)
Query: 187 CGDNSSFC-CGHRDTNRPI-FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
C N+SF G + I PR + + V GL T F+ G V+TCG N
Sbjct: 3 CWGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGCND 62
Query: 245 HGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG-H 303
GQLGH R P+ + L+ ++V ++ G ++ LA+ G VY++G ++ LG
Sbjct: 63 LGQLGHEKA--RKRPEHVGALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLP 119
Query: 304 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
G + PR I++ I +V+V+ G H +AL V
Sbjct: 120 GTEECIRVPRNIKSLSE--IQIVQVACGYYHSLALSKGSEV 158
>UNIPROTKB|E1BW48 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0020037
"heme binding" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] [GO:0032183 "SUMO binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR009060 InterPro:IPR010606
Pfam:PF00173 Pfam:PF00569 Pfam:PF06701 PROSITE:PS01357
PROSITE:PS50135 PROSITE:PS50237 PROSITE:PS50255 PROSITE:PS51416
SMART:SM00119 SMART:SM00291 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005743 GO:GO:0046872 GO:GO:0008270
GO:GO:0006281 GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.10.120.10 SUPFAM:SSF55856
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256
PROSITE:PS51284 SUPFAM:SSF46934 Gene3D:2.30.30.30
InterPro:IPR021097 InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 OMA:QLAFTRD EMBL:AADN02017653
IPI:IPI00571031 Ensembl:ENSGALT00000027018 ArrayExpress:E1BW48
Uniprot:E1BW48
Length = 4841
Score = 261 (96.9 bits), Expect = 2.2e-20, P = 2.2e-20
Identities = 84/301 (27%), Positives = 141/301 (46%)
Query: 50 PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
P + L +L Q+ + +SRN ++ N + + +QS+ S +IV+
Sbjct: 443 PIQCEGLANLGVVQIACAEKRFLILSRNGRV-YTQAYNSDTLGP-QLVQSLA-SRNIVKI 499
Query: 110 SAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG---P-ETTQCVSFTRINFPSAAHV 165
+A + G ++ L +N VFS G G LGHG P E + +S + HV
Sbjct: 500 AAHS----DGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLISALS-GKQAGKHV 554
Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
V ++ ++A + G+++T G + GH + P LV LKG+ V+ G
Sbjct: 555 VHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTI-PMLVTGLKGLKVIDVSCGS 613
Query: 226 NFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
L + G V + G +G+LG G + TPK I L+++ +V++ G + +A
Sbjct: 614 GDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DIVKVRCGSQFSIA 672
Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
+T +G VY++G G N LGHG + P+ ++ KG V+ V+AG H +AL
Sbjct: 673 LTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGL--KGKKVIDVAAGSTHCLALTEDSE 730
Query: 344 V 344
V
Sbjct: 731 V 731
Score = 248 (92.4 bits), Expect = 5.8e-18, P = 5.8e-18
Identities = 74/248 (29%), Positives = 117/248 (47%)
Query: 97 LQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR 156
L+S++H ++ A N + G++ L S V+S G + G LGHG + C
Sbjct: 4036 LESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRV 4089
Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
I VV ++A H+A + +G +FT G GH D+ + +P+LVEAL+G
Sbjct: 4090 IESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQL-KPKLVEALQGY 4148
Query: 217 PCKQVTAGLNF--TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 274
+ G T LT V + G +G+LG G + P I L ++G VV++
Sbjct: 4149 RVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTDLG-VVKV 4207
Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 334
G + +A+T +G VY++G G LGHG +PR +Q + K V+ ++ G H
Sbjct: 4208 ECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGK--KVIAIATGSLH 4265
Query: 335 VVALDSSG 342
V G
Sbjct: 4266 CVCCTEDG 4273
Score = 236 (88.1 bits), Expect = 2.7e-16, P = 2.7e-16
Identities = 71/228 (31%), Positives = 106/228 (46%)
Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
GR+ L + +FS G G LGH C I + ++ +H+A +
Sbjct: 3060 GRHAMALTVDGKIFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAI 3118
Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
SG+++T G GH D N +P++V+ L G QV G T LT G
Sbjct: 3119 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3177
Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
V + G G+LG G + P++I L G V QI G + LA+T +GVV+++G G
Sbjct: 3178 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3236
Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
F LGHG +P+ ++ R K I V V+ G H +A+ +G V
Sbjct: 3237 DYFRLGHGTDVHVRKPQVVEGLRGKKI--VHVAVGALHCLAVTDTGQV 3282
Score = 226 (84.6 bits), Expect = 4.6e-15, P = 4.6e-15
Identities = 69/224 (30%), Positives = 109/224 (48%)
Query: 127 SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV----VQVSASENHAAFVLQSG 182
++ +++ G G LG G T+ VS T S HV V V++ H + G
Sbjct: 4007 ADGKLYATGYGAGGRLGIGG--TESVS-TPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4063
Query: 183 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
+V++ G+ GH + + P RPR++E+L+G+ + AG + +T G + T G
Sbjct: 4064 EVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGK 4122
Query: 243 NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLAVTGNGVVYSFGSGSNFC 300
+G+LGHGD+ D+ PK + L+ V+ IA +G + L +T + V+S+G G
Sbjct: 4123 GRYGRLGHGDSEDQLKPKLVEALQGY-RVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 4181
Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
LG G P I + G VV+V G + VAL SG V
Sbjct: 4182 LGRGGSDGCKVPMKIDSLTDLG--VVKVECGSQFSVALTKSGAV 4223
Score = 221 (82.9 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 73/246 (29%), Positives = 120/246 (48%)
Query: 108 ET-SAGNM-QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH 164
ET SA N+ Q+ G ++ V++CG + G LG G ++ V R + +
Sbjct: 2991 ETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSNY 3049
Query: 165 VVQ---VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
VV+ V + HA + G++F+ G+ GH + +PRL+EALK + +
Sbjct: 3050 VVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDI 3108
Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGP-- 278
G + + +T G ++T G +G+LGHGD + PK + L +G V+Q+A G
Sbjct: 3109 ACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRD 3166
Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
+ LA+T G+V+S+G G LG G P+ I+ +G V ++ G + +AL
Sbjct: 3167 AQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG--VCQIECGAQFSLAL 3224
Query: 339 DSSGYV 344
SG V
Sbjct: 3225 TKSGVV 3230
Score = 200 (75.5 bits), Expect = 4.9e-12, P = 4.9e-12
Identities = 66/225 (29%), Positives = 100/225 (44%)
Query: 116 ITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
I G H+ I++S +++ G G LGHG TTQ + + V+QV+
Sbjct: 3108 IACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3166
Query: 175 AAFVL--QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
A + G VF+ GD G R + P+ +E L G Q+ G F+ LT
Sbjct: 3167 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3225
Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
G V T G + +LGHG + P+ + L +V +A G + LAVT G VY+
Sbjct: 3226 KSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGK-KIVHVAVGALHCLAVTDTGQVYA 3284
Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
+G + G+G +P +Q +G + RV+ G H VA
Sbjct: 3285 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3327
Score = 174 (66.3 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 54/206 (26%), Positives = 97/206 (47%)
Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
+ +++ G + G LG G E + T + VQ+ E V G+++
Sbjct: 3956 SGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4014
Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTH 245
G + G T + P L+E+++ V K+V +G L+ G V++ G
Sbjct: 4015 GYGAGGRLGIGGTES-VSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4073
Query: 246 GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
G+LGHG+ P+ I L + VV IAAG ++ +T G ++++G G LGHG+
Sbjct: 4074 GKLGHGNRSPCDRPRVIESLRGI-EVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGD 4132
Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAG 331
D+L+P+ ++ + G V+ ++ G
Sbjct: 4133 SEDQLKPKLVEALQ--GYRVIDIACG 4156
Score = 173 (66.0 bits), Expect = 5.4e-09, P = 5.4e-09
Identities = 61/224 (27%), Positives = 101/224 (45%)
Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF--V 178
Y + + +++ G G LGHG Q + + V+ VS A V
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPML-VTGLKGLKVIDVSCGSGDAQTLAV 621
Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
++GQV++ GD G R + P+L+E L+ + +V G F+ LT G V+
Sbjct: 622 TENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVY 680
Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
T G + +LGHG PK + L+ V+ +AAG ++ LA+T + V+S+GS
Sbjct: 681 TWGKGDNQRLGHGTEEHVRYPKLLEGLKGK-KVIDVAAGSTHCLALTEDSEVHSWGSNDQ 739
Query: 299 FCLGHGE--QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
C H + + + +P A+ K H+V ++ G A S
Sbjct: 740 -CQ-HFDTLRITKPEPAALPGLDTK--HIVGIACGPAQSFAWSS 779
Score = 169 (64.5 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 52/180 (28%), Positives = 88/180 (48%)
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
+V+ A+ +A +++ +VF G N G ++ I P E L + QV G
Sbjct: 2947 LVRKKAAGLESAATIRT-KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGG 3004
Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEE-VGSVVQIAAGPSYML 282
+T+ G V+ CG T+G+LG G + P P+ I L V V + +G + +
Sbjct: 3005 SKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAM 3064
Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
A+T +G ++S+G G + LGH + + +PR I+ + K I ++ G H A+ SSG
Sbjct: 3065 ALTVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAAITSSG 3122
Score = 162 (62.1 bits), Expect = 8.9e-08, P = 8.9e-08
Identities = 65/262 (24%), Positives = 112/262 (42%)
Query: 84 NRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLG 143
NR + RV+ L+ +E +V+ +AG G + + + +F+ G G LG
Sbjct: 4080 NRSPCDRPRVIESLRGIE----VVDIAAG------GAHSACITAAGDLFTWGKGRYGRLG 4129
Query: 144 HGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ--VFTCGDNSSFCCGHRDTN 201
HG Q + + V+ ++ A + + V++ GD G R +
Sbjct: 4130 HGDSEDQ-LKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG-RGGS 4187
Query: 202 RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 261
P +++L + +V G F+ LT G V+T G + +LGHG P+
Sbjct: 4188 DGCKVPMKIDSLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQ 4247
Query: 262 IAPLEEVGSVVQIAAGPSYMLAVT--GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
+ L+ V+ IA G + + T G G VY++G LG G + +PR + +
Sbjct: 4248 VQGLQGK-KVIAIATGSLHCVCCTEDGLGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQ 4306
Query: 320 RKGIHVVRVSAGDEHVVALDSS 341
K I+ RV+ G H +A +S
Sbjct: 4307 GKKIN--RVACGSAHTLAWSTS 4326
Score = 153 (58.9 bits), Expect = 8.8e-07, P = 8.8e-07
Identities = 47/163 (28%), Positives = 77/163 (47%)
Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
SG ++ G N G + + + P EAL + Q+ G +T G ++
Sbjct: 3956 SGTIYGWGHNHRGQLGGIEGAK-VKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4014
Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
G G+LG G T TP + ++ V V + +G + LA++ G VYS+G +
Sbjct: 4015 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4074
Query: 300 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
LGHG + +PR I++ R GI VV ++AG H + ++G
Sbjct: 4075 KLGHGNRSPCDRPRVIESLR--GIEVVDIAAGGAHSACITAAG 4115
Score = 153 (58.9 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 49/164 (29%), Positives = 74/164 (45%)
Query: 123 TLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQS 181
TL +++ VFS G G LG G + C I + V Q+ + + +S
Sbjct: 3169 TLALTDEGLVFSWGDGDFGKLGRGG-SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKS 3227
Query: 182 GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 241
G V+T G F GH T+ + +P++VE L+G V G +T G V+ G
Sbjct: 3228 GVVWTWGKGDYFRLGH-GTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWG 3286
Query: 242 SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
N HGQ G+G T P + LE + ++A G S+ +A T
Sbjct: 3287 DNDHGQQGNGTTTVNRKPTLVQGLEGQ-KITRVACGSSHSVAWT 3329
Score = 153 (58.9 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 55/181 (30%), Positives = 81/181 (44%)
Query: 106 IVETSAGNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH 164
+++ S G+ G TL ++ N V+S G G LG G + C + I
Sbjct: 606 VIDVSCGS-----GDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDGCKTPKLIEKLQDLD 659
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
+V+V + + + GQV+T G + GH T + P+L+E LKG V AG
Sbjct: 660 IVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGH-GTEEHVRYPKLLEGLKGKKVIDVAAG 718
Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYML 282
LT VH+ GSN Q H DTL +P P ++ L+ +V IA GP+
Sbjct: 719 STHCLALTEDSEVHSWGSNDQCQ--HFDTLRITKPEPAALPGLD-TKHIVGIACGPAQSF 775
Query: 283 A 283
A
Sbjct: 776 A 776
Score = 129 (50.5 bits), Expect = 0.00038, P = 0.00038
Identities = 37/113 (32%), Positives = 57/113 (50%)
Query: 235 GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
G ++ G N GQLG G + PTP +++A L V Q+ G + AVT +G +Y
Sbjct: 3957 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4012
Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
+ G G+ LG G P +++ + I V V++G +H +AL S G V
Sbjct: 4013 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4065
Score = 40 (19.1 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 13/63 (20%), Positives = 27/63 (42%)
Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
+ L+ G+G +Y +G LG E P + + V++ G++ + A+
Sbjct: 3949 WTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAT--LRPVQLIGGEQTLFAVT 4006
Query: 340 SSG 342
+ G
Sbjct: 4007 ADG 4009
>UNIPROTKB|E1C8K2 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR009060 InterPro:IPR010606
Pfam:PF00173 Pfam:PF00569 Pfam:PF06701 PROSITE:PS01357
PROSITE:PS50135 PROSITE:PS50237 PROSITE:PS50255 PROSITE:PS51416
SMART:SM00119 SMART:SM00291 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0046872 GO:GO:0008270 GO:GO:0020037 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
SUPFAM:SSF46934 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 EMBL:AADN02017653 IPI:IPI00818548
Ensembl:ENSGALT00000036596 ArrayExpress:E1C8K2 Uniprot:E1C8K2
Length = 4841
Score = 261 (96.9 bits), Expect = 2.2e-20, P = 2.2e-20
Identities = 84/301 (27%), Positives = 141/301 (46%)
Query: 50 PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
P + L +L Q+ + +SRN ++ N + + +QS+ S +IV+
Sbjct: 443 PIQCEGLANLGVVQIACAEKRFLILSRNGRV-YTQAYNSDTLGP-QLVQSLA-SRNIVKI 499
Query: 110 SAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG---P-ETTQCVSFTRINFPSAAHV 165
+A + G ++ L +N VFS G G LGHG P E + +S + HV
Sbjct: 500 AAHS----DGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLISALS-GKQAGKHV 554
Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
V ++ ++A + G+++T G + GH + P LV LKG+ V+ G
Sbjct: 555 VHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTI-PMLVTGLKGLKVIDVSCGS 613
Query: 226 NFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
L + G V + G +G+LG G + TPK I L+++ +V++ G + +A
Sbjct: 614 GDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DIVKVRCGSQFSIA 672
Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
+T +G VY++G G N LGHG + P+ ++ KG V+ V+AG H +AL
Sbjct: 673 LTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGL--KGKKVIDVAAGSTHCLALTEDSE 730
Query: 344 V 344
V
Sbjct: 731 V 731
Score = 248 (92.4 bits), Expect = 5.8e-18, P = 5.8e-18
Identities = 74/248 (29%), Positives = 117/248 (47%)
Query: 97 LQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR 156
L+S++H ++ A N + G++ L S V+S G + G LGHG + C
Sbjct: 4036 LESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRV 4089
Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
I VV ++A H+A + +G +FT G GH D+ + +P+LVEAL+G
Sbjct: 4090 IESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQL-KPKLVEALQGY 4148
Query: 217 PCKQVTAGLNF--TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 274
+ G T LT V + G +G+LG G + P I L ++G VV++
Sbjct: 4149 RVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTDLG-VVKV 4207
Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 334
G + +A+T +G VY++G G LGHG +PR +Q + K V+ ++ G H
Sbjct: 4208 ECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGK--KVIAIATGSLH 4265
Query: 335 VVALDSSG 342
V G
Sbjct: 4266 CVCCTEDG 4273
Score = 236 (88.1 bits), Expect = 2.7e-16, P = 2.7e-16
Identities = 71/228 (31%), Positives = 106/228 (46%)
Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
GR+ L + +FS G G LGH C I + ++ +H+A +
Sbjct: 3060 GRHAMALTVDGKIFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAI 3118
Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
SG+++T G GH D N +P++V+ L G QV G T LT G
Sbjct: 3119 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3177
Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
V + G G+LG G + P++I L G V QI G + LA+T +GVV+++G G
Sbjct: 3178 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3236
Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
F LGHG +P+ ++ R K I V V+ G H +A+ +G V
Sbjct: 3237 DYFRLGHGTDVHVRKPQVVEGLRGKKI--VHVAVGALHCLAVTDTGQV 3282
Score = 226 (84.6 bits), Expect = 4.6e-15, P = 4.6e-15
Identities = 69/224 (30%), Positives = 109/224 (48%)
Query: 127 SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV----VQVSASENHAAFVLQSG 182
++ +++ G G LG G T+ VS T S HV V V++ H + G
Sbjct: 4007 ADGKLYATGYGAGGRLGIGG--TESVS-TPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4063
Query: 183 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
+V++ G+ GH + + P RPR++E+L+G+ + AG + +T G + T G
Sbjct: 4064 EVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGK 4122
Query: 243 NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLAVTGNGVVYSFGSGSNFC 300
+G+LGHGD+ D+ PK + L+ V+ IA +G + L +T + V+S+G G
Sbjct: 4123 GRYGRLGHGDSEDQLKPKLVEALQGY-RVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 4181
Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
LG G P I + G VV+V G + VAL SG V
Sbjct: 4182 LGRGGSDGCKVPMKIDSLTDLG--VVKVECGSQFSVALTKSGAV 4223
Score = 221 (82.9 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 73/246 (29%), Positives = 120/246 (48%)
Query: 108 ET-SAGNM-QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH 164
ET SA N+ Q+ G ++ V++CG + G LG G ++ V R + +
Sbjct: 2991 ETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSNY 3049
Query: 165 VVQ---VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
VV+ V + HA + G++F+ G+ GH + +PRL+EALK + +
Sbjct: 3050 VVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDI 3108
Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGP-- 278
G + + +T G ++T G +G+LGHGD + PK + L +G V+Q+A G
Sbjct: 3109 ACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRD 3166
Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
+ LA+T G+V+S+G G LG G P+ I+ +G V ++ G + +AL
Sbjct: 3167 AQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG--VCQIECGAQFSLAL 3224
Query: 339 DSSGYV 344
SG V
Sbjct: 3225 TKSGVV 3230
Score = 200 (75.5 bits), Expect = 4.9e-12, P = 4.9e-12
Identities = 66/225 (29%), Positives = 100/225 (44%)
Query: 116 ITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
I G H+ I++S +++ G G LGHG TTQ + + V+QV+
Sbjct: 3108 IACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3166
Query: 175 AAFVL--QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
A + G VF+ GD G R + P+ +E L G Q+ G F+ LT
Sbjct: 3167 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3225
Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
G V T G + +LGHG + P+ + L +V +A G + LAVT G VY+
Sbjct: 3226 KSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGK-KIVHVAVGALHCLAVTDTGQVYA 3284
Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
+G + G+G +P +Q +G + RV+ G H VA
Sbjct: 3285 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3327
Score = 174 (66.3 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 54/206 (26%), Positives = 97/206 (47%)
Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
+ +++ G + G LG G E + T + VQ+ E V G+++
Sbjct: 3956 SGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4014
Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTH 245
G + G T + P L+E+++ V K+V +G L+ G V++ G
Sbjct: 4015 GYGAGGRLGIGGTES-VSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4073
Query: 246 GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
G+LGHG+ P+ I L + VV IAAG ++ +T G ++++G G LGHG+
Sbjct: 4074 GKLGHGNRSPCDRPRVIESLRGI-EVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGD 4132
Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAG 331
D+L+P+ ++ + G V+ ++ G
Sbjct: 4133 SEDQLKPKLVEALQ--GYRVIDIACG 4156
Score = 173 (66.0 bits), Expect = 5.4e-09, P = 5.4e-09
Identities = 61/224 (27%), Positives = 101/224 (45%)
Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF--V 178
Y + + +++ G G LGHG Q + + V+ VS A V
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPML-VTGLKGLKVIDVSCGSGDAQTLAV 621
Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
++GQV++ GD G R + P+L+E L+ + +V G F+ LT G V+
Sbjct: 622 TENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVY 680
Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
T G + +LGHG PK + L+ V+ +AAG ++ LA+T + V+S+GS
Sbjct: 681 TWGKGDNQRLGHGTEEHVRYPKLLEGLKGK-KVIDVAAGSTHCLALTEDSEVHSWGSNDQ 739
Query: 299 FCLGHGE--QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
C H + + + +P A+ K H+V ++ G A S
Sbjct: 740 -CQ-HFDTLRITKPEPAALPGLDTK--HIVGIACGPAQSFAWSS 779
Score = 169 (64.5 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 52/180 (28%), Positives = 88/180 (48%)
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
+V+ A+ +A +++ +VF G N G ++ I P E L + QV G
Sbjct: 2947 LVRKKAAGLESAATIRT-KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGG 3004
Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEE-VGSVVQIAAGPSYML 282
+T+ G V+ CG T+G+LG G + P P+ I L V V + +G + +
Sbjct: 3005 SKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAM 3064
Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
A+T +G ++S+G G + LGH + + +PR I+ + K I ++ G H A+ SSG
Sbjct: 3065 ALTVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAAITSSG 3122
Score = 162 (62.1 bits), Expect = 8.9e-08, P = 8.9e-08
Identities = 65/262 (24%), Positives = 112/262 (42%)
Query: 84 NRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLG 143
NR + RV+ L+ +E +V+ +AG G + + + +F+ G G LG
Sbjct: 4080 NRSPCDRPRVIESLRGIE----VVDIAAG------GAHSACITAAGDLFTWGKGRYGRLG 4129
Query: 144 HGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ--VFTCGDNSSFCCGHRDTN 201
HG Q + + V+ ++ A + + V++ GD G R +
Sbjct: 4130 HGDSEDQ-LKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG-RGGS 4187
Query: 202 RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 261
P +++L + +V G F+ LT G V+T G + +LGHG P+
Sbjct: 4188 DGCKVPMKIDSLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQ 4247
Query: 262 IAPLEEVGSVVQIAAGPSYMLAVT--GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
+ L+ V+ IA G + + T G G VY++G LG G + +PR + +
Sbjct: 4248 VQGLQGK-KVIAIATGSLHCVCCTEDGLGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQ 4306
Query: 320 RKGIHVVRVSAGDEHVVALDSS 341
K I+ RV+ G H +A +S
Sbjct: 4307 GKKIN--RVACGSAHTLAWSTS 4326
Score = 153 (58.9 bits), Expect = 8.8e-07, P = 8.8e-07
Identities = 47/163 (28%), Positives = 77/163 (47%)
Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
SG ++ G N G + + + P EAL + Q+ G +T G ++
Sbjct: 3956 SGTIYGWGHNHRGQLGGIEGAK-VKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4014
Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
G G+LG G T TP + ++ V V + +G + LA++ G VYS+G +
Sbjct: 4015 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4074
Query: 300 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
LGHG + +PR I++ R GI VV ++AG H + ++G
Sbjct: 4075 KLGHGNRSPCDRPRVIESLR--GIEVVDIAAGGAHSACITAAG 4115
Score = 153 (58.9 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 49/164 (29%), Positives = 74/164 (45%)
Query: 123 TLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQS 181
TL +++ VFS G G LG G + C I + V Q+ + + +S
Sbjct: 3169 TLALTDEGLVFSWGDGDFGKLGRGG-SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKS 3227
Query: 182 GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 241
G V+T G F GH T+ + +P++VE L+G V G +T G V+ G
Sbjct: 3228 GVVWTWGKGDYFRLGH-GTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWG 3286
Query: 242 SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
N HGQ G+G T P + LE + ++A G S+ +A T
Sbjct: 3287 DNDHGQQGNGTTTVNRKPTLVQGLEGQ-KITRVACGSSHSVAWT 3329
Score = 153 (58.9 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 55/181 (30%), Positives = 81/181 (44%)
Query: 106 IVETSAGNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH 164
+++ S G+ G TL ++ N V+S G G LG G + C + I
Sbjct: 606 VIDVSCGS-----GDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDGCKTPKLIEKLQDLD 659
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
+V+V + + + GQV+T G + GH T + P+L+E LKG V AG
Sbjct: 660 IVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGH-GTEEHVRYPKLLEGLKGKKVIDVAAG 718
Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYML 282
LT VH+ GSN Q H DTL +P P ++ L+ +V IA GP+
Sbjct: 719 STHCLALTEDSEVHSWGSNDQCQ--HFDTLRITKPEPAALPGLD-TKHIVGIACGPAQSF 775
Query: 283 A 283
A
Sbjct: 776 A 776
Score = 129 (50.5 bits), Expect = 0.00038, P = 0.00038
Identities = 37/113 (32%), Positives = 57/113 (50%)
Query: 235 GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
G ++ G N GQLG G + PTP +++A L V Q+ G + AVT +G +Y
Sbjct: 3957 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4012
Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
+ G G+ LG G P +++ + I V V++G +H +AL S G V
Sbjct: 4013 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4065
Score = 40 (19.1 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 13/63 (20%), Positives = 27/63 (42%)
Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
+ L+ G+G +Y +G LG E P + + V++ G++ + A+
Sbjct: 3949 WTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAT--LRPVQLIGGEQTLFAVT 4006
Query: 340 SSG 342
+ G
Sbjct: 4007 ADG 4009
>UNIPROTKB|F1PB99 [details] [associations]
symbol:HERC5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:KDWITNT EMBL:AAEX03016753
EMBL:AAEX03016752 Ensembl:ENSCAFT00000015560 Uniprot:F1PB99
Length = 1025
Score = 255 (94.8 bits), Expect = 2.9e-20, P = 2.9e-20
Identities = 75/221 (33%), Positives = 110/221 (49%)
Query: 99 SVEHSS--DIVETSAGNMQITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVS 153
S+EH+S + +QIT G YH+L +S +F+ G +L G LG G T +
Sbjct: 121 SIEHASRFQCILQEKSIIQITCGDYHSLALSKGQGGELFAWGQNLHGQLGVGRLFTSIPT 180
Query: 154 FTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
+ S +VQ+SA + H+ + SG +++ G N G TN F P L+EAL
Sbjct: 181 PQLVEHLSGVPLVQISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTNGEDF-PSLIEAL 239
Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
+ + G + T LT G V T G+ +GQLGH T + P+ + L V Q
Sbjct: 240 DNQKVEFLACGGSHTALLTKDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAG-NRVTQ 298
Query: 274 IAAGPSY-MLA-VTGNGVVYSFGSGSNFCLGHGEQHDELQP 312
+A G + LA V+ G V+SFGSG LG+G H++L P
Sbjct: 299 VACGSRWHTLAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIP 339
Score = 210 (79.0 bits), Expect = 5.8e-14, P = 5.8e-14
Identities = 57/178 (32%), Positives = 92/178 (51%)
Query: 165 VVQVSASENHAAFVL--QSGQVFTCGDN--SSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
++Q++ + H+ + Q G++F G N G T+ P P+LVE L GVP Q
Sbjct: 137 IIQITCGDYHSLALSKGQGGELFAWGQNLHGQLGVGRLFTSIPT--PQLVEHLSGVPLVQ 194
Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
++AG + L++ G++++ G N GQLG G T P I L+ V +A G S+
Sbjct: 195 ISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTNGEDFPSLIEALDNQ-KVEFLACGGSH 253
Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE-HVVA 337
+T +G+V++FG+G LGH +EL+PR + G V +V+ G H +A
Sbjct: 254 TALLTKDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELA--GNRVTQVACGSRWHTLA 309
>TAIR|locus:2163986 [details] [associations]
symbol:UVR8 "UVB-RESISTANCE 8" species:3702 "Arabidopsis
thaliana" [GO:0005737 "cytoplasm" evidence=ISM] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=ISS]
[GO:0009411 "response to UV" evidence=IMP] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0010224 "response to UV-B"
evidence=IEP;IGI] [GO:0000785 "chromatin" evidence=IDA] [GO:0009649
"entrainment of circadian clock" evidence=IMP] [GO:0006007 "glucose
catabolic process" evidence=RCA] [GO:0042803 "protein
homodimerization activity" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005829 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009649 GO:GO:0000785 EMBL:AB007646
GO:GO:0003682 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005085 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0010224 eggNOG:COG5184 UniGene:At.49214
EMBL:AF130441 EMBL:AY125497 EMBL:BT000600 IPI:IPI00521473
PIR:T50662 RefSeq:NP_201191.1 PDB:4D9S PDB:4DNU PDB:4DNV PDB:4DNW
PDBsum:4D9S PDBsum:4DNU PDBsum:4DNV PDBsum:4DNW
ProteinModelPortal:Q9FN03 SMR:Q9FN03 DIP:DIP-59667N STRING:Q9FN03
PRIDE:Q9FN03 EnsemblPlants:AT5G63860.1 GeneID:836506
KEGG:ath:AT5G63860 TAIR:At5g63860 HOGENOM:HOG000240817
InParanoid:Q9FN03 OMA:GTLWCWG PhylomeDB:Q9FN03
ProtClustDB:CLSN2686209 Genevestigator:Q9FN03 Uniprot:Q9FN03
Length = 440
Score = 251 (93.4 bits), Expect = 3.9e-20, P = 3.9e-20
Identities = 71/229 (31%), Positives = 115/229 (50%)
Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
I+ G H++ L+S V S G G LGHG + S T+++ +V V+ +H
Sbjct: 20 ISAGASHSVALLSGDIVCSWGRGEDGQLGHG-DAEDRPSPTQLSALDGHQIVSVTCGADH 78
Query: 175 AAFVLQSG-QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
QSG +V++ G GH +++ +F P ++AL G+ KQ+ G + +T+
Sbjct: 79 TVAYSQSGMEVYSWGWGDFGRLGHGNSS-DLFTPLPIKALHGIRIKQIACGDSHCLAVTM 137
Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
G V + G N +GQLG GDT D P+ I E + + +AAG + AVT +G +Y +
Sbjct: 138 EGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGI-RIKMVAAGAEHTAAVTEDGDLYGW 196
Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
G G LG G++ D L P + + G + V+ G H +++ SG
Sbjct: 197 GWGRYGNLGLGDRTDRLVPERVTS--TGGEKMSMVACGWRHTISVSYSG 243
Score = 225 (84.3 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 65/180 (36%), Positives = 90/180 (50%)
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTA 223
V+ +SA +H+ +L V + G GH D +RP P + AL G VT
Sbjct: 17 VLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRP--SPTQLSALDGHQIVSVTC 74
Query: 224 GLNFTGFLTIRG-HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
G + T + G V++ G G+LGHG++ D TP I L + + QIA G S+ L
Sbjct: 75 GADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGI-RIKQIACGDSHCL 133
Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
AVT G V S+G N LG G+ D L P+ IQ F +GI + V+AG EH A+ G
Sbjct: 134 AVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAF--EGIRIKMVAAGAEHTAAVTEDG 191
Score = 199 (75.1 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 60/208 (28%), Positives = 94/208 (45%)
Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
+ G HT ++ + ++ G G LG G T + V R+ + V+ H
Sbjct: 177 VAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVP-ERVTSTGGEKMSMVACGWRH 235
Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
V SG ++T G + GH D + P +EAL Q++ G T LT
Sbjct: 236 TISVSYSGALYTYGWSKYGQLGHGDLEDHLI-PHKLEALSNSFISQISGGWRHTMALTSD 294
Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
G ++ G N GQ+G G+ LD+ +P + + VVQ++ G + LAVT V+++G
Sbjct: 295 GKLYGWGWNKFGQVGVGNNLDQCSPVQVR-FPDDQKVVQVSCGWRHTLAVTERNNVFAWG 353
Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKG 322
G+N LG GE D P+ I+ G
Sbjct: 354 RGTNGQLGIGESVDRNFPKIIEALSVDG 381
Score = 169 (64.5 bits), Expect = 6.8e-10, P = 6.8e-10
Identities = 41/125 (32%), Positives = 65/125 (52%)
Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
++AG + + L V + G GQLGHGD DRP+P ++ L+ +V + G +
Sbjct: 20 ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDG-HQIVSVTCGADH 78
Query: 281 MLAVTGNGV-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
+A + +G+ VYS+G G LGHG D P I+ GI + +++ GD H +A+
Sbjct: 79 TVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALH--GIRIKQIACGDSHCLAVT 136
Query: 340 SSGYV 344
G V
Sbjct: 137 MEGEV 141
Score = 133 (51.9 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 48/170 (28%), Positives = 78/170 (45%)
Query: 106 IVETSAGNMQ-ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA 163
+ T M + G HT+ +S S ++++ G S G LGHG + ++ S +
Sbjct: 218 VTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPH-KLEALSNS 276
Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCG---HRDTNRPIFRPRLVEALKGVPCKQ 220
+ Q+S H + G+++ G N G + D P+ + R + K V Q
Sbjct: 277 FISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPV-QVRFPDDQKVV---Q 332
Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 270
V+ G T +T R +V G T+GQLG G+++DR PK I L G+
Sbjct: 333 VSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALSVDGA 382
>RGD|1307803 [details] [associations]
symbol:Herc3 "HECT and RLD domain containing E3 ubiquitin
protein ligase 3" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] [GO:0005634
"nucleus" evidence=IBA] [GO:0005737 "cytoplasm" evidence=ISO;IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 RGD:1307803
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
SUPFAM:SSF56204 EMBL:CH474011 IPI:IPI00568958 UniGene:Rn.203362
Ensembl:ENSRNOT00000009694 UCSC:RGD:1307803 Uniprot:D3ZYI2
Length = 909
Score = 254 (94.5 bits), Expect = 4.5e-20, P = 4.5e-20
Identities = 76/234 (32%), Positives = 113/234 (48%)
Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
+ + G H+L +S+ +FS G+ G LG T V+ R I + ++QVS
Sbjct: 87 IHVACGESHSLALSDRGQLFSWGAGSDGQLGL-MTTEDSVAVPRLIQKLNQQTILQVSCG 145
Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
H + GQ FT G NS G P+ V +L+G+P QV AG + L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFAL 205
Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
++ G V G N GQLG D DR +P + L VV I+ G + +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264
Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYV 344
+FG+GS LGH +DE+ PR + G V +++ G +H +AL SSG +
Sbjct: 265 TFGAGSCGQLGHDSVNDEVNPRRV--LELMGSEVTQIACGRQHTLALVPSSGLI 316
Score = 249 (92.7 bits), Expect = 5.2e-19, P = 5.2e-19
Identities = 67/227 (29%), Positives = 109/227 (48%)
Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
G + L+ + V++CG + G LGH E + +I + H++ V+ E+H+ +
Sbjct: 43 GNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 99
Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
GQ+F+ G S G T + PRL++ L QV+ G L G
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159
Query: 239 TCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
T G N+HGQLG G T P+ + LE + + Q+AAG ++ A++ +G V+ +G +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQTSPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218
Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
LG ++ D P ++ R + VV +S G+EH L SG V
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGV 263
Score = 208 (78.3 bits), Expect = 8.3e-14, P = 8.3e-14
Identities = 64/194 (32%), Positives = 95/194 (48%)
Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
+Q++ G +H L L ++ F+ G + G LG G E S R+ + QV+A
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGG 199
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
H+ + SG VF G N++ G D + P V+ L+ ++ G T LT
Sbjct: 200 AHSFALSLSGAVFGWGMNNAGQLGLSD-EKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGNGVV 290
G V T G+ + GQLGH D P+ + LE +GS V QIA G + LA V +G++
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSVNDEVNPRRV--LELMGSEVTQIACGRQHTLALVPSSGLI 316
Query: 291 YSFGSGSNFCLGHG 304
Y+FG G+ LG G
Sbjct: 317 YAFGCGAKGQLGTG 330
Score = 207 (77.9 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 57/189 (30%), Positives = 101/189 (53%)
Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
F S + +V+ NH+ F+L+ G+V+TCG N+ GH R+ N+P + AL
Sbjct: 30 FVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKP----EQIGALADQH 85
Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
V G + + L+ RG + + G+ + GQLG T D P+ I L + +++Q++
Sbjct: 86 IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQ-TILQVSC 144
Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
G + LA+ +G +++G S+ LG G++ + P+ +++ +GI + +V+AG H
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSL--EGIPLAQVAAGGAHS 202
Query: 336 VALDSSGYV 344
AL SG V
Sbjct: 203 FALSLSGAV 211
Score = 181 (68.8 bits), Expect = 9.9e-11, P = 9.9e-11
Identities = 47/140 (33%), Positives = 77/140 (55%)
Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
+ P++ + K+V G N + FL G V+TCG NT GQLGH ++P + I
Sbjct: 22 VAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKP--EQIG 79
Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKG 322
L + ++ +A G S+ LA++ G ++S+G+GS+ LG D + PR IQ ++
Sbjct: 80 ALADQ-HIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQT 138
Query: 323 IHVVRVSAGDEHVVALDSSG 342
I ++VS G+ H +AL + G
Sbjct: 139 I--LQVSCGNWHCLALAADG 156
Score = 149 (57.5 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 46/150 (30%), Positives = 63/150 (42%)
Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
Q+ G H+ +S S +VF G + G LG E + S + VV +S E
Sbjct: 194 QVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDR-ESPCHVKLLRTQKVVYISCGEE 252
Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFLT 232
H A + +SG VFT G S GH N + PR V L G Q+ G T +
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSVNDEV-NPRRVLELMGSEVTQIACGRQHTLALVP 311
Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
G ++ G GQLG G T + P +
Sbjct: 312 SSGLIYAFGCGAKGQLGTGHTCNVKCPSPV 341
>UNIPROTKB|F1RW66 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:8916 KO:K10614 OMA:SPAVDFR
EMBL:FP015981 EMBL:CU915521 RefSeq:XP_003129374.3 UniGene:Ssc.42366
Ensembl:ENSSSCT00000010082 GeneID:100517903 KEGG:ssc:100517903
Uniprot:F1RW66
Length = 1050
Score = 254 (94.5 bits), Expect = 5.7e-20, P = 5.7e-20
Identities = 75/234 (32%), Positives = 114/234 (48%)
Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
+ + G H+L +S+ +FS G+ G LG T + V+ R I + ++QVS
Sbjct: 87 VHVACGESHSLALSDRGQLFSWGAGSDGQLGL-MTTEESVAVPRLIQKLNQQTILQVSCG 145
Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
H + GQ FT G NS G P+ V +L+G+P QV AG + L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205
Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
++ G V G N GQLG D DR +P + L VV I+ G + +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLR-AQKVVYISCGEEHTAVLTKSGGVF 264
Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYV 344
+FG+GS LGH +DE+ PR + G V +++ G +H +A + SSG +
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLI 316
Score = 251 (93.4 bits), Expect = 2.8e-19, P = 2.8e-19
Identities = 68/232 (29%), Positives = 114/232 (49%)
Query: 115 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
++ G H++ L+ + V++CG + G LGH E + +I + H+V V+ E+
Sbjct: 38 EVACGGDHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADEHIVHVACGES 94
Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
H+ + GQ+F+ G S G T + PRL++ L QV+ G L
Sbjct: 95 HSLALSDRGQLFSWGAGSDGQLGLMTTEESVAVPRLIQKLNQQTILQVSCGNWHCLALAA 154
Query: 234 RGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
G T G N+HGQLG G + +P+ + LE + + Q+AAG ++ A++ +G V+
Sbjct: 155 DGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFG 213
Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
+G + LG ++ D P ++ R + VV +S G+EH L SG V
Sbjct: 214 WGMNNAGQLGLSDEEDRESPCHVKLLRAQ--KVVYISCGEEHTAVLTKSGGV 263
Score = 208 (78.3 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 72/235 (30%), Positives = 108/235 (45%)
Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
+Q++ G +H L L ++ F+ G + G LG G E S R+ + QV+A
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGG 199
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
H+ + SG VF G N++ G D +R P V+ L+ ++ G T L
Sbjct: 200 AHSFALSLSGAVFGWGMNNAGQLGLSDEEDRE--SPCHVKLLRAQKVVYISCGEEHTAVL 257
Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGNGV 289
T G V T G+ + GQLGH D P+ + LE +GS V QIA G + LA V +G+
Sbjct: 258 TKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGL 315
Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTF--RRKGIHVVRVSAGDEHVVALDSSG 342
+Y+FG G+ LG G + P ++ + G R H+V SG
Sbjct: 316 IYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSG 370
Score = 198 (74.8 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 56/189 (29%), Positives = 101/189 (53%)
Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
F S V +V+ +H+ F+L+ G+V+TCG N+ GH R+ N+P + AL
Sbjct: 30 FISDRSVKEVACGGDHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP----EQIGALADEH 85
Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
V G + + L+ RG + + G+ + GQLG T + P+ I L + +++Q++
Sbjct: 86 IVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEESVAVPRLIQKLNQQ-TILQVSC 144
Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
G + LA+ +G +++G S+ LG G++ + P+ +++ +GI + +V+AG H
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 202
Query: 336 VALDSSGYV 344
AL SG V
Sbjct: 203 FALSLSGAV 211
Score = 172 (65.6 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 46/140 (32%), Positives = 77/140 (55%)
Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
+ P++ + K+V G + + FL G V+TCG NT GQLGH ++P + I
Sbjct: 22 VAEPQVCGFISDRSVKEVACGGDHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP--EQIG 79
Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKG 322
L + +V +A G S+ LA++ G ++S+G+GS+ LG + + PR IQ ++
Sbjct: 80 ALADE-HIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEESVAVPRLIQKLNQQT 138
Query: 323 IHVVRVSAGDEHVVALDSSG 342
I ++VS G+ H +AL + G
Sbjct: 139 I--LQVSCGNWHCLALAADG 156
>UNIPROTKB|E2RMB0 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:8916 KO:K10614 OMA:SPAVDFR
EMBL:AAEX03016754 EMBL:AAEX03016753 RefSeq:XP_535653.3
Ensembl:ENSCAFT00000015540 GeneID:478475 KEGG:cfa:478475
Uniprot:E2RMB0
Length = 1050
Score = 253 (94.1 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 75/234 (32%), Positives = 113/234 (48%)
Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
+ + G H+L +S+ +FS G+ G LG T V+ R I + ++QVS
Sbjct: 87 VHVACGESHSLALSDRGQLFSWGAGSDGQLGL-MTTEDSVAVPRLIQKLNQQTILQVSCG 145
Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
H + GQ FT G NS G P+ V +L+G+P QV AG + L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEYPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205
Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
++ G V G N GQLG D DR +P + L VV I+ G + +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264
Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYV 344
+FG+GS LGH +DE+ PR + G V +++ G +H +A + SSG +
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLI 316
Score = 249 (92.7 bits), Expect = 6.5e-19, P = 6.5e-19
Identities = 67/227 (29%), Positives = 110/227 (48%)
Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
G + L+ + V++CG + G LGH E + +I + H+V V+ E+H+ +
Sbjct: 43 GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIVHVACGESHSLAL 99
Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
GQ+F+ G S G T + PRL++ L QV+ G L G
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159
Query: 239 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
T G N+HGQLG G + +P+ + LE + + Q+AAG ++ A++ +G V+ +G +
Sbjct: 160 TWGKNSHGQLGLGKEYPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218
Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
LG ++ D P ++ R + VV +S G+EH L SG V
Sbjct: 219 AGQLGLSDEEDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGV 263
Score = 210 (79.0 bits), Expect = 6.0e-14, P = 6.0e-14
Identities = 58/189 (30%), Positives = 102/189 (53%)
Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
F S V +V+ NH+ F+L+ G+V+TCG N+ GH R+ N+P + AL
Sbjct: 30 FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP----EQIGALADQH 85
Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
V G + + L+ RG + + G+ + GQLG T D P+ I L + +++Q++
Sbjct: 86 IVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQ-TILQVSC 144
Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
G + LA+ +G +++G S+ LG G+++ + P+ +++ +GI + +V+AG H
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEYPSQASPQRVRSL--EGIPLAQVAAGGAHS 202
Query: 336 VALDSSGYV 344
AL SG V
Sbjct: 203 FALSLSGAV 211
Score = 206 (77.6 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 72/235 (30%), Positives = 108/235 (45%)
Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
+Q++ G +H L L ++ F+ G + G LG G E S R+ + QV+A
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEYPSQASPQRVRSLEGIPLAQVAAGG 199
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
H+ + SG VF G N++ G D +R P V+ L+ ++ G T L
Sbjct: 200 AHSFALSLSGAVFGWGMNNAGQLGLSDEEDRE--SPCHVKLLRTQKVVYISCGEEHTAVL 257
Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGNGV 289
T G V T G+ + GQLGH D P+ + LE +GS V QIA G + LA V +G+
Sbjct: 258 TKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGL 315
Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTF--RRKGIHVVRVSAGDEHVVALDSSG 342
+Y+FG G+ LG G + P ++ + G R H+V SG
Sbjct: 316 IYAFGCGAKGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSG 370
Score = 181 (68.8 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 48/140 (34%), Positives = 77/140 (55%)
Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
+ P++ + K+V G N + FL G V+TCG NT GQLGH ++P + I
Sbjct: 22 VAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP--EQIG 79
Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKG 322
L + +V +A G S+ LA++ G ++S+G+GS+ LG D + PR IQ ++
Sbjct: 80 ALADQ-HIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQT 138
Query: 323 IHVVRVSAGDEHVVALDSSG 342
I ++VS G+ H +AL + G
Sbjct: 139 I--LQVSCGNWHCLALAADG 156
>UNIPROTKB|Q15034 [details] [associations]
symbol:HERC3 "Probable E3 ubiquitin-protein ligase HERC3"
species:9606 "Homo sapiens" [GO:0016023 "cytoplasmic
membrane-bounded vesicle" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] [GO:0005634
"nucleus" evidence=IBA] [GO:0042787 "protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IBA] [GO:0005737 "cytoplasm" evidence=IDA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0016023 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 EMBL:CH471057 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
SUPFAM:SSF56204 eggNOG:COG5021 EMBL:D25215 EMBL:AK289990
IPI:IPI00014216 RefSeq:NP_001258531.1 RefSeq:NP_055421.1
UniGene:Hs.35804 ProteinModelPortal:Q15034 SMR:Q15034 IntAct:Q15034
MINT:MINT-158126 STRING:Q15034 PhosphoSite:Q15034 DMDM:2495699
PaxDb:Q15034 PRIDE:Q15034 DNASU:8916 Ensembl:ENST00000264345
Ensembl:ENST00000402738 GeneID:8916 KEGG:hsa:8916 UCSC:uc003hrw.1
CTD:8916 GeneCards:GC04P089444 HGNC:HGNC:4876 HPA:HPA039170
MIM:605200 neXtProt:NX_Q15034 PharmGKB:PA29251 HOGENOM:HOG000208452
HOVERGEN:HBG050878 InParanoid:Q15034 KO:K10614 OMA:SPAVDFR
OrthoDB:EOG4RBQHS PhylomeDB:Q15034 ChiTaRS:HERC3 GenomeRNAi:8916
NextBio:33540 ArrayExpress:Q15034 Bgee:Q15034 CleanEx:HS_HERC3
Genevestigator:Q15034 Uniprot:Q15034
Length = 1050
Score = 253 (94.1 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 75/234 (32%), Positives = 113/234 (48%)
Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
+ + G H+L +S+ +FS G+ G LG T V+ R I + ++QVS
Sbjct: 87 IHVACGESHSLALSDRGQLFSWGAGSDGQLGL-MTTEDSVAVPRLIQKLNQQTILQVSCG 145
Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
H + GQ FT G NS G P+ V +L+G+P QV AG + L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205
Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
++ G V G N GQLG D DR +P + L VV I+ G + +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264
Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYV 344
+FG+GS LGH +DE+ PR + G V +++ G +H +A + SSG +
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLI 316
Score = 248 (92.4 bits), Expect = 9.1e-19, P = 9.1e-19
Identities = 66/227 (29%), Positives = 110/227 (48%)
Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
G + L+ + V++CG + G LGH E + +I + H++ V+ E+H+ +
Sbjct: 43 GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 99
Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
GQ+F+ G S G T + PRL++ L QV+ G L G
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159
Query: 239 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
T G N+HGQLG G + +P+ + LE + + Q+AAG ++ A++ +G V+ +G +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218
Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
LG ++ D P ++ R + VV +S G+EH L SG V
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGV 263
Score = 208 (78.3 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 71/234 (30%), Positives = 107/234 (45%)
Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
+Q++ G +H L L ++ F+ G + G LG G E S R+ + QV+A
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGG 199
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
H+ + SG VF G N++ G D + P V+ L+ ++ G T LT
Sbjct: 200 AHSFALSLSGAVFGWGMNNAGQLGLSD-EKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGNGVV 290
G V T G+ + GQLGH D P+ + LE +GS V QIA G + LA V +G++
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLI 316
Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTF--RRKGIHVVRVSAGDEHVVALDSSG 342
Y+FG G+ LG G + P ++ + G R H+V SG
Sbjct: 317 YAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSG 370
Score = 206 (77.6 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 58/189 (30%), Positives = 101/189 (53%)
Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
F S V +V+ NH+ F+L+ G+V+TCG N+ GH R+ N+P + AL
Sbjct: 30 FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP----EQIGALADQH 85
Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
V G + + L+ RG + + G+ + GQLG T D P+ I L + +++Q++
Sbjct: 86 IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQ-TILQVSC 144
Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
G + LA+ +G +++G S+ LG G++ + P+ +++ +GI + +V+AG H
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 202
Query: 336 VALDSSGYV 344
AL SG V
Sbjct: 203 FALSLSGAV 211
Score = 180 (68.4 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 47/140 (33%), Positives = 77/140 (55%)
Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
+ P++ + K+V G N + FL G V+TCG NT GQLGH ++P + I
Sbjct: 22 VAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP--EQIG 79
Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKG 322
L + ++ +A G S+ LA++ G ++S+G+GS+ LG D + PR IQ ++
Sbjct: 80 ALADQ-HIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQT 138
Query: 323 IHVVRVSAGDEHVVALDSSG 342
I ++VS G+ H +AL + G
Sbjct: 139 I--LQVSCGNWHCLALAADG 156
>TAIR|locus:2025277 [details] [associations]
symbol:PRAF1 "AT1G76950" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=ISS]
[GO:0008536 "Ran GTPase binding" evidence=ISS] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR000306 Pfam:PF01363
SMART:SM00064 INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002684
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0046872
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR013591 Pfam:PF08381
PROSITE:PS51514 HSSP:Q15075 EMBL:AF323270 IPI:IPI00521580
RefSeq:NP_565144.1 UniGene:At.19186 ProteinModelPortal:Q947D2
SMR:Q947D2 PRIDE:Q947D2 EnsemblPlants:AT1G76950.1 GeneID:844030
KEGG:ath:AT1G76950 TAIR:At1g76950 InParanoid:Q947D2 OMA:WIPKRIA
PhylomeDB:Q947D2 ProtClustDB:CLSN2686442 Genevestigator:Q947D2
Uniprot:Q947D2
Length = 1103
Score = 252 (93.8 bits), Expect = 2.0e-19, P = 2.0e-19
Identities = 60/177 (33%), Positives = 90/177 (50%)
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ-VTA 223
V Q++ HAAFV + G++FT G+ S GH + +F PRLVE+L V
Sbjct: 283 VHQIACGVRHAAFVTRQGEIFTWGEESGGRLGH-GIGKDVFHPRLVESLTATSSVDFVAC 341
Query: 224 GLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
G T +T+ G ++T G TH G LGHG + PK IA E V ++ GP +
Sbjct: 342 GEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGSLEGLHVASVSCGPWHT 401
Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
+T G +++FG G+ LGHG++ PR +++ G+ + VS G H A+
Sbjct: 402 ALITSYGRLFTFGDGTFGVLGHGDKETVQYPREVESL--SGLRTIAVSCGVWHTAAV 456
Score = 246 (91.7 bits), Expect = 2.0e-18, P = 2.0e-18
Identities = 74/244 (30%), Positives = 115/244 (47%)
Query: 116 ITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
++ G +HT LI++ +F+ G GVLGHG + T V + R + S + VS
Sbjct: 394 VSCGPWHTALITSYGRLFTFGDGTFGVLGHGDKET--VQYPREVESLSGLRTIAVSCGVW 451
Query: 174 HAAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
H A V++ SG++FT GD GH D + P +P V AL ++
Sbjct: 452 HTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKD-PRLKPTCVPALIDYNFHKI 510
Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
G + T LT G V T GS +GQLG+ T D P + V +I+ G ++
Sbjct: 511 ACGHSLTVGLTTSGQVFTMGSTVYGQLGNLQT-DGKLPCLVEDKLASEFVEEISCGAYHV 569
Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
A+T VY++G G+N LGHG+ D P ++ + + HV ++ G + A+
Sbjct: 570 AALTSRNEVYTWGKGANGRLGHGDLEDRKVPTIVEALKDR--HVKYIACGSNYTAAICLH 627
Query: 342 GYVS 345
+VS
Sbjct: 628 KWVS 631
Score = 186 (70.5 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 66/247 (26%), Positives = 110/247 (44%)
Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRI--NFPSAAHVVQVSAS 171
QI G H ++ +F+ G G LGHG + V R+ + + + V V+
Sbjct: 285 QIACGVRHAAFVTRQGEIFTWGEESGGRLGHG--IGKDVFHPRLVESLTATSSVDFVACG 342
Query: 172 ENHAAFVLQSGQVFTCGDNSSFC--CGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
E H V +G+++T GD + GH R+ +L+G+ V+ G T
Sbjct: 343 EFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGSLEGLHVASVSCGPWHTA 402
Query: 230 FLTIRGHVHTCGSNTHGQLGHGD--TLDRPTP-KSIAPLEEVG---------SVVQIAAG 277
+T G + T G T G LGHGD T+ P +S++ L + +VV+I
Sbjct: 403 LITSYGRLFTFGDGTFGVLGHGDKETVQYPREVESLSGLRTIAVSCGVWHTAAVVEIIVT 462
Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
S +V+ +G ++++G G LGHG++ L+P + H +++ G V
Sbjct: 463 QSNSSSVS-SGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDYNFH--KIACGHSLTVG 519
Query: 338 LDSSGYV 344
L +SG V
Sbjct: 520 LTTSGQV 526
Score = 180 (68.4 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 65/244 (26%), Positives = 105/244 (43%)
Query: 116 ITTGRYHTLLISNSS-VFSCGSSL--CGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
+ G +HT ++ + +++ G G+LGHG + + + HV VS
Sbjct: 339 VACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGSLEGLHVASVSCGP 398
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
H A + G++FT GD + GH D + PR VE+L G+ V+ G+ T +
Sbjct: 399 WHTALITSYGRLFTFGDGTFGVLGHGD-KETVQYPREVESLSGLRTIAVSCGVWHTAAVV 457
Query: 233 ------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
G + T G +LGHGD R P + L + + +IA G S
Sbjct: 458 EIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDY-NFHKIACGHSL 516
Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
+ +T +G V++ GS LG+ + +L P ++ + V +S G HV AL S
Sbjct: 517 TVGLTTSGQVFTMGSTVYGQLGNLQTDGKL-PCLVED-KLASEFVEEISCGAYHVAALTS 574
Query: 341 SGYV 344
V
Sbjct: 575 RNEV 578
Score = 167 (63.8 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 44/145 (30%), Positives = 69/145 (47%)
Query: 200 TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP 259
T + P+ +E+ + Q+ G+ F+T +G + T G + G+LGHG D P
Sbjct: 265 TRTDVLVPKPLESNIVLDVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDVFHP 324
Query: 260 KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQT 317
+ + L SV +A G + AVT G +Y++G G++ LGHG P+ I
Sbjct: 325 RLVESLTATSSVDFVACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAG 384
Query: 318 FRRKGIHVVRVSAGDEHVVALDSSG 342
+G+HV VS G H + S G
Sbjct: 385 -SLEGLHVASVSCGPWHTALITSYG 408
Score = 149 (57.5 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 54/194 (27%), Positives = 91/194 (46%)
Query: 97 LQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQ----CV 152
L+++ S + T+A ++I + ++ +S+ +F+ G LGHG + + CV
Sbjct: 441 LRTIAVSCGVWHTAAV-VEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCV 499
Query: 153 -SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE 211
+ NF H +++ + + SGQVFT G G+ T+ + P LVE
Sbjct: 500 PALIDYNF----H--KIACGHSLTVGLTTSGQVFTMGSTVYGQLGNLQTDGKL--PCLVE 551
Query: 212 -ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 270
L ++++ G LT R V+T G +G+LGHGD DR P + L++
Sbjct: 552 DKLASEFVEEISCGAYHVAALTSRNEVYTWGKGANGRLGHGDLEDRKVPTIVEALKD-RH 610
Query: 271 VVQIAAGPSYMLAV 284
V IA G +Y A+
Sbjct: 611 VKYIACGSNYTAAI 624
>FB|FBgn0031107 [details] [associations]
symbol:HERC2 "HECT and RLD domain containing protein 2
ortholog (H. sapiens)" species:7227 "Drosophila melanogaster"
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=NAS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA;NAS] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0020037 "heme binding" evidence=IEA] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IBA] [GO:0005737 "cytoplasm" evidence=IBA]
[GO:0005634 "nucleus" evidence=IBA] Pfam:PF00632 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR009060 InterPro:IPR010606
Pfam:PF00173 Pfam:PF06701 PROSITE:PS50237 PROSITE:PS51416
SMART:SM00119 UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005737 GO:GO:0005814 GO:GO:0046872
EMBL:AE014298 GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 InterPro:IPR015940 PROSITE:PS50030
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939
PROSITE:PS51284 InterPro:IPR000859 SUPFAM:SSF49854 GO:GO:0042787
SUPFAM:SSF46934 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00700000104208 EMBL:AY113293 EMBL:AF189221
RefSeq:NP_608388.2 UniGene:Dm.3302 ProteinModelPortal:Q9VR91
SMR:Q9VR91 IntAct:Q9VR91 STRING:Q9VR91 PaxDb:Q9VR91
EnsemblMetazoa:FBtr0301344 GeneID:33035 KEGG:dme:Dmel_CG11734
UCSC:CG11734-RB CTD:8924 FlyBase:FBgn0031107 InParanoid:Q9VR91
KO:K10595 OMA:QLAFTRD OrthoDB:EOG48GTJ3 PhylomeDB:Q9VR91
GenomeRNAi:33035 NextBio:781623 Bgee:Q9VR91 GermOnline:CG11734
Uniprot:Q9VR91
Length = 4912
Score = 254 (94.5 bits), Expect = 4.3e-19, Sum P(2) = 4.3e-19
Identities = 79/234 (33%), Positives = 114/234 (48%)
Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
+ +G H L ++ + VFS G G LGHG TT + R + A + V+ +
Sbjct: 3078 VHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTT--LDKPRLVEALRAKKIRDVACGSS 3135
Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFL 231
H+A + G+++T G GH D N +P+LV AL G QV G T L
Sbjct: 3136 HSAAISSQGELYTWGLGEYGRLGHGD-NTTQLKPKLVTALAGRRVVQVACGSRDAQTLAL 3194
Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
T G V + G G+LG G + TP I L +G VVQI G + LA+T G V+
Sbjct: 3195 TEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIG-VVQIECGAQFSLALTRAGEVW 3253
Query: 292 SFGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
++G G + LGHG +QH +P+ I R G V+ V+ G H +A+ +G V
Sbjct: 3254 TWGKGDYYRLGHGGDQHVR-KPQPIGGLR--GRRVIHVAVGALHCLAVTDAGQV 3304
Score = 235 (87.8 bits), Expect = 3.5e-15, Sum P(2) = 3.5e-15
Identities = 73/238 (30%), Positives = 114/238 (47%)
Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA-HVVQ---V 168
+ I G ++S + V++CG G LG G T V P +VV+ V
Sbjct: 3022 IHIAGGSKSLFIVSQDGKVYACGEGTNGRLGLG--VTHNVPLPH-QLPVLRQYVVKKVAV 3078
Query: 169 SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
+ HA + G+VF+ G+ GH + + +PRLVEAL+ + V G + +
Sbjct: 3079 HSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTT-LDKPRLVEALRAKKIRDVACGSSHS 3137
Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP--SYMLAVTG 286
++ +G ++T G +G+LGHGD + PK + L VVQ+A G + LA+T
Sbjct: 3138 AAISSQGELYTWGLGEYGRLGHGDNTTQLKPKLVTALAG-RRVVQVACGSRDAQTLALTE 3196
Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
+G V+S+G G LG G P I+ R GI VV++ G + +AL +G V
Sbjct: 3197 DGAVFSWGDGDFGKLGRGGSEGSDTPHEIE--RLSGIGVVQIECGAQFSLALTRAGEV 3252
Score = 229 (85.7 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
Identities = 69/235 (29%), Positives = 107/235 (45%)
Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSAS 171
+ +G H L L + V++ G G LGHG +S+ R + + V ++
Sbjct: 4141 VNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNR----MSYDRPKLVEHLNGMSVADIACG 4196
Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
H+A + SG V T G GH D+ + RP+LVEAL G + G L
Sbjct: 4197 SAHSAAITASGHVLTWGKGRYGRLGHGDSEDQL-RPKLVEALLGYRAIDIACGSGDAQTL 4255
Query: 232 TIRG--HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
I +V + G +G+LG G + P I L +G VV++ G + +A+T +G
Sbjct: 4256 CITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLG-VVKVECGSQFSVALTKSGA 4314
Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
VY++G G LGHG +P+ + + K I + ++ G H VA SG V
Sbjct: 4315 VYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKI--ISIATGSLHCVACSDSGEV 4367
Score = 221 (82.9 bits), Expect = 2.7e-13, Sum P(2) = 2.7e-13
Identities = 69/238 (28%), Positives = 110/238 (46%)
Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV----VQV 168
+Q+ G ++ + +F+ G G LG G + + T + S HV V V
Sbjct: 4085 VQLAGGEQSLFAVTPDGKLFATGYGSGGRLGVGGSDSWAIP-TLLG--SLQHVFVKKVAV 4141
Query: 169 SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNF 227
++ H + G+V+ G+ GH NR + RP+LVE L G+ + G
Sbjct: 4142 NSGGKHCLALTTEGEVYAWGEGEDGKLGHG--NRMSYDRPKLVEHLNGMSVADIACGSAH 4199
Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLAVTG 286
+ +T GHV T G +G+LGHGD+ D+ PK + L ++ + +G + L +T
Sbjct: 4200 SAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITD 4259
Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
+ V+S+G G LG G P I++ G+ VV+V G + VAL SG V
Sbjct: 4260 DDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLA--GLGVVKVECGSQFSVALTKSGAV 4315
Score = 198 (74.8 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 65/225 (28%), Positives = 97/225 (43%)
Query: 116 ITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
+ G H+ IS+ +++ G G LGHG TTQ + + + VVQV+
Sbjct: 3130 VACGSSHSAAISSQGELYTWGLGEYGRLGHGDNTTQ-LKPKLVTALAGRRVVQVACGSRD 3188
Query: 175 AAFVL--QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
A + + G VF+ GD G R + P +E L G+ Q+ G F+ LT
Sbjct: 3189 AQTLALTEDGAVFSWGDGDFGKLG-RGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALT 3247
Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
G V T G + +LGHG P+ I L V+ +A G + LAVT G VY+
Sbjct: 3248 RAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRG-RRVIHVAVGALHCLAVTDAGQVYA 3306
Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
+G + G G +P + + V RV+ G H +A
Sbjct: 3307 WGDNDHGQQGSGNTFVNKKPALV--IGLDAVFVNRVACGSSHSIA 3349
Score = 194 (73.4 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 56/186 (30%), Positives = 95/186 (51%)
Query: 163 AHVVQVSASEN----HAAFVLQSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVP 217
AH V +S + + H + + ++ G GH DT+ R + P + AL+
Sbjct: 612 AHDVFISIAGHCEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAV--PTKIAALEQHC 669
Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAA 276
+ V G +++ +T G++ T G T+ +LGHG++ DR P + L + V V + +
Sbjct: 670 VQSVYCGCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGS 729
Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
G ++ LA+T G+V+++G G LG+G + LQP +++ R V RV AG + V
Sbjct: 730 GDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESLPR----VQRVFAGSQFSV 785
Query: 337 ALDSSG 342
AL S G
Sbjct: 786 ALSSEG 791
Score = 190 (71.9 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 62/228 (27%), Positives = 97/228 (42%)
Query: 116 ITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQC-VSFTRINFPSAAHVVQVSASEN 173
I G H+ I+ S V + G G LGHG Q A + + +
Sbjct: 4193 IACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDA 4252
Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
+ V++ GD G R + P +E+L G+ +V G F+ LT
Sbjct: 4253 QTLCITDDDNVWSWGDGDYGKLG-RGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTK 4311
Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
G V+T G +LGHG PK +A L+ ++ IA G + +A + +G VY++
Sbjct: 4312 SGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGK-KIISIATGSLHCVACSDSGEVYTW 4370
Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
G LG G +PR + + K H+V+V+ G H +AL +S
Sbjct: 4371 GDNDEGQLGDGTVTAIQRPRLVAALQGK--HIVKVTCGSAHTLALSTS 4416
Score = 152 (58.6 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 41/117 (35%), Positives = 57/117 (48%)
Query: 230 FLTI-RGH-VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
FL I H ++ G+ +LGHGDT R P IA LE+ V + G SY A+T
Sbjct: 628 FLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQ-HCVQSVYCGCSYSAAITCG 686
Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
G + ++G G+ LGHG D P + + V + +GD H +AL S G V
Sbjct: 687 GNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLV 743
Score = 141 (54.7 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 47/178 (26%), Positives = 77/178 (43%)
Query: 106 IVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV 165
+V+ + G+ T L + +VFS G G LG G I S V
Sbjct: 3179 VVQVACGSRDAQT----LALTEDGAVFSWGDGDFGKLGRGGSEGSDTPH-EIERLSGIGV 3233
Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
VQ+ + + ++G+V+T G + GH ++ + +P+ + L+G V G
Sbjct: 3234 VQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGG-DQHVRKPQPIGGLRGRRVIHVAVGA 3292
Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
+T G V+ G N HGQ G G+T P + L+ V V ++A G S+ +A
Sbjct: 3293 LHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAV-FVNRVACGSSHSIA 3349
Score = 38 (18.4 bits), Expect = 4.3e-19, Sum P(2) = 4.3e-19
Identities = 14/50 (28%), Positives = 20/50 (40%)
Query: 37 LTSKTFGGSHGLYPQKFRSLVDLAASQLC----ALHSIYAGMSRNVQIEL 82
L + G L P + +VD A C A ++Y M R Q+ L
Sbjct: 1686 LNERQIHGEGELDPALMQDIVDFALQDSCDVETARRAMYCQMQR-YQLRL 1734
Score = 37 (18.1 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 13/57 (22%), Positives = 20/57 (35%)
Query: 164 HVVQVS--ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
H++Q S A + GQ+ GD+ CG + +P L C
Sbjct: 104 HLIQDCELVSSPTAPLLNARGQLSYLGDDGKHYCGAQQLKCSCCQPEYCGPLSACNC 160
>ZFIN|ZDB-GENE-070718-6 [details] [associations]
symbol:herc2 "hect domain and RLD 2" species:7955
"Danio rerio" [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0006464 "cellular protein modification
process" evidence=IEA] [GO:0020037 "heme binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00632
InterPro:IPR000433 InterPro:IPR000569 InterPro:IPR001199
InterPro:IPR009060 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-070718-6
GO:GO:0046872 GO:GO:0008270 GO:GO:0020037 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
SUPFAM:SSF46934 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 InterPro:IPR006624 SMART:SM00706
EMBL:CABZ01006344 EMBL:CABZ01006345 EMBL:CABZ01006346 EMBL:FP085470
IPI:IPI00495163 Ensembl:ENSDART00000110770 Uniprot:E7EYK8
Length = 4832
Score = 253 (94.1 bits), Expect = 4.3e-19, Sum P(2) = 4.3e-19
Identities = 70/232 (30%), Positives = 110/232 (47%)
Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINF----PSAAHVVQVSASENH 174
G+++ L N VFS G G LGHG +TT T I+ P VV ++ +
Sbjct: 494 GQHYLALSVNGEVFSWGCGDGGRLGHG-DTTYLEEPTMISVFSGRPVGKQVVHIACGSTY 552
Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI- 233
+A + G++ T G + GH + P LV ALKG+ V G L +
Sbjct: 553 SAAITADGELHTWGRGNYGRLGHGSSEDQT-TPMLVTALKGLKVIDVACGSGDAQTLAVT 611
Query: 234 -RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
G V + G +G+LG G + TPK + L+++ +V++ G + +A+T +G VY+
Sbjct: 612 ENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDL-DIVKVCCGSQFSVALTKDGQVYT 670
Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
+G G N LGHG P+ + + + K VV ++ G H +AL G V
Sbjct: 671 WGKGDNQRLGHGTDEHVRYPKLLDSLQGK--RVVDIAVGSTHCLALTEEGEV 720
Score = 244 (91.0 bits), Expect = 4.1e-17, Sum P(2) = 4.1e-17
Identities = 71/232 (30%), Positives = 110/232 (47%)
Query: 116 ITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
+ +G H L +S+ ++S G + G LGHG + C I VV ++A H
Sbjct: 4042 VNSGGKHCLALSSEGELYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGVEVVDIAAGGAH 4100
Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLT 232
+A + SG+++T G GH D+ + +P+LVEAL+G V G T LT
Sbjct: 4101 SACITASGELYTWGKGRYGRLGHGDSEDQL-KPKLVEALQGHRVIDVACGSGDAQTLCLT 4159
Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
V + G +G+LG G + P I L +G VV++ G + +A+T +G VY+
Sbjct: 4160 DDDMVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSGAVYT 4218
Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
+G G LGHG +PR +Q + K V+ ++ G H V G V
Sbjct: 4219 WGKGDYHRLGHGSDDHVRRPRQVQGLQGK--KVIAIATGSLHCVCCTEDGEV 4268
Score = 239 (89.2 bits), Expect = 2.7e-16, Sum P(2) = 2.7e-16
Identities = 73/228 (32%), Positives = 106/228 (46%)
Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
GR+ L + VFS G G LGH C I + ++ +H+A +
Sbjct: 3052 GRHAMALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAI 3110
Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
SG++++ G GH D N RP+LV+ L G QV G T LT G
Sbjct: 3111 TSSGELYSWGLGEYGRLGHGD-NTTQLRPKLVKVLLGHRVVQVACGSRDAQTLALTDEGM 3169
Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
V + G G+LG G + P++I L G V QI G + LA+T +GVV+++G G
Sbjct: 3170 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3228
Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
F LGHG +P+ ++ R K I V V+ G H +A+ +G V
Sbjct: 3229 DYFRLGHGTDVHVRKPQMVEGLRGKKI--VHVAVGALHCLAVTETGQV 3274
Score = 231 (86.4 bits), Expect = 3.7e-15, Sum P(2) = 3.7e-15
Identities = 68/224 (30%), Positives = 112/224 (50%)
Query: 127 SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV----VQVSASENHAAFVLQSG 182
++ +++ G G LG G T+ VS T S HV V V++ H + G
Sbjct: 4000 ADGKLYATGYGAGGRLGIGG--TESVS-TPTLLESIQHVFIRKVAVNSGGKHCLALSSEG 4056
Query: 183 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
++++ G+ GH + + P RPR++E+L+GV + AG + +T G ++T G
Sbjct: 4057 ELYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGVEVVDIAAGGAHSACITASGELYTWGK 4115
Query: 243 NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLAVTGNGVVYSFGSGSNFC 300
+G+LGHGD+ D+ PK + L+ V+ +A +G + L +T + +V+S+G G
Sbjct: 4116 GRYGRLGHGDSEDQLKPKLVEALQG-HRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGK 4174
Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
LG G P I + G+ VV+V G + VAL SG V
Sbjct: 4175 LGRGGSDGCKVPMKIDSLT--GLGVVKVECGSQFSVALTKSGAV 4216
Score = 217 (81.4 bits), Expect = 2.5e-13, Sum P(2) = 2.5e-13
Identities = 74/245 (30%), Positives = 118/245 (48%)
Query: 108 ET-SAGNM-QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH 164
ET SA N+ Q+ G ++ V++CG + G LG G + +I+ S
Sbjct: 2983 ETLSALNVVQVAGGSKSLFAVTAEGKVYACGEATNGRLGLGLSSGTIPIPRQISALSNYV 3042
Query: 165 V--VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
V V V + HA + G+VF+ G+ GH + +PRL+EALK + +
Sbjct: 3043 VKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIA 3101
Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGP--S 279
G + + +T G +++ G +G+LGHGD + PK + L +G VVQ+A G +
Sbjct: 3102 CGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQLRPKLVKVL--LGHRVVQVACGSRDA 3159
Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
LA+T G+V+S+G G LG G P+ I+ +G V ++ G + +AL
Sbjct: 3160 QTLALTDEGMVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG--VCQIECGAQFSLALT 3217
Query: 340 SSGYV 344
SG V
Sbjct: 3218 KSGVV 3222
Score = 200 (75.5 bits), Expect = 2.9e-11, Sum P(2) = 2.9e-11
Identities = 67/225 (29%), Positives = 100/225 (44%)
Query: 116 ITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
I G H+ I++S ++S G G LGHG TTQ + + VVQV+
Sbjct: 3100 IACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQ-LRPKLVKVLLGHRVVQVACGSRD 3158
Query: 175 AAFVL--QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
A + G VF+ GD G R + P+ +E L G Q+ G F+ LT
Sbjct: 3159 AQTLALTDEGMVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3217
Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
G V T G + +LGHG + P+ + L +V +A G + LAVT G V++
Sbjct: 3218 KSGVVWTWGKGDYFRLGHGTDVHVRKPQMVEGLRGK-KIVHVAVGALHCLAVTETGQVFA 3276
Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
+G + G+G +P +Q +G + RV+ G H VA
Sbjct: 3277 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3319
Score = 185 (70.2 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 50/146 (34%), Positives = 77/146 (52%)
Query: 207 PRLVEALKGVPCKQVTA---GLNFTGFLTIRGHVHTCGSNTHGQLGHGDT--LDRPTPKS 261
P LV AL ++ A G ++ L++ G V + G G+LGHGDT L+ PT S
Sbjct: 474 PMLVHALTSRKIMKLAAHPDGQHYLA-LSVNGEVFSWGCGDGGRLGHGDTTYLEEPTMIS 532
Query: 262 IAPLEEVGS-VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR 320
+ VG VV IA G +Y A+T +G ++++G G+ LGHG D+ P +
Sbjct: 533 VFSGRPVGKQVVHIACGSTYSAAITADGELHTWGRGNYGRLGHGSSEDQTTPMLVTAL-- 590
Query: 321 KGIHVVRVS--AGDEHVVALDSSGYV 344
KG+ V+ V+ +GD +A+ +G V
Sbjct: 591 KGLKVIDVACGSGDAQTLAVTENGQV 616
Score = 185 (70.2 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 63/215 (29%), Positives = 98/215 (45%)
Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF--V 178
Y + ++ + + G G LGHG Q + V+ V+ A V
Sbjct: 552 YSAAITADGELHTWGRGNYGRLGHGSSEDQTTPML-VTALKGLKVIDVACGSGDAQTLAV 610
Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
++GQV++ GD G R + P+LVE L+ + +V G F+ LT G V+
Sbjct: 611 TENGQVWSWGDGDYGKLG-RGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVY 669
Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
T G + +LGHG PK + L+ VV IA G ++ LA+T G V+S+GS
Sbjct: 670 TWGKGDNQRLGHGTDEHVRYPKLLDSLQGK-RVVDIAVGSTHCLALTEEGEVHSWGSNDK 728
Query: 299 FCLGHGEQ--HDELQPRAIQTFRRKGIHVVRVSAG 331
L H + ++ QP+A+ K H+V +S G
Sbjct: 729 --LQHFDTLFSNKKQPKALPGLNSK--HIVGISCG 759
Score = 179 (68.1 bits), Expect = 8.2e-09, Sum P(2) = 8.2e-09
Identities = 66/260 (25%), Positives = 113/260 (43%)
Query: 84 NRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLG 143
NR + RV+ L+ VE +V+ +AG G + + ++ +++ G G LG
Sbjct: 4073 NRSPCDRPRVIESLRGVE----VVDIAAG------GAHSACITASGELYTWGKGRYGRLG 4122
Query: 144 HGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL--QSGQVFTCGDNSSFCCGHRDTN 201
HG Q + + V+ V+ A + V++ GD G R +
Sbjct: 4123 HGDSEDQ-LKPKLVEALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLG-RGGS 4180
Query: 202 RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 261
P +++L G+ +V G F+ LT G V+T G + +LGHG P+
Sbjct: 4181 DGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQ 4240
Query: 262 IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 321
+ L+ V+ IA G + + T +G VY++G LG G + +PR + + K
Sbjct: 4241 VQGLQGK-KVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGK 4299
Query: 322 GIHVVRVSAGDEHVVALDSS 341
I+ RV+ G H +A +S
Sbjct: 4300 KIN--RVACGSAHTLAWSTS 4317
Score = 164 (62.8 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 50/162 (30%), Positives = 78/162 (48%)
Query: 183 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
+VF G N G ++ I P E L + QV G +T G V+ CG
Sbjct: 2956 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTAEGKVYACGE 3014
Query: 243 NTHGQLGHGDTLDR-PTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
T+G+LG G + P P+ I+ L V V + +G + +A+T +G V+S+G G +
Sbjct: 3015 ATNGRLGLGLSSGTIPIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGK 3074
Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
LGH + + +PR I+ + K I ++ G H A+ SSG
Sbjct: 3075 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAAITSSG 3114
Score = 152 (58.6 bits), Expect = 8.7e-06, Sum P(2) = 8.7e-06
Identities = 46/163 (28%), Positives = 77/163 (47%)
Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
SG ++ G N G + + + P EAL + Q+ G +T G ++
Sbjct: 3949 SGTIYGWGHNHRGQLGGIEGAK-VKVPTPTEALATLRPVQLIGGEQTLFAVTADGKLYAT 4007
Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
G G+LG G T TP + ++ V V + +G + LA++ G +YS+G +
Sbjct: 4008 GYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGELYSWGEAEDG 4067
Query: 300 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
LGHG + +PR I++ R G+ VV ++AG H + +SG
Sbjct: 4068 KLGHGNRSPCDRPRVIESLR--GVEVVDIAAGGAHSACITASG 4108
Score = 152 (58.6 bits), Expect = 3.3e-05, Sum P(3) = 3.3e-05
Identities = 51/180 (28%), Positives = 76/180 (42%)
Query: 106 IVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV 165
+V+ + G+ T L VFS G G LG G + C I + V
Sbjct: 3149 VVQVACGSRDAQT----LALTDEGMVFSWGDGDFGKLGRGG-SEGCNIPQNIERLNGQGV 3203
Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
Q+ + + +SG V+T G F GH T+ + +P++VE L+G V G
Sbjct: 3204 CQIECGAQFSLALTKSGVVWTWGKGDYFRLGH-GTDVHVRKPQMVEGLRGKKIVHVAVGA 3262
Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
+T G V G N HGQ G+G T P + LE + ++A G S+ +A T
Sbjct: 3263 LHCLAVTETGQVFAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQ-KITRVACGSSHSVAWT 3321
Score = 43 (20.2 bits), Expect = 4.3e-19, Sum P(2) = 4.3e-19
Identities = 19/78 (24%), Positives = 31/78 (39%)
Query: 7 LFSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCA 66
L ++ LP +F+ G +S V L +E +K HG K S + L L
Sbjct: 224 LDALRALPEATLFD---EGTVSPVWLEVVERATKFLSDIHGSASGKAPSNIPLQDQHLAL 280
Query: 67 LHSIYAGMSRNVQIELLN 84
+ + R +LL+
Sbjct: 281 AILLELAVQRGTLSQLLS 298
Score = 40 (19.1 bits), Expect = 3.3e-05, Sum P(3) = 3.3e-05
Identities = 13/63 (20%), Positives = 27/63 (42%)
Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
+ L+ G+G +Y +G LG E P + + V++ G++ + A+
Sbjct: 3942 WTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPTEALAT--LRPVQLIGGEQTLFAVT 3999
Query: 340 SSG 342
+ G
Sbjct: 4000 ADG 4002
>RGD|1561739 [details] [associations]
symbol:Herc6 "HECT and RLD domain containing E3 ubiquitin
protein ligase family member 6" species:10116 "Rattus norvegicus"
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 RGD:1561739 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204 eggNOG:COG5021
HOGENOM:HOG000208452 HOVERGEN:HBG050878 OrthoDB:EOG4N30N6
IPI:IPI00553869 EMBL:BC085921 UniGene:Rn.107120
ProteinModelPortal:Q5U2P8 PhosphoSite:Q5U2P8 UCSC:RGD:1561739
InParanoid:Q5U2P8 ArrayExpress:Q5U2P8 Genevestigator:Q5U2P8
Uniprot:Q5U2P8
Length = 1034
Score = 250 (93.1 bits), Expect = 4.5e-19, P = 4.5e-19
Identities = 73/237 (30%), Positives = 117/237 (49%)
Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGH-GPETTQCVSFTRINFPSAAHVVQVSAS 171
++ +G H+LL+ SN V+SCG + G LG P++T+ I S H+ VS
Sbjct: 31 LKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPE--PIQALSTVHIDLVSCG 88
Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
+ H+ V G+VFT G S G ++ F P + +L G+ QV+ G + L
Sbjct: 89 KEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLAL 148
Query: 232 TIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
+ G V + GSN GQLG G+ L + +P+ + LE + + Q+AAG ++ A++ G
Sbjct: 149 SEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGI-PLAQVAAGGTHSFALSLMGTS 207
Query: 291 YSFG---SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
+ +G SG G+ + +P +I K ++VV +S G EH L G V
Sbjct: 208 FGWGNNRSGQLALSGNSAKEQIYKPHSIGAL--KTLNVVYISCGYEHTSVLTEDGQV 262
Score = 220 (82.5 bits), Expect = 3.9e-15, P = 3.9e-15
Identities = 71/247 (28%), Positives = 122/247 (49%)
Query: 98 QSVEHSSDIVETSAGNMQITT-GRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSF- 154
QS + I S ++ + + G+ H++ + + VF+ G+ G LG G E+ + +SF
Sbjct: 66 QSTKRPEPIQALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIG-ESKE-ISFM 123
Query: 155 -TRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
T+IN + ++QVS H+ + + GQVF+ G N G + P+ V++L
Sbjct: 124 PTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSL 183
Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGDTLDRPT--PKSIAPLEEVGS 270
+G+P QV AG + L++ G G+N GQL G++ P SI L+ + +
Sbjct: 184 EGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTL-N 242
Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
VV I+ G + +T +G V++FG S+ L H + P+ I+ G HV ++
Sbjct: 243 VVYISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRSGRGGPQLIEGI---GGHVSQIEC 299
Query: 331 GDEHVVA 337
G H +A
Sbjct: 300 GSYHTIA 306
Score = 190 (71.9 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 51/189 (26%), Positives = 97/189 (51%)
Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
R+ + +++ ++ E H+ + + +V++CGDNS G + + RP ++AL
Sbjct: 21 RLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSP-QSTKRPEPIQALST 79
Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQI 274
V V+ G + + +G V T G+ + GQLG G++ + P I L + ++Q+
Sbjct: 80 VHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGI-KIIQV 138
Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDE 333
+ G + LA++ +G V+S+GS LG G + P+ +++ +GI + +V+AG
Sbjct: 139 SCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSL--EGIPLAQVAAGGT 196
Query: 334 HVVALDSSG 342
H AL G
Sbjct: 197 HSFALSLMG 205
Score = 178 (67.7 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 59/200 (29%), Positives = 87/200 (43%)
Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
+Q++ G YH+L +S + VFS GS+ G LG G S ++ + QV+A
Sbjct: 136 IQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGG 195
Query: 173 NHAAFVLQSGQVFTCGDNSS--FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
H+ + G F G+N S I++P + ALK + ++ G T
Sbjct: 196 THSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSV 255
Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA-VTGNGV 289
LT G V T G ++ QL H R P+ I + G V QI G + +A V G
Sbjct: 256 LTEDGQVFTFGGSSSEQLQHSPRSGRGGPQLIEGIG--GHVSQIECGSYHTIAYVYTTGQ 313
Query: 290 VYSFGSGSNFCLGHGEQHDE 309
V S G G + C + H E
Sbjct: 314 VVSLGRGPS-CTSNAT-HQE 331
Score = 162 (62.1 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 43/140 (30%), Positives = 68/140 (48%)
Query: 206 RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 265
+PR +EA G+ + +G + L V++CG N+ GQLG P+ I L
Sbjct: 18 QPRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEPIQAL 77
Query: 266 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD-ELQPRAIQTFRRKGIH 324
V + ++ G + +AV G V+++G+GS LG GE + P I + GI
Sbjct: 78 STV-HIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLA--GIK 134
Query: 325 VVRVSAGDEHVVALDSSGYV 344
+++VS G H +AL G V
Sbjct: 135 IIQVSCGHYHSLALSEDGQV 154
>UNIPROTKB|F1LPM8 [details] [associations]
symbol:Herc6 "Protein Herc6" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
RGD:1561739 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
EMBL:AC126722 IPI:IPI00553869 Ensembl:ENSRNOT00000058626
ArrayExpress:F1LPM8 Uniprot:F1LPM8
Length = 1036
Score = 250 (93.1 bits), Expect = 4.5e-19, P = 4.5e-19
Identities = 73/238 (30%), Positives = 120/238 (50%)
Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGH-GPETTQCVSFTRINFPSAAHVVQVSAS 171
++ +G H+LL+ SN V+SCG + G LG P++T+ I S H+ VS
Sbjct: 31 LKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPE-EPIQALSTVHIDLVSCG 89
Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
+ H+ V G+VFT G S G ++ F P + +L G+ QV+ G + L
Sbjct: 90 KEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLAL 149
Query: 232 TIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
+ G V + GSN GQLG G+ L + +P+ + LE + + Q+AAG ++ A++ G
Sbjct: 150 SEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGI-PLAQVAAGGTHSFALSLMGTS 208
Query: 291 YSFG---SGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
+ +G SG G+ + +++ +P +I K ++VV +S G EH L G V
Sbjct: 209 FGWGNNRSGQLALSGNSAKAEQIYKPHSIGAL--KTLNVVYISCGYEHTSVLTEDGQV 264
Score = 215 (80.7 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 67/229 (29%), Positives = 115/229 (50%)
Query: 116 ITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSF--TRINFPSAAHVVQVSASE 172
++ G+ H++ + + VF+ G+ G LG G E+ + +SF T+IN + ++QVS
Sbjct: 86 VSCGKEHSVAVCHQGRVFTWGAGSEGQLGIG-ESKE-ISFMPTKINSLAGIKIIQVSCGH 143
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
H+ + + GQVF+ G N G + P+ V++L+G+P QV AG + L+
Sbjct: 144 YHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGTHSFALS 203
Query: 233 IRGHVHTCGSNTHGQLG-HGDTLDRPT---PKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
+ G G+N GQL G++ P SI L+ + +VV I+ G + +T +G
Sbjct: 204 LMGTSFGWGNNRSGQLALSGNSAKAEQIYKPHSIGALKTL-NVVYISCGYEHTSVLTEDG 262
Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
V++FG S+ L H + P+ I+ G HV ++ G H +A
Sbjct: 263 QVFTFGGSSSEQLQHSPRSGRGGPQLIEGI---GGHVSQIECGSYHTIA 308
Score = 183 (69.5 bits), Expect = 7.0e-11, P = 7.0e-11
Identities = 53/192 (27%), Positives = 98/192 (51%)
Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRD---TNRPIFRPRLVEA 212
R+ + +++ ++ E H+ + + +V++CGDNS G + T RP P ++A
Sbjct: 21 RLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPE-EP--IQA 77
Query: 213 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSV 271
L V V+ G + + +G V T G+ + GQLG G++ + P I L + +
Sbjct: 78 LSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGI-KI 136
Query: 272 VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSA 330
+Q++ G + LA++ +G V+S+GS LG G + P+ +++ +GI + +V+A
Sbjct: 137 IQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSL--EGIPLAQVAA 194
Query: 331 GDEHVVALDSSG 342
G H AL G
Sbjct: 195 GGTHSFALSLMG 206
Score = 176 (67.0 bits), Expect = 4.3e-10, P = 4.3e-10
Identities = 60/201 (29%), Positives = 89/201 (44%)
Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
+Q++ G YH+L +S + VFS GS+ G LG G S ++ + QV+A
Sbjct: 137 IQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGG 196
Query: 173 NHAAFVLQSGQVFTCGDNSS---FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
H+ + G F G+N S G+ I++P + ALK + ++ G T
Sbjct: 197 THSFALSLMGTSFGWGNNRSGQLALSGNSAKAEQIYKPHSIGALKTLNVVYISCGYEHTS 256
Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA-VTGNG 288
LT G V T G ++ QL H R P+ I + G V QI G + +A V G
Sbjct: 257 VLTEDGQVFTFGGSSSEQLQHSPRSGRGGPQLIEGIG--GHVSQIECGSYHTIAYVYTTG 314
Query: 289 VVYSFGSGSNFCLGHGEQHDE 309
V S G G + C + H E
Sbjct: 315 QVVSLGRGPS-CTSNAT-HQE 333
Score = 156 (60.0 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 42/142 (29%), Positives = 71/142 (50%)
Query: 206 RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 265
+PR +EA G+ + +G + L V++CG N+ GQLG P+ P+
Sbjct: 18 QPRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEE--PI 75
Query: 266 EEVGSV-VQ-IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD-ELQPRAIQTFRRKG 322
+ + +V + ++ G + +AV G V+++G+GS LG GE + P I + G
Sbjct: 76 QALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLA--G 133
Query: 323 IHVVRVSAGDEHVVALDSSGYV 344
I +++VS G H +AL G V
Sbjct: 134 IKIIQVSCGHYHSLALSEDGQV 155
>UNIPROTKB|E2RFW5 [details] [associations]
symbol:HERC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:26091 KO:K10615 EMBL:AAEX03002773
GeneID:479225 KEGG:cfa:479225 RefSeq:XP_536367.2
Ensembl:ENSCAFT00000021404 Uniprot:E2RFW5
Length = 1049
Score = 250 (93.1 bits), Expect = 4.6e-19, P = 4.6e-19
Identities = 76/252 (30%), Positives = 120/252 (47%)
Query: 98 QSVEHSSDIVETSAGNM-QITTGRYHTLLISNSS-VFSCGSSLCGVLGH-GPETTQCVSF 154
+S + +V A N+ ++ G HTL +++ V++ G G LG G E +C+
Sbjct: 70 KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127
Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
R I S +VQV+ H+ + ++ +VF G N G + P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSL 187
Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
G+P QV AG + LT+ G + G N GQLG D DR P + L +V
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR-TQKIVY 246
Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
I G + A+T G V++FG+G LGH E+ PR + F G V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304
Query: 334 HVVA-LDSSGYV 344
H A + SSG +
Sbjct: 305 HTSAFVPSSGRI 316
Score = 229 (85.7 bits), Expect = 3.3e-16, P = 3.3e-16
Identities = 78/251 (31%), Positives = 121/251 (48%)
Query: 70 IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
+YA G+ + Q+ LL G+ + +R ++++ SDI +Q+ G YH+L +S
Sbjct: 105 VYAWGLDSDGQLGLL----GS-EECIRVPRNIKSLSDIQI-----VQVACGYYHSLALSK 154
Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
+S VF G + G LG G + + S I +QV+A H+ + SG +F
Sbjct: 155 ASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW 214
Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
G N G D N + P L+++L+ + G + T LT G V T G+ +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
LGH T P+ + E +GS+V QIA G + A V +G +YSFG G N LG G
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331
Query: 306 QHDELQPRAIQ 316
+ P ++
Sbjct: 332 TSNRKSPFTVK 342
Score = 212 (79.7 bits), Expect = 3.5e-14, P = 3.5e-14
Identities = 62/228 (27%), Positives = 108/228 (47%)
Query: 119 GRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 177
G HT+ + + +V++CG + G LGH + ++ A ++V VS E H
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLA 98
Query: 178 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
+ GQV+ G +S G + I PR +++L + QV G + L+ V
Sbjct: 99 LNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEV 158
Query: 238 HTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
G N +GQLG G D + +P+ I L + +Q+AAG ++ +T +G ++ +G
Sbjct: 159 FCWGQNKYGQLGLGIDCKKQASPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRN 217
Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
LG +++D P +++ R + I V + G++H AL G V
Sbjct: 218 KFGQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGV 263
Score = 173 (66.0 bits), Expect = 9.5e-10, P = 9.5e-10
Identities = 63/213 (29%), Positives = 96/213 (45%)
Query: 135 GSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
G++ G LG G + V R +F V V H FVL G V+TCG N
Sbjct: 5 GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64
Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
GH + + +P V AL V+ G T L +G V+ G ++ GQLG G
Sbjct: 65 QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121
Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
P++I L ++ +VQ+A G + LA++ V+ +G LG G + +
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQAS 180
Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
P+ I++ GI ++V+AG H L SG +
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAI 211
Score = 159 (61.0 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 57/219 (26%), Positives = 99/219 (45%)
Query: 50 PQKFRSLVDLAASQL-CAL-HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIV 107
P+ +SL D+ Q+ C HS+ +S+ ++ + N + L + S ++
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSL--ALSKASEVFCWGQ-NKYGQLGLGIDCKKQASPQLI 184
Query: 108 ETSAGN--MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH 164
++ G MQ+ G H+ +++ S ++F G + G LG E + V +
Sbjct: 185 KSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVP-NLLKSLRTQK 243
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
+V + E+H A + + G VFT G GH T+ I PR V L G Q+ G
Sbjct: 244 IVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKVFELMGSIVTQIACG 302
Query: 225 LNFTG-FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
T F+ G +++ G +GQLG G T +R +P ++
Sbjct: 303 RQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 157 (60.3 bits), Expect = 5.8e-08, P = 5.8e-08
Identities = 50/161 (31%), Positives = 78/161 (48%)
Query: 187 CGDNSSFC-CGHRDTNRPI-FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
C N+SF G + I PR + + V GL T F+ G V+TCG N
Sbjct: 3 CWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCND 62
Query: 245 HGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH- 303
GQLGH + R P+ + L+ ++V ++ G ++ LA+ G VY++G S+ LG
Sbjct: 63 LGQLGHEKS--RKKPEQVVALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119
Query: 304 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
G + PR I++ I +V+V+ G H +AL + V
Sbjct: 120 GSEECIRVPRNIKSL--SDIQIVQVACGYYHSLALSKASEV 158
>UNIPROTKB|E1C514 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:SPAVDFR EMBL:AADN02016126
EMBL:AADN02016127 EMBL:AADN02016128 EMBL:AADN02016129
IPI:IPI00576498 Ensembl:ENSGALT00000016877 ArrayExpress:E1C514
Uniprot:E1C514
Length = 1050
Score = 250 (93.1 bits), Expect = 4.6e-19, P = 4.6e-19
Identities = 77/243 (31%), Positives = 116/243 (47%)
Query: 107 VETSAGN--MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTR-INFPSA 162
V T AG + + G H++ +S+ VFS G+ G LG V+ R I +
Sbjct: 78 VGTLAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGL-TTIEDAVTVPRLIKKLNQ 136
Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
++Q+S H + GQ FT G NS G P+ V++L G+P QV
Sbjct: 137 QTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVA 196
Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
AG + L++ G V G N+ GQLG D DR +P + L VV I+ G +
Sbjct: 197 AGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQ-KVVYISCGEEHTA 255
Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSS 341
+T +G V++FG+GS LGH +DE+ PR + G V +++ G H +A + SS
Sbjct: 256 VLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVSQIACGRHHTLAFVPSS 313
Query: 342 GYV 344
G +
Sbjct: 314 GMI 316
Score = 247 (92.0 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 67/244 (27%), Positives = 117/244 (47%)
Query: 102 HSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS 161
H ++ E + G G + L+ + V++CG + G LGH E ++ + +
Sbjct: 32 HDRNVKEVACG------GNHSVFLLEDGEVYTCGLNTKGQLGHESEGSKPAWVGTL---A 82
Query: 162 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
H+V V+ E+H+ + GQVF+ G S G + PRL++ L Q+
Sbjct: 83 GQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQI 142
Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
+ G L G T G N++GQLG G + + +P+ + L+ + + Q+AAG ++
Sbjct: 143 SCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGI-PLAQVAAGGAH 201
Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
A++ +G V+ +G S+ LG ++ D P ++ R + VV +S G+EH L
Sbjct: 202 SFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQ--KVVYISCGEEHTAVLTK 259
Query: 341 SGYV 344
SG V
Sbjct: 260 SGGV 263
Score = 220 (82.5 bits), Expect = 4.0e-15, P = 4.0e-15
Identities = 68/194 (35%), Positives = 95/194 (48%)
Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
+QI+ G +H L L ++ F+ G + G LG G E S R+ + QV+A
Sbjct: 140 LQISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGG 199
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
H+ + SG VF G NSS G D R P V+ L+ ++ G T LT
Sbjct: 200 AHSFALSLSGAVFGWGKNSSGQLGLSD-ERDRESPCHVKLLRSQKVVYISCGEEHTAVLT 258
Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
G V T G+ + GQLGH D P+ + LE +GS V QIA G + LA V +G++
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVSQIACGRHHTLAFVPSSGMI 316
Query: 291 YSFGSGSNFCLGHG 304
Y+FG G+ LG G
Sbjct: 317 YAFGCGTRGQLGTG 330
Score = 165 (63.1 bits), Expect = 7.4e-09, P = 7.4e-09
Identities = 48/150 (32%), Positives = 67/150 (44%)
Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
Q+ G H+ +S S +VF G + G LG E + S + + VV +S E
Sbjct: 194 QVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDR-ESPCHVKLLRSQKVVYISCGEE 252
Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFLT 232
H A + +SG VFT G S GH N + PR V L G Q+ G + T F+
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV-NPRRVLELMGSEVSQIACGRHHTLAFVP 311
Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
G ++ G T GQLG G T + P +
Sbjct: 312 SSGMIYAFGCGTRGQLGTGHTCNVKCPSPV 341
>UNIPROTKB|E2RFV1 [details] [associations]
symbol:HERC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:26091 KO:K10615 OMA:KLVIQPT
EMBL:AAEX03002773 RefSeq:XP_849808.1 Ensembl:ENSCAFT00000021413
GeneID:479225 KEGG:cfa:479225 NextBio:20854436 Uniprot:E2RFV1
Length = 1057
Score = 250 (93.1 bits), Expect = 4.6e-19, P = 4.6e-19
Identities = 76/252 (30%), Positives = 120/252 (47%)
Query: 98 QSVEHSSDIVETSAGNM-QITTGRYHTLLISNSS-VFSCGSSLCGVLGH-GPETTQCVSF 154
+S + +V A N+ ++ G HTL +++ V++ G G LG G E +C+
Sbjct: 70 KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127
Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
R I S +VQV+ H+ + ++ +VF G N G + P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSL 187
Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
G+P QV AG + LT+ G + G N GQLG D DR P + L +V
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR-TQKIVY 246
Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
I G + A+T G V++FG+G LGH E+ PR + F G V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304
Query: 334 HVVA-LDSSGYV 344
H A + SSG +
Sbjct: 305 HTSAFVPSSGRI 316
Score = 229 (85.7 bits), Expect = 3.3e-16, P = 3.3e-16
Identities = 78/251 (31%), Positives = 121/251 (48%)
Query: 70 IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
+YA G+ + Q+ LL G+ + +R ++++ SDI +Q+ G YH+L +S
Sbjct: 105 VYAWGLDSDGQLGLL----GS-EECIRVPRNIKSLSDIQI-----VQVACGYYHSLALSK 154
Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
+S VF G + G LG G + + S I +QV+A H+ + SG +F
Sbjct: 155 ASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW 214
Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
G N G D N + P L+++L+ + G + T LT G V T G+ +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
LGH T P+ + E +GS+V QIA G + A V +G +YSFG G N LG G
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331
Query: 306 QHDELQPRAIQ 316
+ P ++
Sbjct: 332 TSNRKSPFTVK 342
Score = 212 (79.7 bits), Expect = 3.5e-14, P = 3.5e-14
Identities = 62/228 (27%), Positives = 108/228 (47%)
Query: 119 GRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 177
G HT+ + + +V++CG + G LGH + ++ A ++V VS E H
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLA 98
Query: 178 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
+ GQV+ G +S G + I PR +++L + QV G + L+ V
Sbjct: 99 LNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEV 158
Query: 238 HTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
G N +GQLG G D + +P+ I L + +Q+AAG ++ +T +G ++ +G
Sbjct: 159 FCWGQNKYGQLGLGIDCKKQASPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRN 217
Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
LG +++D P +++ R + I V + G++H AL G V
Sbjct: 218 KFGQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGV 263
Score = 173 (66.0 bits), Expect = 9.6e-10, P = 9.6e-10
Identities = 63/213 (29%), Positives = 96/213 (45%)
Query: 135 GSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
G++ G LG G + V R +F V V H FVL G V+TCG N
Sbjct: 5 GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64
Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
GH + + +P V AL V+ G T L +G V+ G ++ GQLG G
Sbjct: 65 QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121
Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
P++I L ++ +VQ+A G + LA++ V+ +G LG G + +
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQAS 180
Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
P+ I++ GI ++V+AG H L SG +
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAI 211
Score = 159 (61.0 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 57/219 (26%), Positives = 99/219 (45%)
Query: 50 PQKFRSLVDLAASQL-CAL-HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIV 107
P+ +SL D+ Q+ C HS+ +S+ ++ + N + L + S ++
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSL--ALSKASEVFCWGQ-NKYGQLGLGIDCKKQASPQLI 184
Query: 108 ETSAGN--MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH 164
++ G MQ+ G H+ +++ S ++F G + G LG E + V +
Sbjct: 185 KSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVP-NLLKSLRTQK 243
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
+V + E+H A + + G VFT G GH T+ I PR V L G Q+ G
Sbjct: 244 IVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKVFELMGSIVTQIACG 302
Query: 225 LNFTG-FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
T F+ G +++ G +GQLG G T +R +P ++
Sbjct: 303 RQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 157 (60.3 bits), Expect = 5.8e-08, P = 5.8e-08
Identities = 50/161 (31%), Positives = 78/161 (48%)
Query: 187 CGDNSSFC-CGHRDTNRPI-FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
C N+SF G + I PR + + V GL T F+ G V+TCG N
Sbjct: 3 CWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCND 62
Query: 245 HGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH- 303
GQLGH + R P+ + L+ ++V ++ G ++ LA+ G VY++G S+ LG
Sbjct: 63 LGQLGHEKS--RKKPEQVVALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119
Query: 304 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
G + PR I++ I +V+V+ G H +AL + V
Sbjct: 120 GSEECIRVPRNIKSL--SDIQIVQVACGYYHSLALSKASEV 158
>UNIPROTKB|E1BAV2 [details] [associations]
symbol:HERC4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007283 "spermatogenesis" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0007283 GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:26091 KO:K10615 OMA:KLVIQPT
EMBL:DAAA02061808 EMBL:DAAA02061809 EMBL:DAAA02061810
IPI:IPI00839181 RefSeq:NP_001070362.2 UniGene:Bt.15687
Ensembl:ENSBTAT00000018639 GeneID:533336 KEGG:bta:533336
NextBio:20876005 ArrayExpress:E1BAV2 Uniprot:E1BAV2
Length = 1057
Score = 249 (92.7 bits), Expect = 6.5e-19, P = 6.5e-19
Identities = 75/252 (29%), Positives = 120/252 (47%)
Query: 98 QSVEHSSDIVETSAGNM-QITTGRYHTLLISNSS-VFSCGSSLCGVLGH-GPETTQCVSF 154
+S + +V A N+ ++ G HTL +++ V++ G G LG G E +C+
Sbjct: 70 KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127
Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
R I S +VQV+ H+ + ++ +VF G N G + P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSL 187
Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
G+P Q+ AG + LT+ G + G N GQLG D DR P + L +V
Sbjct: 188 LGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR-TQKIVY 246
Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
I G + A+T G V++FG+G LGH E+ PR + F G V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304
Query: 334 HVVA-LDSSGYV 344
H A + SSG +
Sbjct: 305 HTSAFVPSSGRI 316
Score = 228 (85.3 bits), Expect = 4.3e-16, P = 4.3e-16
Identities = 77/251 (30%), Positives = 121/251 (48%)
Query: 70 IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
+YA G+ + Q+ LL G+ + +R ++++ SDI +Q+ G YH+L +S
Sbjct: 105 VYAWGLDSDGQLGLL----GS-EECIRVPRNIKSLSDIQI-----VQVACGYYHSLALSK 154
Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
+S VF G + G LG G + + S I +Q++A H+ + SG +F
Sbjct: 155 ASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGW 214
Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
G N G D N + P L+++L+ + G + T LT G V T G+ +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
LGH T P+ + E +GS+V QIA G + A V +G +YSFG G N LG G
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331
Query: 306 QHDELQPRAIQ 316
+ P ++
Sbjct: 332 TSNRKSPFTVK 342
Score = 213 (80.0 bits), Expect = 2.7e-14, P = 2.7e-14
Identities = 63/228 (27%), Positives = 108/228 (47%)
Query: 119 GRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 177
G HT+ + + +V++CG + G LGH + ++ A ++V VS E H
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLA 98
Query: 178 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
+ GQV+ G +S G + I PR +++L + QV G + L+ V
Sbjct: 99 LNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEV 158
Query: 238 HTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
G N +GQLG G D + +P+ I L + +QIAAG ++ +T +G ++ +G
Sbjct: 159 FCWGQNKYGQLGLGIDCKKQASPQLIKSLLGI-PFMQIAAGGAHSFVLTLSGAIFGWGRN 217
Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
LG +++D P +++ R + I V + G++H AL G V
Sbjct: 218 KFGQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGV 263
Score = 172 (65.6 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 62/213 (29%), Positives = 96/213 (45%)
Query: 135 GSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
G++ G LG G + V R +F V V H FVL G V+TCG N
Sbjct: 5 GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64
Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
GH + + +P V AL V+ G T L +G V+ G ++ GQLG G
Sbjct: 65 QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121
Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
P++I L ++ +VQ+A G + LA++ V+ +G LG G + +
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQAS 180
Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
P+ I++ GI ++++AG H L SG +
Sbjct: 181 PQLIKSLL--GIPFMQIAAGGAHSFVLTLSGAI 211
Score = 160 (61.4 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 58/219 (26%), Positives = 99/219 (45%)
Query: 50 PQKFRSLVDLAASQL-CAL-HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIV 107
P+ +SL D+ Q+ C HS+ +S+ ++ + N + L + S ++
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSL--ALSKASEVFCWGQ-NKYGQLGLGIDCKKQASPQLI 184
Query: 108 ETSAGN--MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH 164
++ G MQI G H+ +++ S ++F G + G LG E + V +
Sbjct: 185 KSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVP-NLLKSLRTQK 243
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
+V + E+H A + + G VFT G GH T+ I PR V L G Q+ G
Sbjct: 244 IVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKVFELMGSIVTQIACG 302
Query: 225 LNFTG-FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
T F+ G +++ G +GQLG G T +R +P ++
Sbjct: 303 RQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 157 (60.3 bits), Expect = 5.8e-08, P = 5.8e-08
Identities = 50/161 (31%), Positives = 78/161 (48%)
Query: 187 CGDNSSFC-CGHRDTNRPI-FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
C N+SF G + I PR + + V GL T F+ G V+TCG N
Sbjct: 3 CWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCND 62
Query: 245 HGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH- 303
GQLGH + R P+ + L+ ++V ++ G ++ LA+ G VY++G S+ LG
Sbjct: 63 LGQLGHEKS--RKKPEQVVALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119
Query: 304 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
G + PR I++ I +V+V+ G H +AL + V
Sbjct: 120 GSEECIRVPRNIKSL--SDIQIVQVACGYYHSLALSKASEV 158
>UNIPROTKB|O95714 [details] [associations]
symbol:HERC2 "E3 ubiquitin-protein ligase HERC2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0020037 "heme binding" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=NAS] [GO:0006886 "intracellular protein transport"
evidence=NAS] [GO:0006281 "DNA repair" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IPI] [GO:0032183 "SUMO binding"
evidence=IDA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS00191 PROSITE:PS01357 PROSITE:PS50082
PROSITE:PS50135 PROSITE:PS50237 PROSITE:PS50255 PROSITE:PS50294
PROSITE:PS51416 SMART:SM00119 SMART:SM00291 UniPathway:UPA00143
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
Reactome:REACT_6900 GO:GO:0006886 GO:GO:0005814 PROSITE:PS00678
GO:GO:0005743 GO:GO:0046872 GO:GO:0008270 GO:GO:0006281
GO:GO:0007283 GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0005085 Gene3D:3.10.120.10 SUPFAM:SSF55856
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939
Pfam:PF03256 PROSITE:PS51284 GO:GO:0042787 GO:GO:0032183
Gene3D:2.30.30.30 InterPro:IPR021097 InterPro:IPR014722
Pfam:PF11515 SUPFAM:SSF56204 eggNOG:COG5021 CTD:8924 KO:K10595
OMA:QLAFTRD EMBL:AF071172 EMBL:AC091304 EMBL:AC126332 EMBL:AC135329
EMBL:AF224243 EMBL:AF224242 EMBL:AF224245 EMBL:AF224244
EMBL:AF224249 EMBL:AF224246 EMBL:AF224247 EMBL:AF224248
EMBL:AF224251 EMBL:AF224250 EMBL:AF224255 EMBL:AF224254
EMBL:AF224252 EMBL:AF224253 EMBL:AF224257 EMBL:AF224256
EMBL:AF225401 EMBL:AF225400 EMBL:AF225404 EMBL:AF225402
EMBL:AF225403 EMBL:AF225407 EMBL:AF225405 EMBL:AF225406
EMBL:AF225409 EMBL:AF225408 IPI:IPI00005826 RefSeq:NP_004658.3
UniGene:Hs.434890 UniGene:Hs.610412 UniGene:Hs.741019 PDB:2KEO
PDB:3KCI PDBsum:2KEO PDBsum:3KCI ProteinModelPortal:O95714
SMR:O95714 DIP:DIP-37632N IntAct:O95714 STRING:O95714
PhosphoSite:O95714 PaxDb:O95714 PRIDE:O95714
Ensembl:ENST00000261609 GeneID:8924 KEGG:hsa:8924 UCSC:uc001zbj.3
GeneCards:GC15M028356 H-InvDB:HIX0012044 H-InvDB:HIX0017540
H-InvDB:HIX0038121 H-InvDB:HIX0038320 H-InvDB:HIX0038830
H-InvDB:HIX0173226 H-InvDB:HIX0173299 H-InvDB:HIX0194348
HGNC:HGNC:4868 HPA:CAB017188 MIM:227220 MIM:605837
neXtProt:NX_O95714 PharmGKB:PA29243 HOVERGEN:HBG081598
InParanoid:O95714 OrthoDB:EOG41C6V9 PhylomeDB:O95714
EvolutionaryTrace:O95714 GenomeRNAi:8924 NextBio:33552
ArrayExpress:O95714 Bgee:O95714 Genevestigator:O95714
GermOnline:ENSG00000128731 InterPro:IPR006624 SMART:SM00706
Uniprot:O95714
Length = 4834
Score = 253 (94.1 bits), Expect = 7.7e-19, P = 7.7e-19
Identities = 83/302 (27%), Positives = 141/302 (46%)
Query: 50 PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
P + L +L +Q+ + +SRN ++ N + + +Q + S +IV+
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRV-YTQAYNSD-TLAPQLVQGLA-SRNIVKI 498
Query: 110 SAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG---P-ETTQCVS-FTRINFPSAAH 164
+A + G ++ L + V+S G G LGHG P E + +S F+ + H
Sbjct: 499 AAHS----DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFS--GKQAGKH 552
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
VV ++ ++A + G+++T G + GH + P LV LKG+ V G
Sbjct: 553 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACG 611
Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
L + G V + G +G+LG G + TPK I L+++ VV++ G + +
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSI 670
Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
A+T +G VYS+G G N LGHG + P+ ++ + K V+ V+AG H +AL
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGK--KVIDVAAGSTHCLALTEDS 728
Query: 343 YV 344
V
Sbjct: 729 EV 730
Score = 245 (91.3 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 74/228 (32%), Positives = 107/228 (46%)
Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
GR+ T L + VFS G G LGH C I + ++ +H+A +
Sbjct: 3056 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 3114
Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
SG+++T G GH D N +P++V+ L G QV G T LT G
Sbjct: 3115 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3173
Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
V + G G+LG G + P++I L G V QI G + LA+T +GVV+++G G
Sbjct: 3174 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3232
Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
F LGHG +P+ ++ R K I V V+ G H +A+ SG V
Sbjct: 3233 DYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCLAVTDSGQV 3278
Score = 245 (91.3 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 76/250 (30%), Positives = 117/250 (46%)
Query: 97 LQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR 156
L+S++H ++ A N + G++ L S V+S G + G LGHG + C
Sbjct: 4031 LESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRV 4084
Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
I VV V+A H+A V +G ++T G GH D+ + +P+LVEAL+G
Sbjct: 4085 IESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGH 4143
Query: 217 PCKQVTAGLNF--TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 274
+ G T LT V + G +G+LG G + P I L +G VV++
Sbjct: 4144 RVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKV 4202
Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 334
G + +A+T +G VY++G G LGHG +PR +Q + K V+ ++ G H
Sbjct: 4203 ECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGK--KVIAIATGSLH 4260
Query: 335 VVALDSSGYV 344
V G V
Sbjct: 4261 CVCCTEDGEV 4270
Score = 228 (85.3 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 75/246 (30%), Positives = 121/246 (49%)
Query: 108 ET-SAGNM-QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH 164
ET SA N+ Q+ G ++ V++CG + G LG G ++ V R +++
Sbjct: 2987 ETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSSY 3045
Query: 165 VVQ---VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
VV+ V + HA + G+VF+ G+ GH + +PRL+EALK + +
Sbjct: 3046 VVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDI 3104
Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGP-- 278
G + + LT G ++T G +G+LGHGD + PK + L +G V+Q+A G
Sbjct: 3105 ACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRD 3162
Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
+ LA+T G+V+S+G G LG G P+ I+ +G V ++ G + +AL
Sbjct: 3163 AQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG--VCQIECGAQFSLAL 3220
Query: 339 DSSGYV 344
SG V
Sbjct: 3221 TKSGVV 3226
Score = 227 (85.0 bits), Expect = 3.5e-15, P = 3.5e-15
Identities = 70/224 (31%), Positives = 110/224 (49%)
Query: 127 SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV----VQVSASENHAAFVLQSG 182
++ +++ G G LG G T+ VS T S HV V V++ H + G
Sbjct: 4002 ADGKLYATGYGAGGRLGIGG--TESVS-TPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4058
Query: 183 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
+V++ G+ GH + + P RPR++E+L+G+ V AG + +T G ++T G
Sbjct: 4059 EVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGK 4117
Query: 243 NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLAVTGNGVVYSFGSGSNFC 300
+G+LGH D+ D+ PK + L+ VV IA +G + L +T + V+S+G G
Sbjct: 4118 GRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 4176
Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
LG G P I + G+ VV+V G + VAL SG V
Sbjct: 4177 LGRGGSDGCKVPMKIDSLT--GLGVVKVECGSQFSVALTKSGAV 4218
Score = 201 (75.8 bits), Expect = 3.8e-12, P = 3.8e-12
Identities = 66/225 (29%), Positives = 100/225 (44%)
Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
I G H+ L S+ +++ G G LGHG TTQ + + V+QV+
Sbjct: 3104 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3162
Query: 175 AAFVL--QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
A + G VF+ GD G R + P+ +E L G Q+ G F+ LT
Sbjct: 3163 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3221
Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
G V T G + +LGHG + P+ + L +V +A G + LAVT +G VY+
Sbjct: 3222 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGK-KIVHVAVGALHCLAVTDSGQVYA 3280
Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
+G + G+G +P +Q +G + RV+ G H VA
Sbjct: 3281 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3323
Score = 169 (64.5 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 53/184 (28%), Positives = 89/184 (48%)
Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
++ +++ A+ +A +++ +VF G N G ++ I P E L + Q
Sbjct: 2939 NSGSLIRKKAAGLESAATIRT-KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQ 2996
Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEE-VGSVVQIAAGP 278
V G +T+ G V+ CG T+G+LG G + P P+ I L V V + +G
Sbjct: 2997 VAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGG 3056
Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
+ A+T +G V+S+G G + LGH + + +PR I+ + K I ++ G H AL
Sbjct: 3057 RHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAAL 3114
Query: 339 DSSG 342
SSG
Sbjct: 3115 TSSG 3118
Score = 167 (63.8 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 63/260 (24%), Positives = 112/260 (43%)
Query: 84 NRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLG 143
NR + RV+ L+ +E +V+ +AG G + + + +++ G G LG
Sbjct: 4075 NRSPCDRPRVIESLRGIE----VVDVAAG------GAHSACVTAAGDLYTWGKGRYGRLG 4124
Query: 144 HGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ--VFTCGDNSSFCCGHRDTN 201
H Q + + VV ++ A + + V++ GD G R +
Sbjct: 4125 HSDSEDQ-LKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG-RGGS 4182
Query: 202 RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 261
P +++L G+ +V G F+ LT G V+T G + +LGHG P+
Sbjct: 4183 DGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQ 4242
Query: 262 IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 321
+ L+ V+ IA G + + T +G VY++G LG G + +PR + + K
Sbjct: 4243 VQGLQGK-KVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGK 4301
Query: 322 GIHVVRVSAGDEHVVALDSS 341
++ RV+ G H +A +S
Sbjct: 4302 KVN--RVACGSAHTLAWSTS 4319
Score = 164 (62.8 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 58/224 (25%), Positives = 100/224 (44%)
Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF--V 178
Y + + +++ G G LGHG + + V+ V+ A V
Sbjct: 562 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAV 620
Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
++GQV++ GD G R + P+L+E L+ + +V G F+ LT G V+
Sbjct: 621 TENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 679
Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
+ G + +LGHG PK + L+ V+ +AAG ++ LA+T + V+S+GS
Sbjct: 680 SWGKGDNQRLGHGTEEHVRYPKLLEGLQGK-KVIDVAAGSTHCLALTEDSEVHSWGSNDQ 738
Query: 299 FCLGHGE--QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
C H + + + +P A+ K H+V ++ G A S
Sbjct: 739 -CQ-HFDTLRVTKPEPAALPGLDTK--HIVGIACGPAQSFAWSS 778
Score = 153 (58.9 bits), Expect = 8.8e-07, P = 8.8e-07
Identities = 48/163 (29%), Positives = 77/163 (47%)
Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
SG ++ G N G + + + P EAL + Q+ G +T G ++
Sbjct: 3951 SGTIYGWGHNHRGQLGGIEGAK-VKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4009
Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
G G+LG G T TP + ++ V V + +G + LA++ G VYS+G +
Sbjct: 4010 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4069
Query: 300 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
LGHG + +PR I++ R GI VV V+AG H + ++G
Sbjct: 4070 KLGHGNRSPCDRPRVIESLR--GIEVVDVAAGGAHSACVTAAG 4110
Score = 149 (57.5 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 48/164 (29%), Positives = 74/164 (45%)
Query: 123 TLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQS 181
TL +++ VFS G G LG G + C I + V Q+ + + +S
Sbjct: 3165 TLALTDEGLVFSWGDGDFGKLGRGG-SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKS 3223
Query: 182 GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 241
G V+T G F GH ++ + +P++VE L+G V G +T G V+ G
Sbjct: 3224 GVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWG 3282
Query: 242 SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
N HGQ G+G T P + LE + ++A G S+ +A T
Sbjct: 3283 DNDHGQQGNGTTTVNRKPTLVQGLEGQ-KITRVACGSSHSVAWT 3325
Score = 145 (56.1 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 52/169 (30%), Positives = 76/169 (44%)
Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
+G TL ++ N V+S G G LG G + C + I VV+V +
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670
Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
+ + GQV++ G + GH T + P+L+E L+G V AG LT
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729
Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
VH+ GSN Q H DTL +P P ++ L+ +V IA GP+ A
Sbjct: 730 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGLD-TKHIVGIACGPAQSFA 775
Score = 129 (50.5 bits), Expect = 0.00038, P = 0.00038
Identities = 37/113 (32%), Positives = 57/113 (50%)
Query: 235 GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
G ++ G N GQLG G + PTP +++A L V Q+ G + AVT +G +Y
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4007
Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
+ G G+ LG G P +++ + I V V++G +H +AL S G V
Sbjct: 4008 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4060
Score = 40 (19.1 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 13/63 (20%), Positives = 27/63 (42%)
Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
+ L+ G+G +Y +G LG E P + + V++ G++ + A+
Sbjct: 3944 WTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAT--LRPVQLIGGEQTLFAVT 4001
Query: 340 SSG 342
+ G
Sbjct: 4002 ADG 4004
>UNIPROTKB|E2RDC2 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0032183 "SUMO binding" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0020037 "heme
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005743
GO:GO:0046872 GO:GO:0008270 GO:GO:0006281 GO:GO:0007283
GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
Gene3D:2.30.30.30 InterPro:IPR021097 InterPro:IPR014722
Pfam:PF11515 SUPFAM:SSF56204 GeneTree:ENSGT00700000104208 CTD:8924
KO:K10595 OMA:QLAFTRD InterPro:IPR006624 SMART:SM00706
EMBL:AAEX03002160 EMBL:AAEX03002161 EMBL:AAEX03002162
RefSeq:XP_536160.2 ProteinModelPortal:E2RDC2
Ensembl:ENSCAFT00000015697 GeneID:479005 KEGG:cfa:479005
Uniprot:E2RDC2
Length = 4837
Score = 253 (94.1 bits), Expect = 7.7e-19, P = 7.7e-19
Identities = 83/302 (27%), Positives = 141/302 (46%)
Query: 50 PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
P + L +L +Q+ + +SRN ++ N + + +Q + S +IV+
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRV-YTQAYNSD-TLAPQLVQGLA-SRNIVKI 499
Query: 110 SAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG---P-ETTQCVS-FTRINFPSAAH 164
+A + G ++ L + V+S G G LGHG P E + +S F+ + H
Sbjct: 500 AAHS----DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFS--GKQAGKH 553
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
VV ++ ++A + G+++T G + GH + P LV LKG+ V G
Sbjct: 554 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACG 612
Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
L + G V + G +G+LG G + TPK I L+++ VV++ G + +
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSI 671
Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
A+T +G VYS+G G N LGHG + P+ ++ + K V+ V+AG H +AL
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGK--KVIDVAAGSTHCLALTEDS 729
Query: 343 YV 344
V
Sbjct: 730 EV 731
Score = 246 (91.7 bits), Expect = 5.8e-17, Sum P(2) = 5.8e-17
Identities = 77/250 (30%), Positives = 117/250 (46%)
Query: 97 LQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR 156
L+S++H ++ A N + G++ L S V+S G + G LGHG + C
Sbjct: 4034 LESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRV 4087
Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
I VV V+A H+A V +G ++T G GH D+ + +P+LVEAL+G
Sbjct: 4088 IESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGH 4146
Query: 217 PCKQVTAGLNF--TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 274
V G T LT V + G +G+LG G + P I L +G VV++
Sbjct: 4147 RVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKV 4205
Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 334
G + +A+T +G VY++G G LGHG +PR +Q + K V+ ++ G H
Sbjct: 4206 ECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGK--KVIAIATGSLH 4263
Query: 335 VVALDSSGYV 344
V G V
Sbjct: 4264 CVCCTEDGEV 4273
Score = 242 (90.2 bits), Expect = 4.3e-17, P = 4.3e-17
Identities = 73/228 (32%), Positives = 107/228 (46%)
Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
GR+ T L + VFS G G LGH C I + ++ +H+A +
Sbjct: 3057 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 3115
Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
SG+++T G GH D N +P++V+ L G QV G T LT G
Sbjct: 3116 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3174
Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
V + G G+LG G + P++I L G V QI G + LA+T +GVV+++G G
Sbjct: 3175 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3233
Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
F LGHG +P+ ++ R K I V V+ G H +A+ +G V
Sbjct: 3234 DYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCLAVTDAGQV 3279
Score = 228 (85.3 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 75/246 (30%), Positives = 121/246 (49%)
Query: 108 ET-SAGNM-QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH 164
ET SA N+ Q+ G ++ V++CG + G LG G ++ V R +++
Sbjct: 2988 ETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGL-SSGTVPIPRQITALSSY 3046
Query: 165 VVQ---VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
VV+ V + HA + G+VF+ G+ GH + +PRL+EALK + +
Sbjct: 3047 VVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDI 3105
Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGP-- 278
G + + LT G ++T G +G+LGHGD + PK + L +G V+Q+A G
Sbjct: 3106 ACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRD 3163
Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
+ LA+T G+V+S+G G LG G P+ I+ +G V ++ G + +AL
Sbjct: 3164 AQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG--VCQIECGAQFSLAL 3221
Query: 339 DSSGYV 344
SG V
Sbjct: 3222 TKSGVV 3227
Score = 226 (84.6 bits), Expect = 5.8e-14, Sum P(2) = 5.8e-14
Identities = 69/224 (30%), Positives = 110/224 (49%)
Query: 127 SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV----VQVSASENHAAFVLQSG 182
++ +++ G G LG G T+ VS T S HV V V++ H + G
Sbjct: 4005 ADGKLYATGYGAGGRLGIGG--TESVS-TPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4061
Query: 183 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
+V++ G+ GH + + P RPR++E+L+G+ V AG + +T G ++T G
Sbjct: 4062 EVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGK 4120
Query: 243 NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLAVTGNGVVYSFGSGSNFC 300
+G+LGH D+ D+ PK + L+ VV +A +G + L +T + V+S+G G
Sbjct: 4121 GRYGRLGHSDSEDQLKPKLVEALQG-HRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGK 4179
Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
LG G P I + G+ VV+V G + VAL SG V
Sbjct: 4180 LGRGGSDGCKVPMKIDSLT--GLGVVKVECGSQFSVALTKSGAV 4221
Score = 198 (74.8 bits), Expect = 8.3e-12, P = 8.3e-12
Identities = 66/225 (29%), Positives = 99/225 (44%)
Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
I G H+ L S+ +++ G G LGHG TTQ + + V+QV+
Sbjct: 3105 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3163
Query: 175 AAFVL--QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
A + G VF+ GD G R + P+ +E L G Q+ G F+ LT
Sbjct: 3164 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3222
Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
G V T G + +LGHG + P+ + L +V +A G + LAVT G VY+
Sbjct: 3223 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGK-KIVHVAVGALHCLAVTDAGQVYA 3281
Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
+G + G+G +P +Q +G + RV+ G H VA
Sbjct: 3282 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3324
Score = 168 (64.2 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 53/184 (28%), Positives = 89/184 (48%)
Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
++ +++ A+ +A +++ +VF G N G ++ I P E L + Q
Sbjct: 2940 NSGSLIRKKAAGLESAATIRT-KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQ 2997
Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEE-VGSVVQIAAGP 278
V G +T+ G V+ CG T+G+LG G + P P+ I L V V + +G
Sbjct: 2998 VAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGG 3057
Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
+ A+T +G V+S+G G + LGH + + +PR I+ + K I ++ G H AL
Sbjct: 3058 RHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAAL 3115
Query: 339 DSSG 342
SSG
Sbjct: 3116 TSSG 3119
Score = 168 (64.2 bits), Expect = 4.7e-07, Sum P(2) = 4.7e-07
Identities = 64/260 (24%), Positives = 112/260 (43%)
Query: 84 NRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLG 143
NR + RV+ L+ +E +V+ +AG G + + + +++ G G LG
Sbjct: 4078 NRSPCDRPRVIESLRGIE----VVDVAAG------GAHSACVTAAGDLYTWGKGRYGRLG 4127
Query: 144 HGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ--VFTCGDNSSFCCGHRDTN 201
H Q + + VV V+ A + + V++ GD G R +
Sbjct: 4128 HSDSEDQ-LKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLG-RGGS 4185
Query: 202 RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 261
P +++L G+ +V G F+ LT G V+T G + +LGHG P+
Sbjct: 4186 DGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQ 4245
Query: 262 IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 321
+ L+ V+ IA G + + T +G VY++G LG G + +PR + + K
Sbjct: 4246 VQGLQGK-KVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGK 4304
Query: 322 GIHVVRVSAGDEHVVALDSS 341
++ RV+ G H +A +S
Sbjct: 4305 KVN--RVACGSAHTLAWSTS 4322
Score = 164 (62.8 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 58/224 (25%), Positives = 100/224 (44%)
Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF--V 178
Y + + +++ G G LGHG + + V+ V+ A V
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAV 621
Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
++GQV++ GD G R + P+L+E L+ + +V G F+ LT G V+
Sbjct: 622 TENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 680
Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
+ G + +LGHG PK + L+ V+ +AAG ++ LA+T + V+S+GS
Sbjct: 681 SWGKGDNQRLGHGTEEHVRYPKLLEGLQGK-KVIDVAAGSTHCLALTEDSEVHSWGSNDQ 739
Query: 299 FCLGHGE--QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
C H + + + +P A+ K H+V ++ G A S
Sbjct: 740 -CQ-HFDTLRVTKPEPAALPGLDTK--HIVGIACGPAQSFAWSS 779
Score = 153 (58.9 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 48/163 (29%), Positives = 77/163 (47%)
Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
SG ++ G N G + + + P EAL + Q+ G +T G ++
Sbjct: 3954 SGTIYGWGHNHRGQLGGIEGAK-VKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4012
Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
G G+LG G T TP + ++ V V + +G + LA++ G VYS+G +
Sbjct: 4013 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4072
Query: 300 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
LGHG + +PR I++ R GI VV V+AG H + ++G
Sbjct: 4073 KLGHGNRSPCDRPRVIESLR--GIEVVDVAAGGAHSACVTAAG 4113
Score = 149 (57.5 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 48/164 (29%), Positives = 74/164 (45%)
Query: 123 TLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQS 181
TL +++ VFS G G LG G + C I + V Q+ + + +S
Sbjct: 3166 TLALTDEGLVFSWGDGDFGKLGRGG-SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKS 3224
Query: 182 GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 241
G V+T G F GH ++ + +P++VE L+G V G +T G V+ G
Sbjct: 3225 GVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWG 3283
Query: 242 SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
N HGQ G+G T P + LE + ++A G S+ +A T
Sbjct: 3284 DNDHGQQGNGTTTVNRKPTLVQGLEGQ-KITRVACGSSHSVAWT 3326
Score = 145 (56.1 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 52/169 (30%), Positives = 76/169 (44%)
Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
+G TL ++ N V+S G G LG G + C + I VV+V +
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDGCKTPKLIEKLQDLDVVKVRCGSQFSI 671
Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
+ + GQV++ G + GH T + P+L+E L+G V AG LT
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730
Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
VH+ GSN Q H DTL +P P ++ L+ +V IA GP+ A
Sbjct: 731 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGLD-TKHIVGIACGPAQSFA 776
Score = 40 (19.1 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 13/63 (20%), Positives = 27/63 (42%)
Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
+ L+ G+G +Y +G LG E P + + V++ G++ + A+
Sbjct: 3947 WTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAT--LRPVQLIGGEQTLFAVT 4004
Query: 340 SSG 342
+ G
Sbjct: 4005 ADG 4007
Score = 38 (18.4 bits), Expect = 5.8e-17, Sum P(2) = 5.8e-17
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 36 ELTSKTFGGSHGLYPQKFRSLVDLAASQL 64
E+ S G YPQ L++L ++L
Sbjct: 3570 EVLSAVLSGMGTAYPQVADMLLELCVTEL 3598
>UNIPROTKB|F1N1N9 [details] [associations]
symbol:HERC5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050688 "regulation of defense response to virus"
evidence=IEA] [GO:0042296 "ISG15 ligase activity" evidence=IEA]
[GO:0032020 "ISG15-protein conjugation" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0050688 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:KDWITNT GO:GO:0042296
GO:GO:0032020 EMBL:DAAA02017014 IPI:IPI00907336
Ensembl:ENSBTAT00000052811 Uniprot:F1N1N9
Length = 959
Score = 248 (92.4 bits), Expect = 7.9e-19, P = 7.9e-19
Identities = 75/224 (33%), Positives = 109/224 (48%)
Query: 99 SVEHSS-DIVETSAGNMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTR 156
S+EH+ + +QIT G YH+L +S +F+ G +L G LG G +
Sbjct: 135 SIEHARFQCILQEKNIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEI 194
Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR--PRLVEALK 214
+ S +VQ+SA E H+ + SG V++ G N CG + P +EAL
Sbjct: 195 VENLSGVPLVQISAGEAHSMALSMSGNVYSWGRND---CGQLGLGHTYNKESPSCIEALD 251
Query: 215 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQ 273
+ + G T LT G V T G +GQLGH T + P+ + L VG+ V Q
Sbjct: 252 DQKVEFLACGGCHTALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGL--VGNRVTQ 309
Query: 274 IAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
IA G + LA V+ G V+SFGSG LG+G ++L PR ++
Sbjct: 310 IACGRQHTLAYVSDTGKVFSFGSGKEGQLGNGGTRNQLIPRPMK 353
Score = 224 (83.9 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 54/182 (29%), Positives = 96/182 (52%)
Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
+++Q++ + H+ + + G++F G N G P +VE L GVP Q++A
Sbjct: 149 NIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISA 208
Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
G + L++ G+V++ G N GQLG G T ++ +P I L++ V +A G +
Sbjct: 209 GEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQ-KVEFLACGGCHTAL 267
Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSG 342
+T +G+V++FG G LGH +EL+PR + G V +++ G +H +A + +G
Sbjct: 268 LTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGL--VGNRVTQIACGRQHTLAYVSDTG 325
Query: 343 YV 344
V
Sbjct: 326 KV 327
>UNIPROTKB|Q9UII4 [details] [associations]
symbol:HERC5 "E3 ISG15--protein ligase HERC5" species:9606
"Homo sapiens" [GO:0051607 "defense response to virus"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0005737
"cytoplasm" evidence=IBA] [GO:0042787 "protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IBA] [GO:0032020 "ISG15-protein conjugation" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0042296 "ISG15
ligase activity" evidence=IDA] [GO:0050688 "regulation of defense
response to virus" evidence=IDA] [GO:0000079 "regulation of
cyclin-dependent protein serine/threonine kinase activity"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0019221
"cytokine-mediated signaling pathway" evidence=TAS] [GO:0032480
"negative regulation of type I interferon production" evidence=TAS]
[GO:0045087 "innate immune response" evidence=TAS] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 EMBL:AY337518
EMBL:AB027289 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829
GO:GO:0005634 GO:GO:0048471 Reactome:REACT_6900 GO:GO:0000079
GO:GO:0045087 GO:GO:0019221 GO:GO:0051607 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
GO:GO:0032480 GO:GO:0050688 SUPFAM:SSF56204 eggNOG:COG5021
HOGENOM:HOG000208452 HOVERGEN:HBG050878 EMBL:AC083829 EMBL:BC140716
IPI:IPI00008821 RefSeq:NP_057407.2 UniGene:Hs.26663
ProteinModelPortal:Q9UII4 SMR:Q9UII4 DIP:DIP-44200N IntAct:Q9UII4
STRING:Q9UII4 PhosphoSite:Q9UII4 DMDM:296434523 PaxDb:Q9UII4
PRIDE:Q9UII4 Ensembl:ENST00000264350 GeneID:51191 KEGG:hsa:51191
UCSC:uc003hrt.3 CTD:51191 GeneCards:GC04P089378 H-InvDB:HIX0200636
HGNC:HGNC:24368 HPA:HPA043929 MIM:608242 neXtProt:NX_Q9UII4
PharmGKB:PA134973940 InParanoid:Q9UII4 OMA:KDWITNT
OrthoDB:EOG4N30N6 PhylomeDB:Q9UII4 GenomeRNAi:51191 NextBio:54182
ArrayExpress:Q9UII4 Bgee:Q9UII4 CleanEx:HS_HERC5
Genevestigator:Q9UII4 GermOnline:ENSG00000138646 GO:GO:0042296
GO:GO:0032020 Uniprot:Q9UII4
Length = 1024
Score = 248 (92.4 bits), Expect = 8.8e-19, P = 8.8e-19
Identities = 70/208 (33%), Positives = 105/208 (50%)
Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
+QIT G YH+L +S +F+ G +L G LG G + + + + + Q+SA E
Sbjct: 141 IQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGE 200
Query: 173 NHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
H+ + SG +++ G N GH ++ P L+E L + V G + +
Sbjct: 201 AHSMALSMSGNIYSWGKNECGQLGLGHTESKDD---PSLIEGLDNQKVEFVACGGSHSAL 257
Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLA-VTGNG 288
LT G + T G+ HGQLGH T + P +A L VG V QIA G + LA V+ G
Sbjct: 258 LTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAEL--VGYRVTQIACGRWHTLAYVSDLG 315
Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
V+SFGSG + LG+G D+L P ++
Sbjct: 316 KVFSFGSGKDGQLGNGGTRDQLMPLPVK 343
Score = 209 (78.6 bits), Expect = 7.5e-14, P = 7.5e-14
Identities = 50/173 (28%), Positives = 90/173 (52%)
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
++Q++ + H+ + + G++F G N G P++VE L GVP Q++AG
Sbjct: 140 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAG 199
Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
+ L++ G++++ G N GQLG G T + P I L+ V +A G S+ +
Sbjct: 200 EAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQ-KVEFVACGGSHSALL 258
Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
T +G++++FG+G + LGH +EL+P + G V +++ G H +A
Sbjct: 259 TQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAEL--VGYRVTQIACGRWHTLA 309
Score = 122 (48.0 bits), Expect = 0.00041, P = 0.00041
Identities = 38/126 (30%), Positives = 59/126 (46%)
Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGP 278
Q+T G + L+ G + G N HGQLG G TP+ + L V + QI+AG
Sbjct: 142 QITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGV-PLAQISAGE 200
Query: 279 SYMLAVTGNGVVYSFGSGS--NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
++ +A++ +G +YS+G LGH E D+ P I+ + + V + G H
Sbjct: 201 AHSMALSMSGNIYSWGKNECGQLGLGHTESKDD--PSLIEGLDNQKVEFV--ACGGSHSA 256
Query: 337 ALDSSG 342
L G
Sbjct: 257 LLTQDG 262
>UNIPROTKB|F1NBC5 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 EMBL:AADN02016126 EMBL:AADN02016127
EMBL:AADN02016128 EMBL:AADN02016129 IPI:IPI00572483
Ensembl:ENSGALT00000016878 ArrayExpress:F1NBC5 Uniprot:F1NBC5
Length = 1050
Score = 248 (92.4 bits), Expect = 9.1e-19, P = 9.1e-19
Identities = 67/244 (27%), Positives = 117/244 (47%)
Query: 102 HSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS 161
H ++ E + G G + L+ + V++CG + G LGH E ++ + +
Sbjct: 32 HDRNVKEVACG------GNHSVFLLEDGEVYTCGLNTKGQLGHESEGSKPEPIGAL---A 82
Query: 162 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
H+V V+ E+H+ + GQVF+ G S G + PRL++ L Q+
Sbjct: 83 GQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQI 142
Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
+ G L G T G N++GQLG G + + +P+ + L+ + + Q+AAG ++
Sbjct: 143 SCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGI-PLAQVAAGGAH 201
Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
A++ +G V+ +G S+ LG ++ D P ++ R + VV +S G+EH L
Sbjct: 202 SFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQ--KVVYISCGEEHTAVLTK 259
Query: 341 SGYV 344
SG V
Sbjct: 260 SGGV 263
Score = 246 (91.7 bits), Expect = 1.9e-18, P = 1.9e-18
Identities = 73/234 (31%), Positives = 112/234 (47%)
Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
+ + G H++ +S+ VFS G+ G LG V+ R I + ++Q+S
Sbjct: 87 VHVACGESHSVALSDQGQVFSWGAGSDGQLGL-TTIEDAVTVPRLIKKLNQQTILQISCG 145
Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
H + GQ FT G NS G P+ V++L G+P QV AG + L
Sbjct: 146 NWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFAL 205
Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
++ G V G N+ GQLG D DR +P + L VV I+ G + +T +G V+
Sbjct: 206 SLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQ-KVVYISCGEEHTAVLTKSGGVF 264
Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYV 344
+FG+GS LGH +DE+ PR + G V +++ G H +A + SSG +
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVSQIACGRHHTLAFVPSSGMI 316
Score = 220 (82.5 bits), Expect = 4.0e-15, P = 4.0e-15
Identities = 68/194 (35%), Positives = 95/194 (48%)
Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
+QI+ G +H L L ++ F+ G + G LG G E S R+ + QV+A
Sbjct: 140 LQISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGG 199
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
H+ + SG VF G NSS G D R P V+ L+ ++ G T LT
Sbjct: 200 AHSFALSLSGAVFGWGKNSSGQLGLSD-ERDRESPCHVKLLRSQKVVYISCGEEHTAVLT 258
Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
G V T G+ + GQLGH D P+ + LE +GS V QIA G + LA V +G++
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVSQIACGRHHTLAFVPSSGMI 316
Query: 291 YSFGSGSNFCLGHG 304
Y+FG G+ LG G
Sbjct: 317 YAFGCGTRGQLGTG 330
Score = 165 (63.1 bits), Expect = 7.4e-09, P = 7.4e-09
Identities = 48/150 (32%), Positives = 67/150 (44%)
Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
Q+ G H+ +S S +VF G + G LG E + S + + VV +S E
Sbjct: 194 QVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDR-ESPCHVKLLRSQKVVYISCGEE 252
Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFLT 232
H A + +SG VFT G S GH N + PR V L G Q+ G + T F+
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV-NPRRVLELMGSEVSQIACGRHHTLAFVP 311
Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
G ++ G T GQLG G T + P +
Sbjct: 312 SSGMIYAFGCGTRGQLGTGHTCNVKCPSPV 341
>TAIR|locus:2165770 [details] [associations]
symbol:AT5G42140 "AT5G42140" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005576
"extracellular region" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=ISS] [GO:0008536 "Ran GTPase binding" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007165 "signal
transduction" evidence=ISS] [GO:0035091 "phosphatidylinositol
binding" evidence=ISS] InterPro:IPR000306 Pfam:PF01363
SMART:SM00064 INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0046872 EMBL:AB017067 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.30.40.10 InterPro:IPR017455
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
PROSITE:PS50178 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 InterPro:IPR013591 Pfam:PF08381 PROSITE:PS51514
HSSP:Q15075 ProtClustDB:CLSN2686442 IPI:IPI00533393
RefSeq:NP_199029.1 UniGene:At.28039 ProteinModelPortal:Q9FHX1
SMR:Q9FHX1 PRIDE:Q9FHX1 EnsemblPlants:AT5G42140.1 GeneID:834219
KEGG:ath:AT5G42140 TAIR:At5g42140 HOGENOM:HOG000240974
InParanoid:Q9FHX1 OMA:RNEVFTW PhylomeDB:Q9FHX1
Genevestigator:Q9FHX1 Uniprot:Q9FHX1
Length = 1073
Score = 248 (92.4 bits), Expect = 9.4e-19, P = 9.4e-19
Identities = 73/243 (30%), Positives = 112/243 (46%)
Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
++ G +HT LI S +F+ G GVLGHG + T V + R + S + V+
Sbjct: 384 VSCGPWHTALITSTGQLFTFGDGTFGVLGHGDKET--VFYPREVESLSGLRTIAVACGVW 441
Query: 174 HAAFVLQ-----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
HAA +++ SG++FT GD GH D P +P V AL +V
Sbjct: 442 HAAAIVEVIVTHSSSSVSSGKLFTWGDGDKSRLGHGD-KEPRLKPTCVSALIDHTFHRVA 500
Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
G + T LT G V+T GS +GQLG+ + D P + V +IA G ++
Sbjct: 501 CGHSLTVGLTTSGKVYTMGSTVYGQLGNPNA-DGKLPCLVEDKLTKDCVEEIACGAYHVA 559
Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
+T V+++G G+N LGHG+ D P + + + HV ++ G A+
Sbjct: 560 VLTSRNEVFTWGKGANGRLGHGDVEDRKAPTLVDALKER--HVKNIACGSNFTAAICLHK 617
Query: 343 YVS 345
+VS
Sbjct: 618 WVS 620
Score = 236 (88.1 bits), Expect = 4.6e-17, P = 4.6e-17
Identities = 55/177 (31%), Positives = 90/177 (50%)
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
V ++ HAA V + G+VFT G+ S GH + + P+L+E+L V G
Sbjct: 274 VHHIACGVKHAALVSRQGEVFTWGEASGGRLGH-GMGKDVTGPQLIESLAATSIDFVACG 332
Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
T +T+ G ++T G TH G LGHG + PK I+ PLE + + ++ GP +
Sbjct: 333 EFHTCAVTMTGEIYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGL-QIASVSCGPWHT 391
Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
+T G +++FG G+ LGHG++ PR +++ G+ + V+ G H A+
Sbjct: 392 ALITSTGQLFTFGDGTFGVLGHGDKETVFYPREVESL--SGLRTIAVACGVWHAAAI 446
Score = 200 (75.5 bits), Expect = 8.6e-13, P = 8.6e-13
Identities = 66/244 (27%), Positives = 108/244 (44%)
Query: 116 ITTGRYHTLLIS-NSSVFSCGSSL--CGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
+ G +HT ++ +++ G G+LGHG + + + RI+ P + VS
Sbjct: 329 VACGEFHTCAVTMTGEIYTWGDGTHNAGLLGHGTDVSHWIP-KRISGPLEGLQIASVSCG 387
Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL-NFTGF 230
H A + +GQ+FT GD + GH D +F PR VE+L G+ V G+ +
Sbjct: 388 PWHTALITSTGQLFTFGDGTFGVLGHGD-KETVFYPREVESLSGLRTIAVACGVWHAAAI 446
Query: 231 LTI----------RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
+ + G + T G +LGHGD R P ++ L + + ++A G S
Sbjct: 447 VEVIVTHSSSSVSSGKLFTWGDGDKSRLGHGDKEPRLKPTCVSALID-HTFHRVACGHSL 505
Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
+ +T +G VY+ GS LG+ +L P ++ K V ++ G HV L S
Sbjct: 506 TVGLTTSGKVYTMGSTVYGQLGNPNADGKL-PCLVEDKLTKDC-VEEIACGAYHVAVLTS 563
Query: 341 SGYV 344
V
Sbjct: 564 RNEV 567
Score = 196 (74.1 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 68/251 (27%), Positives = 112/251 (44%)
Query: 116 ITTGRYHTLLISNSS-VFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQ 167
I G H L+S VF+ G + G LGHG P+ + ++ T I+F
Sbjct: 277 IACGVKHAALVSRQGEVFTWGEASGGRLGHGMGKDVTGPQLIESLAATSIDF-------- 328
Query: 168 VSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAG 224
V+ E H V +G+++T GD +++ GH T+ + P+ + L+G+ V+ G
Sbjct: 329 VACGEFHTCAVTMTGEIYTWGDGTHNAGLLGH-GTDVSHWIPKRISGPLEGLQIASVSCG 387
Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
T +T G + T G T G LGHGD P+ + L + ++ +A G + A+
Sbjct: 388 PWHTALITSTGQLFTFGDGTFGVLGHGDKETVFYPREVESLSGLRTIA-VACGVWHAAAI 446
Query: 285 T-----------GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
+G ++++G G LGHG++ L+P + H RV+ G
Sbjct: 447 VEVIVTHSSSSVSSGKLFTWGDGDKSRLGHGDKEPRLKPTCVSALIDHTFH--RVACGHS 504
Query: 334 HVVALDSSGYV 344
V L +SG V
Sbjct: 505 LTVGLTTSGKV 515
Score = 145 (56.1 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 40/149 (26%), Positives = 69/149 (46%)
Query: 196 GHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD 255
G+ + + P+ +E+ + + G+ ++ +G V T G + G+LGHG D
Sbjct: 252 GYLGSRSDVLIPKPLESNVVLDVHHIACGVKHAALVSRQGEVFTWGEASGGRLGHGMGKD 311
Query: 256 RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPR 313
P+ I L S+ +A G + AVT G +Y++G G++ LGHG P+
Sbjct: 312 VTGPQLIESLAAT-SIDFVACGEFHTCAVTMTGEIYTWGDGTHNAGLLGHGTDVSHWIPK 370
Query: 314 AIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
I +G+ + VS G H + S+G
Sbjct: 371 RISG-PLEGLQIASVSCGPWHTALITSTG 398
>UNIPROTKB|G3MX12 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0020037 "heme binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0046872 GO:GO:0008270
GO:GO:0020037 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.10.120.10 SUPFAM:SSF55856
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256
PROSITE:PS51284 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 InterPro:IPR006624 SMART:SM00706
EMBL:DAAA02003804 EMBL:DAAA02003805 Ensembl:ENSBTAT00000063010
Uniprot:G3MX12
Length = 4757
Score = 252 (93.8 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 83/302 (27%), Positives = 141/302 (46%)
Query: 50 PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
P + L +L +Q+ + +SRN ++ N + + +Q + S +IV+
Sbjct: 353 PIQCEGLANLGVTQIACAEKRFLILSRNGRV-YTQAYNSD-TLAPQLVQGLA-SRNIVKI 409
Query: 110 SAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG---P-ETTQCVS-FTRINFPSAAH 164
+A + G ++ L + V+S G G LGHG P E + +S F+ + H
Sbjct: 410 AAHS----DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFS--GKQAGKH 463
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
VV ++ ++A + G+++T G + GH + P LV LKG+ V G
Sbjct: 464 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACG 522
Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
L + G V + G +G+LG G + TPK I L+++ VV++ G + +
Sbjct: 523 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSV 581
Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
A+T +G VYS+G G N LGHG + P+ ++ + K V+ V+AG H +AL
Sbjct: 582 ALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGK--KVIDVAAGSTHCLALTEDS 639
Query: 343 YV 344
V
Sbjct: 640 EV 641
Score = 248 (92.4 bits), Expect = 5.6e-18, P = 5.6e-18
Identities = 77/250 (30%), Positives = 117/250 (46%)
Query: 97 LQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR 156
L+S++H ++ A N + G++ L S V+S G + G LGHG + C
Sbjct: 3954 LESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRV 4007
Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
I VV V+A H+A V +G ++T G GH D+ + +P+LVEAL+G
Sbjct: 4008 IESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGH 4066
Query: 217 PCKQVTAGLNF--TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 274
V G T LT V + G +G+LG G + P I L +G VV++
Sbjct: 4067 RVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKV 4125
Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 334
G + +A+T +G VY++G G LGHG +PR +Q + K V+ ++ G H
Sbjct: 4126 ECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGK--KVIAIATGSLH 4183
Query: 335 VVALDSSGYV 344
V G V
Sbjct: 4184 CVCCSEDGEV 4193
Score = 242 (90.2 bits), Expect = 4.2e-17, P = 4.2e-17
Identities = 73/228 (32%), Positives = 107/228 (46%)
Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
GR+ T L + VFS G G LGH C I + ++ +H+A +
Sbjct: 2977 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 3035
Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
SG+++T G GH D N +P++V+ L G QV G T LT G
Sbjct: 3036 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3094
Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
V + G G+LG G + P++I L G V QI G + LA+T +GVV+++G G
Sbjct: 3095 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3153
Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
F LGHG +P+ ++ R K I V V+ G H +A+ +G V
Sbjct: 3154 DYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCLAVTDAGQV 3199
Score = 228 (85.3 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 75/246 (30%), Positives = 121/246 (49%)
Query: 108 ET-SAGNM-QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH 164
ET SA N+ Q+ G ++ V++CG + G LG G ++ V R +++
Sbjct: 2908 ETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSSY 2966
Query: 165 VVQ---VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
VV+ V + HA + G+VF+ G+ GH + +PRL+EALK + +
Sbjct: 2967 VVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDI 3025
Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGP-- 278
G + + LT G ++T G +G+LGHGD + PK + L +G V+Q+A G
Sbjct: 3026 ACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRD 3083
Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
+ LA+T G+V+S+G G LG G P+ I+ +G V ++ G + +AL
Sbjct: 3084 AQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG--VCQIECGAQFSLAL 3141
Query: 339 DSSGYV 344
SG V
Sbjct: 3142 TKSGVV 3147
Score = 223 (83.6 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 69/224 (30%), Positives = 109/224 (48%)
Query: 127 SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV----VQVSASENHAAFVLQSG 182
++ +++ G G LG G T+ VS T S HV V V++ H + G
Sbjct: 3925 ADGKLYATGYGAGGRLGVGG--TESVS-TPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 3981
Query: 183 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
+V++ G+ GH + + P RPR++E+L+G V AG + +T G ++T G
Sbjct: 3982 EVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGK 4040
Query: 243 NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLAVTGNGVVYSFGSGSNFC 300
+G+LGH D+ D+ PK + L+ VV +A +G + L +T + V+S+G G
Sbjct: 4041 GRYGRLGHSDSEDQLKPKLVEALQG-HRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGK 4099
Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
LG G P I + G+ VV+V G + VAL SG V
Sbjct: 4100 LGRGGSDGCKVPMKIDSLT--GLGVVKVECGSQFSVALTKSGAV 4141
Score = 198 (74.8 bits), Expect = 8.2e-12, P = 8.2e-12
Identities = 66/225 (29%), Positives = 99/225 (44%)
Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
I G H+ L S+ +++ G G LGHG TTQ + + V+QV+
Sbjct: 3025 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3083
Query: 175 AAFVL--QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
A + G VF+ GD G R + P+ +E L G Q+ G F+ LT
Sbjct: 3084 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3142
Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
G V T G + +LGHG + P+ + L +V +A G + LAVT G VY+
Sbjct: 3143 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGK-KIVHVAVGALHCLAVTDAGQVYA 3201
Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
+G + G+G +P +Q +G + RV+ G H VA
Sbjct: 3202 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3244
Score = 169 (64.5 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 53/184 (28%), Positives = 89/184 (48%)
Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
++ +++ A+ +A +++ +VF G N G ++ I P E L + Q
Sbjct: 2860 NSGSLIRKKAAGLESAATIRT-KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQ 2917
Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEE-VGSVVQIAAGP 278
V G +T+ G V+ CG T+G+LG G + P P+ I L V V + +G
Sbjct: 2918 VAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGG 2977
Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
+ A+T +G V+S+G G + LGH + + +PR I+ + K I ++ G H AL
Sbjct: 2978 RHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAAL 3035
Query: 339 DSSG 342
SSG
Sbjct: 3036 TSSG 3039
Score = 165 (63.1 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 58/224 (25%), Positives = 100/224 (44%)
Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF--V 178
Y + + +++ G G LGHG + + V+ V+ A V
Sbjct: 473 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAV 531
Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
++GQV++ GD G R + P+L+E L+ + +V G F+ LT G V+
Sbjct: 532 TENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVY 590
Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
+ G + +LGHG PK + L+ V+ +AAG ++ LA+T + V+S+GS
Sbjct: 591 SWGKGDNQRLGHGTEEHVRYPKLLEGLQGK-KVIDVAAGSTHCLALTEDSEVHSWGSNDQ 649
Query: 299 FCLGHGE--QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
C H + + + +P A+ K H+V ++ G A S
Sbjct: 650 -CQ-HFDTLRVTKPEPSALPGLDTK--HIVGIACGPAQSFAWSS 689
Score = 162 (62.1 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 59/249 (23%), Positives = 109/249 (43%)
Query: 95 RFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSF 154
R ++S+ +++V+ +AG G + + + +++ G G LGH Q +
Sbjct: 4006 RVIESLR-GTEVVDVAAG------GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQ-LKP 4057
Query: 155 TRINFPSAAHVVQVSASENHAAFVLQSGQ--VFTCGDNSSFCCGHRDTNRPIFRPRLVEA 212
+ VV V+ A + + V++ GD G R + P +++
Sbjct: 4058 KLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLG-RGGSDGCKVPMKIDS 4116
Query: 213 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
L G+ +V G F+ LT G V+T G + +LGHG P+ + L+ V+
Sbjct: 4117 LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGK-KVI 4175
Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
IA G + + + +G VY++G LG G + +PR + + K ++ RV+ G
Sbjct: 4176 AIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVN--RVACGS 4233
Query: 333 EHVVALDSS 341
H +A +S
Sbjct: 4234 AHTLAWSTS 4242
Score = 150 (57.9 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 47/163 (28%), Positives = 76/163 (46%)
Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
SG ++ G N G + + + P EAL + Q+ G +T G ++
Sbjct: 3874 SGTIYGWGHNHRGQLGGIEGAK-VKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYAT 3932
Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
G G+LG G T TP + ++ V V + +G + LA++ G VYS+G +
Sbjct: 3933 GYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 3992
Query: 300 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
LGHG + +PR I++ R G VV V+AG H + ++G
Sbjct: 3993 KLGHGNRSPCDRPRVIESLR--GTEVVDVAAGGAHSACVTAAG 4033
Score = 149 (57.5 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 48/164 (29%), Positives = 74/164 (45%)
Query: 123 TLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQS 181
TL +++ VFS G G LG G + C I + V Q+ + + +S
Sbjct: 3086 TLALTDEGLVFSWGDGDFGKLGRGG-SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKS 3144
Query: 182 GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 241
G V+T G F GH ++ + +P++VE L+G V G +T G V+ G
Sbjct: 3145 GVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWG 3203
Query: 242 SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
N HGQ G+G T P + LE + ++A G S+ +A T
Sbjct: 3204 DNDHGQQGNGTTTVNRKPTLVQGLEGQ-KITRVACGSSHSVAWT 3246
Score = 147 (56.8 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 52/169 (30%), Positives = 76/169 (44%)
Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
+G TL ++ N V+S G G LG G + C + I VV+V +
Sbjct: 523 SGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDGCKTPKLIEKLQDLDVVKVRCGSQFSV 581
Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
+ + GQV++ G + GH T + P+L+E L+G V AG LT
Sbjct: 582 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 640
Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
VH+ GSN Q H DTL +P P ++ L+ +V IA GP+ A
Sbjct: 641 VHSWGSNDQCQ--HFDTLRVTKPEPSALPGLD-TKHIVGIACGPAQSFA 686
Score = 129 (50.5 bits), Expect = 0.00038, P = 0.00038
Identities = 37/113 (32%), Positives = 57/113 (50%)
Query: 235 GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
G ++ G N GQLG G + PTP +++A L V Q+ G + AVT +G +Y
Sbjct: 3875 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPV----QLIGGEQTLFAVTADGKLY 3930
Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
+ G G+ LG G P +++ + I V V++G +H +AL S G V
Sbjct: 3931 ATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 3983
Score = 41 (19.5 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 13/63 (20%), Positives = 27/63 (42%)
Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
+ L+ G+G +Y +G LG E P + + V++ G++ + A+
Sbjct: 3867 WTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALA--ALRPVQLIGGEQTLFAVT 3924
Query: 340 SSG 342
+ G
Sbjct: 3925 ADG 3927
>UNIPROTKB|E1B782 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0032183 "SUMO binding" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0020037 "heme
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005743
GO:GO:0046872 GO:GO:0008270 GO:GO:0006281 GO:GO:0007283
GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
Gene3D:2.30.30.30 InterPro:IPR021097 InterPro:IPR014722
Pfam:PF11515 SUPFAM:SSF56204 GeneTree:ENSGT00700000104208
OMA:QLAFTRD InterPro:IPR006624 SMART:SM00706 EMBL:DAAA02003804
EMBL:DAAA02003805 IPI:IPI00713038 Ensembl:ENSBTAT00000018496
Uniprot:E1B782
Length = 4847
Score = 252 (93.8 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 83/302 (27%), Positives = 141/302 (46%)
Query: 50 PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
P + L +L +Q+ + +SRN ++ N + + +Q + S +IV+
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRV-YTQAYNSD-TLAPQLVQGLA-SRNIVKI 499
Query: 110 SAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG---P-ETTQCVS-FTRINFPSAAH 164
+A + G ++ L + V+S G G LGHG P E + +S F+ + H
Sbjct: 500 AAHS----DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFS--GKQAGKH 553
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
VV ++ ++A + G+++T G + GH + P LV LKG+ V G
Sbjct: 554 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACG 612
Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
L + G V + G +G+LG G + TPK I L+++ VV++ G + +
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSV 671
Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
A+T +G VYS+G G N LGHG + P+ ++ + K V+ V+AG H +AL
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGK--KVIDVAAGSTHCLALTEDS 729
Query: 343 YV 344
V
Sbjct: 730 EV 731
Score = 248 (92.4 bits), Expect = 5.8e-18, P = 5.8e-18
Identities = 77/250 (30%), Positives = 117/250 (46%)
Query: 97 LQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR 156
L+S++H ++ A N + G++ L S V+S G + G LGHG + C
Sbjct: 4044 LESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRV 4097
Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
I VV V+A H+A V +G ++T G GH D+ + +P+LVEAL+G
Sbjct: 4098 IESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGH 4156
Query: 217 PCKQVTAGLNF--TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 274
V G T LT V + G +G+LG G + P I L +G VV++
Sbjct: 4157 RVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKV 4215
Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 334
G + +A+T +G VY++G G LGHG +PR +Q + K V+ ++ G H
Sbjct: 4216 ECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGK--KVIAIATGSLH 4273
Query: 335 VVALDSSGYV 344
V G V
Sbjct: 4274 CVCCSEDGEV 4283
Score = 242 (90.2 bits), Expect = 4.3e-17, P = 4.3e-17
Identities = 73/228 (32%), Positives = 107/228 (46%)
Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
GR+ T L + VFS G G LGH C I + ++ +H+A +
Sbjct: 3067 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 3125
Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
SG+++T G GH D N +P++V+ L G QV G T LT G
Sbjct: 3126 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3184
Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
V + G G+LG G + P++I L G V QI G + LA+T +GVV+++G G
Sbjct: 3185 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3243
Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
F LGHG +P+ ++ R K I V V+ G H +A+ +G V
Sbjct: 3244 DYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCLAVTDAGQV 3289
Score = 228 (85.3 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 75/246 (30%), Positives = 121/246 (49%)
Query: 108 ET-SAGNM-QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH 164
ET SA N+ Q+ G ++ V++CG + G LG G ++ V R +++
Sbjct: 2998 ETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSSY 3056
Query: 165 VVQ---VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
VV+ V + HA + G+VF+ G+ GH + +PRL+EALK + +
Sbjct: 3057 VVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDI 3115
Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGP-- 278
G + + LT G ++T G +G+LGHGD + PK + L +G V+Q+A G
Sbjct: 3116 ACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRD 3173
Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
+ LA+T G+V+S+G G LG G P+ I+ +G V ++ G + +AL
Sbjct: 3174 AQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG--VCQIECGAQFSLAL 3231
Query: 339 DSSGYV 344
SG V
Sbjct: 3232 TKSGVV 3237
Score = 223 (83.6 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 69/224 (30%), Positives = 109/224 (48%)
Query: 127 SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV----VQVSASENHAAFVLQSG 182
++ +++ G G LG G T+ VS T S HV V V++ H + G
Sbjct: 4015 ADGKLYATGYGAGGRLGVGG--TESVS-TPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4071
Query: 183 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
+V++ G+ GH + + P RPR++E+L+G V AG + +T G ++T G
Sbjct: 4072 EVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGK 4130
Query: 243 NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLAVTGNGVVYSFGSGSNFC 300
+G+LGH D+ D+ PK + L+ VV +A +G + L +T + V+S+G G
Sbjct: 4131 GRYGRLGHSDSEDQLKPKLVEALQG-HRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGK 4189
Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
LG G P I + G+ VV+V G + VAL SG V
Sbjct: 4190 LGRGGSDGCKVPMKIDSLT--GLGVVKVECGSQFSVALTKSGAV 4231
Score = 198 (74.8 bits), Expect = 8.3e-12, P = 8.3e-12
Identities = 66/225 (29%), Positives = 99/225 (44%)
Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
I G H+ L S+ +++ G G LGHG TTQ + + V+QV+
Sbjct: 3115 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3173
Query: 175 AAFVL--QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
A + G VF+ GD G R + P+ +E L G Q+ G F+ LT
Sbjct: 3174 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3232
Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
G V T G + +LGHG + P+ + L +V +A G + LAVT G VY+
Sbjct: 3233 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGK-KIVHVAVGALHCLAVTDAGQVYA 3291
Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
+G + G+G +P +Q +G + RV+ G H VA
Sbjct: 3292 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3334
Score = 169 (64.5 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 53/184 (28%), Positives = 89/184 (48%)
Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
++ +++ A+ +A +++ +VF G N G ++ I P E L + Q
Sbjct: 2950 NSGSLIRKKAAGLESAATIRT-KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQ 3007
Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEE-VGSVVQIAAGP 278
V G +T+ G V+ CG T+G+LG G + P P+ I L V V + +G
Sbjct: 3008 VAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGG 3067
Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
+ A+T +G V+S+G G + LGH + + +PR I+ + K I ++ G H AL
Sbjct: 3068 RHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAAL 3125
Query: 339 DSSG 342
SSG
Sbjct: 3126 TSSG 3129
Score = 165 (63.1 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 58/224 (25%), Positives = 100/224 (44%)
Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF--V 178
Y + + +++ G G LGHG + + V+ V+ A V
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAV 621
Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
++GQV++ GD G R + P+L+E L+ + +V G F+ LT G V+
Sbjct: 622 TENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVY 680
Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
+ G + +LGHG PK + L+ V+ +AAG ++ LA+T + V+S+GS
Sbjct: 681 SWGKGDNQRLGHGTEEHVRYPKLLEGLQGK-KVIDVAAGSTHCLALTEDSEVHSWGSNDQ 739
Query: 299 FCLGHGE--QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
C H + + + +P A+ K H+V ++ G A S
Sbjct: 740 -CQ-HFDTLRVTKPEPSALPGLDTK--HIVGIACGPAQSFAWSS 779
Score = 162 (62.1 bits), Expect = 8.9e-08, P = 8.9e-08
Identities = 59/249 (23%), Positives = 109/249 (43%)
Query: 95 RFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSF 154
R ++S+ +++V+ +AG G + + + +++ G G LGH Q +
Sbjct: 4096 RVIESLR-GTEVVDVAAG------GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQ-LKP 4147
Query: 155 TRINFPSAAHVVQVSASENHAAFVLQSGQ--VFTCGDNSSFCCGHRDTNRPIFRPRLVEA 212
+ VV V+ A + + V++ GD G R + P +++
Sbjct: 4148 KLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLG-RGGSDGCKVPMKIDS 4206
Query: 213 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
L G+ +V G F+ LT G V+T G + +LGHG P+ + L+ V+
Sbjct: 4207 LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGK-KVI 4265
Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
IA G + + + +G VY++G LG G + +PR + + K ++ RV+ G
Sbjct: 4266 AIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVN--RVACGS 4323
Query: 333 EHVVALDSS 341
H +A +S
Sbjct: 4324 AHTLAWSTS 4332
Score = 150 (57.9 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 47/163 (28%), Positives = 76/163 (46%)
Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
SG ++ G N G + + + P EAL + Q+ G +T G ++
Sbjct: 3964 SGTIYGWGHNHRGQLGGIEGAK-VKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYAT 4022
Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
G G+LG G T TP + ++ V V + +G + LA++ G VYS+G +
Sbjct: 4023 GYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4082
Query: 300 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
LGHG + +PR I++ R G VV V+AG H + ++G
Sbjct: 4083 KLGHGNRSPCDRPRVIESLR--GTEVVDVAAGGAHSACVTAAG 4123
Score = 149 (57.5 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 48/164 (29%), Positives = 74/164 (45%)
Query: 123 TLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQS 181
TL +++ VFS G G LG G + C I + V Q+ + + +S
Sbjct: 3176 TLALTDEGLVFSWGDGDFGKLGRGG-SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKS 3234
Query: 182 GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 241
G V+T G F GH ++ + +P++VE L+G V G +T G V+ G
Sbjct: 3235 GVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWG 3293
Query: 242 SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
N HGQ G+G T P + LE + ++A G S+ +A T
Sbjct: 3294 DNDHGQQGNGTTTVNRKPTLVQGLEGQ-KITRVACGSSHSVAWT 3336
Score = 147 (56.8 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 52/169 (30%), Positives = 76/169 (44%)
Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
+G TL ++ N V+S G G LG G + C + I VV+V +
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDGCKTPKLIEKLQDLDVVKVRCGSQFSV 671
Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
+ + GQV++ G + GH T + P+L+E L+G V AG LT
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730
Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
VH+ GSN Q H DTL +P P ++ L+ +V IA GP+ A
Sbjct: 731 VHSWGSNDQCQ--HFDTLRVTKPEPSALPGLD-TKHIVGIACGPAQSFA 776
Score = 129 (50.5 bits), Expect = 0.00038, P = 0.00038
Identities = 37/113 (32%), Positives = 57/113 (50%)
Query: 235 GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
G ++ G N GQLG G + PTP +++A L V Q+ G + AVT +G +Y
Sbjct: 3965 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPV----QLIGGEQTLFAVTADGKLY 4020
Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
+ G G+ LG G P +++ + I V V++G +H +AL S G V
Sbjct: 4021 ATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4073
Score = 41 (19.5 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 13/63 (20%), Positives = 27/63 (42%)
Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
+ L+ G+G +Y +G LG E P + + V++ G++ + A+
Sbjct: 3957 WTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALA--ALRPVQLIGGEQTLFAVT 4014
Query: 340 SSG 342
+ G
Sbjct: 4015 ADG 4017
>ZFIN|ZDB-GENE-090313-139 [details] [associations]
symbol:herc3 "hect domain and RLD 3" species:7955
"Danio rerio" [GO:0006464 "cellular protein modification process"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-090313-139
GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00660000095216 CTD:8916 HOGENOM:HOG000208452
HOVERGEN:HBG050878 OMA:SPAVDFR OrthoDB:EOG4RBQHS EMBL:CU467858
IPI:IPI00901161 RefSeq:NP_001139096.1 UniGene:Dr.86009
Ensembl:ENSDART00000112994 Ensembl:ENSDART00000141977
GeneID:100003587 NextBio:20785898 Uniprot:B8JLD4
Length = 1046
Score = 247 (92.0 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 70/232 (30%), Positives = 113/232 (48%)
Query: 116 ITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH-VVQVSASEN 173
++ G+ H+L ++ VF+ G+ G LG G + V R+ H + QV +
Sbjct: 89 VSCGQAHSLAVNEQGQVFAWGAGDGGQLGLGT-AEEAVRVPRLIKKLCEHRISQVMCGNH 147
Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
H + + GQ+F G+NSS G P+ +++L G+P Q++AG + + L+
Sbjct: 148 HCIALSKDGQLFVWGENSSGQLGLGKGEPSTLSPQPLKSLCGIPLTQISAGGDHSFALSF 207
Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
G V G N+ GQLG D DR P I L VV I+ G + A+T G +++F
Sbjct: 208 SGAVFGWGKNSAGQLGLNDEQDRAVPCHIKFLRSQ-KVVYISCGEEHTAALTKEGGLFTF 266
Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYV 344
G+GS LGH +E PR + G V +++ G H +A + S+G +
Sbjct: 267 GNGSKGQLGHDSTRNEPLPRRVMELM--GTEVSQIACGRNHTLAFVPSTGLI 316
Score = 237 (88.5 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 75/247 (30%), Positives = 112/247 (45%)
Query: 101 EHSSDIVETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGH--GPETTQCVSFTRI 157
E S V G ++ G H+L L+ + SV++CGS+ CG LGH G + V
Sbjct: 24 EPRSCCVFDGRGLKEVACGNQHSLFLLHDGSVYTCGSNSCGQLGHDKGGSRPELVGAL-- 81
Query: 158 NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVP 217
A + VS + H+ V + GQVF G G + PRL++ L
Sbjct: 82 ---DAQKISGVSCGQAHSLAVNEQGQVFAWGAGDGGQLGLGTAEEAVRVPRLIKKLCEHR 138
Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV--VQIA 275
QV G + L+ G + G N+ GQLG G P+ S PL+ + + QI+
Sbjct: 139 ISQVMCGNHHCIALSKDGQLFVWGENSSGQLGLGK--GEPSTLSPQPLKSLCGIPLTQIS 196
Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
AG + A++ +G V+ +G S LG ++ D P I+ R + VV +S G+EH
Sbjct: 197 AGGDHSFALSFSGAVFGWGKNSAGQLGLNDEQDRAVPCHIKFLRSQ--KVVYISCGEEHT 254
Query: 336 VALDSSG 342
AL G
Sbjct: 255 AALTKEG 261
Score = 199 (75.1 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 59/194 (30%), Positives = 96/194 (49%)
Query: 115 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
Q+ G +H + +S + +F G + G LG G +S + + Q+SA +
Sbjct: 141 QVMCGNHHCIALSKDGQLFVWGENSSGQLGLGKGEPSTLSPQPLKSLCGIPLTQISAGGD 200
Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
H+ + SG VF G NS+ G D +R + P ++ L+ ++ G T LT
Sbjct: 201 HSFALSFSGAVFGWGKNSAGQLGLNDEQDRAV--PCHIKFLRSQKVVYISCGEEHTAALT 258
Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
G + T G+ + GQLGH T + P P+ + +E +G+ V QIA G ++ LA V G++
Sbjct: 259 KEGGLFTFGNGSKGQLGHDSTRNEPLPRRV--MELMGTEVSQIACGRNHTLAFVPSTGLI 316
Query: 291 YSFGSGSNFCLGHG 304
Y+FG + LG G
Sbjct: 317 YAFGCNTQGQLGTG 330
Score = 191 (72.3 bits), Expect = 8.9e-12, P = 8.9e-12
Identities = 57/157 (36%), Positives = 75/157 (47%)
Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
QI+ G H+ +S S +VF G + G LG E + V I F + VV +S E
Sbjct: 194 QISAGGDHSFALSFSGAVFGWGKNSAGQLGLNDEQDRAVP-CHIKFLRSQKVVYISCGEE 252
Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFT-GFL 231
H A + + G +FT G+ S GH T N P+ PR V L G Q+ G N T F+
Sbjct: 253 HTAALTKEGGLFTFGNGSKGQLGHDSTRNEPL--PRRVMELMGTEVSQIACGRNHTLAFV 310
Query: 232 TIRGHVHTCGSNTHGQLGHG--DTLDRPTPKS-IAPL 265
G ++ G NT GQLG G + P P S I PL
Sbjct: 311 PSTGLIYAFGCNTQGQLGTGIRGSAKSPVPVSNIQPL 347
Score = 165 (63.1 bits), Expect = 7.4e-09, P = 7.4e-09
Identities = 45/140 (32%), Positives = 67/140 (47%)
Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
+F PR G K+V G + FL G V+TCGSN+ GQLGH RP
Sbjct: 22 VFEPRSCCVFDGRGLKEVACGNQHSLFLLHDGSVYTCGSNSCGQLGHDKGGSRPELVGAL 81
Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKG 322
+++ V + G ++ LAV G V+++G+G LG G + ++ PR I+
Sbjct: 82 DAQKISGV---SCGQAHSLAVNEQGQVFAWGAGDGGQLGLGTAEEAVRVPRLIKKLCEHR 138
Query: 323 IHVVRVSAGDEHVVALDSSG 342
I +V G+ H +AL G
Sbjct: 139 IS--QVMCGNHHCIALSKDG 156
>UNIPROTKB|A2VDP7 [details] [associations]
symbol:HERC3 "HERC3 protein" species:9913 "Bos taurus"
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 GeneTree:ENSGT00660000095216 CTD:8916
HOGENOM:HOG000208452 HOVERGEN:HBG050878 KO:K10614 OMA:SPAVDFR
OrthoDB:EOG4RBQHS EMBL:DAAA02017014 EMBL:BC133341 IPI:IPI00710875
RefSeq:NP_001077132.1 UniGene:Bt.85959 Ensembl:ENSBTAT00000013357
GeneID:510924 KEGG:bta:510924 InParanoid:A2VDP7 NextBio:20869685
Uniprot:A2VDP7
Length = 1050
Score = 246 (91.7 bits), Expect = 1.9e-18, P = 1.9e-18
Identities = 74/234 (31%), Positives = 112/234 (47%)
Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
+ + G H+L +S+ +FS G+ G LG V+ R I + ++QVS
Sbjct: 87 VHVACGESHSLALSDQGQLFSWGAGSDGQLGL-MTIEDSVAVPRLIQKLNQQTILQVSCG 145
Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
H + GQ FT G NS G P+ V +L+G+P QV AG + L
Sbjct: 146 NWHCLALAADGQFFTWGRNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVVAGGAHSFAL 205
Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
++ G V G N GQLG D DR +P + L VV I+ G + +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264
Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYV 344
+FG+GS LGH +DE+ PR + G V +++ G +H +A + SSG +
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLI 316
Score = 239 (89.2 bits), Expect = 1.8e-17, P = 1.8e-17
Identities = 65/227 (28%), Positives = 108/227 (47%)
Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
G + L+ + V++CG + G LGH E + +I + H+V V+ E+H+ +
Sbjct: 43 GNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKP---EQIGALADQHIVHVACGESHSLAL 99
Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
GQ+F+ G S G + PRL++ L QV+ G L G
Sbjct: 100 SDQGQLFSWGAGSDGQLGLMTIEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159
Query: 239 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
T G N+HGQLG G + +P+ + LE + + Q+ AG ++ A++ +G V+ +G +
Sbjct: 160 TWGRNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVVAGGAHSFALSLSGAVFGWGMNN 218
Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
LG ++ D P ++ R + VV +S G+EH L SG V
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGV 263
Score = 204 (76.9 bits), Expect = 2.9e-13, P = 2.9e-13
Identities = 71/234 (30%), Positives = 106/234 (45%)
Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
+Q++ G +H L L ++ F+ G + G LG G E S R+ + QV A
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGRNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVVAGG 199
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
H+ + SG VF G N++ G D + P V+ L+ ++ G T LT
Sbjct: 200 AHSFALSLSGAVFGWGMNNAGQLGLSD-EKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGNGVV 290
G V T G+ + GQLGH D P+ + LE +GS V QIA G + LA V +G++
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLI 316
Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTF--RRKGIHVVRVSAGDEHVVALDSSG 342
Y+FG G+ LG G + P ++ + G R H+V SG
Sbjct: 317 YAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSG 370
Score = 196 (74.1 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 60/209 (28%), Positives = 106/209 (50%)
Query: 140 GVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH- 197
G G P V+ ++ F S V +V+ NH+ F+L+ G+V+TCG N+ GH
Sbjct: 10 GQPGISPNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHE 69
Query: 198 RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR- 256
R+ N+P + AL V G + + L+ +G + + G+ + GQLG D
Sbjct: 70 REGNKP----EQIGALADQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTIEDSV 125
Query: 257 PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAI 315
P+ I L + +++Q++ G + LA+ +G +++G S+ LG G++ + P+ +
Sbjct: 126 AVPRLIQKLNQQ-TILQVSCGNWHCLALAADGQFFTWGRNSHGQLGLGKEFPSQASPQRV 184
Query: 316 QTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
++ +GI + +V AG H AL SG V
Sbjct: 185 RSL--EGIPLAQVVAGGAHSFALSLSGAV 211
>UNIPROTKB|D4ACN3 [details] [associations]
symbol:Herc2 "Protein Herc2" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
RGD:1307989 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005743 GO:GO:0046872 GO:GO:0008270 GO:GO:0006281
GO:GO:0007283 GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.10.120.10 SUPFAM:SSF55856
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256
PROSITE:PS51284 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 OrthoDB:EOG41C6V9 InterPro:IPR006624
SMART:SM00706 IPI:IPI00764717 Ensembl:ENSRNOT00000019245
ArrayExpress:D4ACN3 Uniprot:D4ACN3
Length = 4779
Score = 248 (92.4 bits), Expect = 5.7e-18, P = 5.7e-18
Identities = 82/302 (27%), Positives = 139/302 (46%)
Query: 50 PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
P + L L Q+ + +SRN ++ N + + +Q + S +IV+
Sbjct: 388 PIQCEGLASLGVMQVACAEKRFLILSRNGRV-YTQAYNSDMLAP-QLVQGLA-SRNIVKI 444
Query: 110 SAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG---P-ETTQCVS-FTRINFPSAAH 164
+A + G ++ L + V+S G G LGHG P E + +S F+ + H
Sbjct: 445 AAHS----DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFS--GKQAGKH 498
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
VV ++ ++A + G+++T G + GH + P LV LKG+ V G
Sbjct: 499 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACG 557
Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
L + G V + G +G+LG G + TPK I L+++ V+++ G + +
Sbjct: 558 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVIKVRCGSQFSI 616
Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
A+T +G VYS+G G N LGHG + P+ ++ + K V+ V+AG H +AL
Sbjct: 617 ALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGK--KVIDVAAGSTHCLALTEDS 674
Query: 343 YV 344
V
Sbjct: 675 EV 676
Score = 245 (91.3 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
Identities = 74/228 (32%), Positives = 107/228 (46%)
Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
GR+ T L + VFS G G LGH C I + ++ +H+A +
Sbjct: 3000 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 3058
Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
SG+++T G GH D N +P++V+ L G QV G T LT G
Sbjct: 3059 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3117
Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
V + G G+LG G + P++I L G V QI G + LA+T +GVV+++G G
Sbjct: 3118 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3176
Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
F LGHG +P+ ++ R K I V V+ G H +A+ SG V
Sbjct: 3177 DYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCLAVTDSGQV 3222
Score = 244 (91.0 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
Identities = 76/250 (30%), Positives = 117/250 (46%)
Query: 97 LQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR 156
L+S++H ++ A N + G++ L S V+S G + G LGHG + C
Sbjct: 3976 LESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRV 4029
Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
I VV V+A H+A V +G ++T G GH D+ + +P+LVEAL+G
Sbjct: 4030 IESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGH 4088
Query: 217 PCKQVTAGLNF--TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 274
+ G T LT V + G +G+LG G + P I L +G VV++
Sbjct: 4089 RVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKV 4147
Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 334
G + +A+T +G VY++G G LGHG +PR +Q + K V+ ++ G H
Sbjct: 4148 ECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGK--KVIAIATGSLH 4205
Query: 335 VVALDSSGYV 344
V G V
Sbjct: 4206 CVCCTEDGEV 4215
Score = 232 (86.7 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 76/246 (30%), Positives = 121/246 (49%)
Query: 108 ET-SAGNM-QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH 164
ET SA N+ Q+ G ++ V+SCG + G LG G ++ V R +++
Sbjct: 2931 ETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGM-SSGTVPIPRQITALSSY 2989
Query: 165 VVQ---VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
VV+ V + HA + G+VF+ G+ GH + +PRL+EALK + +
Sbjct: 2990 VVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDI 3048
Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGP-- 278
G + + LT G ++T G +G+LGHGD + PK + L +G V+Q+A G
Sbjct: 3049 ACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRD 3106
Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
+ LA+T G+V+S+G G LG G P+ I+ +G V ++ G + +AL
Sbjct: 3107 AQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG--VCQIECGAQFSLAL 3164
Query: 339 DSSGYV 344
SG V
Sbjct: 3165 TKSGVV 3170
Score = 226 (84.6 bits), Expect = 7.2e-14, Sum P(2) = 7.2e-14
Identities = 69/224 (30%), Positives = 110/224 (49%)
Query: 127 SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV----VQVSASENHAAFVLQSG 182
++ +++ G G LG G T+ VS T S HV V V++ H + G
Sbjct: 3947 ADGKLYATGYGAGGRLGIGG--TESVS-TPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4003
Query: 183 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
+V++ G+ GH + + P RPR++E+L+G+ V AG + +T G ++T G
Sbjct: 4004 EVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGK 4062
Query: 243 NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLAVTGNGVVYSFGSGSNFC 300
+G+LGH D+ D+ PK + L+ V+ IA +G + L +T + V+S+G G
Sbjct: 4063 GRYGRLGHSDSEDQLKPKLVEALQG-HRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 4121
Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
LG G P I + G+ VV+V G + VAL SG V
Sbjct: 4122 LGRGGSDGCKVPMKIDSLT--GLGVVKVECGSQFSVALTKSGAV 4163
Score = 201 (75.8 bits), Expect = 9.2e-11, Sum P(2) = 9.2e-11
Identities = 66/225 (29%), Positives = 100/225 (44%)
Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
I G H+ L S+ +++ G G LGHG TTQ + + V+QV+
Sbjct: 3048 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3106
Query: 175 AAFVL--QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
A + G VF+ GD G R + P+ +E L G Q+ G F+ LT
Sbjct: 3107 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3165
Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
G V T G + +LGHG + P+ + L +V +A G + LAVT +G VY+
Sbjct: 3166 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGK-KIVHVAVGALHCLAVTDSGQVYA 3224
Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
+G + G+G +P +Q +G + RV+ G H VA
Sbjct: 3225 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3267
Score = 168 (64.2 bits), Expect = 5.9e-07, Sum P(2) = 5.9e-07
Identities = 51/162 (31%), Positives = 78/162 (48%)
Query: 183 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
+VF G N G ++ I P E L + QV G +T+ G V++CG
Sbjct: 2904 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGE 2962
Query: 243 NTHGQLGHGDTLDR-PTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
T+G+LG G + P P+ I L V V + +G + A+T +G V+S+G G +
Sbjct: 2963 ATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3022
Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
LGH + + +PR I+ + K I ++ G H AL SSG
Sbjct: 3023 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSG 3062
Score = 166 (63.5 bits), Expect = 9.7e-07, Sum P(2) = 9.7e-07
Identities = 62/260 (23%), Positives = 112/260 (43%)
Query: 84 NRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLG 143
NR + RV+ L+ +E +V+ +AG G + + + +++ G G LG
Sbjct: 4020 NRSPCDRPRVIESLRGIE----VVDVAAG------GAHSACVTAAGDLYTWGKGRYGRLG 4069
Query: 144 HGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ--VFTCGDNSSFCCGHRDTN 201
H Q + + V+ ++ A + + V++ GD G R +
Sbjct: 4070 HSDSEDQ-LKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG-RGGS 4127
Query: 202 RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 261
P +++L G+ +V G F+ LT G V+T G + +LGHG P+
Sbjct: 4128 DGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQ 4187
Query: 262 IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 321
+ L+ V+ IA G + + T +G VY++G LG G + +PR + + K
Sbjct: 4188 VQGLQGK-KVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGK 4246
Query: 322 GIHVVRVSAGDEHVVALDSS 341
++ RV+ G H +A +S
Sbjct: 4247 KVN--RVACGSAHTLAWSTS 4264
Score = 163 (62.4 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 58/224 (25%), Positives = 100/224 (44%)
Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF--V 178
Y + + +++ G G LGHG + + V+ V+ A V
Sbjct: 508 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAV 566
Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
++GQV++ GD G R + P+L+E L+ + +V G F+ LT G V+
Sbjct: 567 TENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVY 625
Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
+ G + +LGHG PK + L+ V+ +AAG ++ LA+T + V+S+GS
Sbjct: 626 SWGKGDNQRLGHGTEEHVRYPKLLEGLQGK-KVIDVAAGSTHCLALTEDSEVHSWGSNDQ 684
Query: 299 FCLGHGE--QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
C H + + + +P A+ K H+V ++ G A S
Sbjct: 685 -CQ-HFDTLRVTKPEPTALPGLDTK--HIVGIACGPAQSFAWSS 724
Score = 153 (58.9 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 48/163 (29%), Positives = 77/163 (47%)
Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
SG ++ G N G + + + P EAL + Q+ G +T G ++
Sbjct: 3896 SGTIYGWGHNHRGQLGGIEGAK-VKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 3954
Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
G G+LG G T TP + ++ V V + +G + LA++ G VYS+G +
Sbjct: 3955 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4014
Query: 300 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
LGHG + +PR I++ R GI VV V+AG H + ++G
Sbjct: 4015 KLGHGNRSPCDRPRVIESLR--GIEVVDVAAGGAHSACVTAAG 4055
Score = 149 (57.5 bits), Expect = 0.00028, Sum P(3) = 0.00028
Identities = 48/164 (29%), Positives = 74/164 (45%)
Query: 123 TLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQS 181
TL +++ VFS G G LG G + C I + V Q+ + + +S
Sbjct: 3109 TLALTDEGLVFSWGDGDFGKLGRGG-SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKS 3167
Query: 182 GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 241
G V+T G F GH ++ + +P++VE L+G V G +T G V+ G
Sbjct: 3168 GVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWG 3226
Query: 242 SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
N HGQ G+G T P + LE + ++A G S+ +A T
Sbjct: 3227 DNDHGQQGNGTTTVNRKPTLVQGLEGQ-KITRVACGSSHSVAWT 3269
Score = 144 (55.7 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 51/169 (30%), Positives = 76/169 (44%)
Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
+G TL ++ N V+S G G LG G + C + I V++V +
Sbjct: 558 SGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDGCKTPKLIEKLQDLDVIKVRCGSQFSI 616
Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
+ + GQV++ G + GH T + P+L+E L+G V AG LT
Sbjct: 617 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 675
Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
VH+ GSN Q H DTL +P P ++ L+ +V IA GP+ A
Sbjct: 676 VHSWGSNDQCQ--HFDTLRVTKPEPTALPGLD-TKHIVGIACGPAQSFA 721
Score = 40 (19.1 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 13/63 (20%), Positives = 27/63 (42%)
Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
+ L+ G+G +Y +G LG E P + + V++ G++ + A+
Sbjct: 3889 WTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAT--LRPVQLIGGEQTLFAVT 3946
Query: 340 SSG 342
+ G
Sbjct: 3947 ADG 3949
Score = 37 (18.1 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
Identities = 7/12 (58%), Positives = 9/12 (75%)
Query: 62 SQLCALHSIYAG 73
SQLC++ YAG
Sbjct: 2113 SQLCSVTQSYAG 2124
>MGI|MGI:103234 [details] [associations]
symbol:Herc2 "hect (homologous to the E6-AP (UBE3A) carboxyl
terminus) domain and RCC1 (CHC1)-like domain (RLD) 2" species:10090
"Mus musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;IBA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO;IBA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005743 "mitochondrial inner membrane"
evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0006281
"DNA repair" evidence=ISO] [GO:0006464 "cellular protein
modification process" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=ISO] [GO:0007283 "spermatogenesis"
evidence=IMP] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016874
"ligase activity" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=ISO] [GO:0032183 "SUMO binding" evidence=ISO] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=IBA] [GO:0046872 "metal ion binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS00191 PROSITE:PS01357 PROSITE:PS50082
PROSITE:PS50135 PROSITE:PS50237 PROSITE:PS50255 PROSITE:PS50294
PROSITE:PS51416 SMART:SM00119 SMART:SM00291 UniPathway:UPA00143
MGI:MGI:103234 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005814 PROSITE:PS00678 GO:GO:0005743 GO:GO:0046872
GO:GO:0008270 GO:GO:0006281 GO:GO:0007283 GO:GO:0020037
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256
PROSITE:PS51284 GO:GO:0042787 GO:GO:0032183 Gene3D:2.30.30.30
InterPro:IPR021097 InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
eggNOG:COG5021 GeneTree:ENSGT00700000104208 CTD:8924 KO:K10595
OMA:QLAFTRD HOVERGEN:HBG081598 OrthoDB:EOG41C6V9 InterPro:IPR006624
SMART:SM00706 EMBL:AF061529 EMBL:AF071173 EMBL:AC102121
EMBL:AC102150 EMBL:AK141515 EMBL:AK148361 EMBL:AK161826
EMBL:AK162270 EMBL:AK162708 EMBL:AK220338 EMBL:BC044667
EMBL:BC054829 IPI:IPI00309574 IPI:IPI00314989 RefSeq:NP_034548.2
UniGene:Mm.20929 ProteinModelPortal:Q4U2R1 SMR:Q4U2R1 STRING:Q4U2R1
PhosphoSite:Q4U2R1 PaxDb:Q4U2R1 PRIDE:Q4U2R1
Ensembl:ENSMUST00000076226 Ensembl:ENSMUST00000164095 GeneID:15204
KEGG:mmu:15204 UCSC:uc009hdv.1 InParanoid:Q4U2R1 ChiTaRS:HERC2
NextBio:287753 Bgee:Q4U2R1 Genevestigator:Q4U2R1
GermOnline:ENSMUSG00000030451 Uniprot:Q4U2R1
Length = 4836
Score = 248 (92.4 bits), Expect = 5.7e-18, P = 5.7e-18
Identities = 82/302 (27%), Positives = 139/302 (46%)
Query: 50 PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
P + L L Q+ + +SRN ++ N + + +Q + S +IV+
Sbjct: 443 PIQCEGLASLGVMQVACAEKRFLILSRNGRV-YTQAYNSDMLAP-QLVQGLA-SRNIVKI 499
Query: 110 SAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG---P-ETTQCVS-FTRINFPSAAH 164
+A + G ++ L + V+S G G LGHG P E + +S F+ + H
Sbjct: 500 AAHS----DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFS--GKQAGKH 553
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
VV ++ ++A + G+++T G + GH + P LV LKG+ V G
Sbjct: 554 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACG 612
Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
L + G V + G +G+LG G + TPK I L+++ V+++ G + +
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVIKVRCGSQFSI 671
Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
A+T +G VYS+G G N LGHG + P+ ++ + K V+ V+AG H +AL
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGK--KVIDVAAGSTHCLALTEDS 729
Query: 343 YV 344
V
Sbjct: 730 EV 731
Score = 245 (91.3 bits), Expect = 2.6e-17, Sum P(2) = 2.6e-17
Identities = 74/228 (32%), Positives = 107/228 (46%)
Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
GR+ T L + VFS G G LGH C I + ++ +H+A +
Sbjct: 3057 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 3115
Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
SG+++T G GH D N +P++V+ L G QV G T LT G
Sbjct: 3116 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3174
Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
V + G G+LG G + P++I L G V QI G + LA+T +GVV+++G G
Sbjct: 3175 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3233
Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
F LGHG +P+ ++ R K I V V+ G H +A+ SG V
Sbjct: 3234 DYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCLAVTDSGQV 3279
Score = 244 (91.0 bits), Expect = 4.2e-17, Sum P(2) = 4.2e-17
Identities = 76/250 (30%), Positives = 117/250 (46%)
Query: 97 LQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR 156
L+S++H ++ A N + G++ L S V+S G + G LGHG + C
Sbjct: 4033 LESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRV 4086
Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
I VV V+A H+A V +G ++T G GH D+ + +P+LVEAL+G
Sbjct: 4087 IESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGH 4145
Query: 217 PCKQVTAGLNF--TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 274
+ G T LT V + G +G+LG G + P I L +G VV++
Sbjct: 4146 RVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKV 4204
Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 334
G + +A+T +G VY++G G LGHG +PR +Q + K V+ ++ G H
Sbjct: 4205 ECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGK--KVIAIATGSLH 4262
Query: 335 VVALDSSGYV 344
V G V
Sbjct: 4263 CVCCTEDGEV 4272
Score = 232 (86.7 bits), Expect = 2.7e-15, Sum P(2) = 2.7e-15
Identities = 76/246 (30%), Positives = 121/246 (49%)
Query: 108 ET-SAGNM-QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH 164
ET SA N+ Q+ G ++ V+SCG + G LG G ++ V R +++
Sbjct: 2988 ETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGM-SSGTVPIPRQITALSSY 3046
Query: 165 VVQ---VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
VV+ V + HA + G+VF+ G+ GH + +PRL+EALK + +
Sbjct: 3047 VVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDI 3105
Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGP-- 278
G + + LT G ++T G +G+LGHGD + PK + L +G V+Q+A G
Sbjct: 3106 ACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRD 3163
Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
+ LA+T G+V+S+G G LG G P+ I+ +G V ++ G + +AL
Sbjct: 3164 AQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG--VCQIECGAQFSLAL 3221
Query: 339 DSSGYV 344
SG V
Sbjct: 3222 TKSGVV 3227
Score = 226 (84.6 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 69/224 (30%), Positives = 110/224 (49%)
Query: 127 SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV----VQVSASENHAAFVLQSG 182
++ +++ G G LG G T+ VS T S HV V V++ H + G
Sbjct: 4004 ADGKLYATGYGAGGRLGIGG--TESVS-TPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4060
Query: 183 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
+V++ G+ GH + + P RPR++E+L+G+ V AG + +T G ++T G
Sbjct: 4061 EVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGK 4119
Query: 243 NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLAVTGNGVVYSFGSGSNFC 300
+G+LGH D+ D+ PK + L+ V+ IA +G + L +T + V+S+G G
Sbjct: 4120 GRYGRLGHSDSEDQLKPKLVEALQG-HRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 4178
Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
LG G P I + G+ VV+V G + VAL SG V
Sbjct: 4179 LGRGGSDGCKVPMKIDSLT--GLGVVKVECGSQFSVALTKSGAV 4220
Score = 201 (75.8 bits), Expect = 2.3e-11, Sum P(2) = 2.3e-11
Identities = 66/225 (29%), Positives = 100/225 (44%)
Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
I G H+ L S+ +++ G G LGHG TTQ + + V+QV+
Sbjct: 3105 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3163
Query: 175 AAFVL--QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
A + G VF+ GD G R + P+ +E L G Q+ G F+ LT
Sbjct: 3164 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3222
Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
G V T G + +LGHG + P+ + L +V +A G + LAVT +G VY+
Sbjct: 3223 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGK-KIVHVAVGALHCLAVTDSGQVYA 3281
Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
+G + G+G +P +Q +G + RV+ G H VA
Sbjct: 3282 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3324
Score = 168 (64.2 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 51/162 (31%), Positives = 78/162 (48%)
Query: 183 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
+VF G N G ++ I P E L + QV G +T+ G V++CG
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGE 3019
Query: 243 NTHGQLGHGDTLDR-PTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
T+G+LG G + P P+ I L V V + +G + A+T +G V+S+G G +
Sbjct: 3020 ATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3079
Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
LGH + + +PR I+ + K I ++ G H AL SSG
Sbjct: 3080 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSG 3119
Score = 166 (63.5 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 62/260 (23%), Positives = 112/260 (43%)
Query: 84 NRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLG 143
NR + RV+ L+ +E +V+ +AG G + + + +++ G G LG
Sbjct: 4077 NRSPCDRPRVIESLRGIE----VVDVAAG------GAHSACVTAAGDLYTWGKGRYGRLG 4126
Query: 144 HGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ--VFTCGDNSSFCCGHRDTN 201
H Q + + V+ ++ A + + V++ GD G R +
Sbjct: 4127 HSDSEDQ-LKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG-RGGS 4184
Query: 202 RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 261
P +++L G+ +V G F+ LT G V+T G + +LGHG P+
Sbjct: 4185 DGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQ 4244
Query: 262 IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 321
+ L+ V+ IA G + + T +G VY++G LG G + +PR + + K
Sbjct: 4245 VQGLQGK-KVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGK 4303
Query: 322 GIHVVRVSAGDEHVVALDSS 341
++ RV+ G H +A +S
Sbjct: 4304 KVN--RVACGSAHTLAWSTS 4321
Score = 163 (62.4 bits), Expect = 6.9e-08, P = 6.9e-08
Identities = 58/224 (25%), Positives = 100/224 (44%)
Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF--V 178
Y + + +++ G G LGHG + + V+ V+ A V
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAV 621
Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
++GQV++ GD G R + P+L+E L+ + +V G F+ LT G V+
Sbjct: 622 TENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVY 680
Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
+ G + +LGHG PK + L+ V+ +AAG ++ LA+T + V+S+GS
Sbjct: 681 SWGKGDNQRLGHGTEEHVRYPKLLEGLQGK-KVIDVAAGSTHCLALTEDSEVHSWGSNDQ 739
Query: 299 FCLGHGE--QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
C H + + + +P A+ K H+V ++ G A S
Sbjct: 740 -CQ-HFDTLRVTKPEPTALPGLDSK--HIVGIACGPAQSFAWSS 779
Score = 153 (58.9 bits), Expect = 6.8e-06, Sum P(2) = 6.8e-06
Identities = 48/163 (29%), Positives = 77/163 (47%)
Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
SG ++ G N G + + + P EAL + Q+ G +T G ++
Sbjct: 3953 SGTIYGWGHNHRGQLGGIEGAK-VKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4011
Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
G G+LG G T TP + ++ V V + +G + LA++ G VYS+G +
Sbjct: 4012 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4071
Query: 300 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
LGHG + +PR I++ R GI VV V+AG H + ++G
Sbjct: 4072 KLGHGNRSPCDRPRVIESLR--GIEVVDVAAGGAHSACVTAAG 4112
Score = 149 (57.5 bits), Expect = 7.3e-05, Sum P(3) = 7.3e-05
Identities = 48/164 (29%), Positives = 74/164 (45%)
Query: 123 TLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQS 181
TL +++ VFS G G LG G + C I + V Q+ + + +S
Sbjct: 3166 TLALTDEGLVFSWGDGDFGKLGRGG-SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKS 3224
Query: 182 GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 241
G V+T G F GH ++ + +P++VE L+G V G +T G V+ G
Sbjct: 3225 GVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWG 3283
Query: 242 SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
N HGQ G+G T P + LE + ++A G S+ +A T
Sbjct: 3284 DNDHGQQGNGTTTVNRKPTLVQGLEGQ-KITRVACGSSHSVAWT 3326
Score = 144 (55.7 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 51/169 (30%), Positives = 76/169 (44%)
Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
+G TL ++ N V+S G G LG G + C + I V++V +
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDGCKTPKLIEKLQDLDVIKVRCGSQFSI 671
Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
+ + GQV++ G + GH T + P+L+E L+G V AG LT
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730
Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
VH+ GSN Q H DTL +P P ++ L+ +V IA GP+ A
Sbjct: 731 VHSWGSNDQCQ--HFDTLRVTKPEPTALPGLDSK-HIVGIACGPAQSFA 776
Score = 43 (20.2 bits), Expect = 2.6e-17, Sum P(2) = 2.6e-17
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 62 SQLCALHSIYAGM-SRNVQIE 81
SQLC++ YAG S Q+E
Sbjct: 2170 SQLCSVTQSYAGKTSERAQLE 2190
Score = 40 (19.1 bits), Expect = 7.3e-05, Sum P(3) = 7.3e-05
Identities = 13/63 (20%), Positives = 27/63 (42%)
Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
+ L+ G+G +Y +G LG E P + + V++ G++ + A+
Sbjct: 3946 WTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAT--LRPVQLIGGEQTLFAVT 4003
Query: 340 SSG 342
+ G
Sbjct: 4004 ADG 4006
Score = 39 (18.8 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 12/50 (24%), Positives = 21/50 (42%)
Query: 15 SHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQL 64
+ ++ E+L S E+ S G YPQ L++L ++L
Sbjct: 3548 TRVVVELLKLSVCSRAGDKGREVLSAVLSGMGTAYPQVADMLLELCVTEL 3597
>MGI|MGI:1914388 [details] [associations]
symbol:Herc6 "hect domain and RLD 6" species:10090 "Mus
musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;IBA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=ISO;IBA] [GO:0006464 "cellular protein modification
process" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0030332 "cyclin binding" evidence=ISO] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IBA] [GO:0045087 "innate immune response"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 MGI:MGI:1914388 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005829 GO:GO:0005634 GO:GO:0005737 GO:GO:0045087
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0042787 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
CTD:55008 OMA:HIFAGTY EMBL:AC127307 EMBL:AC142212 EMBL:AK017888
EMBL:AK149648 IPI:IPI00850197 RefSeq:NP_080268.1 UniGene:Mm.297393
ProteinModelPortal:F2Z461 SMR:F2Z461 PRIDE:F2Z461
Ensembl:ENSMUST00000031817 GeneID:67138 KEGG:mmu:67138
ChiTaRS:HERC6 NextBio:323692 Bgee:F2Z461 Uniprot:F2Z461
Length = 1003
Score = 242 (90.2 bits), Expect = 6.4e-18, P = 6.4e-18
Identities = 74/239 (30%), Positives = 118/239 (49%)
Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSAS 171
+Q +G +H+LL+ SN V+SCG + G LG ++T+ I + HV VS
Sbjct: 25 LQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPE--PIQALNDLHVDLVSCG 82
Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
+ H+ V G+VF G S G + F P ++AL G+ QV+ G + L
Sbjct: 83 KEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGHYHSLAL 142
Query: 232 TIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
+ GHV + G N+ GQLG G ++ + P+ + LE + + Q+AAG ++ A++ G
Sbjct: 143 SEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGI-PLAQVAAGGTHSFALSLTGT- 200
Query: 291 YSFGSGSN----FCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
SFG GSN L + +++ +P +I K + V+ +S G EH L G V
Sbjct: 201 -SFGWGSNRSGQLALSGNKVKEQIYKPHSIGAL--KNLSVIYISCGYEHTAVLTEEGQV 256
Score = 204 (76.9 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 73/261 (27%), Positives = 124/261 (47%)
Query: 86 CNGN-WKRV-LRFLQSVEHSSDIVETSAGNMQITT-GRYHTLLISNSS-VFSCGSSLCGV 141
C N W ++ R QS E I + ++ + + G+ H++ + + VF+ G+ G
Sbjct: 46 CGDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQ 105
Query: 142 LGHGPETTQCVSF--TRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRD 199
LG G E + +SF T+I + ++QVS H+ + + G VF+ G NS G
Sbjct: 106 LGIG-EFKE-ISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGK 163
Query: 200 TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGDTLDRPT 258
+R P+ V++L+G+P QV AG + L++ G GSN GQL G+ +
Sbjct: 164 NSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQI 223
Query: 259 --PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
P SI L+ + SV+ I+ G + +T G V++FG S+ L + + P+ I+
Sbjct: 224 YKPHSIGALKNL-SVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRGPQLIE 282
Query: 317 TFRRKGIHVVRVSAGDEHVVA 337
G V ++ H +A
Sbjct: 283 GI---GGRVSQIECASYHTIA 300
Score = 191 (72.3 bits), Expect = 8.4e-12, P = 8.4e-12
Identities = 51/184 (27%), Positives = 97/184 (52%)
Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
S ++Q ++ E+H+ + + +V++CGDNS G R ++ RP ++AL +
Sbjct: 20 SGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQR-RDQSTERPEPIQALNDLHVDL 78
Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPS 279
V+ G + + +G V G+ + GQLG G+ + P I L + ++Q++ G
Sbjct: 79 VSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGI-KIIQVSCGHY 137
Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
+ LA++ +G V+S+G S LG G+ + P+ +++ +GI + +V+AG H AL
Sbjct: 138 HSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSL--EGIPLAQVAAGGTHSFAL 195
Query: 339 DSSG 342
+G
Sbjct: 196 SLTG 199
Score = 161 (61.7 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 54/197 (27%), Positives = 82/197 (41%)
Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
+Q++ G YH+L +S VFS G + G LG G + ++ + QV+A
Sbjct: 130 IQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGG 189
Query: 173 NHAAFVLQSGQVFTCGDNSS--FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
H+ + +G F G N S I++P + ALK + ++ G T
Sbjct: 190 THSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAV 249
Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
LT G V T G N+ GQL + P+ I + G V QI SY + +
Sbjct: 250 LTEEGQVFTFGGNSSGQLQPSPRSGQRGPQLIEGIG--GRVSQIECA-SY------HTIA 300
Query: 291 YSFGSGSNFCLGHGEQH 307
Y + +G LG G H
Sbjct: 301 YVYTTGQVVSLGRGPSH 317
Score = 159 (61.0 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 43/141 (30%), Positives = 71/141 (50%)
Query: 206 RPRLVEA-LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
+PR ++A G+ Q +G + + L V++CG N+ GQLG P+ I
Sbjct: 11 KPRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQA 70
Query: 265 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD-ELQPRAIQTFRRKGI 323
L ++ V ++ G + +AV G V+++G+GS LG GE + P I+ GI
Sbjct: 71 LNDL-HVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALA--GI 127
Query: 324 HVVRVSAGDEHVVALDSSGYV 344
+++VS G H +AL G+V
Sbjct: 128 KIIQVSCGHYHSLALSEDGHV 148
>ZFIN|ZDB-GENE-090311-16 [details] [associations]
symbol:si:ch211-281g13.4 "si:ch211-281g13.4"
species:7955 "Danio rerio" [GO:0006464 "cellular protein
modification process" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-090311-16 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
eggNOG:COG5021 HOGENOM:HOG000208452 HOVERGEN:HBG050878
GeneTree:ENSGT00700000104312 EMBL:BX321880 IPI:IPI00923765
RefSeq:NP_001139174.1 UniGene:Dr.150552 Ensembl:ENSDART00000138510
GeneID:794323 NextBio:20931808 Uniprot:B8A4S5
Length = 985
Score = 239 (89.2 bits), Expect = 1.7e-17, P = 1.7e-17
Identities = 58/174 (33%), Positives = 89/174 (51%)
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
V+Q++ + H+ + GQ+F G+N+ G R I P+ +++L G+P Q++AG
Sbjct: 120 VIQIACGDQHSVALSNDGQLFVWGENAHGQLGLRKEQALIQSPQHLQSLCGIPVAQISAG 179
Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
N + L++ G V GSN+ GQLG GDT DR P + L V I+ G + +
Sbjct: 180 GNHSFVLSLSGVVFGWGSNSAGQLGLGDTTDRFVPTIVKSLSGK-KTVSISCGGEHTATL 238
Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
+ G V++FGSG LGH DE PR + G V +V+ G H + L
Sbjct: 239 SKGGTVFTFGSGGFGQLGHNSLKDEHHPRLVAELW--GSKVSQVTCGRHHTLVL 290
Score = 226 (84.6 bits), Expect = 6.9e-16, P = 6.9e-16
Identities = 77/231 (33%), Positives = 107/231 (46%)
Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
+QI G H++ +SN +F G + G LG E S + V Q+SA
Sbjct: 121 IQIACGDQHSVALSNDGQLFVWGENAHGQLGLRKEQALIQSPQHLQSLCGIPVAQISAGG 180
Query: 173 NHAAFVLQ-SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
NH+ FVL SG VF G NS+ G DT F P +V++L G ++ G T L
Sbjct: 181 NHS-FVLSLSGVVFGWGSNSAGQLGLGDTTDR-FVPTIVKSLSGKKTVSISCGGEHTATL 238
Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLAVTG-NGV 289
+ G V T GS GQLGH D P+ +A L GS V Q+ G + L +
Sbjct: 239 SKGGTVFTFGSGGFGQLGHNSLKDEHHPRLVAELW--GSKVSQVTCGRHHTLVLVALTNR 296
Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAI--QTFRRKGIHVVRVSAGDEHVVAL 338
+YSFG G LG+GEQ + P + T + ++ AG++H AL
Sbjct: 297 IYSFGCGMQGQLGNGEQVKQSVPLPVLLPTDCNCEFTMEKIIAGEKHSFAL 347
Score = 136 (52.9 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 40/138 (28%), Positives = 64/138 (46%)
Query: 208 RLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGDTLDRPTPKSIAPLE 266
R ++ L Q+ G + L+ G + G N HGQLG + +P+ + L
Sbjct: 110 RPLKGLDNTKVIQIACGDQHSVALSNDGQLFVWGENAHGQLGLRKEQALIQSPQHLQSLC 169
Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
+ V QI+AG ++ ++ +GVV+ +GS S LG G+ D P +++ G V
Sbjct: 170 GI-PVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTTDRFVPTIVKSL--SGKKTV 226
Query: 327 RVSAGDEHVVALDSSGYV 344
+S G EH L G V
Sbjct: 227 SISCGGEHTATLSKGGTV 244
>ZFIN|ZDB-GENE-090311-56 [details] [associations]
symbol:si:ch73-190m4.1 "si:ch73-190m4.1"
species:7955 "Danio rerio" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0006464 "cellular protein modification process" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-090311-56
GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 GeneTree:ENSGT00700000104312
EMBL:CR788312 EMBL:CU467858 IPI:IPI00933554 RefSeq:XP_688463.5
UniGene:Dr.113692 UniGene:Dr.113776 Ensembl:ENSDART00000111114
GeneID:559981 KEGG:dre:559981 NextBio:20883233 Uniprot:F1RDE7
Length = 992
Score = 239 (89.2 bits), Expect = 1.7e-17, P = 1.7e-17
Identities = 58/177 (32%), Positives = 90/177 (50%)
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
V+Q++ + H+ + GQ+F G+N+ G R PR +++L G+P Q++AG
Sbjct: 120 VIQIACGDQHSMALTNDGQLFVWGENALGQLGLRKEQAGTQSPRHLQSLCGIPVAQISAG 179
Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
N + L++ G V G N+ GQLG GDT DR P + L+ +V I+ G + A+
Sbjct: 180 GNHSFVLSLSGVVFGWGGNSAGQLGLGDTTDRFVPTVVNSLKRK-KIVSISCGGEHTAAL 238
Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
G V++FGSG LGH DE PR + G V +V+ G H + +S
Sbjct: 239 AKGGTVFTFGSGGFGQLGHNSFKDEHHPRLVAELW--GSKVSQVTCGRNHTLVSTAS 293
Score = 227 (85.0 bits), Expect = 5.3e-16, P = 5.3e-16
Identities = 77/231 (33%), Positives = 107/231 (46%)
Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
+QI G H++ ++N +F G + G LG E S + V Q+SA
Sbjct: 121 IQIACGDQHSMALTNDGQLFVWGENALGQLGLRKEQAGTQSPRHLQSLCGIPVAQISAGG 180
Query: 173 NHAAFVLQ-SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
NH+ FVL SG VF G NS+ G DT F P +V +LK ++ G T L
Sbjct: 181 NHS-FVLSLSGVVFGWGGNSAGQLGLGDTTDR-FVPTVVNSLKRKKIVSISCGGEHTAAL 238
Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLAVTGNG-V 289
G V T GS GQLGH D P+ +A L GS V Q+ G ++ L T + +
Sbjct: 239 AKGGTVFTFGSGGFGQLGHNSFKDEHHPRLVAELW--GSKVSQVTCGRNHTLVSTASPKL 296
Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQ--TFRRKGIHVVRVSAGDEHVVAL 338
+YSFG G LG+GEQ + P + T + ++ AG+ H AL
Sbjct: 297 IYSFGCGMQGQLGNGEQVKQSVPLPVDQPTEYNDEYTIQKLVAGENHSFAL 347
Score = 146 (56.5 bits), Expect = 8.9e-07, P = 8.9e-07
Identities = 48/168 (28%), Positives = 77/168 (45%)
Query: 183 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEA--LKGVPCKQV---TAGLNFTGFLTIRGHV 237
++ CG+ + D + + + E LKG+ +QV G + LT G +
Sbjct: 82 RLIVCGEYGAVLLD--DGGKVLIMDKSTECSPLKGLENRQVIQIACGDQHSMALTNDGQL 139
Query: 238 HTCGSNTHGQLG-HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
G N GQLG + +P+ + L + V QI+AG ++ ++ +GVV+ +G
Sbjct: 140 FVWGENALGQLGLRKEQAGTQSPRHLQSLCGI-PVAQISAGGNHSFVLSLSGVVFGWGGN 198
Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
S LG G+ D P + + +RK I V +S G EH AL G V
Sbjct: 199 SAGQLGLGDTTDRFVPTVVNSLKRKKI--VSISCGGEHTAALAKGGTV 244
>WB|WBGene00021685 [details] [associations]
symbol:herc-1 species:6239 "Caenorhabditis elegans"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0006464 "cellular
protein modification process" evidence=IEA] [GO:0019915 "lipid
storage" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
GO:GO:0000003 GO:GO:0019915 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00660000095216 HOGENOM:HOG000208452 EMBL:FO081800
HSSP:Q05086 RefSeq:NP_490834.1 ProteinModelPortal:Q9BL11 SMR:Q9BL11
STRING:Q9BL11 PaxDb:Q9BL11 EnsemblMetazoa:Y48G8AL.1.1
EnsemblMetazoa:Y48G8AL.1.2 GeneID:171700 KEGG:cel:CELE_Y48G8AL.1
UCSC:Y48G8AL.1 CTD:171700 WormBase:Y48G8AL.1 InParanoid:Q9BL11
OMA:PRELMEL NextBio:872357 Uniprot:Q9BL11
Length = 1019
Score = 239 (89.2 bits), Expect = 1.7e-17, P = 1.7e-17
Identities = 72/232 (31%), Positives = 118/232 (50%)
Query: 109 TSAGNMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ 167
+SA +QI+ GR HT+ +++ VF+ GS+ G LG + T + R+ +VQ
Sbjct: 92 SSAKIIQISAGRSHTVSVTDDGRVFAWGSNEHGQLGMESKFTWQGTPRRVQ--EINDIVQ 149
Query: 168 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
V++ NH + + G+VF G+ + C HR P VE L GVP +V AG
Sbjct: 150 VASGSNHCIALDEGGRVFVWGEQADGRCIHR--------PEPVEQLSGVPIVRVLAGARH 201
Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
L+ G V T G N G+LG D + + + + ++ +G VV+ A G ++ + +T
Sbjct: 202 CLALSASGAVFTWGQNNSGELGIDDLRPQTSVQHVHQMDGLG-VVEAACGDNHTVLLTHC 260
Query: 288 GVVYSFGSGSNFCLGHGEQHDE-LQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
G +SFGS + G G++ ++ P A+ G HV R++AG H +A+
Sbjct: 261 GRTFSFGSDALGQCGFGKKVEKRTNPTAVSDLI--GSHVTRIAAGACHTIAI 310
Score = 224 (83.9 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 67/230 (29%), Positives = 111/230 (48%)
Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
+T G HT+ ++ + ++S GS++ G LG G T S +++ S+A ++Q+SA +H
Sbjct: 46 VTCGEQHTVFLTKDGKMWSVGSNMDGQLGRGSRTEGSFSIYPVSWTSSAKIIQISAGRSH 105
Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
V G+VF G N G PR V+ + + QV +G N L
Sbjct: 106 TVSVTDDGRVFAWGSNEHGQLGMESKFTWQGTPRRVQEINDIV--QVASGSNHCIALDEG 163
Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
G V G G+ H RP P + L V +V++ AG + LA++ +G V+++G
Sbjct: 164 GRVFVWGEQADGRCIH-----RPEP--VEQLSGV-PIVRVLAGARHCLALSASGAVFTWG 215
Query: 295 SGSNFCLGHGEQHDELQPR-AIQ-TFRRKGIHVVRVSAGDEHVVALDSSG 342
++ LG D+L+P+ ++Q + G+ VV + GD H V L G
Sbjct: 216 QNNSGELGI----DDLRPQTSVQHVHQMDGLGVVEAACGDNHTVLLTHCG 261
Score = 193 (73.0 bits), Expect = 5.1e-12, P = 5.1e-12
Identities = 71/234 (30%), Positives = 105/234 (44%)
Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
+Q+ +G H + + VF G G H PE + +S P +V+V A
Sbjct: 148 VQVASGSNHCIALDEGGRVFVWGEQADGRCIHRPEPVEQLS----GVP----IVRVLAGA 199
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
H + SG VFT G N+S G D RP + V + G+ + G N T LT
Sbjct: 200 RHCLALSASGAVFTWGQNNSGELGIDDL-RPQTSVQHVHQMDGLGVVEAACGDNHTVLLT 258
Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGS-VVQIAAGPSYMLAVTGNGVV 290
G + GS+ GQ G G +++ T P +++ L +GS V +IAAG + +A+ G
Sbjct: 259 HCGRTFSFGSDALGQCGFGKKVEKRTNPTAVSDL--IGSHVTRIAAGACHTIAIC-KGAP 315
Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
Y FG S+ LG+G+ + PR HV V AG + SSG +
Sbjct: 316 YPFGLNSSGQLGNGKIMTQSTPRKTDELD----HVTGVFAGYHQTFFVRSSGTI 365
Score = 185 (70.2 bits), Expect = 4.1e-11, P = 4.1e-11
Identities = 62/222 (27%), Positives = 101/222 (45%)
Query: 129 SSVFSCGSSLCGVLG-HGPETTQCVSFTRINFPS---AAHVVQVSASENHAAFVLQSGQV 184
+ + CG + G LG E+T V I P+ V V+ E H F+ + G++
Sbjct: 3 AELLGCGHTGEGQLGVRLSESTIQVPERIIGAPNDMDGTAVTSVTCGEQHTVFLTKDGKM 62
Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
++ G N G F V Q++AG + T +T G V GSN
Sbjct: 63 WSVGSNMDGQLGRGSRTEGSFSIYPVSWTSSAKIIQISAGRSHTVSVTDDGRVFAWGSNE 122
Query: 245 HGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF-CLG 302
HGQLG + TP+ + +E+ +VQ+A+G ++ +A+ G V+ +G ++ C+
Sbjct: 123 HGQLGMESKFTWQGTPRRV---QEINDIVQVASGSNHCIALDEGGRVFVWGEQADGRCIH 179
Query: 303 HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
E ++L G+ +VRV AG H +AL +SG V
Sbjct: 180 RPEPVEQLS----------GVPIVRVLAGARHCLALSASGAV 211
>UNIPROTKB|Q9BL11 [details] [associations]
symbol:herc-1 "Protein HERC-1" species:6239 "Caenorhabditis
elegans" [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
[GO:0005737 "cytoplasm" evidence=IBA] [GO:0005634 "nucleus"
evidence=IBA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0000003 GO:GO:0019915 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 GeneTree:ENSGT00660000095216 HOGENOM:HOG000208452
EMBL:FO081800 HSSP:Q05086 RefSeq:NP_490834.1
ProteinModelPortal:Q9BL11 SMR:Q9BL11 STRING:Q9BL11 PaxDb:Q9BL11
EnsemblMetazoa:Y48G8AL.1.1 EnsemblMetazoa:Y48G8AL.1.2 GeneID:171700
KEGG:cel:CELE_Y48G8AL.1 UCSC:Y48G8AL.1 CTD:171700
WormBase:Y48G8AL.1 InParanoid:Q9BL11 OMA:PRELMEL NextBio:872357
Uniprot:Q9BL11
Length = 1019
Score = 239 (89.2 bits), Expect = 1.7e-17, P = 1.7e-17
Identities = 72/232 (31%), Positives = 118/232 (50%)
Query: 109 TSAGNMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ 167
+SA +QI+ GR HT+ +++ VF+ GS+ G LG + T + R+ +VQ
Sbjct: 92 SSAKIIQISAGRSHTVSVTDDGRVFAWGSNEHGQLGMESKFTWQGTPRRVQ--EINDIVQ 149
Query: 168 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
V++ NH + + G+VF G+ + C HR P VE L GVP +V AG
Sbjct: 150 VASGSNHCIALDEGGRVFVWGEQADGRCIHR--------PEPVEQLSGVPIVRVLAGARH 201
Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
L+ G V T G N G+LG D + + + + ++ +G VV+ A G ++ + +T
Sbjct: 202 CLALSASGAVFTWGQNNSGELGIDDLRPQTSVQHVHQMDGLG-VVEAACGDNHTVLLTHC 260
Query: 288 GVVYSFGSGSNFCLGHGEQHDE-LQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
G +SFGS + G G++ ++ P A+ G HV R++AG H +A+
Sbjct: 261 GRTFSFGSDALGQCGFGKKVEKRTNPTAVSDLI--GSHVTRIAAGACHTIAI 310
Score = 224 (83.9 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 67/230 (29%), Positives = 111/230 (48%)
Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
+T G HT+ ++ + ++S GS++ G LG G T S +++ S+A ++Q+SA +H
Sbjct: 46 VTCGEQHTVFLTKDGKMWSVGSNMDGQLGRGSRTEGSFSIYPVSWTSSAKIIQISAGRSH 105
Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
V G+VF G N G PR V+ + + QV +G N L
Sbjct: 106 TVSVTDDGRVFAWGSNEHGQLGMESKFTWQGTPRRVQEINDIV--QVASGSNHCIALDEG 163
Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
G V G G+ H RP P + L V +V++ AG + LA++ +G V+++G
Sbjct: 164 GRVFVWGEQADGRCIH-----RPEP--VEQLSGV-PIVRVLAGARHCLALSASGAVFTWG 215
Query: 295 SGSNFCLGHGEQHDELQPR-AIQ-TFRRKGIHVVRVSAGDEHVVALDSSG 342
++ LG D+L+P+ ++Q + G+ VV + GD H V L G
Sbjct: 216 QNNSGELGI----DDLRPQTSVQHVHQMDGLGVVEAACGDNHTVLLTHCG 261
Score = 193 (73.0 bits), Expect = 5.1e-12, P = 5.1e-12
Identities = 71/234 (30%), Positives = 105/234 (44%)
Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
+Q+ +G H + + VF G G H PE + +S P +V+V A
Sbjct: 148 VQVASGSNHCIALDEGGRVFVWGEQADGRCIHRPEPVEQLS----GVP----IVRVLAGA 199
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
H + SG VFT G N+S G D RP + V + G+ + G N T LT
Sbjct: 200 RHCLALSASGAVFTWGQNNSGELGIDDL-RPQTSVQHVHQMDGLGVVEAACGDNHTVLLT 258
Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGS-VVQIAAGPSYMLAVTGNGVV 290
G + GS+ GQ G G +++ T P +++ L +GS V +IAAG + +A+ G
Sbjct: 259 HCGRTFSFGSDALGQCGFGKKVEKRTNPTAVSDL--IGSHVTRIAAGACHTIAIC-KGAP 315
Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
Y FG S+ LG+G+ + PR HV V AG + SSG +
Sbjct: 316 YPFGLNSSGQLGNGKIMTQSTPRKTDELD----HVTGVFAGYHQTFFVRSSGTI 365
Score = 185 (70.2 bits), Expect = 4.1e-11, P = 4.1e-11
Identities = 62/222 (27%), Positives = 101/222 (45%)
Query: 129 SSVFSCGSSLCGVLG-HGPETTQCVSFTRINFPS---AAHVVQVSASENHAAFVLQSGQV 184
+ + CG + G LG E+T V I P+ V V+ E H F+ + G++
Sbjct: 3 AELLGCGHTGEGQLGVRLSESTIQVPERIIGAPNDMDGTAVTSVTCGEQHTVFLTKDGKM 62
Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
++ G N G F V Q++AG + T +T G V GSN
Sbjct: 63 WSVGSNMDGQLGRGSRTEGSFSIYPVSWTSSAKIIQISAGRSHTVSVTDDGRVFAWGSNE 122
Query: 245 HGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF-CLG 302
HGQLG + TP+ + +E+ +VQ+A+G ++ +A+ G V+ +G ++ C+
Sbjct: 123 HGQLGMESKFTWQGTPRRV---QEINDIVQVASGSNHCIALDEGGRVFVWGEQADGRCIH 179
Query: 303 HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
E ++L G+ +VRV AG H +AL +SG V
Sbjct: 180 RPEPVEQLS----------GVPIVRVLAGARHCLALSASGAV 211
>FB|FBgn0035207 [details] [associations]
symbol:CG9153 species:7227 "Drosophila melanogaster"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS;IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 HSSP:Q05086 EMBL:AY128479 ProteinModelPortal:Q8MQN4
SMR:Q8MQN4 PaxDb:Q8MQN4 PRIDE:Q8MQN4 FlyBase:FBgn0035207
InParanoid:Q8MQN4 OrthoDB:EOG4WDBSR ChiTaRS:CG9153
ArrayExpress:Q8MQN4 Bgee:Q8MQN4 Uniprot:Q8MQN4
Length = 1058
Score = 239 (89.2 bits), Expect = 1.8e-17, P = 1.8e-17
Identities = 69/208 (33%), Positives = 107/208 (51%)
Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLG-HGP-ETTQCVSFTRINFPSAAHVVQVSA 170
+QI G H+L L S ++S GS++ G LG + P + T C R+ + ++
Sbjct: 146 VQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIAC 205
Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
NH+ + +SG VF G N+ G D TNR P ++ L+ + + V G F+
Sbjct: 206 GGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRSY--PTQLKTLRTLGVRFVACGDEFSV 263
Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGN 287
FLT G V TCG+ +GQLGHG + + P+ + +E +GS + Q+A G + LA V
Sbjct: 264 FLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMV--MELMGSTITQVACGNRHTLALVPSR 321
Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAI 315
G VY+FG GS+ LG + P+ +
Sbjct: 322 GRVYAFGLGSSGQLGTRSTKSLMLPQVV 349
Score = 216 (81.1 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 68/239 (28%), Positives = 107/239 (44%)
Query: 115 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
Q+ G HTL L + V++CGS+ LGH T + + + ++Q+
Sbjct: 44 QVACGHRHTLFLTATGKVYACGSNDYSQLGHDLPTKRPLLIPELQ---DYVIIQICCGSR 100
Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
H+ + GQV + GDN GH + P++V L Q+ G N + LT
Sbjct: 101 HSLALSDWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTS 160
Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPT---PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
G +++ GSN +GQLG D P + L + + IA G ++ ++ +G V
Sbjct: 161 CGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGI-PLAAIACGGNHSFLISKSGAV 219
Query: 291 YSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSLC 347
FG G N C LG ++ + P ++T R G+ V + GDE V L + G V C
Sbjct: 220 --FGWGRNNCGQLGLNDETNRSYPTQLKTLRTLGVRFV--ACGDEFSVFLTNEGGVFTC 274
Score = 207 (77.9 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 69/225 (30%), Positives = 103/225 (45%)
Query: 125 LISNSSVFSCGSSLCGVLGHGP-ETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 183
+ S ++ GS+ G LG G E Q ++ ++I + V QV+ H F+ +G+
Sbjct: 1 MASGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGK 60
Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
V+ CG N GH + P RP L+ L+ Q+ G + L+ G V + G N
Sbjct: 61 VYACGSNDYSQLGH---DLPTKRPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDN 117
Query: 244 THGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
GQLGH D PK + L +VVQIA G ++ LA+T G +YS+GS LG
Sbjct: 118 DCGQLGHATDKEIVQLPKVVRQLV-TKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLG 176
Query: 303 HGEQHDELQ---PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
+D P + T GI + ++ G H + SG V
Sbjct: 177 VNSPNDLTHCNYPLRLTTLL--GIPLAAIACGGNHSFLISKSGAV 219
>TAIR|locus:505006603 [details] [associations]
symbol:AT5G12350 "AT5G12350" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=ISS] [GO:0008536 "Ran GTPase binding" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0009630 "gravitropism" evidence=RCA]
[GO:0009887 "organ morphogenesis" evidence=RCA] [GO:0009888 "tissue
development" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0010638 "positive regulation of
organelle organization" evidence=RCA] [GO:0033044 "regulation of
chromosome organization" evidence=RCA] [GO:0042546 "cell wall
biogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045492 "xylan biosynthetic
process" evidence=RCA] InterPro:IPR000306 InterPro:IPR001849
InterPro:IPR024774 Pfam:PF01363 Pfam:PF12814 SMART:SM00064
SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005886
GO:GO:0005938 EMBL:CP002688 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0046872 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0032065 InterPro:IPR013591 Pfam:PF08381
PROSITE:PS51514 IPI:IPI00540281 RefSeq:NP_568268.3 UniGene:At.22310
UniGene:At.51056 ProteinModelPortal:F4K0X5 SMR:F4K0X5
EnsemblPlants:AT5G12350.1 GeneID:831110 KEGG:ath:AT5G12350
OMA:NTNGHPR Uniprot:F4K0X5
Length = 1075
Score = 239 (89.2 bits), Expect = 1.9e-17, P = 1.9e-17
Identities = 73/249 (29%), Positives = 113/249 (45%)
Query: 116 ITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
I G YHT +++++ +F+ G GVLGHG + + + ++ V+ + H
Sbjct: 418 IACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIP-REVDSLKGLRTVRAACGVWH 476
Query: 175 AAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
A V++ SG++FT GD GH + P P V AL QV
Sbjct: 477 TAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGN-KEPKLVPTCVAALVEPNFCQVA 535
Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
G + T LT GHV+T GS +GQLG+ D TP + V +IA G ++
Sbjct: 536 CGHSLTVALTTSGHVYTMGSPVYGQLGNSHA-DGKTPNRVEGKLHKSFVEEIACGAYHVA 594
Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD--S 340
+T VY++G GSN LGHG+ D P +++ + K + + V + +
Sbjct: 595 VLTSRTEVYTWGKGSNGRLGHGDVDDRNSPTLVESLKDKQVKSIACGTNFTAAVCIHRWA 654
Query: 341 SGY-VSLCS 348
SG S+CS
Sbjct: 655 SGMDQSMCS 663
Score = 225 (84.3 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 56/175 (32%), Positives = 88/175 (50%)
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHR-DTNRPIFRPRLVEALKGVPCKQVTA 223
V ++ HA V + G+ F+ G+ S GH D+N I +P+L++AL + V
Sbjct: 310 VQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSN--IQQPKLIDALNTTNIELVAC 367
Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
G + +T+ G ++T G G LGHG+ + PK + L E V IA GP +
Sbjct: 368 GEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNFLLEGIHVSSIACGPYHTAV 427
Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
VT G +++FG G+ LGHG++ PR + + KG+ VR + G H A+
Sbjct: 428 VTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSL--KGLRTVRAACGVWHTAAV 480
Score = 183 (69.5 bits), Expect = 7.3e-11, P = 7.3e-11
Identities = 62/243 (25%), Positives = 103/243 (42%)
Query: 116 ITTGRYHTLLISNSSV-FSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
I G H +L++ FS G G LGHG ++ + + I+ + ++ V+ E
Sbjct: 313 IACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSN--IQQPKLIDALNTTNIELVACGEF 370
Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
H+ V SG ++T G GH + R+ L+G+ + G T +T
Sbjct: 371 HSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNFLLEGIHVSSIACGPYHTAVVTS 430
Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE------------EVGSVVQIAAGPSYM 281
G + T G T G LGHGD P+ + L+ +VV++ G S
Sbjct: 431 AGQLFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 490
Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
+ +G ++++G G LGHG + +L P + +V+ G VAL +S
Sbjct: 491 -SNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPNF--CQVACGHSLTVALTTS 547
Query: 342 GYV 344
G+V
Sbjct: 548 GHV 550
Score = 155 (59.6 bits), Expect = 9.8e-08, P = 9.8e-08
Identities = 38/136 (27%), Positives = 66/136 (48%)
Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
P+ +E+ + + + G +T +G + G + G+LGHG + PK I L
Sbjct: 299 PKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQPKLIDALN 358
Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
++ +A G + AVT +G +Y++G G LGHG + P+ + F +GIHV
Sbjct: 359 TT-NIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVN-FLLEGIHVS 416
Query: 327 RVSAGDEHVVALDSSG 342
++ G H + S+G
Sbjct: 417 SIACGPYHTAVVTSAG 432
Score = 147 (56.8 bits), Expect = 7.6e-07, P = 7.6e-07
Identities = 55/211 (26%), Positives = 94/211 (44%)
Query: 94 LRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVS 153
L+ L++V + + T+A +++ G + S+ +F+ G G LGHG + + V
Sbjct: 462 LKGLRTVRAACGVWHTAAV-VEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVP 520
Query: 154 FTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCG--HRDTNRPIFRPRLVE 211
T + + QV+ + + SG V+T G G H D P R+
Sbjct: 521 -TCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNSHADGKTP---NRVEG 576
Query: 212 ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV 271
L +++ G LT R V+T G ++G+LGHGD DR +P + L++ V
Sbjct: 577 KLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDVDDRNSPTLVESLKDK-QV 635
Query: 272 VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
IA G ++ AV + ++ G + C G
Sbjct: 636 KSIACGTNFTAAVCIHR--WASGMDQSMCSG 664
>ZFIN|ZDB-GENE-070615-14 [details] [associations]
symbol:zgc:163136 "zgc:163136" species:7955 "Danio
rerio" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0006464
"cellular protein modification process" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 ZFIN:ZDB-GENE-070615-14 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00700000104312 EMBL:BX321880 IPI:IPI00852092
Ensembl:ENSDART00000113072 OMA:CELECKL Bgee:F1Q5I9 Uniprot:F1Q5I9
Length = 997
Score = 236 (88.1 bits), Expect = 4.1e-17, P = 4.1e-17
Identities = 59/181 (32%), Positives = 91/181 (50%)
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
V+Q++ + H+ + GQ+F G+N+ G R P+ +++L G+P Q++AG
Sbjct: 118 VIQIACGDQHSMALTNDGQLFVWGENALGQLGLRKEQAGTQSPQHLQSLCGIPVAQISAG 177
Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
N + L++ G V GSN+ GQLG GDT DR P + L V I+ G + +
Sbjct: 178 GNHSFVLSLSGVVFGWGSNSAGQLGLGDTTDRFIPTIVKSLSGK-KTVSISCGGEHTATL 236
Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGY 343
+ G V++FGSG LGH DE PR + G V +V+ G H + DSS
Sbjct: 237 SKGGTVFTFGSGGFGQLGHNSLKDEHHPRLVAELW--GSKVSQVTCGRHHTLVFEDSSNQ 294
Query: 344 V 344
+
Sbjct: 295 I 295
Score = 220 (82.5 bits), Expect = 3.7e-15, P = 3.7e-15
Identities = 75/230 (32%), Positives = 105/230 (45%)
Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
+QI G H++ ++N +F G + G LG E S + V Q+SA
Sbjct: 119 IQIACGDQHSMALTNDGQLFVWGENALGQLGLRKEQAGTQSPQHLQSLCGIPVAQISAGG 178
Query: 173 NHAAFVLQ-SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
NH+ FVL SG VF G NS+ G DT F P +V++L G ++ G T L
Sbjct: 179 NHS-FVLSLSGVVFGWGSNSAGQLGLGDTTDR-FIPTIVKSLSGKKTVSISCGGEHTATL 236
Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLAVT-GNGV 289
+ G V T GS GQLGH D P+ +A L GS V Q+ G + L +
Sbjct: 237 SKGGTVFTFGSGGFGQLGHNSLKDEHHPRLVAELW--GSKVSQVTCGRHHTLVFEDSSNQ 294
Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRR-KGIHVVRVSAGDEHVVAL 338
+YSFG G LG+GEQ + P + + ++ AG+ H AL
Sbjct: 295 IYSFGCGMQGQLGNGEQVKQSVPLPVLLPTECTEFTMEKLIAGENHSFAL 344
Score = 133 (51.9 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 42/136 (30%), Positives = 64/136 (47%)
Query: 213 LKGVPCKQV---TAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGDTLDRPTPKSIAPLEEV 268
LKG+ +QV G + LT G + G N GQLG + +P+ + L +
Sbjct: 110 LKGLENRQVIQIACGDQHSMALTNDGQLFVWGENALGQLGLRKEQAGTQSPQHLQSLCGI 169
Query: 269 GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 328
V QI+AG ++ ++ +GVV+ +GS S LG G+ D P +++ G V +
Sbjct: 170 -PVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTTDRFIPTIVKSL--SGKKTVSI 226
Query: 329 SAGDEHVVALDSSGYV 344
S G EH L G V
Sbjct: 227 SCGGEHTATLSKGGTV 242
>RGD|1307989 [details] [associations]
symbol:Herc2 "HECT and RLD domain containing E3 ubiquitin
protein ligase 2" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;IBA] [GO:0005634
"nucleus" evidence=ISO;IBA] [GO:0005737 "cytoplasm"
evidence=ISO;IBA] [GO:0005743 "mitochondrial inner membrane"
evidence=ISO] [GO:0006281 "DNA repair" evidence=ISO] [GO:0006974
"response to DNA damage stimulus" evidence=ISO] [GO:0007283
"spermatogenesis" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0020037 "heme binding" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=ISO] [GO:0032183 "SUMO binding"
evidence=ISO] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
RGD:1307989 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 GO:GO:0020037
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
GO:GO:0042787 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204 InterPro:IPR006624
SMART:SM00706 IPI:IPI00476523 Ensembl:ENSRNOT00000019318
UCSC:RGD:1307989 ArrayExpress:F1M716 Uniprot:F1M716
Length = 3607
Score = 245 (91.3 bits), Expect = 5.8e-17, Sum P(2) = 5.8e-17
Identities = 74/228 (32%), Positives = 107/228 (46%)
Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
GR+ T L + VFS G G LGH C I + ++ +H+A +
Sbjct: 1865 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 1923
Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
SG+++T G GH D N +P++V+ L G QV G T LT G
Sbjct: 1924 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 1982
Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
V + G G+LG G + P++I L G V QI G + LA+T +GVV+++G G
Sbjct: 1983 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 2041
Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
F LGHG +P+ ++ R K I V V+ G H +A+ SG V
Sbjct: 2042 DYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCLAVTDSGQV 2087
Score = 244 (91.0 bits), Expect = 9.4e-17, Sum P(2) = 9.4e-17
Identities = 76/250 (30%), Positives = 117/250 (46%)
Query: 97 LQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR 156
L+S++H ++ A N + G++ L S V+S G + G LGHG + C
Sbjct: 2805 LESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRV 2858
Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
I VV V+A H+A V +G ++T G GH D+ + +P+LVEAL+G
Sbjct: 2859 IESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGH 2917
Query: 217 PCKQVTAGLNF--TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 274
+ G T LT V + G +G+LG G + P I L +G VV++
Sbjct: 2918 RVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKV 2976
Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 334
G + +A+T +G VY++G G LGHG +PR +Q + K V+ ++ G H
Sbjct: 2977 ECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGK--KVIAIATGSLH 3034
Query: 335 VVALDSSGYV 344
V G V
Sbjct: 3035 CVCCTEDGEV 3044
Score = 232 (86.7 bits), Expect = 6.1e-15, Sum P(2) = 6.1e-15
Identities = 76/246 (30%), Positives = 121/246 (49%)
Query: 108 ET-SAGNM-QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH 164
ET SA N+ Q+ G ++ V+SCG + G LG G ++ V R +++
Sbjct: 1796 ETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGM-SSGTVPIPRQITALSSY 1854
Query: 165 VVQ---VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
VV+ V + HA + G+VF+ G+ GH + +PRL+EALK + +
Sbjct: 1855 VVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDI 1913
Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGP-- 278
G + + LT G ++T G +G+LGHGD + PK + L +G V+Q+A G
Sbjct: 1914 ACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRD 1971
Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
+ LA+T G+V+S+G G LG G P+ I+ +G V ++ G + +AL
Sbjct: 1972 AQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG--VCQIECGAQFSLAL 2029
Query: 339 DSSGYV 344
SG V
Sbjct: 2030 TKSGVV 2035
Score = 226 (84.6 bits), Expect = 4.0e-14, Sum P(2) = 4.0e-14
Identities = 69/224 (30%), Positives = 110/224 (49%)
Query: 127 SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV----VQVSASENHAAFVLQSG 182
++ +++ G G LG G T+ VS T S HV V V++ H + G
Sbjct: 2776 ADGKLYATGYGAGGRLGIGG--TESVS-TPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 2832
Query: 183 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
+V++ G+ GH + + P RPR++E+L+G+ V AG + +T G ++T G
Sbjct: 2833 EVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGK 2891
Query: 243 NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLAVTGNGVVYSFGSGSNFC 300
+G+LGH D+ D+ PK + L+ V+ IA +G + L +T + V+S+G G
Sbjct: 2892 GRYGRLGHSDSEDQLKPKLVEALQG-HRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 2950
Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
LG G P I + G+ VV+V G + VAL SG V
Sbjct: 2951 LGRGGSDGCKVPMKIDSLT--GLGVVKVECGSQFSVALTKSGAV 2992
Score = 201 (75.8 bits), Expect = 5.1e-11, Sum P(2) = 5.1e-11
Identities = 66/225 (29%), Positives = 100/225 (44%)
Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
I G H+ L S+ +++ G G LGHG TTQ + + V+QV+
Sbjct: 1913 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 1971
Query: 175 AAFVL--QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
A + G VF+ GD G R + P+ +E L G Q+ G F+ LT
Sbjct: 1972 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 2030
Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
G V T G + +LGHG + P+ + L +V +A G + LAVT +G VY+
Sbjct: 2031 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGK-KIVHVAVGALHCLAVTDSGQVYA 2089
Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
+G + G+G +P +Q +G + RV+ G H VA
Sbjct: 2090 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 2132
Score = 168 (64.2 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 51/162 (31%), Positives = 78/162 (48%)
Query: 183 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
+VF G N G ++ I P E L + QV G +T+ G V++CG
Sbjct: 1769 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGE 1827
Query: 243 NTHGQLGHGDTLDR-PTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
T+G+LG G + P P+ I L V V + +G + A+T +G V+S+G G +
Sbjct: 1828 ATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 1887
Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
LGH + + +PR I+ + K I ++ G H AL SSG
Sbjct: 1888 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSG 1927
Score = 166 (63.5 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 62/260 (23%), Positives = 112/260 (43%)
Query: 84 NRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLG 143
NR + RV+ L+ +E +V+ +AG G + + + +++ G G LG
Sbjct: 2849 NRSPCDRPRVIESLRGIE----VVDVAAG------GAHSACVTAAGDLYTWGKGRYGRLG 2898
Query: 144 HGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ--VFTCGDNSSFCCGHRDTN 201
H Q + + V+ ++ A + + V++ GD G R +
Sbjct: 2899 HSDSEDQ-LKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG-RGGS 2956
Query: 202 RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 261
P +++L G+ +V G F+ LT G V+T G + +LGHG P+
Sbjct: 2957 DGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQ 3016
Query: 262 IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 321
+ L+ V+ IA G + + T +G VY++G LG G + +PR + + K
Sbjct: 3017 VQGLQGK-KVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGK 3075
Query: 322 GIHVVRVSAGDEHVVALDSS 341
++ RV+ G H +A +S
Sbjct: 3076 KVN--RVACGSAHTLAWSTS 3093
Score = 153 (58.9 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 48/163 (29%), Positives = 77/163 (47%)
Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
SG ++ G N G + + + P EAL + Q+ G +T G ++
Sbjct: 2725 SGTIYGWGHNHRGQLGGIEGAK-VKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 2783
Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
G G+LG G T TP + ++ V V + +G + LA++ G VYS+G +
Sbjct: 2784 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 2843
Query: 300 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
LGHG + +PR I++ R GI VV V+AG H + ++G
Sbjct: 2844 KLGHGNRSPCDRPRVIESLR--GIEVVDVAAGGAHSACVTAAG 2884
Score = 149 (57.5 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 48/164 (29%), Positives = 74/164 (45%)
Query: 123 TLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQS 181
TL +++ VFS G G LG G + C I + V Q+ + + +S
Sbjct: 1974 TLALTDEGLVFSWGDGDFGKLGRGG-SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKS 2032
Query: 182 GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 241
G V+T G F GH ++ + +P++VE L+G V G +T G V+ G
Sbjct: 2033 GVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWG 2091
Query: 242 SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
N HGQ G+G T P + LE + ++A G S+ +A T
Sbjct: 2092 DNDHGQQGNGTTTVNRKPTLVQGLEGQ-KITRVACGSSHSVAWT 2134
Score = 40 (19.1 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 13/63 (20%), Positives = 27/63 (42%)
Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
+ L+ G+G +Y +G LG E P + + V++ G++ + A+
Sbjct: 2718 WTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAT--LRPVQLIGGEQTLFAVT 2775
Query: 340 SSG 342
+ G
Sbjct: 2776 ADG 2778
Score = 37 (18.1 bits), Expect = 5.8e-17, Sum P(2) = 5.8e-17
Identities = 7/12 (58%), Positives = 9/12 (75%)
Query: 62 SQLCALHSIYAG 73
SQLC++ YAG
Sbjct: 978 SQLCSVTQSYAG 989
>UNIPROTKB|F1M560 [details] [associations]
symbol:Herc2 "Protein Herc2" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
RGD:1307989 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0046872
GO:GO:0008270 GO:GO:0020037 GO:GO:0005622 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.10.120.10
SUPFAM:SSF55856 InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939
Pfam:PF03256 PROSITE:PS51284 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204 InterPro:IPR006624
SMART:SM00706 IPI:IPI00779702 Ensembl:ENSRNOT00000055965
ArrayExpress:F1M560 Uniprot:F1M560
Length = 3643
Score = 245 (91.3 bits), Expect = 5.9e-17, Sum P(2) = 5.9e-17
Identities = 74/228 (32%), Positives = 107/228 (46%)
Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
GR+ T L + VFS G G LGH C I + ++ +H+A +
Sbjct: 1865 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 1923
Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
SG+++T G GH D N +P++V+ L G QV G T LT G
Sbjct: 1924 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 1982
Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
V + G G+LG G + P++I L G V QI G + LA+T +GVV+++G G
Sbjct: 1983 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 2041
Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
F LGHG +P+ ++ R K I V V+ G H +A+ SG V
Sbjct: 2042 DYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCLAVTDSGQV 2087
Score = 244 (91.0 bits), Expect = 9.6e-17, Sum P(2) = 9.6e-17
Identities = 76/250 (30%), Positives = 117/250 (46%)
Query: 97 LQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR 156
L+S++H ++ A N + G++ L S V+S G + G LGHG + C
Sbjct: 2841 LESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRV 2894
Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
I VV V+A H+A V +G ++T G GH D+ + +P+LVEAL+G
Sbjct: 2895 IESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGH 2953
Query: 217 PCKQVTAGLNF--TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 274
+ G T LT V + G +G+LG G + P I L +G VV++
Sbjct: 2954 RVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKV 3012
Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 334
G + +A+T +G VY++G G LGHG +PR +Q + K V+ ++ G H
Sbjct: 3013 ECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGK--KVIAIATGSLH 3070
Query: 335 VVALDSSGYV 344
V G V
Sbjct: 3071 CVCCTEDGEV 3080
Score = 232 (86.7 bits), Expect = 6.3e-15, Sum P(2) = 6.3e-15
Identities = 76/246 (30%), Positives = 121/246 (49%)
Query: 108 ET-SAGNM-QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH 164
ET SA N+ Q+ G ++ V+SCG + G LG G ++ V R +++
Sbjct: 1796 ETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGM-SSGTVPIPRQITALSSY 1854
Query: 165 VVQ---VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
VV+ V + HA + G+VF+ G+ GH + +PRL+EALK + +
Sbjct: 1855 VVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDI 1913
Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGP-- 278
G + + LT G ++T G +G+LGHGD + PK + L +G V+Q+A G
Sbjct: 1914 ACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRD 1971
Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
+ LA+T G+V+S+G G LG G P+ I+ +G V ++ G + +AL
Sbjct: 1972 AQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG--VCQIECGAQFSLAL 2029
Query: 339 DSSGYV 344
SG V
Sbjct: 2030 TKSGVV 2035
Score = 226 (84.6 bits), Expect = 4.0e-14, Sum P(2) = 4.0e-14
Identities = 69/224 (30%), Positives = 110/224 (49%)
Query: 127 SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV----VQVSASENHAAFVLQSG 182
++ +++ G G LG G T+ VS T S HV V V++ H + G
Sbjct: 2812 ADGKLYATGYGAGGRLGIGG--TESVS-TPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 2868
Query: 183 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
+V++ G+ GH + + P RPR++E+L+G+ V AG + +T G ++T G
Sbjct: 2869 EVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGK 2927
Query: 243 NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLAVTGNGVVYSFGSGSNFC 300
+G+LGH D+ D+ PK + L+ V+ IA +G + L +T + V+S+G G
Sbjct: 2928 GRYGRLGHSDSEDQLKPKLVEALQG-HRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 2986
Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
LG G P I + G+ VV+V G + VAL SG V
Sbjct: 2987 LGRGGSDGCKVPMKIDSLT--GLGVVKVECGSQFSVALTKSGAV 3028
Score = 201 (75.8 bits), Expect = 5.2e-11, Sum P(2) = 5.2e-11
Identities = 66/225 (29%), Positives = 100/225 (44%)
Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
I G H+ L S+ +++ G G LGHG TTQ + + V+QV+
Sbjct: 1913 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 1971
Query: 175 AAFVL--QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
A + G VF+ GD G R + P+ +E L G Q+ G F+ LT
Sbjct: 1972 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 2030
Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
G V T G + +LGHG + P+ + L +V +A G + LAVT +G VY+
Sbjct: 2031 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGK-KIVHVAVGALHCLAVTDSGQVYA 2089
Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
+G + G+G +P +Q +G + RV+ G H VA
Sbjct: 2090 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 2132
Score = 168 (64.2 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 51/162 (31%), Positives = 78/162 (48%)
Query: 183 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
+VF G N G ++ I P E L + QV G +T+ G V++CG
Sbjct: 1769 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGE 1827
Query: 243 NTHGQLGHGDTLDR-PTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
T+G+LG G + P P+ I L V V + +G + A+T +G V+S+G G +
Sbjct: 1828 ATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 1887
Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
LGH + + +PR I+ + K I ++ G H AL SSG
Sbjct: 1888 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSG 1927
Score = 166 (63.5 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 62/260 (23%), Positives = 112/260 (43%)
Query: 84 NRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLG 143
NR + RV+ L+ +E +V+ +AG G + + + +++ G G LG
Sbjct: 2885 NRSPCDRPRVIESLRGIE----VVDVAAG------GAHSACVTAAGDLYTWGKGRYGRLG 2934
Query: 144 HGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ--VFTCGDNSSFCCGHRDTN 201
H Q + + V+ ++ A + + V++ GD G R +
Sbjct: 2935 HSDSEDQ-LKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG-RGGS 2992
Query: 202 RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 261
P +++L G+ +V G F+ LT G V+T G + +LGHG P+
Sbjct: 2993 DGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQ 3052
Query: 262 IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 321
+ L+ V+ IA G + + T +G VY++G LG G + +PR + + K
Sbjct: 3053 VQGLQGK-KVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGK 3111
Query: 322 GIHVVRVSAGDEHVVALDSS 341
++ RV+ G H +A +S
Sbjct: 3112 KVN--RVACGSAHTLAWSTS 3129
Score = 153 (58.9 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 48/163 (29%), Positives = 77/163 (47%)
Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
SG ++ G N G + + + P EAL + Q+ G +T G ++
Sbjct: 2761 SGTIYGWGHNHRGQLGGIEGAK-VKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 2819
Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
G G+LG G T TP + ++ V V + +G + LA++ G VYS+G +
Sbjct: 2820 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 2879
Query: 300 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
LGHG + +PR I++ R GI VV V+AG H + ++G
Sbjct: 2880 KLGHGNRSPCDRPRVIESLR--GIEVVDVAAGGAHSACVTAAG 2920
Score = 149 (57.5 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 48/164 (29%), Positives = 74/164 (45%)
Query: 123 TLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQS 181
TL +++ VFS G G LG G + C I + V Q+ + + +S
Sbjct: 1974 TLALTDEGLVFSWGDGDFGKLGRGG-SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKS 2032
Query: 182 GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 241
G V+T G F GH ++ + +P++VE L+G V G +T G V+ G
Sbjct: 2033 GVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWG 2091
Query: 242 SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
N HGQ G+G T P + LE + ++A G S+ +A T
Sbjct: 2092 DNDHGQQGNGTTTVNRKPTLVQGLEGQ-KITRVACGSSHSVAWT 2134
Score = 40 (19.1 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 13/63 (20%), Positives = 27/63 (42%)
Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
+ L+ G+G +Y +G LG E P + + V++ G++ + A+
Sbjct: 2754 WTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAT--LRPVQLIGGEQTLFAVT 2811
Query: 340 SSG 342
+ G
Sbjct: 2812 ADG 2814
Score = 37 (18.1 bits), Expect = 5.9e-17, Sum P(2) = 5.9e-17
Identities = 7/12 (58%), Positives = 9/12 (75%)
Query: 62 SQLCALHSIYAG 73
SQLC++ YAG
Sbjct: 978 SQLCSVTQSYAG 989
>ZFIN|ZDB-GENE-030131-7951 [details] [associations]
symbol:rcbtb1 "regulator of chromosome
condensation (RCC1) and BTB (POZ) domain containing protein 1"
species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651
PROSITE:PS50097 SMART:SM00225 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-030131-7951 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
CTD:55213 HOVERGEN:HBG053261 KO:K11494 HSSP:O87916 EMBL:BC045877
IPI:IPI00503126 RefSeq:NP_956285.1 UniGene:Dr.5968
ProteinModelPortal:Q7ZVG0 GeneID:336007 KEGG:dre:336007
InParanoid:Q7ZVG0 NextBio:20811137 ArrayExpress:Q7ZVG0
Uniprot:Q7ZVG0
Length = 531
Score = 227 (85.0 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 62/217 (28%), Positives = 108/217 (49%)
Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
+ V+ G + LG G ++ ++ +++ S ++ +S S H V + G+++
Sbjct: 40 DDEVYVLGLNCSNCLGTG-DSQSTIAPKKLDCLSGKKLISLSYGSGPHVLLVTEDGELYA 98
Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH 245
G N G+ TN+ + P LV L+G +V+ G + + LT G V G N
Sbjct: 99 WGHNGYSQLGNGTTNQGV-SPILVSTNLQGKRVTEVSCGSHHSLALTHEGEVFAWGYNNC 157
Query: 246 GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
GQ+G G T ++PTP+ ++ + +V IA G + +AVT NG VY +G N LG G
Sbjct: 158 GQVGSGSTANQPTPRKVSNCLQNKVIVNIACGQTSSMAVTDNGEVYGWGYNGNGQLGLGN 217
Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
++L P + +G V+++++G H +AL G
Sbjct: 218 NGNQLTP--CRLIALQGFCVLQIASGYAHSLALTDEG 252
Score = 193 (73.0 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 66/229 (28%), Positives = 115/229 (50%)
Query: 122 HTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSASENHAAFVL 179
H LL++ + +++ G + LG+G T Q VS ++ V +VS +H+ +
Sbjct: 86 HVLLVTEDGELYAWGHNGYSQLGNGT-TNQGVSPILVSTNLQGKRVTEVSCGSHHSLALT 144
Query: 180 QSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVE-ALKGVPCKQVTAGLNFTGFLTIRGHV 237
G+VF G N+ G T N+P PR V L+ + G + +T G V
Sbjct: 145 HEGEVFAWGYNNCGQVGSGSTANQPT--PRKVSNCLQNKVIVNIACGQTSSMAVTDNGEV 202
Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
+ G N +GQLG G+ ++ TP + L+ V+QIA+G ++ LA+T G++Y++G+ +
Sbjct: 203 YGWGYNGNGQLGLGNNGNQLTPCRLIALQGF-CVLQIASGYAHSLALTDEGLLYAWGANT 261
Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA-GDEHVVALDS-SGYV 344
LG G + ++L P + T + + +V ++A H A + SG V
Sbjct: 262 YGQLGTGNKSNQLSPVQVMTEKER---IVEIAACHSTHTSAAKTQSGQV 307
Score = 166 (63.5 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 53/194 (27%), Positives = 94/194 (48%)
Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
+++ G +H+L +++ VF+ G + CG +G G Q N +V ++ +
Sbjct: 132 EVSCGSHHSLALTHEGEVFAWGYNNCGQVGSGSTANQPTPRKVSNCLQNKVIVNIACGQT 191
Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
+ V +G+V+ G N + G + + RL+ AL+G Q+ +G + LT
Sbjct: 192 SSMAVTDNGEVYGWGYNGNGQLGLGNNGNQLTPCRLI-ALQGFCVLQIASGYAHSLALTD 250
Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY--MLAVTGNGVVY 291
G ++ G+NT+GQLG G+ ++ +P + + E +V+IAA S A T +G VY
Sbjct: 251 EGLLYAWGANTYGQLGTGNKSNQLSPVQV--MTEKERIVEIAACHSTHTSAAKTQSGQVY 308
Query: 292 SFGS--GSNFCLGH 303
+G G L H
Sbjct: 309 MWGQCRGQAIVLPH 322
Score = 156 (60.0 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 43/176 (24%), Positives = 83/176 (47%)
Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN-FT 228
AS N A ++ +V+ G N S C G D+ I P+ ++ L G ++ G
Sbjct: 29 ASANEAIYITHDDEVYVLGLNCSNCLGTGDSQSTI-APKKLDCLSGKKLISLSYGSGPHV 87
Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
+T G ++ G N + QLG+G T +P ++ + V +++ G + LA+T G
Sbjct: 88 LLVTEDGELYAWGHNGYSQLGNGTTNQGVSPILVSTNLQGKRVTEVSCGSHHSLALTHEG 147
Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
V+++G + +G G ++ PR + + + +V ++ G +A+ +G V
Sbjct: 148 EVFAWGYNNCGQVGSGSTANQPTPRKVSNCLQNKV-IVNIACGQTSSMAVTDNGEV 202
>TAIR|locus:2086253 [details] [associations]
symbol:AT3G23270 "AT3G23270" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0008536 "Ran GTPase binding" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007165 "signal
transduction" evidence=ISS] [GO:0035091 "phosphatidylinositol
binding" evidence=ISS] [GO:0009827 "plant-type cell wall
modification" evidence=RCA] [GO:0009860 "pollen tube growth"
evidence=RCA] InterPro:IPR000306 InterPro:IPR001849
InterPro:IPR024774 Pfam:PF01363 Pfam:PF12814 PROSITE:PS50003
SMART:SM00064 SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005938 EMBL:CP002686 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0046872 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633 PROSITE:PS50012
GO:GO:0032065 InterPro:IPR013591 Pfam:PF08381 PROSITE:PS51514
IPI:IPI00516271 RefSeq:NP_188968.1 UniGene:At.53452
ProteinModelPortal:F4J2Y2 SMR:F4J2Y2 PRIDE:F4J2Y2
EnsemblPlants:AT3G23270.1 GeneID:821906 KEGG:ath:AT3G23270
OMA:PKFRAFR ArrayExpress:F4J2Y2 Uniprot:F4J2Y2
Length = 1045
Score = 231 (86.4 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 71/245 (28%), Positives = 114/245 (46%)
Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
+ + G +H+ L + N +F+ G GVLGHG + VS+ + + + V+V+ S
Sbjct: 361 LSVACGTWHSALATANGKLFTFGDGAFGVLGHG--NRESVSYPKEVQSLNGLKTVKVACS 418
Query: 172 ENHAAFVLQ-SGQ---------VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
H A +++ GQ +FT GD GH + + P V +L ++
Sbjct: 419 IWHTAAIVEVMGQTATSMSSRKLFTWGDGDKNRLGHGNKETYLL-PTCVSSLIDYNFHKI 477
Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSY 280
G FT LT GHV T G HGQLG+ + D P + VG V+ IA G +
Sbjct: 478 ACGHTFTVALTTSGHVFTMGGTAHGQLGNSIS-DGKLPCLVQD-RLVGEFVEEIACGAHH 535
Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
+ +T V+++G G+N LGHG+ D+ P ++ R + HV +S G ++
Sbjct: 536 VAVLTSRSEVFTWGKGANGRLGHGDTEDKRTPTLVEALRDR--HVKSLSCGSNFTSSICI 593
Query: 341 SGYVS 345
+VS
Sbjct: 594 HKWVS 598
Score = 205 (77.2 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 61/207 (29%), Positives = 95/207 (45%)
Query: 140 GVLGHGPETTQCVSFTRIN-FPSAAHVV----QVSASENHAAFVLQSGQVFTCGDNSSFC 194
G+L G + + V + P ++VV Q+ H A V + G+VFT G+
Sbjct: 223 GILPDGTASNETVKTDVLTPRPLESNVVLDVHQIVCGVRHVALVTRQGEVFTWGEEVGGR 282
Query: 195 CGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH--GQLGHGD 252
GH I RP+LVE L V G T ++ G + + G H G LGHG
Sbjct: 283 LGH-GIQVDISRPKLVEFLALTNIDFVACGEYHTCVVSTSGDLFSWGDGIHNVGLLGHGS 341
Query: 253 TLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ 311
+ PK ++ PLE + V+ +A G + T NG +++FG G+ LGHG +
Sbjct: 342 DISHWIPKRVSGPLEGL-QVLSVACGTWHSALATANGKLFTFGDGAFGVLGHGNRESVSY 400
Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVAL 338
P+ +Q+ G+ V+V+ H A+
Sbjct: 401 PKEVQSLN--GLKTVKVACSIWHTAAI 425
Score = 184 (69.8 bits), Expect = 5.5e-11, P = 5.5e-11
Identities = 66/246 (26%), Positives = 108/246 (43%)
Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASE 172
QI G H L++ VF+ G + G LGHG + +S + + F + ++ V+ E
Sbjct: 255 QIVCGVRHVALVTRQGEVFTWGEEVGGRLGHGIQVD--ISRPKLVEFLALTNIDFVACGE 312
Query: 173 NHAAFVLQSGQVFTCGD--NSSFCCGH-RDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFT 228
H V SG +F+ GD ++ GH D + I P+ V L+G+ V G +
Sbjct: 313 YHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWI--PKRVSGPLEGLQVLSVACGTWHS 370
Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV---- 284
T G + T G G LGHG+ PK + L + V++A + A+
Sbjct: 371 ALATANGKLFTFGDGAFGVLGHGNRESVSYPKEVQSLNGL-KTVKVACSIWHTAAIVEVM 429
Query: 285 --TGNGV----VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
T + ++++G G LGHG + L P + + H +++ G VAL
Sbjct: 430 GQTATSMSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFH--KIACGHTFTVAL 487
Query: 339 DSSGYV 344
+SG+V
Sbjct: 488 TTSGHV 493
Score = 143 (55.4 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 42/163 (25%), Positives = 74/163 (45%)
Query: 182 GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 241
G+V+T G + + PR +E+ + Q+ G+ +T +G V T G
Sbjct: 217 GEVWTEGILPDGTASNETVKTDVLTPRPLESNVVLDVHQIVCGVRHVALVTRQGEVFTWG 276
Query: 242 SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG-SNF- 299
G+LGHG +D PK + L + ++ +A G + V+ +G ++S+G G N
Sbjct: 277 EEVGGRLGHGIQVDISRPKLVEFLA-LTNIDFVACGEYHTCVVSTSGDLFSWGDGIHNVG 335
Query: 300 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
LGHG P+ + +G+ V+ V+ G H ++G
Sbjct: 336 LLGHGSDISHWIPKRVSG-PLEGLQVLSVACGTWHSALATANG 377
Score = 141 (54.7 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 58/220 (26%), Positives = 97/220 (44%)
Query: 89 NWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPET 148
N + ++ S+ H++ IVE Q T +S+ +F+ G LGHG +
Sbjct: 408 NGLKTVKVACSIWHTAAIVEVMG---QTATS------MSSRKLFTWGDGDKNRLGHGNKE 458
Query: 149 TQ----CVS-FTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRP 203
T CVS NF H +++ + SG VFT G + G+ ++
Sbjct: 459 TYLLPTCVSSLIDYNF----H--KIACGHTFTVALTTSGHVFTMGGTAHGQLGNSISDGK 512
Query: 204 IFRPRLVE-ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
+ P LV+ L G +++ G + LT R V T G +G+LGHGDT D+ TP +
Sbjct: 513 L--PCLVQDRLVGEFVEEIACGAHHVAVLTSRSEVFTWGKGANGRLGHGDTEDKRTPTLV 570
Query: 263 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
L + V ++ G ++ ++ + V G+ + C G
Sbjct: 571 EALRD-RHVKSLSCGSNFTSSICIHKWVS--GADQSICSG 607
>TAIR|locus:2205794 [details] [associations]
symbol:AT1G27060 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 EMBL:BT030023 IPI:IPI00535833 RefSeq:NP_174026.1
UniGene:At.41142 UniGene:At.50938 ProteinModelPortal:A2RVN2
SMR:A2RVN2 DNASU:839595 EnsemblPlants:AT1G27060.1 GeneID:839595
KEGG:ath:AT1G27060 TAIR:At1g27060 HOGENOM:HOG000236375
InParanoid:A2RVN2 OMA:GYIYAWG PhylomeDB:A2RVN2
ProtClustDB:CLSN2682864 Genevestigator:A2RVN2 Uniprot:A2RVN2
Length = 386
Score = 223 (83.6 bits), Expect = 1.9e-16, P = 1.9e-16
Identities = 63/212 (29%), Positives = 93/212 (43%)
Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
V+S G+ G LG + + ++ S + ++ H + G+VFT G
Sbjct: 17 VWSWGAGTDGQLGTTKLQDELLP-QLLSLTSLPSISMLACGGAHVIALTSGGKVFTWGRG 75
Query: 191 SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH 250
SS GH D I P+LV Q AG + +GF++ G + TCG+ + GQLGH
Sbjct: 76 SSGQLGHGDILN-ITLPKLVSFFDDSVITQAAAGWSHSGFVSDSGCIFTCGNGSFGQLGH 134
Query: 251 GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL 310
GDTL TP ++ SV +A G + L + V FGSG LG +
Sbjct: 135 GDTLSLSTPAKVSHFNN-DSVKMVACGMRHSLVLFAGNQVCGFGSGKRGQLGFSSDRIKS 193
Query: 311 QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
K + VVR+SA +H A+ + G
Sbjct: 194 VNLPCVVSGLKDVEVVRISANGDHSAAISADG 225
Score = 188 (71.2 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 67/232 (28%), Positives = 101/232 (43%)
Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
+ G H + L S VF+ G G LGHG + ++F + + Q +A +H
Sbjct: 53 LACGGAHVIALTSGGKVFTWGRGSSGQLGHG-DILNITLPKLVSFFDDSVITQAAAGWSH 111
Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
+ FV SG +FTCG+ S GH DT + P V K V G+ + L
Sbjct: 112 SGFVSDSGCIFTCGNGSFGQLGHGDT-LSLSTPAKVSHFNNDSVKMVACGMRHSLVLFAG 170
Query: 235 GHVHTCGSNTHGQLGHG-DTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
V GS GQLG D + P ++ L++V VV+I+A + A++ +G +S
Sbjct: 171 NQVCGFGSGKRGQLGFSSDRIKSVNLPCVVSGLKDV-EVVRISANGDHSAAISADGQFFS 229
Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
+G G FC G + P + +FR V+ G H + L G V
Sbjct: 230 WGRG--FCGGPDVHAPQSLPSPL-SFRE-------VAVGWNHALLLTVDGEV 271
Score = 159 (61.0 bits), Expect = 7.0e-09, P = 7.0e-09
Identities = 61/207 (29%), Positives = 93/207 (44%)
Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASEN 173
+ G H+L L + + V GS G LG + + V+ + + VV++SA+ +
Sbjct: 157 VACGMRHSLVLFAGNQVCGFGSGKRGQLGFSSDRIKSVNLPCVVSGLKDVEVVRISANGD 216
Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
H+A + GQ F+ G FC G D + P P + ++V G N LT+
Sbjct: 217 HSAAISADGQFFSWG--RGFC-GGPDVHAPQSLP------SPLSFREVAVGWNHALLLTV 267
Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV----G-SVVQIAAGPSYMLAVTGNG 288
G V GS + Q + S A E+V G V+QIAAG + AVT NG
Sbjct: 268 DGEVFKLGSTLNKQ---PEKQQLQIDSSEALFEKVPDFDGVKVMQIAAGAEHSAAVTENG 324
Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAI 315
V ++G G + LG G +D+ P +
Sbjct: 325 EVKTWGWGEHGQLGLGNTNDQTSPELV 351
Score = 142 (55.0 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 59/238 (24%), Positives = 106/238 (44%)
Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
Q G H+ +S+S +F+CG+ G LGHG +T + +++ + V V+
Sbjct: 104 QAAAGWSHSGFVSDSGCIFTCGNGSFGQLGHG-DTLSLSTPAKVSHFNNDSVKMVACGMR 162
Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHR-DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
H+ + QV G G D + + P +V LK V +++A + + ++
Sbjct: 163 HSLVLFAGNQVCGFGSGKRGQLGFSSDRIKSVNLPCVVSGLKDVEVVRISANGDHSAAIS 222
Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
G + G G G D P+S+ +PL S ++A G ++ L +T +G V+
Sbjct: 223 ADGQFFSWG---RGFCGGPDV---HAPQSLPSPL----SFREVAVGWNHALLLTVDGEVF 272
Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRK-----GIHVVRVSAGDEHVVALDSSGYV 344
GS L + +LQ + + K G+ V++++AG EH A+ +G V
Sbjct: 273 KLGS----TLNKQPEKQQLQIDSSEALFEKVPDFDGVKVMQIAAGAEHSAAVTENGEV 326
Score = 132 (51.5 bits), Expect = 8.0e-06, P = 8.0e-06
Identities = 48/178 (26%), Positives = 77/178 (43%)
Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
++I+ H+ IS + FS G CG GP+ S PS +V+
Sbjct: 209 VRISANGDHSAAISADGQFFSWGRGFCG----GPDVHAPQSL-----PSPLSFREVAVGW 259
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHR----DTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
NHA + G+VF G + + D++ +F V GV Q+ AG +
Sbjct: 260 NHALLLTVDGEVFKLGSTLNKQPEKQQLQIDSSEALFEK--VPDFDGVKVMQIAAGAEHS 317
Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK--SIAPLEEVGSVVQIAAGPSYMLAV 284
+T G V T G HGQLG G+T D+ +P+ S+ ++ +++ G + AV
Sbjct: 318 AAVTENGEVKTWGWGEHGQLGLGNTNDQTSPELVSLGSIDLRTKEIKVYCGSGFTYAV 375
>TAIR|locus:2009739 [details] [associations]
symbol:AT1G65920 species:3702 "Arabidopsis thaliana"
[GO:0005543 "phospholipid binding" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=ISM] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005773 "vacuole" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] InterPro:IPR000306
InterPro:IPR001849 Pfam:PF01363 SMART:SM00064 SMART:SM00233
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0005773 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0046872 EMBL:AC009513
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184 InterPro:IPR013591
Pfam:PF08381 PROSITE:PS51514 HSSP:Q15075 HOGENOM:HOG000240974
IPI:IPI00526779 PIR:E96683 RefSeq:NP_176767.1 UniGene:At.35824
ProteinModelPortal:Q9SRZ7 SMR:Q9SRZ7 PaxDb:Q9SRZ7 PRIDE:Q9SRZ7
EnsemblPlants:AT1G65920.1 GeneID:842904 KEGG:ath:AT1G65920
TAIR:At1g65920 InParanoid:Q9SRZ7 OMA:AQADSWF PhylomeDB:Q9SRZ7
ProtClustDB:CLSN2679687 Genevestigator:Q9SRZ7 Uniprot:Q9SRZ7
Length = 1006
Score = 230 (86.0 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 81/282 (28%), Positives = 131/282 (46%)
Query: 49 YPQKFRSLVDLAA-SQLCALHSIYAGMSRNVQIELLNRCNGNWKRV-LRFLQSVEHSSDI 106
+P++ SL D+A S C+ H A ++ + ++ L G ++ +FL SD+
Sbjct: 334 HPKRVESLEDVAVRSVACSDHQTCA-VTESGELYLWGIDGGTIEQSGSQFL--TRKISDV 390
Query: 107 VETSAGNMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGP-ETT----QCVSFTRINFP 160
+ S + + G +HT ++++S +F+ GS GVLGHG E+ + S R+
Sbjct: 391 LGGSLTVLSVACGAWHTAIVTSSGQLFTYGSGTFGVLGHGSLESVTKPKEVESLRRMKVI 450
Query: 161 SAA----HVVQVSASENHAAF--VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK 214
S + H + + N F G++FT GD GH D+ R + P V L
Sbjct: 451 SVSCGPWHTAAIVETANDRKFYNAKSCGKLFTWGDGDKGRLGHADSKRKLV-PTCVTELI 509
Query: 215 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 274
+V+ G T L+I G V+T GS+ HGQLG D+ + L V I
Sbjct: 510 DHDFIKVSCGWTLTVALSISGTVYTMGSSIHGQLGCPRAKDKSVNVVLGNLTRQ-FVKDI 568
Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
A+G ++ +T G VY++G G N LG G+ D P ++
Sbjct: 569 ASGSHHVAVLTSFGNVYTWGKGMNGQLGLGDVRDRNSPVLVE 610
Score = 167 (63.8 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 51/179 (28%), Positives = 90/179 (50%)
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
V +S HAA V + G+VF G+ +S G + N I P+ VE+L+ V + V
Sbjct: 294 VQSISLGAKHAALVTRQGEVFCWGNGNSGKLGLK-VNIDIDHPKRVESLEDVAVRSVACS 352
Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEV--GS--VVQIAAGPS 279
+ T +T G ++ G + G T+++ + + + +V GS V+ +A G
Sbjct: 353 DHQTCAVTESGELYLWGID-------GGTIEQSGSQFLTRKISDVLGGSLTVLSVACGAW 405
Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
+ VT +G ++++GSG+ LGHG +P+ +++ RR + V+ VS G H A+
Sbjct: 406 HTAIVTSSGQLFTYGSGTFGVLGHGSLESVTKPKEVESLRR--MKVISVSCGPWHTAAI 462
Score = 144 (55.7 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 50/192 (26%), Positives = 85/192 (44%)
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
V+ V+ H A V SGQ+FT G + GH + +P+ VE+L+ + V+ G
Sbjct: 397 VLSVACGAWHTAIVTSSGQLFTYGSGTFGVLGHGSLES-VTKPKEVESLRRMKVISVSCG 455
Query: 225 ----------LNFTGFLTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
N F + G + T G G+LGH D+ + P + L + +
Sbjct: 456 PWHTAAIVETANDRKFYNAKSCGKLFTWGDGDKGRLGHADSKRKLVPTCVTELID-HDFI 514
Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
+++ G + +A++ +G VY+ GS + LG D+ + R+ V +++G
Sbjct: 515 KVSCGWTLTVALSISGTVYTMGSSIHGQLGCPRAKDKSVNVVLGNLTRQ--FVKDIASGS 572
Query: 333 EHVVALDSSGYV 344
HV L S G V
Sbjct: 573 HHVAVLTSFGNV 584
>UNIPROTKB|F1N7C1 [details] [associations]
symbol:HERC6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
OMA:HIFAGTY EMBL:DAAA02017014 IPI:IPI00825680 UniGene:Bt.42179
Ensembl:ENSBTAT00000027362 NextBio:20874614 Uniprot:F1N7C1
Length = 1016
Score = 230 (86.0 bits), Expect = 2.4e-16, P = 2.4e-16
Identities = 71/236 (30%), Positives = 122/236 (51%)
Query: 116 ITTGRYHTLLISNSS-VFSCGSSLCGVLGHGP--ETTQCVSFTRINFPSAAHVVQVSASE 172
++ G+ H+L + + VF+ G++ G LG G ETT +I + ++QV+
Sbjct: 80 VSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPK--KIKTLAGIKIIQVACGH 137
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
H+ + + GQVF+ G NS G P+ V +L+G+P QV AG + + L+
Sbjct: 138 YHSVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALS 197
Query: 233 IRGHVHTCGSNTHGQL---GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
+ G GSN+ GQL G+ + R P SI L+ +G VV I+ G + +T +G
Sbjct: 198 LSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLG-VVSISCGYKHTAVLTQDGK 256
Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYV 344
V++FG S LGH ++ P+ ++ R +G+ V ++ G +H +A + ++G V
Sbjct: 257 VFTFGDNSYGQLGHDPTAEKRGPQLVE--RIEGL-VSQIDCGSDHTLAYIYTTGQV 309
Score = 229 (85.7 bits), Expect = 3.1e-16, P = 3.1e-16
Identities = 65/196 (33%), Positives = 98/196 (50%)
Query: 107 VETSAGN--MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA 163
++T AG +Q+ G YH++ +S + VFS G++ G LG G E S R+
Sbjct: 122 IKTLAGIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGI 181
Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPI--FRPRLVEALKGVPCKQV 221
+ QV+A +H+ + SG F G NS+ N P+ ++P + ALK + +
Sbjct: 182 PLAQVAAGGHHSFALSLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSI 241
Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
+ G T LT G V T G N++GQLGH T ++ P+ + +E G V QI G +
Sbjct: 242 SCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKRGPQLVERIE--GLVSQIDCGSDHT 299
Query: 282 LA-VTGNGVVYSFGSG 296
LA + G V SFG G
Sbjct: 300 LAYIYTTGQVVSFGRG 315
Score = 229 (85.7 bits), Expect = 3.1e-16, P = 3.1e-16
Identities = 72/242 (29%), Positives = 115/242 (47%)
Query: 110 SAGN--MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV 166
+ GN +Q +G +H+LL+ S+ +V SCG + G LG T + RI +V
Sbjct: 20 AGGNTLLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGR-KGTPRGEQPERIPALETLNVA 78
Query: 167 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
VS + H+ V G+VF G S G + F P+ ++ L G+ QV G
Sbjct: 79 LVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHY 138
Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
+ L+ G V + G+N+HGQLG G + +P+ + LE + + Q+AAG + A++
Sbjct: 139 HSVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGHHSFALS 197
Query: 286 GNGVVYSFGSGS--NFCL-GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
+G + +GS S L G+ +P +I + G VV +S G +H L G
Sbjct: 198 LSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLG--VVSISCGYKHTAVLTQDG 255
Query: 343 YV 344
V
Sbjct: 256 KV 257
>RGD|1310971 [details] [associations]
symbol:Herc4 "HECT and RLD domain containing E3 ubiquitin
protein ligase 4" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;IBA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=IBA]
[GO:0005737 "cytoplasm" evidence=IBA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA;ISO;ISS]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=IBA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 UniPathway:UPA00143 RGD:1310971
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829 GO:GO:0005634
GO:GO:0005737 GO:GO:0030154 GO:GO:0007283 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
SUPFAM:SSF56204 eggNOG:COG5021 GeneTree:ENSGT00660000095216
HOGENOM:HOG000208452 HOVERGEN:HBG050878 HSSP:Q9UEP9 CTD:26091
KO:K10615 OMA:KLVIQPT OrthoDB:EOG44XJG1 EMBL:BC087104
IPI:IPI00360837 RefSeq:NP_001012074.1 UniGene:Rn.18143
ProteinModelPortal:Q5PQN1 PhosphoSite:Q5PQN1 PRIDE:Q5PQN1
Ensembl:ENSRNOT00000051367 GeneID:309758 KEGG:rno:309758
UCSC:RGD:1310971 InParanoid:Q5PQN1 NextBio:661276
ArrayExpress:Q5PQN1 Genevestigator:Q5PQN1 Uniprot:Q5PQN1
Length = 1057
Score = 230 (86.0 bits), Expect = 2.5e-16, P = 2.5e-16
Identities = 68/206 (33%), Positives = 99/206 (48%)
Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
+Q+ G YH+L +S +S VF G + G LG G E + S I +QV+A
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGG 199
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
H+ + SG +F G N G D N + P L+++L+ + G + T LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
G V T G+ +GQLGH T P+ + E +GS+V QIA G + A V +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316
Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
YSFG G N LG G + P ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 213 (80.0 bits), Expect = 2.7e-14, P = 2.7e-14
Identities = 62/228 (27%), Positives = 108/228 (47%)
Query: 119 GRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 177
G HT+ + + +V++CG + G LGH + ++ A ++V VS E H
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLA 98
Query: 178 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
+ GQV+ G +S G + + I PR +++L + QV G + L+ V
Sbjct: 99 LNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEV 158
Query: 238 HTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
G N +GQLG G + T P+ I L + +Q+AAG ++ +T +G ++ +G
Sbjct: 159 FCWGQNKYGQLGLGIECQKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRN 217
Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
LG +++D P +++ R + I V + G++H AL G V
Sbjct: 218 KFGQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGV 263
Score = 180 (68.4 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 64/213 (30%), Positives = 96/213 (45%)
Query: 135 GSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
G++ G LG G + V R +F V V H FVL G V+TCG N
Sbjct: 5 GNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64
Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGD 252
GH + + +P V AL V+ G T L +G V+ G ++ GQLG G
Sbjct: 65 QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGS 121
Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
P++I L ++ +VQ+A G + LA++ V+ +G LG G E +
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTS 180
Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
P+ I++ GI ++V+AG H L SG +
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAI 211
Score = 161 (61.7 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 57/219 (26%), Positives = 100/219 (45%)
Query: 50 PQKFRSLVDLAASQL-CAL-HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIV 107
P+ +SL D+ Q+ C HS+ +S+ ++ + N + L + S ++
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSL--ALSKASEVFCWGQ-NKYGQLGLGIECQKQTSPQLI 184
Query: 108 ETSAGN--MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH 164
++ G MQ+ G H+ +++ S ++F G + G LG E + V + +
Sbjct: 185 KSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVP-NLLKSLRSQK 243
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
+V + E+H A + + G VFT G GH T+ I PR V L G Q+ G
Sbjct: 244 IVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKVFELMGSIVTQIACG 302
Query: 225 LNFTG-FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
T F+ G +++ G +GQLG G T +R +P ++
Sbjct: 303 RQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
>UNIPROTKB|O95199 [details] [associations]
symbol:RCBTB2 "RCC1 and BTB domain-containing protein 2"
species:9606 "Homo sapiens" [GO:0005087 "Ran guanyl-nucleotide
exchange factor activity" evidence=TAS] InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CH471075 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
HOVERGEN:HBG053261 KO:K11494 EMBL:AF060219 EMBL:AY341245
EMBL:AK315703 EMBL:AL157813 EMBL:BC029052 IPI:IPI00658195
IPI:IPI00941277 PIR:T50663 RefSeq:NP_001259.1 UniGene:Hs.652712
ProteinModelPortal:O95199 SMR:O95199 IntAct:O95199
MINT:MINT-1481780 STRING:O95199 PhosphoSite:O95199 PRIDE:O95199
DNASU:1102 Ensembl:ENST00000344532 GeneID:1102 KEGG:hsa:1102
UCSC:uc001vch.3 CTD:1102 GeneCards:GC13M049063 HGNC:HGNC:1914
HPA:HPA040242 MIM:603524 neXtProt:NX_O95199 PharmGKB:PA26450
InParanoid:O95199 OrthoDB:EOG4M91R6 PhylomeDB:O95199 ChiTaRS:RCBTB2
GenomeRNAi:1102 NextBio:4558 ArrayExpress:O95199 Bgee:O95199
CleanEx:HS_RCBTB2 Genevestigator:O95199 GermOnline:ENSG00000136161
Uniprot:O95199
Length = 551
Score = 223 (83.6 bits), Expect = 5.8e-16, P = 5.8e-16
Identities = 70/236 (29%), Positives = 103/236 (43%)
Query: 110 SAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
SAGN + Y T+ N +F G++ CG LG G + + R++ + + +S
Sbjct: 53 SAGNEVL----YTTV---NDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLNGKKIACLS 104
Query: 170 -ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
S H G+VFT G N+ G+ TN + + L +V G +
Sbjct: 105 YGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHS 164
Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
LT G V G N GQ+G G T+++P P+ + + VV IA G +AV G
Sbjct: 165 LVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTG 224
Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
VY +G N LG G + QP + +GI V RV+ G H + L G V
Sbjct: 225 EVYVWGYNGNGQLGLGNSGN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQV 278
Score = 192 (72.6 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 60/226 (26%), Positives = 104/226 (46%)
Query: 118 TGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 177
+G + L + VF+ G + LG+G V S V++V+ H+
Sbjct: 107 SGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLV 166
Query: 178 VLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
+ G+VF G N+S G T N+PI R R+ L+ + G + G
Sbjct: 167 LTSDGEVFAWGYNNSGQVGSGSTVNQPIPR-RVTGCLQNKVVVTIACGQMCCMAVVDTGE 225
Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
V+ G N +GQLG G++ ++PTP +A L+ + V ++A G ++ L +T G VY++G+
Sbjct: 226 VYVWGYNGNGQLGLGNSGNQPTPCRVAALQGI-RVQRVACGYAHTLVLTDEGQVYAWGAN 284
Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
S LG G + ++ P + + + I + + H A + G
Sbjct: 285 SYGQLGTGNKSNQSYPTPVTVEKDRIIEIA--ACHSTHTSAAKTQG 328
Score = 177 (67.4 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 61/208 (29%), Positives = 101/208 (48%)
Query: 107 VETSAGNMQI---TTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA 162
+ T+ N Q+ G YH+L++ S+ VF+ G + G +G G Q +
Sbjct: 145 ISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQN 204
Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQV 221
VV ++ + V+ +G+V+ G N + G ++ N+P P V AL+G+ ++V
Sbjct: 205 KVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPT--PCRVAALQGIRVQRV 262
Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR--PTPKSIAPLEEVGSVVQIAAGPS 279
G T LT G V+ G+N++GQLG G+ ++ PTP ++ E +++IAA S
Sbjct: 263 ACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTV----EKDRIIEIAACHS 318
Query: 280 Y--MLAVTGNGVVYSFGS--GSNFCLGH 303
A T G VY +G G + L H
Sbjct: 319 THTSAAKTQGGHVYMWGQCRGQSVILPH 346
>ZFIN|ZDB-GENE-090311-7 [details] [associations]
symbol:si:ch211-281g13.5 "si:ch211-281g13.5"
species:7955 "Danio rerio" [GO:0006464 "cellular protein
modification process" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-090311-7 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
eggNOG:COG5021 HOGENOM:HOG000208452 HOVERGEN:HBG050878
GeneTree:ENSGT00700000104312 EMBL:BX321880 IPI:IPI00899041
RefSeq:NP_001139103.1 UniGene:Dr.155114 Ensembl:ENSDART00000113315
GeneID:100148091 OMA:TLAWFPS NextBio:20791722 Uniprot:B8A4S7
Length = 992
Score = 226 (84.6 bits), Expect = 7.0e-16, P = 7.0e-16
Identities = 58/178 (32%), Positives = 89/178 (50%)
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
V+Q++ + H+ + GQ+F G+N+ G R P+ +++L +P Q++AG
Sbjct: 117 VIQIACGDQHSMALSNDGQLFVWGENTHGQLGLRKEQAGTQSPQHLQSLCEIPVAQISAG 176
Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA 283
N + L++ G V GSN+ GQLG GDT DR P + L G V I+ G +
Sbjct: 177 GNHSFVLSLSGVVFGWGSNSAGQLGLGDTKDRFVPTIVKSL--CGKKTVSISCGGEHTAT 234
Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
++ G V++FGSG LGH DE PR I G V +V+ G H + + S
Sbjct: 235 LSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLIAELW--GSKVSQVTCGRHHTLVFEES 290
Score = 218 (81.8 bits), Expect = 6.3e-15, P = 6.3e-15
Identities = 72/203 (35%), Positives = 97/203 (47%)
Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
+QI G H++ +SN +F G + G LG E S + V Q+SA
Sbjct: 118 IQIACGDQHSMALSNDGQLFVWGENTHGQLGLRKEQAGTQSPQHLQSLCEIPVAQISAGG 177
Query: 173 NHAAFVLQ-SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
NH+ FVL SG VF G NS+ G DT + F P +V++L G ++ G T L
Sbjct: 178 NHS-FVLSLSGVVFGWGSNSAGQLGLGDT-KDRFVPTIVKSLCGKKTVSISCGGEHTATL 235
Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLAVTGNG-V 289
+ G V T GS GQLGH D P+ IA L GS V Q+ G + L + +
Sbjct: 236 SKGGTVFTFGSGGFGQLGHNSLKDEHHPRLIAELW--GSKVSQVTCGRHHTLVFEESSKL 293
Query: 290 VYSFGSGSNFCLGHGEQHDELQP 312
+YSFG G LG+GEQ + P
Sbjct: 294 IYSFGCGMQGQLGNGEQVKQSVP 316
Score = 158 (60.7 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 58/223 (26%), Positives = 93/223 (41%)
Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV--F 185
N + C SS + G C+ F R S + A E LQ+ ++
Sbjct: 25 NWGIKFCPSSAVQDISAGKS---CIGFIREGKVSVLRLHNEDADEKLEPLQLQNERIRSI 81
Query: 186 TCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV---TAGLNFTGFLTIRGHVHTCGS 242
CG+ + + + + LK + +QV G + L+ G + G
Sbjct: 82 VCGEAGAVLLADDGKVLIMDQSTVCRPLKSLENRQVIQIACGDQHSMALSNDGQLFVWGE 141
Query: 243 NTHGQLG-HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 301
NTHGQLG + +P+ + L E+ V QI+AG ++ ++ +GVV+ +GS S L
Sbjct: 142 NTHGQLGLRKEQAGTQSPQHLQSLCEI-PVAQISAGGNHSFVLSLSGVVFGWGSNSAGQL 200
Query: 302 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
G G+ D P +++ K V +S G EH L G V
Sbjct: 201 GLGDTKDRFVPTIVKSLCGK--KTVSISCGGEHTATLSKGGTV 241
>MGI|MGI:1914595 [details] [associations]
symbol:Herc4 "hect domain and RLD 4" species:10090 "Mus
musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA;TAS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=IBA] [GO:0006464 "cellular protein modification process"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IMP]
[GO:0016567 "protein ubiquitination" evidence=TAS] [GO:0016874
"ligase activity" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
UniPathway:UPA00143 MGI:MGI:1914595 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005829 GO:GO:0005634 GO:GO:0005737 GO:GO:0030154
GO:GO:0007283 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00660000095216 HOVERGEN:HBG050878 HSSP:Q9UEP9
CTD:26091 KO:K10615 EMBL:AK009436 EMBL:AK143111 EMBL:AK145735
EMBL:AK147723 EMBL:BC026855 EMBL:BC043082 EMBL:BC047157
EMBL:BC060033 IPI:IPI00453903 IPI:IPI00554980 IPI:IPI00828240
RefSeq:NP_080377.2 RefSeq:NP_084390.1 UniGene:Mm.234437
UniGene:Mm.422789 UniGene:Mm.441725 UniGene:Mm.487274
ProteinModelPortal:Q6PAV2 SMR:Q6PAV2 STRING:Q6PAV2
PhosphoSite:Q6PAV2 PaxDb:Q6PAV2 PRIDE:Q6PAV2
Ensembl:ENSMUST00000020258 GeneID:67345 KEGG:mmu:67345
UCSC:uc007fka.2 UCSC:uc007fkc.2 UCSC:uc007fkd.2 InParanoid:Q6PAV2
OMA:KLVIQPT OrthoDB:EOG44XJG1 NextBio:324318 Bgee:Q6PAV2
CleanEx:MM_HERC4 Genevestigator:Q6PAV2 Uniprot:Q6PAV2
Length = 1057
Score = 226 (84.6 bits), Expect = 7.7e-16, P = 7.7e-16
Identities = 66/206 (32%), Positives = 99/206 (48%)
Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
+Q+ G YH+L +S +S VF G + G LG G + + S I +QV+A
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGG 199
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
H+ + SG +F G N G D N + P L+++L+ + G + T LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
G V T G+ +GQLGH T P+ + E +GS+V Q+A G + A V +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHTSAFVPSSGRI 316
Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
YSFG G N LG G + P ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 212 (79.7 bits), Expect = 3.5e-14, P = 3.5e-14
Identities = 61/228 (26%), Positives = 109/228 (47%)
Query: 119 GRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 177
G HT+ + + +V++CG + G LGH + ++ A ++V V+ E H
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVACGEAHTLA 98
Query: 178 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
+ GQV+ G +S G + + I PR +++L + QV G + L+ V
Sbjct: 99 LNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEV 158
Query: 238 HTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
G N +GQLG G D + +P+ I L + +Q+AAG ++ +T +G ++ +G
Sbjct: 159 FCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRN 217
Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
LG +++D P +++ R + I V + G++H AL G V
Sbjct: 218 KFGQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGV 263
Score = 177 (67.4 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 63/213 (29%), Positives = 95/213 (44%)
Query: 135 GSSLCGVLGHGPETTQCV-SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
G++ G LG G + V R +F V V H FVL G V+TCG N
Sbjct: 5 GNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64
Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGD 252
GH + + +P V AL V G T L +G V+ G ++ GQLG G
Sbjct: 65 QLGHEKSRK---KPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGS 121
Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
P++I L ++ +VQ+A G + LA++ V+ +G LG G + +
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTS 180
Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
P+ I++ GI ++V+AG H L SG +
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAI 211
Score = 161 (61.7 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 58/219 (26%), Positives = 100/219 (45%)
Query: 50 PQKFRSLVDLAASQL-CAL-HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIV 107
P+ +SL D+ Q+ C HS+ +S+ ++ + N + L + S ++
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSL--ALSKASEVFCWGQ-NKYGQLGLGIDCQKQTSPQLI 184
Query: 108 ETSAGN--MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH 164
++ G MQ+ G H+ +++ S ++F G + G LG E + V + +
Sbjct: 185 KSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVP-NLLKSLRSQK 243
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
+V + E+H A + + G VFT G GH T+ I PR V L G QV G
Sbjct: 244 IVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKVFELMGSIVTQVACG 302
Query: 225 LNFTG-FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
T F+ G +++ G +GQLG G T +R +P ++
Sbjct: 303 RQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
>UNIPROTKB|Q5GLZ8 [details] [associations]
symbol:HERC4 "Probable E3 ubiquitin-protein ligase HERC4"
species:9606 "Homo sapiens" [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] [GO:0005634
"nucleus" evidence=IBA] [GO:0005737 "cytoplasm" evidence=IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0007283
"spermatogenesis" evidence=ISS] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 UniPathway:UPA00143
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829 GO:GO:0005634
GO:GO:0005737 GO:GO:0030154 GO:GO:0007283 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
SUPFAM:SSF56204 eggNOG:COG5021 HOGENOM:HOG000208452
HOVERGEN:HBG050878 EMBL:AY221963 EMBL:AY650032 EMBL:AY650033
EMBL:AY650034 EMBL:AB046813 EMBL:AL356741 EMBL:AC024258
EMBL:AL133551 EMBL:BC039600 IPI:IPI00333067 IPI:IPI00552050
IPI:IPI00604497 IPI:IPI00827523 IPI:IPI00827948 IPI:IPI00827992
RefSeq:NP_056416.2 RefSeq:NP_071362.1 UniGene:Hs.51891 HSSP:Q9UEP9
ProteinModelPortal:Q5GLZ8 SMR:Q5GLZ8 IntAct:Q5GLZ8 STRING:Q5GLZ8
PhosphoSite:Q5GLZ8 DMDM:74707832 PaxDb:Q5GLZ8 PRIDE:Q5GLZ8
DNASU:26091 Ensembl:ENST00000277817 Ensembl:ENST00000373700
Ensembl:ENST00000395187 Ensembl:ENST00000395198
Ensembl:ENST00000412272 Ensembl:ENST00000473533
Ensembl:ENST00000492996 GeneID:26091 KEGG:hsa:26091 UCSC:uc001jng.4
UCSC:uc001jnh.4 UCSC:uc001jnk.3 UCSC:uc009xpr.3 CTD:26091
GeneCards:GC10M069681 HGNC:HGNC:24521 HPA:HPA045453 MIM:609248
neXtProt:NX_Q5GLZ8 PharmGKB:PA134949021 InParanoid:Q5GLZ8 KO:K10615
ChiTaRS:HERC4 GenomeRNAi:26091 NextBio:48027 ArrayExpress:Q5GLZ8
Bgee:Q5GLZ8 CleanEx:HS_HERC4 Genevestigator:Q5GLZ8 Uniprot:Q5GLZ8
Length = 1057
Score = 225 (84.3 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 75/251 (29%), Positives = 121/251 (48%)
Query: 70 IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
+YA G+ + Q+ L+ G+ + +R ++++ SDI +Q+ G YH+L +S
Sbjct: 105 VYAWGLDSDGQLGLV----GS-EECIRVPRNIKSLSDIQI-----VQVACGYYHSLALSK 154
Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
+S VF G + G LG G + + S + +QV+A H+ + SG +F
Sbjct: 155 ASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW 214
Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
G N G D N + P L+++L+ + G + T LT G V T G+ +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
LGH T P+ + E +GS+V +IA G + A V +G +YSFG G N LG G
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331
Query: 306 QHDELQPRAIQ 316
+ P ++
Sbjct: 332 TSNRKSPFTVK 342
Score = 209 (78.6 bits), Expect = 7.8e-14, P = 7.8e-14
Identities = 61/228 (26%), Positives = 108/228 (47%)
Query: 119 GRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 177
G HT+ + + +V++CG + G LGH + ++ A ++V VS E H
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLA 98
Query: 178 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
+ GQV+ G +S G + I PR +++L + QV G + L+ V
Sbjct: 99 LNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEV 158
Query: 238 HTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
G N +GQLG G D + +P+ + L + +Q+AAG ++ +T +G ++ +G
Sbjct: 159 FCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRN 217
Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
LG +++D P +++ R + I V + G++H AL G V
Sbjct: 218 KFGQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGV 263
Score = 172 (65.6 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 62/213 (29%), Positives = 95/213 (44%)
Query: 135 GSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
G++ G LG G + V R +F V V H FVL G V+TCG N
Sbjct: 5 GNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64
Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
GH + + +P V AL V+ G T L +G V+ G ++ GQLG G
Sbjct: 65 QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGS 121
Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
P++I L ++ +VQ+A G + LA++ V+ +G LG G +
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180
Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
P+ +++ GI ++V+AG H L SG +
Sbjct: 181 PQLLKSLL--GIPFMQVAAGGAHSFVLTLSGAI 211
Score = 156 (60.0 bits), Expect = 7.5e-08, P = 7.5e-08
Identities = 50/161 (31%), Positives = 78/161 (48%)
Query: 187 CGDNSSFC-CGHRDTNRPI-FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
C N+SF G + I PR + + V GL T F+ G V+TCG N
Sbjct: 3 CWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCND 62
Query: 245 HGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH- 303
GQLGH + R P+ + L+ ++V ++ G ++ LA+ G VY++G S+ LG
Sbjct: 63 LGQLGHEKS--RKKPEQVVALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLV 119
Query: 304 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
G + PR I++ I +V+V+ G H +AL + V
Sbjct: 120 GSEECIRVPRNIKSL--SDIQIVQVACGYYHSLALSKASEV 158
>FB|FBgn0031769 [details] [associations]
symbol:CG9135 species:7227 "Drosophila melanogaster"
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
[GO:0005875 "microtubule associated complex" evidence=IDA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005875 EMBL:AE014134
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GeneTree:ENSGT00700000104160 OMA:FGENKLG EMBL:AY058682
EMBL:AM294309 EMBL:AM294310 EMBL:AM294311 EMBL:AM294312
EMBL:AM294313 EMBL:AM294314 EMBL:AM294315 EMBL:AM294316
EMBL:AM294317 EMBL:AM294318 EMBL:FM245376 EMBL:FM245377
EMBL:FM245378 EMBL:FM245379 EMBL:FM245380 EMBL:FM245381
EMBL:FM245382 EMBL:FM245383 EMBL:FM245384 EMBL:FM245385
EMBL:FM245386 EMBL:FM245387 RefSeq:NP_608985.1 RefSeq:NP_723150.1
UniGene:Dm.4234 HSSP:P18754 SMR:Q9VMI5 IntAct:Q9VMI5
MINT:MINT-744911 STRING:Q9VMI5 EnsemblMetazoa:FBtr0079185
EnsemblMetazoa:FBtr0079186 GeneID:33850 KEGG:dme:Dmel_CG9135
UCSC:CG9135-RA FlyBase:FBgn0031769 InParanoid:Q9VMI5
OrthoDB:EOG4QV9T7 ChiTaRS:CG9135 GenomeRNAi:33850 NextBio:785598
Uniprot:Q9VMI5
Length = 487
Score = 170 (64.9 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 40/130 (30%), Positives = 64/130 (49%)
Query: 122 HTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
HT+LI+ + G + G LG + T I ++VQ + +H F+
Sbjct: 127 HTILINMDRKALGFGRNPSGQLGLSQDIKLAEKPTIIPALEQLNIVQAAVGRHHTLFLTD 186
Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
+G V+ CG+N S CG +T+ I+ P + +G P ++ G F+ L I+G +HT
Sbjct: 187 TGTVYACGENKSGQCGVGNTHANIYSPTPIN-YRGPPIIRIGCGAEFSVILDIKGSLHTF 245
Query: 241 GSNTHGQLGH 250
G +GQLGH
Sbjct: 246 GLPEYGQLGH 255
Score = 120 (47.3 bits), Expect = 0.00025, P = 0.00025
Identities = 40/145 (27%), Positives = 62/145 (42%)
Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 219
PSAAH + ++ F G N S G + +P ++ AL+ +
Sbjct: 123 PSAAHTILINMDRKALGF----------GRNPSGQLGLSQDIKLAEKPTIIPALEQLNIV 172
Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGP 278
Q G + T FLT G V+ CG N GQ G G+T S P+ G +++I G
Sbjct: 173 QAAVGRHHTLFLTDTGTVYACGENKSGQCGVGNT--HANIYSPTPINYRGPPIIRIGCGA 230
Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGH 303
+ + + G +++FG LGH
Sbjct: 231 EFSVILDIKGSLHTFGLPEYGQLGH 255
Score = 95 (38.5 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 21/61 (34%), Positives = 34/61 (55%)
Query: 262 IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 321
+ P++ V +V A G ++ +A+ VYS+G G LGH E DE+ PR ++ F +
Sbjct: 291 VTPVDGV-QIVDFACGNNHTVAIDSKKRVYSWGFGGFGRLGHAEPKDEMVPRLMKFFDTQ 349
Query: 322 G 322
G
Sbjct: 350 G 350
Score = 80 (33.2 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 38/185 (20%), Positives = 77/185 (41%)
Query: 7 LFSIEELPSHLIFEILTSGRLSAV-DLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLC 65
L ++E+ P ++ + + L+ D ++ H +K+R + AS
Sbjct: 69 LATLEKTPGQMLIAGMVTWDLTGKRDRKNVTKVRPNLYSFHRFTEEKYRYV----ASGPS 124
Query: 66 ALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNM-QITTGRYHTL 124
A H+I M R + +G + + ++ E + I N+ Q GR+HTL
Sbjct: 125 AAHTILINMDRKA-LGFGRNPSGQLG-LSQDIKLAEKPTIIPALEQLNIVQAAVGRHHTL 182
Query: 125 LISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 183
++++ +V++CG + G G G S T IN+ ++++ + + G
Sbjct: 183 FLTDTGTVYACGENKSGQCGVGNTHANIYSPTPINYRGPP-IIRIGCGAEFSVILDIKGS 241
Query: 184 VFTCG 188
+ T G
Sbjct: 242 LHTFG 246
>MGI|MGI:1351630 [details] [associations]
symbol:Sergef "secretion regulating guanine nucleotide
exchange factor" species:10090 "Mus musculus" [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0005087 "Ran guanyl-nucleotide exchange factor activity"
evidence=ISA] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0050709 "negative regulation of
protein secretion" evidence=ISO] [GO:0050790 "regulation of
catalytic activity" evidence=ISA] InterPro:IPR027048
MGI:MGI:1351630 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0005730 GO:GO:0045111 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0050709
eggNOG:COG5184 GeneTree:ENSGT00700000104160 CTD:26297
HOGENOM:HOG000154414 HOVERGEN:HBG051746 KO:K15421 OMA:NIWAPKP
OrthoDB:EOG4J1183 PANTHER:PTHR22870:SF7 EMBL:AJ243952 EMBL:AK145819
EMBL:AK147848 EMBL:BC049603 EMBL:BC119533 EMBL:BC119534
IPI:IPI00134816 RefSeq:NP_038817.1 UniGene:Mm.76659
ProteinModelPortal:Q80YD6 SMR:Q80YD6 STRING:Q80YD6 PRIDE:Q80YD6
Ensembl:ENSMUST00000033127 GeneID:27414 KEGG:mmu:27414
UCSC:uc009gyp.2 InParanoid:Q80YD6 NextBio:305446 Bgee:Q80YD6
Genevestigator:Q80YD6 GermOnline:ENSMUSG00000030839 Uniprot:Q80YD6
Length = 464
Score = 217 (81.4 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 74/228 (32%), Positives = 107/228 (46%)
Query: 126 ISNSSV-FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
+S ++V F+ G++ G LG G + + +F A + V+ H+A V G +
Sbjct: 11 VSAAAVLFAWGANSYGQLGLGHKEDVFLPQQLSDFCQAGCIKSVTGGGGHSAVVTDGGDL 70
Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
F CG N G T + R + + L+G P +QV G +FT LT +G V +CGSN
Sbjct: 71 FVCGLNKDGQLGLGHTEE-VLRFTICKPLRGCPIRQVACGWDFTIMLTEKGQVLSCGSNA 129
Query: 245 HGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG-----SGS 297
GQLG HG P++I L E VV +AAG + LA T G V+ +G SG
Sbjct: 130 FGQLGVPHGPR-KCVVPQAIECLRE--KVVCVAAGLRHALATTATGSVFQWGTGLASSGR 186
Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIH---VVRVSAGDEHVVALDSSG 342
C G Q+ L A + R G+ V AG +H +L +G
Sbjct: 187 RLCPG---QNLPLFLTAKEPSRVTGLENSTAVCAVAGSDHSASLTDTG 231
Score = 150 (57.9 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 61/208 (29%), Positives = 90/208 (43%)
Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLG--HGPETTQCVSFTRINFPSAAHVVQVSAS 171
Q+ G T++++ V SCGS+ G LG HGP +CV I VV V+A
Sbjct: 105 QVACGWDFTIMLTEKGQVLSCGSNAFGQLGVPHGPR--KCVVPQAIEC-LREKVVCVAAG 161
Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHR---DTNRPIF----RPRLVEALKGVPCKQVTAG 224
HA +G VF G + G R N P+F P V L+ AG
Sbjct: 162 LRHALATTATGSVFQWGTGLA-SSGRRLCPGQNLPLFLTAKEPSRVTGLENSTAVCAVAG 220
Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYMLA 283
+ + LT G ++ G N HGQL + P P+ I A + V + +G ++++A
Sbjct: 221 SDHSASLTDTGELYVWGRNKHGQLA-SRAVFLPLPQRIEAHYFQDEKVTAVWSGWTHLVA 279
Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQ 311
T G V+++G LG + E Q
Sbjct: 280 KTETGKVFTWGRADYGQLGRRLEPPEAQ 307
Score = 145 (56.1 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 57/181 (31%), Positives = 84/181 (46%)
Query: 170 ASENHAAFVLQSGQV-FTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPC-KQVTAGL 225
A E+ A+ + + V F G NS GH++ +F P+ + C K VT G
Sbjct: 2 ARESCASETVSAAAVLFAWGANSYGQLGLGHKED---VFLPQQLSDFCQAGCIKSVTGGG 58
Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
+ +T G + CG N GQLG G T + PL + Q+A G + + +T
Sbjct: 59 GHSAVVTDGGDLFVCGLNKDGQLGLGHTEEVLRFTICKPLRGC-PIRQVACGWDFTIMLT 117
Query: 286 GNGVVYSFGSGSNFCLG--HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
G V S GS + LG HG + + P+AI+ R K VV V+AG H +A ++G
Sbjct: 118 EKGQVLSCGSNAFGQLGVPHGPRKCVV-PQAIECLREK---VVCVAAGLRHALATTATGS 173
Query: 344 V 344
V
Sbjct: 174 V 174
Score = 134 (52.2 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 62/238 (26%), Positives = 100/238 (42%)
Query: 116 ITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
+T G H+ ++++ +F CG + G LG G T + + FT + QV+ +
Sbjct: 54 VTGGGGHSAVVTDGGDLFVCGLNKDGQLGLG-HTEEVLRFTICKPLRGCPIRQVACGWDF 112
Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG-VPCKQVTAGLNFTGFLTI 233
+ + GQV +CG N+ G R P+ +E L+ V C V AGL T
Sbjct: 113 TIMLTEKGQVLSCGSNAFGQLGVPHGPRKCVVPQAIECLREKVVC--VAAGLRHALATTA 170
Query: 234 RGHVHTCGSN--THGQ-LGHGDTLD----RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
G V G+ + G+ L G L P + LE +V +A G + ++T
Sbjct: 171 TGSVFQWGTGLASSGRRLCPGQNLPLFLTAKEPSRVTGLENSTAVCAVA-GSDHSASLTD 229
Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
G +Y +G + L L P+ I+ + V V +G H+VA +G V
Sbjct: 230 TGELYVWGRNKHGQLASRAVFLPL-PQRIEAHYFQDEKVTAVWSGWTHLVAKTETGKV 286
>ZFIN|ZDB-GENE-081015-2 [details] [associations]
symbol:rpgrb "retinitis pigmentosa GTPase regulator
b" species:7955 "Danio rerio" [GO:0060287 "epithelial cilium
movement involved in determination of left/right asymmetry"
evidence=IMP] [GO:0060271 "cilium morphogenesis" evidence=IMP]
[GO:0010842 "retina layer formation" evidence=IMP] [GO:0060041
"retina development in camera-type eye" evidence=IMP] [GO:0007018
"microtubule-based movement" evidence=IMP] INTERPRO:IPR000408
Pfam:PF00415 ZFIN:ZDB-GENE-081015-2 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0010842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0060271 GO:GO:0060287
GeneTree:ENSGT00700000104160 EMBL:CR450831 IPI:IPI00798788
RefSeq:XP_685964.5 UniGene:Dr.100975 Ensembl:ENSDART00000088624
GeneID:557752 KEGG:dre:557752 CTD:557752 NextBio:20882140
Bgee:F1QM29 Uniprot:F1QM29
Length = 1413
Score = 222 (83.2 bits), Expect = 3.5e-15, P = 3.5e-15
Identities = 76/264 (28%), Positives = 130/264 (49%)
Query: 87 NGNWKRV-LRFLQSVEHSSDIVETSAGNMQITT-GRYHTLLI-SNSSVFSCGSSLCGVLG 143
+ NW ++ L +V + + + +++T GR HTL+ S ++++CG + G LG
Sbjct: 62 SNNWGQLGLGTKTTVNKPTCVKALKSERVKLTACGRTHTLVFTSRGNLYACGGNNEGQLG 121
Query: 144 HGPETTQCVSFTRINF-PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCG-HRDTN 201
G + SF + F + ++A N +A + Q G+++ GDNS G +++N
Sbjct: 122 LG-DCNDRTSFHLVEFFNKQGPIKMLAAGSNTSAALTQDGRLYMWGDNSEGQIGLGKESN 180
Query: 202 RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTL-DRPTP 259
P+ V K V V+ G + F+T+ G ++T G G+LG + L + P
Sbjct: 181 A--LTPQEVSVGKRV--FWVSCGYYHSAFVTVDGALYTFGEKDSGKLGLSTEKLANHKVP 236
Query: 260 KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTF 318
+ + + + VVQ+A G + +A+T N V YSFG G LGHG E + PR ++ F
Sbjct: 237 QQVTDIPD--RVVQVACGGGHTVALTENEV-YSFGLGQFGQLGHGTFIFESRLPRVVEHF 293
Query: 319 RRKGIHVVRVSAGDEHVVALDSSG 342
R KG V + G+ H + +G
Sbjct: 294 R-KG-RVKHAACGENHTALITDNG 315
Score = 209 (78.6 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 55/180 (30%), Positives = 89/180 (49%)
Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
+++S + H A V ++G++F G N+ G T + +P V+ALK K G
Sbjct: 39 LRISCGDEHTALVTENGKLFMFGSNNWGQLG-LGTKTTVNKPTCVKALKSERVKLTACGR 97
Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
T T RG+++ CG N GQLG GD DR + + + G + +AAG + A+T
Sbjct: 98 THTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQGPIKMLAAGSNTSAALT 157
Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH--VVALDSSGY 343
+G +Y +G S +G G++ + L P+ + +R V VS G H V +D + Y
Sbjct: 158 QDGRLYMWGDNSEGQIGLGKESNALTPQEVSVGKR----VFWVSCGYYHSAFVTVDGALY 213
Score = 194 (73.4 bits), Expect = 6.0e-12, P = 6.0e-12
Identities = 68/231 (29%), Positives = 106/231 (45%)
Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
++I+ G HT L++ N +F GS+ G LG G +TT T + + V +
Sbjct: 39 LRISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNKP-TCVKALKSERVKLTACGR 97
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEAL-KGVPCKQVTAGLNFTGF 230
H G ++ CG N+ G D N R F LVE K P K + AG N +
Sbjct: 98 THTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSFH--LVEFFNKQGPIKMLAAGSNTSAA 155
Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLAVTGNGV 289
LT G ++ G N+ GQ+G G + TP+ ++ VG V ++ G + VT +G
Sbjct: 156 LTQDGRLYMWGDNSEGQIGLGKESNALTPQEVS----VGKRVFWVSCGYYHSAFVTVDGA 211
Query: 290 VYSFGSGSNFCLGHGEQH--DELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
+Y+FG + LG + + P+ + + VV+V+ G H VAL
Sbjct: 212 LYTFGEKDSGKLGLSTEKLANHKVPQQVTDIPDR---VVQVACGGGHTVAL 259
Score = 171 (65.3 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 69/266 (25%), Positives = 118/266 (44%)
Query: 83 LNRCNGNWKRVLRFLQSVEHSS-DIVE--TSAGNMQITTGRYHT--LLISNSSVFSCGSS 137
L C GN + L + +S +VE G +++ +T L + ++ G +
Sbjct: 109 LYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQGPIKMLAAGSNTSAALTQDGRLYMWGDN 168
Query: 138 LCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH 197
G +G G E+ + T V VS H+AFV G ++T G+ S G
Sbjct: 169 SEGQIGLGKESN---ALTPQEVSVGKRVFWVSCGYYHSAFVTVDGALYTFGEKDSGKLG- 224
Query: 198 RDTNRPIFRPRLVEALKGVPCK--QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTL- 254
T + + ++ + + +P + QV G T LT V++ G GQLGHG +
Sbjct: 225 LSTEK-LANHKVPQQVTDIPDRVVQVACGGGHTVALT-ENEVYSFGLGQFGQLGHGTFIF 282
Query: 255 DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQP 312
+ P+ + + G V A G ++ +T NG++Y+FG G + LG GE++ ++ +P
Sbjct: 283 ESRLPRVVEHFRK-GRVKHAACGENHTALITDNGLLYTFGDGRHGKLGLGEENFTNQFKP 341
Query: 313 RAIQTFRRKGIHVVRVSAGDEHVVAL 338
F HV V+ G H++ L
Sbjct: 342 TLCPRFL--DYHVHSVTCGGCHMLVL 365
>UNIPROTKB|G3V1B4 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CH471064 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 PANTHER:PTHR22870:SF7 UniGene:Hs.32470
HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058 EMBL:AC124078
ProteinModelPortal:G3V1B4 SMR:G3V1B4 Ensembl:ENST00000525422
ArrayExpress:G3V1B4 Bgee:G3V1B4 Uniprot:G3V1B4
Length = 354
Score = 210 (79.0 bits), Expect = 5.4e-15, P = 5.4e-15
Identities = 71/226 (31%), Positives = 110/226 (48%)
Query: 129 SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
+++F+ G++ G LG G + + +F V +++ H+A V G +F CG
Sbjct: 15 AALFAWGANSYGQLGLGHKEDVLLPQQLNDFCKPRSVRRITGGGGHSAVVTDGGDLFVCG 74
Query: 189 DNSS--FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
N GH + + P F P ++L G P +QV G +FT LT G V +CGSN+ G
Sbjct: 75 LNKDGQLGLGHTE-DIPYFTP--CKSLFGCPIQQVACGWDFTIMLTENGQVLSCGSNSFG 131
Query: 247 QLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG 304
QLG HG P++I +E VV IAAG + +A T +G+V+ +G+G C G
Sbjct: 132 QLGVPHGPRRC-VVPQAIELHKE--KVVCIAAGLRHAVAATASGIVFQWGTGLASC-GRR 187
Query: 305 EQHDELQP---RAIQTFRRKGIH---VVRVSAGDEHVVALDSSGYV 344
+ P A + R G+ + V AG +H +L +G V
Sbjct: 188 LCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEV 233
Score = 174 (66.3 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 63/199 (31%), Positives = 91/199 (45%)
Query: 115 QITTGRYHTLLIS-NSSVFSCGSSLCGVLG--HGPETTQCVSFTRINFPSAAHVVQVSAS 171
Q+ G T++++ N V SCGS+ G LG HGP +CV I VV ++A
Sbjct: 105 QVACGWDFTIMLTENGQVLSCGSNSFGQLGVPHGPR--RCVVPQAIELHKEK-VVCIAAG 161
Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHR---DTNRPIF----RPRLVEALKGVPCKQVTAG 224
HA SG VF G + CG R P+F P V L+ V AG
Sbjct: 162 LRHAVAATASGIVFQWGTGLA-SCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAG 220
Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYMLA 283
+ + LT G V+ GSN HGQL + + P P+ I A + V I +G ++++A
Sbjct: 221 SDHSASLTDAGEVYVWGSNKHGQLAN-EAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVA 279
Query: 284 VTGNGVVYSFGSGSNFCLG 302
T G ++++G LG
Sbjct: 280 QTETGKMFTWGRADYGQLG 298
Score = 135 (52.6 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 63/241 (26%), Positives = 99/241 (41%)
Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
+IT G H+ ++++ +F CG + G LG G T FT + QV+ +
Sbjct: 53 RITGGGGHSAVVTDGGDLFVCGLNKDGQLGLG-HTEDIPYFTPCKSLFGCPIQQVACGWD 111
Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG-VPCKQVTAGLNFTGFLT 232
+ ++GQV +CG NS G R P+ +E K V C + AGL T
Sbjct: 112 FTIMLTENGQVLSCGSNSFGQLGVPHGPRRCVVPQAIELHKEKVVC--IAAGLRHAVAAT 169
Query: 233 IRGHVHTCGSNTHG---QLGHGDTLD----RPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
G V G+ +L G TL P + LE + + AG + ++T
Sbjct: 170 ASGIVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLEN-SKAMCVLAGSDHSASLT 228
Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQ----PRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
G VY +GS HG+ +E P+ I+ + V + +G H+VA +
Sbjct: 229 DAGEVYVWGSNK-----HGQLANEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTET 283
Query: 342 G 342
G
Sbjct: 284 G 284
>UNIPROTKB|F1PBB3 [details] [associations]
symbol:HERC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:HIFAGTY EMBL:AAEX03016752
EMBL:AAEX03016750 EMBL:AAEX03016751 Ensembl:ENSCAFT00000015531
Uniprot:F1PBB3
Length = 1018
Score = 218 (81.8 bits), Expect = 6.6e-15, P = 6.6e-15
Identities = 72/238 (30%), Positives = 107/238 (44%)
Query: 115 QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
Q +G H+LL+ SN V SCG + G LG RI HV VS +
Sbjct: 27 QAASGERHSLLLLSNGQVHSCGDNGRGQLGQRGAPCSAQLKERIRALETLHVDLVSCGKE 86
Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
H+ V G+VF G S G + P ++ L + KQV+ G + L+
Sbjct: 87 HSLAVCHKGRVFAWGAGSEGQLGTGEFKETNLIPMKIKTLNDIKIKQVSCGHYHSLALSE 146
Query: 234 RGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
G V + GSN+ GQLG G + +P+ + L+ + + Q+AAG ++ A++ +G S
Sbjct: 147 GGQVFSWGSNSDGQLGLGKKFPSQASPQRVRSLDGI-PLAQVAAGGAHSFALSLSGT--S 203
Query: 293 FGSGSNFCLGHGEQH------DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
FG G N G H +P +I + G V+ +S G EH V L +G V
Sbjct: 204 FGWGRNNA-GQLALHKNNVSGQSYKPYSISALKNLG--VIYISCGYEHTVVLTQNGKV 258
Score = 209 (78.6 bits), Expect = 7.4e-14, P = 7.4e-14
Identities = 61/184 (33%), Positives = 91/184 (49%)
Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
Q++ G YH+L +S VFS GS+ G LG G + S R+ + QV+A
Sbjct: 133 QVSCGHYHSLALSEGGQVFSWGSNSDGQLGLGKKFPSQASPQRVRSLDGIPLAQVAAGGA 192
Query: 174 HAAFVLQSGQVFTCG-DNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
H+ + SG F G +N+ H++ + ++P + ALK + ++ G T L
Sbjct: 193 HSFALSLSGTSFGWGRNNAGQLALHKNNVSGQSYKPYSISALKNLGVIYISCGYEHTVVL 252
Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA-VTGNGVV 290
T G V T G NT+GQLGH T ++ P+ + ++ G V QI G + LA V G V
Sbjct: 253 TQNGKVFTFGDNTYGQLGHSPTAEKSGPQLVEGID--GLVSQIDCGSYHTLAYVYTTGKV 310
Query: 291 YSFG 294
SFG
Sbjct: 311 VSFG 314
Score = 204 (76.9 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 64/227 (28%), Positives = 110/227 (48%)
Query: 116 ITTGRYHTLLISNSS-VFSCGSSLCGVLGHGP-ETTQCVSFTRINFPSAAHVVQVSASEN 173
++ G+ H+L + + VF+ G+ G LG G + T + +I + + QVS
Sbjct: 81 VSCGKEHSLAVCHKGRVFAWGAGSEGQLGTGEFKETNLIPM-KIKTLNDIKIKQVSCGHY 139
Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
H+ + + GQVF+ G NS G P+ V +L G+P QV AG + L++
Sbjct: 140 HSLALSEGGQVFSWGSNSDGQLGLGKKFPSQASPQRVRSLDGIPLAQVAAGGAHSFALSL 199
Query: 234 RGHVHTCGSNTHGQLG-HGDTLDRPT--PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
G G N GQL H + + + P SI+ L+ +G V+ I+ G + + +T NG V
Sbjct: 200 SGTSFGWGRNNAGQLALHKNNVSGQSYKPYSISALKNLG-VIYISCGYEHTVVLTQNGKV 258
Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
++FG + LGH ++ P+ ++ G+ V ++ G H +A
Sbjct: 259 FTFGDNTYGQLGHSPTAEKSGPQLVEGI--DGL-VSQIDCGSYHTLA 302
Score = 168 (64.2 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 50/144 (34%), Positives = 70/144 (48%)
Query: 203 PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GDTLDRPTPKS 261
P+ R R+ L GV +Q +G + L G VH+CG N GQLG G +
Sbjct: 12 PVSRRRV--GLGGVELRQAASGERHSLLLLSNGQVHSCGDNGRGQLGQRGAPCSAQLKER 69
Query: 262 IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRR 320
I LE + V ++ G + LAV G V+++G+GS LG GE + L P I+T
Sbjct: 70 IRALETL-HVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGTGEFKETNLIPMKIKTLN- 127
Query: 321 KGIHVVRVSAGDEHVVALDSSGYV 344
I + +VS G H +AL G V
Sbjct: 128 -DIKIKQVSCGHYHSLALSEGGQV 150
>UNIPROTKB|Q9UGK8 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0050709 "negative
regulation of protein secretion" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IDA] InterPro:IPR027048 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0007165 GO:GO:0005730
GO:GO:0045111 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005087 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0050709 eggNOG:COG5184 CTD:26297
HOGENOM:HOG000154414 HOVERGEN:HBG051746 KO:K15421 OMA:NIWAPKP
OrthoDB:EOG4J1183 PANTHER:PTHR22870:SF7 EMBL:AJ243950 EMBL:AJ243951
EMBL:BC065375 IPI:IPI00015919 IPI:IPI00383576 RefSeq:NP_036271.1
UniGene:Hs.32470 ProteinModelPortal:Q9UGK8 SMR:Q9UGK8 IntAct:Q9UGK8
STRING:Q9UGK8 PhosphoSite:Q9UGK8 DMDM:38257790 PaxDb:Q9UGK8
PeptideAtlas:Q9UGK8 PRIDE:Q9UGK8 Ensembl:ENST00000265965
Ensembl:ENST00000528200 GeneID:26297 KEGG:hsa:26297 UCSC:uc001mnm.3
UCSC:uc001mnn.3 GeneCards:GC11M017767 HGNC:HGNC:17499 HPA:HPA037811
MIM:606051 neXtProt:NX_Q9UGK8 PharmGKB:PA143485610
InParanoid:Q9UGK8 PhylomeDB:Q9UGK8 GenomeRNAi:26297 NextBio:48643
ArrayExpress:Q9UGK8 Bgee:Q9UGK8 CleanEx:HS_SERGEF
Genevestigator:Q9UGK8 GermOnline:ENSG00000129158 Uniprot:Q9UGK8
Length = 458
Score = 210 (79.0 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 71/226 (31%), Positives = 110/226 (48%)
Query: 129 SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
+++F+ G++ G LG G + + +F V +++ H+A V G +F CG
Sbjct: 15 AALFAWGANSYGQLGLGHKEDVLLPQQLNDFCKPRSVRRITGGGGHSAVVTDGGDLFVCG 74
Query: 189 DNSS--FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
N GH + + P F P ++L G P +QV G +FT LT G V +CGSN+ G
Sbjct: 75 LNKDGQLGLGHTE-DIPYFTP--CKSLFGCPIQQVACGWDFTIMLTENGQVLSCGSNSFG 131
Query: 247 QLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG 304
QLG HG P++I +E VV IAAG + +A T +G+V+ +G+G C G
Sbjct: 132 QLGVPHGPRRC-VVPQAIELHKE--KVVCIAAGLRHAVAATASGIVFQWGTGLASC-GRR 187
Query: 305 EQHDELQP---RAIQTFRRKGIH---VVRVSAGDEHVVALDSSGYV 344
+ P A + R G+ + V AG +H +L +G V
Sbjct: 188 LCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEV 233
Score = 174 (66.3 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 63/199 (31%), Positives = 91/199 (45%)
Query: 115 QITTGRYHTLLIS-NSSVFSCGSSLCGVLG--HGPETTQCVSFTRINFPSAAHVVQVSAS 171
Q+ G T++++ N V SCGS+ G LG HGP +CV I VV ++A
Sbjct: 105 QVACGWDFTIMLTENGQVLSCGSNSFGQLGVPHGPR--RCVVPQAIELHKEK-VVCIAAG 161
Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHR---DTNRPIF----RPRLVEALKGVPCKQVTAG 224
HA SG VF G + CG R P+F P V L+ V AG
Sbjct: 162 LRHAVAATASGIVFQWGTGLA-SCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAG 220
Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYMLA 283
+ + LT G V+ GSN HGQL + + P P+ I A + V I +G ++++A
Sbjct: 221 SDHSASLTDAGEVYVWGSNKHGQLAN-EAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVA 279
Query: 284 VTGNGVVYSFGSGSNFCLG 302
T G ++++G LG
Sbjct: 280 QTETGKMFTWGRADYGQLG 298
Score = 135 (52.6 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 63/241 (26%), Positives = 99/241 (41%)
Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
+IT G H+ ++++ +F CG + G LG G T FT + QV+ +
Sbjct: 53 RITGGGGHSAVVTDGGDLFVCGLNKDGQLGLG-HTEDIPYFTPCKSLFGCPIQQVACGWD 111
Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG-VPCKQVTAGLNFTGFLT 232
+ ++GQV +CG NS G R P+ +E K V C + AGL T
Sbjct: 112 FTIMLTENGQVLSCGSNSFGQLGVPHGPRRCVVPQAIELHKEKVVC--IAAGLRHAVAAT 169
Query: 233 IRGHVHTCGSNTHG---QLGHGDTLD----RPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
G V G+ +L G TL P + LE + + AG + ++T
Sbjct: 170 ASGIVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLEN-SKAMCVLAGSDHSASLT 228
Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQ----PRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
G VY +GS HG+ +E P+ I+ + V + +G H+VA +
Sbjct: 229 DAGEVYVWGSNK-----HGQLANEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTET 283
Query: 342 G 342
G
Sbjct: 284 G 284
>MGI|MGI:1917200 [details] [associations]
symbol:Rcbtb2 "regulator of chromosome condensation (RCC1)
and BTB (POZ) domain containing protein 2" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651
PROSITE:PS50097 SMART:SM00225 MGI:MGI:1917200 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GeneTree:ENSGT00700000104208 HOGENOM:HOG000065752
HOVERGEN:HBG053261 KO:K11494 CTD:1102 OrthoDB:EOG4M91R6
ChiTaRS:RCBTB2 EMBL:AK031242 EMBL:AK031248 EMBL:AK160881
EMBL:BC003224 IPI:IPI00308981 IPI:IPI00661148 RefSeq:NP_001164165.1
RefSeq:NP_598844.3 UniGene:Mm.280068 ProteinModelPortal:Q99LJ7
SMR:Q99LJ7 STRING:Q99LJ7 PhosphoSite:Q99LJ7 PaxDb:Q99LJ7
PRIDE:Q99LJ7 Ensembl:ENSMUST00000022702 Ensembl:ENSMUST00000110952
Ensembl:ENSMUST00000164822 Ensembl:ENSMUST00000169479
Ensembl:ENSMUST00000169513 Ensembl:ENSMUST00000170677 GeneID:105670
KEGG:mmu:105670 UCSC:uc007upj.2 UCSC:uc007upm.2 InParanoid:Q99LJ7
OMA:QMCSMAV NextBio:357822 Bgee:Q99LJ7 Genevestigator:Q99LJ7
GermOnline:ENSMUSG00000022106 Uniprot:Q99LJ7
Length = 551
Score = 210 (79.0 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 67/236 (28%), Positives = 101/236 (42%)
Query: 110 SAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
SAGN + Y T+ N +F G++ G LG G + + R++ + + +S
Sbjct: 53 SAGNEVL----YTTV---NDEIFVLGTNCSGCLGVG-DIQSTIEPRRLDSLTGKKIASLS 104
Query: 170 -ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
S H G+VFT G N+ G+ TN + + L +V G +
Sbjct: 105 YGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHS 164
Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
LT G V G N GQ+G G T ++P P+ + + V+ IA G +AV G
Sbjct: 165 LVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTG 224
Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
VY +G N LG G + QP + +GI V RV+ G H + L G +
Sbjct: 225 EVYVWGYNGNGQLGLGSSGN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQI 278
Score = 194 (73.4 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 59/226 (26%), Positives = 105/226 (46%)
Query: 118 TGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 177
+G + L ++ VF+ G + LG+G V S V++V+ H+
Sbjct: 107 SGPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLV 166
Query: 178 VLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
+ G+VF G N+S G T N+PI R R+ L+ + G + + G
Sbjct: 167 LTSDGEVFAWGYNNSGQVGSGSTANQPIPR-RVTGCLQNKVVMNIACGQMCSMAVVDTGE 225
Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
V+ G N +GQLG G + ++PTP +A L+ + V ++A G ++ L +T G +Y++G+
Sbjct: 226 VYVWGYNGNGQLGLGSSGNQPTPCRVAALQGI-RVQRVACGYAHTLVLTDEGQIYAWGAN 284
Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
S LG G + ++ P + + + I + + H A + G
Sbjct: 285 SYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSA--HTSAAKTQG 328
Score = 172 (65.6 bits), Expect = 4.7e-10, P = 4.7e-10
Identities = 57/206 (27%), Positives = 99/206 (48%)
Query: 107 VETSAGNMQI---TTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA 162
+ T+ N Q+ G YH+L++ S+ VF+ G + G +G G Q +
Sbjct: 145 ISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQN 204
Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQV 221
V+ ++ + + V+ +G+V+ G N + G + N+P P V AL+G+ ++V
Sbjct: 205 KVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPT--PCRVAALQGIRVQRV 262
Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY- 280
G T LT G ++ G+N++GQLG G+ ++ P + + E +++IAA S
Sbjct: 263 ACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPV--VVEKDRIIEIAACHSAH 320
Query: 281 -MLAVTGNGVVYSFGS--GSNFCLGH 303
A T G VY +G G + L H
Sbjct: 321 TSAAKTQGGHVYMWGQCRGQSVILPH 346
>UNIPROTKB|F1S9B1 [details] [associations]
symbol:SERGEF "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050709 "negative regulation of protein secretion"
evidence=IEA] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR027048 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005730 GO:GO:0045111 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GO:GO:0050709 GeneTree:ENSGT00700000104160 PANTHER:PTHR22870:SF7
EMBL:CU914672 EMBL:CU467662 EMBL:CU693468
Ensembl:ENSSSCT00000014607 OMA:VYQWGTG Uniprot:F1S9B1
Length = 338
Score = 204 (76.9 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 69/223 (30%), Positives = 102/223 (45%)
Query: 129 SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
+++F+ G++ G LG G + + F V +++ H+A V G +F CG
Sbjct: 15 TALFAWGANSYGQLGLGHKEDVLLPQQLSEFCKPGCVKRITGGGGHSAIVTDQGSLFVCG 74
Query: 189 DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 248
N G T ++ L ++L G P +QV G +FT LT G V +CGSN+ GQL
Sbjct: 75 LNKDGQLGLGHTEDVLYFT-LCKSLLGCPIQQVACGWDFTIILTKNGQVLSCGSNSFGQL 133
Query: 249 G--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG-----SGSNFCL 301
G HG P++I E VV IAAG + LA T +G+V+ +G SG C
Sbjct: 134 GVPHGPRRC-VVPQAIEVQRE--KVVSIAAGLRHALAATASGLVFQWGTGLASSGRRLCP 190
Query: 302 GHGEQH--DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
G +P + T + V V AG H +L +G
Sbjct: 191 GQTLPLFLTAKEPSKV-TVGLENSQAVCVLAGSGHSASLTDAG 232
Score = 151 (58.2 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 60/200 (30%), Positives = 88/200 (44%)
Query: 115 QITTGRYHTLLIS-NSSVFSCGSSLCGVLG--HGPETTQCVSFTRINFPSAAHVVQVSAS 171
Q+ G T++++ N V SCGS+ G LG HGP +CV I VV ++A
Sbjct: 105 QVACGWDFTIILTKNGQVLSCGSNSFGQLGVPHGPR--RCVVPQAIEV-QREKVVSIAAG 161
Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHR---DTNRPIF----RP-RLVEALKGVPCKQVTA 223
HA SG VF G + G R P+F P ++ L+ V A
Sbjct: 162 LRHALAATASGLVFQWGTGLA-SSGRRLCPGQTLPLFLTAKEPSKVTVGLENSQAVCVLA 220
Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYML 282
G + LT G ++ GSN HGQL P P+ I A + V + +G ++++
Sbjct: 221 GSGHSASLTDAGELYVWGSNKHGQLA-SQAAFLPLPQKIEAHRFQNEKVAAVWSGWTHLV 279
Query: 283 AVTGNGVVYSFGSGSNFCLG 302
A T G V+++G LG
Sbjct: 280 AQTETGKVFTWGRADYGQLG 299
Score = 149 (57.5 bits), Expect = 7.1e-08, P = 7.1e-08
Identities = 55/166 (33%), Positives = 80/166 (48%)
Query: 184 VFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 241
+F G NS GH++ + +L E K K++T G + +T +G + CG
Sbjct: 17 LFAWGANSYGQLGLGHKED--VLLPQQLSEFCKPGCVKRITGGGGHSAIVTDQGSLFVCG 74
Query: 242 SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNGVVYSFGSGSNFC 300
N GQLG G T D L +G +Q +A G + + +T NG V S GS S
Sbjct: 75 LNKDGQLGLGHTEDVLYFTLCKSL--LGCPIQQVACGWDFTIILTKNGQVLSCGSNSFGQ 132
Query: 301 LG--HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
LG HG + + P+AI+ R K VV ++AG H +A +SG V
Sbjct: 133 LGVPHGPRRCVV-PQAIEVQREK---VVSIAAGLRHALAATASGLV 174
Score = 144 (55.7 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 63/238 (26%), Positives = 100/238 (42%)
Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
+IT G H+ ++++ S+F CG + G LG G T + FT + QV+ +
Sbjct: 53 RITGGGGHSAIVTDQGSLFVCGLNKDGQLGLG-HTEDVLYFTLCKSLLGCPIQQVACGWD 111
Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
+ ++GQV +CG NS G R P+ +E + + AGL T
Sbjct: 112 FTIILTKNGQVLSCGSNSFGQLGVPHGPRRCVVPQAIEVQRE-KVVSIAAGLRHALAATA 170
Query: 234 RGHVHTCGSN--THGQ-LGHGDTLD----RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
G V G+ + G+ L G TL P + E V + AG + ++T
Sbjct: 171 SGLVFQWGTGLASSGRRLCPGQTLPLFLTAKEPSKVTVGLENSQAVCVLAGSGHSASLTD 230
Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
G +Y +GS + L L P+ I+ R + V V +G H+VA +G V
Sbjct: 231 AGELYVWGSNKHGQLASQAAFLPL-PQKIEAHRFQNEKVAAVWSGWTHLVAQTETGKV 287
>RGD|1563497 [details] [associations]
symbol:Sergef "secretion regulating guanine nucleotide exchange
factor" species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IEA;ISO] [GO:0050709 "negative regulation of
protein secretion" evidence=IEA;ISO] InterPro:IPR027048 RGD:1563497
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005730 GO:GO:0045111
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0050709
GeneTree:ENSGT00700000104160 OrthoDB:EOG4J1183
PANTHER:PTHR22870:SF7 IPI:IPI00360920 Ensembl:ENSRNOT00000015352
UCSC:RGD:1563497 Uniprot:D3ZN16
Length = 339
Score = 204 (76.9 bits), Expect = 2.4e-14, P = 2.4e-14
Identities = 72/228 (31%), Positives = 105/228 (46%)
Query: 126 ISNSSV-FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
+S ++V F+ G++ G LG G + + +F + + V+ H+ V G +
Sbjct: 11 VSAAAVLFAWGANSYGQLGLGHKEDVLLPQQLSDFCKSGCIKSVTGGGGHSVVVTDGGGL 70
Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
F CG N G T + R + + L G P +QV G +FT LT +G V +CGSN
Sbjct: 71 FVCGLNKDGQLGLGHTEE-VLRFTICKPLLGCPIRQVACGWDFTIMLTEKGQVLSCGSNA 129
Query: 245 HGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG-----SGS 297
GQLG HG P++I L E VV +AAG + LA T G + +G SG
Sbjct: 130 FGQLGVPHGPR-KCVVPQAIECLRE--KVVCVAAGLRHALATTDTGSTFQWGTGLASSGR 186
Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIH---VVRVSAGDEHVVALDSSG 342
C G Q+ L A + R G+ VV AG +H +L +G
Sbjct: 187 RLCPG---QNLPLFLTAKEPSRVTGLESSTVVCAVAGSDHSASLTDTG 231
Score = 148 (57.2 bits), Expect = 9.3e-08, P = 9.3e-08
Identities = 66/237 (27%), Positives = 99/237 (41%)
Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLG--HGPETTQCVSFTRINFPSAAHVVQVSAS 171
Q+ G T++++ V SCGS+ G LG HGP +CV I VV V+A
Sbjct: 105 QVACGWDFTIMLTEKGQVLSCGSNAFGQLGVPHGPR--KCVVPQAIEC-LREKVVCVAAG 161
Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHR---DTNRPIF----RPRLVEALKGVPCKQVTAG 224
HA +G F G + G R N P+F P V L+ AG
Sbjct: 162 LRHALATTDTGSTFQWGTGLA-SSGRRLCPGQNLPLFLTAKEPSRVTGLESSTVVCAVAG 220
Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYMLA 283
+ + LT G ++ G N HGQL T P P+ + A + V + +G ++++A
Sbjct: 221 SDHSASLTDTGELYVWGRNKHGQLASLATF-LPLPQRVEAHYFQDEKVTAVWSGWTHLVA 279
Query: 284 VTGNGVVYSFGSGSNFCLG----------HGEQHDELQPRAIQTFRRKGIHVVRVSA 330
T G V+++G LG HGEQ L + +Q +H + +A
Sbjct: 280 KTETGKVFTWGRADYGQLGRTLGSPEAQKHGEQDSSLAFQRLQNSVPSPLHCLTGAA 336
Score = 130 (50.8 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 61/238 (25%), Positives = 100/238 (42%)
Query: 116 ITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
+T G H++++++ +F CG + G LG G T + + FT + QV+ +
Sbjct: 54 VTGGGGHSVVVTDGGGLFVCGLNKDGQLGLG-HTEEVLRFTICKPLLGCPIRQVACGWDF 112
Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG-VPCKQVTAGLNFTGFLTI 233
+ + GQV +CG N+ G R P+ +E L+ V C V AGL T
Sbjct: 113 TIMLTEKGQVLSCGSNAFGQLGVPHGPRKCVVPQAIECLREKVVC--VAAGLRHALATTD 170
Query: 234 RGHVHTCGSN--THGQ-LGHGDTLD----RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
G G+ + G+ L G L P + LE +VV AG + ++T
Sbjct: 171 TGSTFQWGTGLASSGRRLCPGQNLPLFLTAKEPSRVTGLES-STVVCAVAGSDHSASLTD 229
Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
G +Y +G + L L P+ ++ + V V +G H+VA +G V
Sbjct: 230 TGELYVWGRNKHGQLASLATFLPL-PQRVEAHYFQDEKVTAVWSGWTHLVAKTETGKV 286
>MGI|MGI:1344037 [details] [associations]
symbol:Rpgr "retinitis pigmentosa GTPase regulator"
species:10090 "Mus musculus" [GO:0001750 "photoreceptor outer
segment" evidence=ISO] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005929
"cilium" evidence=IDA] [GO:0007601 "visual perception"
evidence=ISO;IMP] [GO:0030030 "cell projection organization"
evidence=IEA] [GO:0042384 "cilium assembly" evidence=ISO]
[GO:0042462 "eye photoreceptor cell development" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0050896 "response
to stimulus" evidence=IEA] MGI:MGI:1344037 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005794 GO:GO:0005737 GO:GO:0005813
GO:GO:0005929 GO:GO:0007601 GO:GO:0050896 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042073
eggNOG:COG5184 GO:GO:0036064 GO:GO:0042462
GeneTree:ENSGT00700000104160 GO:GO:0036126 CTD:6103
HOGENOM:HOG000231314 HOVERGEN:HBG026899 ChiTaRS:RPGR EMBL:AF044677
EMBL:AJ238396 EMBL:AJ318464 EMBL:AL671042 EMBL:AK017192
EMBL:BX005236 EMBL:HQ260316 IPI:IPI00122416 IPI:IPI00128188
IPI:IPI00230648 IPI:IPI00230650 RefSeq:NP_001171421.1
RefSeq:NP_035415.1 UniGene:Mm.247556 ProteinModelPortal:Q9R0X5
SMR:Q9R0X5 DIP:DIP-46319N STRING:Q9R0X5 PhosphoSite:Q9R0X5
PRIDE:Q9R0X5 Ensembl:ENSMUST00000044598 GeneID:19893 KEGG:mmu:19893
UCSC:uc009sqj.2 InParanoid:Q9R0X5 NextBio:297416 CleanEx:MM_RPGR
Genevestigator:Q9R0X5 GermOnline:ENSMUSG00000031174 Uniprot:Q9R0X5
Length = 1001
Score = 211 (79.3 bits), Expect = 4.2e-14, P = 4.2e-14
Identities = 67/229 (29%), Positives = 116/229 (50%)
Query: 119 GRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV-QVSASENHAA 176
GR HTL+ +++ V++ G + G LG G +T +F +I F + A + Q+SA N +A
Sbjct: 95 GRNHTLVSTDTGGVYAAGGNNEGQLGLG-DTDDRDTFHQIVFFTPADTIKQLSAGANTSA 153
Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
+ + G++F GDNS G D + + P E G P ++ G + F+T+ G
Sbjct: 154 ALTEDGKLFMWGDNSEGQIGLEDKSN-VCIPH--EVTVGKPISWISCGYYHSAFVTMDGE 210
Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
++T G +G+LG + L + +P+ + + E V+Q+A G + + +T VVY+FG
Sbjct: 211 LYTFGEPENGKLGLPNELLMNHRSPQRVLGIPE--RVIQVACGGGHTVVLTEK-VVYAFG 267
Query: 295 SGSNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
G LG G + +P+ I+ R K + +S G+ H + G
Sbjct: 268 LGQFGQLGLGTFLFETSEPKIIE--RIKDQKICHISCGENHTALMTELG 314
Score = 160 (61.4 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 49/178 (27%), Positives = 79/178 (44%)
Query: 168 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
+S + H A V + +++ G N+ G + I +P ++ALK K G N
Sbjct: 40 LSCGDEHTAIVTGNNKLYMFGSNNWGQLG-LGSKAAIIKPTCIKALKPEKVKLAACGRNH 98
Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
T T G V+ G N GQLG GDT DR T I ++ Q++AG + A+T +
Sbjct: 99 TLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSAALTED 158
Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH--VVALDSSGY 343
G ++ +G S +G ++ + P + G + +S G H V +D Y
Sbjct: 159 GKLFMWGDNSEGQIGLEDKSNVCIPHEVTV----GKPISWISCGYYHSAFVTMDGELY 212
Score = 140 (54.3 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 55/229 (24%), Positives = 103/229 (44%)
Query: 115 QITTG-RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSF-TRINFPSAAHVVQVSASE 172
Q++ G L + +F G + G +G ++ C+ + P + +S
Sbjct: 144 QLSAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVGKP----ISWISCGY 199
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK--QVTAGLNFTGF 230
H+AFV G+++T G+ + G N + R + + G+P + QV G T
Sbjct: 200 YHSAFVTMDGELYTFGEPENGKLGL--PNELLMNHRSPQRVLGIPERVIQVACGGGHTVV 257
Query: 231 LTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
LT + V+ G GQLG G L + PK I +++ + I+ G ++ +T G+
Sbjct: 258 LTEKV-VYAFGLGQFGQLGLGTFLFETSEPKIIERIKDQ-KICHISCGENHTALMTELGL 315
Query: 290 VYSFGSGSNFCLGHGEQH--DELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
+Y+FG G + LG G ++ ++ P F R + ++ + G H++
Sbjct: 316 LYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLI--ACGGCHML 362
>UNIPROTKB|Q8IVU3 [details] [associations]
symbol:HERC6 "Probable E3 ubiquitin-protein ligase HERC6"
species:9606 "Homo sapiens" [GO:0005829 "cytosol" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 HOVERGEN:HBG050878 HSSP:Q9UEP9 EMBL:AF336798
EMBL:AY653201 EMBL:AK000644 EMBL:AK092403 EMBL:AK295832
EMBL:BC035775 EMBL:BC042047 EMBL:AL833664 EMBL:BX647121
IPI:IPI00168048 IPI:IPI00455627 IPI:IPI00554785
RefSeq:NP_001158608.1 RefSeq:NP_060382.3 UniGene:Hs.529317
ProteinModelPortal:Q8IVU3 SMR:Q8IVU3 IntAct:Q8IVU3 STRING:Q8IVU3
PhosphoSite:Q8IVU3 DMDM:74750679 PaxDb:Q8IVU3 PRIDE:Q8IVU3
Ensembl:ENST00000264346 Ensembl:ENST00000273960
Ensembl:ENST00000380265 GeneID:55008 KEGG:hsa:55008 UCSC:uc011cdi.2
UCSC:uc011cdj.2 CTD:55008 GeneCards:GC04P089299 HGNC:HGNC:26072
HPA:HPA035846 MIM:609249 neXtProt:NX_Q8IVU3 PharmGKB:PA134894313
InParanoid:Q8IVU3 OMA:HIFAGTY GenomeRNAi:55008 NextBio:58353
ArrayExpress:Q8IVU3 Bgee:Q8IVU3 Genevestigator:Q8IVU3
Uniprot:Q8IVU3
Length = 1022
Score = 206 (77.6 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 53/182 (29%), Positives = 98/182 (53%)
Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
A ++Q ++ E H+ +L + +V +CGDNS G R R P ++AL+ + V+
Sbjct: 23 AELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGEL-PEPIQALETLIVDLVS 81
Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYM 281
G + + +G V G+ + GQLG G+ + TPK I L ++ ++Q++ G +
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDI-KIIQVSCGHYHS 140
Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
LA++ + V+S+G S+ LG G++ + P+ +++ +GI + +V+AG H AL
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHSFALSL 198
Query: 341 SG 342
G
Sbjct: 199 CG 200
Score = 205 (77.2 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 68/236 (28%), Positives = 119/236 (50%)
Query: 116 ITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFT--RINFPSAAHVVQVSASE 172
++ G+ H+L + + VF+ G+ G LG G E + +SFT +I + ++QVS
Sbjct: 80 VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIG-EFKE-ISFTPKKIMTLNDIKIIQVSCGH 137
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
H+ + + QVF+ G NS G P+ V +L+G+P QV AG + L+
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS 197
Query: 233 IRGHVHTCGSNTHGQL---GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
+ G GSN+ GQL G + P S+ L+ +G VV I+ G ++ +T +G
Sbjct: 198 LCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLG-VVYISCGDAHTAVLTQDGK 256
Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYV 344
V++FG + LG+ ++ P+ ++ R G+ V ++ G H +A + ++G V
Sbjct: 257 VFTFGDNRSGQLGYSPTPEKRGPQLVE--RIDGL-VSQIDCGSYHTLAYVHTTGQV 309
Score = 202 (76.2 bits), Expect = 4.8e-13, P = 4.8e-13
Identities = 66/235 (28%), Positives = 106/235 (45%)
Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGH-GPETTQCVSFTRINFPSAAHVVQVSAS 171
+Q +G H+LL+ +N V SCG + G LG G + + I V VS
Sbjct: 26 LQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPE--PIQALETLIVDLVSCG 83
Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
+ H+ V G+VF G S G + F P+ + L + QV+ G + L
Sbjct: 84 KEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLAL 143
Query: 232 TIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
+ V + G N+HGQLG G + +P+ + LE + + Q+AAG ++ A++ G
Sbjct: 144 SKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLCGTS 202
Query: 291 YSFGSGSNFCLGHGEQHDELQP-RAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
+ +GS S L ++ +Q + + K + VV +S GD H L G V
Sbjct: 203 FGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKV 257
Score = 198 (74.8 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 63/187 (33%), Positives = 89/187 (47%)
Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
+Q++ G YH+L +S +S VFS G + G LG G E S R+ + QV+A
Sbjct: 131 IQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGG 190
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF--RPRLVEALKGVPCKQVTAGLNFTGF 230
H+ + G F G NS+ N P+ +P V ALK + ++ G T
Sbjct: 191 AHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAV 250
Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA-VTGNGV 289
LT G V T G N GQLG+ T ++ P+ + ++ G V QI G + LA V G
Sbjct: 251 LTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERID--GLVSQIDCGSYHTLAYVHTTGQ 308
Query: 290 VYSFGSG 296
V SFG G
Sbjct: 309 VVSFGHG 315
Score = 145 (56.1 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 48/153 (31%), Positives = 70/153 (45%)
Query: 193 FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD 252
FC G D+ R + R R + G Q +G + L V +CG N+ GQLG
Sbjct: 3 FCWG-ADS-RELQRRRTAGS-PGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRG 59
Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD-ELQ 311
P+ I LE + V ++ G + LAV G V+++G+GS LG GE +
Sbjct: 60 AQRGELPEPIQALETL-IVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFT 118
Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
P+ I T I +++VS G H +AL V
Sbjct: 119 PKKIMTLN--DIKIIQVSCGHYHSLALSKDSQV 149
Score = 127 (49.8 bits), Expect = 0.00011, P = 0.00011
Identities = 61/232 (26%), Positives = 102/232 (43%)
Query: 50 PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
P+K +L D+ Q+ H +S++ Q+ + N + + L + S V +
Sbjct: 119 PKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGK-NSHGQLGLGKEFPSQASPQRVRS 177
Query: 110 SAGN--MQITTGRYHTLLISNSSV-FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH-- 164
G Q+ G H+ +S F GS+ G L S ++ + +
Sbjct: 178 LEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLG 237
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTA 223
VV +S + H A + Q G+VFT GDN S G+ T P R P+LVE + G+ Q+
Sbjct: 238 VVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPT--PEKRGPQLVERIDGL-VSQIDC 294
Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHG--DTLDRPT-PKSIAPLEEVGSVV 272
G + T+ +VHT G GHG DT +PT P+++ ++ ++
Sbjct: 295 G----SYHTL-AYVHTTGQVV--SFGHGPSDT-SKPTHPEALTENFDISCLI 338
>UNIPROTKB|F1NUG6 [details] [associations]
symbol:Gga.50841 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005929
"cilium" evidence=IEA] [GO:0007601 "visual perception"
evidence=IEA] [GO:0042462 "eye photoreceptor cell development"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
GO:GO:0005929 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104160 EMBL:AADN02011054 IPI:IPI00586770
Ensembl:ENSGALT00000026211 OMA:ENGLMFT Uniprot:F1NUG6
Length = 720
Score = 204 (76.9 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 67/226 (29%), Positives = 109/226 (48%)
Query: 119 GRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV-QVSASENHAA 176
GR HTL+ + +V++ G + G LG G +T + +F I+F + H + Q++A +A
Sbjct: 97 GRNHTLVYTEKGNVYAAGGNSEGQLGLG-DTEERTTFHLISFFTNQHKIKQLAAGSYTSA 155
Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
V + GQ+F GDNS G D + P V+ G P ++ G + F+T G
Sbjct: 156 AVTEDGQLFVWGDNSEGQIGLADKTC-VSVPCQVDV--GKPVSSISCGYYHSAFITGDGE 212
Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG---SVVQIAAGPSYMLAVTGNGVVYSF 293
++T G +G+LG L S P +G V ++A G + + +T GV Y+F
Sbjct: 213 LYTFGEPENGKLG---LLPEQLKNSRVPQPVLGIMEKVNKVACGGEHTVVLTETGV-YTF 268
Query: 294 GSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVAL 338
G G LGHG + P++++ R IH V+ G+ H +
Sbjct: 269 GLGQYGQLGHGTLLFKTSVPKSVKHLRSHKIH--NVTCGESHTAVI 312
Score = 172 (65.6 bits), Expect = 7.3e-10, P = 7.3e-10
Identities = 53/179 (29%), Positives = 81/179 (45%)
Query: 166 VQVSASENHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
V +S + H A V +G+++ G N G ++T R +P V+ALK K
Sbjct: 40 VHISCGDEHTAVVTGNGKLYMFGSNDWGQLGLGSKNTVR---KPTCVKALKPEKTKLAVC 96
Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
G N T T +G+V+ G N+ GQLG GDT +R T I+ + Q+AAG A
Sbjct: 97 GRNHTLVYTEKGNVYAAGGNSEGQLGLGDTEERTTFHLISFFTNQHKIKQLAAGSYTSAA 156
Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
VT +G ++ +G S +G ++ P + G V +S G H + G
Sbjct: 157 VTEDGQLFVWGDNSEGQIGLADKTCVSVPCQVDV----GKPVSSISCGYYHSAFITGDG 211
Score = 169 (64.5 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 62/230 (26%), Positives = 108/230 (46%)
Query: 115 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
Q+ G Y + ++ + +F G + G +G +T CVS V +S
Sbjct: 146 QLAAGSYTSAAVTEDGQLFVWGDNSEGQIGLADKT--CVSVP-CQVDVGKPVSSISCGYY 202
Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK--QVTAGLNFTGFL 231
H+AF+ G+++T G+ + G + R+ + + G+ K +V G T L
Sbjct: 203 HSAFITGDGELYTFGEPENGKLGLLPEQ--LKNSRVPQPVLGIMEKVNKVACGGEHTVVL 260
Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSY--MLAVTGNG 288
T G V+T G +GQLGHG L + + PKS+ L + + G S+ ++A T NG
Sbjct: 261 TETG-VYTFGLGQYGQLGHGTLLFKTSVPKSVKHLRS-HKIHNVTCGESHTAVIADTENG 318
Query: 289 VVYSFGSGSNFCLGHGEQH--DELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
++++FG G + LG GE++ ++ P F V+ V+ G H++
Sbjct: 319 LMFTFGDGRHGKLGLGEENFANQFDPALCSNFL--SFTVLLVACGGCHML 366
>UNIPROTKB|Q3MHW0 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9913 "Bos taurus" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0050709 "negative regulation of protein
secretion" evidence=IEA] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=IEA] InterPro:IPR027048 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 GO:GO:0005730 GO:GO:0045111 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0050709
eggNOG:COG5184 GeneTree:ENSGT00700000104160 EMBL:BC104610
IPI:IPI00689945 RefSeq:NP_001069489.1 UniGene:Bt.1247
ProteinModelPortal:Q3MHW0 STRING:Q3MHW0 PRIDE:Q3MHW0
Ensembl:ENSBTAT00000007022 GeneID:534377 KEGG:bta:534377 CTD:26297
HOGENOM:HOG000154414 HOVERGEN:HBG051746 InParanoid:Q3MHW0 KO:K15421
OMA:NIWAPKP OrthoDB:EOG4J1183 NextBio:20876380
PANTHER:PTHR22870:SF7 Uniprot:Q3MHW0
Length = 464
Score = 200 (75.5 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 68/224 (30%), Positives = 102/224 (45%)
Query: 129 SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
+++F+ G++ G LG G + + +F + + +++ H+A V G +F CG
Sbjct: 15 AALFAWGANSYGQLGLGHKEDVLSAQQLSDFCKSGCIKRITGGGGHSAVVTDEGSLFVCG 74
Query: 189 DNSSFCCGHRDTNRPI-FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
N G T + F P ++L G +QV G +FT LT G V +CGSN+ GQ
Sbjct: 75 LNKDGQLGLGHTEEVLYFTP--CKSLLGCAIQQVACGWDFTIILTENGQVLSCGSNSFGQ 132
Query: 248 LG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG-----SGSNFC 300
LG HG P++I L E VV IAAG + LA T +G V+ +G SG C
Sbjct: 133 LGVPHGPRRC-VIPQAIELLRE--KVVSIAAGLRHALAATASGTVFQWGTGLASSGRRLC 189
Query: 301 LGHGEQH--DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
G +P + V V AG +H +L +G
Sbjct: 190 PGQTLPLFLTAKEPSTVTGLENS--QAVCVLAGSDHSASLTDAG 231
Score = 149 (57.5 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 59/199 (29%), Positives = 87/199 (43%)
Query: 115 QITTGRYHTLLIS-NSSVFSCGSSLCGVLG--HGPETTQCVSFTRINFPSAAHVVQVSAS 171
Q+ G T++++ N V SCGS+ G LG HGP +CV I VV ++A
Sbjct: 105 QVACGWDFTIILTENGQVLSCGSNSFGQLGVPHGPR--RCVIPQAIEL-LREKVVSIAAG 161
Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHR---DTNRPIF----RPRLVEALKGVPCKQVTAG 224
HA SG VF G + G R P+F P V L+ V AG
Sbjct: 162 LRHALAATASGTVFQWGTGLA-SSGRRLCPGQTLPLFLTAKEPSTVTGLENSQAVCVLAG 220
Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYMLA 283
+ + LT G ++ GSN HGQL P+ I A + + + +G ++++A
Sbjct: 221 SDHSASLTDAGELYVWGSNKHGQLA-SQAAFLLLPQRIEARCFQNEKIAAVWSGWTHLVA 279
Query: 284 VTGNGVVYSFGSGSNFCLG 302
T G V+++G LG
Sbjct: 280 QTVTGKVFTWGRADYGQLG 298
Score = 149 (57.5 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 66/254 (25%), Positives = 110/254 (43%)
Query: 99 SVEHSSDIVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRI 157
S + SD ++ +IT G H+ ++++ S+F CG + G LG G T + + FT
Sbjct: 38 SAQQLSDFCKSGCIK-RITGGGGHSAVVTDEGSLFVCGLNKDGQLGLG-HTEEVLYFTPC 95
Query: 158 NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVP 217
+ QV+ + + ++GQV +CG NS G R P+ +E L+
Sbjct: 96 KSLLGCAIQQVACGWDFTIILTENGQVLSCGSNSFGQLGVPHGPRRCVIPQAIELLRE-K 154
Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSN--THGQ-LGHGDTLD----RPTPKSIAPLEEVGS 270
+ AGL T G V G+ + G+ L G TL P ++ LE
Sbjct: 155 VVSIAAGLRHALAATASGTVFQWGTGLASSGRRLCPGQTLPLFLTAKEPSTVTGLEN-SQ 213
Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
V + AG + ++T G +Y +GS + L + L P+ I+ + + V +
Sbjct: 214 AVCVLAGSDHSASLTDAGELYVWGSNKHGQLA-SQAAFLLLPQRIEARCFQNEKIAAVWS 272
Query: 331 GDEHVVALDSSGYV 344
G H+VA +G V
Sbjct: 273 GWTHLVAQTVTGKV 286
>UNIPROTKB|E1BVG2 [details] [associations]
symbol:RCBTB1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097
SMART:SM00225 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104208 OMA:NCSNCLG EMBL:AADN02005390
IPI:IPI00590638 Ensembl:ENSGALT00000027473 Uniprot:E1BVG2
Length = 531
Score = 201 (75.8 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 57/216 (26%), Positives = 97/216 (44%)
Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
N VF G + LG G + V ++ + +S S H + G+V+
Sbjct: 40 NDEVFVFGLNCSNCLGTGDSQSTIVP-KKLEALCGKKISSLSYGSGPHVLLCTEDGEVYA 98
Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
G N G+ TN+ + ++ L +V G + + L+ G ++ G N G
Sbjct: 99 WGHNGYSQLGNGATNQGVTPVQVCTNLLLKKVIEVACGSHHSMALSFDGDLYAWGYNNCG 158
Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
Q+G G T ++PTP+ ++ + VV IA G + +AV NG VY +G N LG G
Sbjct: 159 QVGSGSTANQPTPRRVSNCLQDKMVVGIACGQTSSMAVVNNGEVYGWGYNGNGQLGLGNN 218
Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
++L P + G+ +++++ G H +AL G
Sbjct: 219 GNQLTPCRVAALH--GVCILQIACGYAHTLALTDEG 252
Score = 173 (66.0 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 64/229 (27%), Positives = 113/229 (49%)
Query: 122 HTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRI--NFPSAAHVVQVSASENHAAFV 178
H LL + + V++ G + LG+G T Q V+ ++ N V++V+ +H+ +
Sbjct: 86 HVLLCTEDGEVYAWGHNGYSQLGNGA-TNQGVTPVQVCTNL-LLKKVIEVACGSHHSMAL 143
Query: 179 LQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
G ++ G N+ G T N+P R R+ L+ + G + + G V
Sbjct: 144 SFDGDLYAWGYNNCGQVGSGSTANQPTPR-RVSNCLQDKMVVGIACGQTSSMAVVNNGEV 202
Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
+ G N +GQLG G+ ++ TP +A L V ++QIA G ++ LA+T G++Y++G+ +
Sbjct: 203 YGWGYNGNGQLGLGNNGNQLTPCRVAALHGV-CILQIACGYAHTLALTDEGLLYAWGANT 261
Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA-GDEHVVALDS-SGYV 344
LG G + ++L P I + + VV ++A H A + SG V
Sbjct: 262 YGQLGTGNKSNQLSPLQIMMEKER---VVEIAACHSAHTSAAKTQSGQV 307
Score = 171 (65.3 bits), Expect = 5.8e-10, P = 5.8e-10
Identities = 56/195 (28%), Positives = 94/195 (48%)
Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
+++ G +H++ +S + +++ G + CG +G G Q N VV ++ +
Sbjct: 131 IEVACGSHHSMALSFDGDLYAWGYNNCGQVGSGSTANQPTPRRVSNCLQDKMVVGIACGQ 190
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
+ V+ +G+V+ G N + G + + P V AL GV Q+ G T LT
Sbjct: 191 TSSMAVVNNGEVYGWGYNGNGQLGLGNNGNQL-TPCRVAALHGVCILQIACGYAHTLALT 249
Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY--MLAVTGNGVV 290
G ++ G+NT+GQLG G+ ++ +P I + E VV+IAA S A T +G V
Sbjct: 250 DEGLLYAWGANTYGQLGTGNKSNQLSPLQI--MMEKERVVEIAACHSAHTSAAKTQSGQV 307
Query: 291 YSFGS--GSNFCLGH 303
Y +G G + L H
Sbjct: 308 YMWGQCRGQSVVLPH 322
Score = 161 (61.7 bits), Expect = 7.7e-09, P = 7.7e-09
Identities = 48/175 (27%), Positives = 85/175 (48%)
Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
S N A + + +VF G N S C G D+ I P+ +EAL G ++ G
Sbjct: 30 SANEAIYTTHNDEVFVFGLNCSNCLGTGDSQSTIV-PKKLEALCGKKISSLSYGSGPHVL 88
Query: 231 L-TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
L T G V+ G N + QLG+G T TP + + V+++A G + +A++ +G
Sbjct: 89 LCTEDGEVYAWGHNGYSQLGNGATNQGVTPVQVCTNLLLKKVIEVACGSHHSMALSFDGD 148
Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
+Y++G + +G G ++ PR + + + VV ++ G +A+ ++G V
Sbjct: 149 LYAWGYNNCGQVGSGSTANQPTPRRVSNCLQDKM-VVGIACGQTSSMAVVNNGEV 202
>DICTYBASE|DDB_G0282575 [details] [associations]
symbol:DDB_G0282575 "putative GTPase activating
protein (GAP)" species:44689 "Dictyostelium discoideum" [GO:0032851
"positive regulation of Rab GTPase activity" evidence=IEA]
[GO:0032313 "regulation of Rab GTPase activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005097 "Rab GTPase
activator activity" evidence=IEA] InterPro:IPR000195 Pfam:PF00566
PROSITE:PS50086 SMART:SM00164 dictyBase:DDB_G0282575
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AAFI02000047 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5210
GO:GO:0005097 GO:GO:0032851 SUPFAM:SSF47923 RefSeq:XP_640136.1
ProteinModelPortal:Q54SA3 EnsemblProtists:DDB0235329 GeneID:8623673
KEGG:ddi:DDB_G0282575 InParanoid:Q54SA3 OMA:NIVFRIW Uniprot:Q54SA3
Length = 1194
Score = 152 (58.6 bits), Expect = 4.9e-12, Sum P(2) = 4.9e-12
Identities = 39/132 (29%), Positives = 71/132 (53%)
Query: 209 LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD----RP----TPK 260
+ + + + Q++ G N L+ + HV++ GS HG+LGHG+ P +PK
Sbjct: 362 MTDQMNSIKIIQISCGSNHILALSDQYHVYSWGSAEHGKLGHGEDYSFVSQNPRWINSPK 421
Query: 261 SIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
I L+E G +V+ +++G S+ +A+T + + ++G GS+ LG G +HD P I+
Sbjct: 422 KIKSLQEKGVTVISVSSGYSHCMALTLDSGILTWGKGSDGQLGTGFRHDIWSPFEIKRVI 481
Query: 320 RKGIHVVRVSAG 331
K +V++ G
Sbjct: 482 DKNEKIVQICCG 493
Score = 139 (54.0 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 34/100 (34%), Positives = 54/100 (54%)
Query: 164 HVVQVSASENHAAFVLQSGQVFTCGD-NSSFCCGHRDTNRPIFRPR------LVEALKGV 216
++VQ+S H + SG +++ G NSS GH D+ +P+ L++AL G
Sbjct: 39 NIVQLSCGSTHTLVLSDSGDLYSWGSSNSSGQLGHGDSKNQYGKPKNIKKFSLIKALSGD 98
Query: 217 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR 256
QV+ GL+FT LT +G ++ GSN GQL G +++
Sbjct: 99 SVIQVSTGLDFTFVLTDQGSIYNWGSNIEGQLALGQPVNK 138
Score = 118 (46.6 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 34/114 (29%), Positives = 61/114 (53%)
Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
GSN + LG G ++ + + ++QI+ G +++LA++ VYS+GS +
Sbjct: 344 GSNDNNFLG-G-VINNELQMMTDQMNSI-KIIQISCGSNHILALSDQYHVYSWGSAEHGK 400
Query: 301 LGHGEQHDELQ--------PRAIQTFRRKGIHVVRVSAGDEHVVALD-SSGYVS 345
LGHGE + + P+ I++ + KG+ V+ VS+G H +AL SG ++
Sbjct: 401 LGHGEDYSFVSQNPRWINSPKKIKSLQEKGVTVISVSSGYSHCMALTLDSGILT 454
Score = 91 (37.1 bits), Expect = 4.9e-12, Sum P(2) = 4.9e-12
Identities = 29/95 (30%), Positives = 46/95 (48%)
Query: 105 DIVETSAGNM-QITTGRYHTLLISNSS-VFSCGSS-LCGVLGHGPETTQ------CVSFT 155
++ E + N+ Q++ G HTL++S+S ++S GSS G LGHG Q F+
Sbjct: 31 EVPELNKKNIVQLSCGSTHTLVLSDSGDLYSWGSSNSSGQLGHGDSKNQYGKPKNIKKFS 90
Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
I S V+QVS + + G ++ G N
Sbjct: 91 LIKALSGDSVIQVSTGLDFTFVLTDQGSIYNWGSN 125
Score = 49 (22.3 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL 310
+ QI++G S+ L + NG S G G LG H +
Sbjct: 566 IKQISSGYSHTLILNENGECLSIGQGEFGQLGIPLDHSSI 605
Score = 47 (21.6 bits), Expect = 0.00097, Sum P(2) = 0.00097
Identities = 13/56 (23%), Positives = 31/56 (55%)
Query: 106 IVETSAGN--MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRIN 158
+++ +G+ +Q++TG T ++++ S+++ GS++ G L G + IN
Sbjct: 91 LIKALSGDSVIQVSTGLDFTFVLTDQGSIYNWGSNIEGQLALGQPVNKNEKENNIN 146
>TAIR|locus:504956339 [details] [associations]
symbol:RUG1 "AT5G08710" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002688
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
EMBL:BT005498 EMBL:AK118882 IPI:IPI00533904 RefSeq:NP_680156.2
UniGene:At.45869 ProteinModelPortal:Q8GWF2 SMR:Q8GWF2 PRIDE:Q8GWF2
EnsemblPlants:AT5G08710.1 GeneID:830771 KEGG:ath:AT5G08710
TAIR:At5g08710 HOGENOM:HOG000006005 InParanoid:Q8GWF2 OMA:HSACIDE
PhylomeDB:Q8GWF2 ProtClustDB:CLSN2690903 Genevestigator:Q8GWF2
Uniprot:Q8GWF2
Length = 434
Score = 196 (74.1 bits), Expect = 5.2e-13, P = 5.2e-13
Identities = 71/288 (24%), Positives = 120/288 (41%)
Query: 68 HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGN---MQITTGRYHTL 124
H+++ +R V LN C G L H+ D +E S + + I+ G YH+
Sbjct: 93 HTLFLTETRRVFATGLNDC-GQ----LGVSDVKSHAMDPLEVSGLDKDILHISAGYYHSA 147
Query: 125 LIS-NSSVFSCGSSLCGVLGHGPETTQCVSF-TRINFPSAAHVVQVSASENHAAFVLQSG 182
I+ + ++ G + G LG G + + V T++ + V+ H+ V G
Sbjct: 148 AITVDGELYMWGKNSSGQLGLGKKAARVVRVPTKVEALHGITIQSVALGSEHSVAVTDGG 207
Query: 183 QVFTCGDNSSFCCGHRDTNRPI--------FRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
+V + G S GH + F PRL++ L+G+ V AGL +
Sbjct: 208 EVLSWGGGGSGRLGHGHQSSLFGILRSNSEFTPRLIKELEGIKVTNVAAGLLHSACTDEN 267
Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
G G + ++G G + TP I+ EV ++A G + VT G +Y++G
Sbjct: 268 GSAFMFGEKSINKMGFGGVRNATTPSIIS---EVPYAEEVACGGYHTCVVTRGGELYTWG 324
Query: 295 SGSNFCLGHGEQHDELQPRAIQ-TFRRKGIHVVRVSAGDEHVVALDSS 341
S N CLG + P ++ F + +VS G +H A+ +
Sbjct: 325 SNENGCLGTDSTYVSHSPVRVEGPFLESTVS--QVSCGWKHTAAISDN 370
Score = 174 (66.3 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 71/274 (25%), Positives = 114/274 (41%)
Query: 82 LLNRCNGNWKRVLRFLQSVEHSSDIVETSA-GNMQITTGRYHTLLISNSSVFSCGSSLCG 140
+L R G + + +Q +S +++ S G + + R+ + GS G
Sbjct: 1 MLTRAIGRVRIPVSRIQGSNCTSGLLKDSKLGPIGVCCSRWVSSESGKRFAAMWGSGDYG 60
Query: 141 VLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT 200
LG G +Q + S + V+ H F+ ++ +VF G N G D
Sbjct: 61 RLGLGNLDSQWTPAV-CSALSDHSITAVACGGAHTLFLTETRRVFATGLNDCGQLGVSDV 119
Query: 201 NRPIFRPRLVEAL-KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT- 258
P V L K + ++AG + +T+ G ++ G N+ GQLG G R
Sbjct: 120 KSHAMDPLEVSGLDKDI--LHISAGYYHSAAITVDGELYMWGKNSSGQLGLGKKAARVVR 177
Query: 259 -PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ---------HD 308
P + L + ++ +A G + +AVT G V S+G G + LGHG Q +
Sbjct: 178 VPTKVEALHGI-TIQSVALGSEHSVAVTDGGEVLSWGGGGSGRLGHGHQSSLFGILRSNS 236
Query: 309 ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
E PR I+ +GI V V+AG H D +G
Sbjct: 237 EFTPRLIKEL--EGIKVTNVAAGLLHSACTDENG 268
Score = 137 (53.3 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 64/246 (26%), Positives = 103/246 (41%)
Query: 116 ITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETT------QCVSFTR--INFPSAAHVV 166
+ G H++ +++ V S G G LGHG +++ FT I V
Sbjct: 193 VALGSEHSVAVTDGGEVLSWGGGGSGRLGHGHQSSLFGILRSNSEFTPRLIKELEGIKVT 252
Query: 167 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVP-CKQVTAGL 225
V+A H+A ++G F G+ S G R P ++ VP ++V G
Sbjct: 253 NVAAGLLHSACTDENGSAFMFGEKSINKMGFGGV-RNATTPSIISE---VPYAEEVACGG 308
Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYMLAV 284
T +T G ++T GSN +G LG T +P + P E +V Q++ G + A+
Sbjct: 309 YHTCVVTRGGELYTWGSNENGCLGTDSTYVSHSPVRVEGPFLE-STVSQVSCGWKHTAAI 367
Query: 285 TGNGVVYSFGSGSN---FC---------LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
+ N V +++G G + F LGHG D +P + K + V +S G
Sbjct: 368 SDNNV-FTWGWGGSHGTFSVDGHSSGGQLGHGSDVDYARPAMVDL--GKNVRAVHISCGF 424
Query: 333 EHVVAL 338
H A+
Sbjct: 425 NHTAAV 430
Score = 130 (50.8 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 49/172 (28%), Positives = 76/172 (44%)
Query: 180 QSGQVFTC----GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 235
+SG+ F GD G+ D+ + P + AL V G T FLT
Sbjct: 45 ESGKRFAAMWGSGDYGRLGLGNLDSQ---WTPAVCSALSDHSITAVACGGAHTLFLTETR 101
Query: 236 HVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
V G N GQLG D P ++ L++ ++ I+AG + A+T +G +Y +G
Sbjct: 102 RVFATGLNDCGQLGVSDVKSHAMDPLEVSGLDK--DILHISAGYYHSAAITVDGELYMWG 159
Query: 295 SGSNFCLGHGEQHDELQ--PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
S+ LG G++ + P ++ GI + V+ G EH VA+ G V
Sbjct: 160 KNSSGQLGLGKKAARVVRVPTKVEALH--GITIQSVALGSEHSVAVTDGGEV 209
>DICTYBASE|DDB_G0269934 [details] [associations]
symbol:DDB_G0269934 "Ras GTPase activation
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0051056 "regulation of small GTPase mediated signal
transduction" evidence=IEA] [GO:0043547 "positive regulation of
GTPase activity" evidence=IEA] [GO:0035023 "regulation of Rho
protein signal transduction" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005096 "GTPase activator activity" evidence=IEA]
[GO:0005089 "Rho guanyl-nucleotide exchange factor activity"
evidence=IEA] InterPro:IPR000219 InterPro:IPR001936
InterPro:IPR008936 Pfam:PF00616 Pfam:PF00621 PROSITE:PS50010
PROSITE:PS50018 SMART:SM00323 dictyBase:DDB_G0269934
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0007165 EMBL:AAFI02000005
GO:GO:0005096 GO:GO:0043547 SUPFAM:SSF48350 GO:GO:0005622
GO:GO:0005089 Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 Gene3D:1.10.506.10 eggNOG:COG5261
RefSeq:XP_646416.1 ProteinModelPortal:Q55CR5
EnsemblProtists:DDB0233497 GeneID:8617373 KEGG:ddi:DDB_G0269934
InParanoid:Q55CR5 OMA:SHTEYEN Uniprot:Q55CR5
Length = 2044
Score = 201 (75.8 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 67/235 (28%), Positives = 110/235 (46%)
Query: 116 ITTGRYHT-LLISNSSVFSCG-----SSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
I++G Y++ +L N V+ G + +LG Q + F S + VV VS
Sbjct: 754 ISSGSYYSSVLTENGDVYLWGRGAVKTPAVPILGIPQIEDQLLPF---KLESLSDVVSVS 810
Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
H A V +G++ T G + GH DTN I P+++++L QV G T
Sbjct: 811 IGFCHGAAVRANGELLTWGVGENGQLGHGDTNNQI-EPKIIQSLTSFWITQVQCGEKHTI 869
Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
LT G V++ G++ +GQLG GD +P ++ LE+ +V+QIA+G ++ +T +
Sbjct: 870 CLTKNGKVYSWGASEYGQLGLGDVTQHSSPMQVSALEKY-NVLQIASGSTHCAVLTTSKE 928
Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
V FG+G+ G P + + K +H+ R+ G A+ G V
Sbjct: 929 VLVFGNGAAM----GAASVVSLPTLVPSL--KYLHIDRLCCGHYSTAAITECGDV 977
Score = 175 (66.7 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 59/242 (24%), Positives = 103/242 (42%)
Query: 107 VETSAGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV 165
+E+ + + ++ G H + +N + + G G LGHG +T + I ++ +
Sbjct: 800 LESLSDVVSVSIGFCHGAAVRANGELLTWGVGENGQLGHG-DTNNQIEPKIIQSLTSFWI 858
Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
QV E H + ++G+V++ G + G D + P V AL+ Q+ +G
Sbjct: 859 TQVQCGEKHTICLTKNGKVYSWGASEYGQLGLGDVTQHS-SPMQVSALEKYNVLQIASGS 917
Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
LT V G+ +G + PT + P + + ++ G A+T
Sbjct: 918 THCAVLTTSKEVLVFGNGA--AMGAASVVSLPT---LVPSLKYLHIDRLCCGHYSTAAIT 972
Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVS 345
G VY++G+G LGHG E P+ I+ R + I ++S G H L SG +
Sbjct: 973 ECGDVYTWGTGQE--LGHGGNSTETSPKLIEALRNQSIR--QISCGGRHTAFLTDSGRIF 1028
Query: 346 LC 347
C
Sbjct: 1029 TC 1030
Score = 155 (59.6 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 53/189 (28%), Positives = 88/189 (46%)
Query: 105 DIVETSAGNMQITT-GRYHTLLISNSSVFSCG----SSLCGVLGHGPE--TTQCVSFTRI 157
D+ + S+ MQ++ +Y+ L I++ S C S V G+G VS +
Sbjct: 892 DVTQHSSP-MQVSALEKYNVLQIASGSTH-CAVLTTSKEVLVFGNGAAMGAASVVSLPTL 949
Query: 158 NFPSAA--HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
PS H+ ++ A + + G V+T G GH N P+L+EAL+
Sbjct: 950 -VPSLKYLHIDRLCCGHYSTAAITECGDVYTWGTGQEL--GHGG-NSTETSPKLIEALRN 1005
Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
+Q++ G T FLT G + TCG ++ GQLG D+ PK I L + + + ++
Sbjct: 1006 QSIRQISCGGRHTAFLTDSGRIFTCGKDSFGQLGQMSG-DQNKPKRIESLTKT-TFISVS 1063
Query: 276 AGPSYMLAV 284
G +Y +A+
Sbjct: 1064 CGENYNVAL 1072
Score = 151 (58.2 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 61/233 (26%), Positives = 107/233 (45%)
Query: 127 SNSSVFSCGSS-LCGVL----GHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQS 181
SN ++ SC +S L VL G TT F+ + P +S++ + +A L +
Sbjct: 654 SNIAISSCSASNLSNVLADNSGSSTGTTPTDGFS--SSPPNGQSPSLSSTAHRSAIHLDT 711
Query: 182 GQ-VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG--VP--CKQVTAGLNFTGFLTIRGH 236
+ + T G S+ G + T + +P E L +P C +++G ++ LT G
Sbjct: 712 SRGLMTWGSASNCKLGFKVTAKDQSQPT-PERLPNFNIPDICS-ISSGSYYSSVLTENGD 769
Query: 237 VHTCGSNTHGQ-----LGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
V+ G LG D+ P LE + VV ++ G + AV NG +
Sbjct: 770 VYLWGRGAVKTPAVPILGIPQIEDQLLPFK---LESLSDVVSVSIGFCHGAAVRANGELL 826
Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
++G G N LGHG+ +++++P+ IQ+ + +V G++H + L +G V
Sbjct: 827 TWGVGENGQLGHGDTNNQIEPKIIQSLT--SFWITQVQCGEKHTICLTKNGKV 877
Score = 49 (22.3 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 15/66 (22%), Positives = 34/66 (51%)
Query: 265 LEEVGSVVQIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 323
+ +V +++ I PS M + T N V + S S+ +++D ++ A+Q F++
Sbjct: 1282 VNKVTNILNITQSPSSMASYTTSNPTVTAVSSSSSENSEFLKEYD-IKLEALQNFKKTCT 1340
Query: 324 HVVRVS 329
+++ S
Sbjct: 1341 KIIKSS 1346
>UNIPROTKB|Q9N1T2 [details] [associations]
symbol:RPGR "X-linked retinitis pigmentosa GTPase
regulator" species:9615 "Canis lupus familiaris" [GO:0036126 "sperm
flagellum" evidence=ISS] [GO:0036064 "cilium basal body"
evidence=ISS] [GO:0042073 "intraflagellar transport" evidence=ISS]
[GO:0042384 "cilium assembly" evidence=ISS] [GO:0005813
"centrosome" evidence=ISS] [GO:0007601 "visual perception"
evidence=ISS] [GO:0005794 "Golgi apparatus" evidence=ISS]
[GO:0035085 "cilium axoneme" evidence=IEA] [GO:0050896 "response to
stimulus" evidence=IEA] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005794 GO:GO:0005813 GO:GO:0007601 GO:GO:0050896
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085
GO:GO:0042384 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0042073 eggNOG:COG5184 GO:GO:0036064
GO:GO:0036126 EMBL:AF148798 EMBL:AF148799 EMBL:AF148800
EMBL:AF148801 RefSeq:NP_001003126.1 UniGene:Cfa.3592
ProteinModelPortal:Q9N1T2 STRING:Q9N1T2 GeneID:403726
KEGG:cfa:403726 CTD:6103 HOGENOM:HOG000231314 HOVERGEN:HBG026899
InParanoid:Q9N1T2 NextBio:20817229 Uniprot:Q9N1T2
Length = 1003
Score = 197 (74.4 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 66/229 (28%), Positives = 110/229 (48%)
Query: 119 GRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINF-PSAAHVVQVSASENHAA 176
GR HTL+ + V++ G + G LG G +T + +F I+F S + Q+SA N +A
Sbjct: 95 GRNHTLVSTEGGKVYAAGGNNEGQLGLG-DTEERSTFHLISFFTSQRKIKQLSAGSNTSA 153
Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
+ + G++F GDNS G + + P+ V G P ++ G + F+T G
Sbjct: 154 ALTEDGELFMWGDNSEGQIGLENVTN-VCVPQQVTV--GKPISWISCGYYHSAFVTTEGQ 210
Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
++T G G+LG + L + P+ + + G VVQ+A G + + +T V Y+FG
Sbjct: 211 LYTFGEPECGKLGLPNQLLVNHRMPQPVPGIP--GKVVQVACGGGHTVVLTEKAV-YTFG 267
Query: 295 SGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
G LG G E P+AI+ + + I + + G+ H + G
Sbjct: 268 LGQFGQLGLGTFLFETSVPKAIEHIKDQKISFI--ACGENHTALITDMG 314
Score = 168 (64.2 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 65/230 (28%), Positives = 104/230 (45%)
Query: 115 QITTG-RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCV-SFTRINFPSAAHVVQVSASE 172
Q++ G L + +F G + G +G T CV + P + +S
Sbjct: 144 QLSAGSNTSAALTEDGELFMWGDNSEGQIGLENVTNVCVPQQVTVGKP----ISWISCGY 199
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCK--QVTAGLNFTG 229
H+AFV GQ++T G+ CG N+ + R+ + + G+P K QV G T
Sbjct: 200 YHSAFVTTEGQLYTFGEPE---CGKLGLPNQLLVNHRMPQPVPGIPGKVVQVACGGGHTV 256
Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
LT + V+T G GQLG G L + PK+I +++ + IA G ++ +T G
Sbjct: 257 VLTEKA-VYTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQ-KISFIACGENHTALITDMG 314
Query: 289 VVYSFGSGSNFCLGHGEQHDELQ--PRAIQTFRRKGIHVVRVSAGDEHVV 336
++Y+FG G + LG G ++ Q P F R + +V S G H +
Sbjct: 315 LMYTFGDGRHGKLGLGLENSTNQFIPTLCSNFLRFIVQLV--SCGGCHTL 362
Score = 151 (58.2 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 61/229 (26%), Positives = 99/229 (43%)
Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
++ G HT +++ N+ ++ GS+ G LG G ++T T + V + NH
Sbjct: 40 LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKP-TCVKALKPEKVKFAACGRNH 98
Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGV-PCKQVTAGLNFTGFLT 232
+ G+V+ G N+ G DT R F L+ KQ++AG N + LT
Sbjct: 99 TLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFH--LISFFTSQRKIKQLSAGSNTSAALT 156
Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNGVVY 291
G + G N+ GQ+G + + P+ + VG + I+ G + VT G +Y
Sbjct: 157 EDGELFMWGDNSEGQIGLENVTNVCVPQQVT----VGKPISWISCGYYHSAFVTTEGQLY 212
Query: 292 SFGSGSNFCLGHGEQH--DELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
+FG LG Q + P+ + K VV+V+ G H V L
Sbjct: 213 TFGEPECGKLGLPNQLLVNHRMPQPVPGIPGK---VVQVACGGGHTVVL 258
>UNIPROTKB|F1NXV1 [details] [associations]
symbol:IBTK "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0030292 "protein tyrosine kinase inhibitor activity"
evidence=IEA] [GO:0051209 "release of sequestered calcium ion into
cytosol" evidence=IEA] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088 PROSITE:PS50097
SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005737 GO:GO:0051209 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 GO:GO:0030292 OMA:VSALHHK
GeneTree:ENSGT00700000104160 EMBL:AADN02002424 EMBL:AADN02002425
IPI:IPI00590269 Ensembl:ENSGALT00000025575 Uniprot:F1NXV1
Length = 1359
Score = 198 (74.8 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 64/224 (28%), Positives = 101/224 (45%)
Query: 129 SSVFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSASENHAAFVLQSGQVFTC 187
+ V++ G+++ LGHG + ++ FP ++ ++ QV + H+ F+ GQ++TC
Sbjct: 145 TEVYTWGNNINFTLGHGGQQSKHHPELVDLFPRNSVYIKQVVLCKFHSVFLSHKGQIYTC 204
Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
G GH D + PRLVE L C Q+ A + T LT G V+T G NT Q
Sbjct: 205 GHGQGGRLGHGDEQTCLV-PRLVEGLSSHQCSQIAAAKDHTVVLTEDGCVYTFGLNTFHQ 263
Query: 248 LGH-GDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLAVTGNGVVYSFG-SGSN--FCLG 302
LG + P+ + G V+ +AAG + + T V Y+ G +G + L
Sbjct: 264 LGILPPPANCSVPRQVQAKNLKGRMVIGVAAGRFHTVLWTKEAV-YTMGLNGGQLGYLLD 322
Query: 303 HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSL 346
+ PR + K + V VSA D V + G + L
Sbjct: 323 PNGEKCVTAPRQVSALHHKDVSVSLVSASDGATVCVTERGDIYL 366
Score = 148 (57.2 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 58/208 (27%), Positives = 95/208 (45%)
Query: 98 QSVEHSSDIVETSAGNM----QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCV 152
Q +H ++V+ N Q+ ++H++ +S+ +++CG G LGHG E T C+
Sbjct: 163 QQSKHHPELVDLFPRNSVYIKQVVLCKFHSVFLSHKGQIYTCGHGQGGRLGHGDEQT-CL 221
Query: 153 SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA 212
+ S+ Q++A+++H + + G V+T G N+ G PR V+A
Sbjct: 222 VPRLVEGLSSHQCSQIAAAKDHTVVLTEDGCVYTFGLNTFHQLGILPPPANCSVPRQVQA 281
Query: 213 --LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR------PTPKSIAP 264
LKG V AG F L + V+T G N GQLG+ LD P+ ++
Sbjct: 282 KNLKGRMVIGVAAG-RFHTVLWTKEAVYTMGLNG-GQLGY--LLDPNGEKCVTAPRQVSA 337
Query: 265 LEEVG-SVVQIAAGPSYMLAVTGNGVVY 291
L SV ++A + VT G +Y
Sbjct: 338 LHHKDVSVSLVSASDGATVCVTERGDIY 365
>RGD|1306897 [details] [associations]
symbol:Nek8 "NIMA-related kinase 8" species:10116 "Rattus
norvegicus" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0072372
"primary cilium" evidence=IEA;ISO] InterPro:IPR000719
InterPro:IPR002290 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 RGD:1306897 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0072372
PRINTS:PR00633 PROSITE:PS50012 EMBL:CH473948 KO:K08857
GeneTree:ENSGT00700000104137 CTD:284086 OrthoDB:EOG4PZJ65
IPI:IPI00369945 RefSeq:NP_001099274.1 UniGene:Rn.144705
Ensembl:ENSRNOT00000017264 GeneID:287473 KEGG:rno:287473
NextBio:626264 Uniprot:D3ZGQ5
Length = 698
Score = 194 (73.4 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 63/199 (31%), Positives = 94/199 (47%)
Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFT-----CGDNS-SFCCGHRDTNRPIFRPRL 209
R+ P+ VVQV+A A V +SG++ G + G + +P F R
Sbjct: 332 RLPMPNT-EVVQVAAGRTQKAGVTRSGRLILWEAPPLGTGGGTLLPGAVELPQPQFVSRF 390
Query: 210 VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 269
+E GV K V G FT LT RG + T GS ++G LGHG D P + L +G
Sbjct: 391 LEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQPTIVEAL--LG 448
Query: 270 -SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 328
+VQ+A G S++LA++ +G ++++G G LG G + P+ + G RV
Sbjct: 449 YEMVQVACGASHVLALSADGELFAWGRGDGGRLGLGTRESHNCPQQVPMV--PGQEAQRV 506
Query: 329 SAGDEHVVALDSSGYVSLC 347
G + + L S G V C
Sbjct: 507 VCGIDCSMILTSPGRVLAC 525
Score = 182 (69.1 bits), Expect = 5.2e-11, P = 5.2e-11
Identities = 72/269 (26%), Positives = 116/269 (43%)
Query: 93 VLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCV 152
V RFL+ + I + G++ + L + + GS G LGHG T
Sbjct: 387 VSRFLEG-QSGVTIKHVACGDL------FTACLTDRGIIMTFGSGSNGCLGHG-SLTDIS 438
Query: 153 SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG--DNSSFCCGHRDTNRPIFRPRLV 210
T + +VQV+ +H + G++F G D G R+++ P+ V
Sbjct: 439 QPTIVEALLGYEMVQVACGASHVLALSADGELFAWGRGDGGRLGLGTRESHNC---PQQV 495
Query: 211 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTL---DRP---------- 257
+ G ++V G++ + LT G V CGSN +LG D L + P
Sbjct: 496 PMVPGQEAQRVVCGIDCSMILTSPGRVLACGSNRFNKLGL-DCLSLEEEPVPHQQVEEAL 554
Query: 258 --TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAI 315
TP APL+ +++ + G ++ AVT +G Y+FGS + LG + P +
Sbjct: 555 SFTPLGSAPLDRE-TLLCVDLGTAHSAAVTASGACYTFGSNQHGQLGTSSRRVSRAPCRV 613
Query: 316 QTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
Q +GI +V V+ GD VA+ + G V
Sbjct: 614 QGL--EGIKMVMVACGDAFTVAIGAEGEV 640
Score = 152 (58.6 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 61/229 (26%), Positives = 95/229 (41%)
Query: 106 IVETSAGN--MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGP-ETTQCVSFTRINFPS 161
IVE G +Q+ G H L +S + +F+ G G LG G E+ C ++
Sbjct: 442 IVEALLGYEMVQVACGASHVLALSADGELFAWGRGDGGRLGLGTRESHNCPQ--QVPMVP 499
Query: 162 AAHVVQVSASENHAAFVLQSGQVFTCGDNS----SFCCGHRDTNRPIFRPRLVEALKGVP 217
+V + + + G+V CG N C + P+ ++ EAL P
Sbjct: 500 GQEAQRVVCGIDCSMILTSPGRVLACGSNRFNKLGLDCLSLE-EEPVPHQQVEEALSFTP 558
Query: 218 CKQ----------VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE 267
V G + +T G +T GSN HGQLG P + LE
Sbjct: 559 LGSAPLDRETLLCVDLGTAHSAAVTASGACYTFGSNQHGQLGTSSRRVSRAPCRVQGLEG 618
Query: 268 VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
+ +V +A G ++ +A+ G VYS+G G+ LG ++ L PR +Q
Sbjct: 619 I-KMVMVACGDAFTVAIGAEGEVYSWGKGARGRLGRRDEDAGL-PRPVQ 665
>UNIPROTKB|E9PMV6 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
PANTHER:PTHR22870:SF7 HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058
EMBL:AC124078 IPI:IPI00976302 ProteinModelPortal:E9PMV6 SMR:E9PMV6
Ensembl:ENST00000529728 ArrayExpress:E9PMV6 Bgee:E9PMV6
Uniprot:E9PMV6
Length = 229
Score = 170 (64.9 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 61/189 (32%), Positives = 85/189 (44%)
Query: 124 LLISNSSVFSCGSSLCGVLG--HGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQS 181
+L N V SCGS+ G LG HGP +CV I VV ++A HA S
Sbjct: 1 MLTENGQVLSCGSNSFGQLGVPHGPR--RCVVPQAIELHKEK-VVCIAAGLRHAVAATAS 57
Query: 182 GQVFTCGDNSSFCCGHR---DTNRPIF----RPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
G VF G + CG R P+F P V L+ V AG + + LT
Sbjct: 58 GIVFQWGTGLA-SCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDA 116
Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
G V+ GSN HGQL + + P P+ I A + V I +G ++++A T G ++++
Sbjct: 117 GEVYVWGSNKHGQLAN-EAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTW 175
Query: 294 GSGSNFCLG 302
G LG
Sbjct: 176 GRADYGQLG 184
>UNIPROTKB|E1BRZ2 [details] [associations]
symbol:NEK8 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0072372
"primary cilium" evidence=IEA] InterPro:IPR000719
InterPro:IPR002290 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0072372 PRINTS:PR00633
PROSITE:PS50012 GeneTree:ENSGT00700000104137 OMA:EREVFAW
EMBL:AADN02025864 IPI:IPI00574044 ProteinModelPortal:E1BRZ2
Ensembl:ENSGALT00000006340 Uniprot:E1BRZ2
Length = 689
Score = 193 (73.0 bits), Expect = 2.9e-12, P = 2.9e-12
Identities = 63/173 (36%), Positives = 87/173 (50%)
Query: 155 TRINFPSA-AHVVQVSASENHAAFVLQSGQVF--------TCGDNSSFCCGHRDTNRPIF 205
T + P VVQVSA A V +SG++ T G S G + +P F
Sbjct: 329 TPLRLPMLNTEVVQVSAGRTQKAGVTKSGRLIMWEAPPMGTAGGPS--LPGATEQLQPQF 386
Query: 206 RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 265
R +E GV K V+ G FT LT RG + T GS ++G LGHG+ D PK + L
Sbjct: 387 VSRFLEGQSGVTIKHVSCGDLFTACLTDRGIIMTFGSGSNGCLGHGNFTDVSQPKIVEAL 446
Query: 266 EEVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG--EQHDELQPRAI 315
+G +VQ+A G S++LAV+ V+++G G N LG G E H+ Q A+
Sbjct: 447 --LGYEMVQVACGASHVLAVSNEREVFAWGRGDNGRLGLGTLECHNSPQQVAV 497
Score = 151 (58.2 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 62/228 (27%), Positives = 97/228 (42%)
Query: 106 IVETSAGN--MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCV-SFTRINFPS 161
IVE G +Q+ G H L +SN VF+ G G LG G T +C S ++ P
Sbjct: 442 IVEALLGYEMVQVACGASHVLAVSNEREVFAWGRGDNGRLGLG--TLECHNSPQQVAVPP 499
Query: 162 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCG-HR--DTNRPIFRPRLVEAL----- 213
+V + + + + Q+ CG N G R P ++ EA
Sbjct: 500 EHEAQRVICGIDSSMVLTVNNQILACGSNRCNKLGLDRISSAEEPSPEDQVEEATVFTCA 559
Query: 214 KGVPCKQ---VTA--GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 268
+ P Q V A G + +T G +T GSN HGQLG + P + L +
Sbjct: 560 QSAPLNQEPVVCADIGTAHSAAVTASGQCYTFGSNQHGQLGTNSCRNSRVPHLVVGLRAM 619
Query: 269 GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
V +A G ++ +A+ +G V ++G G+ LG ++ + PR +Q
Sbjct: 620 -KVTVVACGDAFTVAIGADGEVCTWGKGARGRLGRKDEETGM-PRPVQ 665
Score = 149 (57.5 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 70/269 (26%), Positives = 110/269 (40%)
Query: 93 VLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCV 152
V RFL+ + I S G++ + L + + GS G LGHG T V
Sbjct: 387 VSRFLEG-QSGVTIKHVSCGDL------FTACLTDRGIIMTFGSGSNGCLGHGNFTD--V 437
Query: 153 SFTRINFPSAAH-VVQVSASENHAAFVLQSGQVFTCG--DNSSFCCGHRDTNRPIFRPRL 209
S +I + +VQV+ +H V +VF G DN G + + P+
Sbjct: 438 SQPKIVEALLGYEMVQVACGASHVLAVSNEREVFAWGRGDNGRLGLGTLECHNS---PQQ 494
Query: 210 VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG--DTLDRPTPKS------ 261
V ++V G++ + LT+ + CGSN +LG + + P+P+
Sbjct: 495 VAVPPEHEAQRVICGIDSSMVLTVNNQILACGSNRCNKLGLDRISSAEEPSPEDQVEEAT 554
Query: 262 ------IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAI 315
APL + VV G ++ AVT +G Y+FGS + LG + P +
Sbjct: 555 VFTCAQSAPLNQE-PVVCADIGTAHSAAVTASGQCYTFGSNQHGQLGTNSCRNSRVPHLV 613
Query: 316 QTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
R + VV + GD VA+ + G V
Sbjct: 614 VGLRAMKVTVV--ACGDAFTVAIGADGEV 640
Score = 131 (51.2 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 39/128 (30%), Positives = 66/128 (51%)
Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT----PKSIAP-LE-EVGSVVQ 273
QV+AG +T G + + G G G +L T P+ ++ LE + G ++
Sbjct: 342 QVSAGRTQKAGVTKSGRLIMWEAPPMGTAG-GPSLPGATEQLQPQFVSRFLEGQSGVTIK 400
Query: 274 -IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
++ G + +T G++ +FGSGSN CLGHG D QP+ ++ G +V+V+ G
Sbjct: 401 HVSCGDLFTACLTDRGIIMTFGSGSNGCLGHGNFTDVSQPKIVEALL--GYEMVQVACGA 458
Query: 333 EHVVALDS 340
HV+A+ +
Sbjct: 459 SHVLAVSN 466
>MGI|MGI:1918677 [details] [associations]
symbol:Ibtk "inhibitor of Bruton agammaglobulinemia tyrosine
kinase" species:10090 "Mus musculus" [GO:0001933 "negative
regulation of protein phosphorylation" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0016020 "membrane" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=ISO] [GO:0030292
"protein tyrosine kinase inhibitor activity" evidence=ISO]
[GO:0051209 "release of sequestered calcium ion into cytosol"
evidence=ISO] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=ISO] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 MGI:MGI:1918677
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
GO:GO:0016020 GO:GO:0051209 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 EMBL:CH466522
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GO:GO:0030292 CTD:25998 HOVERGEN:HBG081779 OMA:VSALHHK
OrthoDB:EOG4J6RQ1 ChiTaRS:IBTK EMBL:BC137798 EMBL:AK030895
EMBL:AK077387 EMBL:AK129353 IPI:IPI00660767 IPI:IPI00750982
RefSeq:NP_001074751.1 UniGene:Mm.22315 UniGene:Mm.487092
ProteinModelPortal:Q6ZPR6 SMR:Q6ZPR6 PhosphoSite:Q6ZPR6
PaxDb:Q6ZPR6 PRIDE:Q6ZPR6 Ensembl:ENSMUST00000039213 GeneID:108837
KEGG:mmu:108837 GeneTree:ENSGT00700000104160 HOGENOM:HOG000090207
InParanoid:Q6ZPR6 NextBio:361375 Bgee:Q6ZPR6 Genevestigator:Q6ZPR6
Uniprot:Q6ZPR6
Length = 1352
Score = 196 (74.1 bits), Expect = 3.3e-12, P = 3.3e-12
Identities = 71/227 (31%), Positives = 102/227 (44%)
Query: 129 SSVFSCGSSLCGVLGHGPETTQC-VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
+ V++ G + LGHG + ++ + S +V QV + H+ F+ Q GQV+TC
Sbjct: 142 TEVYTWGDNTNFTLGHGSQNSKHHPELLDLFSRSGVYVKQVVLCKFHSVFLSQKGQVYTC 201
Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
G GH D + PRLVE L G C QV A + T LT G V+T G N Q
Sbjct: 202 GHGRGGRLGHGDEQTCLV-PRLVEGLSGHNCSQVAAAKDHTVVLTDDGCVYTFGLNMFHQ 260
Query: 248 LGH-GDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFG-SGSNFCLGH- 303
LG P+ I G +++ +AAG + + T V Y+ G +G LGH
Sbjct: 261 LGIIPPPASCNVPRQIQAKYLKGRTIIGVAAGRFHTVLWTREAV-YTLGLNGGQ--LGHL 317
Query: 304 ----GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSL 346
GE+ PR + K I V V+A D V + + G + L
Sbjct: 318 LDPNGEKC-VTTPRQVSALHHKDIAVSLVAASDGATVCVTTRGDIYL 363
Score = 155 (59.6 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 58/187 (31%), Positives = 84/187 (44%)
Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
Q+ ++H++ +S V++CG G LGHG E T C+ + S + QV+A+++
Sbjct: 181 QVVLCKFHSVFLSQKGQVYTCGHGRGGRLGHGDEQT-CLVPRLVEGLSGHNCSQVAAAKD 239
Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA--LKGVPCKQVTAGLNFTGFL 231
H + G V+T G N G PR ++A LKG V AG F L
Sbjct: 240 HTVVLTDDGCVYTFGLNMFHQLGIIPPPASCNVPRQIQAKYLKGRTIIGVAAG-RFHTVL 298
Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDR------PTPKSIAPLEEVGSVVQ-IAAGPSYMLAV 284
R V+T G N GQLGH LD TP+ ++ L V +AA + V
Sbjct: 299 WTREAVYTLGLNG-GQLGH--LLDPNGEKCVTTPRQVSALHHKDIAVSLVAASDGATVCV 355
Query: 285 TGNGVVY 291
T G +Y
Sbjct: 356 TTRGDIY 362
>MGI|MGI:1890646 [details] [associations]
symbol:Nek8 "NIMA (never in mitosis gene a)-related
expressed kinase 8" species:10090 "Mus musculus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004672 "protein kinase
activity" evidence=IEA] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005929 "cilium" evidence=IEA] [GO:0006468 "protein
phosphorylation" evidence=IEA] [GO:0016301 "kinase activity"
evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0042995 "cell projection" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0072372 "primary
cilium" evidence=IDA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 MGI:MGI:1890646 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005524 GO:GO:0005737 GO:GO:0005856 GO:GO:0046872
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0072372 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 KO:K08857
GeneTree:ENSGT00700000104137 CTD:284086 HOGENOM:HOG000006908
HOVERGEN:HBG098799 OMA:EREVFAW OrthoDB:EOG4PZJ65 EMBL:AF407579
EMBL:AK154358 EMBL:BC070457 IPI:IPI00135930 RefSeq:NP_543125.1
UniGene:Mm.23788 ProteinModelPortal:Q91ZR4 SMR:Q91ZR4 IntAct:Q91ZR4
MINT:MINT-1341145 STRING:Q91ZR4 PhosphoSite:Q91ZR4 PRIDE:Q91ZR4
Ensembl:ENSMUST00000017549 GeneID:140859 KEGG:mmu:140859
InParanoid:Q91ZR4 NextBio:370021 Bgee:Q91ZR4 Genevestigator:Q91ZR4
GermOnline:ENSMUSG00000017405 Uniprot:Q91ZR4
Length = 698
Score = 192 (72.6 bits), Expect = 3.8e-12, P = 3.8e-12
Identities = 60/190 (31%), Positives = 90/190 (47%)
Query: 165 VVQVSASENHAAFVLQSGQVFTC------GDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
VVQV+A A V +SG++ + G + +P F R +E GV
Sbjct: 340 VVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGGTLLPGAVELPQPQFVSRFLEGQSGVTI 399
Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG 277
K V G FT LT RG + T GS ++G LGHG+ D P + L +G +VQ+A G
Sbjct: 400 KHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGNLTDISQPTIVEAL--LGYEMVQVACG 457
Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
S++LA++ +G ++++G G LG G + P+ + G RV G + +
Sbjct: 458 ASHVLALSTDGELFAWGRGDGGRLGLGTRESHNCPQQVPV--APGQEAQRVVCGIDSSMI 515
Query: 338 LDSSGYVSLC 347
L S G V C
Sbjct: 516 LTSPGRVLAC 525
Score = 180 (68.4 bits), Expect = 8.8e-11, P = 8.8e-11
Identities = 70/268 (26%), Positives = 114/268 (42%)
Query: 93 VLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCV 152
V RFL+ + I + G++ + L + + GS G LGHG T
Sbjct: 387 VSRFLEG-QSGVTIKHVACGDL------FTACLTDRGIIMTFGSGSNGCLGHG-NLTDIS 438
Query: 153 SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG--DNSSFCCGHRDTNRPIFRPRLV 210
T + +VQV+ +H + G++F G D G R+++ P+ V
Sbjct: 439 QPTIVEALLGYEMVQVACGASHVLALSTDGELFAWGRGDGGRLGLGTRESHNC---PQQV 495
Query: 211 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG--HGDTLDRP----------- 257
G ++V G++ + LT G V CGSN +LG H + P
Sbjct: 496 PVAPGQEAQRVVCGIDSSMILTSPGRVLACGSNRFNKLGLDHLSLDEEPVPYQQVEEALS 555
Query: 258 -TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
TP APL++ ++ + G ++ A+T +G Y+FGS + LG + P +Q
Sbjct: 556 FTPLGSAPLDQE-PLLCVDLGTAHSAAITASGDCYTFGSNQHGQLGTSSRRVSRAPCRVQ 614
Query: 317 TFRRKGIHVVRVSAGDEHVVALDSSGYV 344
+GI +V V+ GD VA+ + G V
Sbjct: 615 GL--EGIKMVMVACGDAFTVAVGAEGEV 640
Score = 163 (62.4 bits), Expect = 7.2e-09, P = 7.2e-09
Identities = 64/228 (28%), Positives = 97/228 (42%)
Query: 106 IVETSAGN--MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGP-ETTQCVSFTRINFPS 161
IVE G +Q+ G H L +S + +F+ G G LG G E+ C ++
Sbjct: 442 IVEALLGYEMVQVACGASHVLALSTDGELFAWGRGDGGRLGLGTRESHNCPQ--QVPVAP 499
Query: 162 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCG--HRDTNR-PIFRPRLVEALK---- 214
+V + + + G+V CG N G H + P+ ++ EAL
Sbjct: 500 GQEAQRVVCGIDSSMILTSPGRVLACGSNRFNKLGLDHLSLDEEPVPYQQVEEALSFTPL 559
Query: 215 -GVPCKQ-----VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 268
P Q V G + +T G +T GSN HGQLG P + LE +
Sbjct: 560 GSAPLDQEPLLCVDLGTAHSAAITASGDCYTFGSNQHGQLGTSSRRVSRAPCRVQGLEGI 619
Query: 269 GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
+V +A G ++ +AV G VYS+G G+ LG ++ L PR +Q
Sbjct: 620 -KMVMVACGDAFTVAVGAEGEVYSWGKGTRGRLGRRDEDAGL-PRPVQ 665
>UNIPROTKB|E9PDR5 [details] [associations]
symbol:IBTK "Inhibitor of Bruton tyrosine kinase"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PROSITE:PS50012 EMBL:AL050333
HGNC:HGNC:17853 ChiTaRS:IBTK IPI:IPI00964822
ProteinModelPortal:E9PDR5 SMR:E9PDR5 Ensembl:ENST00000503631
UCSC:uc011dyw.1 ArrayExpress:E9PDR5 Bgee:E9PDR5 Uniprot:E9PDR5
Length = 1152
Score = 194 (73.4 bits), Expect = 4.6e-12, P = 4.6e-12
Identities = 69/228 (30%), Positives = 104/228 (45%)
Query: 129 SSVFSCGSSLCGVLGHGPETTQC-VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
+ V++ G + LGHG + ++ + S ++ QV + H+ F+ Q GQV+TC
Sbjct: 142 TDVYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTC 201
Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
G GH D + PRLVE L G C QV A + T LT G V+T G N Q
Sbjct: 202 GHGPGGRLGHGDEQTCLV-PRLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQ 260
Query: 248 LGHGDTLDRPT----PKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFG--SGSNFC 300
LG + P+ P+ I G +++ +AAG + + T V Y+ G G C
Sbjct: 261 LG---IIPPPSSCNVPRQIQAKYLKGRTIIGVAAGRFHTVLWTREAV-YTMGLNGGQLGC 316
Query: 301 L--GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSL 346
L +GE+ PR + K I + V+A D V + + G + L
Sbjct: 317 LLDPNGEKC-VTAPRQVSALHHKDIALSLVAASDGATVCVTTRGDIYL 363
Score = 139 (54.0 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 56/207 (27%), Positives = 94/207 (45%)
Query: 98 QSVEHSSDIVETSAGN----MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCV 152
Q+ +H ++V+ + + Q+ ++H++ +S V++CG G LGHG E T C+
Sbjct: 160 QNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGHGPGGRLGHGDEQT-CL 218
Query: 153 SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA 212
+ + + QV+A+++H + + G V+T G N G PR ++A
Sbjct: 219 VPRLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQLGIIPPPSSCNVPRQIQA 278
Query: 213 --LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-----HGDTLDRPTPKSIAPL 265
LKG V AG F L R V+T G N GQLG +G+ P+ ++ L
Sbjct: 279 KYLKGRTIIGVAAG-RFHTVLWTREAVYTMGLNG-GQLGCLLDPNGEKCVT-APRQVSAL 335
Query: 266 EEVGSVVQ-IAAGPSYMLAVTGNGVVY 291
+ +AA + VT G +Y
Sbjct: 336 HHKDIALSLVAASDGATVCVTTRGDIY 362
>UNIPROTKB|E7EPI0 [details] [associations]
symbol:IBTK "Inhibitor of Bruton tyrosine kinase"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PROSITE:PS50012 EMBL:AL050333
HGNC:HGNC:17853 ChiTaRS:IBTK IPI:IPI00964356
ProteinModelPortal:E7EPI0 SMR:E7EPI0 Ensembl:ENST00000510291
UCSC:uc011dyv.1 ArrayExpress:E7EPI0 Bgee:E7EPI0 Uniprot:E7EPI0
Length = 1338
Score = 194 (73.4 bits), Expect = 5.6e-12, P = 5.6e-12
Identities = 69/228 (30%), Positives = 104/228 (45%)
Query: 129 SSVFSCGSSLCGVLGHGPETTQC-VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
+ V++ G + LGHG + ++ + S ++ QV + H+ F+ Q GQV+TC
Sbjct: 142 TDVYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTC 201
Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
G GH D + PRLVE L G C QV A + T LT G V+T G N Q
Sbjct: 202 GHGPGGRLGHGDEQTCLV-PRLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQ 260
Query: 248 LGHGDTLDRPT----PKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFG--SGSNFC 300
LG + P+ P+ I G +++ +AAG + + T V Y+ G G C
Sbjct: 261 LG---IIPPPSSCNVPRQIQAKYLKGRTIIGVAAGRFHTVLWTREAV-YTMGLNGGQLGC 316
Query: 301 L--GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSL 346
L +GE+ PR + K I + V+A D V + + G + L
Sbjct: 317 LLDPNGEKC-VTAPRQVSALHHKDIALSLVAASDGATVCVTTRGDIYL 363
Score = 139 (54.0 bits), Expect = 7.5e-06, P = 7.5e-06
Identities = 56/207 (27%), Positives = 94/207 (45%)
Query: 98 QSVEHSSDIVETSAGN----MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCV 152
Q+ +H ++V+ + + Q+ ++H++ +S V++CG G LGHG E T C+
Sbjct: 160 QNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGHGPGGRLGHGDEQT-CL 218
Query: 153 SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA 212
+ + + QV+A+++H + + G V+T G N G PR ++A
Sbjct: 219 VPRLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQLGIIPPPSSCNVPRQIQA 278
Query: 213 --LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-----HGDTLDRPTPKSIAPL 265
LKG V AG F L R V+T G N GQLG +G+ P+ ++ L
Sbjct: 279 KYLKGRTIIGVAAG-RFHTVLWTREAVYTMGLNG-GQLGCLLDPNGEKCVT-APRQVSAL 335
Query: 266 EEVGSVVQ-IAAGPSYMLAVTGNGVVY 291
+ +AA + VT G +Y
Sbjct: 336 HHKDIALSLVAASDGATVCVTTRGDIY 362
>UNIPROTKB|Q9P2D0 [details] [associations]
symbol:IBTK "Inhibitor of Bruton tyrosine kinase"
species:9606 "Homo sapiens" [GO:0016020 "membrane" evidence=IEA]
[GO:0001933 "negative regulation of protein phosphorylation"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0019901
"protein kinase binding" evidence=IDA] [GO:0030292 "protein
tyrosine kinase inhibitor activity" evidence=IDA] [GO:0051209
"release of sequestered calcium ion into cytosol" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=IDA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 GO:GO:0019901
GO:GO:0016020 Pathway_Interaction_DB:bcr_5pathway GO:GO:0051209
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GO:GO:0030292 EMBL:DQ005633 EMBL:DQ005634
EMBL:DQ005635 EMBL:AB037838 EMBL:AL050333 EMBL:BC027490
EMBL:BC038244 EMBL:BC042171 EMBL:BC113696 EMBL:BC113698
EMBL:AL050018 EMBL:AF235049 IPI:IPI00792333 IPI:IPI00829736
IPI:IPI00910313 PIR:T08705 RefSeq:NP_056340.2 UniGene:Hs.306425
ProteinModelPortal:Q9P2D0 SMR:Q9P2D0 IntAct:Q9P2D0 MINT:MINT-215747
STRING:Q9P2D0 PhosphoSite:Q9P2D0 DMDM:134034141 PaxDb:Q9P2D0
PRIDE:Q9P2D0 DNASU:25998 Ensembl:ENST00000306270 GeneID:25998
KEGG:hsa:25998 UCSC:uc003pjl.1 UCSC:uc003pjm.2 CTD:25998
GeneCards:GC06M082879 HGNC:HGNC:17853 HPA:HPA023826 MIM:606457
neXtProt:NX_Q9P2D0 PharmGKB:PA134898277 HOVERGEN:HBG081779
InParanoid:Q9P2D0 OMA:VSALHHK OrthoDB:EOG4J6RQ1 ChiTaRS:IBTK
GenomeRNAi:25998 NextBio:47714 ArrayExpress:Q9P2D0 Bgee:Q9P2D0
Genevestigator:Q9P2D0 Uniprot:Q9P2D0
Length = 1353
Score = 194 (73.4 bits), Expect = 5.7e-12, P = 5.7e-12
Identities = 69/228 (30%), Positives = 104/228 (45%)
Query: 129 SSVFSCGSSLCGVLGHGPETTQC-VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
+ V++ G + LGHG + ++ + S ++ QV + H+ F+ Q GQV+TC
Sbjct: 142 TDVYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTC 201
Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
G GH D + PRLVE L G C QV A + T LT G V+T G N Q
Sbjct: 202 GHGPGGRLGHGDEQTCLV-PRLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQ 260
Query: 248 LGHGDTLDRPT----PKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFG--SGSNFC 300
LG + P+ P+ I G +++ +AAG + + T V Y+ G G C
Sbjct: 261 LG---IIPPPSSCNVPRQIQAKYLKGRTIIGVAAGRFHTVLWTREAV-YTMGLNGGQLGC 316
Query: 301 L--GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSL 346
L +GE+ PR + K I + V+A D V + + G + L
Sbjct: 317 LLDPNGEKC-VTAPRQVSALHHKDIALSLVAASDGATVCVTTRGDIYL 363
Score = 139 (54.0 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 56/207 (27%), Positives = 94/207 (45%)
Query: 98 QSVEHSSDIVETSAGN----MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCV 152
Q+ +H ++V+ + + Q+ ++H++ +S V++CG G LGHG E T C+
Sbjct: 160 QNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGHGPGGRLGHGDEQT-CL 218
Query: 153 SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA 212
+ + + QV+A+++H + + G V+T G N G PR ++A
Sbjct: 219 VPRLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQLGIIPPPSSCNVPRQIQA 278
Query: 213 --LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-----HGDTLDRPTPKSIAPL 265
LKG V AG F L R V+T G N GQLG +G+ P+ ++ L
Sbjct: 279 KYLKGRTIIGVAAG-RFHTVLWTREAVYTMGLNG-GQLGCLLDPNGEKCVT-APRQVSAL 335
Query: 266 EEVGSVVQ-IAAGPSYMLAVTGNGVVY 291
+ +AA + VT G +Y
Sbjct: 336 HHKDIALSLVAASDGATVCVTTRGDIY 362
>UNIPROTKB|I3LCV3 [details] [associations]
symbol:RCBTB1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104208 OMA:NCSNCLG
EMBL:FP325140 Ensembl:ENSSSCT00000023143 Uniprot:I3LCV3
Length = 560
Score = 189 (71.6 bits), Expect = 5.7e-12, P = 5.7e-12
Identities = 59/216 (27%), Positives = 90/216 (41%)
Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
N VF G + LG G + V ++ + +S S H + G V+
Sbjct: 69 NDEVFVFGLNYSNCLGTGDNQSTLVP-KKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYA 127
Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
G N G+ TN+ I ++ L +V G + + L G V G N G
Sbjct: 128 WGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 187
Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
Q+G G T ++PTP+ + + VV IA G + +AV NG VY +G N LG G
Sbjct: 188 QVGSGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNN 247
Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
++L P + + V ++ G H +AL G
Sbjct: 248 GNQLTPVRVAALH--SVCVNQIVCGYAHTLALTDEG 281
Score = 174 (66.3 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 58/195 (29%), Positives = 91/195 (46%)
Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
+++ G +H++ L ++ VF+ G + CG +G G Q N VV ++ +
Sbjct: 160 VEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQ 219
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
+ VL +G+V+ G N + G + + P V AL V Q+ G T LT
Sbjct: 220 TSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL-TPVRVAALHSVCVNQIVCGYAHTLALT 278
Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY--MLAVTGNGVV 290
G ++ G+NT+GQLG G+ + +P I + E VV+IAA S A T G V
Sbjct: 279 DEGLLYAWGANTYGQLGTGNKNNLLSPAHI--MVEKERVVEIAACHSAHTSAAKTQGGHV 336
Query: 291 YSFGS--GSNFCLGH 303
Y +G G + L H
Sbjct: 337 YMWGQCRGQSVTLPH 351
Score = 173 (66.0 bits), Expect = 3.8e-10, P = 3.8e-10
Identities = 63/226 (27%), Positives = 108/226 (47%)
Query: 122 HTLLISNSSV-FSCGSSLCGVLGHGPETTQCVSFTRI--NFPSAAHVVQVSASENHAAFV 178
H LL + V ++ G + LG+G T Q ++ ++ N VV+V+ +H+ +
Sbjct: 115 HVLLSTEDGVVYAWGHNGYSQLGNGT-TNQGIAPIQVCTNL-LIKQVVEVACGSHHSMAL 172
Query: 179 LQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
G+VF G N+ G T N+P R ++ L + G + + G V
Sbjct: 173 AADGEVFAWGYNNCGQVGSGSTANQPTPR-KVTNCLHIKRVVSIACGQTSSMAVLDNGEV 231
Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
+ G N +GQLG G+ ++ TP +A L V V QI G ++ LA+T G++Y++G+ +
Sbjct: 232 YGWGYNGNGQLGLGNNGNQLTPVRVAALHSV-CVNQIVCGYAHTLALTDEGLLYAWGANT 290
Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA-GDEHVVALDSSG 342
LG G +++ L P I + + VV ++A H A + G
Sbjct: 291 YGQLGTGNKNNLLSPAHIMVEKER---VVEIAACHSAHTSAAKTQG 333
Score = 159 (61.0 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 49/175 (28%), Positives = 82/175 (46%)
Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
S N A +V + +VF G N S C G D N+ P+ +EAL G K ++ G
Sbjct: 59 SANEALYVTDNDEVFVFGLNYSNCLGTGD-NQSTLVPKKLEALCGKKIKSLSYGSGPHVL 117
Query: 231 LTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
L+ G V+ G N + QLG+G T P + + VV++A G + +A+ +G
Sbjct: 118 LSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGE 177
Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
V+++G + +G G ++ PR + VV ++ G +A+ +G V
Sbjct: 178 VFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIK-RVVSIACGQTSSMAVLDNGEV 231
>UNIPROTKB|Q74AS9 [details] [associations]
symbol:GSU2272 "ATS1 domain repeat lipoprotein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 RefSeq:NP_953321.1
ProteinModelPortal:Q74AS9 GeneID:2686981 KEGG:gsu:GSU2272
PATRIC:22027399 HOGENOM:HOG000020996 OMA:TGTALAW
BioCyc:GSUL243231:GH27-2248-MONOMER Uniprot:Q74AS9
Length = 403
Score = 185 (70.2 bits), Expect = 8.1e-12, P = 8.1e-12
Identities = 52/205 (25%), Positives = 96/205 (46%)
Query: 115 QITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSAS 171
Q+ G H++ ++ +V++ GS+ G L P + F +A + + A
Sbjct: 143 QVAAGGLHSMALAGGTVWAWGSNSAGQLALNP-ISSATRFAPRQVETAKLPIAPTAIVAG 201
Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
+H+ S + + G+N+S G+ T P+ V+ + ++++AG + L
Sbjct: 202 GSHS-IAYTSTEAYAWGNNASGQLGN-GTTLSNHMPQKVQLPSSITIRKISAGGSHNLAL 259
Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
G + GSN +GQLG+G T ++ TP + V + + AGPS+ +AV N VY
Sbjct: 260 DSTGAIWAWGSNAYGQLGNGTTTNQSTPVQLTLPAGVTGFIDVFAGPSHSVAVASNFTVY 319
Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQ 316
++G + L G D+L P ++
Sbjct: 320 TWGFNTLGLLSVGTTGDQLSPAQVR 344
Score = 137 (53.3 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 63/238 (26%), Positives = 101/238 (42%)
Query: 116 ITTGRY-HTLLISNSSVFSC-GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
I++ Y H+ + N + + G++ G LG G TT + R+ A + + +
Sbjct: 35 ISSPAYSHSAVFQNMTTLAVWGNNESGQLGDGT-TTSAATPKRLRLGFATYSSGFATGAS 93
Query: 174 H----AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFT 228
H A F SG V G NS+ G P P + G +QV AG
Sbjct: 94 HTLAIARFDNVSG-VRAWGSNSAGQIGRDPATVPTSSTPVKIGGFGGA-VQQVAAG-GLH 150
Query: 229 GFLTIRGHVHTCGSNTHGQLGHG--DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
G V GSN+ GQL + R P+ + + + I AG S+ +A T
Sbjct: 151 SMALAGGTVWAWGSNSAGQLALNPISSATRFAPRQVETAKLPIAPTAIVAGGSHSIAYTS 210
Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
Y++G+ ++ LG+G P+ +Q I + ++SAG H +ALDS+G +
Sbjct: 211 TEA-YAWGNNASGQLGNGTTLSNHMPQKVQL--PSSITIRKISAGGSHNLALDSTGAI 265
Score = 123 (48.4 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 43/156 (27%), Positives = 67/156 (42%)
Query: 115 QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH-VVQVSASE 172
+I+ G H L + S ++++ GS+ G LG+G T Q ++ P+ + V A
Sbjct: 248 KISAGGSHNLALDSTGAIWAWGSNAYGQLGNGTTTNQSTP-VQLTLPAGVTGFIDVFAGP 306
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
+H+ V + V+T G N+ T + P V VP V + F T
Sbjct: 307 SHSVAVASNFTVYTWGFNTLGLLSVGTTGDQL-SPAQVRDASNVPFTDVERVVLLGSFFT 365
Query: 233 I-----RGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
I G + G N +GQLG G T +R P +A
Sbjct: 366 IVKKNGSGGMWAWGYNGYGQLGDGTTSNRTAPVQVA 401
Score = 116 (45.9 bits), Expect = 0.00053, P = 0.00053
Identities = 44/201 (21%), Positives = 86/201 (42%)
Query: 116 ITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHA 175
I G H++ +++ ++ G++ G LG+G + + ++ PS+ + ++SA +H
Sbjct: 198 IVAGGSHSIAYTSTEAYAWGNNASGQLGNGTTLSNHMP-QKVQLPSSITIRKISAGGSHN 256
Query: 176 AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 235
+ +G ++ G N+ G+ T +L V AG + + +
Sbjct: 257 LALDSTGAIWAWGSNAYGQLGNGTTTNQSTPVQLTLPAGVTGFIDVFAGPSHSVAVASNF 316
Query: 236 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG--SVVQIAAGPSYMLAV--TGNGVVY 291
V+T G NT G L G T D+ +P + V V ++ S+ V G+G ++
Sbjct: 317 TVYTWGFNTLGLLSVGTTGDQLSPAQVRDASNVPFTDVERVVLLGSFFTIVKKNGSGGMW 376
Query: 292 SFGSGSNFCLGHGEQHDELQP 312
++G LG G + P
Sbjct: 377 AWGYNGYGQLGDGTTSNRTAP 397
>TIGR_CMR|GSU_2272 [details] [associations]
symbol:GSU_2272 "lipoprotein, putative" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 RefSeq:NP_953321.1
ProteinModelPortal:Q74AS9 GeneID:2686981 KEGG:gsu:GSU2272
PATRIC:22027399 HOGENOM:HOG000020996 OMA:TGTALAW
BioCyc:GSUL243231:GH27-2248-MONOMER Uniprot:Q74AS9
Length = 403
Score = 185 (70.2 bits), Expect = 8.1e-12, P = 8.1e-12
Identities = 52/205 (25%), Positives = 96/205 (46%)
Query: 115 QITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSAS 171
Q+ G H++ ++ +V++ GS+ G L P + F +A + + A
Sbjct: 143 QVAAGGLHSMALAGGTVWAWGSNSAGQLALNP-ISSATRFAPRQVETAKLPIAPTAIVAG 201
Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
+H+ S + + G+N+S G+ T P+ V+ + ++++AG + L
Sbjct: 202 GSHS-IAYTSTEAYAWGNNASGQLGN-GTTLSNHMPQKVQLPSSITIRKISAGGSHNLAL 259
Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
G + GSN +GQLG+G T ++ TP + V + + AGPS+ +AV N VY
Sbjct: 260 DSTGAIWAWGSNAYGQLGNGTTTNQSTPVQLTLPAGVTGFIDVFAGPSHSVAVASNFTVY 319
Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQ 316
++G + L G D+L P ++
Sbjct: 320 TWGFNTLGLLSVGTTGDQLSPAQVR 344
Score = 137 (53.3 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 63/238 (26%), Positives = 101/238 (42%)
Query: 116 ITTGRY-HTLLISNSSVFSC-GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
I++ Y H+ + N + + G++ G LG G TT + R+ A + + +
Sbjct: 35 ISSPAYSHSAVFQNMTTLAVWGNNESGQLGDGT-TTSAATPKRLRLGFATYSSGFATGAS 93
Query: 174 H----AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFT 228
H A F SG V G NS+ G P P + G +QV AG
Sbjct: 94 HTLAIARFDNVSG-VRAWGSNSAGQIGRDPATVPTSSTPVKIGGFGGA-VQQVAAG-GLH 150
Query: 229 GFLTIRGHVHTCGSNTHGQLGHG--DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
G V GSN+ GQL + R P+ + + + I AG S+ +A T
Sbjct: 151 SMALAGGTVWAWGSNSAGQLALNPISSATRFAPRQVETAKLPIAPTAIVAGGSHSIAYTS 210
Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
Y++G+ ++ LG+G P+ +Q I + ++SAG H +ALDS+G +
Sbjct: 211 TEA-YAWGNNASGQLGNGTTLSNHMPQKVQL--PSSITIRKISAGGSHNLALDSTGAI 265
Score = 123 (48.4 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 43/156 (27%), Positives = 67/156 (42%)
Query: 115 QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH-VVQVSASE 172
+I+ G H L + S ++++ GS+ G LG+G T Q ++ P+ + V A
Sbjct: 248 KISAGGSHNLALDSTGAIWAWGSNAYGQLGNGTTTNQSTP-VQLTLPAGVTGFIDVFAGP 306
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
+H+ V + V+T G N+ T + P V VP V + F T
Sbjct: 307 SHSVAVASNFTVYTWGFNTLGLLSVGTTGDQL-SPAQVRDASNVPFTDVERVVLLGSFFT 365
Query: 233 I-----RGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
I G + G N +GQLG G T +R P +A
Sbjct: 366 IVKKNGSGGMWAWGYNGYGQLGDGTTSNRTAPVQVA 401
Score = 116 (45.9 bits), Expect = 0.00053, P = 0.00053
Identities = 44/201 (21%), Positives = 86/201 (42%)
Query: 116 ITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHA 175
I G H++ +++ ++ G++ G LG+G + + ++ PS+ + ++SA +H
Sbjct: 198 IVAGGSHSIAYTSTEAYAWGNNASGQLGNGTTLSNHMP-QKVQLPSSITIRKISAGGSHN 256
Query: 176 AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 235
+ +G ++ G N+ G+ T +L V AG + + +
Sbjct: 257 LALDSTGAIWAWGSNAYGQLGNGTTTNQSTPVQLTLPAGVTGFIDVFAGPSHSVAVASNF 316
Query: 236 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG--SVVQIAAGPSYMLAV--TGNGVVY 291
V+T G NT G L G T D+ +P + V V ++ S+ V G+G ++
Sbjct: 317 TVYTWGFNTLGLLSVGTTGDQLSPAQVRDASNVPFTDVERVVLLGSFFTIVKKNGSGGMW 376
Query: 292 SFGSGSNFCLGHGEQHDELQP 312
++G LG G + P
Sbjct: 377 AWGYNGYGQLGDGTTSNRTAP 397
>ZFIN|ZDB-GENE-020509-1 [details] [associations]
symbol:nek8 "NIMA (never in mitosis gene a)-related
kinase 8" species:7955 "Danio rerio" [GO:0004672 "protein kinase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0061326 "renal tubule development" evidence=IMP]
[GO:0072116 "pronephros formation" evidence=IGI] [GO:0072372
"primary cilium" evidence=IDA] [GO:0001947 "heart looping"
evidence=IGI] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-020509-1 GO:GO:0005524 GO:GO:0005737 GO:GO:0051301
GO:GO:0007067 GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112
GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0072372 GO:GO:0001947 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 KO:K08857 EMBL:AF407580
IPI:IPI00770181 RefSeq:NP_620776.1 UniGene:Dr.12587
ProteinModelPortal:Q90XC2 GeneID:171094 KEGG:dre:171094 CTD:284086
HOGENOM:HOG000006908 HOVERGEN:HBG098799 InParanoid:Q90XC2
NextBio:20797120 ArrayExpress:Q90XC2 GO:GO:0072116 GO:GO:0061326
Uniprot:Q90XC2
Length = 697
Score = 189 (71.6 bits), Expect = 8.3e-12, P = 8.3e-12
Identities = 57/168 (33%), Positives = 81/168 (48%)
Query: 155 TRINFPSA-AHVVQVSASENHAAFVLQSGQVFT-----CGDNSSFCCGHRDTNRPIFRPR 208
T + P V+QVS V +SG++ T G G + +P F R
Sbjct: 331 TPLRLPMLNTEVIQVSLGRTQKMGVTKSGRLITWEAPSVGSGEPTLPGAVEQMQPQFISR 390
Query: 209 LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 268
+E GV K V+ G FT LT RG + T GS ++G LGHG+ D PK + L +
Sbjct: 391 FLEGQSGVTIKSVSCGDLFTTCLTDRGIIMTFGSGSNGCLGHGNFNDVTQPKIVEAL--L 448
Query: 269 G-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAI 315
G +VQ++ G S++LAVT V+S+G G N LG Q P+ +
Sbjct: 449 GYELVQVSCGASHVLAVTNEREVFSWGRGDNGRLGLATQDSHNCPQQV 496
Score = 142 (55.0 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 56/228 (24%), Positives = 95/228 (41%)
Query: 106 IVETSAGN--MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQ-CVSFTRINFPS 161
IVE G +Q++ G H L ++N VFS G G LG + + C +++ P+
Sbjct: 443 IVEALLGYELVQVSCGASHVLAVTNEREVFSWGRGDNGRLGLATQDSHNCPQ--QVSLPA 500
Query: 162 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRP-----IFRPRLVEAL 213
+V + + + Q+ CG+N G T P + L + +
Sbjct: 501 DFEAQRVLCGVDCSMIMSTQHQILACGNNRFNKLGLDKVSGTEEPSSFCQVEEVHLFQLV 560
Query: 214 KGVPCKQ-----VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 268
+ P + G + +T +G T GSN HGQLG P ++ L+
Sbjct: 561 QSAPLNTEKIVYIDIGTAHSVAVTEKGQCFTFGSNQHGQLGCSHRRSSRVPYQVSGLQ-- 618
Query: 269 GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
+ A G ++ LA+ G VY++G G+ LG E+ + P+ +Q
Sbjct: 619 -GITMAACGDAFTLAIGAEGEVYTWGKGARGRLGRKEEDFGI-PKPVQ 664
Score = 137 (53.3 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 63/270 (23%), Positives = 110/270 (40%)
Query: 93 VLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGP--ETTQ 150
+ RFL+ + I S G++ + T L + + GS G LGHG + TQ
Sbjct: 388 ISRFLEG-QSGVTIKSVSCGDL------FTTCLTDRGIIMTFGSGSNGCLGHGNFNDVTQ 440
Query: 151 CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG--DNSSFCCGHRDTNRPIFRPR 208
+ +VQVS +H V +VF+ G DN +D++ P+
Sbjct: 441 PKIVEAL---LGYELVQVSCGASHVLAVTNEREVFSWGRGDNGRLGLATQDSHNC---PQ 494
Query: 209 LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 268
V ++V G++ + ++ + + CG+N +LG P S +EEV
Sbjct: 495 QVSLPADFEAQRVLCGVDCSMIMSTQHQILACGNNRFNKLGLDKVSGTEEPSSFCQVEEV 554
Query: 269 G-------------SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAI 315
+V I G ++ +AVT G ++FGS + LG + P
Sbjct: 555 HLFQLVQSAPLNTEKIVYIDIGTAHSVAVTEKGQCFTFGSNQHGQLGCSHRRSSRVP--- 611
Query: 316 QTFRRKGIHVVRVSA-GDEHVVALDSSGYV 344
++ G+ + ++A GD +A+ + G V
Sbjct: 612 --YQVSGLQGITMAACGDAFTLAIGAEGEV 639
>UNIPROTKB|F1PV11 [details] [associations]
symbol:RCBTB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097
SMART:SM00225 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104208 CTD:55213 KO:K11494 OMA:NCSNCLG
EMBL:AAEX03013105 RefSeq:XP_542558.2 Ensembl:ENSCAFT00000006979
GeneID:485440 KEGG:cfa:485440 Uniprot:F1PV11
Length = 531
Score = 187 (70.9 bits), Expect = 8.8e-12, P = 8.8e-12
Identities = 59/216 (27%), Positives = 90/216 (41%)
Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
N VF G + LG G + V ++ + +S S H + G V+
Sbjct: 40 NDEVFVFGLNYSNCLGTGDNQSTLVP-KKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYA 98
Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
G N G+ TN+ I ++ L +V G + + L G V G N G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158
Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
Q+G G T ++PTP+ + + VV IA G + +AV NG VY +G N LG G
Sbjct: 159 QVGSGSTTNQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNN 218
Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
++L P + + V ++ G H +AL G
Sbjct: 219 GNQLTPVRVAALH--SVCVNQIVCGYAHTLALTDEG 252
Score = 177 (67.4 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 59/195 (30%), Positives = 92/195 (47%)
Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
+++ G +H++ L ++ VF+ G + CG +G G T Q N VV ++ +
Sbjct: 131 VEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIKRVVGIACGQ 190
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
+ VL +G+V+ G N + G + + P V AL V Q+ G T LT
Sbjct: 191 TSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL-TPVRVAALHSVCVNQIVCGYAHTLALT 249
Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY--MLAVTGNGVV 290
G ++ G+NT+GQLG G+ + +P I + E VV+IAA S A T G V
Sbjct: 250 DEGLLYAWGANTYGQLGTGNKNNLLSPAHI--MVEKERVVEIAACHSAHTSAAKTQGGHV 307
Query: 291 YSFGS--GSNFCLGH 303
Y +G G + L H
Sbjct: 308 YMWGQCRGQSVVLPH 322
Score = 171 (65.3 bits), Expect = 5.8e-10, P = 5.8e-10
Identities = 63/226 (27%), Positives = 108/226 (47%)
Query: 122 HTLLISNSSV-FSCGSSLCGVLGHGPETTQCVSFTRI--NFPSAAHVVQVSASENHAAFV 178
H LL + V ++ G + LG+G T Q ++ ++ N VV+V+ +H+ +
Sbjct: 86 HVLLSTEDGVVYAWGHNGYSQLGNGT-TNQGIAPIQVCTNL-LIKQVVEVACGSHHSMAL 143
Query: 179 LQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
G+VF G N+ G T N+P R ++ L + G + + G V
Sbjct: 144 AADGEVFAWGYNNCGQVGSGSTTNQPTPR-KVTNCLHIKRVVGIACGQTSSMAVLDNGEV 202
Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
+ G N +GQLG G+ ++ TP +A L V V QI G ++ LA+T G++Y++G+ +
Sbjct: 203 YGWGYNGNGQLGLGNNGNQLTPVRVAALHSV-CVNQIVCGYAHTLALTDEGLLYAWGANT 261
Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA-GDEHVVALDSSG 342
LG G +++ L P I + + VV ++A H A + G
Sbjct: 262 YGQLGTGNKNNLLSPAHIMVEKER---VVEIAACHSAHTSAAKTQG 304
Score = 158 (60.7 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 49/175 (28%), Positives = 82/175 (46%)
Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
S N A +V + +VF G N S C G D N+ P+ +EAL G K ++ G
Sbjct: 30 SANEALYVTDNDEVFVFGLNYSNCLGTGD-NQSTLVPKKLEALCGKKIKSLSYGSGPHVL 88
Query: 231 LTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
L+ G V+ G N + QLG+G T P + + VV++A G + +A+ +G
Sbjct: 89 LSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGE 148
Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
V+++G + +G G ++ PR + VV ++ G +A+ +G V
Sbjct: 149 VFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIK-RVVGIACGQTSSMAVLDNGEV 202
>UNIPROTKB|Q8NDN9 [details] [associations]
symbol:RCBTB1 "RCC1 and BTB domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR000210 InterPro:IPR013069
Pfam:PF00651 PROSITE:PS50097 SMART:SM00225 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GO:GO:0006351 GO:GO:0016568 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 GO:GO:0007049 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 EMBL:AL139321 EMBL:AF334406
EMBL:AJ319660 EMBL:AK096654 EMBL:AL833821 EMBL:BC038104
IPI:IPI00329626 IPI:IPI00973193 RefSeq:NP_060661.3
UniGene:Hs.508021 ProteinModelPortal:Q8NDN9 SMR:Q8NDN9
IntAct:Q8NDN9 MINT:MINT-4718485 STRING:Q8NDN9 PhosphoSite:Q8NDN9
DMDM:74751227 PRIDE:Q8NDN9 DNASU:55213 Ensembl:ENST00000258646
Ensembl:ENST00000378302 Ensembl:ENST00000546015 GeneID:55213
KEGG:hsa:55213 UCSC:uc001vde.1 CTD:55213 GeneCards:GC13M050106
HGNC:HGNC:18243 HPA:HPA045925 MIM:607867 neXtProt:NX_Q8NDN9
PharmGKB:PA134955699 HOGENOM:HOG000065752 HOVERGEN:HBG053261
InParanoid:Q8NDN9 KO:K11494 OMA:NCSNCLG OrthoDB:EOG4MSCXX
PhylomeDB:Q8NDN9 GenomeRNAi:55213 NextBio:59164 ArrayExpress:Q8NDN9
Bgee:Q8NDN9 CleanEx:HS_RCBTB1 Genevestigator:Q8NDN9
GermOnline:ENSG00000136144 Uniprot:Q8NDN9
Length = 531
Score = 187 (70.9 bits), Expect = 8.8e-12, P = 8.8e-12
Identities = 59/216 (27%), Positives = 90/216 (41%)
Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
N VF G + LG G + V ++ + +S S H + G V+
Sbjct: 40 NDEVFVFGLNYSNCLGTGDNQSTLVP-KKLEGLCGKKIKSLSYGSGPHVLLSTEDGVVYA 98
Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
G N G+ TN+ I ++ L +V G + + L G V G N G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158
Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
Q+G G T ++PTP+ + + VV IA G + +AV NG VY +G N LG G
Sbjct: 159 QVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNN 218
Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
++L P + + V ++ G H +AL G
Sbjct: 219 GNQLTPVRVAALH--SVCVNQIVCGYAHTLALTDEG 252
Score = 173 (66.0 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 63/230 (27%), Positives = 110/230 (47%)
Query: 122 HTLLISNSSV-FSCGSSLCGVLGHGPETTQCVSFTRI--NFPSAAHVVQVSASENHAAFV 178
H LL + V ++ G + LG+G T Q ++ ++ N VV+V+ +H+ +
Sbjct: 86 HVLLSTEDGVVYAWGHNGYSQLGNGT-TNQGIAPVQVCTNL-LIKQVVEVACGSHHSMAL 143
Query: 179 LQSGQVFT-----CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
G+VF CG S ++ T R + ++ + G+ C Q ++ L
Sbjct: 144 AADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSS----MAVLD- 198
Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
G V+ G N +GQLG G+ ++ TP +A L V V QI G ++ LA+T G++Y++
Sbjct: 199 NGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSV-CVNQIVCGYAHTLALTDEGLLYAW 257
Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA-GDEHVVALDSSG 342
G+ + LG G +++ L P I + + VV ++A H A + G
Sbjct: 258 GANTYGQLGTGNKNNLLSPAHIMVEKER---VVEIAACHSAHTSAAKTQG 304
Score = 172 (65.6 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 58/195 (29%), Positives = 91/195 (46%)
Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
+++ G +H++ L ++ VF+ G + CG +G G Q N VV ++ +
Sbjct: 131 VEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQ 190
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
+ VL +G+V+ G N + G + + P V AL V Q+ G T LT
Sbjct: 191 TSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL-TPVRVAALHSVCVNQIVCGYAHTLALT 249
Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY--MLAVTGNGVV 290
G ++ G+NT+GQLG G+ + +P I + E VV+IAA S A T G V
Sbjct: 250 DEGLLYAWGANTYGQLGTGNKNNLLSPAHI--MVEKERVVEIAACHSAHTSAAKTQGGHV 307
Query: 291 YSFGS--GSNFCLGH 303
Y +G G + L H
Sbjct: 308 YMWGQCRGQSVILPH 322
Score = 154 (59.3 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 52/183 (28%), Positives = 85/183 (46%)
Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
A V SASE A +V + +VF G N S C G D N+ P+ +E L G K ++
Sbjct: 24 ACVFGTSASE--ALYVTDNDEVFVFGLNYSNCLGTGD-NQSTLVPKKLEGLCGKKIKSLS 80
Query: 223 AGLNFTGFLTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
G L+ G V+ G N + QLG+G T P + + VV++A G +
Sbjct: 81 YGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHS 140
Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
+A+ +G V+++G + +G G ++ PR + VV ++ G +A+ +
Sbjct: 141 MALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIK-RVVGIACGQTSSMAVLDN 199
Query: 342 GYV 344
G V
Sbjct: 200 GEV 202
>ZFIN|ZDB-GENE-070912-423 [details] [associations]
symbol:rpgra "retinitis pigmentosa GTPase regulator
a" species:7955 "Danio rerio" [GO:0072001 "renal system
development" evidence=IMP] INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-070912-423 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0072001 GeneTree:ENSGT00700000104160 EMBL:BX571713
IPI:IPI00955233 RefSeq:XP_003199276.1 Ensembl:ENSDART00000079095
GeneID:571327 KEGG:dre:571327 CTD:571327 NextBio:20890513
Bgee:F1QV77 Uniprot:F1QV77
Length = 1698
Score = 193 (73.0 bits), Expect = 9.7e-12, P = 9.7e-12
Identities = 53/179 (29%), Positives = 86/179 (48%)
Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
V +S ++H+AFV + G++F GDN+ G + P+ +P V+ LKG + V G
Sbjct: 37 VHISCGQSHSAFVTEQGRLFVFGDNNRGQLGLQ-IKGPVTKPVCVKVLKGERAQSVACGT 95
Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
+ T T +G + G N+ GQLG G D + + + P + + ++AG A+T
Sbjct: 96 DHTLVSTSQGEILAAGGNSDGQLGLGHCNDSISFQRLRPFCDYAPIKLLSAGDHTSAALT 155
Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
+G ++ +G S LG G L P+ + + IH V S G H + SG V
Sbjct: 156 EDGRLFLWGDNSAGQLGFGNDSHALLPKELNM--GQSIHWV--SCGYRHSALVTDSGDV 210
Score = 185 (70.2 bits), Expect = 7.7e-11, P = 7.7e-11
Identities = 66/232 (28%), Positives = 109/232 (46%)
Query: 116 ITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRIN-FPSAAHVVQVSASEN 173
+ G HTL+ S + + G + G LG G +SF R+ F A + +SA ++
Sbjct: 91 VACGTDHTLVSTSQGEILAAGGNSDGQLGLG-HCNDSISFQRLRPFCDYAPIKLLSAGDH 149
Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
+A + + G++F GDNS+ G + + + P+ E G V+ G + +T
Sbjct: 150 TSAALTEDGRLFLWGDNSAGQLGFGNDSHALL-PK--ELNMGQSIHWVSCGYRHSALVTD 206
Query: 234 RGHVHTCGSNTHGQLGHG--DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
G V++ G + G+LG + P+ + E + SV+Q+A G + LA+T + + Y
Sbjct: 207 SGDVYSFGESADGRLGLSAHQLANHSYPQRV---ESLHSVLQVACGGKHTLALTEDEL-Y 262
Query: 292 SFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
FG G LG G P A+ FR KG V V+ G++H + SG
Sbjct: 263 CFGGGEFGQLGLGTLVFVADSPVAVGHFR-KG-RVTHVTCGEQHSALITDSG 312
Score = 178 (67.7 bits), Expect = 4.7e-10, P = 4.7e-10
Identities = 61/223 (27%), Positives = 102/223 (45%)
Query: 122 HT--LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
HT L + +F G + G LG G ++ + +N + H VS H+A V
Sbjct: 149 HTSAALTEDGRLFLWGDNSAGQLGFGNDSHALLP-KELNMGQSIH--WVSCGYRHSALVT 205
Query: 180 QSGQVFTCGDNSSFCCG---HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
SG V++ G+++ G H+ N P+ VE+L V QV G T LT
Sbjct: 206 DSGDVYSFGESADGRLGLSAHQLANHSY--PQRVESLHSV--LQVACGGKHTLALT-EDE 260
Query: 237 VHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
++ G GQLG G + +P ++ + G V + G + +T +G++Y+FG
Sbjct: 261 LYCFGGGEFGQLGLGTLVFVADSPVAVGHFRK-GRVTHVTCGEQHSALITDSGLLYTFGD 319
Query: 296 GSNFCLGHGEQH--DELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
G + LGHG+++ ++ P Q F V+ V+ G H++
Sbjct: 320 GRHGKLGHGDENFTNQFTPTVCQRFFEYS--VMTVACGSSHML 360
>FB|FBgn0045980 [details] [associations]
symbol:niki "nimA-like kinase" species:7227 "Drosophila
melanogaster" [GO:0004702 "receptor signaling protein
serine/threonine kinase activity" evidence=ISS;NAS] [GO:0006468
"protein phosphorylation" evidence=IEA;NAS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0048812 "neuron projection
morphogenesis" evidence=IMP] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE014297
GO:GO:0005524 eggNOG:COG0515 SUPFAM:SSF56112 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004702 HSSP:O14965
PRINTS:PR00633 PROSITE:PS50012 KO:K08857
GeneTree:ENSGT00700000104137 RefSeq:NP_651293.1 UniGene:Dm.27397
ProteinModelPortal:Q9VC32 SMR:Q9VC32 PRIDE:Q9VC32
EnsemblMetazoa:FBtr0084737 GeneID:42959 KEGG:dme:Dmel_CG10951
UCSC:CG10951-RA CTD:42959 FlyBase:FBgn0045980 InParanoid:Q9VC32
OMA:WRHYPTK OrthoDB:EOG4FJ6QP PhylomeDB:Q9VC32 GenomeRNAi:42959
NextBio:831528 ArrayExpress:Q9VC32 Bgee:Q9VC32 Uniprot:Q9VC32
Length = 841
Score = 189 (71.6 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 56/198 (28%), Positives = 92/198 (46%)
Query: 151 CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV 210
C S I P A +V V+ S++H V + G + G+ + G P +
Sbjct: 440 CFSMAPIQLPPKAVIVDVAMSDSHFVVVNEDGSAYAWGEGTHGQLGLTALEAWKHYPSRM 499
Query: 211 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 270
E+++ AG FT +T G + +CGSN H LG + + +PK IA L +V
Sbjct: 500 ESVRNYHVVSACAGDGFTILVTQAGSLLSCGSNAHLALGQDEQRNYHSPKLIARLADV-R 558
Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVS 329
V Q+AAG ++LA++ G VY +G+ + LG G Q + P+ I K ++
Sbjct: 559 VEQVAAGLQHVLALSREGAVYVWGTSTCGALGLGNYQQQQKFPQKILLSHVK-TKPSKIY 617
Query: 330 AGDEHVVALDSSGYVSLC 347
G + L ++G + +C
Sbjct: 618 CGPDTSAVLFANGELHVC 635
>UNIPROTKB|F1RQL8 [details] [associations]
symbol:IBTK "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051209 "release of sequestered calcium ion into
cytosol" evidence=IEA] [GO:0030292 "protein tyrosine kinase
inhibitor activity" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 GO:GO:0051209
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 GO:GO:0030292
OMA:VSALHHK GeneTree:ENSGT00700000104160 EMBL:CU392845
Ensembl:ENSSSCT00000004926 Uniprot:F1RQL8
Length = 1346
Score = 190 (71.9 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 68/227 (29%), Positives = 103/227 (45%)
Query: 129 SSVFSCGSSLCGVLGHGPETTQC-VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
+ V++ G + LGHG + ++ + S ++ QV + H+ F+ Q GQV+TC
Sbjct: 142 TDVYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGVYIKQVVLCKFHSVFLSQKGQVYTC 201
Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
G GH D + PRLVE L G C QV A + T LT G V+T G N Q
Sbjct: 202 GHGPGGRLGHGDEQTCLV-PRLVEGLSGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQ 260
Query: 248 LGH-GDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFG-SGSNFCLGH- 303
LG + P+ + G +++ +AAG + + T V Y+ G +G LGH
Sbjct: 261 LGIIPPPSNCNVPRQMQAKYLKGRTIIGVAAGRFHTVLWTREAV-YTLGLNGGQ--LGHL 317
Query: 304 ----GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSL 346
GE+ PR + K I + V+A D V + + G + L
Sbjct: 318 LDPSGEKC-VTAPRQVSALHHKDIALSLVAASDGATVCVTARGDIYL 363
Score = 148 (57.2 bits), Expect = 7.7e-07, P = 7.7e-07
Identities = 59/208 (28%), Positives = 94/208 (45%)
Query: 98 QSVEHSSDIVETSAGN----MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCV 152
Q+ +H ++V+ + + Q+ ++H++ +S V++CG G LGHG E T C+
Sbjct: 160 QNSKHHPELVDLFSRSGVYIKQVVLCKFHSVFLSQKGQVYTCGHGPGGRLGHGDEQT-CL 218
Query: 153 SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA 212
+ S + QV+A+++H + + G V+T G N G PR ++A
Sbjct: 219 VPRLVEGLSGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQLGIIPPPSNCNVPRQMQA 278
Query: 213 --LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 270
LKG V AG F L R V+T G N GQLGH LD K + +V +
Sbjct: 279 KYLKGRTIIGVAAG-RFHTVLWTREAVYTLGLNG-GQLGH--LLDPSGEKCVTAPRQVSA 334
Query: 271 VVQ-------IAAGPSYMLAVTGNGVVY 291
+ +AA + VT G +Y
Sbjct: 335 LHHKDIALSLVAASDGATVCVTARGDIY 362
>MGI|MGI:1918580 [details] [associations]
symbol:Rcbtb1 "regulator of chromosome condensation (RCC1)
and BTB (POZ) domain containing protein 1" species:10090 "Mus
musculus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] InterPro:IPR000210 InterPro:IPR013069
Pfam:PF00651 PROSITE:PS50097 SMART:SM00225 MGI:MGI:1918580
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
GO:GO:0006355 GO:GO:0006351 GO:GO:0016568 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0007049 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GeneTree:ENSGT00700000104208 CTD:55213 HOGENOM:HOG000065752
HOVERGEN:HBG053261 KO:K11494 OrthoDB:EOG4MSCXX EMBL:AK033501
EMBL:AK088299 EMBL:BC067005 IPI:IPI00469440 RefSeq:NP_082040.2
UniGene:Mm.234195 ProteinModelPortal:Q6NXM2 SMR:Q6NXM2
IntAct:Q6NXM2 STRING:Q6NXM2 PhosphoSite:Q6NXM2 PaxDb:Q6NXM2
PRIDE:Q6NXM2 Ensembl:ENSMUST00000022551 Ensembl:ENSMUST00000043227
GeneID:71330 KEGG:mmu:71330 UCSC:uc007ueb.2 InParanoid:Q6NXM2
NextBio:333557 Bgee:Q6NXM2 Genevestigator:Q6NXM2
GermOnline:ENSMUSG00000035469 Uniprot:Q6NXM2
Length = 531
Score = 184 (69.8 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 58/216 (26%), Positives = 90/216 (41%)
Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
N VF G + LG G + V ++ + +S S H + G V+
Sbjct: 40 NDEVFVFGLNYSNCLGTGDNQSTLVP-KKLEALCGKKIKSLSYGSGPHVLLTTEDGVVYA 98
Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
G N G+ TN+ I ++ L +V G + + L G + G N G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCG 158
Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
Q+G G T ++PTP+ + VV IA G + +AV +G VY +G N LG G
Sbjct: 159 QVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNN 218
Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
++L P + G+ V ++ G H +AL G
Sbjct: 219 GNQLTPVRVAALH--GMCVNQIVCGYAHTLALTDEG 252
Score = 177 (67.4 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 57/195 (29%), Positives = 91/195 (46%)
Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
+++ G +H++ L ++ +F+ G + CG +G G Q N VV ++ +
Sbjct: 131 IEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQ 190
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
+ VL SG+V+ G N + G + + P V AL G+ Q+ G T LT
Sbjct: 191 TSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQL-TPVRVAALHGMCVNQIVCGYAHTLALT 249
Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY--MLAVTGNGVV 290
G ++ G+NT+GQLG G + +P I + E V++IAA S A T G V
Sbjct: 250 DEGLLYAWGANTYGQLGTGSKNNLLSPTQI--MVEKERVIEIAACHSTHTSAAKTQGGHV 307
Query: 291 YSFGS--GSNFCLGH 303
Y +G G + L H
Sbjct: 308 YMWGQCRGQSVILPH 322
Score = 168 (64.2 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 58/225 (25%), Positives = 106/225 (47%)
Query: 122 HTLLISNSSV-FSCGSSLCGVLGHGPETTQCVSFTRI--NFPSAAHVVQVSASENHAAFV 178
H LL + V ++ G + LG+G T Q ++ ++ N V++V+ +H+ +
Sbjct: 86 HVLLTTEDGVVYAWGHNGYSQLGNGT-TNQGIAPVQVCTNL-LIKQVIEVACGSHHSMAL 143
Query: 179 LQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
G++F G N+ G T N+P R ++ L + G + + G V
Sbjct: 144 AADGELFAWGYNNCGQVGSGSTANQPTPR-KVTNCLHTKRVVNIACGQTSSMAVLDSGEV 202
Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
+ G N +GQLG G+ ++ TP +A L + V QI G ++ LA+T G++Y++G+ +
Sbjct: 203 YGWGYNGNGQLGLGNNGNQLTPVRVAALHGM-CVNQIVCGYAHTLALTDEGLLYAWGANT 261
Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
LG G +++ L P I + + I + + H A + G
Sbjct: 262 YGQLGTGSKNNLLSPTQIMVEKERVIEIA--ACHSTHTSAAKTQG 304
Score = 166 (63.5 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 49/175 (28%), Positives = 82/175 (46%)
Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
S N A +V + +VF G N S C G D N+ P+ +EAL G K ++ G
Sbjct: 30 SANEAIYVTDNDEVFVFGLNYSNCLGTGD-NQSTLVPKKLEALCGKKIKSLSYGSGPHVL 88
Query: 231 LTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
LT G V+ G N + QLG+G T P + + V+++A G + +A+ +G
Sbjct: 89 LTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGE 148
Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
++++G + +G G ++ PR + VV ++ G +A+ SG V
Sbjct: 149 LFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTK-RVVNIACGQTSSMAVLDSGEV 202
>UNIPROTKB|B4DFC0 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
PANTHER:PTHR22870:SF7 UniGene:Hs.32470 HGNC:HGNC:17499
EMBL:AC055860 EMBL:AC124058 EMBL:AC124078 EMBL:AK294022
IPI:IPI00977685 SMR:B4DFC0 STRING:B4DFC0 Ensembl:ENST00000532265
UCSC:uc010rcz.1 Uniprot:B4DFC0
Length = 174
Score = 161 (61.7 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 58/173 (33%), Positives = 78/173 (45%)
Query: 124 LLISNSSVFSCGSSLCGVLG--HGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQS 181
+L N V SCGS+ G LG HGP +CV I VV ++A HA S
Sbjct: 1 MLTENGQVLSCGSNSFGQLGVPHGPR--RCVVPQAIELHKEK-VVCIAAGLRHAVAATAS 57
Query: 182 GQVFTCGDNSSFCCGHR---DTNRPIF----RPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
G VF G + CG R P+F P V L+ V AG + + LT
Sbjct: 58 GIVFQWGTGLA-SCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDA 116
Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVTG 286
G V+ GSN HGQL + + P P+ I A + V I +G ++++A TG
Sbjct: 117 GEVYVWGSNKHGQLAN-EAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTG 168
Score = 115 (45.5 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 42/122 (34%), Positives = 61/122 (50%)
Query: 231 LTIRGHVHTCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
LT G V +CGSN+ GQLG HG P++I +E VV IAAG + +A T +G
Sbjct: 2 LTENGQVLSCGSNSFGQLGVPHGPRRC-VVPQAIELHKE--KVVCIAAGLRHAVAATASG 58
Query: 289 VVYSFGSGSNFCLGHGEQHDELQP---RAIQTFRRKGIH---VVRVSAGDEHVVALDSSG 342
+V+ +G+G C G + P A + R G+ + V AG +H +L +G
Sbjct: 59 IVFQWGTGLASC-GRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAG 117
Query: 343 YV 344
V
Sbjct: 118 EV 119
>UNIPROTKB|E1BKF7 [details] [associations]
symbol:RCBTB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104208 CTD:55213 KO:K11494
OMA:NCSNCLG EMBL:DAAA02032915 EMBL:DAAA02032914 IPI:IPI00826911
RefSeq:NP_001178141.1 UniGene:Bt.22187 Ensembl:ENSBTAT00000035796
GeneID:785222 KEGG:bta:785222 NextBio:20927167 Uniprot:E1BKF7
Length = 531
Score = 183 (69.5 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 60/227 (26%), Positives = 95/227 (41%)
Query: 118 TGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHA 175
T L +++S VF G + LG G + V ++ + +S S H
Sbjct: 29 TSANEALYVTDSDEVFVFGLNYSSCLGTGDNHSTLVP-KKLEALCGKKIKSLSYGSGPHV 87
Query: 176 AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 235
+ G V+ G N G+ TN+ + ++ L +V G + + L G
Sbjct: 88 LLSTEDGVVYAWGHNGYSQLGNGTTNQGLAPIQVCTNLLIKQVVEVACGSHHSMALAADG 147
Query: 236 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
V G N GQ+G G T ++PTP+ + + VV IA G + +AV NG VY +G
Sbjct: 148 EVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGY 207
Query: 296 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
N LG G ++L P + + V ++ G H +AL G
Sbjct: 208 NGNGQLGLGNNGNQLTPVRVAALH--SVCVNQIVCGYAHTLALTDEG 252
Score = 171 (65.3 bits), Expect = 5.8e-10, P = 5.8e-10
Identities = 57/195 (29%), Positives = 91/195 (46%)
Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
+++ G +H++ L ++ VF+ G + CG +G G Q N VV ++ +
Sbjct: 131 VEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQ 190
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
+ VL +G+V+ G N + G + + P V AL V Q+ G T LT
Sbjct: 191 TSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL-TPVRVAALHSVCVNQIVCGYAHTLALT 249
Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY--MLAVTGNGVV 290
G ++ G+NT+GQLG G+ + +P I + E V++IAA S A T G V
Sbjct: 250 DEGLLYAWGANTYGQLGTGNKNNLLSPAHI--MVEKERVIEIAACHSAHTSAAKTQGGHV 307
Query: 291 YSFGS--GSNFCLGH 303
Y +G G + L H
Sbjct: 308 YMWGQCRGQSVTLPH 322
Score = 170 (64.9 bits), Expect = 7.5e-10, P = 7.5e-10
Identities = 61/229 (26%), Positives = 108/229 (47%)
Query: 122 HTLLISNSSV-FSCGSSLCGVLGHGPETTQCVSFTRI--NFPSAAHVVQVSASENHAAFV 178
H LL + V ++ G + LG+G T Q ++ ++ N VV+V+ +H+ +
Sbjct: 86 HVLLSTEDGVVYAWGHNGYSQLGNGT-TNQGLAPIQVCTNL-LIKQVVEVACGSHHSMAL 143
Query: 179 LQSGQVFT-----CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
G+VF CG S ++ T R + ++ + G+ C Q ++ L
Sbjct: 144 AADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSS----MAVLD- 198
Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
G V+ G N +GQLG G+ ++ TP +A L V V QI G ++ LA+T G++Y++
Sbjct: 199 NGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSV-CVNQIVCGYAHTLALTDEGLLYAW 257
Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
G+ + LG G +++ L P I + + I + + H A + G
Sbjct: 258 GANTYGQLGTGNKNNLLSPAHIMVEKERVIEIAACHSA--HTSAAKTQG 304
>UNIPROTKB|F1MMV0 [details] [associations]
symbol:IBTK "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051209 "release of sequestered calcium ion into
cytosol" evidence=IEA] [GO:0030292 "protein tyrosine kinase
inhibitor activity" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 GO:GO:0051209
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS50012 GO:GO:0030292 OMA:VSALHHK
GeneTree:ENSGT00700000104160 EMBL:DAAA02025482 EMBL:DAAA02025483
IPI:IPI00708608 Ensembl:ENSBTAT00000038116 Uniprot:F1MMV0
Length = 1353
Score = 188 (71.2 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 65/227 (28%), Positives = 102/227 (44%)
Query: 129 SSVFSCGSSLCGVLGHGPETTQC-VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
+ V++ G + LGHG + ++ + S ++ QV + H+ F+ Q GQV+TC
Sbjct: 142 TDVYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTC 201
Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
G GH D + PRLVE L G C QV A + T LT G V+T G N Q
Sbjct: 202 GHGPGGRLGHGDEQTCLV-PRLVEGLSGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQ 260
Query: 248 LGHGDTLDRPT----PKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFG-SGSN--F 299
LG + P+ P+ + G +++ +AAG + + T V Y+ G +G +
Sbjct: 261 LG---LIPPPSSCNVPRQMQAKYLKGRTIIGVAAGRFHTVLWTREAV-YTMGLNGGQLGY 316
Query: 300 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSL 346
L + PR + K I + V+A D V + + G + L
Sbjct: 317 LLDPNGEKCVTAPRQVSALHHKDITLSLVAASDGATVCVTTKGDIYL 363
Score = 141 (54.7 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 58/208 (27%), Positives = 94/208 (45%)
Query: 98 QSVEHSSDIVETSAGN----MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCV 152
Q+ +H ++V+ + + Q+ ++H++ +S V++CG G LGHG E T C+
Sbjct: 160 QNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGHGPGGRLGHGDEQT-CL 218
Query: 153 SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA 212
+ S + QV+A+++H + + G V+T G N G PR ++A
Sbjct: 219 VPRLVEGLSGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQLGLIPPPSSCNVPRQMQA 278
Query: 213 --LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR------PTPKSIAP 264
LKG V AG F L R V+T G N GQLG+ LD P+ ++
Sbjct: 279 KYLKGRTIIGVAAG-RFHTVLWTREAVYTMGLNG-GQLGY--LLDPNGEKCVTAPRQVSA 334
Query: 265 LEEVGSVVQ-IAAGPSYMLAVTGNGVVY 291
L + +AA + VT G +Y
Sbjct: 335 LHHKDITLSLVAASDGATVCVTTKGDIY 362
>UNIPROTKB|Q9P258 [details] [associations]
symbol:RCC2 "Protein RCC2" species:9606 "Homo sapiens"
[GO:0005874 "microtubule" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0000775 "chromosome, centromeric region"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005819
"spindle" evidence=IEA] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005829 Reactome:REACT_115566 Reactome:REACT_21300
GO:GO:0000775 GO:GO:0005730 GO:GO:0051301 GO:GO:0005819
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005874
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GO:GO:0000236 CTD:55920 HOGENOM:HOG000232061
HOVERGEN:HBG080538 OMA:FGENKLG OrthoDB:EOG4DNF4B EMBL:AJ421269
EMBL:AB040903 EMBL:BC004933 EMBL:BC042141 EMBL:BC053908
EMBL:AL359612 IPI:IPI00465044 PIR:T50630 RefSeq:NP_001129676.1
RefSeq:NP_061185.1 UniGene:Hs.380857 ProteinModelPortal:Q9P258
SMR:Q9P258 IntAct:Q9P258 STRING:Q9P258 PhosphoSite:Q9P258
DMDM:71152033 SWISS-2DPAGE:Q9P258 PaxDb:Q9P258 PeptideAtlas:Q9P258
PRIDE:Q9P258 Ensembl:ENST00000375433 Ensembl:ENST00000375436
GeneID:55920 KEGG:hsa:55920 UCSC:uc001bal.3 GeneCards:GC01M017733
HGNC:HGNC:30297 MIM:609587 neXtProt:NX_Q9P258 PharmGKB:PA142671091
InParanoid:Q9P258 GenomeRNAi:55920 NextBio:61323 Bgee:Q9P258
CleanEx:HS_RCC2 Genevestigator:Q9P258 GermOnline:ENSG00000179051
Uniprot:Q9P258
Length = 522
Score = 158 (60.7 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 49/160 (30%), Positives = 71/160 (44%)
Query: 145 GPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPI 204
GP C++ R+ VV S + H+ + G++++ G N GH DT R +
Sbjct: 138 GPHRYGCLAGVRVRT-----VVSGSCAA-HSLLITTEGKLWSWGRNEKGQLGHGDTKR-V 190
Query: 205 FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIA 263
PRL+E L G N T LT G V G N GQLG G+ D P+P I
Sbjct: 191 EAPRLIEGLSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTDAVPSPAQI- 249
Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 303
+ + ++A G + + + G +YSFG LGH
Sbjct: 250 -MYNGQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGH 288
Score = 151 (58.2 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 46/149 (30%), Positives = 71/149 (47%)
Query: 197 HRDTNRPIFRPRLVEALKGVPCKQVTAG--LNFTGFLTIRGHVHTCGSNTHGQLGHGDTL 254
+R+ + ++ P L GV + V +G + +T G + + G N GQLGHGDT
Sbjct: 129 YRNLGQNLWGPHRYGCLAGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTK 188
Query: 255 DRPTPKSIAPLE-EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPR 313
P+ I L EV +V A G ++ LA+T G V++FG LG G Q D + P
Sbjct: 189 RVEAPRLIEGLSHEV--IVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTDAV-PS 245
Query: 314 AIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
Q G + +++ G E + +D G
Sbjct: 246 PAQIMYN-GQPITKMACGAEFSMIMDCKG 273
Score = 133 (51.9 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 39/132 (29%), Positives = 65/132 (49%)
Query: 122 HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--ENHAAFV 178
H+LLI+ ++S G + G LGHG T+ V R+ +H V VSA+ NH +
Sbjct: 161 HSLLITTEGKLWSWGRNEKGQLGHGD--TKRVEAPRL-IEGLSHEVIVSAACGRNHTLAL 217
Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
++G VF G+N G + + P + G P ++ G F+ + +G+++
Sbjct: 218 TETGSVFAFGENKMGQLGLGNQTDAVPSPAQI-MYNGQPITKMACGAEFSMIMDCKGNLY 276
Query: 239 TCGSNTHGQLGH 250
+ G +GQLGH
Sbjct: 277 SFGCPEYGQLGH 288
Score = 95 (38.5 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 24/78 (30%), Positives = 39/78 (50%)
Query: 254 LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPR 313
+++ I P+ V V +A G ++ L + V+S+G G LGH EQ DE+ PR
Sbjct: 316 IEKTKDGQILPVPNV-VVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPR 374
Query: 314 AIQTFRRKGIHVVRVSAG 331
++ F G ++ AG
Sbjct: 375 LVKLFDFPGRGASQIYAG 392
Score = 84 (34.6 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 32/128 (25%), Positives = 56/128 (43%)
Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQI 274
V + V G N T L + V + G +G+LGH + D P+ + + G QI
Sbjct: 330 VVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQI 389
Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 334
AG + AV+ G ++ +G+ + + + P+A+Q G + ++ G
Sbjct: 390 YAGYTCSFAVSEVGGLFFWGATNT------SRESTMYPKAVQDLC--GWRIRSLACGKSS 441
Query: 335 V-VALDSS 341
+ VA D S
Sbjct: 442 IIVAADES 449
Score = 77 (32.2 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 30/128 (23%), Positives = 61/128 (47%)
Query: 87 NGNWKRVL--RFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLG 143
+G+ KRV R ++ + H +++ ++A GR HTL ++ + SVF+ G + G LG
Sbjct: 184 HGDTKRVEAPRLIEGLSH--EVIVSAA------CGRNHTLALTETGSVFAFGENKMGQLG 235
Query: 144 HGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRP 203
G +T S +I + + + +++ + + G +++ G GH +
Sbjct: 236 LGNQTDAVPSPAQIMY-NGQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKF 294
Query: 204 IFRPRLVE 211
I R + +E
Sbjct: 295 IARAQRIE 302
>RGD|1308467 [details] [associations]
symbol:Rcbtb1 "regulator of chromosome condensation (RCC1) and
BTB (POZ) domain containing protein 1" species:10116 "Rattus
norvegicus" [GO:0005737 "cytoplasm" evidence=IEA;ISO]
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097
SMART:SM00225 RGD:1308467 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:CH474049
GeneTree:ENSGT00700000104208 CTD:55213 KO:K11494 OMA:NCSNCLG
OrthoDB:EOG4MSCXX IPI:IPI00364409 RefSeq:NP_001101850.1
UniGene:Rn.229110 Ensembl:ENSRNOT00000037800 GeneID:361050
KEGG:rno:361050 UCSC:RGD:1308467 NextBio:675026 Uniprot:D4AD40
Length = 531
Score = 182 (69.1 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 57/216 (26%), Positives = 90/216 (41%)
Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
+ VF G + LG G + V ++ + +S S H + G V+
Sbjct: 40 SDEVFVFGLNYSNCLGTGDNQSTLVP-KKLEALCGKRIKSLSYGSGPHVLLSTEDGVVYA 98
Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
G N G+ TN+ I ++ L +V G + + L G + G N G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPIQVCTNLLVKQVVEVACGSHHSMALAADGELFAWGYNNCG 158
Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
Q+G G T ++PTP+ + VV IA G + +AV +G VY +G N LG G
Sbjct: 159 QVGSGSTANQPTPRKVTNCLHTKKVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNN 218
Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
++L P + G+ V ++ G H +AL G
Sbjct: 219 GNQLTPVRVAALH--GVCVNQIVCGYAHTLALTDEG 252
Score = 179 (68.1 bits), Expect = 7.2e-11, P = 7.2e-11
Identities = 58/195 (29%), Positives = 91/195 (46%)
Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
+++ G +H++ L ++ +F+ G + CG +G G Q N VV ++ +
Sbjct: 131 VEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKKVVNIACGQ 190
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
+ VL SG+V+ G N + G + + P V AL GV Q+ G T LT
Sbjct: 191 TSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQL-TPVRVAALHGVCVNQIVCGYAHTLALT 249
Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY--MLAVTGNGVV 290
G ++ G+NT+GQLG G + +P I + E V++IAA S A T G V
Sbjct: 250 DEGLLYAWGANTYGQLGTGSKNNLLSPTQI--MVEKERVIEIAACHSTHTSAAKTQGGHV 307
Query: 291 YSFGS--GSNFCLGH 303
Y +G G + L H
Sbjct: 308 YMWGQCRGQSVILPH 322
Score = 172 (65.6 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 60/225 (26%), Positives = 106/225 (47%)
Query: 122 HTLLISNSSV-FSCGSSLCGVLGHGPETTQCVSFTRI--NFPSAAHVVQVSASENHAAFV 178
H LL + V ++ G + LG+G T Q ++ ++ N VV+V+ +H+ +
Sbjct: 86 HVLLSTEDGVVYAWGHNGYSQLGNGT-TNQGIAPIQVCTNL-LVKQVVEVACGSHHSMAL 143
Query: 179 LQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
G++F G N+ G T N+P R ++ L + G + + G V
Sbjct: 144 AADGELFAWGYNNCGQVGSGSTANQPTPR-KVTNCLHTKKVVNIACGQTSSMAVLDSGEV 202
Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
+ G N +GQLG G+ ++ TP +A L V V QI G ++ LA+T G++Y++G+ +
Sbjct: 203 YGWGYNGNGQLGLGNNGNQLTPVRVAALHGV-CVNQIVCGYAHTLALTDEGLLYAWGANT 261
Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
LG G +++ L P I + + I + + H A + G
Sbjct: 262 YGQLGTGSKNNLLSPTQIMVEKERVIEIA--ACHSTHTSAAKTQG 304
Score = 166 (63.5 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 55/183 (30%), Positives = 87/183 (47%)
Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
A V +SASE A +V S +VF G N S C G D N+ P+ +EAL G K ++
Sbjct: 24 ACVFGISASE--AIYVTDSDEVFVFGLNYSNCLGTGD-NQSTLVPKKLEALCGKRIKSLS 80
Query: 223 AGLNFTGFLTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
G L+ G V+ G N + QLG+G T P + V VV++A G +
Sbjct: 81 YGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLVKQVVEVACGSHHS 140
Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
+A+ +G ++++G + +G G ++ PR + VV ++ G +A+ S
Sbjct: 141 MALAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTK-KVVNIACGQTSSMAVLDS 199
Query: 342 GYV 344
G V
Sbjct: 200 GEV 202
>ZFIN|ZDB-GENE-040426-2213 [details] [associations]
symbol:rcc2 "regulator of chromosome condensation
2" species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-040426-2213 GO:GO:0005730 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GeneTree:ENSGT00700000104160 EMBL:BC066628
IPI:IPI00486648 RefSeq:NP_998341.1 UniGene:Dr.828
ProteinModelPortal:Q6NYE2 STRING:Q6NYE2 PRIDE:Q6NYE2
Ensembl:ENSDART00000010647 GeneID:406455 KEGG:dre:406455 CTD:55920
HOGENOM:HOG000232061 HOVERGEN:HBG080538 InParanoid:Q6NYE2
OMA:FGENKLG OrthoDB:EOG4DNF4B NextBio:20818048 ArrayExpress:Q6NYE2
Bgee:Q6NYE2 Uniprot:Q6NYE2
Length = 495
Score = 174 (66.3 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 53/149 (35%), Positives = 72/149 (48%)
Query: 198 RDTNRPIFRPRLVEALKGVPCKQVTAG--LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD 255
R+ + ++ P L V V +G + +T G + + G N GQLGHGDT
Sbjct: 103 RNLGQNLWGPHRYGCLSDVQVSCVVSGPCAAHSLIITTEGKLWSWGRNDKGQLGHGDTKR 162
Query: 256 RPTPKSIAPL-EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE-LQPR 313
PK I L EEV +V A G ++ LA+T NG VY+FG LG G Q D L P
Sbjct: 163 LEAPKLIEGLGEEV--IVAAACGRNHTLALTENGTVYTFGENKLGQLGQGNQTDAVLSPA 220
Query: 314 AIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
IQ G +V+V+ G E + +D G
Sbjct: 221 TIQY---NGQPIVKVACGAEFSMIVDCKG 246
Score = 159 (61.0 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 44/131 (33%), Positives = 63/131 (48%)
Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
H+ + G++++ G N GH DT R + P+L+E L G N T LT
Sbjct: 134 HSLIITTEGKLWSWGRNDKGQLGHGDTKR-LEAPKLIEGLGEEVIVAAACGRNHTLALTE 192
Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLAVTGNGVVYS 292
G V+T G N GQLG G+ D S A ++ G +V++A G + + V G +YS
Sbjct: 193 NGTVYTFGENKLGQLGQGNQTDAVL--SPATIQYNGQPIVKVACGAEFSMIVDCKGNLYS 250
Query: 293 FGSGSNFCLGH 303
FG LGH
Sbjct: 251 FGCPEYGQLGH 261
Score = 133 (51.9 bits), Expect = 3.3e-11, Sum P(2) = 3.3e-11
Identities = 34/130 (26%), Positives = 63/130 (48%)
Query: 122 HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
H+L+I+ ++S G + G LGHG +T + + I +V + NH + +
Sbjct: 134 HSLIITTEGKLWSWGRNDKGQLGHG-DTKRLEAPKLIEGLGEEVIVAAACGRNHTLALTE 192
Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
+G V+T G+N G + + P ++ G P +V G F+ + +G++++
Sbjct: 193 NGTVYTFGENKLGQLGQGNQTDAVLSPATIQ-YNGQPIVKVACGAEFSMIVDCKGNLYSF 251
Query: 241 GSNTHGQLGH 250
G +GQLGH
Sbjct: 252 GCPEYGQLGH 261
Score = 94 (38.1 bits), Expect = 3.3e-11, Sum P(2) = 3.3e-11
Identities = 22/69 (31%), Positives = 34/69 (49%)
Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
+A G ++ L + V+S+G G LGH EQ DE+ PR ++ F G ++ G +
Sbjct: 308 VACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGATQIYCGYQ 367
Query: 334 HVVALDSSG 342
AL G
Sbjct: 368 CSFALSEMG 376
>DICTYBASE|DDB_G0282633 [details] [associations]
symbol:DDB_G0282633 "putative guanine nucleotide
exchange factor (GEF)" species:44689 "Dictyostelium discoideum"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088 PROSITE:PS50097
SMART:SM00225 SMART:SM00248 dictyBase:DDB_G0282633
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AAFI02000047 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
RefSeq:XP_640165.2 ProteinModelPortal:Q54S74
EnsemblProtists:DDB0234270 GeneID:8623703 KEGG:ddi:DDB_G0282633
OMA:RLAYLCN ProtClustDB:CLSZ2501699 Uniprot:Q54S74
Length = 919
Score = 185 (70.2 bits), Expect = 3.6e-11, P = 3.6e-11
Identities = 69/265 (26%), Positives = 128/265 (48%)
Query: 104 SDIVETSAGNMQ-ITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRIN--- 158
+ I+E S ++ I G +H+L + + V+S G+ G LG G + + + T I+
Sbjct: 238 TQILELSNKRIKSIACGTHHSLAMDDLGQVYSWGNGASGRLGLGNDFSIVPTPTLISVIN 297
Query: 159 -FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPI-FR--PRLVEALK 214
F S ++A +++ + +G V++ G N + G+++ + + F+ P+ + ++
Sbjct: 298 RFGSNEIATAIAAGCDNSMILGSNGDVYSFGSNLHYKLGYKECDGALGFQSTPKKIPSI- 356
Query: 215 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIA---------- 263
+ K + + FL ++G V+TCGS+T+G+LG + P+ ++
Sbjct: 357 -LQMKSIACASWHSVFLDLKGRVYTCGSSTNGRLGRAISSYSSFYPERVSITNSKTNGTL 415
Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH----GEQHDELQPRAIQTFR 319
P EEV + QIA G ++ ++ +G +YS+G + LG G QP+ +
Sbjct: 416 PQEEV--IKQIACGTNFTTVLSESGSLYSWGVNTKSQLGLINLVGISEYYSQPKLVTALN 473
Query: 320 RKGIHVVRVSAGDEHVVALDSSGYV 344
IH V GD+HVVAL G V
Sbjct: 474 PYTIHSFAV--GDQHVVALSDQGEV 496
Score = 166 (63.5 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 56/206 (27%), Positives = 95/206 (46%)
Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSF--TRINFPSAAHVVQVSASE 172
I G +++++ SN V+S GS+L LG+ E + F T PS + ++ +
Sbjct: 308 IAAGCDNSMILGSNGDVYSFGSNLHYKLGY-KECDGALGFQSTPKKIPSILQMKSIACAS 366
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG-----VP----CKQVTA 223
H+ F+ G+V+TCG +++ G ++ F P V +P KQ+
Sbjct: 367 WHSVFLDLKGRVYTCGSSTNGRLGRAISSYSSFYPERVSITNSKTNGTLPQEEVIKQIAC 426
Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGH----GDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
G NFT L+ G +++ G NT QLG G + PK + L ++ A G
Sbjct: 427 GTNFTTVLSESGSLYSWGVNTKSQLGLINLVGISEYYSQPKLVTALNPY-TIHSFAVGDQ 485
Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGE 305
+++A++ G V+ +G S G GE
Sbjct: 486 HVVALSDQGEVFCYGDNSTLQCGFGE 511
Score = 157 (60.3 bits), Expect = 4.9e-08, P = 4.9e-08
Identities = 56/229 (24%), Positives = 94/229 (41%)
Query: 124 LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV-VQVSASENHAAFVLQSG 182
+ + +S++ G L L C T + F +Q +N+ + +G
Sbjct: 158 MTMEQTSIYQWGQILTSSL----TLKSCAKATNMLFNDEISAPIQTEFGQNYNLILTDTG 213
Query: 183 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
V++ G S GH+ R + P + L K + G + + + G V++ G+
Sbjct: 214 AVYSSGLCSYGKTGHKK-KRDVLIPTQILELSNKRIKSIACGTHHSLAMDDLGQVYSWGN 272
Query: 243 NTHGQLGHGDTLDR-PTPKSIAPLEEVGS---VVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
G+LG G+ PTP I+ + GS IAAG + + NG VYSFGS +
Sbjct: 273 GASGRLGLGNDFSIVPTPTLISVINRFGSNEIATAIAAGCDNSMILGSNGDVYSFGSNLH 332
Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSLC 347
+ LG+ E L ++ + + ++ H V LD G V C
Sbjct: 333 YKLGYKECDGALGFQSTPKKIPSILQMKSIACASWHSVFLDLKGRVYTC 381
Score = 127 (49.8 bits), Expect = 0.00010, P = 0.00010
Identities = 61/252 (24%), Positives = 108/252 (42%)
Query: 108 ETSAGNMQITTGR-YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV 166
E SA +Q G+ Y+ +L +V+S G G GH + + T+I S +
Sbjct: 192 EISAP-IQTEFGQNYNLILTDTGAVYSSGLCSYGKTGHKKKRDVLIP-TQILELSNKRIK 249
Query: 167 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT---- 222
++ +H+ + GQV++ G+ +S G + + P L+ + ++
Sbjct: 250 SIACGTHHSLAMDDLGQVYSWGNGASGRLGLGNDFSIVPTPTLISVINRFGSNEIATAIA 309
Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGD---TLD-RPTPKSIAPLEEVGSVVQIAAGP 278
AG + + L G V++ GSN H +LG+ + L + TPK I + ++ S+ A+
Sbjct: 310 AGCDNSMILGSNGDVYSFGSNLHYKLGYKECDGALGFQSTPKKIPSILQMKSIA-CASWH 368
Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRRK--GI----HVVR-VSA 330
S L + G VY+ GS +N LG + P + K G V++ ++
Sbjct: 369 SVFLDLKGR--VYTCGSSTNGRLGRAISSYSSFYPERVSITNSKTNGTLPQEEVIKQIAC 426
Query: 331 GDEHVVALDSSG 342
G L SG
Sbjct: 427 GTNFTTVLSESG 438
>TAIR|locus:2146142 [details] [associations]
symbol:AT5G16040 "AT5G16040" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008536 "Ran GTPase binding" evidence=ISS]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002688 EMBL:AL391145
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 UniGene:At.19750
UniGene:At.49027 EMBL:BT028960 IPI:IPI00525887 PIR:T51387
RefSeq:NP_197108.1 HSSP:O87916 ProteinModelPortal:Q9LFS0 SMR:Q9LFS0
PRIDE:Q9LFS0 EnsemblPlants:AT5G16040.1 GeneID:831461
KEGG:ath:AT5G16040 TAIR:At5g16040 InParanoid:Q9LFS0 OMA:TTGHPME
PhylomeDB:Q9LFS0 ProtClustDB:CLSN2686124 Genevestigator:Q9LFS0
Uniprot:Q9LFS0
Length = 396
Score = 178 (67.7 bits), Expect = 5.0e-11, P = 5.0e-11
Identities = 69/240 (28%), Positives = 109/240 (45%)
Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTR--INFPSAAH----VV 166
+Q G +H L + + ++ G + G G P + R I P V
Sbjct: 94 VQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPSKDETGRPVRRDIVIPKRCAQQLTVR 153
Query: 167 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
QV+A H+ + + G V+T G + G D + I P V+ L+ V V A N
Sbjct: 154 QVAAGGTHSVVLTREGYVWTWGQ--PWPPG--DIKQ-ISVPVRVQGLENVRLIAVGAFHN 208
Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
L G + G+N +GQLG GDT R P + L+++ ++V IAAG + A+T
Sbjct: 209 LA--LKEDGTLWAWGNNEYGQLGTGDTQPRSYPIPVQGLDDL-TLVDIAAGGWHSTALTN 265
Query: 287 NGVVYSFGSGSNFCLGHGE--QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
G VY +G G + LG G+ + ++ P+ + G +++VS G H VAL G +
Sbjct: 266 EGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLA--GEDIIQVSCGGTHSVALTRDGRI 323
Score = 141 (54.7 bits), Expect = 8.1e-07, P = 8.1e-07
Identities = 44/151 (29%), Positives = 76/151 (50%)
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
++ V A N A + + G ++ G+N G DT +P P V+ L + + AG
Sbjct: 200 LIAVGAFHNLA--LKEDGTLWAWGNNEYGQLGTGDT-QPRSYPIPVQGLDDLTLVDIAAG 256
Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT---PKSIAPLEEVGSVVQIAAGPSYM 281
+ LT G V+ G HG+LG GD D+ + P+ + L ++Q++ G ++
Sbjct: 257 GWHSTALTNEGEVYGWGRGEHGRLGFGDN-DKSSKMLPQKVNLLAGE-DIIQVSCGGTHS 314
Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQP 312
+A+T +G ++SFG G + LG+G + QP
Sbjct: 315 VALTRDGRIFSFGRGDHGRLGYGRKVTTGQP 345
Score = 129 (50.5 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 50/177 (28%), Positives = 76/177 (42%)
Query: 125 LISNSSVFSCGSSLCGVLGHGP-ETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 183
+ S +SV + GS G LG G E + S P V V S N A + G+
Sbjct: 1 MASATSVIAWGSGEDGQLGLGTDEEKELASVVDALEPFNVRSV-VGGSRNSLA-ICDDGK 58
Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
+FT G N GH + P LV++L V Q G + +G + G N
Sbjct: 59 LFTWGWNQRGTLGHPPETKTESTPSLVKSLANVKIVQAAIGGWHCLAVDDQGRAYAWGGN 118
Query: 244 THGQLGHGDTLD---RPTPKSIAPLEEVG---SVVQIAAGPSYMLAVTGNGVVYSFG 294
+GQ G + D RP + I + +V Q+AAG ++ + +T G V+++G
Sbjct: 119 EYGQCGEEPSKDETGRPVRRDIVIPKRCAQQLTVRQVAAGGTHSVVLTREGYVWTWG 175
Score = 122 (48.0 bits), Expect = 0.00011, P = 0.00011
Identities = 45/142 (31%), Positives = 64/142 (45%)
Query: 209 LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEE 267
+V+AL+ + V G + + G + T G N G LGH +T TP + L
Sbjct: 31 VVDALEPFNVRSVVGGSRNSLAICDDGKLFTWGWNQRGTLGHPPETKTESTPSLVKSLAN 90
Query: 268 VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL-QP--RAIQTFRR--KG 322
V +VQ A G + LAV G Y++G G DE +P R I +R +
Sbjct: 91 V-KIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPSKDETGRPVRRDIVIPKRCAQQ 149
Query: 323 IHVVRVSAGDEHVVALDSSGYV 344
+ V +V+AG H V L GYV
Sbjct: 150 LTVRQVAAGGTHSVVLTREGYV 171
>TAIR|locus:2079147 [details] [associations]
symbol:AT3G47660 "AT3G47660" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0008536
"Ran GTPase binding" evidence=ISS] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000306 Pfam:PF01363 SMART:SM00064
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002686 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0046872 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 IPI:IPI00548806 RefSeq:NP_190350.4 UniGene:At.48747
UniGene:At.66547 ProteinModelPortal:F4JCN3 SMR:F4JCN3 PRIDE:F4JCN3
EnsemblPlants:AT3G47660.1 GeneID:823920 KEGG:ath:AT3G47660
OMA:CLSHEIS ArrayExpress:F4JCN3 Uniprot:F4JCN3
Length = 954
Score = 183 (69.5 bits), Expect = 6.3e-11, P = 6.3e-11
Identities = 63/241 (26%), Positives = 106/241 (43%)
Query: 116 ITTG-RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASEN 173
I+ G Y L+ ++S G G LGHG V ++ V+++ E
Sbjct: 304 ISCGTNYAVLVTKQGQMYSWGEESGGRLGHG--VCSYVPHPKLIDEFNGSTVELADCGEF 361
Query: 174 HAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRP-RLVEALKGVPCKQVTAGLNFTGF 230
H V SG ++ GD +++ G + ++P R++ ++G+ K ++ G T F
Sbjct: 362 HTCAVTASGDLYAWGDGDHNAGLLG-LGSGASHWKPVRILGQMEGIYVKAISCGPWHTAF 420
Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV------ 284
+T G + T G T G LGHGD + P+ + L ++ + A G + AV
Sbjct: 421 VTSEGKLFTFGDGTFGALGHGDRISTNIPREVEALNGCRTI-KAACGVWHSAAVVSVFGE 479
Query: 285 -TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
T +G ++++G G + LGHG+ L P + +V+ G VAL SG
Sbjct: 480 ATSSGKLFTWGDGDDGRLGHGDIECRLIPSCVTELDTTSFQ--QVACGQSITVALSMSGQ 537
Query: 344 V 344
V
Sbjct: 538 V 538
Score = 175 (66.7 bits), Expect = 5.0e-10, P = 5.0e-10
Identities = 80/318 (25%), Positives = 129/318 (40%)
Query: 39 SKTFGGSHGLYPQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQ 98
+K GSH PQ+ + SQ L ++ EL+++ + + + +
Sbjct: 169 AKKASGSHCNTPQRLGKVFSEVLSQTAVLKALSLD-------ELVHKPHTSPPETIEN-R 220
Query: 99 SVEHSSDIVETSAGNMQITT-----GRYHTLLISNSSVFSCGSSLC-GVLGHGPETTQCV 152
HSS V+TS ++ G L S VF G S+ G+LG G +
Sbjct: 221 PTNHSSPGVDTSKYSISSAVSSSSQGSTFEDLKSLCDVFVWGESIGDGLLGGGMHKSGSS 280
Query: 153 S--FTRINFPSA--AHVV----QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPI 204
S T P +HV +S N+A V + GQ+++ G+ S GH + +
Sbjct: 281 SSLMTDSFLPKVLKSHVALDAQSISCGTNYAVLVTKQGQMYSWGEESGGRLGHGVCSY-V 339
Query: 205 FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI 262
P+L++ G + G T +T G ++ G H G LG G P I
Sbjct: 340 PHPKLIDEFNGSTVELADCGEFHTCAVTASGDLYAWGDGDHNAGLLGLGSGASHWKPVRI 399
Query: 263 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
E V I+ GP + VT G +++FG G+ LGHG++ PR ++ G
Sbjct: 400 LGQMEGIYVKAISCGPWHTAFVTSEGKLFTFGDGTFGALGHGDRISTNIPREVEALN--G 457
Query: 323 IHVVRVSAGDEHVVALDS 340
++ + G H A+ S
Sbjct: 458 CRTIKAACGVWHSAAVVS 475
Score = 168 (64.2 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 74/296 (25%), Positives = 120/296 (40%)
Query: 56 LVDLAASQLCALHS---IYAGMSRNVQIELLNRCNG--NWKRVLRFLQSVEHSSDIVETS 110
L D CA+ + +YA + LL +G +WK V R L +E +
Sbjct: 355 LADCGEFHTCAVTASGDLYAWGDGDHNAGLLGLGSGASHWKPV-RILGQMEG----IYVK 409
Query: 111 AGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
A I+ G +HT + S +F+ G G LGHG + + + + ++ +
Sbjct: 410 A----ISCGPWHTAFVTSEGKLFTFGDGTFGALGHGDRISTNIP-REVEALNGCRTIKAA 464
Query: 170 ASENHAAFVLQ-------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
H+A V+ SG++FT GD GH D + P V L +QV
Sbjct: 465 CGVWHSAAVVSVFGEATSSGKLFTWGDGDDGRLGHGDIECRLI-PSCVTELDTTSFQQVA 523
Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
G + T L++ G V+ G+ H D + P+ I V ++A G ++
Sbjct: 524 CGQSITVALSMSGQVYAMGT---ADPSH-DIVRAPS--CIEGGLGKSFVQEVACGFHHIA 577
Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
+ VY++G GSN LGHG+ P ++ KG V +V G + +
Sbjct: 578 VLNSKAEVYTWGKGSNGQLGHGDTEYRCMPTLVKAL--KGKQVRKVVCGSNYTATI 631
Score = 152 (58.6 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 41/141 (29%), Positives = 72/141 (51%)
Query: 205 FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
F P+++++ + + ++ G N+ +T +G +++ G + G+LGHG P PK I
Sbjct: 288 FLPKVLKSHVALDAQSISCGTNYAVLVTKQGQMYSWGEESGGRLGHGVCSYVPHPKLIDE 347
Query: 265 LEEVGSVVQIA-AGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRK 321
GS V++A G + AVT +G +Y++G G + LG G +P I + +
Sbjct: 348 FN--GSTVELADCGEFHTCAVTASGDLYAWGDGDHNAGLLGLGSGASHWKPVRILG-QME 404
Query: 322 GIHVVRVSAGDEHVVALDSSG 342
GI+V +S G H + S G
Sbjct: 405 GIYVKAISCGPWHTAFVTSEG 425
Score = 119 (46.9 bits), Expect = 0.00080, P = 0.00080
Identities = 45/178 (25%), Positives = 75/178 (42%)
Query: 127 SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 186
S+ +F+ G G LGHG + + + + QV+ ++ + SGQV+
Sbjct: 482 SSGKLFTWGDGDDGRLGHGDIECRLIPSCVTELDTTSFQ-QVACGQSITVALSMSGQVYA 540
Query: 187 CGDNSSFCCGHRDTNRPIFR-PRLVEALKGVP-CKQVTAGLNFTGFLTIRGHVHTCGSNT 244
G D + I R P +E G ++V G + L + V+T G +
Sbjct: 541 MGT--------ADPSHDIVRAPSCIEGGLGKSFVQEVACGFHHIAVLNSKAEVYTWGKGS 592
Query: 245 HGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
+GQLGHGDT R P + L+ V ++ G +Y + + + G+ S C G
Sbjct: 593 NGQLGHGDTEYRCMPTLVKALKGK-QVRKVVCGSNYTATICLHKPIT--GTDSTKCSG 647
>MGI|MGI:1919784 [details] [associations]
symbol:Rcc2 "regulator of chromosome condensation 2"
species:10090 "Mus musculus" [GO:0000775 "chromosome, centromeric
region" evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0051301 "cell division"
evidence=IEA] MGI:MGI:1919784 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 GO:GO:0000775 GO:GO:0005730 GO:GO:0051301
GO:GO:0007067 GO:GO:0005819 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0005874 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 EMBL:AL954710 eggNOG:COG5184
GeneTree:ENSGT00700000104160 CTD:55920 HOGENOM:HOG000232061
HOVERGEN:HBG080538 OMA:FGENKLG OrthoDB:EOG4DNF4B EMBL:AK076040
EMBL:BC086666 EMBL:AK129370 IPI:IPI00222509 RefSeq:NP_776292.1
UniGene:Mm.253 ProteinModelPortal:Q8BK67 SMR:Q8BK67 STRING:Q8BK67
PhosphoSite:Q8BK67 PaxDb:Q8BK67 PRIDE:Q8BK67
Ensembl:ENSMUST00000038893 Ensembl:ENSMUST00000071169 GeneID:108911
KEGG:mmu:108911 UCSC:uc008vna.2 InParanoid:A2AWQ3 ChiTaRS:RCC2
NextBio:361459 Bgee:Q8BK67 CleanEx:MM_RCC2 Genevestigator:Q8BK67
GermOnline:ENSMUSG00000040945 Uniprot:Q8BK67
Length = 520
Score = 164 (62.8 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 51/160 (31%), Positives = 72/160 (45%)
Query: 145 GPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPI 204
GP C+S R+ VV S + H+ + G++++ G N GH DT R +
Sbjct: 136 GPHRYGCLSGVRVRT-----VVSGSCAA-HSLLITTEGKLWSWGRNEKGQLGHGDTKR-V 188
Query: 205 FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIA 263
PRL+EAL G N T LT G V G N GQLG G+ D P+P I
Sbjct: 189 EAPRLIEALSHEAIVLAACGRNHTLALTDTGSVFAFGENKMGQLGLGNQTDAVPSPAQI- 247
Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 303
+ + ++A G + + + G +YSFG LGH
Sbjct: 248 -MYNGQPITKMACGAEFSMLMDCKGNLYSFGCPEYGQLGH 286
Score = 153 (58.9 bits), Expect = 5.9e-08, P = 5.9e-08
Identities = 44/148 (29%), Positives = 70/148 (47%)
Query: 197 HRDTNRPIFRPRLVEALKGVPCKQVTAG--LNFTGFLTIRGHVHTCGSNTHGQLGHGDTL 254
+R+ + ++ P L GV + V +G + +T G + + G N GQLGHGDT
Sbjct: 127 YRNLGQNLWGPHRYGCLSGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTK 186
Query: 255 DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRA 314
P+ I L ++V A G ++ LA+T G V++FG LG G Q D + P
Sbjct: 187 RVEAPRLIEALSHE-AIVLAACGRNHTLALTDTGSVFAFGENKMGQLGLGNQTDAV-PSP 244
Query: 315 IQTFRRKGIHVVRVSAGDEHVVALDSSG 342
Q G + +++ G E + +D G
Sbjct: 245 AQIMYN-GQPITKMACGAEFSMLMDCKG 271
Score = 126 (49.4 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 36/132 (27%), Positives = 63/132 (47%)
Query: 122 HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH--VVQVSASENHAAFV 178
H+LLI+ ++S G + G LGHG T+ V R+ + +H +V + NH +
Sbjct: 159 HSLLITTEGKLWSWGRNEKGQLGHGD--TKRVEAPRL-IEALSHEAIVLAACGRNHTLAL 215
Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
+G VF G+N G + + P + G P ++ G F+ + +G+++
Sbjct: 216 TDTGSVFAFGENKMGQLGLGNQTDAVPSPAQI-MYNGQPITKMACGAEFSMLMDCKGNLY 274
Query: 239 TCGSNTHGQLGH 250
+ G +GQLGH
Sbjct: 275 SFGCPEYGQLGH 286
Score = 97 (39.2 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 24/78 (30%), Positives = 39/78 (50%)
Query: 254 LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPR 313
+++ I P+ V V +A G ++ L + V+S+G G LGH EQ DE+ PR
Sbjct: 314 IEKTKDGQILPVPNV-VVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPR 372
Query: 314 AIQTFRRKGIHVVRVSAG 331
++ F G ++ AG
Sbjct: 373 LVKLFDFPGRGATQIYAG 390
Score = 86 (35.3 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 32/128 (25%), Positives = 56/128 (43%)
Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQI 274
V + V G N T L + V + G +G+LGH + D P+ + + G QI
Sbjct: 328 VVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGATQI 387
Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 334
AG + AV+ G ++ +G+ + + + P+A+Q G + ++ G
Sbjct: 388 YAGYTCSFAVSEVGGLFFWGATNT------SRESTMYPKAVQDLC--GWRIRSLACGKSS 439
Query: 335 V-VALDSS 341
+ VA D S
Sbjct: 440 IIVAADES 447
Score = 75 (31.5 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 29/128 (22%), Positives = 60/128 (46%)
Query: 87 NGNWKRVL--RFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLG 143
+G+ KRV R ++++ H + ++ GR HTL ++++ SVF+ G + G LG
Sbjct: 182 HGDTKRVEAPRLIEALSHEAIVLAAC--------GRNHTLALTDTGSVFAFGENKMGQLG 233
Query: 144 HGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRP 203
G +T S +I + + + +++ + + G +++ G GH +
Sbjct: 234 LGNQTDAVPSPAQIMY-NGQPITKMACGAEFSMLMDCKGNLYSFGCPEYGQLGHNSDGKF 292
Query: 204 IFRPRLVE 211
I R + +E
Sbjct: 293 IARAQRIE 300
>UNIPROTKB|Q86SG6 [details] [associations]
symbol:NEK8 "Serine/threonine-protein kinase Nek8"
species:9606 "Homo sapiens" [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0072372 "primary cilium" evidence=ISS]
InterPro:IPR000719 InterPro:IPR002290 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005524 GO:GO:0005737 GO:GO:0005856
GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0072372
EMBL:CH471159 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 KO:K08857 Orphanet:655 EMBL:AC010761 CTD:284086
HOGENOM:HOG000006908 HOVERGEN:HBG098799 EMBL:AY242354 EMBL:AY267371
EMBL:BC112240 EMBL:BC113705 EMBL:AL833909 IPI:IPI00328397
RefSeq:NP_835464.1 UniGene:Hs.448468 ProteinModelPortal:Q86SG6
SMR:Q86SG6 IntAct:Q86SG6 STRING:Q86SG6 PhosphoSite:Q86SG6
DMDM:34098463 PaxDb:Q86SG6 PRIDE:Q86SG6 DNASU:284086
Ensembl:ENST00000268766 GeneID:284086 KEGG:hsa:284086
UCSC:uc002hcp.3 GeneCards:GC17P027055 HGNC:HGNC:13387 HPA:HPA040661
HPA:HPA040679 MIM:609799 MIM:613824 neXtProt:NX_Q86SG6
PharmGKB:PA38361 InParanoid:Q86SG6 OMA:EREVFAW OrthoDB:EOG4PZJ65
GenomeRNAi:284086 NextBio:94527 ArrayExpress:Q86SG6 Bgee:Q86SG6
CleanEx:HS_NEK8 Genevestigator:Q86SG6 GermOnline:ENSG00000160602
Uniprot:Q86SG6
Length = 692
Score = 177 (67.4 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 60/201 (29%), Positives = 89/201 (44%)
Query: 155 TRINFPSA-AHVVQVSASENHAAFVLQSGQVFTC------GDNSSFCCGHRDTNRPIFRP 207
T + P VVQV+A A V +SG++ S G + +P F
Sbjct: 323 TPLRLPMLNTEVVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGGSLLPGAVEQPQPQFIS 382
Query: 208 RLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE 267
R +E GV K V G FT LT RG + T GS ++G LGHG D P + L
Sbjct: 383 RFLEGQSGVTIKHVACGDFFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQPTIVEAL-- 440
Query: 268 VG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
+G +VQ+A G S++LA++ ++++G G + LG G + P+ + G
Sbjct: 441 LGYEMVQVACGASHVLALSTERELFAWGRGDSGRLGLGTRESHSCPQQVPM--PPGQEAQ 498
Query: 327 RVSAGDEHVVALDSSGYVSLC 347
RV G + + L G C
Sbjct: 499 RVVCGIDSSMILTVPGQALAC 519
Score = 166 (63.5 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 62/246 (25%), Positives = 105/246 (42%)
Query: 116 ITTGRYHTLLISNSSVF-SCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
+ G + T +++ + + GS G LGHG T T + +VQV+ +H
Sbjct: 396 VACGDFFTACLTDRGIIMTFGSGSNGCLGHG-SLTDISQPTIVEALLGYEMVQVACGASH 454
Query: 175 AAFVLQSGQVFTCG--DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
+ ++F G D+ G R+++ P+ V G ++V G++ + LT
Sbjct: 455 VLALSTERELFAWGRGDSGRLGLGTRESHSC---PQQVPMPPGQEAQRVVCGIDSSMILT 511
Query: 233 IRGHVHTCGSNTHGQLG--HGDTLDRPTPKS------------IAPLEEVGSVVQIAAGP 278
+ G CGSN +LG H + P P APL++ ++ I G
Sbjct: 512 VPGQALACGSNRFNKLGLDHLSLGEEPVPHQQVEEALSFTLLGSAPLDQE-PLLSIDLGT 570
Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
++ AVT +G Y+FGS + LG + P +Q +GI + V+ GD VA+
Sbjct: 571 AHSAAVTASGDCYTFGSNQHGQLGTNTRRGSRAPCKVQGL--EGIKMAMVACGDAFTVAI 628
Query: 339 DSSGYV 344
+ V
Sbjct: 629 GAESEV 634
Score = 161 (61.7 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 61/228 (26%), Positives = 93/228 (40%)
Query: 106 IVETSAGN--MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGP-ETTQCVSFTRINFPS 161
IVE G +Q+ G H L +S +F+ G G LG G E+ C ++ P
Sbjct: 436 IVEALLGYEMVQVACGASHVLALSTERELFAWGRGDSGRLGLGTRESHSCPQ--QVPMPP 493
Query: 162 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCG--HRDTNR-PIFRPRLVEALK---- 214
+V + + + GQ CG N G H P+ ++ EAL
Sbjct: 494 GQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLDHLSLGEEPVPHQQVEEALSFTLL 553
Query: 215 -GVPCKQ-----VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 268
P Q + G + +T G +T GSN HGQLG P + LE +
Sbjct: 554 GSAPLDQEPLLSIDLGTAHSAAVTASGDCYTFGSNQHGQLGTNTRRGSRAPCKVQGLEGI 613
Query: 269 GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
+ +A G ++ +A+ VYS+G G+ LG ++ L PR +Q
Sbjct: 614 -KMAMVACGDAFTVAIGAESEVYSWGKGARGRLGRRDEDAGL-PRPVQ 659
>UNIPROTKB|F1NXI7 [details] [associations]
symbol:SERGEF "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0050709 "negative regulation of protein
secretion" evidence=IEA] InterPro:IPR027048 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104160 PANTHER:PTHR22870:SF7
EMBL:AADN02030419 EMBL:AADN02030421 EMBL:AADN02030420
IPI:IPI00587804 Ensembl:ENSGALT00000010065 Uniprot:F1NXI7
Length = 231
Score = 162 (62.1 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 58/182 (31%), Positives = 85/182 (46%)
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
+ ++ H+A + +G++F CG N + G T + L AL G ++V G
Sbjct: 52 IKSIAGGGGHSAVITGAGELFVCGHNKAGQLGLNHTE-DVLCFTLCTALSGFCVQEVACG 110
Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT--PKSIAP-LEEVGSVVQIAAGPSYM 281
+FT L G V +CGSN GQLG + P P+ I L+E V IAAG +
Sbjct: 111 WDFTIILGRAGLVLSCGSNAFGQLGVPQ-ISGPCLIPQKIKQSLKE--KAVGIAAGLRHA 167
Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQP--RAIQTFRRKGIH---VVRVSAGDEHVV 336
LA T +G+V+ +G+G Q L A + KG+ V RV+AG H V
Sbjct: 168 LAATESGLVFQWGTGMASRAKRVHQGKTLPVFWAAKEPCEIKGLEDVKVKRVAAGSYHCV 227
Query: 337 AL 338
+L
Sbjct: 228 SL 229
>UNIPROTKB|I3LT85 [details] [associations]
symbol:RCC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051225 "spindle assembly" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0031492 "nucleosomal DNA binding" evidence=IEA]
[GO:0007090 "regulation of S phase of mitotic cell cycle"
evidence=IEA] [GO:0007088 "regulation of mitosis" evidence=IEA]
[GO:0007059 "chromosome segregation" evidence=IEA] [GO:0007052
"mitotic spindle organization" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005087 "Ran guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0000794 "condensed
nuclear chromosome" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IEA] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
GO:GO:0007088 GO:GO:0007059 GO:GO:0007052 GO:GO:0051225
GO:GO:0000082 GO:GO:0031965 GO:GO:0000790 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0000794 GO:GO:0005087
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0007090 GO:GO:0031492 GeneTree:ENSGT00700000104160 KO:K11493
CTD:1104 OMA:GTESCFV EMBL:FP565629 RefSeq:XP_003482053.1
Ensembl:ENSSSCT00000028011 GeneID:100621543 KEGG:ssc:100621543
Uniprot:I3LT85
Length = 421
Score = 173 (66.0 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 76/260 (29%), Positives = 113/260 (43%)
Query: 105 DIVETSAGNMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGP--ETTQCVSFTRINFPS 161
DIV+ AG M HT+ +S S V+S G + G LG E ++ V ++
Sbjct: 68 DIVQAEAGGM-------HTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVP-GKVELQE 119
Query: 162 AAHVVQVSASENHAAFVLQSGQVFTCG---DNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
VVQVSA ++H A + + G+VF G DN+ G + + P V+ +P
Sbjct: 120 K--VVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVI-GLLEPMKKSMVP--VQVQLSMPV 174
Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH--------GDT--LDRP-TPKSIAPLEE 267
+V +G + LT G ++T GS GQLG G L+R PK + L+
Sbjct: 175 VKVASGNDHLVMLTADGELYTLGSGEQGQLGRVPELFANRGGRQGLERLLVPKCVM-LKS 233
Query: 268 VGSVVQIA-----AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
GS + G + A++ G VY FG + LG P+ + +F+
Sbjct: 234 RGSRGHVRFQDAFCGAYFTFAISSEGHVYGFGLSNYHQLGTPGTESCFVPQNLTSFKNST 293
Query: 323 IHVVRVSAGDEHVVALDSSG 342
VR S G H V +DS G
Sbjct: 294 KSWVRFSGGQHHTVCMDSEG 313
Score = 149 (57.5 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 66/251 (26%), Positives = 112/251 (44%)
Query: 107 VETSAGNMQITTGRYH-TLLISNSSVFSCGSSLCGVLGHGPETTQC----VSFTRINFP- 160
V+ S +++ +G H +L ++ +++ GS G LG PE R+ P
Sbjct: 168 VQLSMPVVKVASGNDHLVMLTADGELYTLGSGEQGQLGRVPELFANRGGRQGLERLLVPK 227
Query: 161 --------SAAHV-VQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLV 210
S HV Q + + F + S G V+ G ++ G T F P+ +
Sbjct: 228 CVMLKSRGSRGHVRFQDAFCGAYFTFAISSEGHVYGFGLSNYHQLGTPGTES-CFVPQNL 286
Query: 211 EALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEE 267
+ K V + G + T + G ++ G +G+LG G+ + + P I+ L
Sbjct: 287 TSFKNSTKSWVRFSGGQHHTVCMDSEGRAYSLGRAEYGRLGLGEGAEEKSVPTLISRLPA 346
Query: 268 VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR 327
V SV A G S AVT +G V+++G G+N+ LG G++ D P + + + V+
Sbjct: 347 VSSV---ACGASVGYAVTKDGRVFAWGMGTNYQLGTGQEEDAWSPVEMTGKQLENRMVLS 403
Query: 328 VSAGDEHVVAL 338
VS+G +H V L
Sbjct: 404 VSSGGQHTVLL 414
Score = 146 (56.5 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 56/178 (31%), Positives = 84/178 (47%)
Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
V + G G LG G + + P +VQ A H + +SGQV++ G N
Sbjct: 37 VLTLGQGDVGQLGLGENVMERKKPALVPIPE--DIVQAEAGGMHTVCLSKSGQVYSFGCN 94
Query: 191 SSFCCGHRDTN--RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS--NTHG 246
G RDT+ P VE + V QV+AG + T LT G V GS + +G
Sbjct: 95 DEGALG-RDTSVEGSEMVPGKVELQEKVV--QVSAGDSHTAALTEDGRVFLWGSFRDNNG 151
Query: 247 QLGHGDTLDRPTPKSIAPLEEVGS--VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
+G L P KS+ P++ S VV++A+G +++ +T +G +Y+ GSG LG
Sbjct: 152 VIG----LLEPMKKSMVPVQVQLSMPVVKVASGNDHLVMLTADGELYTLGSGEQGQLG 205
Score = 137 (53.3 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 41/115 (35%), Positives = 59/115 (51%)
Query: 235 GHVHTCGSNTHGQLGHGDT-LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
G V T G GQLG G+ ++R P ++ P+ E +VQ AG + + ++ +G VYSF
Sbjct: 35 GLVLTLGQGDVGQLGLGENVMERKKP-ALVPIPE--DIVQAEAGGMHTVCLSKSGQVYSF 91
Query: 294 GSGSNFCLGHGE--QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSL 346
G LG + E+ P ++ + K VV+VSAGD H AL G V L
Sbjct: 92 GCNDEGALGRDTSVEGSEMVPGKVE-LQEK---VVQVSAGDSHTAALTEDGRVFL 142
>UNIPROTKB|E9PR50 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
PANTHER:PTHR22870:SF7 HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058
EMBL:AC124078 IPI:IPI00983666 ProteinModelPortal:E9PR50 SMR:E9PR50
Ensembl:ENST00000530613 ArrayExpress:E9PR50 Bgee:E9PR50
Uniprot:E9PR50
Length = 165
Score = 152 (58.6 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 56/170 (32%), Positives = 76/170 (44%)
Query: 124 LLISNSSVFSCGSSLCGVLG--HGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQS 181
+L N V SCGS+ G LG HGP +CV I VV ++A HA S
Sbjct: 1 MLTENGQVLSCGSNSFGQLGVPHGPR--RCVVPQAIELHKEK-VVCIAAGLRHAVAATAS 57
Query: 182 GQVFTCGDNSSFCCGHR---DTNRPIF----RPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
G VF G + CG R P+F P V L+ V AG + + LT
Sbjct: 58 GIVFQWGTGLA-SCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDA 116
Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYMLA 283
G V+ GSN HGQL + + P P+ I A + V I +G ++++A
Sbjct: 117 GEVYVWGSNKHGQLAN-EAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVA 165
Score = 115 (45.5 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 42/122 (34%), Positives = 61/122 (50%)
Query: 231 LTIRGHVHTCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
LT G V +CGSN+ GQLG HG P++I +E VV IAAG + +A T +G
Sbjct: 2 LTENGQVLSCGSNSFGQLGVPHGPRRC-VVPQAIELHKE--KVVCIAAGLRHAVAATASG 58
Query: 289 VVYSFGSGSNFCLGHGEQHDELQP---RAIQTFRRKGIH---VVRVSAGDEHVVALDSSG 342
+V+ +G+G C G + P A + R G+ + V AG +H +L +G
Sbjct: 59 IVFQWGTGLASC-GRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAG 117
Query: 343 YV 344
V
Sbjct: 118 EV 119
>UNIPROTKB|A7Z018 [details] [associations]
symbol:RCC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0000794 "condensed nuclear chromosome" evidence=IEA]
[GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=IEA] [GO:0051225
"spindle assembly" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031492 "nucleosomal DNA binding" evidence=IEA] [GO:0007090
"regulation of S phase of mitotic cell cycle" evidence=IEA]
[GO:0007088 "regulation of mitosis" evidence=IEA] [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0007052 "mitotic spindle
organization" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 GO:GO:0007088 GO:GO:0007059 GO:GO:0007052
GO:GO:0051225 GO:GO:0000082 GO:GO:0031965 GO:GO:0000790
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0000794
GO:GO:0005087 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 GO:GO:0007090 GO:GO:0031492
GeneTree:ENSGT00700000104160 KO:K11493 CTD:1104
HOGENOM:HOG000234341 HOVERGEN:HBG017712 OrthoDB:EOG4320Z9
EMBL:DAAA02006335 EMBL:BC153215 IPI:IPI00868581
RefSeq:NP_001098878.1 UniGene:Bt.54942 SMR:A7Z018 STRING:A7Z018
Ensembl:ENSBTAT00000032060 GeneID:534142 KEGG:bta:534142
InParanoid:A7Z018 OMA:GTESCFV NextBio:20876286 Uniprot:A7Z018
Length = 422
Score = 172 (65.6 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 75/260 (28%), Positives = 114/260 (43%)
Query: 105 DIVETSAGNMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGP--ETTQCVSFTRINFPS 161
DIV+ AG M HT+ +S S V+S G + G LG E ++ V +++
Sbjct: 68 DIVQAEAGGM-------HTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVP-GKVDLQE 119
Query: 162 AAHVVQVSASENHAAFVLQSGQVFTCG---DNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
V+QVSA ++H A + + G+VF G DN+ G + + P V+ VP
Sbjct: 120 K--VIQVSAGDSHTAALTEDGRVFLWGSFRDNNGVI-GLLEPMKKSMVP--VQVQLSVPV 174
Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH--------GDT--LDRP-TPKSIAPLEE 267
+V +G + LT+ G ++T GS GQLG G L+R PK + L+
Sbjct: 175 VKVASGNDHLVMLTVDGDLYTLGSGEQGQLGRVPELFANRGGRQGLERLLVPKCVM-LKS 233
Query: 268 VGSVVQIA-----AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
GS + G + A++ G VY FG + LG P+ + +F+
Sbjct: 234 RGSRGHVRFQDAFCGAYFTFAISSEGHVYGFGLSNYHQLGTQGTESCFVPQNLTSFKNST 293
Query: 323 IHVVRVSAGDEHVVALDSSG 342
V S G H V +DS G
Sbjct: 294 KSWVGFSGGQHHTVCMDSEG 313
Score = 148 (57.2 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 61/250 (24%), Positives = 113/250 (45%)
Query: 107 VETSAGNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQC----VSFTRINFP- 160
V+ S +++ +G H ++++ + +++ GS G LG PE R+ P
Sbjct: 168 VQLSVPVVKVASGNDHLVMLTVDGDLYTLGSGEQGQLGRVPELFANRGGRQGLERLLVPK 227
Query: 161 --------SAAHV-VQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLV 210
S HV Q + + F + S G V+ G ++ G + T F P+ +
Sbjct: 228 CVMLKSRGSRGHVRFQDAFCGAYFTFAISSEGHVYGFGLSNYHQLGTQGTES-CFVPQNL 286
Query: 211 EALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 268
+ K V + G + T + G ++ G +G+LG G+ + + ++ P +
Sbjct: 287 TSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSVPTLIP--RL 344
Query: 269 GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 328
+V +A G S AVT +G V+++G G+N+ LG G+ D P + + + V+ V
Sbjct: 345 PTVSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMTGKQLENRVVLTV 404
Query: 329 SAGDEHVVAL 338
S+G +H V L
Sbjct: 405 SSGGQHTVLL 414
Score = 127 (49.8 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 39/115 (33%), Positives = 57/115 (49%)
Query: 235 GHVHTCGSNTHGQLGHGDT-LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
G V T G GQLG G+ ++R P ++ E++ VQ AG + + ++ +G VYSF
Sbjct: 35 GVVLTLGQGDVGQLGLGENVMERKKPALVSIPEDI---VQAEAGGMHTVCLSKSGQVYSF 91
Query: 294 GSGSNFCLGHGE--QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSL 346
G LG + E+ P + + K V++VSAGD H AL G V L
Sbjct: 92 GCNDEGALGRDTSVEGSEMVPGKVD-LQEK---VIQVSAGDSHTAALTEDGRVFL 142
>UNIPROTKB|E1B827 [details] [associations]
symbol:NEK8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072372 "primary cilium" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0072372 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104137 OMA:EREVFAW EMBL:DAAA02048605
EMBL:DAAA02048606 IPI:IPI00700790 Ensembl:ENSBTAT00000020643
Uniprot:E1B827
Length = 698
Score = 174 (66.3 bits), Expect = 4.2e-10, P = 4.2e-10
Identities = 58/190 (30%), Positives = 85/190 (44%)
Query: 165 VVQVSASENHAAFVLQSGQVFTC------GDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
VVQV+A A V +SG++ + G + +P F R +E GV
Sbjct: 340 VVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGGALLPGAVEQQQPQFVSRFLEGQSGVTI 399
Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG 277
K V G FT LT RG + T GS ++G LGHG D P + L +G +VQ+A G
Sbjct: 400 KHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGGLNDISQPTIVEAL--LGYEMVQVACG 457
Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
S++LA++ ++++G G LG G + P+ + G RV G + V
Sbjct: 458 ASHVLALSTERELFAWGRGDGGRLGLGTRESHSCPQQVPM--PPGQEAQRVICGIDSSVI 515
Query: 338 LDSSGYVSLC 347
L G C
Sbjct: 516 LTVPGQALAC 525
Score = 168 (64.2 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 65/241 (26%), Positives = 97/241 (40%)
Query: 106 IVETSAGN--MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGP-ETTQCVSFTRINFPS 161
IVE G +Q+ G H L +S +F+ G G LG G E+ C ++ P
Sbjct: 442 IVEALLGYEMVQVACGASHVLALSTERELFAWGRGDGGRLGLGTRESHSCPQ--QVPMPP 499
Query: 162 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCG--HRDTNR-PIFRPRLVEALK---- 214
+V + + + GQ CG N G H P ++ EAL
Sbjct: 500 GQEAQRVICGIDSSVILTVPGQALACGSNRFNKLGLDHLSLGEEPALHQQVEEALNFTPL 559
Query: 215 -GVPCKQ-----VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 268
P Q V G + +T G +T GSN HGQLG P + L+ +
Sbjct: 560 GSAPLDQEPLLSVDLGTAHSAAVTASGDCYTFGSNQHGQLGTNARRVSRAPCQVQGLQGI 619
Query: 269 GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 328
+ +A G ++ +A+ G VYS+G G+ LG ++ D PR +Q + V V
Sbjct: 620 -KIAMVACGDAFTVAIGAEGEVYSWGKGARGRLGRRDE-DAALPRPVQLDETQPYTVTSV 677
Query: 329 S 329
S
Sbjct: 678 S 678
Score = 163 (62.4 bits), Expect = 7.2e-09, P = 7.2e-09
Identities = 67/268 (25%), Positives = 111/268 (41%)
Query: 93 VLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCV 152
V RFL+ + I + G++ + L + + GS G LGHG
Sbjct: 387 VSRFLEG-QSGVTIKHVACGDL------FTACLTDRGIIMTFGSGSNGCLGHGG-LNDIS 438
Query: 153 SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG--DNSSFCCGHRDTNRPIFRPRLV 210
T + +VQV+ +H + ++F G D G R+++ P+ V
Sbjct: 439 QPTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDGGRLGLGTRESHSC---PQQV 495
Query: 211 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG--HGDTLDRP----------- 257
G ++V G++ + LT+ G CGSN +LG H + P
Sbjct: 496 PMPPGQEAQRVICGIDSSVILTVPGQALACGSNRFNKLGLDHLSLGEEPALHQQVEEALN 555
Query: 258 -TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
TP APL++ ++ + G ++ AVT +G Y+FGS + LG + P +Q
Sbjct: 556 FTPLGSAPLDQE-PLLSVDLGTAHSAAVTASGDCYTFGSNQHGQLGTNARRVSRAPCQVQ 614
Query: 317 TFRRKGIHVVRVSAGDEHVVALDSSGYV 344
+ GI + V+ GD VA+ + G V
Sbjct: 615 GLQ--GIKIAMVACGDAFTVAIGAEGEV 640
>UNIPROTKB|E2QZC2 [details] [associations]
symbol:NEK8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
Ensembl:ENSCAFT00000029828 Uniprot:E2QZC2
Length = 701
Score = 173 (66.0 bits), Expect = 5.4e-10, P = 5.4e-10
Identities = 58/190 (30%), Positives = 85/190 (44%)
Query: 165 VVQVSASENHAAFVLQSGQVFTC------GDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
VVQV+A A V +SG++ + G + +P F R +E GV
Sbjct: 343 VVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGGALLPGAVEQQQPQFVSRFLEGQSGVTI 402
Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG 277
K V G FT LT RG + T GS ++G LGHG D P + L +G +VQ+A G
Sbjct: 403 KHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLNDISQPTIVEAL--LGYEMVQVACG 460
Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
S++LA++ ++++G G LG G + P+ Q G RV G + +
Sbjct: 461 ASHVLALSTERELFAWGRGDGGRLGLGTRESHSCPQ--QVSMPPGQEAQRVVCGIDSSMI 518
Query: 338 LDSSGYVSLC 347
L G C
Sbjct: 519 LTVPGRALAC 528
Score = 154 (59.3 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 61/228 (26%), Positives = 94/228 (41%)
Query: 106 IVETSAGN--MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGP-ETTQCVSFTRINFPS 161
IVE G +Q+ G H L +S +F+ G G LG G E+ C +++ P
Sbjct: 445 IVEALLGYEMVQVACGASHVLALSTERELFAWGRGDGGRLGLGTRESHSCPQ--QVSMPP 502
Query: 162 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCG-HRDT--NRPIFRPRLVEALKGVPC 218
+V + + + G+ CG N G R + P ++ EAL P
Sbjct: 503 GQEAQRVVCGIDSSMILTVPGRALACGSNRFNKLGLDRLSLGEEPAPNQQVEEALSFTPL 562
Query: 219 KQ----------VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 268
V G + +T G +T GSN HGQLG P + L+ +
Sbjct: 563 GSAPFDREPLLSVDLGTAHSAAVTASGDCYTFGSNQHGQLGTNARRVSRAPCQVQGLQNI 622
Query: 269 GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
+ +A G ++ +AV G VYS+G G+ LG ++ L PR +Q
Sbjct: 623 -KIAMVACGDAFTVAVGAEGEVYSWGKGARGRLGRRDEDAGL-PRPVQ 668
Score = 153 (58.9 bits), Expect = 9.3e-08, P = 9.3e-08
Identities = 66/268 (24%), Positives = 108/268 (40%)
Query: 93 VLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCV 152
V RFL+ + I + G++ + L + + GS G LGHG
Sbjct: 390 VSRFLEG-QSGVTIKHVACGDL------FTACLTDRGIIMTFGSGSNGCLGHG-SLNDIS 441
Query: 153 SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG--DNSSFCCGHRDTNRPIFRPRLV 210
T + +VQV+ +H + ++F G D G R+++ P+ V
Sbjct: 442 QPTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDGGRLGLGTRESHSC---PQQV 498
Query: 211 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTL---DRPTPK------- 260
G ++V G++ + LT+ G CGSN +LG D L + P P
Sbjct: 499 SMPPGQEAQRVVCGIDSSMILTVPGRALACGSNRFNKLGL-DRLSLGEEPAPNQQVEEAL 557
Query: 261 SIAPLEEVG----SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
S PL ++ + G ++ AVT +G Y+FGS + LG + P +Q
Sbjct: 558 SFTPLGSAPFDREPLLSVDLGTAHSAAVTASGDCYTFGSNQHGQLGTNARRVSRAPCQVQ 617
Query: 317 TFRRKGIHVVRVSAGDEHVVALDSSGYV 344
+ I + V+ GD VA+ + G V
Sbjct: 618 GLQN--IKIAMVACGDAFTVAVGAEGEV 643
>TAIR|locus:2076889 [details] [associations]
symbol:AT3G02510 "AT3G02510" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
[GO:0008536 "Ran GTPase binding" evidence=ISS] INTERPRO:IPR000408
Pfam:PF00415 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 UniGene:At.20016
UniGene:At.41128 EMBL:AK227929 IPI:IPI00539921 RefSeq:NP_186900.3
UniGene:At.70614 ProteinModelPortal:Q0WSJ9 SMR:Q0WSJ9 PRIDE:Q0WSJ9
EnsemblPlants:AT3G02510.1 GeneID:821100 KEGG:ath:AT3G02510
TAIR:At3g02510 OMA:NGGVQCW PhylomeDB:Q0WSJ9 Genevestigator:Q2V3Z2
Uniprot:Q0WSJ9
Length = 393
Score = 167 (63.8 bits), Expect = 8.9e-10, P = 8.9e-10
Identities = 68/239 (28%), Positives = 107/239 (44%)
Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTR--INFPSAAH----VVQ 167
Q G +H L + + ++ G + G G P + R I P V Q
Sbjct: 95 QAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPLKDEMGRPVRRDIVIPKRCAPKLTVRQ 154
Query: 168 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
V+A H+ + + G V+T G + G D + I P V+ L+ V V A N
Sbjct: 155 VAAGGTHSVVLTREGHVWTWGQ--PWPPG--DIKQ-ISVPVRVQGLENVRLIAVGAFHNL 209
Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
L G + G+N +GQLG GDT P + L+++ ++V IAAG + A+T
Sbjct: 210 A--LEEDGRLLAWGNNEYGQLGTGDTQPTSHPVPVQGLDDL-TLVDIAAGGWHSTALTDK 266
Query: 288 GVVYSFGSGSNFCLGHGE--QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
G VY +G G + LG G+ + ++ P+ + + I ++VS G H VAL G +
Sbjct: 267 GEVYGWGRGEHGRLGLGDNDKSSKMVPQKVNLLAEEDI--IQVSCGGTHSVALTRDGRI 323
Score = 153 (58.9 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 44/150 (29%), Positives = 76/150 (50%)
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
++ V A N A + + G++ G+N G DT +P P V+ L + + AG
Sbjct: 200 LIAVGAFHNLA--LEEDGRLLAWGNNEYGQLGTGDT-QPTSHPVPVQGLDDLTLVDIAAG 256
Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDT--LDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
+ LT +G V+ G HG+LG GD + P+ + L E ++Q++ G ++ +
Sbjct: 257 GWHSTALTDKGEVYGWGRGEHGRLGLGDNDKSSKMVPQKVNLLAEE-DIIQVSCGGTHSV 315
Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQP 312
A+T +G ++SFG G + LG+G + QP
Sbjct: 316 ALTRDGRIFSFGRGDHGRLGYGRKVTTGQP 345
Score = 153 (58.9 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 62/237 (26%), Positives = 101/237 (42%)
Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPET-TQCVSFTRINFPSAAHVVQVSASEN 173
+ +G ++L I + ++F+ G + G LGH PET T+ + +R+ + + Q +
Sbjct: 43 VVSGSRNSLAICDDGTMFTWGWNQRGTLGHQPETKTENIP-SRVKALANVKITQAAIGGW 101
Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHR----DTNRPIFRPRLV--EALKGVPCKQVTAGLNF 227
H V G+ + G N CG + RP+ R ++ + +QV AG
Sbjct: 102 HCLAVDDQGRAYAWGGNEYGQCGEEPLKDEMGRPVRRDIVIPKRCAPKLTVRQVAAGGTH 161
Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
+ LT GHV T G GD P + LE V IA G + LA+ +
Sbjct: 162 SVVLTREGHVWTWGQ----PWPPGDIKQISVPVRVQGLENVRL---IAVGAFHNLALEED 214
Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
G + ++G+ LG G+ P +Q + +V ++AG H AL G V
Sbjct: 215 GRLLAWGNNEYGQLGTGDTQPTSHPVPVQGL--DDLTLVDIAAGGWHSTALTDKGEV 269
Score = 128 (50.1 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 48/177 (27%), Positives = 77/177 (43%)
Query: 125 LISNSSVFSCGSSLCGVLGHGP-ETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 183
+++ +S+ + GS G LG G E + P + V VS S N A + G
Sbjct: 1 MVTATSIIAWGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSV-VSGSRNSLA-ICDDGT 58
Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
+FT G N GH+ + P V+AL V Q G + +G + G N
Sbjct: 59 MFTWGWNQRGTLGHQPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGGN 118
Query: 244 THGQLGHG---DTLDRPTPKSIAPLEEVG---SVVQIAAGPSYMLAVTGNGVVYSFG 294
+GQ G D + RP + I + +V Q+AAG ++ + +T G V+++G
Sbjct: 119 EYGQCGEEPLKDEMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVLTREGHVWTWG 175
>UNIPROTKB|F1RNC5 [details] [associations]
symbol:NEK8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA]
InterPro:IPR000719 InterPro:IPR002290 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 GeneTree:ENSGT00700000104137
EMBL:FP016171 Ensembl:ENSSSCT00000019338 OMA:EPASHQQ Uniprot:F1RNC5
Length = 700
Score = 171 (65.3 bits), Expect = 9.1e-10, P = 9.1e-10
Identities = 57/190 (30%), Positives = 85/190 (44%)
Query: 165 VVQVSASENHAAFVLQSGQVFTC------GDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
VVQV+A A V +SG++ + G + +P F R +E GV
Sbjct: 342 VVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGGALLPGAIEQPQPQFVSRFLEGQSGVTI 401
Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG 277
K V G FT LT RG + T GS ++G LGHG D P + L +G +VQ+A G
Sbjct: 402 KHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLNDISQPTIVEAL--LGYEMVQVACG 459
Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
S++LA++ ++++G G LG G + P+ + G RV G + +
Sbjct: 460 ASHVLALSTERELFAWGRGDGGRLGLGTRESHCCPQLVPM--PPGQEAQRVVCGIDSSMI 517
Query: 338 LDSSGYVSLC 347
L G C
Sbjct: 518 LTVPGQALAC 527
Score = 170 (64.9 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 69/269 (25%), Positives = 114/269 (42%)
Query: 93 VLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCV 152
V RFL+ + I + G++ + L + + GS G LGHG
Sbjct: 389 VSRFLEG-QSGVTIKHVACGDL------FTACLTDRGIIMTFGSGSNGCLGHG-SLNDIS 440
Query: 153 SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG--DNSSFCCGHRDTNRPIFRPRLV 210
T + +VQV+ +H + ++F G D G R+++ P+LV
Sbjct: 441 QPTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDGGRLGLGTRESH---CCPQLV 497
Query: 211 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTL---DRP---------- 257
G ++V G++ + LT+ G CGSN +LG D L + P
Sbjct: 498 PMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGL-DPLSLGEEPAPHQQVEEAV 556
Query: 258 --TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAI 315
TP APL++ ++ + GP++ L +T +G Y+FGS + LG + P +
Sbjct: 557 TFTPLGSAPLDQE-PLLSVDLGPAHSLLLTASGDCYTFGSNQHGQLGTNARRVSRAPCRV 615
Query: 316 QTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
Q + GI + V+ GD VA+ + G V
Sbjct: 616 QGLQ--GIKISTVACGDAFTVAIGAEGEV 642
Score = 153 (58.9 bits), Expect = 9.3e-08, P = 9.3e-08
Identities = 59/227 (25%), Positives = 89/227 (39%)
Query: 106 IVETSAGN--MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA 162
IVE G +Q+ G H L +S +F+ G G LG G + C + P
Sbjct: 444 IVEALLGYEMVQVACGASHVLALSTERELFAWGRGDGGRLGLGTRESHCCP-QLVPMPPG 502
Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCG------------HRDTNRPI-FRPRL 209
+V + + + GQ CG N G H+ + F P
Sbjct: 503 QEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLDPLSLGEEPAPHQQVEEAVTFTPLG 562
Query: 210 VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 269
L P V G + LT G +T GSN HGQLG P + L+ +
Sbjct: 563 SAPLDQEPLLSVDLGPAHSLLLTASGDCYTFGSNQHGQLGTNARRVSRAPCRVQGLQGI- 621
Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
+ +A G ++ +A+ G V+S+G G+ LG ++ L PR +Q
Sbjct: 622 KISTVACGDAFTVAIGAEGEVFSWGKGARGRLGRKDEDAGL-PRPVQ 667
Score = 145 (56.1 bits), Expect = 7.2e-07, P = 7.2e-07
Identities = 44/141 (31%), Positives = 73/141 (51%)
Query: 203 PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
P+ +V+ G K AG+ +G L I G+ G L G +++P P+ +
Sbjct: 336 PMLNTEVVQVAAGRTQK---AGVTRSGRL-ILWEAPPLGAGG-GALLPG-AIEQPQPQFV 389
Query: 263 AP-LE-EVGSVVQ-IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
+ LE + G ++ +A G + +T G++ +FGSGSN CLGHG +D QP ++
Sbjct: 390 SRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLNDISQPTIVEALL 449
Query: 320 RKGIHVVRVSAGDEHVVALDS 340
G +V+V+ G HV+AL +
Sbjct: 450 --GYEMVQVACGASHVLALST 468
>UNIPROTKB|F1Q1C6 [details] [associations]
symbol:WBSCR16 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104312 OMA:MVTLAKS EMBL:AAEX03004216
EMBL:AAEX03004217 Ensembl:ENSCAFT00000018027 Uniprot:F1Q1C6
Length = 465
Score = 166 (63.5 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 68/244 (27%), Positives = 108/244 (44%)
Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFT-RINFPSA--AHVVQVS 169
+Q++ GR H+L++++ VFS G++ G G + S + ++N VVQV
Sbjct: 178 LQVSCGRAHSLILTDCEGVFSMGNNAYGQCGRNVVENEIYSESHKVNRMQDFDGQVVQVV 237
Query: 170 ASENHAAFVLQSGQVFTCG--DNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLN 226
++H+ F+ G+V++CG + GH D T+ P +L L GV QV +
Sbjct: 238 CGQDHSLFLTDKGEVYSCGWGADGQTGLGHYDITSVPT---KLGGDLAGVNVVQVATYGD 294
Query: 227 FTGFLTIRGHVHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
++ G + G++ + QL D+ P+ + P VG V Q A G + +
Sbjct: 295 CCLAVSAEGGLFGWGNSEYLQLASVTDSTQVNVPRCL-PFSGVGKVKQAACGGTGCAVLN 353
Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQ------TFRRKGIHVVRVSAGDEHVVAL 338
G G V+ +G G LG G E P I T G+HV + G H AL
Sbjct: 354 GEGHVFVWGYG---ILGKGPNLVETAFPEVIPPTLFGLTEFNPGVHVSHIWCGLSHFAAL 410
Query: 339 DSSG 342
S G
Sbjct: 411 TSKG 414
Score = 148 (57.2 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 54/191 (28%), Positives = 83/191 (43%)
Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPC 218
P V+QVS H+ + VF+ G+N+ CG I+ V ++
Sbjct: 172 PQETRVLQVSCGRAHSLILTDCEGVFSMGNNAYGQCGRNVVENEIYSESHKVNRMQDFDG 231
Query: 219 K--QVTAGLNFTGFLTIRGHVHTCGSNTHGQ--LGHGDTLDRPTPKSIAPLEEVGSVVQI 274
+ QV G + + FLT +G V++CG GQ LGH D PT K L V +VVQ+
Sbjct: 232 QVVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGLGHYDITSVPT-KLGGDLAGV-NVVQV 289
Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDE 333
A LAV+ G ++ +G+ L ++ PR + F G V + + G
Sbjct: 290 ATYGDCCLAVSAEGGLFGWGNSEYLQLASVTDSTQVNVPRCLP-FSGVG-KVKQAACGGT 347
Query: 334 HVVALDSSGYV 344
L+ G+V
Sbjct: 348 GCAVLNGEGHV 358
Score = 140 (54.3 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 68/257 (26%), Positives = 106/257 (41%)
Query: 97 LQSVEHSSDIVETSAGNM-QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSF 154
+ S H + ++ G + Q+ G+ H+L +++ V+SCG G G G V
Sbjct: 216 IYSESHKVNRMQDFDGQVVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGLGHYDITSVP- 274
Query: 155 TRINFPSAA-HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
T++ A +VVQV+ + V G +F G++ + + PR +
Sbjct: 275 TKLGGDLAGVNVVQVATYGDCCLAVSAEGGLFGWGNSEYLQLASVTDSTQVNVPRCLP-F 333
Query: 214 KGV-PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAP----LEE 267
GV KQ G L GHV G +G LG G L + P+ I P L E
Sbjct: 334 SGVGKVKQAACGGTGCAVLNGEGHVFVWG---YGILGKGPNLVETAFPEVIPPTLFGLTE 390
Query: 268 VGSVVQIA---AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
V ++ G S+ A+T G ++ +G CLG G D+ P + G
Sbjct: 391 FNPGVHVSHIWCGLSHFAALTSKGELFVWGKNIRGCLGIGRLEDQYFPWRVTM---PG-E 446
Query: 325 VVRVSAGDEHVVALDSS 341
V V+ G +H+V L S
Sbjct: 447 PVDVACGVDHMVTLAKS 463
>POMBASE|SPBC557.03c [details] [associations]
symbol:pim1 "Ran GDP/GTP exchange factor" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005087 "Ran guanyl-nucleotide exchange factor
activity" evidence=IGI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006406 "mRNA export from nucleus" evidence=IMP] [GO:0006407
"rRNA export from nucleus" evidence=ISO] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IMP] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IC] [GO:0007346 "regulation of
mitotic cell cycle" evidence=IMP] [GO:0030071 "regulation of
mitotic metaphase/anaphase transition" evidence=IMP] [GO:0031291
"Ran protein signal transduction" evidence=IGI] [GO:0032888
"regulation of mitotic spindle elongation" evidence=IMP]
[GO:0042992 "negative regulation of transcription factor import
into nucleus" evidence=IMP] [GO:0060623 "regulation of chromosome
condensation" evidence=IGI] [GO:1901673 "regulation of spindle
assembly involved in mitosis" evidence=IMP] PomBase:SPBC557.03c
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0051301 GO:GO:0030071
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0000790
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0006406
GO:GO:0090307 GO:GO:0005087 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0007093 eggNOG:COG5184
GO:GO:0060623 GO:GO:0042992 GO:GO:0006407 GO:GO:0031291 EMBL:M73528
PIR:B40039 PIR:T50368 RefSeq:NP_596026.1 ProteinModelPortal:P28745
STRING:P28745 EnsemblFungi:SPBC557.03c.1 GeneID:2541059
KEGG:spo:SPBC557.03c HOGENOM:HOG000170207 OMA:KGIVYAW
OrthoDB:EOG466ZVF NextBio:20802173 Uniprot:P28745
Length = 539
Score = 166 (63.5 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 67/234 (28%), Positives = 100/234 (42%)
Query: 130 SVFSCGSSLCGVLGHGPETTQCVSFTRIN---FPSAAHVVQVSASENHAAFVLQSGQVFT 186
+V+ GS LG G E V R+N VV ++ H+A + G+V+T
Sbjct: 72 NVYVFGSGSMNELGMGEEEMDVVYRPRLNPILSTDKVGVVDLAVGGMHSAALSHDGRVYT 131
Query: 187 CGDNSSFCCGH-----RDTN-----RPIFR--PRLVE-ALKGVPCKQVTAGLNFTGFLTI 233
G N + G +D N + P VE AL + +V N T +T
Sbjct: 132 WGVNDDYALGRLTKDQKDENGDKVDNDLLEGTPSKVEGALSHLRVTKVICSDNLTAAITD 191
Query: 234 RGHVHTCGSN--THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
G T G+ + G LG+ D+ R + L E+ Q+A G +++A+T G VY
Sbjct: 192 NGCCFTWGTFRCSDGVLGYSDSQKRTAEPTQMRLPEI---CQLATGTDHIIALTTTGKVY 248
Query: 292 SFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
++G+G F LG + LQ Q K I + V AG H A+D+ G V
Sbjct: 249 TWGNGQQFQLGRRMLERRRLQGLTPQPLALKNI--ISVGAGSYHSFAIDNKGRV 300
Score = 164 (62.8 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 64/232 (27%), Positives = 103/232 (44%)
Query: 115 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGP-ETTQCVSFTRINFPSAAHVVQVSASE 172
Q+ TG H + L + V++ G+ LG E + T + +++ V A
Sbjct: 230 QLATGTDHIIALTTTGKVYTWGNGQQFQLGRRMLERRRLQGLTPQPL-ALKNIISVGAGS 288
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCG----HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
H+ + G+V+ G N + CG + I +P LV+AL+G K +T G + T
Sbjct: 289 YHSFAIDNKGRVYAWGLNITRQCGIEVEDEEEGAVITKPTLVDALEGYNVKSITGGEHHT 348
Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDT-LDRPTPKS--------IAP--LEEVGSVVQIAAG 277
L G V G + QLG D L K P + + +V+Q+ G
Sbjct: 349 LALLEDGRVLAWGRDDRHQLGIPDNALPETVVKDEKGNNYYLSTPTIIPGLTNVIQVVCG 408
Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF-RRKGIHVVRV 328
+ LAVT +G VYS+GS N+ +G G+ +++ A+ T R K I V +
Sbjct: 409 THHNLAVTSDGKVYSWGSAENYEVGQGDNDEDV---AVPTLVRSKAIKEVAI 457
>UNIPROTKB|Q7ZZC8 [details] [associations]
symbol:nek9 "Serine/threonine-protein kinase Nek9"
species:8355 "Xenopus laevis" [GO:0019901 "protein kinase binding"
evidence=ISS] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005524 GO:GO:0005737 GO:GO:0019901
GO:GO:0051301 GO:GO:0007067 GO:GO:0046872 SUPFAM:SSF56112
GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
HOVERGEN:HBG039572 EMBL:AY271412 UniGene:Xl.77246
ProteinModelPortal:Q7ZZC8 Xenbase:XB-GENE-974105 Uniprot:Q7ZZC8
Length = 944
Score = 169 (64.5 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 74/276 (26%), Positives = 125/276 (45%)
Query: 81 ELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCG 140
E+L R +W+R + +E ++ S N + TG T+ + +V + SS
Sbjct: 283 EILERPILSWRR-----RDMEEKVSMLNRS--NKKPRTG---TVTEAPIAVVTSRSSEVY 332
Query: 141 VLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC-----GDNSSFCC 195
V G G T Q + F QV A + H A V +++T G
Sbjct: 333 VWGGGKTTPQKLDV----FKGGWRARQVCAGDAHFAVVTVEKELYTWVNMQGGSKLHGQL 388
Query: 196 GHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTL 254
GH D R +R P+ VE L+G ++V+ G +FT +T G +++ GS+ +G LG +
Sbjct: 389 GHGD--RASYRQPKHVEKLQGKSVQKVSCGSDFTVCITDEGQLYSFGSDYYGCLGVNQSA 446
Query: 255 DRPTPKSIAP---LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ 311
+ + L E V Q++ G S+++A+T + VYS+G G LG + D
Sbjct: 447 GSEVLEPLLVDFFLNE--PVDQVSCGDSHIMALTRSKSVYSWGCGEYGRLGLDSEDDVYS 504
Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSLC 347
P+ ++ ++G+ +V V G + L +G V C
Sbjct: 505 PQKVEV--QRGLCIVNVCCGSDGSFLLTLTGKVLAC 538
Score = 152 (58.6 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 59/244 (24%), Positives = 106/244 (43%)
Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPET-TQCVSFTRINFPSAAHVVQVSASE 172
+++ G T+ I++ ++S GS G LG ++ + ++F V QVS +
Sbjct: 412 KVSCGSDFTVCITDEGQLYSFGSDYYGCLGVNQSAGSEVLEPLLVDFFLNEPVDQVSCGD 471
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
+H + +S V++ G G D+ ++ P+ VE +G+ V G + + LT
Sbjct: 472 SHIMALTRSKSVYSWGCGEYGRLG-LDSEDDVYSPQKVEVQRGLCIVNVCCGSDGSFLLT 530
Query: 233 IRGHVHTCGSNTHGQLG----------HGDTLDRPTPKSIAPLEEVG--SVVQIAAGPSY 280
+ G V CG N H +LG H + P S+ +++ + I+ G ++
Sbjct: 531 LTGKVLACGLNEHNKLGLNQYTAGIINHEAFQEVPYTTSLTLAKQLSFYKIRSISPGRTH 590
Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
A+ G + +FGS LG G+ L + G V+RVS GDE A +
Sbjct: 591 TAAIDERGRLLTFGSNKCGQLGVGDYRKHLGINLLGG-PLGGKQVIRVSCGDEFTTAATA 649
Query: 341 SGYV 344
++
Sbjct: 650 DNHI 653
Score = 120 (47.3 bits), Expect = 0.00061, P = 0.00061
Identities = 50/198 (25%), Positives = 85/198 (42%)
Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
Q++ G H + ++ S SV+S G G LG E S ++ +V V +
Sbjct: 466 QVSCGDSHIMALTRSKSVYSWGCGEYGRLGLDSED-DVYSPQKVEVQRGLCIVNVCCGSD 524
Query: 174 HAAFVLQSGQVFTCGDNSSFCCG-HRDT----NRPIFR--P-----RLVEALKGVPCKQV 221
+ + +G+V CG N G ++ T N F+ P L + L + +
Sbjct: 525 GSFLLTLTGKVLACGLNEHNKLGLNQYTAGIINHEAFQEVPYTTSLTLAKQLSFYKIRSI 584
Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSY 280
+ G T + RG + T GSN GQLG GD + PL V++++ G +
Sbjct: 585 SPGRTHTAAIDERGRLLTFGSNKCGQLGVGDYRKHLGINLLGGPLGGK-QVIRVSCGDEF 643
Query: 281 MLAVTGNGVVYSFGSGSN 298
A T + ++++G+G N
Sbjct: 644 TTAATADNHIFAWGNGGN 661
>UNIPROTKB|E9PS70 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
PANTHER:PTHR22870:SF7 HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058
EMBL:AC124078 IPI:IPI00985461 ProteinModelPortal:E9PS70 SMR:E9PS70
Ensembl:ENST00000532389 ArrayExpress:E9PS70 Bgee:E9PS70
Uniprot:E9PS70
Length = 137
Score = 143 (55.4 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 48/136 (35%), Positives = 60/136 (44%)
Query: 124 LLISNSSVFSCGSSLCGVLG--HGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQS 181
+L N V SCGS+ G LG HGP +CV I VV ++A HA S
Sbjct: 1 MLTENGQVLSCGSNSFGQLGVPHGPR--RCVVPQAIELHKEK-VVCIAAGLRHAVAATAS 57
Query: 182 GQVFTCGDNSSFCCGHR---DTNRPIF----RPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
G VF G + CG R P+F P V L+ V AG + + LT
Sbjct: 58 GIVFQWGTGLA-SCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDA 116
Query: 235 GHVHTCGSNTHGQLGH 250
G V+ GSN HGQL +
Sbjct: 117 GEVYVWGSNKHGQLAN 132
Score = 115 (45.5 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 42/122 (34%), Positives = 61/122 (50%)
Query: 231 LTIRGHVHTCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
LT G V +CGSN+ GQLG HG P++I +E VV IAAG + +A T +G
Sbjct: 2 LTENGQVLSCGSNSFGQLGVPHGPRRC-VVPQAIELHKE--KVVCIAAGLRHAVAATASG 58
Query: 289 VVYSFGSGSNFCLGHGEQHDELQP---RAIQTFRRKGIH---VVRVSAGDEHVVALDSSG 342
+V+ +G+G C G + P A + R G+ + V AG +H +L +G
Sbjct: 59 IVFQWGTGLASC-GRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAG 117
Query: 343 YV 344
V
Sbjct: 118 EV 119
>RGD|1311697 [details] [associations]
symbol:Ibtk "inhibitor of Bruton agammaglobulinemia tyrosine
kinase" species:10116 "Rattus norvegicus" [GO:0001933 "negative
regulation of protein phosphorylation" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0019901 "protein kinase binding" evidence=ISO] [GO:0030292
"protein tyrosine kinase inhibitor activity" evidence=ISO]
[GO:0051209 "release of sequestered calcium ion into cytosol"
evidence=ISO] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088 PROSITE:PS50097
SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005737 GO:GO:0051209 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 GO:GO:0030292 OrthoDB:EOG4J6RQ1
GeneTree:ENSGT00700000104160 IPI:IPI00370548
Ensembl:ENSRNOT00000056930 ArrayExpress:D3ZH46 Uniprot:D3ZH46
Length = 1352
Score = 170 (64.9 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 45/122 (36%), Positives = 61/122 (50%)
Query: 129 SSVFSCGSSLCGVLGHGPETTQC-VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
+ V++ G + LGHG + ++ + S +V QV + H+ F+ Q GQV+TC
Sbjct: 142 TEVYTWGDNTNFTLGHGSQNSKHHPELLDLFSRSRVYVKQVVLCKFHSVFLSQQGQVYTC 201
Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
G GH D + PRLVE L G C QV A + T LT G V+T G NT Q
Sbjct: 202 GHGRGGRLGHGDEQTCLV-PRLVEGLSGHSCSQVAAAKDHTVVLTEDGCVYTFGLNTFHQ 260
Query: 248 LG 249
LG
Sbjct: 261 LG 262
Score = 162 (62.1 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 48/147 (32%), Positives = 70/147 (47%)
Query: 183 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG--VPCKQVTAGLNFTGFLTIRGHVHTC 240
+V+T GDN++F GH N P L++ V KQV + FL+ +G V+TC
Sbjct: 143 EVYTWGDNTNFTLGHGSQNSK-HHPELLDLFSRSRVYVKQVVLCKFHSVFLSQQGQVYTC 201
Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
G G+LGHGD P+ + L S Q+AA + + +T +G VY+FG +
Sbjct: 202 GHGRGGRLGHGDEQTCLVPRLVEGLSG-HSCSQVAAAKDHTVVLTEDGCVYTFGLNTFHQ 260
Query: 301 LGHGEQHDELQ-PRAIQTFRRKGIHVV 326
LG PR + +KG H V
Sbjct: 261 LGIIPPPSSCNVPRQLTVRMKKG-HTV 286
>ZFIN|ZDB-GENE-061220-11 [details] [associations]
symbol:sergef "secretion regulating guanine
nucleotide exchange factor" species:7955 "Danio rerio" [GO:0050709
"negative regulation of protein secretion" evidence=IEA]
InterPro:IPR027048 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-061220-11 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 HOGENOM:HOG000154414 HOVERGEN:HBG051746
OrthoDB:EOG4J1183 PANTHER:PTHR22870:SF7 EMBL:BC124691
IPI:IPI00490832 UniGene:Dr.91496 InParanoid:Q08BJ6 Uniprot:Q08BJ6
Length = 423
Score = 163 (62.4 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 51/163 (31%), Positives = 81/163 (49%)
Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
++T G NS G + PR VE+ L+ + VT G + ++ G + CG
Sbjct: 39 LYTWGANSYGQLGQGNAEDQA-EPRRVESGLQEEQIRAVTGGGGHSALISDSGELLVCGQ 97
Query: 243 NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
N GQLG G TL+ T ++ PL G V Q++ G + + +TG+G+V + GS + LG
Sbjct: 98 NHKGQLGLGHTLEIMTFQT-CPLPGFGRVQQVSCGWDFTIILTGDGLVLACGSNAFGQLG 156
Query: 303 -HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
E+ +P +++F V V+AG H +A +SG V
Sbjct: 157 VSAEKTHSAEPLLLKSFHEP---VTSVAAGLRHALASTASGCV 196
Score = 145 (56.1 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 62/239 (25%), Positives = 106/239 (44%)
Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASE 172
Q++ G T++++ V +CGS+ G LG E T + +F V V+A
Sbjct: 127 QVSCGWDFTIILTGDGLVLACGSNAFGQLGVSAEKTHSAEPLLLKSFHEP--VTSVAAGL 184
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPI------FRPRLVEALKGVPCKQVTAGLN 226
HA SG V+ G S +P+ P LV V ++V AG
Sbjct: 185 RHALASTASGCVYQWGTGLSSHAKRMLNPQPVPSHLSSKEPCLVPGFAHVTTQKVIAGSA 244
Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI--APLEEVGSVVQIAAGPSYMLAV 284
LT+ G + GSN HGQL G +L P P ++ + L++ V + +G ++++A
Sbjct: 245 HCACLTVNGELFLWGSNKHGQLISG-SLFLPLPVALDRSMLQDE-RVSDVHSGWTHLVAQ 302
Query: 285 TGNGVVYSFGSGSNFCLG---HGEQHDELQPRAIQT-FRRKGIH-VVRVSAGDEHVVAL 338
T +G V+++G + LG H + +++ K + ++S G EH +A+
Sbjct: 303 TESGRVFTWGRSNYGQLGQTNHSMEKQSCDEHLVRSPVEVKALFGATQISCGSEHNLAV 361
Score = 142 (55.0 bits), Expect = 7.1e-07, P = 7.1e-07
Identities = 64/239 (26%), Positives = 98/239 (41%)
Query: 116 ITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
+T G H+ LIS+S + CG + G LG G T + ++F P V QVS +
Sbjct: 76 VTGGGGHSALISDSGELLVCGQNHKGQLGLG-HTLEIMTFQTCPLPGFGRVQQVSCGWDF 134
Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
+ G V CG N+ G P L+++ P V AGL T
Sbjct: 135 TIILTGDGLVLACGSNAFGQLGVSAEKTHSAEPLLLKSFHE-PVTSVAAGLRHALASTAS 193
Query: 235 GHVHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEV---G----SVVQIAAGPSYMLAVT 285
G V+ G+ G H + +P P ++ E G + ++ AG ++ +T
Sbjct: 194 GCVYQWGT---GLSSHAKRMLNPQPVPSHLSSKEPCLVPGFAHVTTQKVIAGSAHCACLT 250
Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
NG ++ +GS + L G L P A+ + V V +G H+VA SG V
Sbjct: 251 VNGELFLWGSNKHGQLISGSLFLPL-PVALDRSMLQDERVSDVHSGWTHLVAQTESGRV 308
Score = 124 (48.7 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 63/240 (26%), Positives = 94/240 (39%)
Query: 116 ITTGRYHTLLISNSS-VFSCGSSLCG----VLGHGPETTQCVSFTRINFPSAAHVV--QV 168
+ G H L + S V+ G+ L +L P + S P AHV +V
Sbjct: 180 VAAGLRHALASTASGCVYQWGTGLSSHAKRMLNPQPVPSHLSSKEPCLVPGFAHVTTQKV 239
Query: 169 SASENHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
A H A + +G++F G N G P+ R + L+ V +G
Sbjct: 240 IAGSAHCACLTVNGELFLWGSNKHGQLISGSLFLPLPVALDRSM--LQDERVSDVHSGWT 297
Query: 227 FTGFLTIRGHVHTCGSNTHGQLG---HG---DTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
T G V T G + +GQLG H + D +S ++ + QI+ G +
Sbjct: 298 HLVAQTESGRVFTWGRSNYGQLGQTNHSMEKQSCDEHLVRSPVEVKALFGATQISCGSEH 357
Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
LAV G G V+S+G + G G D QP+ I ++ AG H +AL S
Sbjct: 358 NLAVVG-GRVFSWGWNEHGMCGDGSLQDITQPQPIPALADAVALLIGCGAG--HSMALCS 414
>UNIPROTKB|F1NXI5 [details] [associations]
symbol:SERGEF "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IEA] [GO:0050709 "negative regulation of
protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005730 GO:GO:0045111
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0050709
GeneTree:ENSGT00700000104160 PANTHER:PTHR22870:SF7
EMBL:AADN02030419 EMBL:AADN02030421 EMBL:AADN02030420
IPI:IPI00682810 Ensembl:ENSGALT00000010072 OMA:PIELDIT
Uniprot:F1NXI5
Length = 382
Score = 162 (62.1 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 45/134 (33%), Positives = 68/134 (50%)
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
+ ++ H+A + +G++F CG N + G T + L AL G ++V G
Sbjct: 32 IKSIAGGGGHSAVITGAGELFVCGHNKAGQLGLNHTE-DVLCFTLCTALSGFCVQEVACG 90
Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT--PKSIAPLEEVGSVVQIAAGPSYML 282
+FT L G V +CGSN GQLG + P P+ I L+E V IAAG + L
Sbjct: 91 WDFTIILGRAGLVLSCGSNAFGQLGVPQ-ISGPCLIPQKIKSLKE--KAVGIAAGLRHAL 147
Query: 283 AVTGNGVVYSFGSG 296
A T +G+V+ +G+G
Sbjct: 148 AATESGLVFQWGTG 161
Score = 134 (52.2 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 65/249 (26%), Positives = 105/249 (42%)
Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
++ G T+++ + V SCGS+ G LG + C+ +I V ++A
Sbjct: 86 EVACGWDFTIILGRAGLVLSCGSNAFGQLGVPQISGPCLIPQKIK-SLKEKAVGIAAGLR 144
Query: 174 HAAFVLQSGQVFTCGDNSSFCCG--HRDTNRPIF----RPRLVEALKGVPCKQVTAGLNF 227
HA +SG VF G + H+ P+F P ++ GV QV+
Sbjct: 145 HALAATESGLVFQWGTGMASRAKRVHQGKTLPVFWAAKEPCEIKGNPGVLLCQVSLSAYL 204
Query: 228 TGFLTI-RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL----EEVGSVVQIAAGPSYML 282
T T GH++ GSN HGQL + PK I E++G+V +G ++++
Sbjct: 205 TSLSTAGEGHLYVWGSNKHGQLVSKEVF-LVEPKKIDTQFFSHEKIGAVW---SGWTHLV 260
Query: 283 AVTGNGVVYSFGSGSNFCLG-HGEQH--------DELQPRAIQTFRRK-GIHVV---RVS 329
A T G V+++G LG H + D P Q K G H + +++
Sbjct: 261 AQTETGKVFTWGRADYGQLGRHAAVYVADRVIKLDSFLPCCPQPEAEKNGNHTILLFQIA 320
Query: 330 AGDEHVVAL 338
G EH +A+
Sbjct: 321 CGSEHNLAV 329
>WB|WBGene00012370 [details] [associations]
symbol:W09G3.7 species:6239 "Caenorhabditis elegans"
[GO:0045132 "meiotic chromosome segregation" evidence=IMP]
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0045132 PRINTS:PR00633
PROSITE:PS50012 EMBL:AL032625 GeneTree:ENSGT00700000104312
EMBL:Z82080 EMBL:AL023854 RefSeq:NP_001021671.2
ProteinModelPortal:G5EEZ1 SMR:G5EEZ1 PRIDE:G5EEZ1
EnsemblMetazoa:W09G3.7a GeneID:173245 KEGG:cel:CELE_W09G3.7
CTD:173245 WormBase:W09G3.7a OMA:RKKVDCA NextBio:878861
Uniprot:G5EEZ1
Length = 404
Score = 162 (62.1 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 58/238 (24%), Positives = 109/238 (45%)
Query: 114 MQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR------INFPSAAHVVQ 167
++I++GR H+L+ +N VF+ G + G G PE V + ++FP++ ++
Sbjct: 125 LEISSGRAHSLIRTNLGVFAIGDNNFGQCGRNPENMDYVVGSEESPLLPLSFPTSEPIIS 184
Query: 168 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLN 226
+ S + + V SG VF+ G N CG+ + P V ++G ++V+ +
Sbjct: 185 IHCSMDTSFVVDSSGAVFSFGLNEDGQCGNEAYGIQ-WEPAKVRGDVEGSKIQKVSGSTD 243
Query: 227 FTGFLTIRGHVHTCGSNTHGQL-GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
+ G + G +GQ G D + T + +A +G ++ + + S ++A
Sbjct: 244 TLLACSENGEIFIWGQTEYGQAAGATDEIQLNTSRHVA--NSLGPIICVDSTQSSVVARN 301
Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
G V+ +G G LG G + + L+ P + G V VSAG+ + A++ G
Sbjct: 302 SRGNVFVWGVG---VLGMGPEAESLKTPTQMDQPLFDGKMVTSVSAGNSCMSAINEDG 356
>DICTYBASE|DDB_G0278255 [details] [associations]
symbol:DDB_G0278255 "regulator of chromosome
condensation (RCC1) domain-containing protein" species:44689
"Dictyostelium discoideum" [GO:0044351 "macropinocytosis"
evidence=RCA] dictyBase:DDB_G0278255 INTERPRO:IPR000408
Pfam:PF00415 EMBL:AAFI02000023 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 RefSeq:XP_642243.1
ProteinModelPortal:Q54YF9 PRIDE:Q54YF9 EnsemblProtists:DDB0235387
GeneID:8621452 KEGG:ddi:DDB_G0278255 InParanoid:Q54YF9 OMA:DIACGGY
Uniprot:Q54YF9
Length = 514
Score = 161 (61.7 bits), Expect = 7.3e-09, P = 7.3e-09
Identities = 55/201 (27%), Positives = 95/201 (47%)
Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETT---------QCVSFTRINFPSAAH 164
+I +G H LL+ N S++S G+ G LGHG + + +FT N + +
Sbjct: 249 KICSGSDHNLLLGNDGSLYSWGNGYFGALGHGVGSNDKENIYTPKKITTFTLNN--NESR 306
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH--RDT-NRPIFRPRLVEAL----KGVP 217
+V ++ H+ F+ +++T G GH DT N I P+ +++ G
Sbjct: 307 IVDIACGGYHSMFLTNDNEIYTFGYGEFGQLGHGENDTLNHYI--PKRIKSTGDNAAGNK 364
Query: 218 CKQVTAGLNFTGF-LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
K + AG + F +T G V++ G N G LGHG + +PK I + + ++ +I +
Sbjct: 365 IKSIFAGDHANSFYITTDGSVYSWGWNDGGSLGHGTNENHYSPKKI---QSLSNIKKITS 421
Query: 277 GPSYMLAVTGNGVVYSFGSGS 297
G + LA + N +Y FG +
Sbjct: 422 GFKHTLAQSINNDIYVFGDNT 442
Score = 139 (54.0 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 46/184 (25%), Positives = 84/184 (45%)
Query: 167 QVSASENHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEA--LKGVPCK-- 219
++ + +H + G +++ G+ GH + I+ P+ + L +
Sbjct: 249 KICSGSDHNLLLGNDGSLYSWGNGYFGALGHGVGSNDKENIYTPKKITTFTLNNNESRIV 308
Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG--DTLDRPTPKSIAPLEE--VGSVVQ-I 274
+ G + FLT ++T G GQLGHG DTL+ PK I + G+ ++ I
Sbjct: 309 DIACGGYHSMFLTNDNEIYTFGYGEFGQLGHGENDTLNHYIPKRIKSTGDNAAGNKIKSI 368
Query: 275 AAGP-SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
AG + +T +G VYS+G LGHG + P+ IQ+ ++ ++++G +
Sbjct: 369 FAGDHANSFYITTDGSVYSWGWNDGGSLGHGTNENHYSPKKIQSLS----NIKKITSGFK 424
Query: 334 HVVA 337
H +A
Sbjct: 425 HTLA 428
Score = 129 (50.5 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 37/143 (25%), Positives = 70/143 (48%)
Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETT------QCVSFTRINFPSAAHVV 166
+ I G YH++ ++N + +++ G G LGHG T + + T N +A + +
Sbjct: 308 VDIACGGYHSMFLTNDNEIYTFGYGEFGQLGHGENDTLNHYIPKRIKSTGDN--AAGNKI 365
Query: 167 QVSASENHAA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
+ + +HA ++ G V++ G N GH TN + P+ +++L + K++T+G
Sbjct: 366 KSIFAGDHANSFYITTDGSVYSWGWNDGGSLGH-GTNENHYSPKKIQSLSNI--KKITSG 422
Query: 225 LNFTGFLTIRGHVHTCGSNTHGQ 247
T +I ++ G NT GQ
Sbjct: 423 FKHTLAQSINNDIYVFGDNTFGQ 445
Score = 38 (18.4 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 128 NSSVFSCGSSLCGVLGHG 145
++ ++S G S GVLG G
Sbjct: 135 DNQLYSIGKSKYGVLGIG 152
>ZFIN|ZDB-GENE-040426-2216 [details] [associations]
symbol:rcc1 "regulator of chromosome condensation
1" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-040426-2216
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GeneTree:ENSGT00700000104160 KO:K11493 CTD:1104
HOGENOM:HOG000234341 HOVERGEN:HBG017712 OrthoDB:EOG4320Z9
HSSP:P18754 OMA:GTESCFV EMBL:CR855299 EMBL:BC059796 EMBL:BC066721
IPI:IPI00511389 RefSeq:NP_998343.1 UniGene:Dr.77012 SMR:Q6NY65
STRING:Q6NY65 Ensembl:ENSDART00000054026 GeneID:406457
KEGG:dre:406457 InParanoid:Q6NY65 NextBio:20818049 Uniprot:Q6NY65
Length = 418
Score = 159 (61.0 bits), Expect = 8.4e-09, P = 8.4e-09
Identities = 48/163 (29%), Positives = 77/163 (47%)
Query: 178 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV--TAGLNFTGFLTIRG 235
V + G V+ G ++ G + TN F P + + K V + G + T L G
Sbjct: 252 VSKEGHVYGFGLSNYHQLGTQSTNT-CFVPVKLSSFKNSTTSWVGFSGGQHHTLCLNSEG 310
Query: 236 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
++ G +G+LG G + + ++ P + V +A G S AVT G V+S+G
Sbjct: 311 KAYSLGRAEYGRLGLGKDVGEKSEPTVVP--GISDVQVVACGASVSYAVTKQGSVFSWGM 368
Query: 296 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
G+N LG GE+ DE P + + + V+ VS+G +H V L
Sbjct: 369 GTNLQLGTGEEEDEWSPVEMTGKQLENRVVLSVSSGGQHTVLL 411
Score = 156 (60.0 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 67/254 (26%), Positives = 109/254 (42%)
Query: 106 IVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFT-RINFPSAA 163
+V G +Q G HT+ +S++ +V++ G + G LG +T++ S T
Sbjct: 62 LVTLPEGIVQAVAGGMHTVCLSDTGNVYTFGCNDEGALGR--DTSEEGSETVPAKVDLGE 119
Query: 164 HVVQVSASENHAAFVLQSGQVFTCG---DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
++QVSA ++H+A + + G V+ G DN+ G + + P V K P +
Sbjct: 120 KIIQVSAGDSHSAALTEDGGVYVWGSFRDNNGVI-GLLEPMKKCTVPVKVPIDK--PVVK 176
Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGH--GDTLDRPTPKSIAPLEEV--------GS 270
+ +G + LT G ++T G GQLG +R K + L E G
Sbjct: 177 IVSGNDHLVMLTAHGELYTSGCGEQGQLGRVAEHFANRGGRKGLMRLLEPQMVIIKPRGK 236
Query: 271 VV--QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 328
VV + G + AV+ G VY FG + LG + P + +F+ V
Sbjct: 237 VVFTDVFCGAYFTFAVSKEGHVYGFGLSNYHQLGTQSTNTCFVPVKLSSFKNSTTSWVGF 296
Query: 329 SAGDEHVVALDSSG 342
S G H + L+S G
Sbjct: 297 SGGQHHTLCLNSEG 310
Score = 127 (49.8 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 38/114 (33%), Positives = 54/114 (47%)
Query: 234 RGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
+G V G GQLG G D ++R P ++ L E +VQ AG + + ++ G VY+
Sbjct: 34 KGLVLVLGQGDVGQLGLGEDVMERKKP-ALVTLPE--GIVQAVAGGMHTVCLSDTGNVYT 90
Query: 293 FGSGSNFCLGH--GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
FG LG E+ E P + G +++VSAGD H AL G V
Sbjct: 91 FGCNDEGALGRDTSEEGSETVPAKVDL----GEKIIQVSAGDSHSAALTEDGGV 140
>UNIPROTKB|F1MDF3 [details] [associations]
symbol:ALS2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051036 "regulation of endosome size" evidence=IEA]
[GO:0048812 "neuron projection morphogenesis" evidence=IEA]
[GO:0043539 "protein serine/threonine kinase activator activity"
evidence=IEA] [GO:0043234 "protein complex" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=IEA] [GO:0032313 "regulation of Rab GTPase activity"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0030676 "Rac
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0030027 "lamellipodium" evidence=IEA] [GO:0017137 "Rab GTPase
binding" evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange
factor activity" evidence=IEA] [GO:0016197 "endosomal transport"
evidence=IEA] [GO:0016050 "vesicle organization" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0008104
"protein localization" evidence=IEA] [GO:0007626 "locomotory
behavior" evidence=IEA] [GO:0007528 "neuromuscular junction
development" evidence=IEA] [GO:0006979 "response to oxidative
stress" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005769 "early endosome"
evidence=IEA] [GO:0001881 "receptor recycling" evidence=IEA]
[GO:0001726 "ruffle" evidence=IEA] [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0005543 "phospholipid binding"
evidence=IEA] InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621
PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415
Pfam:PF02204 GO:GO:0005829 GO:GO:0005813 GO:GO:0043234
GO:GO:0014069 GO:GO:0008104 GO:GO:0006979 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0007528 GO:GO:0048812
GO:GO:0007626 GO:GO:0035249 GO:GO:0043539 GO:GO:0016197
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 InterPro:IPR003409
InterPro:IPR003123 Pfam:PF02493 SMART:SM00698 PROSITE:PS51205
GeneTree:ENSGT00600000084242 OMA:AKPAIDF GO:GO:0005769
GO:GO:0017112 GO:GO:0030676 GO:GO:0001662 GO:GO:0032855
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:DAAA02005594
EMBL:DAAA02005595 EMBL:DAAA02005596 IPI:IPI00905690
Ensembl:ENSBTAT00000060956 Uniprot:F1MDF3
Length = 1661
Score = 134 (52.2 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 46/148 (31%), Positives = 70/148 (47%)
Query: 207 PRLVEALKGVPCKQVTAGLNFTG----FL-TIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 261
PRL+ V + V ++G L ++R V T G GQLGHGD L R P
Sbjct: 497 PRLLRKAARVKTRTVVLTPTYSGEADALLPSLRTEVWTWGKGKEGQLGHGDVLPRLQPLC 556
Query: 262 IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 321
+ L+ V+ + AG + LA+T VYS+GS + LGH + + PR +
Sbjct: 557 VKCLDGK-EVIHLEAGGYHSLALTAKSQVYSWGSNTFGQLGHSDFPTTV-PRLAKVNSEN 614
Query: 322 GIHVVRVSAGDEHVVAL-DSSGYV-SLC 347
G+ V+AG ++ + L D+ + LC
Sbjct: 615 GVW--SVAAGQDYSLFLVDTEDFQPGLC 640
Score = 130 (50.8 bits), Expect = 9.4e-05, P = 9.4e-05
Identities = 48/171 (28%), Positives = 76/171 (44%)
Query: 183 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
+V+T G GH D P +P V+ L G + AG + LT + V++ GS
Sbjct: 531 EVWTWGKGKEGQLGHGDV-LPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGS 589
Query: 243 NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN-----GVVYSFGSGS 297
NT GQLGH D P+ +A + V +AAG Y L + G+ YS
Sbjct: 590 NTFGQLGHSD-FPTTVPR-LAKVNSENGVWSVAAGQDYSLFLVDTEDFQPGLCYSGRLDP 647
Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSS--GYVS 345
E H + + + + G ++ RV+AG D ++ +D + GY++
Sbjct: 648 TEGDNLPENHSGTKMPVLLSCSKLG-YISRVTAGKDSYLALVDKNIMGYIA 697
Score = 81 (33.6 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 34/132 (25%), Positives = 60/132 (45%)
Query: 103 SSDIVETS-AGNMQIT--TGRYHTLLISNSSV-FSCGSSL---CGVLG--HGPETTQC-V 152
S+ I+E++ G +T TG +HT +++S V + G + C V + PE +
Sbjct: 85 SNPILESALVGQYVVTVATGSFHTGAVTDSGVVYMWGENSAGQCAVANQPYVPEPNPVSI 144
Query: 153 SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA 212
S + + A ++Q++ E H + S +++ G G T P+ +P+ VE
Sbjct: 145 SDSETSPLLAVRILQLACGEEHTLALSLSREIWAWGTGCQL--GLITTTFPVTKPQKVEH 202
Query: 213 LKGVPCKQVTAG 224
L G QV G
Sbjct: 203 LAGRVVLQVACG 214
>UNIPROTKB|F1MD33 [details] [associations]
symbol:F1MD33 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042462 "eye photoreceptor cell development"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0005929 "cilium" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104160 EMBL:DAAA02073693
IPI:IPI00698306 Ensembl:ENSBTAT00000005090 OMA:SAEKHET
Uniprot:F1MD33
Length = 158
Score = 136 (52.9 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 47/162 (29%), Positives = 75/162 (46%)
Query: 182 GQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGV-PCKQVTAGLNFTGFLTIRGHVHT 239
GQV+ G N+ G DT+ R F L+ KQ++AG N + LT G ++T
Sbjct: 3 GQVYATGGNNEGQLGLGDTDERSAFH--LISFFTSQHKIKQLSAGSNTSAALTAEGELYT 60
Query: 240 CGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
G G+LG L + P+ + + E V+Q+A G + + +T V Y+FG G
Sbjct: 61 FGEPESGKLGLPPKLLVNHKVPQLVPGISE--KVIQVACGGGHTVVLTEKAV-YTFGLGQ 117
Query: 298 NFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
LG G + +P+ I++ + K I V G+ H +
Sbjct: 118 FGQLGLGTFTFETSEPKVIESVKDKKIS--HVCCGENHTALI 157
Score = 115 (45.5 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 43/159 (27%), Positives = 78/159 (49%)
Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV-QVSASENHAAFVLQSGQVFTCGD 189
V++ G + G LG G +T + +F I+F ++ H + Q+SA N +A + G+++T G+
Sbjct: 5 VYATGGNNEGQLGLG-DTDERSAFHLISFFTSQHKIKQLSAGSNTSAALTAEGELYTFGE 63
Query: 190 NSSFCCGHRDTNRPIFRPRLVEALKGVPCK--QVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
S G + + ++ + + G+ K QV G T LT + V+T G GQ
Sbjct: 64 PESGKLGLPP--KLLVNHKVPQLVPGISEKVIQVACGGGHTVVLTEKA-VYTFGLGQFGQ 120
Query: 248 LGHGD-TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
LG G T + PK I +++ + + G ++ +T
Sbjct: 121 LGLGTFTFETSEPKVIESVKDK-KISHVCCGENHTALIT 158
>UNIPROTKB|C9JW69 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0031965 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341 IPI:IPI00787306
ProteinModelPortal:C9JW69 SMR:C9JW69 STRING:C9JW69
Ensembl:ENST00000411533 ArrayExpress:C9JW69 Bgee:C9JW69
Uniprot:C9JW69
Length = 372
Score = 156 (60.0 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 74/260 (28%), Positives = 110/260 (42%)
Query: 105 DIVETSAGNMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGP--ETTQCVSFTRINFPS 161
D+V+ AG M HT+ +S S V+S G + G LG E ++ V ++
Sbjct: 85 DVVQAEAGGM-------HTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVP-GKVELQE 136
Query: 162 AAHVVQVSASENHAAFVLQSGQVFTCG---DNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
VVQVSA ++H A + G+VF G DN+ G + + P V+ VP
Sbjct: 137 K--VVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVI-GLLEPMKKSMVP--VQVQLDVPV 191
Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH--------GDT--LDRP-TPKSIAPLEE 267
+V +G + LT G ++T G GQLG G L+R PK + L+
Sbjct: 192 VKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVM-LKS 250
Query: 268 VGSVVQIA-----AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
GS + G + A++ G VY FG + LG P+ + +F+
Sbjct: 251 RGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFKNST 310
Query: 323 IHVVRVSAGDEHVVALDSSG 342
V S G H V +DS G
Sbjct: 311 KSWVGFSGGQHHTVCMDSEG 330
Score = 131 (51.2 bits), Expect = 9.6e-06, P = 9.6e-06
Identities = 41/115 (35%), Positives = 58/115 (50%)
Query: 235 GHVHTCGSNTHGQLGHGDT-LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
G V T G GQLG G+ ++R P ++ E+V VQ AG + + ++ +G VYSF
Sbjct: 52 GLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDV---VQAEAGGMHTVCLSKSGQVYSF 108
Query: 294 GSGSNFCLGHGE--QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSL 346
G LG + E+ P ++ + K VV+VSAGD H AL G V L
Sbjct: 109 GCNDEGALGRDTSVEGSEMVPGKVE-LQEK---VVQVSAGDSHTAALTDDGRVFL 159
>UNIPROTKB|P18754 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=IDA]
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0007088
"regulation of mitosis" evidence=IDA] [GO:0000082 "G1/S transition
of mitotic cell cycle" evidence=IMP] [GO:0007090 "regulation of S
phase of mitotic cell cycle" evidence=IMP] [GO:0042393 "histone
binding" evidence=IDA] [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0000794 "condensed nuclear chromosome" evidence=IDA]
[GO:0007052 "mitotic spindle organization" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0031492 "nucleosomal DNA binding" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0007059
"chromosome segregation" evidence=IMP] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0016032 "viral reproduction" evidence=TAS]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 Reactome:REACT_116125 GO:GO:0007088 GO:GO:0007059
GO:GO:0005654 GO:GO:0016032 GO:GO:0051301 GO:GO:0007067
GO:GO:0007052 GO:GO:0051225 GO:GO:0000082 GO:GO:0031965
GO:GO:0000790 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0000794 GO:GO:0042393 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GO:GO:0007090 GO:GO:0031492 PDB:1I2M PDBsum:1I2M KO:K11493
EMBL:X12654 EMBL:X06130 EMBL:D00591 EMBL:AF498924 EMBL:BC007300
EMBL:BC010067 EMBL:BC036903 EMBL:BC069198 EMBL:S75708
IPI:IPI00001661 IPI:IPI00747309 PIR:A26691 RefSeq:NP_001041659.1
RefSeq:NP_001041660.1 RefSeq:NP_001041664.1 RefSeq:NP_001260.1
UniGene:Hs.469723 PDB:1A12 PDBsum:1A12 ProteinModelPortal:P18754
SMR:P18754 DIP:DIP-35416N IntAct:P18754 MINT:MINT-240062
STRING:P18754 PhosphoSite:P18754 DMDM:132170 PaxDb:P18754
PRIDE:P18754 DNASU:1104 Ensembl:ENST00000373831
Ensembl:ENST00000373832 Ensembl:ENST00000373833
Ensembl:ENST00000398958 GeneID:1104 KEGG:hsa:1104 UCSC:uc001bqa.2
UCSC:uc001bqf.2 CTD:1104 GeneCards:GC01P028834 HGNC:HGNC:1913
HPA:CAB015413 HPA:HPA027573 HPA:HPA027574 MIM:179710
neXtProt:NX_P18754 PharmGKB:PA26449 HOGENOM:HOG000234341
HOVERGEN:HBG017712 OMA:RETTEEG PhylomeDB:P18754
EvolutionaryTrace:P18754 GenomeRNAi:1104 NextBio:4572
ArrayExpress:P18754 Bgee:P18754 CleanEx:HS_RCC1
Genevestigator:P18754 GermOnline:ENSG00000180198 Uniprot:P18754
Length = 421
Score = 156 (60.0 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 74/260 (28%), Positives = 110/260 (42%)
Query: 105 DIVETSAGNMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGP--ETTQCVSFTRINFPS 161
D+V+ AG M HT+ +S S V+S G + G LG E ++ V ++
Sbjct: 68 DVVQAEAGGM-------HTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVP-GKVELQE 119
Query: 162 AAHVVQVSASENHAAFVLQSGQVFTCG---DNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
VVQVSA ++H A + G+VF G DN+ G + + P V+ VP
Sbjct: 120 K--VVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVI-GLLEPMKKSMVP--VQVQLDVPV 174
Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH--------GDT--LDRP-TPKSIAPLEE 267
+V +G + LT G ++T G GQLG G L+R PK + L+
Sbjct: 175 VKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVM-LKS 233
Query: 268 VGSVVQIA-----AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
GS + G + A++ G VY FG + LG P+ + +F+
Sbjct: 234 RGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFKNST 293
Query: 323 IHVVRVSAGDEHVVALDSSG 342
V S G H V +DS G
Sbjct: 294 KSWVGFSGGQHHTVCMDSEG 313
Score = 136 (52.9 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 60/245 (24%), Positives = 105/245 (42%)
Query: 114 MQITTGRYH-TLLISNSSVFSCGSSLCGVLGHGPETTQC----VSFTRINFPSAAHVVQV 168
+++ +G H +L ++ +++ G G LG PE R+ P +++
Sbjct: 175 VKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCV-MLKS 233
Query: 169 SASENHAAF------------VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
S H F + G V+ G ++ G T F P+ + + K
Sbjct: 234 RGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLGTPGTES-CFIPQNLTSFKNS 292
Query: 217 PCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQ 273
V + G + T + G ++ G +G+LG G+ + + P I+ L V SV
Sbjct: 293 TKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPAVSSV-- 350
Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
A G S AVT +G V+++G G+N+ LG G+ D P + + + V+ VS+G +
Sbjct: 351 -ACGASVGYAVTKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMMGKQLENRVVLSVSSGGQ 409
Query: 334 HVVAL 338
H V L
Sbjct: 410 HTVLL 414
Score = 131 (51.2 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 41/115 (35%), Positives = 58/115 (50%)
Query: 235 GHVHTCGSNTHGQLGHGDT-LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
G V T G GQLG G+ ++R P ++ E+V VQ AG + + ++ +G VYSF
Sbjct: 35 GLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDV---VQAEAGGMHTVCLSKSGQVYSF 91
Query: 294 GSGSNFCLGHGE--QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSL 346
G LG + E+ P ++ + K VV+VSAGD H AL G V L
Sbjct: 92 GCNDEGALGRDTSVEGSEMVPGKVE-LQEK---VVQVSAGDSHTAALTDDGRVFL 142
>UNIPROTKB|F1S2Q4 [details] [associations]
symbol:NEK9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PROSITE:PS50012 GeneTree:ENSGT00700000104074 OMA:GCDGTFL
EMBL:CT737372 Ensembl:ENSSSCT00000002648 Uniprot:F1S2Q4
Length = 1004
Score = 161 (61.7 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 64/239 (26%), Positives = 107/239 (44%)
Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
R T+ + +V + +S V G G T Q + + S QV A H A V
Sbjct: 349 RSSTVTETPIAVVTSRTSEVYVWGGGKSTPQKLDVIK----SGCSARQVCAGNTHFAVVT 404
Query: 180 QSGQVFTC-----GDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFLTI 233
+++T G GH D + +R P+ VE L+G +QV+ G +FT +T
Sbjct: 405 VEKELYTWVNMQGGTKLHGQLGHGD--KASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTD 462
Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLE----EVGSVVQIAAGPSYMLAVTGNG 288
G ++ GS+ +G +G +D+ P+ + P++ V Q++ G ++++ +T N
Sbjct: 463 EGQLYAFGSDYYGCMG----VDKVAGPEVLEPMQLNFFSNNPVEQVSCGDNHVVVLTRNK 518
Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSLC 347
VYS+G G LG + D P+ + K + +V V G + L SG V C
Sbjct: 519 EVYSWGCGEYGRLGLDSEEDYYTPQKVDV--PKALIIVAVQCGCDGTFLLTQSGKVLAC 575
Score = 149 (57.5 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 55/262 (20%), Positives = 102/262 (38%)
Query: 98 QSVEHSSDIVETSAGNMQITTGRYHTLLIS-NSSVFSC-----GSSLCGVLGHGPETTQC 151
+S D++++ Q+ G H +++ +++ G+ L G LGHG + +
Sbjct: 375 KSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYR 434
Query: 152 VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRP-IFRPRLV 210
+ + QVS ++ V GQ++ G + C G P + P +
Sbjct: 435 QP-KHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQL 493
Query: 211 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVG 269
P +QV+ G N LT V++ G +G+LG D TP+ + P +
Sbjct: 494 NFFSNNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALII 553
Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGS----GSNFCLG----HGEQHDELQPRAIQTFRRK 321
VQ +++L +G + G N C+ H H+ + ++
Sbjct: 554 VAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQL 613
Query: 322 GIHVVR-VSAGDEHVVALDSSG 342
+ +R V+ G H A+D G
Sbjct: 614 SFYKIRTVAPGKTHTAAIDERG 635
Score = 145 (56.1 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 60/247 (24%), Positives = 104/247 (42%)
Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLG----HGPETTQCVSFTRINFPSAAHVVQVS 169
Q++ G T+ +++ +++ GS G +G GPE + + ++NF S V QVS
Sbjct: 449 QVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPM---QLNFFSNNPVEQVS 505
Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
+NH + ++ +V++ G G D+ + P+ V+ K + V G + T
Sbjct: 506 CGDNHVVVLTRNKEVYSWGCGEYGRLG-LDSEEDYYTPQKVDVPKALIIVAVQCGCDGTF 564
Query: 230 FLTIRGHVHTCGSNTHGQLG----------HGDTLDRPTPKSIAPLEEVG--SVVQIAAG 277
LT G V CG N +LG H + P S +++ + +A G
Sbjct: 565 LLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTVAPG 624
Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
++ A+ G + +FG LG G L + G V+RVS GDE +A
Sbjct: 625 KTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGG-PLGGKQVIRVSCGDEFTIA 683
Query: 338 LDSSGYV 344
++
Sbjct: 684 ATDDNHI 690
Score = 126 (49.4 bits), Expect = 0.00015, P = 0.00015
Identities = 50/198 (25%), Positives = 83/198 (41%)
Query: 115 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
Q++ G H ++++ N V+S G G LG E +++ P A +V V +
Sbjct: 503 QVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTP-QKVDVPKALIIVAVQCGCD 561
Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDT-----NRPIFR--P-----RLVEALKGVPCKQV 221
+ QSG+V CG N G N + P L + L + V
Sbjct: 562 GTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTV 621
Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSY 280
G T + RG + T G N GQLG G+ R + PL V++++ G +
Sbjct: 622 APGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGK-QVIRVSCGDEF 680
Query: 281 MLAVTGNGVVYSFGSGSN 298
+A T + ++++G+G N
Sbjct: 681 TIAATDDNHIFAWGNGGN 698
>TAIR|locus:2159295 [details] [associations]
symbol:RUG3 "RCC1/UVR8/GEF-like 3" species:3702
"Arabidopsis thaliana" [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0008536 "Ran GTPase binding" evidence=ISS] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0008380 "RNA splicing"
evidence=IMP] [GO:0032981 "mitochondrial respiratory chain complex
I assembly" evidence=IMP] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 EMBL:CP002688 GO:GO:0008380 EMBL:AB015472
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0032981
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 UniGene:At.29139
UniGene:At.50545 HSSP:P18754 IPI:IPI00532631 RefSeq:NP_200895.2
ProteinModelPortal:Q9FJG9 SMR:Q9FJG9 PRIDE:Q9FJG9
EnsemblPlants:AT5G60870.1 GeneID:836208 KEGG:ath:AT5G60870
TAIR:At5g60870 HOGENOM:HOG000030010 InParanoid:Q9FJG9 OMA:ISCGLFH
PhylomeDB:Q9FJG9 ProtClustDB:CLSN2681113 Genevestigator:Q9FJG9
Uniprot:Q9FJG9
Length = 445
Score = 156 (60.0 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 54/243 (22%), Positives = 106/243 (43%)
Query: 108 ETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ 167
++S+ + I+ G +H+ L + ++ G G LG G E + V +N H ++
Sbjct: 98 DSSSFRIGISCGLFHSGLTIDGDLWIWGKGDGGRLGFGQENS--VFVPNLNPLFEEHSIR 155
Query: 168 -VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
++ H+ + G VFT G GH+ R + PR V+ +
Sbjct: 156 CIALGGLHSVALTHQGDVFTWGYGGFGALGHKVYTRELV-PRRVDDSWDCKISAIATSGT 214
Query: 227 FTGFLTIRGHVHTCGSNT-HGQLGHGDTLDRPTPKSIAPLEEVGS----VVQIAAGPSYM 281
T +T G ++ G G+LG G ++ +V + V ++ G +
Sbjct: 215 HTAAITESGELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALTVPVASVSCGGFFT 274
Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
+A+T G ++++G+ SN+ LG G+ +P + + +G+ + +++ G H +AL
Sbjct: 275 MALTKEGQLWNWGANSNYELGRGDNLGGWEPMPVPSL--EGVRITQIACGGYHSLALTEE 332
Query: 342 GYV 344
G V
Sbjct: 333 GKV 335
Score = 153 (58.9 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 67/237 (28%), Positives = 103/237 (43%)
Query: 116 ITTGRYHTLLISNSS-VFSCGSSLC-GVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASE 172
I T HT I+ S ++ G G LG GP ++ PS + V AS
Sbjct: 209 IATSGTHTAAITESGELYMWGREEGDGRLGLGPGRGPNEG-GGLSVPSKVKALTVPVASV 267
Query: 173 NHAAF----VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
+ F + + GQ++ G NS++ G D N + P V +L+GV Q+ G +
Sbjct: 268 SCGGFFTMALTKEGQLWNWGANSNYELGRGD-NLGGWEPMPVPSLEGVRITQIACGGYHS 326
Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
LT G V + G HGQLG ++ P I L + +V IA+G S A+T G
Sbjct: 327 LALTEEGKVLSWGHGGHGQLGSSSLRNQKVPTEIEALADK-KIVFIASGGSSSAAITDGG 385
Query: 289 VVYSFGSGSNFCLG-HGEQHDELQPRAIQTFRRKGI---H-VVRVSAGDEHVVALDS 340
++ +G+ +F LG G + P + + H V+ +S G H + L S
Sbjct: 386 ELWMWGNAKDFQLGVPGLPEIQTTPVEVNFLTEEDECQPHKVISISIGASHALCLVS 442
>UNIPROTKB|F1RJL0 [details] [associations]
symbol:WBSCR16 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104312 OMA:MVTLAKS
EMBL:FP326664 RefSeq:XP_003354559.2 Ensembl:ENSSSCT00000008468
GeneID:100513850 KEGG:ssc:100513850 Uniprot:F1RJL0
Length = 470
Score = 156 (60.0 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 57/192 (29%), Positives = 88/192 (45%)
Query: 160 PSAAHVVQVSASENHAAFVLQSGQ-VFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVP 217
P V+QVS H+ VL G+ VF+ G+NS CG + I+ V ++
Sbjct: 177 PQETQVLQVSCGRAHS-LVLTDGEGVFSMGNNSYGQCGRKVVENEIYSESHKVHRMQDFD 235
Query: 218 CK--QVTAGLNFTGFLTIRGHVHTCGSNTHGQ--LGHGDTLDRPTPKSIAPLEEVGSVVQ 273
+ QV G + + FLT +G V++CG GQ LGH + PT K L V +VVQ
Sbjct: 236 GQVVQVACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSAPT-KLGGDLAGV-NVVQ 293
Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGD 332
+A LAV+ +G ++ +G+ L ++ PR + F G V + + G
Sbjct: 294 VATYGDCCLAVSADGSLFGWGNSEYLQLASVTDSTQVNVPRCLP-FSGVG-QVKQAACGG 351
Query: 333 EHVVALDSSGYV 344
L+ G+V
Sbjct: 352 TGCAVLNGEGHV 363
Score = 142 (55.0 bits), Expect = 8.5e-07, P = 8.5e-07
Identities = 64/239 (26%), Positives = 100/239 (41%)
Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA-HVVQVSAS 171
+Q+ G+ H+L +++ V+SCG G G G T++ A +VVQV+
Sbjct: 239 VQVACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSAP-TKLGGDLAGVNVVQVATY 297
Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV-PCKQVTAGLNFTGF 230
+ V G +F G++ + + PR + GV KQ G
Sbjct: 298 GDCCLAVSADGSLFGWGNSEYLQLASVTDSTQVNVPRCLP-FSGVGQVKQAACGGTGCAV 356
Query: 231 LTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAP----LEEVGSVVQIA---AGPSYML 282
L GHV G +G LG G L + P+ I P L E+ V+++ G S+
Sbjct: 357 LNGEGHVFVWG---YGILGKGPNLVETALPEMIPPTLFGLTELNPEVRVSRIRCGLSHFA 413
Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
A+T G ++ +G CLG G D+ P + G V V+ G +H+V L S
Sbjct: 414 ALTDRGELFVWGKNIRGCLGIGRLEDQYFPWRVTM---PG-EPVDVACGVDHMVTLAKS 468
Score = 142 (55.0 bits), Expect = 8.5e-07, P = 8.5e-07
Identities = 64/244 (26%), Positives = 107/244 (43%)
Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFT-RINFPSA--AHVVQVS 169
+Q++ GR H+L++++ VFS G++ G G + S + +++ VVQV+
Sbjct: 183 LQVSCGRAHSLVLTDGEGVFSMGNNSYGQCGRKVVENEIYSESHKVHRMQDFDGQVVQVA 242
Query: 170 ASENHAAFVLQSGQVFTCG--DNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLN 226
++H+ F+ G+V++CG + GH + T+ P +L L GV QV +
Sbjct: 243 CGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSAPT---KLGGDLAGVNVVQVATYGD 299
Query: 227 FTGFLTIRGHVHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
++ G + G++ + QL D+ P+ + P VG V Q A G + +
Sbjct: 300 CCLAVSADGSLFGWGNSEYLQLASVTDSTQVNVPRCL-PFSGVGQVKQAACGGTGCAVLN 358
Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQ------TFRRKGIHVVRVSAGDEHVVAL 338
G G V+ +G G LG G E P I T + V R+ G H AL
Sbjct: 359 GEGHVFVWGYG---ILGKGPNLVETALPEMIPPTLFGLTELNPEVRVSRIRCGLSHFAAL 415
Query: 339 DSSG 342
G
Sbjct: 416 TDRG 419
>FB|FBgn0002638 [details] [associations]
symbol:Rcc1 "Regulator of chromosome condensation 1 ortholog
(H. sapiens)" species:7227 "Drosophila melanogaster" [GO:0005634
"nucleus" evidence=ISS;NAS;IDA] [GO:0007417 "central nervous system
development" evidence=IDA] [GO:0030261 "chromosome condensation"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=ISS;IDA]
[GO:0007076 "mitotic chromosome condensation" evidence=NAS]
[GO:0005087 "Ran guanyl-nucleotide exchange factor activity"
evidence=ISS;NAS] [GO:0005737 "cytoplasm" evidence=NAS] [GO:0007346
"regulation of mitotic cell cycle" evidence=IDA] [GO:0006607
"NLS-bearing substrate import into nucleus" evidence=IMP]
[GO:0000793 "condensed chromosome" evidence=IDA] [GO:0046822
"regulation of nucleocytoplasmic transport" evidence=IMP]
[GO:0050767 "regulation of neurogenesis" evidence=IMP] [GO:0022008
"neurogenesis" evidence=IMP] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0007346 GO:GO:0005737 EMBL:AE014296
GO:GO:0051301 GO:GO:0007067 GO:GO:0007417 GO:GO:0046822
GO:GO:0003682 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005085 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 GO:GO:0050767 PDB:3MVD PDBsum:3MVD
GeneTree:ENSGT00700000104160 EMBL:X58530 EMBL:AY070540 PIR:S15028
RefSeq:NP_523943.1 RefSeq:NP_729118.1 RefSeq:NP_729119.1
UniGene:Dm.8023 ProteinModelPortal:P25171 SMR:P25171 DIP:DIP-17766N
IntAct:P25171 MINT:MINT-781282 STRING:P25171 PaxDb:P25171
EnsemblMetazoa:FBtr0077074 EnsemblMetazoa:FBtr0077075
EnsemblMetazoa:FBtr0077076 GeneID:38669 KEGG:dme:Dmel_CG10480
CTD:38669 FlyBase:FBgn0002638 InParanoid:P25171 KO:K11493
OMA:PFEAIWA OrthoDB:EOG437PW4 PhylomeDB:P25171 ChiTaRS:Bj1
GenomeRNAi:38669 NextBio:809817 Bgee:P25171 GermOnline:CG10480
Uniprot:P25171
Length = 547
Score = 157 (60.3 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 60/236 (25%), Positives = 102/236 (43%)
Query: 116 ITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTR----INFPSAAHVVQVSA 170
I +G H ++++ + VF+ G + G LG E + R + P+ + +
Sbjct: 183 IASGADHLVILTTAGKVFTVGCAEQGQLGRLSERSISGEGRRGKRDLLRPTQLIITRAKP 242
Query: 171 SE-----NHAAFVLQSGQ--VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
E N+ F+ +S ++ G N+ H + + LK + + +
Sbjct: 243 FEAIWATNYCTFMRESQTQVIWATGLNNFKQLAHETKGKEFALTPIKTELKDI--RHIAG 300
Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAGPSYML 282
G + T LT G +G+LG GD D P + L E +V + G
Sbjct: 301 GQHHTVILTTDLKCSVVGRPEYGRLGLGDVKDVVEKPTIVKKLTE--KIVSVGCGEVCSY 358
Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
AVT +G +YS+GSG N LG G+ DEL+P + + +G H++ S G +H + L
Sbjct: 359 AVTIDGKLYSWGSGVNNQLGVGDGDDELEPIVVVSKNTQGKHMLLASGGGQHAIFL 414
Score = 138 (53.6 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 41/116 (35%), Positives = 57/116 (49%)
Query: 232 TIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
T+ G+V CG+ GQLG G D L+R K ++P+ + V I+AG + L +T +G +
Sbjct: 39 TVLGNVLVCGNGDVGQLGLGEDILER---KRLSPVAGIPDAVDISAGGMHNLVLTKSGDI 95
Query: 291 YSFGSGSNFCLGHGEQHD--ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
YSFG LG D E +P I G + +SAGD H L G V
Sbjct: 96 YSFGCNDEGALGRDTSEDGSESKPDLIDL---PG-KALCISAGDSHSACLLEDGRV 147
Score = 125 (49.1 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 41/142 (28%), Positives = 72/142 (50%)
Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVS 169
+ I+ G H L+++ S ++S G + G LG +T++ S ++ I+ P A + +S
Sbjct: 77 VDISAGGMHNLVLTKSGDIYSFGCNDEGALGR--DTSEDGSESKPDLIDLPGKA--LCIS 132
Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRL--VEALKGVPCKQVTAGLNF 227
A ++H+A +L+ G+VF G SF H + I + ++ ++G C + +G +
Sbjct: 133 AGDSHSACLLEDGRVFAWG---SFRDSHGNMGLTIDGNKRTPIDLMEGTVCCSIASGADH 189
Query: 228 TGFLTIRGHVHTCGSNTHGQLG 249
LT G V T G GQLG
Sbjct: 190 LVILTTAGKVFTVGCAEQGQLG 211
>UNIPROTKB|E1BIS5 [details] [associations]
symbol:WBSCR16 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104312 CTD:81554 OMA:MVTLAKS
EMBL:DAAA02058190 IPI:IPI00705939 RefSeq:NP_001179275.1
UniGene:Bt.1520 Ensembl:ENSBTAT00000015608 GeneID:513273
KEGG:bta:513273 NextBio:20870790 Uniprot:E1BIS5
Length = 464
Score = 155 (59.6 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 58/193 (30%), Positives = 88/193 (45%)
Query: 160 PSAAHVVQVSASENHAAFVLQSGQ-VFTCGDNSSFCCGHRDTNRPIF----RPRLVEALK 214
P V+QVS H+ VL G+ VF+ G+NS CG + I+ R ++
Sbjct: 171 PQETRVLQVSCGRAHS-LVLTDGEGVFSMGNNSYGQCGRKVVENEIYSESHRVHRMQDFD 229
Query: 215 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ--LGHGDTLDRPTPKSIAPLEEVGSVV 272
G QV G + + FLT +G V++CG GQ LGH + PT K L V +VV
Sbjct: 230 G-QVVQVACGQDHSLFLTDQGEVYSCGWGADGQTGLGHYNITSTPT-KLGGDLAGV-NVV 286
Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAG 331
Q+A LAV+ +G ++ +G+ L ++ PR + F G V + + G
Sbjct: 287 QVATYGDCCLAVSADGGLFGWGNSEYLQLASVTDSTQVNVPRCLP-FSGVG-QVKQAACG 344
Query: 332 DEHVVALDSSGYV 344
L+ G+V
Sbjct: 345 GTGCAVLNGEGHV 357
Score = 148 (57.2 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 66/244 (27%), Positives = 109/244 (44%)
Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFT-RINFPSA--AHVVQVS 169
+Q++ GR H+L++++ VFS G++ G G + S + R++ VVQV+
Sbjct: 177 LQVSCGRAHSLVLTDGEGVFSMGNNSYGQCGRKVVENEIYSESHRVHRMQDFDGQVVQVA 236
Query: 170 ASENHAAFVLQSGQVFTCG--DNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLN 226
++H+ F+ G+V++CG + GH + T+ P +L L GV QV +
Sbjct: 237 CGQDHSLFLTDQGEVYSCGWGADGQTGLGHYNITSTPT---KLGGDLAGVNVVQVATYGD 293
Query: 227 FTGFLTIRGHVHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
++ G + G++ + QL D+ P+ + P VG V Q A G + +
Sbjct: 294 CCLAVSADGGLFGWGNSEYLQLASVTDSTQVNVPRCL-PFSGVGQVKQAACGGTGCAVLN 352
Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQT--FR----RKGIHVVRVSAGDEHVVAL 338
G G V+ +G G LG G E P I F G+ V R+ G H AL
Sbjct: 353 GEGHVFVWGYG---ILGKGPNLLETALPEMIPPTLFGLSEFNPGVQVSRIRCGLSHFAAL 409
Query: 339 DSSG 342
+ G
Sbjct: 410 TNRG 413
Score = 140 (54.3 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 64/239 (26%), Positives = 100/239 (41%)
Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA-HVVQVSAS 171
+Q+ G+ H+L +++ V+SCG G G G T++ A +VVQV+
Sbjct: 233 VQVACGQDHSLFLTDQGEVYSCGWGADGQTGLGHYNITSTP-TKLGGDLAGVNVVQVATY 291
Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV-PCKQVTAGLNFTGF 230
+ V G +F G++ + + PR + GV KQ G
Sbjct: 292 GDCCLAVSADGGLFGWGNSEYLQLASVTDSTQVNVPRCLP-FSGVGQVKQAACGGTGCAV 350
Query: 231 LTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAP----LEEVGSVVQIA---AGPSYML 282
L GHV G +G LG G + L+ P+ I P L E VQ++ G S+
Sbjct: 351 LNGEGHVFVWG---YGILGKGPNLLETALPEMIPPTLFGLSEFNPGVQVSRIRCGLSHFA 407
Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
A+T G ++ +G CLG G D+ P + G + V+ G +H+V L S
Sbjct: 408 ALTNRGELFVWGKNIRGCLGIGRLEDQYFPWRVTM---PG-EPMDVACGVDHMVTLARS 462
>UNIPROTKB|Q8TD19 [details] [associations]
symbol:NEK9 "Serine/threonine-protein kinase Nek9"
species:9606 "Homo sapiens" [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005739 "mitochondrion" evidence=IDA]
InterPro:IPR000719 InterPro:IPR002290 InterPro:IPR008271
InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0051301
GO:GO:0007067 GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112
GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
EMBL:AC007055 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
KO:K08857 CleanEx:HS_NEK8 EMBL:AY048580 EMBL:AY080896 EMBL:AB082526
EMBL:BC009336 EMBL:BC093881 EMBL:BC112101 IPI:IPI00301609
RefSeq:NP_149107.4 UniGene:Hs.7200 ProteinModelPortal:Q8TD19
SMR:Q8TD19 IntAct:Q8TD19 MINT:MINT-2984282 STRING:Q8TD19
PhosphoSite:Q8TD19 DMDM:116242675 PaxDb:Q8TD19 PeptideAtlas:Q8TD19
PRIDE:Q8TD19 DNASU:91754 Ensembl:ENST00000238616 GeneID:91754
KEGG:hsa:91754 UCSC:uc001xrl.3 CTD:91754 GeneCards:GC14M075548
HGNC:HGNC:18591 HPA:HPA001405 MIM:609798 neXtProt:NX_Q8TD19
PharmGKB:PA38593 HOVERGEN:HBG039572 InParanoid:Q8TD19 OMA:GCDGTFL
OrthoDB:EOG4NZTSM PhylomeDB:Q8TD19 BindingDB:Q8TD19
ChEMBL:CHEMBL5257 GenomeRNAi:91754 NextBio:77443
ArrayExpress:Q8TD19 Bgee:Q8TD19 CleanEx:HS_NEK9
Genevestigator:Q8TD19 GermOnline:ENSG00000119638 Uniprot:Q8TD19
Length = 979
Score = 159 (61.0 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 64/239 (26%), Positives = 107/239 (44%)
Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
R T+ + +V + +S V G G T Q + + S QV A H A V
Sbjct: 330 RSSTVTEAPIAVVTSRTSEVYVWGGGKSTPQKLDVIK----SGCSARQVCAGNTHFAVVT 385
Query: 180 QSGQVFTC-----GDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFLTI 233
+++T G GH D + +R P+ VE L+G +QV+ G +FT +T
Sbjct: 386 VEKELYTWVNMQGGTKLHGQLGHGD--KASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTD 443
Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEE----VGSVVQIAAGPSYMLAVTGNG 288
G ++ GS+ +G +G +D+ P+ + P++ V Q++ G ++++ +T N
Sbjct: 444 EGQLYAFGSDYYGCMG----VDKVAGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNK 499
Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSLC 347
VYS+G G LG + D P+ + K + +V V G + L SG V C
Sbjct: 500 EVYSWGCGEYGRLGLDSEEDYYTPQKVDV--PKALIIVAVQCGCDGTFLLTQSGKVLAC 556
Score = 146 (56.5 bits), Expect = 8.8e-07, P = 8.8e-07
Identities = 54/262 (20%), Positives = 102/262 (38%)
Query: 98 QSVEHSSDIVETSAGNMQITTGRYHTLLIS-NSSVFSC-----GSSLCGVLGHGPETTQC 151
+S D++++ Q+ G H +++ +++ G+ L G LGHG + +
Sbjct: 356 KSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYR 415
Query: 152 VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRP-IFRPRLV 210
+ + QVS ++ V GQ++ G + C G P + P +
Sbjct: 416 QP-KHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQL 474
Query: 211 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVG 269
P +QV+ G N LT V++ G +G+LG D TP+ + P +
Sbjct: 475 NFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALII 534
Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGS----GSNFCLG----HGEQHDELQPRAIQTFRRK 321
VQ +++L +G + G N C+ H H+ + ++
Sbjct: 535 VAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQL 594
Query: 322 GIHVVR-VSAGDEHVVALDSSG 342
+ +R ++ G H A+D G
Sbjct: 595 SFYKIRTIAPGKTHTAAIDERG 616
Score = 143 (55.4 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 60/247 (24%), Positives = 104/247 (42%)
Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLG----HGPETTQCVSFTRINFPSAAHVVQVS 169
Q++ G T+ +++ +++ GS G +G GPE + + ++NF + V QVS
Sbjct: 430 QVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPM---QLNFFLSNPVEQVS 486
Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
+NH + ++ +V++ G G D+ + P+ V+ K + V G + T
Sbjct: 487 CGDNHVVVLTRNKEVYSWGCGEYGRLG-LDSEEDYYTPQKVDVPKALIIVAVQCGCDGTF 545
Query: 230 FLTIRGHVHTCGSNTHGQLG----------HGDTLDRPTPKSIAPLEEVG--SVVQIAAG 277
LT G V CG N +LG H + P S +++ + IA G
Sbjct: 546 LLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPG 605
Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
++ A+ G + +FG LG G L + G V+RVS GDE +A
Sbjct: 606 KTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGG-PLGGKQVIRVSCGDEFTIA 664
Query: 338 LDSSGYV 344
++
Sbjct: 665 ATDDNHI 671
Score = 125 (49.1 bits), Expect = 0.00018, P = 0.00018
Identities = 49/198 (24%), Positives = 83/198 (41%)
Query: 115 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
Q++ G H ++++ N V+S G G LG E +++ P A +V V +
Sbjct: 484 QVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTP-QKVDVPKALIIVAVQCGCD 542
Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDT-----NRPIFR--P-----RLVEALKGVPCKQV 221
+ QSG+V CG N G N + P L + L + +
Sbjct: 543 GTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTI 602
Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSY 280
G T + RG + T G N GQLG G+ R + PL V++++ G +
Sbjct: 603 APGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGK-QVIRVSCGDEF 661
Query: 281 MLAVTGNGVVYSFGSGSN 298
+A T + ++++G+G N
Sbjct: 662 TIAATDDNHIFAWGNGGN 679
>UNIPROTKB|Q96I51 [details] [associations]
symbol:WBSCR16 "Williams-Beuren syndrome chromosomal region
16 protein" species:9606 "Homo sapiens" [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 Orphanet:904 MIM:194050
EMBL:AF410455 EMBL:AL136804 EMBL:CH471292 EMBL:BC007823
EMBL:BC019008 IPI:IPI00305992 RefSeq:NP_110425.1 UniGene:Hs.723684
ProteinModelPortal:Q96I51 SMR:Q96I51 IntAct:Q96I51 STRING:Q96I51
PhosphoSite:Q96I51 DMDM:116242843 PaxDb:Q96I51 PeptideAtlas:Q96I51
PRIDE:Q96I51 DNASU:81554 Ensembl:ENST00000329959 GeneID:81554
KEGG:hsa:81554 UCSC:uc003ubr.3 CTD:81554 GeneCards:GC07M074456
HGNC:HGNC:14948 neXtProt:NX_Q96I51 PharmGKB:PA37941
HOGENOM:HOG000232125 HOVERGEN:HBG054246 InParanoid:Q96I51
OMA:MVTLAKS OrthoDB:EOG4F1X33 PhylomeDB:Q96I51 ChiTaRS:WBSCR16
GenomeRNAi:81554 NextBio:71806 ArrayExpress:Q96I51 Bgee:Q96I51
CleanEx:HS_WBSCR16 Genevestigator:Q96I51 GermOnline:ENSG00000174374
Uniprot:Q96I51
Length = 464
Score = 154 (59.3 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 57/192 (29%), Positives = 85/192 (44%)
Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF----RPRLVEALKG 215
P V+QVS H+ + VF+ G+NS CG + I+ R ++ G
Sbjct: 171 PQETRVLQVSCGRAHSLVLTDREGVFSMGNNSYGQCGRKVVENEIYSESHRVHRMQDFDG 230
Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ--LGHGDTLDRPTPKSIAPLEEVGSVVQ 273
QV G + + FLT +G V++CG GQ LGH + PT K L V +V+Q
Sbjct: 231 -QVVQVACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSSPT-KLGGDLAGV-NVIQ 287
Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA-GD 332
+A LAV+ +G + FG G++ L D Q + G+ VR +A G
Sbjct: 288 VATYGDCCLAVSADGGL--FGWGNSEYLQLASVTDSTQVNVPRCLHFSGVGKVRQAACGG 345
Query: 333 EHVVALDSSGYV 344
L+ G+V
Sbjct: 346 TGCAVLNGEGHV 357
Score = 141 (54.7 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 63/239 (26%), Positives = 100/239 (41%)
Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA-HVVQVSAS 171
+Q+ G+ H+L +++ V+SCG G G G S T++ A +V+QV+
Sbjct: 233 VQVACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITS-SPTKLGGDLAGVNVIQVATY 291
Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV-PCKQVTAGLNFTGF 230
+ V G +F G++ + + PR + GV +Q G
Sbjct: 292 GDCCLAVSADGGLFGWGNSEYLQLASVTDSTQVNVPRCLH-FSGVGKVRQAACGGTGCAV 350
Query: 231 LTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAP----LEEVGSVVQIA---AGPSYML 282
L GHV G +G LG G L + P+ I P L E +Q++ G S+
Sbjct: 351 LNGEGHVFVWG---YGILGKGPNLVESAVPEMIPPTLFGLTEFNPEIQVSRIRCGLSHFA 407
Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
A+T G ++ +G CLG G D+ P + G V V+ G +H+V L S
Sbjct: 408 ALTNKGELFVWGKNIRGCLGIGRLEDQYFPWRVTM---PG-EPVDVACGVDHMVTLAKS 462
Score = 134 (52.2 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 65/244 (26%), Positives = 107/244 (43%)
Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFT-RINFPSA--AHVVQVS 169
+Q++ GR H+L++++ VFS G++ G G + S + R++ VVQV+
Sbjct: 177 LQVSCGRAHSLVLTDREGVFSMGNNSYGQCGRKVVENEIYSESHRVHRMQDFDGQVVQVA 236
Query: 170 ASENHAAFVLQSGQVFTCG--DNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLN 226
++H+ F+ G+V++CG + GH + T+ P +L L GV QV +
Sbjct: 237 CGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSSPT---KLGGDLAGVNVIQVATYGD 293
Query: 227 FTGFLTIRGHVHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
++ G + G++ + QL D+ P+ + VG V Q A G + +
Sbjct: 294 CCLAVSADGGLFGWGNSEYLQLASVTDSTQVNVPRCLH-FSGVGKVRQAACGGTGCAVLN 352
Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQ------TFRRKGIHVVRVSAGDEHVVAL 338
G G V+ +G G LG G E P I T I V R+ G H AL
Sbjct: 353 GEGHVFVWGYG---ILGKGPNLVESAVPEMIPPTLFGLTEFNPEIQVSRIRCGLSHFAAL 409
Query: 339 DSSG 342
+ G
Sbjct: 410 TNKG 413
>TAIR|locus:2144291 [details] [associations]
symbol:AT5G11580 "AT5G11580" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008536 "Ran GTPase binding" evidence=ISS]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002688 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 HSSP:P18754 EMBL:AY058861 EMBL:AY079040
IPI:IPI00537184 RefSeq:NP_568250.1 UniGene:At.5137 UniGene:At.75215
ProteinModelPortal:Q93Z10 SMR:Q93Z10 PRIDE:Q93Z10
EnsemblPlants:AT5G11580.1 GeneID:831030 KEGG:ath:AT5G11580
TAIR:At5g11580 InParanoid:Q93Z10 OMA:WTFGLGD PhylomeDB:Q93Z10
ProtClustDB:CLSN2689608 Genevestigator:Q93Z10 Uniprot:Q93Z10
Length = 553
Score = 124 (48.7 bits), Expect = 0.00011, P = 0.00011
Identities = 29/77 (37%), Positives = 48/77 (62%)
Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ-TFRRKG--IHVVR 327
++ +AAG ++ +A+TG+G VYS+G G LG G++ DEL P ++ + +G I +V
Sbjct: 18 IISLAAGEAHTIALTGDGCVYSWGRGMFGRLGTGKESDELVPVLVEFPNQAEGDRIRIVG 77
Query: 328 VSAGDEHVVALDSSGYV 344
V+AG H +A+ G V
Sbjct: 78 VAAGAYHSLAVSDDGSV 94
Score = 117 (46.2 bits), Expect = 4.0e-08, Sum P(2) = 4.0e-08
Identities = 33/117 (28%), Positives = 51/117 (43%)
Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG--SVVQIAAGPSYMLAVT-------GN 287
+++ G+N HGQLG GD R P+++ + +V IA G + +T G
Sbjct: 229 LYSWGNNHHGQLGLGDGESRARPQTVETFNQKSGLTVYDIACGAHHTALLTYRKETPKGP 288
Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
+ ++FG G N LGH P + ++V V G H + S GYV
Sbjct: 289 SICWTFGFGENGQLGHRSNKSSSLPEPVSDLPEHA-YLVSVDCGLFHTSVVSSEGYV 344
Score = 83 (34.3 bits), Expect = 4.0e-08, Sum P(2) = 4.0e-08
Identities = 25/83 (30%), Positives = 39/83 (46%)
Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH-----VVQ 167
+ + G HT+ L + V+S G + G LG G E+ + V + FP+ A +V
Sbjct: 19 ISLAAGEAHTIALTGDGCVYSWGRGMFGRLGTGKESDELVPVL-VEFPNQAEGDRIRIVG 77
Query: 168 VSASENHAAFVLQSGQVFTCGDN 190
V+A H+ V G V+ G N
Sbjct: 78 VAAGAYHSLAVSDDGSVWCWGYN 100
>UNIPROTKB|E2QYP0 [details] [associations]
symbol:NEK9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0019901 "protein kinase binding"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] InterPro:IPR000719
InterPro:IPR002290 InterPro:IPR008271 InterPro:IPR011009
Pfam:PF00069 PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS50012 KO:K08857
GeneTree:ENSGT00700000104074 CTD:91754 OMA:GCDGTFL
EMBL:AAEX03005855 RefSeq:XP_547912.3 Ensembl:ENSCAFT00000026967
GeneID:490790 KEGG:cfa:490790 NextBio:20863745 Uniprot:E2QYP0
Length = 976
Score = 158 (60.7 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 64/239 (26%), Positives = 107/239 (44%)
Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
R T+ + +V + +S V G G T Q + + S QV A H A V
Sbjct: 330 RSSTVTEAPIAVVTSRTSEVYVWGGGKSTPQKLDVIK----SGCSARQVCAGNTHFAVVT 385
Query: 180 QSGQVFTC-----GDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFLTI 233
+++T G GH D + +R P+ VE L+G +QV+ G +FT +T
Sbjct: 386 VEKELYTWVNMQGGTKLHGQLGHGD--KASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTD 443
Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEV----GSVVQIAAGPSYMLAVTGNG 288
G ++ GS+ +G +G +D+ P+ + P++ V Q++ G ++++ +T N
Sbjct: 444 EGQLYAFGSDYYGCMG----VDKVAGPEVLEPMQLNFFLNNPVEQVSCGDNHVVVLTRNK 499
Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSLC 347
VYS+G G LG + D P+ + K + +V V G + L SG V C
Sbjct: 500 EVYSWGCGEYGRLGLDSEEDYYTPQKVDV--PKALIIVAVQCGCDGTFLLTQSGKVLAC 556
Score = 145 (56.1 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 54/262 (20%), Positives = 102/262 (38%)
Query: 98 QSVEHSSDIVETSAGNMQITTGRYHTLLIS-NSSVFSC-----GSSLCGVLGHGPETTQC 151
+S D++++ Q+ G H +++ +++ G+ L G LGHG + +
Sbjct: 356 KSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYR 415
Query: 152 VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRP-IFRPRLV 210
+ + QVS ++ V GQ++ G + C G P + P +
Sbjct: 416 QP-KHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQL 474
Query: 211 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVG 269
P +QV+ G N LT V++ G +G+LG D TP+ + P +
Sbjct: 475 NFFLNNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALII 534
Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGS----GSNFCLG----HGEQHDELQPRAIQTFRRK 321
VQ +++L +G + G N C+ H H+ + ++
Sbjct: 535 VAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEIPYTTSFTLAKQL 594
Query: 322 GIHVVR-VSAGDEHVVALDSSG 342
+ +R ++ G H A+D G
Sbjct: 595 SFYKIRTIAPGKTHTAAIDERG 616
Score = 140 (54.3 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 60/247 (24%), Positives = 103/247 (41%)
Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLG----HGPETTQCVSFTRINFPSAAHVVQVS 169
Q++ G T+ +++ +++ GS G +G GPE + + ++NF V QVS
Sbjct: 430 QVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPM---QLNFFLNNPVEQVS 486
Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
+NH + ++ +V++ G G D+ + P+ V+ K + V G + T
Sbjct: 487 CGDNHVVVLTRNKEVYSWGCGEYGRLG-LDSEEDYYTPQKVDVPKALIIVAVQCGCDGTF 545
Query: 230 FLTIRGHVHTCGSNTHGQLG----------HGDTLDRPTPKSIAPLEEVG--SVVQIAAG 277
LT G V CG N +LG H + P S +++ + IA G
Sbjct: 546 LLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEIPYTTSFTLAKQLSFYKIRTIAPG 605
Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
++ A+ G + +FG LG G L + G V+RVS GDE +A
Sbjct: 606 KTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGG-PLGGKQVIRVSCGDEFTIA 664
Query: 338 LDSSGYV 344
++
Sbjct: 665 ATDDNHI 671
Score = 125 (49.1 bits), Expect = 0.00018, P = 0.00018
Identities = 49/198 (24%), Positives = 83/198 (41%)
Query: 115 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
Q++ G H ++++ N V+S G G LG E +++ P A +V V +
Sbjct: 484 QVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTP-QKVDVPKALIIVAVQCGCD 542
Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDT-----NRPIFR--P-----RLVEALKGVPCKQV 221
+ QSG+V CG N G N + P L + L + +
Sbjct: 543 GTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEIPYTTSFTLAKQLSFYKIRTI 602
Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSY 280
G T + RG + T G N GQLG G+ R + PL V++++ G +
Sbjct: 603 APGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGK-QVIRVSCGDEF 661
Query: 281 MLAVTGNGVVYSFGSGSN 298
+A T + ++++G+G N
Sbjct: 662 TIAATDDNHIFAWGNGGN 679
>RGD|1307187 [details] [associations]
symbol:Nek9 "NIMA-related kinase 9" species:10116 "Rattus
norvegicus" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0019901 "protein kinase binding"
evidence=ISO] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 RGD:1307187 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PROSITE:PS50012 OMA:GCDGTFL OrthoDB:EOG4NZTSM IPI:IPI00870835
Ensembl:ENSRNOT00000009300 UCSC:RGD:1307187 ArrayExpress:D4A4B2
Uniprot:D4A4B2
Length = 975
Score = 157 (60.3 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 64/239 (26%), Positives = 107/239 (44%)
Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
R T+ + +V + +S V G G T Q + + S QV A H A V
Sbjct: 328 RSSTVTEAPIAVVTSRTSEVYVWGGGKSTPQKLDVIK----SGCSARQVCAGNTHFAVVT 383
Query: 180 QSGQVFTC-----GDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFLTI 233
+++T G GH D + +R P+ VE L+G QV+ G +FT +T
Sbjct: 384 VEKELYTWVNMQGGTKLHGQLGHGD--KASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTD 441
Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEE----VGSVVQIAAGPSYMLAVTGNG 288
G ++ GS+ +G +G +D+ + P+ + P++ V Q++ G ++++ +T N
Sbjct: 442 EGQLYAFGSDYYGCMG----VDKVSGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNK 497
Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSLC 347
VYS+G G LG + D P+ + K + +V V G + L SG V C
Sbjct: 498 EVYSWGCGEYGRLGLDSEEDYYTPQRVDV--PKALIIVAVQCGCDGTFLLTQSGKVLAC 554
Score = 150 (57.9 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 57/264 (21%), Positives = 106/264 (40%)
Query: 98 QSVEHSSDIVETSAGNMQITTGRYHTLLIS-NSSVFSC-----GSSLCGVLGHGPETT-- 149
+S D++++ Q+ G H +++ +++ G+ L G LGHG + +
Sbjct: 354 KSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYR 413
Query: 150 QCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRP-IFRPR 208
Q ++ A H QVS ++ V GQ++ G + C G + P + P
Sbjct: 414 QPKHVEKLQ-GKAIH--QVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGPEVLEPM 470
Query: 209 LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEE 267
+ P +QV+ G N LT V++ G +G+LG D TP+ + P
Sbjct: 471 QLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKAL 530
Query: 268 VGSVVQIAAGPSYMLAVTGNGVVYSFGS----GSNFCLG----HGEQHDELQPRAIQTFR 319
+ VQ +++L +G + G N C+ H H+ + +
Sbjct: 531 IIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAK 590
Query: 320 RKGIHVVR-VSAGDEHVVALDSSG 342
+ + +R ++ G H A+D G
Sbjct: 591 QLSFYKIRTIAPGKTHTAAIDERG 614
Score = 144 (55.7 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 60/247 (24%), Positives = 104/247 (42%)
Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLG----HGPETTQCVSFTRINFPSAAHVVQVS 169
Q++ G T+ +++ +++ GS G +G GPE + + ++NF + V QVS
Sbjct: 428 QVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGPEVLEPM---QLNFFLSNPVEQVS 484
Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
+NH + ++ +V++ G G D+ + P+ V+ K + V G + T
Sbjct: 485 CGDNHVVVLTRNKEVYSWGCGEYGRLG-LDSEEDYYTPQRVDVPKALIIVAVQCGCDGTF 543
Query: 230 FLTIRGHVHTCGSNTHGQLG----------HGDTLDRPTPKSIAPLEEVG--SVVQIAAG 277
LT G V CG N +LG H + P S +++ + IA G
Sbjct: 544 LLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPG 603
Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
++ A+ G + +FG LG G L + G V+RVS GDE +A
Sbjct: 604 KTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGG-PLGGKQVIRVSCGDEFTIA 662
Query: 338 LDSSGYV 344
++
Sbjct: 663 ATDDNHI 669
Score = 128 (50.1 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 50/198 (25%), Positives = 83/198 (41%)
Query: 115 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
Q++ G H ++++ N V+S G G LG E R++ P A +V V +
Sbjct: 482 QVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTP-QRVDVPKALIIVAVQCGCD 540
Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDT-----NRPIFR--P-----RLVEALKGVPCKQV 221
+ QSG+V CG N G N + P L + L + +
Sbjct: 541 GTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTI 600
Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSY 280
G T + RG + T G N GQLG G+ R + PL V++++ G +
Sbjct: 601 APGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGK-QVIRVSCGDEF 659
Query: 281 MLAVTGNGVVYSFGSGSN 298
+A T + ++++G+G N
Sbjct: 660 TIAATDDNHIFAWGNGGN 677
>MGI|MGI:2387995 [details] [associations]
symbol:Nek9 "NIMA (never in mitosis gene a)-related
expressed kinase 9" species:10090 "Mus musculus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004672 "protein kinase
activity" evidence=IEA] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006468 "protein phosphorylation"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
[GO:0016310 "phosphorylation" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0016772 "transferase
activity, transferring phosphorus-containing groups" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=ISO] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220 MGI:MGI:2387995
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0019901 GO:GO:0051301 GO:GO:0007067
GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 EMBL:CH466590
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 KO:K08857
GeneTree:ENSGT00700000104074 CTD:91754 HOVERGEN:HBG039572
OMA:GCDGTFL OrthoDB:EOG4NZTSM EMBL:AJ489828 EMBL:BC024926
EMBL:BC117971 EMBL:BC117972 IPI:IPI00169806 RefSeq:NP_660120.2
UniGene:Mm.29071 ProteinModelPortal:Q8K1R7 SMR:Q8K1R7
DIP:DIP-56880N IntAct:Q8K1R7 STRING:Q8K1R7 PhosphoSite:Q8K1R7
PaxDb:Q8K1R7 PRIDE:Q8K1R7 Ensembl:ENSMUST00000040992 GeneID:217718
KEGG:mmu:217718 InParanoid:Q148U2 NextBio:375996 Bgee:Q8K1R7
Genevestigator:Q8K1R7 GermOnline:ENSMUSG00000034290 Uniprot:Q8K1R7
Length = 984
Score = 157 (60.3 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 64/239 (26%), Positives = 107/239 (44%)
Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
R T+ + +V + +S V G G T Q + + S QV A H A V
Sbjct: 330 RSSTVTEAPIAVVTSRTSEVYVWGGGKSTPQKLDVIK----SGCSARQVCAGNTHFAVVT 385
Query: 180 QSGQVFTC-----GDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFLTI 233
+++T G GH D + +R P+ VE L+G QV+ G +FT +T
Sbjct: 386 VEKELYTWVNMQGGTKLHGQLGHGD--KASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTD 443
Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEE----VGSVVQIAAGPSYMLAVTGNG 288
G ++ GS+ +G +G +D+ + P+ + P++ V Q++ G ++++ +T N
Sbjct: 444 EGQLYAFGSDYYGCMG----VDKVSGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNK 499
Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSLC 347
VYS+G G LG + D P+ + K + +V V G + L SG V C
Sbjct: 500 EVYSWGCGEYGRLGLDSEEDYYTPQRVDV--PKALIIVAVQCGCDGTFLLTQSGKVLAC 556
Score = 150 (57.9 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 57/264 (21%), Positives = 106/264 (40%)
Query: 98 QSVEHSSDIVETSAGNMQITTGRYHTLLIS-NSSVFSC-----GSSLCGVLGHGPETT-- 149
+S D++++ Q+ G H +++ +++ G+ L G LGHG + +
Sbjct: 356 KSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYR 415
Query: 150 QCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRP-IFRPR 208
Q ++ A H QVS ++ V GQ++ G + C G + P + P
Sbjct: 416 QPKHVEKLQ-GKAIH--QVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGPEVLEPM 472
Query: 209 LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEE 267
+ P +QV+ G N LT V++ G +G+LG D TP+ + P
Sbjct: 473 QLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKAL 532
Query: 268 VGSVVQIAAGPSYMLAVTGNGVVYSFGS----GSNFCLG----HGEQHDELQPRAIQTFR 319
+ VQ +++L +G + G N C+ H H+ + +
Sbjct: 533 IIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAK 592
Query: 320 RKGIHVVR-VSAGDEHVVALDSSG 342
+ + +R ++ G H A+D G
Sbjct: 593 QLSFYKIRTIAPGKTHTAAIDERG 616
Score = 144 (55.7 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 60/247 (24%), Positives = 104/247 (42%)
Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLG----HGPETTQCVSFTRINFPSAAHVVQVS 169
Q++ G T+ +++ +++ GS G +G GPE + + ++NF + V QVS
Sbjct: 430 QVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGPEVLEPM---QLNFFLSNPVEQVS 486
Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
+NH + ++ +V++ G G D+ + P+ V+ K + V G + T
Sbjct: 487 CGDNHVVVLTRNKEVYSWGCGEYGRLG-LDSEEDYYTPQRVDVPKALIIVAVQCGCDGTF 545
Query: 230 FLTIRGHVHTCGSNTHGQLG----------HGDTLDRPTPKSIAPLEEVG--SVVQIAAG 277
LT G V CG N +LG H + P S +++ + IA G
Sbjct: 546 LLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPG 605
Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
++ A+ G + +FG LG G L + G V+RVS GDE +A
Sbjct: 606 KTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGG-PLGGKQVIRVSCGDEFTIA 664
Query: 338 LDSSGYV 344
++
Sbjct: 665 ATDDNHI 671
Score = 128 (50.1 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 50/198 (25%), Positives = 83/198 (41%)
Query: 115 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
Q++ G H ++++ N V+S G G LG E R++ P A +V V +
Sbjct: 484 QVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTP-QRVDVPKALIIVAVQCGCD 542
Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDT-----NRPIFR--P-----RLVEALKGVPCKQV 221
+ QSG+V CG N G N + P L + L + +
Sbjct: 543 GTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTI 602
Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSY 280
G T + RG + T G N GQLG G+ R + PL V++++ G +
Sbjct: 603 APGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGK-QVIRVSCGDEF 661
Query: 281 MLAVTGNGVVYSFGSGSN 298
+A T + ++++G+G N
Sbjct: 662 TIAATDDNHIFAWGNGGN 679
>FB|FBgn0030600 [details] [associations]
symbol:hiw "highwire" species:7227 "Drosophila melanogaster"
[GO:0008582 "regulation of synaptic growth at neuromuscular
junction" evidence=IMP;TAS] [GO:0016023 "cytoplasmic
membrane-bounded vesicle" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0007628 "adult walking behavior"
evidence=NAS] [GO:0040011 "locomotion" evidence=NAS] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0030514 "negative regulation
of BMP signaling pathway" evidence=IGI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0045886 "negative regulation of synaptic
growth at neuromuscular junction" evidence=IMP] [GO:0030509 "BMP
signaling pathway" evidence=IPI] [GO:0016567 "protein
ubiquitination" evidence=ISS] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] [GO:0006914 "autophagy" evidence=IDA]
[GO:0050808 "synapse organization" evidence=IDA] InterPro:IPR001841
InterPro:IPR027047 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415 Prosite:PS00518
GO:GO:0005886 GO:GO:0005634 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0046872 EMBL:AE014298 GO:GO:0008270 GO:GO:0006914
GO:GO:0040011 GO:GO:0050808 GO:GO:0006351 GO:GO:0016023
GO:GO:0045886 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0030509 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
GO:GO:0007628 eggNOG:COG5184 GO:GO:0030514 InterPro:IPR012983
Pfam:PF08005 InterPro:IPR017868 PROSITE:PS50194 EMBL:AF262977
EMBL:AY113376 RefSeq:NP_511159.3 UniGene:Dm.3259
ProteinModelPortal:Q9NB71 SMR:Q9NB71 IntAct:Q9NB71 STRING:Q9NB71
EnsemblMetazoa:FBtr0073970 GeneID:32429 KEGG:dme:Dmel_CG32592
UCSC:CG32592-RA CTD:32429 FlyBase:FBgn0030600
GeneTree:ENSGT00390000011403 InParanoid:Q9NB71 KO:K10693
OMA:DAQCQEY OrthoDB:EOG4ZPC91 PhylomeDB:Q9NB71 ChiTaRS:hiw
GenomeRNAi:32429 NextBio:778423 Bgee:Q9NB71 GermOnline:CG32592
PANTHER:PTHR12846 Uniprot:Q9NB71
Length = 5233
Score = 164 (62.8 bits), Expect = 5.8e-08, P = 5.8e-08
Identities = 38/106 (35%), Positives = 60/106 (56%)
Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
P+L++ P QV GL+ T LT+ G V+T GSN +GQLG GD +P + ++
Sbjct: 957 PQLLQLTSSSPVVQVACGLHHTVVLTLAGEVYTFGSNQYGQLGSGDL--QPVSGPVR-VQ 1013
Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQP 312
G++ Q+AAG ++ + +T G+VY+FG+ LG L+P
Sbjct: 1014 VPGAISQVAAGSNHTVLLTSKGMVYTFGNYQKGQLGRLPSDYGLKP 1059
>TAIR|locus:2035423 [details] [associations]
symbol:AT1G19880 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002684
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 OMA:FGENKLG
IPI:IPI00543359 RefSeq:NP_173417.2 UniGene:At.16200
ProteinModelPortal:F4HQZ1 SMR:F4HQZ1 PRIDE:F4HQZ1
EnsemblPlants:AT1G19880.1 GeneID:838576 KEGG:ath:AT1G19880
Uniprot:F4HQZ1
Length = 538
Score = 153 (58.9 bits), Expect = 6.3e-08, P = 6.3e-08
Identities = 45/119 (37%), Positives = 62/119 (52%)
Query: 221 VTAGLNFTGFL--TIRGHVHTCGSNTHGQLGHG--------DTLDR------PTPKSIAP 264
V G +FT +L T + T G +GQLGHG D+ R P PK+IA
Sbjct: 172 VACGADFTVWLSSTEGASILTAGLPQYGQLGHGTDNEFNMKDSSVRLAYEAQPRPKAIAS 231
Query: 265 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 323
L ++V++A G ++ +AV NG VY++G G LGH EQ DE PR I F+R +
Sbjct: 232 LAGE-TIVKVACGTNHTVAVDKNGYVYTWGFGGYGRLGHREQKDEWAPRRIDVFQRNNV 289
Score = 124 (48.7 bits), Expect = 0.00011, P = 0.00011
Identities = 45/174 (25%), Positives = 75/174 (43%)
Query: 180 QSGQVFTCGDNSSFCCGHRD--TNRPIFRPRLVEALKGVPCKQVTAGL-NFTGF-LTIRG 235
+ G++ CG + G R + P + L GV + V G +F L + G
Sbjct: 18 KGGELLFCGATAWDIIGKRKGAMEGNLVSPTRLRPLVGVNIRFVATGCASFHCVALDVEG 77
Query: 236 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
+T G N GQLGHGD + R P ++ L + +V+ AAG ++ + V+ +G FG
Sbjct: 78 RCYTWGRNEKGQLGHGDMIQRDRPTVVSGLSK-HKIVKAAAGRNHTVVVSDDGQSLGFGW 136
Query: 296 GSNFCLGHGEQHDELQPRAIQTFRRKGI---HVVRVSAGDEHVVALDSSGYVSL 346
LG G + +++ + V V+ G + V L S+ S+
Sbjct: 137 NKYGQLGLGSAKNGFVSVEVESTPLPCVVSDEVTNVACGADFTVWLSSTEGASI 190
>TAIR|locus:2099986 [details] [associations]
symbol:AT3G55580 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] INTERPRO:IPR000408 Pfam:PF00415
EMBL:CP002686 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:AL132975
HSSP:P18754 IPI:IPI00521720 PIR:T47697 RefSeq:NP_191117.1
UniGene:At.35013 ProteinModelPortal:Q9M2S1 SMR:Q9M2S1 PRIDE:Q9M2S1
EnsemblPlants:AT3G55580.1 GeneID:824723 KEGG:ath:AT3G55580
TAIR:At3g55580 InParanoid:Q9M2S1 OMA:HPIPCIE PhylomeDB:Q9M2S1
ProtClustDB:CLSN2685056 Genevestigator:Q9M2S1 Uniprot:Q9M2S1
Length = 488
Score = 151 (58.2 bits), Expect = 8.9e-08, P = 8.9e-08
Identities = 51/178 (28%), Positives = 80/178 (44%)
Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
++V +++ H+A + +G + T G CG T+ + P V +L G+ ++V
Sbjct: 311 SYVKKIACGGRHSAVITDTGALLTFGWGLYGQCGQGSTDDEL-SPTCVSSLLGIRIEEVA 369
Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-AP-LEEVGSVVQIAAGPSY 280
AGL T + G V+ G N GQLG G PK + AP LE V +V I+ G +
Sbjct: 370 AGLWHTTCASSDGDVYAFGGNQFGQLGTGCDQAETLPKLLEAPNLENV-NVKTISCGARH 428
Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
+T G V+ +G LG G+ D P + R K ++ G H + L
Sbjct: 429 TAVITDEGRVFCWGWNKYGQLGIGDVIDRNAPAEV---RIKDCFPKNIACGWWHTLLL 483
Score = 139 (54.0 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 41/146 (28%), Positives = 65/146 (44%)
Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
GR+ ++ ++ + G L G G G T +S T ++ + +V+A H
Sbjct: 320 GRHSAVITDTGALLTFGWGLYGQCGQG-STDDELSPTCVSSLLGIRIEEVAAGLWHTTCA 378
Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA--LKGVPCKQVTAGLNFTGFLTIRGH 236
G V+ G N G ++ P+L+EA L+ V K ++ G T +T G
Sbjct: 379 SSDGDVYAFGGNQFGQLG-TGCDQAETLPKLLEAPNLENVNVKTISCGARHTAVITDEGR 437
Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSI 262
V G N +GQLG GD +DR P +
Sbjct: 438 VFCWGWNKYGQLGIGDVIDRNAPAEV 463
Score = 134 (52.2 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 35/127 (27%), Positives = 61/127 (48%)
Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
K++ G + +T G + T G +GQ G G T D +P ++ L + + ++AAG
Sbjct: 314 KKIACGGRHSAVITDTGALLTFGWGLYGQCGQGSTDDELSPTCVSSLLGI-RIEEVAAGL 372
Query: 279 SYMLAVTGNGVVYSFGSGSNFC-LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
+ + +G VY+FG G+ F LG G E P+ ++ + ++V +S G H
Sbjct: 373 WHTTCASSDGDVYAFG-GNQFGQLGTGCDQAETLPKLLEAPNLENVNVKTISCGARHTAV 431
Query: 338 LDSSGYV 344
+ G V
Sbjct: 432 ITDEGRV 438
Score = 38 (18.4 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 15/62 (24%), Positives = 23/62 (37%)
Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
++ +V V+A H + GQV+ G G R RLV + +
Sbjct: 228 VSLAPGVRIVSVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS------RVRLVSSPHPI 281
Query: 217 PC 218
PC
Sbjct: 282 PC 283
>UNIPROTKB|J9NZT9 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 EMBL:AAEX03016754 EMBL:AAEX03016753
Ensembl:ENSCAFT00000045241 Uniprot:J9NZT9
Length = 865
Score = 154 (59.3 bits), Expect = 9.7e-08, P = 9.7e-08
Identities = 39/111 (35%), Positives = 58/111 (52%)
Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
G V G N GQLG D DR +P + L VV I+ G + +T +G V++FG
Sbjct: 24 GAVFGWGMNNAGQLGLSDEEDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVFTFG 82
Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYV 344
+GS LGH +DE+ PR + G V +++ G +H +A + SSG +
Sbjct: 83 AGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLI 131
Score = 144 (55.7 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 53/166 (31%), Positives = 76/166 (45%)
Query: 182 GQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
G VF G N++ G D +R P V+ L+ ++ G T LT G V T
Sbjct: 24 GAVFGWGMNNAGQLGLSDEEDRE--SPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 81
Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGNGVVYSFGSGSN 298
G+ + GQLGH D P+ + LE +GS V QIA G + LA V +G++Y+FG G+
Sbjct: 82 GAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAK 139
Query: 299 FCLGHGEQHDELQPRAIQTF--RRKGIHVVRVSAGDEHVVALDSSG 342
LG G + P ++ + G R H+V SG
Sbjct: 140 GQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSG 185
Score = 139 (54.0 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 42/137 (30%), Positives = 57/137 (41%)
Query: 127 SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 186
+ +VF G + G LG E + S + VV +S E H A + +SG VFT
Sbjct: 22 AEGAVFGWGMNNAGQLGLSDEEDR-ESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFT 80
Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFLTIRGHVHTCGSNTH 245
G S GH N + PR V L G Q+ G T F+ G ++ G
Sbjct: 81 FGAGSCGQLGHDSMNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAK 139
Query: 246 GQLGHGDTLDRPTPKSI 262
GQLG G T + P +
Sbjct: 140 GQLGTGHTCNVKCPSPV 156
>MGI|MGI:2137600 [details] [associations]
symbol:Wbscr16 "Williams-Beuren syndrome chromosome region
16 homolog (human)" species:10090 "Mus musculus" [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=NAS]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0050790 "regulation
of catalytic activity" evidence=NAS] MGI:MGI:2137600
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GeneTree:ENSGT00700000104312 CTD:81554 HOGENOM:HOG000232125
HOVERGEN:HBG054246 OMA:MVTLAKS OrthoDB:EOG4F1X33 EMBL:AK017733
EMBL:BC024714 EMBL:BC055335 IPI:IPI00111460 RefSeq:NP_291050.1
UniGene:Mm.29508 ProteinModelPortal:Q9CYF5 SMR:Q9CYF5 STRING:Q9CYF5
PhosphoSite:Q9CYF5 PRIDE:Q9CYF5 Ensembl:ENSMUST00000076228
GeneID:94254 KEGG:mmu:94254 InParanoid:Q9CYF5 NextBio:352275
Bgee:Q9CYF5 Genevestigator:Q9CYF5 GermOnline:ENSMUSG00000061979
Uniprot:Q9CYF5
Length = 461
Score = 150 (57.9 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 52/190 (27%), Positives = 85/190 (44%)
Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPC 218
P V+QVS H+ + VF+ G+NS CG + ++ V ++
Sbjct: 168 PQETKVLQVSCGRAHSLVLTDREGVFSMGNNSHGQCGRKVVEDEVYSESHKVHRMQDFDG 227
Query: 219 K--QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIA 275
+ QV G + + FLT +G V++CG GQ G G TP + L V +VVQ+A
Sbjct: 228 QVVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSTPSKLGGDLAGV-TVVQVA 286
Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEH 334
LA++ +G V+ +G+ L ++ PR + F G V +V+ G
Sbjct: 287 TYGDCCLALSADGGVFGWGNSEYLQLASVTDSTQVNVPRCLP-FSGVG-KVKQVACGGTG 344
Query: 335 VVALDSSGYV 344
L++ G+V
Sbjct: 345 CAVLNAEGHV 354
Score = 143 (55.4 bits), Expect = 6.4e-07, P = 6.4e-07
Identities = 64/238 (26%), Positives = 96/238 (40%)
Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
+Q+ G+ H+L +++ V+SCG G G G + VVQV+
Sbjct: 230 VQVVCGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSTPSKLGGDLAGVTVVQVATYG 289
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV-PCKQVTAGLNFTGFL 231
+ + G VF G++ + + PR + GV KQV G L
Sbjct: 290 DCCLALSADGGVFGWGNSEYLQLASVTDSTQVNVPRCLP-FSGVGKVKQVACGGTGCAVL 348
Query: 232 TIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAP----LEEVGSVVQIA---AGPSYMLA 283
GHV G +G LG G L + P+ I P L E VQ++ G S+ A
Sbjct: 349 NAEGHVFVWG---YGILGKGPKLLETAIPEMIPPTLFGLTEFNPEVQVSQIRCGLSHFAA 405
Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
+T G ++ +G CLG G D+ P + G V V+ G +H+V L S
Sbjct: 406 LTNKGELFVWGKNIRGCLGIGRLEDQYFPWRVTM---PG-EPVDVACGVDHMVTLAKS 459
Score = 138 (53.6 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 64/244 (26%), Positives = 108/244 (44%)
Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFT-RINFPSA--AHVVQVS 169
+Q++ GR H+L++++ VFS G++ G G + S + +++ VVQV
Sbjct: 174 LQVSCGRAHSLVLTDREGVFSMGNNSHGQCGRKVVEDEVYSESHKVHRMQDFDGQVVQVV 233
Query: 170 ASENHAAFVLQSGQVFTCG--DNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLN 226
++H+ F+ G+V++CG + GH + T+ P +L L GV QV +
Sbjct: 234 CGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSTP---SKLGGDLAGVTVVQVATYGD 290
Query: 227 FTGFLTIRGHVHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
L+ G V G++ + QL D+ P+ + P VG V Q+A G + +
Sbjct: 291 CCLALSADGGVFGWGNSEYLQLASVTDSTQVNVPRCL-PFSGVGKVKQVACGGTGCAVLN 349
Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQ------TFRRKGIHVVRVSAGDEHVVAL 338
G V+ +G G LG G + E P I T + V ++ G H AL
Sbjct: 350 AEGHVFVWGYG---ILGKGPKLLETAIPEMIPPTLFGLTEFNPEVQVSQIRCGLSHFAAL 406
Query: 339 DSSG 342
+ G
Sbjct: 407 TNKG 410
>UNIPROTKB|C9JRH2 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0031965 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341 OrthoDB:EOG4320Z9
IPI:IPI00927389 ProteinModelPortal:C9JRH2 SMR:C9JRH2 STRING:C9JRH2
Ensembl:ENST00000427469 ArrayExpress:C9JRH2 Bgee:C9JRH2
Uniprot:C9JRH2
Length = 230
Score = 142 (55.0 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 55/178 (30%), Positives = 85/178 (47%)
Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
V + G G LG G + ++ P VVQ A H + +SGQV++ G N
Sbjct: 37 VLTLGQGDVGQLGLGENVMERKKPALVSIPE--DVVQAEAGGMHTVCLSKSGQVYSFGCN 94
Query: 191 SSFCCGHRDTN--RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS--NTHG 246
G RDT+ P VE + V QV+AG + T LT G V GS + +G
Sbjct: 95 DEGALG-RDTSVEGSEMVPGKVELQEKVV--QVSAGDSHTAALTDDGRVFLWGSFRDNNG 151
Query: 247 QLGHGDTLDRPTPKSIAPLE-EVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
+G L P KS+ P++ ++ VV++A+G +++ +T +G +Y+ G G LG
Sbjct: 152 VIG----LLEPMKKSMVPVQVQLDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLG 205
Score = 131 (51.2 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 41/115 (35%), Positives = 58/115 (50%)
Query: 235 GHVHTCGSNTHGQLGHGDT-LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
G V T G GQLG G+ ++R P ++ E+V VQ AG + + ++ +G VYSF
Sbjct: 35 GLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDV---VQAEAGGMHTVCLSKSGQVYSF 91
Query: 294 GSGSNFCLGHGE--QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSL 346
G LG + E+ P ++ + K VV+VSAGD H AL G V L
Sbjct: 92 GCNDEGALGRDTSVEGSEMVPGKVE-LQEK---VVQVSAGDSHTAALTDDGRVFL 142
Score = 128 (50.1 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 50/175 (28%), Positives = 83/175 (47%)
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
+H + + G V T G G + +P LV + V Q AG T L+
Sbjct: 26 SHRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDVV--QAEAGGMHTVCLS 83
Query: 233 IRGHVHTCGSNTHGQLGHGDTLD--RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
G V++ G N G LG +++ P + L+E VVQ++AG S+ A+T +G V
Sbjct: 84 KSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVE-LQE--KVVQVSAGDSHTAALTDDGRV 140
Query: 291 YSFGS--GSNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
+ +GS +N +G E + P +Q + VV+V++G++H+V L + G
Sbjct: 141 FLWGSFRDNNGVIGLLEPMKKSMVPVQVQL----DVPVVKVASGNDHLVMLTADG 191
>WB|WBGene00004304 [details] [associations]
symbol:ran-3 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0051301 "cell division" evidence=IMP] [GO:0000910
"cytokinesis" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0016246 "RNA interference" evidence=IMP] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0009792 GO:GO:0040010
GO:GO:0007067 GO:GO:0007052 GO:GO:0002119 GO:GO:0016246
GO:GO:0000910 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005085 GO:GO:0040035 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184 EMBL:Z54327
GeneTree:ENSGT00700000104160 PIR:T19483 RefSeq:NP_495753.1
ProteinModelPortal:Q18211 SMR:Q18211 IntAct:Q18211 STRING:Q18211
PaxDb:Q18211 EnsemblMetazoa:C26D10.1.1 EnsemblMetazoa:C26D10.1.2
GeneID:174332 KEGG:cel:CELE_C26D10.1 UCSC:C26D10.1 CTD:174332
WormBase:C26D10.1 HOGENOM:HOG000016067 InParanoid:Q18211
OMA:TEPNDVE NextBio:883582 Uniprot:Q18211
Length = 569
Score = 151 (58.2 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 50/173 (28%), Positives = 84/173 (48%)
Query: 183 QVFTCGDNSSFCCGH--RDTNRPIFRPRLVEALK--GVPCKQVTAGLNFTGFLTIRGHVH 238
+V +CG+ + GH R T + +PR V+ + G+ Q AG + LT G V+
Sbjct: 153 RVLSCGEGEAL--GHPGRTTTK---KPRKVDIFEEEGLKPLQAVAGGVHSAVLTSEGEVY 207
Query: 239 TCGSNTHGQL---G---HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
CG N G + G G T + K +E+ G +V +AAG S+ A+T G V +
Sbjct: 208 MCGINEKGTVPAEGVEKEGSTDEFAKVKFEEDIEKEGKIVMLAAGASFTAALTDQGSVIA 267
Query: 293 FGSGSNFCLGHGEQHD---ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
+G+ N G+ + H ++Q + + +V+++AG+ H+V LD G
Sbjct: 268 WGNLRN-SNGNVDVHPLLHKMQEAPVVIVHQAKRKIVKIAAGENHLVMLDEKG 319
>UNIPROTKB|F1NAG9 [details] [associations]
symbol:NEK9 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0019901 "protein kinase binding"
evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 GeneTree:ENSGT00700000104074
OMA:GCDGTFL EMBL:AADN02003466 IPI:IPI00598995
Ensembl:ENSGALT00000016792 Uniprot:F1NAG9
Length = 984
Score = 153 (58.9 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 59/218 (27%), Positives = 96/218 (44%)
Query: 141 VLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC-----GDNSSFCC 195
V G G T Q + + S QV A H A V +++T G
Sbjct: 361 VWGGGKSTPQKLDAIK----SGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQL 416
Query: 196 GHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTL 254
GH D R +R P+ VE L+G +QV+ G +FT +T G ++ GS+ +G +G +
Sbjct: 417 GHGD--RASYRQPKHVEKLQGKAIRQVSCGDDFTVCITDEGQLYAFGSDYYGCIG----I 470
Query: 255 DRPTPKSIA-PLEE----VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE 309
D+ + PL+ V Q++ G +++ +T N VY++G G LG + D
Sbjct: 471 DKAYGSEVLEPLQLDFFLTNPVEQVSCGDNHVAVLTRNREVYTWGCGEYGRLGLDSEEDH 530
Query: 310 LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSLC 347
P+ + K +++V V G + L +G V C
Sbjct: 531 YTPQKVDV--PKTLNIVSVHCGCDGTFLLTQTGKVLAC 566
Score = 147 (56.8 bits), Expect = 6.8e-07, P = 6.8e-07
Identities = 60/247 (24%), Positives = 107/247 (43%)
Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLG----HGPETTQCVSFTRINFPSAAHVVQVS 169
Q++ G T+ I++ +++ GS G +G +G E + + +++F V QVS
Sbjct: 440 QVSCGDDFTVCITDEGQLYAFGSDYYGCIGIDKAYGSEVLEPL---QLDFFLTNPVEQVS 496
Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
+NH A + ++ +V+T G G D+ + P+ V+ K + V G + T
Sbjct: 497 CGDNHVAVLTRNREVYTWGCGEYGRLG-LDSEEDHYTPQKVDVPKTLNIVSVHCGCDGTF 555
Query: 230 FLTIRGHVHTCGSNTHGQLG----------HGDTLDRPTPKSIAPLEEVG--SVVQIAAG 277
LT G V CG N +LG H + P S+ +++ + I+ G
Sbjct: 556 LLTQTGKVLACGLNEFNKLGLNQCTSGIINHDTYCEVPYATSLTLAKQLSFYKIRTISPG 615
Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
++ ++ G + +FGS LG G+ L + G V+RVS GDE +A
Sbjct: 616 KTHTASIDERGRLLTFGSNKCGQLGVGDYKKHLGINLLAG-PLGGKQVIRVSCGDEFTIA 674
Query: 338 LDSSGYV 344
++
Sbjct: 675 ATDDNHI 681
Score = 140 (54.3 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 57/263 (21%), Positives = 103/263 (39%)
Query: 98 QSVEHSSDIVETSAGNMQITTGRYHTLLIS-NSSVFSC-----GSSLCGVLGHGPETTQC 151
+S D +++ Q+ G H +++ +++ G+ L G LGHG +
Sbjct: 366 KSTPQKLDAIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDRASYR 425
Query: 152 VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCG-HRDTNRPIFRPRLV 210
+ + QVS ++ + GQ++ G + C G + + P +
Sbjct: 426 QP-KHVEKLQGKAIRQVSCGDDFTVCITDEGQLYAFGSDYYGCIGIDKAYGSEVLEPLQL 484
Query: 211 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 270
+ P +QV+ G N LT V+T G +G+LG D TP+ + + + +
Sbjct: 485 DFFLTNPVEQVSCGDNHVAVLTRNREVYTWGCGEYGRLGLDSEEDHYTPQKV-DVPKTLN 543
Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGS------GSNFCLGHGEQHDEL--QPRAIQ-TFRRK 321
+V + G +T G V + G G N C HD P A T ++
Sbjct: 544 IVSVHCGCDGTFLLTQTGKVLACGLNEFNKLGLNQCTSGIINHDTYCEVPYATSLTLAKQ 603
Query: 322 -GIHVVR-VSAGDEHVVALDSSG 342
+ +R +S G H ++D G
Sbjct: 604 LSFYKIRTISPGKTHTASIDERG 626
Score = 130 (50.8 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 49/198 (24%), Positives = 87/198 (43%)
Query: 115 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
Q++ G H +++ N V++ G G LG E +++ P ++V V +
Sbjct: 494 QVSCGDNHVAVLTRNREVYTWGCGEYGRLGLDSEEDHYTP-QKVDVPKTLNIVSVHCGCD 552
Query: 174 HAAFVLQSGQVFTCGDNS------SFCCG---HRDTNRPI-FRPRLVEA--LKGVPCKQV 221
+ Q+G+V CG N + C + DT + + L A L + +
Sbjct: 553 GTFLLTQTGKVLACGLNEFNKLGLNQCTSGIINHDTYCEVPYATSLTLAKQLSFYKIRTI 612
Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSY 280
+ G T + RG + T GSN GQLG GD +A PL V++++ G +
Sbjct: 613 SPGKTHTASIDERGRLLTFGSNKCGQLGVGDYKKHLGINLLAGPLGGK-QVIRVSCGDEF 671
Query: 281 MLAVTGNGVVYSFGSGSN 298
+A T + ++++G+G N
Sbjct: 672 TIAATDDNHIFAWGNGGN 689
>UNIPROTKB|I3L5B6 [details] [associations]
symbol:LOC100737658 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA]
InterPro:IPR000719 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104137 Ensembl:ENSSSCT00000029356 OMA:PEREMAM
Uniprot:I3L5B6
Length = 680
Score = 151 (58.2 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 45/155 (29%), Positives = 76/155 (49%)
Query: 190 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ-VTAGLNFTGFLTIRGHVHTCGSNTHGQL 248
+S+ C G + P+ +V+ G K VT L + G+ G L
Sbjct: 305 SSARCRGKSEGXLPMLNTEVVQVAAGRTQKAGVTRCLPLPAPSPVPSQAPPLGAGG-GAL 363
Query: 249 GHGDTLDRPTPKSIAP-LE-EVGSVVQ-IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
G +++P P+ ++ LE + G ++ +A G + +T G++ +FGSGSN CLGHG
Sbjct: 364 LPG-AIEQPQPQFVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGS 422
Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
+D QP ++ G +V+V+ G HV+AL +
Sbjct: 423 LNDISQPTIVEALL--GYEMVQVACGASHVLALST 455
Score = 142 (55.0 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 63/263 (23%), Positives = 106/263 (40%)
Query: 93 VLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCV 152
V RFL+ + I + G++ + L + + GS G LGHG
Sbjct: 376 VSRFLEG-QSGVTIKHVACGDL------FTACLTDRGIIMTFGSGSNGCLGHG-SLNDIS 427
Query: 153 SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG--DNSSFCCGHRDTNRPIFRPRLV 210
T + +VQV+ +H + ++F G D G R+++ P+LV
Sbjct: 428 QPTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDGGRLGLGTRESH---CCPQLV 484
Query: 211 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTL---DRPTPKSIAPLEE 267
G ++V G++ + LT+ G CGSN +LG D L + P P +EE
Sbjct: 485 PMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGL-DPLSLGEEPAPHQ--QVEE 541
Query: 268 VGSVVQIAAGP---SYMLAV---TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 321
+ + + P +L+V T + + SG + G + P +Q +
Sbjct: 542 AVTFTPLGSAPLDQEPLLSVDLGTAHSAAVTXASGDCYTFGSNARRVSRAPCRVQGLQ-- 599
Query: 322 GIHVVRVSAGDEHVVALDSSGYV 344
GI + V+ GD VA+ + G V
Sbjct: 600 GIKISTVACGDAFTVAIGAEGEV 622
>UNIPROTKB|Q92834 [details] [associations]
symbol:RPGR "X-linked retinitis pigmentosa GTPase
regulator" species:9606 "Homo sapiens" [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0050896 "response to stimulus" evidence=IEA] [GO:0035085
"cilium axoneme" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007601 "visual perception" evidence=IMP] [GO:0001750
"photoreceptor outer segment" evidence=IDA] [GO:0005813
"centrosome" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0042073 "intraflagellar transport" evidence=ISS]
[GO:0036064 "cilium basal body" evidence=ISS] [GO:0036126 "sperm
flagellum" evidence=ISS] [GO:0006886 "intracellular protein
transport" evidence=TAS] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005794 GO:GO:0005813 GO:GO:0006886 GO:GO:0007601
Orphanet:1872 Orphanet:791 GO:GO:0050896 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085 GO:GO:0042384
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:CH471141 GO:GO:0042073 GO:GO:0001750 eggNOG:COG5184
Orphanet:244 GO:GO:0036064 Orphanet:49382 GO:GO:0036126
EMBL:AL606748 CTD:6103 HOVERGEN:HBG026899 EMBL:U57629 EMBL:X97668
EMBL:AJ238395 EMBL:AJ318463 EMBL:BC031624 EMBL:AF286471
EMBL:BK005711 IPI:IPI00023757 IPI:IPI00215806 IPI:IPI00215807
IPI:IPI00215808 IPI:IPI00382445 IPI:IPI00397031 RefSeq:NP_000319.1
RefSeq:NP_001030025.1 UniGene:Hs.61438 ProteinModelPortal:Q92834
SMR:Q92834 STRING:Q92834 PhosphoSite:Q92834 DMDM:23503098
PaxDb:Q92834 PRIDE:Q92834 DNASU:6103 Ensembl:ENST00000309513
Ensembl:ENST00000318842 Ensembl:ENST00000338898
Ensembl:ENST00000339363 Ensembl:ENST00000342811
Ensembl:ENST00000378505 Ensembl:ENST00000474584
Ensembl:ENST00000482855 GeneID:6103 KEGG:hsa:6103 UCSC:uc004deb.3
GeneCards:GC0XM038128 HGNC:HGNC:10295 HPA:HPA001593 MIM:300029
MIM:300455 MIM:300834 MIM:304020 MIM:312610 neXtProt:NX_Q92834
Orphanet:247522 PharmGKB:PA34656 OMA:NNVLPHY PhylomeDB:Q92834
ChiTaRS:RPGR GenomeRNAi:6103 NextBio:23741 ArrayExpress:Q92834
Bgee:Q92834 CleanEx:HS_RPGR Genevestigator:Q92834
GermOnline:ENSG00000156313 Uniprot:Q92834
Length = 1020
Score = 153 (58.9 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 52/181 (28%), Positives = 81/181 (44%)
Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
V +S + H+A V + +++ G N+ G + I +P V+ALK K G
Sbjct: 38 VHLSCGDEHSAVVTGNNKLYMFGSNNWGQLG-LGSKSAISKPTCVKALKPEKVKLAACGR 96
Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
N T T G+V+ G N GQLG GDT +R T I+ + Q++AG + A+T
Sbjct: 97 NHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALT 156
Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH--VVALDSSGY 343
+G ++ +G S +G + P+ + G V +S G H V D Y
Sbjct: 157 EDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTI----GKPVSWISCGYYHSAFVTTDGELY 212
Query: 344 V 344
V
Sbjct: 213 V 213
Score = 153 (58.9 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 59/231 (25%), Positives = 100/231 (43%)
Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
+ ++ G H+ +++ N+ ++ GS+ G LG G ++ T + V +
Sbjct: 38 VHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKP-TCVKALKPEKVKLAACGR 96
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGV-PCKQVTAGLNFTGF 230
NH + G V+ G N+ G DT R F ++ KQ++AG N +
Sbjct: 97 NHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFH--VISFFTSEHKIKQLSAGSNTSAA 154
Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNGV 289
LT G + G N+ GQ+G + + P+ + +G V I+ G + VT +G
Sbjct: 155 LTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVT----IGKPVSWISCGYYHSAFVTTDGE 210
Query: 290 VYSFGSGSNFCLGHGEQ--HDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
+Y FG N LG Q + P+ + K V++V+ G EH V L
Sbjct: 211 LYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEK---VIQVACGGEHTVVL 258
Score = 141 (54.7 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 75/276 (27%), Positives = 121/276 (43%)
Query: 69 SIYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLIS 127
++YA G + Q+ L + N V+ F S EH I + SAG+ T L
Sbjct: 107 NVYATGGNNEGQLGLGDTEERNTFHVISFFTS-EHK--IKQLSAGS---NTS---AALTE 157
Query: 128 NSSVFSCGSSLCGVLGHGPETTQCV-SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 186
+ +F G + G +G + CV I P V +S H+AFV G+++
Sbjct: 158 DGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKP----VSWISCGYYHSAFVTTDGELYV 213
Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK--QVTAGLNFTGFLTIRGHVHTCGSNT 244
G+ + G N+ + R + + +P K QV G T LT V+T G
Sbjct: 214 FGEPENGKLGL--PNQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVLT-ENAVYTFGLGQ 270
Query: 245 HGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 303
GQLG G L + PK I + + ++ I+ G ++ +T G++Y+FG G + LG
Sbjct: 271 FGQLGLGTFLFETSEPKVIENIRDQ-TISYISCGENHTALITDIGLMYTFGDGRHGKLGL 329
Query: 304 GEQH--DELQPRAIQTFRRKGIHVVR-VSAGDEHVV 336
G ++ + P F R +V+ V+ G H+V
Sbjct: 330 GLENFTNHFIPTLCSNFLR---FIVKLVACGGCHMV 362
>UNIPROTKB|C9JMJ4 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0031965 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341 IPI:IPI00925317
ProteinModelPortal:C9JMJ4 SMR:C9JMJ4 STRING:C9JMJ4
Ensembl:ENST00000419074 ArrayExpress:C9JMJ4 Bgee:C9JMJ4
Uniprot:C9JMJ4
Length = 272
Score = 142 (55.0 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 55/178 (30%), Positives = 85/178 (47%)
Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
V + G G LG G + ++ P VVQ A H + +SGQV++ G N
Sbjct: 37 VLTLGQGDVGQLGLGENVMERKKPALVSIPE--DVVQAEAGGMHTVCLSKSGQVYSFGCN 94
Query: 191 SSFCCGHRDTN--RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS--NTHG 246
G RDT+ P VE + V QV+AG + T LT G V GS + +G
Sbjct: 95 DEGALG-RDTSVEGSEMVPGKVELQEKVV--QVSAGDSHTAALTDDGRVFLWGSFRDNNG 151
Query: 247 QLGHGDTLDRPTPKSIAPLE-EVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
+G L P KS+ P++ ++ VV++A+G +++ +T +G +Y+ G G LG
Sbjct: 152 VIG----LLEPMKKSMVPVQVQLDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLG 205
Score = 131 (51.2 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 41/115 (35%), Positives = 58/115 (50%)
Query: 235 GHVHTCGSNTHGQLGHGDT-LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
G V T G GQLG G+ ++R P ++ E+V VQ AG + + ++ +G VYSF
Sbjct: 35 GLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDV---VQAEAGGMHTVCLSKSGQVYSF 91
Query: 294 GSGSNFCLGHGE--QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSL 346
G LG + E+ P ++ + K VV+VSAGD H AL G V L
Sbjct: 92 GCNDEGALGRDTSVEGSEMVPGKVE-LQEK---VVQVSAGDSHTAALTDDGRVFL 142
Score = 128 (50.1 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 50/175 (28%), Positives = 83/175 (47%)
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
+H + + G V T G G + +P LV + V Q AG T L+
Sbjct: 26 SHRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDVV--QAEAGGMHTVCLS 83
Query: 233 IRGHVHTCGSNTHGQLGHGDTLD--RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
G V++ G N G LG +++ P + L+E VVQ++AG S+ A+T +G V
Sbjct: 84 KSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVE-LQE--KVVQVSAGDSHTAALTDDGRV 140
Query: 291 YSFGS--GSNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
+ +GS +N +G E + P +Q + VV+V++G++H+V L + G
Sbjct: 141 FLWGSFRDNNGVIGLLEPMKKSMVPVQVQL----DVPVVKVASGNDHLVMLTADG 191
Score = 121 (47.7 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 64/217 (29%), Positives = 95/217 (43%)
Query: 105 DIVETSAGNMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGP--ETTQCVSFTRINFPS 161
D+V+ AG M HT+ +S S V+S G + G LG E ++ V ++
Sbjct: 68 DVVQAEAGGM-------HTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVP-GKVELQE 119
Query: 162 AAHVVQVSASENHAAFVLQSGQVFTCG---DNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
VVQVSA ++H A + G+VF G DN+ G + + P V+ VP
Sbjct: 120 K--VVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVI-GLLEPMKKSMVP--VQVQLDVPV 174
Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH--------GDT--LDRP-TPKSIAPLEE 267
+V +G + LT G ++T G GQLG G L+R PK + L+
Sbjct: 175 VKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVM-LKS 233
Query: 268 VGSVVQIA-----AGPSYMLAVTGNGVVYSFGSGSNF 299
GS + G + A++ G VY FG SN+
Sbjct: 234 RGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGL-SNY 269
>UNIPROTKB|F1MM88 [details] [associations]
symbol:NEK9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PROSITE:PS50012 GeneTree:ENSGT00700000104074 OMA:GCDGTFL
EMBL:DAAA02029619 IPI:IPI00714098 Ensembl:ENSBTAT00000022098
Uniprot:F1MM88
Length = 994
Score = 151 (58.2 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 63/239 (26%), Positives = 105/239 (43%)
Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
R T+ + +V + +S V G G T Q + + S QV A H A V
Sbjct: 347 RSSTVTEAPIAVVTSRTSEVYVWGGGKSTPQKLDVIK----SGCSARQVCAGNTHFAVVT 402
Query: 180 QSGQVFTC-----GDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFLTI 233
+++T G GH D + +R P+ VE L+G +QV+ G +FT +T
Sbjct: 403 VEKELYTWVNMQGGTKLHGQLGHGD--KASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTD 460
Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEE----VGSVVQIAAGPSYMLAVTGNG 288
G ++ GS+ +G +G +D+ + P++ V Q++ G ++++ +T N
Sbjct: 461 EGQLYAFGSDYYGCMG----VDKVAGAEVLEPMQLDFFLSNPVEQVSCGDNHVVVLTRNK 516
Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSLC 347
VYS+G G LG + D P+ + K + +V V G + L SG V C
Sbjct: 517 EVYSWGCGEYGRLGLDSEEDYYTPQKVDV--PKALIIVAVQCGCDGTFLLTQSGKVLAC 573
Score = 149 (57.5 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 54/262 (20%), Positives = 103/262 (39%)
Query: 98 QSVEHSSDIVETSAGNMQITTGRYHTLLIS-NSSVFSC-----GSSLCGVLGHGPETTQC 151
+S D++++ Q+ G H +++ +++ G+ L G LGHG + +
Sbjct: 373 KSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYR 432
Query: 152 VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCG-HRDTNRPIFRPRLV 210
+ + QVS ++ V GQ++ G + C G + + P +
Sbjct: 433 QP-KHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGAEVLEPMQL 491
Query: 211 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVG 269
+ P +QV+ G N LT V++ G +G+LG D TP+ + P +
Sbjct: 492 DFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALII 551
Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGS----GSNFCLG----HGEQHDELQPRAIQTFRRK 321
VQ +++L +G + G N C+ H H+ + ++
Sbjct: 552 VAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQL 611
Query: 322 GIHVVR-VSAGDEHVVALDSSG 342
+ +R ++ G H ALD G
Sbjct: 612 SFYKIRTIAPGKTHTAALDERG 633
Score = 130 (50.8 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 56/244 (22%), Positives = 101/244 (41%)
Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPET-TQCVSFTRINFPSAAHVVQVSASE 172
Q++ G T+ +++ +++ GS G +G + + +++F + V QVS +
Sbjct: 447 QVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGAEVLEPMQLDFFLSNPVEQVSCGD 506
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
NH + ++ +V++ G G D+ + P+ V+ K + V G + T LT
Sbjct: 507 NHVVVLTRNKEVYSWGCGEYGRLG-LDSEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLT 565
Query: 233 IRGHVHTCGSNTHGQLG----------HGDTLDRPTPKSIAPLEEVG--SVVQIAAGPSY 280
G V CG N +LG H + P S +++ + IA G ++
Sbjct: 566 QSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTH 625
Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
A+ G + +FG LG G L + G V+RVS GDE +A
Sbjct: 626 TAALDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGG-PLGGKQVIRVSCGDEFTIAATD 684
Query: 341 SGYV 344
++
Sbjct: 685 DNHI 688
Score = 127 (49.8 bits), Expect = 0.00011, P = 0.00011
Identities = 50/198 (25%), Positives = 83/198 (41%)
Query: 115 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
Q++ G H ++++ N V+S G G LG E +++ P A +V V +
Sbjct: 501 QVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTP-QKVDVPKALIIVAVQCGCD 559
Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDT-----NRPIFR--P-----RLVEALKGVPCKQV 221
+ QSG+V CG N G N + P L + L + +
Sbjct: 560 GTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTI 619
Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSY 280
G T L RG + T G N GQLG G+ R + PL V++++ G +
Sbjct: 620 APGKTHTAALDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGK-QVIRVSCGDEF 678
Query: 281 MLAVTGNGVVYSFGSGSN 298
+A T + ++++G+G N
Sbjct: 679 TIAATDDNHIFAWGNGGN 696
>UNIPROTKB|P23800 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:10036 "Mesocricetus auratus" [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0007059
"chromosome segregation" evidence=ISS] [GO:0031492 "nucleosomal DNA
binding" evidence=ISS] [GO:0051225 "spindle assembly" evidence=ISS]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
GO:GO:0007059 GO:GO:0051301 GO:GO:0007067 GO:GO:0051225
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0031492 HOVERGEN:HBG017712 EMBL:M33579 PIR:A34726
ProteinModelPortal:P23800 SMR:P23800 Uniprot:P23800
Length = 421
Score = 146 (56.5 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 71/260 (27%), Positives = 111/260 (42%)
Query: 105 DIVETSAGNMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGP--ETTQCVSFTRINFPS 161
D+V+ AG M HT+ ++ S V+S G + G LG E ++ V ++
Sbjct: 68 DVVQAEAGGM-------HTVCLNQSGQVYSFGCNDEGALGRDTSVEGSEMVP-GKVELQE 119
Query: 162 AAHVVQVSASENHAAFVLQSGQVFTCG---DNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
VVQVSA ++H A + + G+VF G DN+ G + + P V+ +P
Sbjct: 120 K--VVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVI-GLLEPMKKSMVP--VQVQLDMPV 174
Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH--------GDT--LDRP-TPKSIAPLEE 267
+V +G + LT G ++T G GQLG G L+R PK + L+
Sbjct: 175 VKVASGNDHLVMLTTDGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVL-LKS 233
Query: 268 VGSVVQIA-----AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
GS ++ G A++ G VY FG + LG P+ + +F+
Sbjct: 234 RGSRGRVRFQDAFCGAYLTFAISREGHVYGFGLSNYHQLGTPGTASCFIPQNLTSFKNST 293
Query: 323 IHVVRVSAGDEHVVALDSSG 342
V S G H + +DS G
Sbjct: 294 KSWVGFSGGQHHTICMDSEG 313
Score = 138 (53.6 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 56/178 (31%), Positives = 84/178 (47%)
Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
V + G G LG G + + P VVQ A H + QSGQV++ G N
Sbjct: 37 VLTLGQGDVGQLGLGESVLERKKPALV--PLLQDVVQAEAGGMHTVCLNQSGQVYSFGCN 94
Query: 191 SSFCCGHRDTN--RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS--NTHG 246
G RDT+ P VE + V QV+AG + T LT G V GS + +G
Sbjct: 95 DEGALG-RDTSVEGSEMVPGKVELQEKVV--QVSAGDSHTAALTEDGRVFLWGSFRDNNG 151
Query: 247 QLGHGDTLDRPTPKSIAPLE-EVGS-VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
+G L P KS+ P++ ++ VV++A+G +++ +T +G +Y+ G G LG
Sbjct: 152 VIG----LLEPMKKSMVPVQVQLDMPVVKVASGNDHLVMLTTDGDLYTLGCGEQGQLG 205
Score = 137 (53.3 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 43/115 (37%), Positives = 59/115 (51%)
Query: 235 GHVHTCGSNTHGQLGHGDT-LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
G V T G GQLG G++ L+R P ++ PL + VVQ AG + + + +G VYSF
Sbjct: 35 GLVLTLGQGDVGQLGLGESVLERKKP-ALVPLLQ--DVVQAEAGGMHTVCLNQSGQVYSF 91
Query: 294 GSGSNFCLGHGE--QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSL 346
G LG + E+ P ++ + K VV+VSAGD H AL G V L
Sbjct: 92 GCNDEGALGRDTSVEGSEMVPGKVE-LQEK---VVQVSAGDSHTAALTEDGRVFL 142
Score = 126 (49.4 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 45/164 (27%), Positives = 78/164 (47%)
Query: 178 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV--TAGLNFTGFLTIRG 235
+ + G V+ G ++ G T F P+ + + K V + G + T + G
Sbjct: 255 ISREGHVYGFGLSNYHQLGTPGT-ASCFIPQNLTSFKNSTKSWVGFSGGQHHTICMDSEG 313
Query: 236 HVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
++ G +G+LG G+ + + P I+ L V SV A G S AV+ +G V+++G
Sbjct: 314 KAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPVVSSV---ACGASVGYAVSKDGRVFAWG 370
Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
G+N+ LG G+ D P + + + V+ VS+G +H V L
Sbjct: 371 MGTNYQLGTGQDEDAWSPVEMTGKQLENRVVLTVSSGGQHTVLL 414
>UNIPROTKB|Q83CB0 [details] [associations]
symbol:CBU_1217 "Hypothetical membrane spanning protein"
species:227377 "Coxiella burnetii RSA 493" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE016828
GenomeReviews:AE016828_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 OMA:GYIYAWG
RefSeq:NP_820212.1 ProteinModelPortal:Q83CB0 GeneID:1209121
KEGG:cbu:CBU_1217 PATRIC:17931169 HOGENOM:HOG000029001
ProtClustDB:CLSK914618 BioCyc:CBUR227377:GJ7S-1203-MONOMER
Uniprot:Q83CB0
Length = 497
Score = 147 (56.8 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 43/134 (32%), Positives = 64/134 (47%)
Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA----P--LEEVGSVVQ 273
QV G T LT G+++ G N++GQLG D DR P + P LE +++
Sbjct: 299 QVVVGDRHTLALTQLGYIYAWGKNSYGQLGFRDQQDRNRPALLPWNRFPGLLERNDRIIE 358
Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDE--LQPRAIQTFRRKGIHVVRVSA 330
+ AG + LA T G +Y +G+ G E +H L RR+G H+V + A
Sbjct: 359 LIAGGARSLARTEQGFIYIWGARWLLVRGDPEFRHHPMLLTENYFPGLRRRGDHLVELIA 418
Query: 331 GDEHVVALDSSGYV 344
G +H +A GY+
Sbjct: 419 GPDHTLARTEQGYI 432
Score = 137 (53.3 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 51/198 (25%), Positives = 88/198 (44%)
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSS--FCCGHR-DTNRPI-----FRPRLVEALKGV 216
+VQ+ + HA + + G ++ G N S G R + ++P F P L+E +G
Sbjct: 180 IVQLLSDYRHAFILTEEGGIYGWGFNISGELGLGDRFERSQPTELPQNFFPYLLE--RGD 237
Query: 217 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA----PLEEVGS-V 271
Q+ + T +GHV+ G N G+LG D DR P ++ P +
Sbjct: 238 RIVQLNFADRYLVARTAQGHVYVWGFNYRGRLGLDDEQDRLHPVELSWDFFPEWHPDDYI 297
Query: 272 VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-----HVV 326
+Q+ G + LA+T G +Y++G S LG +Q D +P + R G+ ++
Sbjct: 298 IQVVVGDRHTLALTQLGYIYAWGKNSYGQLGFRDQQDRNRPALLPWNRFPGLLERNDRII 357
Query: 327 RVSAGDEHVVALDSSGYV 344
+ AG +A G++
Sbjct: 358 ELIAGGARSLARTEQGFI 375
>TIGR_CMR|CBU_1217 [details] [associations]
symbol:CBU_1217 "hypothetical protein" species:227377
"Coxiella burnetii RSA 493" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] INTERPRO:IPR000408
Pfam:PF00415 EMBL:AE016828 GenomeReviews:AE016828_GR
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 OMA:GYIYAWG RefSeq:NP_820212.1
ProteinModelPortal:Q83CB0 GeneID:1209121 KEGG:cbu:CBU_1217
PATRIC:17931169 HOGENOM:HOG000029001 ProtClustDB:CLSK914618
BioCyc:CBUR227377:GJ7S-1203-MONOMER Uniprot:Q83CB0
Length = 497
Score = 147 (56.8 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 43/134 (32%), Positives = 64/134 (47%)
Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA----P--LEEVGSVVQ 273
QV G T LT G+++ G N++GQLG D DR P + P LE +++
Sbjct: 299 QVVVGDRHTLALTQLGYIYAWGKNSYGQLGFRDQQDRNRPALLPWNRFPGLLERNDRIIE 358
Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDE--LQPRAIQTFRRKGIHVVRVSA 330
+ AG + LA T G +Y +G+ G E +H L RR+G H+V + A
Sbjct: 359 LIAGGARSLARTEQGFIYIWGARWLLVRGDPEFRHHPMLLTENYFPGLRRRGDHLVELIA 418
Query: 331 GDEHVVALDSSGYV 344
G +H +A GY+
Sbjct: 419 GPDHTLARTEQGYI 432
Score = 137 (53.3 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 51/198 (25%), Positives = 88/198 (44%)
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSS--FCCGHR-DTNRPI-----FRPRLVEALKGV 216
+VQ+ + HA + + G ++ G N S G R + ++P F P L+E +G
Sbjct: 180 IVQLLSDYRHAFILTEEGGIYGWGFNISGELGLGDRFERSQPTELPQNFFPYLLE--RGD 237
Query: 217 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA----PLEEVGS-V 271
Q+ + T +GHV+ G N G+LG D DR P ++ P +
Sbjct: 238 RIVQLNFADRYLVARTAQGHVYVWGFNYRGRLGLDDEQDRLHPVELSWDFFPEWHPDDYI 297
Query: 272 VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-----HVV 326
+Q+ G + LA+T G +Y++G S LG +Q D +P + R G+ ++
Sbjct: 298 IQVVVGDRHTLALTQLGYIYAWGKNSYGQLGFRDQQDRNRPALLPWNRFPGLLERNDRII 357
Query: 327 RVSAGDEHVVALDSSGYV 344
+ AG +A G++
Sbjct: 358 ELIAGGARSLARTEQGFI 375
>UNIPROTKB|C9JQZ4 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0031965 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341 IPI:IPI00925791
ProteinModelPortal:C9JQZ4 SMR:C9JQZ4 STRING:C9JQZ4
Ensembl:ENST00000430407 ArrayExpress:C9JQZ4 Bgee:C9JQZ4
Uniprot:C9JQZ4
Length = 283
Score = 142 (55.0 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 55/178 (30%), Positives = 85/178 (47%)
Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
V + G G LG G + ++ P VVQ A H + +SGQV++ G N
Sbjct: 37 VLTLGQGDVGQLGLGENVMERKKPALVSIPE--DVVQAEAGGMHTVCLSKSGQVYSFGCN 94
Query: 191 SSFCCGHRDTN--RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS--NTHG 246
G RDT+ P VE + V QV+AG + T LT G V GS + +G
Sbjct: 95 DEGALG-RDTSVEGSEMVPGKVELQEKVV--QVSAGDSHTAALTDDGRVFLWGSFRDNNG 151
Query: 247 QLGHGDTLDRPTPKSIAPLE-EVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
+G L P KS+ P++ ++ VV++A+G +++ +T +G +Y+ G G LG
Sbjct: 152 VIG----LLEPMKKSMVPVQVQLDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLG 205
Score = 131 (51.2 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 41/115 (35%), Positives = 58/115 (50%)
Query: 235 GHVHTCGSNTHGQLGHGDT-LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
G V T G GQLG G+ ++R P ++ E+V VQ AG + + ++ +G VYSF
Sbjct: 35 GLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDV---VQAEAGGMHTVCLSKSGQVYSF 91
Query: 294 GSGSNFCLGHGE--QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSL 346
G LG + E+ P ++ + K VV+VSAGD H AL G V L
Sbjct: 92 GCNDEGALGRDTSVEGSEMVPGKVE-LQEK---VVQVSAGDSHTAALTDDGRVFL 142
Score = 128 (50.1 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 50/175 (28%), Positives = 83/175 (47%)
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
+H + + G V T G G + +P LV + V Q AG T L+
Sbjct: 26 SHRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDVV--QAEAGGMHTVCLS 83
Query: 233 IRGHVHTCGSNTHGQLGHGDTLD--RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
G V++ G N G LG +++ P + L+E VVQ++AG S+ A+T +G V
Sbjct: 84 KSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVE-LQE--KVVQVSAGDSHTAALTDDGRV 140
Query: 291 YSFGS--GSNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
+ +GS +N +G E + P +Q + VV+V++G++H+V L + G
Sbjct: 141 FLWGSFRDNNGVIGLLEPMKKSMVPVQVQL----DVPVVKVASGNDHLVMLTADG 191
Score = 122 (48.0 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 64/220 (29%), Positives = 95/220 (43%)
Query: 105 DIVETSAGNMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGP--ETTQCVSFTRINFPS 161
D+V+ AG M HT+ +S S V+S G + G LG E ++ V ++
Sbjct: 68 DVVQAEAGGM-------HTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVP-GKVELQE 119
Query: 162 AAHVVQVSASENHAAFVLQSGQVFTCG---DNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
VVQVSA ++H A + G+VF G DN+ G + + P V+ VP
Sbjct: 120 K--VVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVI-GLLEPMKKSMVP--VQVQLDVPV 174
Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH--------GDT--LDRP-TPKSIAPLEE 267
+V +G + LT G ++T G GQLG G L+R PK + L+
Sbjct: 175 VKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVM-LKS 233
Query: 268 VGSVVQIA-----AGPSYMLAVTGNGVVYSFGSGSNFCLG 302
GS + G + A++ G VY FG + LG
Sbjct: 234 RGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLG 273
>RGD|1307558 [details] [associations]
symbol:Wbscr16 "Williams-Beuren syndrome chromosome region 16"
species:10116 "Rattus norvegicus" [GO:0005739 "mitochondrion"
evidence=IEA;ISO] RGD:1307558 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
EMBL:CH473973 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104312 CTD:81554 OMA:MVTLAKS
OrthoDB:EOG4F1X33 IPI:IPI00189798 RefSeq:NP_001101802.1
UniGene:Rn.40552 Ensembl:ENSRNOT00000002032 GeneID:360796
KEGG:rno:360796 UCSC:RGD:1307558 NextBio:674123 Uniprot:D4AE90
Length = 461
Score = 145 (56.1 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 51/190 (26%), Positives = 84/190 (44%)
Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPC 218
P V+QVS H+ + VF+ G+N+ CG + ++ V ++
Sbjct: 168 PQETKVLQVSCGRAHSLVLTDREGVFSMGNNAHGQCGRKVVEDEVYSESHKVHRMQDFEG 227
Query: 219 K--QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIA 275
+ QV G + + FLT +G V++CG GQ G G TP + L V +VVQ+A
Sbjct: 228 QVVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSTPSKLGGDLAGV-TVVQVA 286
Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEH 334
LA++ +G V+ +G+ L ++ PR + F G V +V+ G
Sbjct: 287 TYGDCCLALSADGGVFGWGNSEYLQLASVTDSTQVNVPRCLP-FSGVG-KVKQVACGGTG 344
Query: 335 VVALDSSGYV 344
L+ G+V
Sbjct: 345 CAILNEEGHV 354
Score = 143 (55.4 bits), Expect = 6.4e-07, P = 6.4e-07
Identities = 65/238 (27%), Positives = 94/238 (39%)
Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
+Q+ G+ H+L +++ V+SCG G G G + VVQV+
Sbjct: 230 VQVVCGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSTPSKLGGDLAGVTVVQVATYG 289
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV-PCKQVTAGLNFTGFL 231
+ + G VF G++ + + PR + GV KQV G L
Sbjct: 290 DCCLALSADGGVFGWGNSEYLQLASVTDSTQVNVPRCLP-FSGVGKVKQVACGGTGCAIL 348
Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAP----LEEVG---SVVQIAAGPSYMLA 283
GHV G +G LG G L P+ I P L E V QI G S+ A
Sbjct: 349 NEEGHVFVWG---YGILGKGPNLSETALPEMIPPTLFGLTEFNPEVKVSQIRCGLSHFAA 405
Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
+T G ++ +G CLG G D+ P + G V V+ G +H+V L S
Sbjct: 406 LTNKGELFVWGKNIRGCLGIGRLEDQYFPWRVTM---PG-EPVDVACGVDHMVTLAKS 459
Score = 139 (54.0 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 64/244 (26%), Positives = 107/244 (43%)
Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFT-RINFPS--AAHVVQVS 169
+Q++ GR H+L++++ VFS G++ G G + S + +++ VVQV
Sbjct: 174 LQVSCGRAHSLVLTDREGVFSMGNNAHGQCGRKVVEDEVYSESHKVHRMQDFEGQVVQVV 233
Query: 170 ASENHAAFVLQSGQVFTCG--DNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLN 226
++H+ F+ G+V++CG + GH + T+ P +L L GV QV +
Sbjct: 234 CGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSTP---SKLGGDLAGVTVVQVATYGD 290
Query: 227 FTGFLTIRGHVHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
L+ G V G++ + QL D+ P+ + P VG V Q+A G + +
Sbjct: 291 CCLALSADGGVFGWGNSEYLQLASVTDSTQVNVPRCL-PFSGVGKVKQVACGGTGCAILN 349
Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQ------TFRRKGIHVVRVSAGDEHVVAL 338
G V+ +G G LG G E P I T + V ++ G H AL
Sbjct: 350 EEGHVFVWGYG---ILGKGPNLSETALPEMIPPTLFGLTEFNPEVKVSQIRCGLSHFAAL 406
Query: 339 DSSG 342
+ G
Sbjct: 407 TNKG 410
>MGI|MGI:2444156 [details] [associations]
symbol:Rccd1 "RCC1 domain containing 1" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] MGI:MGI:2444156
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005886 GO:GO:0005737
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 CTD:91433 HOGENOM:HOG000154085 HOVERGEN:HBG061852
OMA:ERPGAWF OrthoDB:EOG41NTMF EMBL:AK030872 EMBL:AK084219
EMBL:AK088662 EMBL:BC069844 IPI:IPI00881984 IPI:IPI00896067
RefSeq:NP_775621.2 UniGene:Mm.474502 ProteinModelPortal:Q8BTU7
SMR:Q8BTU7 PhosphoSite:Q8BTU7 PRIDE:Q8BTU7
Ensembl:ENSMUST00000047362 Ensembl:ENSMUST00000121882 GeneID:269955
KEGG:mmu:269955 UCSC:uc009ial.2 GeneTree:ENSGT00700000104312
InParanoid:Q8BTU7 NextBio:393123 Bgee:Q8BTU7 Genevestigator:Q8BTU7
Uniprot:Q8BTU7
Length = 377
Score = 126 (49.4 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 29/86 (33%), Positives = 46/86 (53%)
Query: 257 PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
P P PL V Q+ G ++L + G V+S+G+G + LGHG EL+PR ++
Sbjct: 149 PEPPFCQPLAPELRVRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHGTLEAELEPRLLE 208
Query: 317 TFRRKGIHVVRVSAGDEHVVALDSSG 342
+ G+ + +V+AG H V L +G
Sbjct: 209 ALQ--GLRMAKVAAGGWHSVCLSETG 232
Score = 58 (25.5 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 21/73 (28%), Positives = 35/73 (47%)
Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
A + H A+ G F CG + G +++ ++ P + A + C QV+AG ++T
Sbjct: 2 AEKRHGAWF---GFGF-CGFGQAL--GSGNSHHSVYSPEPLHASDDI-C-QVSAGWSYTA 53
Query: 230 FLTIRGHVHTCGS 242
+T G V GS
Sbjct: 54 LVTRGGRVELSGS 66
>UNIPROTKB|Q74DR4 [details] [associations]
symbol:GSU1251 "ATS1 domain repeat protein" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
Gene3D:2.60.40.360 InterPro:IPR008962 InterPro:IPR011040
SUPFAM:SSF50939 RefSeq:NP_952304.1 ProteinModelPortal:Q74DR4
GeneID:2688149 KEGG:gsu:GSU1251 PATRIC:22025273
HOGENOM:HOG000144307 OMA:QADGTLW
BioCyc:GSUL243231:GH27-1279-MONOMER Uniprot:Q74DR4
Length = 2082
Score = 152 (58.6 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 63/237 (26%), Positives = 103/237 (43%)
Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
+ G H L + S+ ++++ GS+ G LG G + + + P V +A H
Sbjct: 37 VAAGGNHVLTLRSDGTLWAAGSNQFGQLGDGTGINRT---SPVQVPGTWKTV--AAGTTH 91
Query: 175 AAFVLQSGQVFTCGDN------SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
+ + G ++ G N G TN+ F P + G V+AG T
Sbjct: 92 SLGIKADGSLWAWGSNLFGQLGQPLVNGQLATNK--FSP--IRIGTGNDWVAVSAG-ELT 146
Query: 229 GF-LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA--PLEEVGSVVQIAAGPSYMLAVT 285
F L G + + G+N G+LG G T+ RP P + PL G V +AAG + LA+
Sbjct: 147 SFGLKGDGTLWSWGNNLFGELGDGTTVSRPQPVQVVADPLSN-GRYVAVAAGGEHALALQ 205
Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
+G ++++G+ LG G P ++ + +SAG+ H VAL + G
Sbjct: 206 ADGTLWAWGANLTGQLGTGGTGILPNPTPLKIGTDRDW--TAISAGEMHSVALKADG 260
Score = 140 (54.3 bits), Expect = 9.7e-06, P = 9.7e-06
Identities = 53/193 (27%), Positives = 83/193 (43%)
Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
+ G H L + ++ ++++ G++L G LG G T + T + + +SA E H
Sbjct: 194 VAAGGEHALALQADGTLWAWGANLTGQLGTGG-TGILPNPTPLKIGTDRDWTAISAGEMH 252
Query: 175 AAFVLQSGQVFTCGDN--SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
+ + G +++ G N G + P V G + AG T L
Sbjct: 253 SVALKADGSLWSWGQNLFGELGNGVALPGANVTTPTRVGT--GSDWVAIAAGALHTVALH 310
Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
G V G+N G +G G +R TP I AP+ V +V IAAG +V NG V+
Sbjct: 311 RNGTVSAWGNNAQGAVGDGTVANRSTPTLIVAPVTLVNNVA-IAAGTGVSFSVLANGTVF 369
Query: 292 SFGSGSNFCLGHG 304
+G LG+G
Sbjct: 370 GWGGNGAGQLGNG 382
Score = 138 (53.6 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 69/238 (28%), Positives = 106/238 (44%)
Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVS--FTRINFPSAAHVVQVSASE 172
+ G H+L I ++ S+++ GS+L G LG Q + F+ I + V VSA E
Sbjct: 85 VAAGTTHSLGIKADGSLWAWGSNLFGQLGQPLVNGQLATNKFSPIRIGTGNDWVAVSAGE 144
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
+ + G +++ G+N G T +RP + + L V AG L
Sbjct: 145 LTSFGLKGDGTLWSWGNNLFGELGDGTTVSRPQPVQVVADPLSNGRYVAVAAGGEHALAL 204
Query: 232 TIRGHVHTCGSNTHGQLGHGDT--LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
G + G+N GQLG G T L PTP I + + I+AG + +A+ +G
Sbjct: 205 QADGTLWAWGANLTGQLGTGGTGILPNPTPLKIGTDRDWTA---ISAGEMHSVALKADGS 261
Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV--VRVSAGDEHVVALDSSGYVS 345
++S+G LG+G L + T R G V ++AG H VAL +G VS
Sbjct: 262 LWSWGQNLFGELGNGVA---LPGANVTTPTRVGTGSDWVAIAAGALHTVALHRNGTVS 316
Score = 135 (52.6 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 74/253 (29%), Positives = 114/253 (45%)
Query: 110 SAGN--MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETT------QCVSFTRINFP 160
SAGN + G H+L L ++ +++S G + G LG G T+ Q V+ NF
Sbjct: 502 SAGNDWTAVAGGGAHSLGLKADGTLWSWGDNTFGQLGDGTGTSNRTTPVQIVTGNPGNFD 561
Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRP---RLVEALKGV- 216
+ V V+A + + G ++T GDNS G T+ + P R V A V
Sbjct: 562 R--NWVAVAAGGVFSLALQADGTIWTWGDNSLLQLG---TDPAMLTPATQRNVPAQLAVA 616
Query: 217 --PCKQ-------VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE 267
P + AG + L G + G+N+ GQLG+G T TP + E
Sbjct: 617 SPPSTAFNSSWVAIAAGQDHGLSLQADGTLWAWGANSVGQLGNGVTTATFTPVQVINAEG 676
Query: 268 VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG---HGEQHDELQPRAIQTFRRKGIH 324
V V +AAG S+ LA +G ++++G+ ++ LG H D L P+ T + +
Sbjct: 677 V-PYVSLAAGTSHSLAGRSDGTLWAWGNNTSGQLGTGPHPGDADPLNPQP-HTVPARILT 734
Query: 325 VVRVSAGDEHVVA 337
VSA D+ +VA
Sbjct: 735 SNPVSAADDWLVA 747
Score = 126 (49.4 bits), Expect = 0.00033, P = 0.00033
Identities = 61/244 (25%), Positives = 102/244 (41%)
Query: 109 TSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ 167
T N+ I G + +++N +VF G + G LG+G T V+ + A+ +
Sbjct: 345 TLVNNVAIAAGTGVSFSVLANGTVFGWGGNGAGQLGNG--TFGAVTAPTVLSAGASAWLG 402
Query: 168 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA-GLN 226
V + + +G ++ G N+S G T P P V + G + TA G
Sbjct: 403 VEPGGAFSLGLRSNGTLWAWGGNASGQLGD-GTTTPSAIP--VPVVGGAGNWRTTATGTA 459
Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA---PLEEVGSVVQIAAGPSYMLA 283
+ + G + G N+ GQLG G T+ TP+ I P +A G ++ L
Sbjct: 460 HSVAVRADGTLWAWGDNSSGQLGIGSTVAASTPQQITVTNPASAGNDWTAVAGGGAHSLG 519
Query: 284 VTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGI--HVVRVSAGDEHVVALDS 340
+ +G ++S+G + LG G + P I T + V V+AG +AL +
Sbjct: 520 LKADGTLWSWGDNTFGQLGDGTGTSNRTTPVQIVTGNPGNFDRNWVAVAAGGVFSLALQA 579
Query: 341 SGYV 344
G +
Sbjct: 580 DGTI 583
>TIGR_CMR|GSU_1251 [details] [associations]
symbol:GSU_1251 "BNR repeat domain protein" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
Gene3D:2.60.40.360 InterPro:IPR008962 InterPro:IPR011040
SUPFAM:SSF50939 RefSeq:NP_952304.1 ProteinModelPortal:Q74DR4
GeneID:2688149 KEGG:gsu:GSU1251 PATRIC:22025273
HOGENOM:HOG000144307 OMA:QADGTLW
BioCyc:GSUL243231:GH27-1279-MONOMER Uniprot:Q74DR4
Length = 2082
Score = 152 (58.6 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 63/237 (26%), Positives = 103/237 (43%)
Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
+ G H L + S+ ++++ GS+ G LG G + + + P V +A H
Sbjct: 37 VAAGGNHVLTLRSDGTLWAAGSNQFGQLGDGTGINRT---SPVQVPGTWKTV--AAGTTH 91
Query: 175 AAFVLQSGQVFTCGDN------SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
+ + G ++ G N G TN+ F P + G V+AG T
Sbjct: 92 SLGIKADGSLWAWGSNLFGQLGQPLVNGQLATNK--FSP--IRIGTGNDWVAVSAG-ELT 146
Query: 229 GF-LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA--PLEEVGSVVQIAAGPSYMLAVT 285
F L G + + G+N G+LG G T+ RP P + PL G V +AAG + LA+
Sbjct: 147 SFGLKGDGTLWSWGNNLFGELGDGTTVSRPQPVQVVADPLSN-GRYVAVAAGGEHALALQ 205
Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
+G ++++G+ LG G P ++ + +SAG+ H VAL + G
Sbjct: 206 ADGTLWAWGANLTGQLGTGGTGILPNPTPLKIGTDRDW--TAISAGEMHSVALKADG 260
Score = 140 (54.3 bits), Expect = 9.7e-06, P = 9.7e-06
Identities = 53/193 (27%), Positives = 83/193 (43%)
Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
+ G H L + ++ ++++ G++L G LG G T + T + + +SA E H
Sbjct: 194 VAAGGEHALALQADGTLWAWGANLTGQLGTGG-TGILPNPTPLKIGTDRDWTAISAGEMH 252
Query: 175 AAFVLQSGQVFTCGDN--SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
+ + G +++ G N G + P V G + AG T L
Sbjct: 253 SVALKADGSLWSWGQNLFGELGNGVALPGANVTTPTRVGT--GSDWVAIAAGALHTVALH 310
Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
G V G+N G +G G +R TP I AP+ V +V IAAG +V NG V+
Sbjct: 311 RNGTVSAWGNNAQGAVGDGTVANRSTPTLIVAPVTLVNNVA-IAAGTGVSFSVLANGTVF 369
Query: 292 SFGSGSNFCLGHG 304
+G LG+G
Sbjct: 370 GWGGNGAGQLGNG 382
Score = 138 (53.6 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 69/238 (28%), Positives = 106/238 (44%)
Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVS--FTRINFPSAAHVVQVSASE 172
+ G H+L I ++ S+++ GS+L G LG Q + F+ I + V VSA E
Sbjct: 85 VAAGTTHSLGIKADGSLWAWGSNLFGQLGQPLVNGQLATNKFSPIRIGTGNDWVAVSAGE 144
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
+ + G +++ G+N G T +RP + + L V AG L
Sbjct: 145 LTSFGLKGDGTLWSWGNNLFGELGDGTTVSRPQPVQVVADPLSNGRYVAVAAGGEHALAL 204
Query: 232 TIRGHVHTCGSNTHGQLGHGDT--LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
G + G+N GQLG G T L PTP I + + I+AG + +A+ +G
Sbjct: 205 QADGTLWAWGANLTGQLGTGGTGILPNPTPLKIGTDRDWTA---ISAGEMHSVALKADGS 261
Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV--VRVSAGDEHVVALDSSGYVS 345
++S+G LG+G L + T R G V ++AG H VAL +G VS
Sbjct: 262 LWSWGQNLFGELGNGVA---LPGANVTTPTRVGTGSDWVAIAAGALHTVALHRNGTVS 316
Score = 135 (52.6 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 74/253 (29%), Positives = 114/253 (45%)
Query: 110 SAGN--MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETT------QCVSFTRINFP 160
SAGN + G H+L L ++ +++S G + G LG G T+ Q V+ NF
Sbjct: 502 SAGNDWTAVAGGGAHSLGLKADGTLWSWGDNTFGQLGDGTGTSNRTTPVQIVTGNPGNFD 561
Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRP---RLVEALKGV- 216
+ V V+A + + G ++T GDNS G T+ + P R V A V
Sbjct: 562 R--NWVAVAAGGVFSLALQADGTIWTWGDNSLLQLG---TDPAMLTPATQRNVPAQLAVA 616
Query: 217 --PCKQ-------VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE 267
P + AG + L G + G+N+ GQLG+G T TP + E
Sbjct: 617 SPPSTAFNSSWVAIAAGQDHGLSLQADGTLWAWGANSVGQLGNGVTTATFTPVQVINAEG 676
Query: 268 VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG---HGEQHDELQPRAIQTFRRKGIH 324
V V +AAG S+ LA +G ++++G+ ++ LG H D L P+ T + +
Sbjct: 677 V-PYVSLAAGTSHSLAGRSDGTLWAWGNNTSGQLGTGPHPGDADPLNPQP-HTVPARILT 734
Query: 325 VVRVSAGDEHVVA 337
VSA D+ +VA
Sbjct: 735 SNPVSAADDWLVA 747
Score = 126 (49.4 bits), Expect = 0.00033, P = 0.00033
Identities = 61/244 (25%), Positives = 102/244 (41%)
Query: 109 TSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ 167
T N+ I G + +++N +VF G + G LG+G T V+ + A+ +
Sbjct: 345 TLVNNVAIAAGTGVSFSVLANGTVFGWGGNGAGQLGNG--TFGAVTAPTVLSAGASAWLG 402
Query: 168 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA-GLN 226
V + + +G ++ G N+S G T P P V + G + TA G
Sbjct: 403 VEPGGAFSLGLRSNGTLWAWGGNASGQLGD-GTTTPSAIP--VPVVGGAGNWRTTATGTA 459
Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA---PLEEVGSVVQIAAGPSYMLA 283
+ + G + G N+ GQLG G T+ TP+ I P +A G ++ L
Sbjct: 460 HSVAVRADGTLWAWGDNSSGQLGIGSTVAASTPQQITVTNPASAGNDWTAVAGGGAHSLG 519
Query: 284 VTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGI--HVVRVSAGDEHVVALDS 340
+ +G ++S+G + LG G + P I T + V V+AG +AL +
Sbjct: 520 LKADGTLWSWGDNTFGQLGDGTGTSNRTTPVQIVTGNPGNFDRNWVAVAAGGVFSLALQA 579
Query: 341 SGYV 344
G +
Sbjct: 580 DGTI 583
>MGI|MGI:1913989 [details] [associations]
symbol:Rcc1 "regulator of chromosome condensation 1"
species:10090 "Mus musculus" [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=ISO] [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0000794 "condensed nuclear chromosome"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0005085 "guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=ISO;IDA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007052
"mitotic spindle organization" evidence=ISO] [GO:0007059
"chromosome segregation" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007088 "regulation of mitosis" evidence=ISO]
[GO:0007090 "regulation of S phase of mitotic cell cycle"
evidence=ISO] [GO:0031492 "nucleosomal DNA binding" evidence=ISO]
[GO:0042393 "histone binding" evidence=ISO] [GO:0050790 "regulation
of catalytic activity" evidence=IDA] [GO:0051225 "spindle assembly"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
MGI:MGI:1913989 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0007088 GO:GO:0007059 GO:GO:0051301
GO:GO:0007067 GO:GO:0007052 GO:GO:0051225 GO:GO:0000082
GO:GO:0031965 GO:GO:0000790 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0000794 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GO:GO:0007090 GO:GO:0031492 GeneTree:ENSGT00700000104160 KO:K11493
CTD:1104 HOGENOM:HOG000234341 HOVERGEN:HBG017712 EMBL:AK150153
EMBL:BC019807 IPI:IPI00626402 RefSeq:NP_598639.1 UniGene:Mm.255045
ProteinModelPortal:Q8VE37 SMR:Q8VE37 MINT:MINT-2568412
STRING:Q8VE37 PhosphoSite:Q8VE37 PaxDb:Q8VE37 PRIDE:Q8VE37
Ensembl:ENSMUST00000084250 Ensembl:ENSMUST00000105951 GeneID:100088
KEGG:mmu:100088 OrthoDB:EOG4320Z9 ChiTaRS:RCC1 NextBio:354253
Bgee:Q8VE37 CleanEx:MM_RCC1 Genevestigator:Q8VE37
GermOnline:ENSMUSG00000028896 Uniprot:Q8VE37
Length = 421
Score = 143 (55.4 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 56/178 (31%), Positives = 85/178 (47%)
Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
V + G G LG G + + P VVQ A H + QSGQV++ G N
Sbjct: 37 VLTLGQGDVGQLGLGESVLERKKPALV--PLLQDVVQAEAGGMHTVCLSQSGQVYSFGCN 94
Query: 191 SSFCCGHRDTN--RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS--NTHG 246
G RDT+ P VE + V QV+AG + T LT G V GS + +G
Sbjct: 95 DEGALG-RDTSVEGSEMVPGKVELQEKVV--QVSAGDSHTAALTEDGRVFLWGSFRDNNG 151
Query: 247 QLGHGDTLDRPTPKSIAPLE-EVGS-VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
+G L P KS+ P++ ++ + VV++A+G +++ +T +G +Y+ G G LG
Sbjct: 152 VIG----LLEPMKKSMVPVQVQLDAPVVKVASGNDHLVMLTNDGDLYTLGCGEQGQLG 205
Score = 143 (55.4 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 70/259 (27%), Positives = 110/259 (42%)
Query: 105 DIVETSAGNMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGP--ETTQCVSFTRINFPS 161
D+V+ AG M HT+ +S S V+S G + G LG E ++ V ++
Sbjct: 68 DVVQAEAGGM-------HTVCLSQSGQVYSFGCNDEGALGRDTSVEGSEMVP-GKVELQE 119
Query: 162 AAHVVQVSASENHAAFVLQSGQVFTCG---DNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
VVQVSA ++H A + + G+VF G DN+ G + + P V+ P
Sbjct: 120 K--VVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVI-GLLEPMKKSMVP--VQVQLDAPV 174
Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTL--DRPTPKSIA----P----LEEV 268
+V +G + LT G ++T G GQLG L +R + + P L+
Sbjct: 175 VKVASGNDHLVMLTNDGDLYTLGCGEQGQLGRVPELFANRGGRQGLGRLLVPRCVLLKSR 234
Query: 269 GSVVQIA-----AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 323
G+ ++ G + A++ G VY FG + LG P+ + +F+
Sbjct: 235 GTRGRVRFQDAFCGAYFTFAISREGHVYGFGLSNYHQLGTPGTGSCFIPQNLTSFKNSTK 294
Query: 324 HVVRVSAGDEHVVALDSSG 342
V S G H V +DS G
Sbjct: 295 SWVGFSGGQHHTVCMDSEG 313
Score = 138 (53.6 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 43/115 (37%), Positives = 60/115 (52%)
Query: 235 GHVHTCGSNTHGQLGHGDT-LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
G V T G GQLG G++ L+R P ++ PL + VVQ AG + + ++ +G VYSF
Sbjct: 35 GLVLTLGQGDVGQLGLGESVLERKKP-ALVPLLQ--DVVQAEAGGMHTVCLSQSGQVYSF 91
Query: 294 GSGSNFCLGHGE--QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSL 346
G LG + E+ P ++ + K VV+VSAGD H AL G V L
Sbjct: 92 GCNDEGALGRDTSVEGSEMVPGKVE-LQEK---VVQVSAGDSHTAALTEDGRVFL 142
Score = 128 (50.1 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 45/164 (27%), Positives = 78/164 (47%)
Query: 178 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV--TAGLNFTGFLTIRG 235
+ + G V+ G ++ G T F P+ + + K V + G + T + G
Sbjct: 255 ISREGHVYGFGLSNYHQLGTPGTGS-CFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEG 313
Query: 236 HVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
++ G +G+LG G+ + + P I+ L V SV A G S AV+ +G V+++G
Sbjct: 314 KAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPVVSSV---ACGASVGYAVSKDGRVFAWG 370
Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
G+N+ LG G+ D P + + + V+ VS+G +H V L
Sbjct: 371 MGTNYQLGTGQDEDAWSPVEMTGKQLENRVVLTVSSGGQHTVLL 414
>SGD|S000003065 [details] [associations]
symbol:SRM1 "Nucleotide exchange factor for Gsp1p"
species:4932 "Saccharomyces cerevisiae" [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0007067 "mitosis" evidence=IEA] [GO:0019236
"response to pheromone" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IDA]
[GO:0004871 "signal transducer activity" evidence=IMP] [GO:0006810
"transport" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=ISM] [GO:0000054
"ribosomal subunit export from nucleus" evidence=IMP] [GO:0006407
"rRNA export from nucleus" evidence=IMP] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IEA]
SGD:S000003065 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016021
GO:GO:0051301 GO:GO:0007067 EMBL:BK006941 GO:GO:0000790
GO:GO:0004871 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005085 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 GO:GO:0019236 GO:GO:0000054
GeneTree:ENSGT00700000104160 GO:GO:0006407 OMA:PFEAIWA
HOGENOM:HOG000170207 OrthoDB:EOG466ZVF EMBL:M27013 EMBL:Z72619
PIR:A32320 RefSeq:NP_011418.1 PDB:3OF7 PDBsum:3OF7
ProteinModelPortal:P21827 SMR:P21827 DIP:DIP-2315N IntAct:P21827
MINT:MINT-561451 STRING:P21827 PaxDb:P21827 PeptideAtlas:P21827
EnsemblFungi:YGL097W GeneID:852782 KEGG:sce:YGL097W CYGD:YGL097w
EvolutionaryTrace:P21827 NextBio:972265 Genevestigator:P21827
GermOnline:YGL097W Uniprot:P21827
Length = 482
Score = 143 (55.4 bits), Expect = 6.9e-07, P = 6.9e-07
Identities = 56/241 (23%), Positives = 103/241 (42%)
Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGP-ETTQCVSFTRINFPSAAHVVQVSAS 171
+Q+ G+ H L + VF+ G+ LG E + + F HV +++
Sbjct: 224 VQLAPGKDHILFLDEEGMVFAWGNGQQNQLGRKVMERFRLKTLDPRPF-GLRHVKYIASG 282
Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCG-HRDTNRP--IFRPRLVEALKGVPCKQVTAGLNFT 228
ENH + + ++ + G N CG D + +P+ + V + + AG + +
Sbjct: 283 ENHCFALTKDNKLVSWGLNQFGQCGVSEDVEDGALVTKPKRLALPDNVVIRSIAAGEHHS 342
Query: 229 GFLTIRGHVHTCGSNTHGQLG-HGDTLDRPTPKSI------APL----EEVGSVVQIAAG 277
L+ G +++CG ++G D L T K + PL V +AAG
Sbjct: 343 LILSQDGDLYSCGRLDMFEVGIPKDNLPEYTYKDVHGKARAVPLPTKLNNVPKFKSVAAG 402
Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVV 336
+ +AV NG+ YS+G G + +G G D+ + P I+ + +++ V G + V
Sbjct: 403 SHHSVAVAQNGIAYSWGFGETYAVGLGPFEDDTEVPTRIKNTATQDHNIILVGCGGQFSV 462
Query: 337 A 337
+
Sbjct: 463 S 463
Score = 121 (47.7 bits), Expect = 0.00019, P = 0.00019
Identities = 59/238 (24%), Positives = 104/238 (43%)
Query: 125 LISNSSVFSCGSSLC--GVLGHGPETTQCVSFTRINFP--SAAHVVQVSASENHAAFVLQ 180
L SN V++ G+ C G+LG + + + T P S ++VQ++ ++H F+ +
Sbjct: 180 LFSNGEVYAWGTFRCNEGILGFYQDKIK-IQKTPWKVPTFSKYNIVQLAPGKDHILFLDE 238
Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK-GVP-CKQVTAGLNFTGFLTIRGHVH 238
G VF G+ G + R FR + ++ G+ K + +G N LT +
Sbjct: 239 EGMVFAWGNGQQNQLGRKVMER--FRLKTLDPRPFGLRHVKYIASGENHCFALTKDNKLV 296
Query: 239 TCGSNTHGQLGHGDTLDRPT----PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
+ G N GQ G + ++ PK +A + V + IAAG + L ++ +G +YS G
Sbjct: 297 SWGLNQFGQCGVSEDVEDGALVTKPKRLALPDNV-VIRSIAAGEHHSLILSQDGDLYSCG 355
Query: 295 SGSNFCLG----------HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
F +G + + H + + + T V+AG H VA+ +G
Sbjct: 356 RLDMFEVGIPKDNLPEYTYKDVHGKARAVPLPTKLNNVPKFKSVAAGSHHSVAVAQNG 413
Score = 103 (41.3 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 31/104 (29%), Positives = 54/104 (51%)
Query: 246 GQLGHGDTLDRPTPK-SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG--SNFCLG 302
G L ++ P+ S PL E VVQ+AA + A+ NG VY++G+ + LG
Sbjct: 141 GDLNELESTPAKIPRESFPPLAEGHKVVQLAATDNMSCALFSNGEVYAWGTFRCNEGILG 200
Query: 303 HGEQHDELQ--PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
+ ++Q P + TF + ++V+++ G +H++ LD G V
Sbjct: 201 FYQDKIKIQKTPWKVPTFSK--YNIVQLAPGKDHILFLDEEGMV 242
Score = 62 (26.9 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 27/97 (27%), Positives = 38/97 (39%)
Query: 162 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFC---CGHRDTNRPIFRPRLVEALKGVPC 218
A+H++ H +Q +F C S C G N+ + RPRL L
Sbjct: 26 ASHIINAQEDYKHMYLSVQPLDIF-CWGTGSMCELGLGPLAKNKEVKRPRLNPFLPRDEA 84
Query: 219 KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 253
K ++ G T L +V + G N G LG DT
Sbjct: 85 KIISFAVGGMHTLALDEESNVWSWGCNDVGALGR-DT 120
>ZFIN|ZDB-GENE-080929-1 [details] [associations]
symbol:als2b "amyotrophic lateral sclerosis 2b
(juvenile)" species:7955 "Danio rerio" [GO:0035023 "regulation of
Rho protein signal transduction" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005089 "Rho guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0005543 "phospholipid
binding" evidence=IEA] InterPro:IPR000219 InterPro:IPR001849
Pfam:PF00621 PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408
Pfam:PF00415 Pfam:PF02204 ZFIN:ZDB-GENE-080929-1 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0005622 GO:GO:0005089
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023 InterPro:IPR003409
InterPro:IPR003123 Pfam:PF02493 SMART:SM00698 PROSITE:PS51205
GeneTree:ENSGT00600000084242 KO:K04575 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 EMBL:CU570787 EMBL:BX927225
EMBL:CU915284 IPI:IPI01024580 RefSeq:XP_002662342.2
UniGene:Dr.158633 Ensembl:ENSDART00000149896 GeneID:100318899
KEGG:dre:100318899 CTD:100318899 Uniprot:F8W4K3
Length = 1681
Score = 149 (57.5 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 50/180 (27%), Positives = 83/180 (46%)
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
V+Q + H +++ GQV++ G+ + + PI L E + V V AG
Sbjct: 40 VLQAALGARHGVLLVEGGQVYSFGE-LPWKQNQTSSAEPILEAVLSEQ-RVV---FVAAG 94
Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGH-G-DTLDRPTPKSIAPLE----EVGSVVQIAAGP 278
+G +T G VH G N HGQ G G + PTP + E + ++++A G
Sbjct: 95 SAHSGVVTEDGGVHMWGENVHGQCGLLGLSVIPNPTPVGVLDSEATPPQTVKILEVACGD 154
Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
+ LA++ V+++GSG L + +P+ + G HV++V+ G H VAL
Sbjct: 155 QHTLALSAKHEVWAWGSGCQLGL-NTSTFPVWKPQKVDHL--SGRHVLQVACGSAHSVAL 211
Score = 132 (51.5 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 48/142 (33%), Positives = 69/142 (48%)
Query: 198 RDTNRPIFRPRLVE-ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR 256
R T+RP R R V A G+P + A L +++ V + G GQLGHGD L R
Sbjct: 520 RRTSRP--RMRAVPLASGGIP--ETDAHLP-----SLQTEVWSWGQGQDGQLGHGDLLPR 570
Query: 257 PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
P + L V+++AAG + LA+T V+S+G ++ LGH E P+
Sbjct: 571 LQPDCVKSLNGK-EVLKVAAGAHHSLALTAQSQVFSWGCNTSGQLGHMESPTTF-PQL-- 626
Query: 317 TFRRKGIHVVRVSAGDEHVVAL 338
T GI V + AG +H + L
Sbjct: 627 TKLSDGIRVWDIGAGLQHTLLL 648
Score = 59 (25.8 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 18/68 (26%), Positives = 33/68 (48%)
Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
+++ G HTL +S V++ GS C LG T +++ S HV+QV+
Sbjct: 148 LEVACGDQHTLALSAKHEVWAWGSG-CQ-LGLNTSTFPVWKPQKVDHLSGRHVLQVACGS 205
Query: 173 NHAAFVLQ 180
H+ +++
Sbjct: 206 AHSVALVR 213
>RGD|1312048 [details] [associations]
symbol:Mycbp2 "MYC binding protein 2, E3 ubiquitin protein
ligase" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0008045
"motor neuron axon guidance" evidence=ISO] [GO:0015630 "microtubule
cytoskeleton" evidence=ISO] [GO:0021785 "branchiomotor neuron axon
guidance" evidence=ISO] [GO:0021952 "central nervous system
projection neuron axonogenesis" evidence=ISO] [GO:0030424 "axon"
evidence=ISO] [GO:0032880 "regulation of protein localization"
evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=ISO] [GO:0048667 "cell morphogenesis involved in neuron
differentiation" evidence=ISO] [GO:0051493 "regulation of
cytoskeleton organization" evidence=ISO] InterPro:IPR027047
RGD:1312048 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 InterPro:IPR014756 SUPFAM:SSF81296 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR012983 Pfam:PF08005
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194 EMBL:CH473951
PANTHER:PTHR12846 IPI:IPI00950595 UniGene:Rn.13538
Ensembl:ENSRNOT00000064927 UCSC:RGD:1312048 Uniprot:D4A722
Length = 2667
Score = 162 (62.1 bits), Expect = 8.2e-07, Sum P(2) = 8.2e-07
Identities = 45/115 (39%), Positives = 59/115 (51%)
Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
+ F VQVS +H+ ++++G V+T G GH D N P LV+AL G
Sbjct: 910 VRFDCEVRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGC-PTLVQALPG- 967
Query: 217 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGS 270
P QVTAG N T L + G V T GS + GQLG LD P + AP+ +GS
Sbjct: 968 PSTQVTAGSNHTAVLVMDGQVFTFGSFSKGQLGR-PILDVPYWNAKPAPMPNIGS 1021
Score = 131 (51.2 bits), Expect = 0.00012, P = 0.00012
Identities = 36/108 (33%), Positives = 52/108 (48%)
Query: 196 GHRDTNR-PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTL 254
G +D ++ + P V V QV+ G + + L G V+T G HGQLGHGD
Sbjct: 895 GEKDASKVTTYPPGSVRFDCEVRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVN 954
Query: 255 DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
R P + L G Q+ AG ++ + +G V++FGS S LG
Sbjct: 955 SRGCPTLVQALP--GPSTQVTAGSNHTAVLVMDGQVFTFGSFSKGQLG 1000
Score = 37 (18.1 bits), Expect = 8.2e-07, Sum P(2) = 8.2e-07
Identities = 6/22 (27%), Positives = 14/22 (63%)
Query: 278 PSYMLAVTGNGVVYSFGSGSNF 299
P+ +L + GN ++S + S++
Sbjct: 2046 PTMVLVLPGNEALFSLETASDY 2067
>UNIPROTKB|I3L8I2 [details] [associations]
symbol:LOC100737658 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA]
InterPro:IPR000719 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104137 Ensembl:ENSSSCT00000025619
Uniprot:I3L8I2
Length = 676
Score = 144 (55.7 bits), Expect = 8.9e-07, P = 8.9e-07
Identities = 46/164 (28%), Positives = 75/164 (45%)
Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ-VTAGLNFTGFLTIRGHVHT 239
+G G S R P+ +V+ G K VT L +
Sbjct: 292 AGPPLVPGSTGSRTSSARCRGLPMLNTEVVQVAAGRTQKAGVTRCLPLPAPSPVPSQAPP 351
Query: 240 CGSNTHGQLGHGDTLDRPTPKSIAP-LE-EVGSVVQ-IAAGPSYMLAVTGNGVVYSFGSG 296
G+ G L G +++P P+ ++ LE + G ++ +A G + +T G++ +FGSG
Sbjct: 352 LGAGG-GALLPG-AIEQPQPQFVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSG 409
Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
SN CLGHG +D QP ++ G +V+V+ G HV+AL +
Sbjct: 410 SNGCLGHGSLNDISQPTIVEALL--GYEMVQVACGASHVLALST 451
Score = 142 (55.0 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 63/263 (23%), Positives = 106/263 (40%)
Query: 93 VLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCV 152
V RFL+ + I + G++ + L + + GS G LGHG
Sbjct: 372 VSRFLEG-QSGVTIKHVACGDL------FTACLTDRGIIMTFGSGSNGCLGHG-SLNDIS 423
Query: 153 SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG--DNSSFCCGHRDTNRPIFRPRLV 210
T + +VQV+ +H + ++F G D G R+++ P+LV
Sbjct: 424 QPTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDGGRLGLGTRESH---CCPQLV 480
Query: 211 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTL---DRPTPKSIAPLEE 267
G ++V G++ + LT+ G CGSN +LG D L + P P +EE
Sbjct: 481 PMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGL-DPLSLGEEPAPHQ--QVEE 537
Query: 268 VGSVVQIAAGP---SYMLAV---TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 321
+ + + P +L+V T + + SG + G + P +Q +
Sbjct: 538 AVTFTPLGSAPLDQEPLLSVDLGTAHSAAVTXASGDCYTFGSNARRVSRAPCRVQGLQ-- 595
Query: 322 GIHVVRVSAGDEHVVALDSSGYV 344
GI + V+ GD VA+ + G V
Sbjct: 596 GIKISTVACGDAFTVAIGAEGEV 618
>RGD|1592835 [details] [associations]
symbol:Rcc1 "regulator of chromosome condensation 1"
species:10116 "Rattus norvegicus" [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=ISO] [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0000794 "condensed nuclear chromosome"
evidence=ISO] [GO:0003682 "chromatin binding" evidence=ISO]
[GO:0005087 "Ran guanyl-nucleotide exchange factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0007052 "mitotic spindle
organization" evidence=ISO] [GO:0007059 "chromosome segregation"
evidence=ISO] [GO:0007088 "regulation of mitosis" evidence=ISO]
[GO:0007090 "regulation of S phase of mitotic cell cycle"
evidence=ISO] [GO:0031492 "nucleosomal DNA binding" evidence=ISO]
[GO:0031965 "nuclear membrane" evidence=ISO] [GO:0042393 "histone
binding" evidence=ISO] [GO:0050790 "regulation of catalytic
activity" evidence=ISO] [GO:0051225 "spindle assembly"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO] RGD:1592835
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 EMBL:CH473968 KO:K11493 CTD:1104
HOVERGEN:HBG017712 EMBL:BC160834 IPI:IPI00896784
RefSeq:NP_001121661.1 UniGene:Rn.217123 SMR:B1H227 GeneID:682908
KEGG:rno:682908 NextBio:724000 Genevestigator:B1H227 Uniprot:B1H227
Length = 421
Score = 141 (54.7 bits), Expect = 9.0e-07, P = 9.0e-07
Identities = 56/178 (31%), Positives = 85/178 (47%)
Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
V + G G LG G + + P VVQ A H + QSGQV++ G N
Sbjct: 37 VLTLGQGDVGQLGLGESVLERKKPALV--PLLQDVVQAEAGGMHTVCLSQSGQVYSFGCN 94
Query: 191 SSFCCGHRDTN--RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS--NTHG 246
G RDT+ P VE + V QV+AG + T LT G V GS + +G
Sbjct: 95 DEGALG-RDTSVEGSEMVPGKVELQEKVV--QVSAGDSHTAALTEDGRVFLWGSFRDNNG 151
Query: 247 QLGHGDTLDRPTPKSIAPLE-EVGS-VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
+G L P KS+ P++ ++ + VV++A+G +++ +T +G +Y+ G G LG
Sbjct: 152 VIG----LLEPMKKSMVPVQVQLDTQVVKVASGNDHLVMLTTDGDLYTLGCGEQGQLG 205
Score = 139 (54.0 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 70/260 (26%), Positives = 110/260 (42%)
Query: 105 DIVETSAGNMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGP--ETTQCVSFTRINFPS 161
D+V+ AG M HT+ +S S V+S G + G LG E ++ V ++
Sbjct: 68 DVVQAEAGGM-------HTVCLSQSGQVYSFGCNDEGALGRDTSVEGSEMVP-GKVELQE 119
Query: 162 AAHVVQVSASENHAAFVLQSGQVFTCG---DNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
VVQVSA ++H A + + G+VF G DN+ G + + P V+
Sbjct: 120 K--VVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVI-GLLEPMKKSMVP--VQVQLDTQV 174
Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH--------GDT--LDRP-TPKSIAPLEE 267
+V +G + LT G ++T G GQLG G L+R P+ + L+
Sbjct: 175 VKVASGNDHLVMLTTDGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPRCVL-LKS 233
Query: 268 VGSVVQIA-----AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
G+ ++ G + A++ G VY FG + LG P+ + +F+
Sbjct: 234 RGTRGRVRFQDAFCGAYFTFAISREGHVYGFGLSNYHQLGTPGTGSCFIPQNLTSFKNST 293
Query: 323 IHVVRVSAGDEHVVALDSSG 342
V S G H V +DS G
Sbjct: 294 KSWVGFSGGQHHTVCMDSEG 313
Score = 138 (53.6 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 43/115 (37%), Positives = 60/115 (52%)
Query: 235 GHVHTCGSNTHGQLGHGDT-LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
G V T G GQLG G++ L+R P ++ PL + VVQ AG + + ++ +G VYSF
Sbjct: 35 GLVLTLGQGDVGQLGLGESVLERKKP-ALVPLLQ--DVVQAEAGGMHTVCLSQSGQVYSF 91
Query: 294 GSGSNFCLGHGE--QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSL 346
G LG + E+ P ++ + K VV+VSAGD H AL G V L
Sbjct: 92 GCNDEGALGRDTSVEGSEMVPGKVE-LQEK---VVQVSAGDSHTAALTEDGRVFL 142
Score = 132 (51.5 bits), Expect = 9.3e-06, P = 9.3e-06
Identities = 45/164 (27%), Positives = 79/164 (48%)
Query: 178 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV--TAGLNFTGFLTIRG 235
+ + G V+ G ++ G T F P+ + + K V + G + T + G
Sbjct: 255 ISREGHVYGFGLSNYHQLGTPGTGS-CFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEG 313
Query: 236 HVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
++ G +G+LG G+ + + P I+ L V SV A G S AV+ +G V+++G
Sbjct: 314 KAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPVVSSV---ACGASVGYAVSKDGRVFAWG 370
Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
G+N+ LG G++ D P + + + V+ VS+G +H V L
Sbjct: 371 MGTNYQLGTGQEDDAWSPVEMTGKQLENREVLTVSSGGQHTVLL 414
>UNIPROTKB|F1NZF2 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0015630 "microtubule cytoskeleton" evidence=IEA] [GO:0021785
"branchiomotor neuron axon guidance" evidence=IEA] [GO:0021952
"central nervous system projection neuron axonogenesis"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0032880
"regulation of protein localization" evidence=IEA] [GO:0042803
"protein homodimerization activity" evidence=IEA] [GO:0051493
"regulation of cytoskeleton organization" evidence=IEA]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0015630 GO:GO:0046872 GO:GO:0030424
GO:GO:0008270 GO:GO:0032880 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633 PROSITE:PS50012
InterPro:IPR004939 PROSITE:PS51284 InterPro:IPR012983 Pfam:PF08005
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194
GeneTree:ENSGT00390000011403 PANTHER:PTHR12846 OMA:LLSILHW
EMBL:AC149787 EMBL:AADN02042674 IPI:IPI00599046
Ensembl:ENSGALT00000027346 Uniprot:F1NZF2
Length = 4580
Score = 164 (62.8 bits), Expect = 9.3e-07, Sum P(2) = 9.3e-07
Identities = 45/115 (39%), Positives = 59/115 (51%)
Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
+ F VQVS +H+ ++++G V+T G GH D N P LV+AL G
Sbjct: 834 VRFDCELRAVQVSCGFHHSVILMENGDVYTFGYGQHGQLGHGDVNSRGC-PTLVQALPG- 891
Query: 217 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGS 270
P QVTAG N T L + G V T GS + GQLG LD P + AP+ +GS
Sbjct: 892 PSTQVTAGSNHTAILLMDGQVFTFGSFSKGQLGR-PILDMPYWNAKPAPMPNIGS 945
Score = 128 (50.1 bits), Expect = 0.00046, P = 0.00046
Identities = 35/108 (32%), Positives = 52/108 (48%)
Query: 196 GHRDTNR-PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTL 254
G +D ++ + P V + QV+ G + + L G V+T G HGQLGHGD
Sbjct: 819 GEKDASKITTYPPGAVRFDCELRAVQVSCGFHHSVILMENGDVYTFGYGQHGQLGHGDVN 878
Query: 255 DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
R P + L G Q+ AG ++ + +G V++FGS S LG
Sbjct: 879 SRGCPTLVQALP--GPSTQVTAGSNHTAILLMDGQVFTFGSFSKGQLG 924
Score = 39 (18.8 bits), Expect = 9.3e-07, Sum P(2) = 9.3e-07
Identities = 11/47 (23%), Positives = 26/47 (55%)
Query: 259 PKSIAPLEEVGSVVQI-----AAG-PSYMLAVTGNGVVYSFGSGSNF 299
PK + E + S +++ ++G P+ +L + GN ++S + S++
Sbjct: 1981 PKHASVHENLNSWIELKKFSGSSGWPTMVLVLPGNEALFSLETASDY 2027
>UNIPROTKB|E1BH40 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051493 "regulation of cytoskeleton organization"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0032880 "regulation of protein localization"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0021952 "central
nervous system projection neuron axonogenesis" evidence=IEA]
[GO:0021785 "branchiomotor neuron axon guidance" evidence=IEA]
[GO:0015630 "microtubule cytoskeleton" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] InterPro:IPR001841
InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0015630 GO:GO:0046872 GO:GO:0030424
GO:GO:0008270 GO:GO:0032880 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0021952 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 KO:K10693
PANTHER:PTHR12846 CTD:23077 GO:GO:0021785 OMA:LLSILHW
EMBL:DAAA02033607 EMBL:DAAA02033608 EMBL:DAAA02033609
EMBL:DAAA02033610 IPI:IPI00705654 RefSeq:NP_001179746.1
UniGene:Bt.105085 Ensembl:ENSBTAT00000025100 GeneID:534496
KEGG:bta:534496 NextBio:20876421 Uniprot:E1BH40
Length = 4640
Score = 159 (61.0 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 45/115 (39%), Positives = 59/115 (51%)
Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
+ F VQVS +H+ ++++G V+T G GH D N P LV+AL G
Sbjct: 896 VRFDCELRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGC-PTLVQALPG- 953
Query: 217 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGS 270
P QVTAG N T L + G V T GS + GQLG LD P + AP+ +GS
Sbjct: 954 PSTQVTAGSNHTAALLMDGQVFTFGSFSKGQLGR-PILDVPYWNAKPAPMPNIGS 1007
Score = 131 (51.2 bits), Expect = 0.00022, P = 0.00022
Identities = 32/83 (38%), Positives = 44/83 (53%)
Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
QV+ G + + L G V+T G HGQLGHGD R P + L G Q+ AG +
Sbjct: 906 QVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALP--GPSTQVTAGSN 963
Query: 280 YMLAVTGNGVVYSFGSGSNFCLG 302
+ A+ +G V++FGS S LG
Sbjct: 964 HTAALLMDGQVFTFGSFSKGQLG 986
Score = 41 (19.5 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 12/47 (25%), Positives = 26/47 (55%)
Query: 259 PKSIAPLEEVGSVVQI-----AAG-PSYMLAVTGNGVVYSFGSGSNF 299
PK A E + S +++ ++G P+ +L + GN ++S + S++
Sbjct: 2043 PKLTAVHENLNSWIELKKFSGSSGWPTMVLVLPGNEALFSLETASDY 2089
>UNIPROTKB|D4A2D3 [details] [associations]
symbol:Mycbp2 "Protein Mycbp2" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 RGD:1312048 INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0015630 GO:GO:0046872
GO:GO:0030424 GO:GO:0008270 GO:GO:0032880 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0021952 Gene3D:3.30.40.10
InterPro:IPR014756 InterPro:IPR013083 SUPFAM:SSF81296
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 PANTHER:PTHR12846
OrthoDB:EOG4VQ9NB GO:GO:0021785 IPI:IPI00765932
ProteinModelPortal:D4A2D3 Ensembl:ENSRNOT00000014583
ArrayExpress:D4A2D3 Uniprot:D4A2D3
Length = 4715
Score = 162 (62.1 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 45/115 (39%), Positives = 59/115 (51%)
Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
+ F VQVS +H+ ++++G V+T G GH D N P LV+AL G
Sbjct: 896 VRFDCEVRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGC-PTLVQALPG- 953
Query: 217 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGS 270
P QVTAG N T L + G V T GS + GQLG LD P + AP+ +GS
Sbjct: 954 PSTQVTAGSNHTAVLVMDGQVFTFGSFSKGQLGR-PILDVPYWNAKPAPMPNIGS 1007
Score = 131 (51.2 bits), Expect = 0.00022, P = 0.00022
Identities = 36/108 (33%), Positives = 52/108 (48%)
Query: 196 GHRDTNR-PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTL 254
G +D ++ + P V V QV+ G + + L G V+T G HGQLGHGD
Sbjct: 881 GEKDASKVTTYPPGSVRFDCEVRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVN 940
Query: 255 DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
R P + L G Q+ AG ++ + +G V++FGS S LG
Sbjct: 941 SRGCPTLVQALP--GPSTQVTAGSNHTAVLVMDGQVFTFGSFSKGQLG 986
Score = 37 (18.1 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 6/22 (27%), Positives = 14/22 (63%)
Query: 278 PSYMLAVTGNGVVYSFGSGSNF 299
P+ +L + GN ++S + S++
Sbjct: 2065 PTMVLVLPGNEALFSLETASDY 2086
>POMBASE|SPAC10F6.04 [details] [associations]
symbol:SPAC10F6.04 "RCC domain protein Ats1 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0006400 "tRNA modification"
evidence=ISO] [GO:0007017 "microtubule-based process" evidence=ISO]
PomBase:SPAC10F6.04 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829
GO:GO:0005634 EMBL:CU329670 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0006400 GO:GO:0007017 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
KO:K15462 OrthoDB:EOG4H75MP PIR:T37498 RefSeq:NP_593255.1
ProteinModelPortal:O42645 STRING:O42645 EnsemblFungi:SPAC10F6.04.1
GeneID:2542973 KEGG:spo:SPAC10F6.04 OMA:WIVIEEN NextBio:20804007
Uniprot:O42645
Length = 351
Score = 135 (52.6 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 39/147 (26%), Positives = 70/147 (47%)
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK---GVPCKQ- 220
+ ++S NH + + Q++ CGDN CG+ + P++ P + L+ V ++
Sbjct: 33 IEKISCGGNHTLLLDEDSQLWACGDNRKGQCGY-EVKEPLYNPLSPDYLRIFTRVSHERW 91
Query: 221 --VTAGLNFTGFLTI-RGHVHTCGSNTHGQLGHGDTLDRPTPKSI-AP-LEEVGSVVQIA 275
+T G F+ + R V +CG G+LG G+ + + I P L++ ++ I+
Sbjct: 92 VFLTCGWEFSVIVHADRRRVCSCGEGLSGELGQGNRSNSQGLREIDIPYLDDKEFIIDIS 151
Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLG 302
AG + + VT G +Y G G LG
Sbjct: 152 AGLRHWICVTNEGNLYGCGDGRKGQLG 178
>UNIPROTKB|F1RP77 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051493 "regulation of cytoskeleton organization"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0032880 "regulation of protein localization"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0021952 "central
nervous system projection neuron axonogenesis" evidence=IEA]
[GO:0021785 "branchiomotor neuron axon guidance" evidence=IEA]
[GO:0015630 "microtubule cytoskeleton" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] InterPro:IPR001841
InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0015630 GO:GO:0046872 GO:GO:0030424
GO:GO:0008270 GO:GO:0032880 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0021952 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 PANTHER:PTHR12846
GO:GO:0021785 OMA:LLSILHW EMBL:CU457401 EMBL:CT978653 EMBL:CU041349
Ensembl:ENSSSCT00000010386 Uniprot:F1RP77
Length = 4460
Score = 160 (61.4 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 45/115 (39%), Positives = 59/115 (51%)
Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
+ F VQVS +H+ ++++G V+T G GH D N P LV+AL G
Sbjct: 809 VRFDCELRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGC-PTLVQALPG- 866
Query: 217 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGS 270
P QVTAG N T L + G V T GS + GQLG LD P + AP+ +GS
Sbjct: 867 PSTQVTAGSNHTAVLLMDGQVFTFGSFSKGQLGR-PILDVPYWNAKPAPMPNIGS 920
Score = 127 (49.8 bits), Expect = 0.00058, P = 0.00058
Identities = 31/83 (37%), Positives = 43/83 (51%)
Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
QV+ G + + L G V+T G HGQLGHGD R P + L G Q+ AG +
Sbjct: 819 QVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALP--GPSTQVTAGSN 876
Query: 280 YMLAVTGNGVVYSFGSGSNFCLG 302
+ + +G V++FGS S LG
Sbjct: 877 HTAVLLMDGQVFTFGSFSKGQLG 899
Score = 38 (18.4 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 11/47 (23%), Positives = 26/47 (55%)
Query: 259 PKSIAPLEEVGSVVQI-----AAG-PSYMLAVTGNGVVYSFGSGSNF 299
PK + E + S +++ ++G P+ +L + GN ++S + S++
Sbjct: 1956 PKLTSVHENLNSWIELKKFSGSSGWPTMVLVLPGNEALFSLETASDY 2002
>UNIPROTKB|F1PB36 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0046872 GO:GO:0008270 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR014756 InterPro:IPR013083 SUPFAM:SSF81296
InterPro:IPR008979 SUPFAM:SSF49785 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 PANTHER:PTHR12846
EMBL:AAEX03013255 EMBL:AAEX03013256 EMBL:AAEX03013257
Ensembl:ENSCAFT00000008311 Uniprot:F1PB36
Length = 4640
Score = 160 (61.4 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 45/115 (39%), Positives = 59/115 (51%)
Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
+ F VQVS +H+ ++++G V+T G GH D N P LV+AL G
Sbjct: 896 VRFDCELRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGC-PTLVQALPG- 953
Query: 217 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGS 270
P QVTAG N T L + G V T GS + GQLG LD P + AP+ +GS
Sbjct: 954 PSTQVTAGSNHTAVLLMDGQVFTFGSFSKGQLGR-PILDVPYWNAKPAPMPNIGS 1007
Score = 127 (49.8 bits), Expect = 0.00060, P = 0.00060
Identities = 31/83 (37%), Positives = 43/83 (51%)
Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
QV+ G + + L G V+T G HGQLGHGD R P + L G Q+ AG +
Sbjct: 906 QVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALP--GPSTQVTAGSN 963
Query: 280 YMLAVTGNGVVYSFGSGSNFCLG 302
+ + +G V++FGS S LG
Sbjct: 964 HTAVLLMDGQVFTFGSFSKGQLG 986
Score = 38 (18.4 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 11/47 (23%), Positives = 26/47 (55%)
Query: 259 PKSIAPLEEVGSVVQI-----AAG-PSYMLAVTGNGVVYSFGSGSNF 299
PK + E + S +++ ++G P+ +L + GN ++S + S++
Sbjct: 2043 PKLTSVHENLNSWIELKKFSGSSGWPTMVLVLPGNEALFSLETASDY 2089
>UNIPROTKB|O75592 [details] [associations]
symbol:MYCBP2 "Probable E3 ubiquitin-protein ligase MYCBP2"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0015630 "microtubule cytoskeleton"
evidence=IEA] [GO:0021785 "branchiomotor neuron axon guidance"
evidence=IEA] [GO:0021952 "central nervous system projection neuron
axonogenesis" evidence=IEA] [GO:0030424 "axon" evidence=IEA]
[GO:0032880 "regulation of protein localization" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0051493 "regulation of cytoskeleton organization" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001841
InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415
Prosite:PS00518 GO:GO:0005634 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0015630 GO:GO:0006355 GO:GO:0046872 GO:GO:0016874
GO:GO:0030424 GO:GO:0008270 GO:GO:0032880 GO:GO:0006351
GO:GO:0016567 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0021952 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 CleanEx:HS_PAM InterPro:IPR004939
PROSITE:PS51284 InterPro:IPR012983 Pfam:PF08005 EMBL:AC001226
InterPro:IPR017868 EMBL:CH471093 PROSITE:PS50194 KO:K10693
PANTHER:PTHR12846 EMBL:AF075587 EMBL:AL159154 EMBL:AL159158
EMBL:AL359257 EMBL:AB020723 EMBL:BC037971 EMBL:AF083244
IPI:IPI00289776 IPI:IPI01014189 RefSeq:NP_055872.4
UniGene:Hs.591221 ProteinModelPortal:O75592 SMR:O75592
DIP:DIP-28142N IntAct:O75592 MINT:MINT-1632199 STRING:O75592
PhosphoSite:O75592 PaxDb:O75592 PRIDE:O75592
Ensembl:ENST00000357337 Ensembl:ENST00000544440 GeneID:23077
KEGG:hsa:23077 UCSC:uc010aev.3 CTD:23077 GeneCards:GC13M077618
HGNC:HGNC:23386 HPA:HPA039945 MIM:610392 neXtProt:NX_O75592
PharmGKB:PA134871126 eggNOG:NOG240798 HOVERGEN:HBG053153
InParanoid:O75592 OrthoDB:EOG4VQ9NB ChiTaRS:MYCBP2 GenomeRNAi:23077
NextBio:44191 ArrayExpress:O75592 Bgee:O75592 CleanEx:HS_MYCBP2
Genevestigator:O75592 GermOnline:ENSG00000005810 GO:GO:0021785
Uniprot:O75592
Length = 4640
Score = 160 (61.4 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 45/115 (39%), Positives = 59/115 (51%)
Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
+ F VQVS +H+ ++++G V+T G GH D N P LV+AL G
Sbjct: 896 VRFDCELRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGC-PTLVQALPG- 953
Query: 217 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGS 270
P QVTAG N T L + G V T GS + GQLG LD P + AP+ +GS
Sbjct: 954 PSTQVTAGSNHTAVLLMDGQVFTFGSFSKGQLGR-PILDVPYWNAKPAPMPNIGS 1007
Score = 127 (49.8 bits), Expect = 0.00060, P = 0.00060
Identities = 31/83 (37%), Positives = 43/83 (51%)
Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
QV+ G + + L G V+T G HGQLGHGD R P + L G Q+ AG +
Sbjct: 906 QVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALP--GPSTQVTAGSN 963
Query: 280 YMLAVTGNGVVYSFGSGSNFCLG 302
+ + +G V++FGS S LG
Sbjct: 964 HTAVLLMDGQVFTFGSFSKGQLG 986
Score = 38 (18.4 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 11/47 (23%), Positives = 26/47 (55%)
Query: 259 PKSIAPLEEVGSVVQI-----AAG-PSYMLAVTGNGVVYSFGSGSNF 299
PK + E + S +++ ++G P+ +L + GN ++S + S++
Sbjct: 2043 PKLTSVHENLNSWIELKKFSGSSGWPTMVLVLPGNEALFSLETASDY 2089
>UNIPROTKB|J3KPZ3 [details] [associations]
symbol:MYCBP2 "Probable E3 ubiquitin-protein ligase MYCBP2"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872 GO:GO:0008270
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.30.40.10 InterPro:IPR014756 InterPro:IPR013083
SUPFAM:SSF81296 InterPro:IPR008979 SUPFAM:SSF49785 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 EMBL:AC001226 InterPro:IPR017868
PROSITE:PS50194 KO:K10693 PANTHER:PTHR12846 EMBL:AL159154
EMBL:AL159158 EMBL:AL359257 RefSeq:NP_055872.4 UniGene:Hs.591221
GeneID:23077 KEGG:hsa:23077 CTD:23077 HGNC:HGNC:23386
ChiTaRS:MYCBP2 OMA:LLSILHW ProteinModelPortal:J3KPZ3
Ensembl:ENST00000407578 Uniprot:J3KPZ3
Length = 4678
Score = 160 (61.4 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 45/115 (39%), Positives = 59/115 (51%)
Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
+ F VQVS +H+ ++++G V+T G GH D N P LV+AL G
Sbjct: 934 VRFDCELRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGC-PTLVQALPG- 991
Query: 217 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGS 270
P QVTAG N T L + G V T GS + GQLG LD P + AP+ +GS
Sbjct: 992 PSTQVTAGSNHTAVLLMDGQVFTFGSFSKGQLGR-PILDVPYWNAKPAPMPNIGS 1045
Score = 127 (49.8 bits), Expect = 0.00061, P = 0.00061
Identities = 31/83 (37%), Positives = 43/83 (51%)
Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
QV+ G + + L G V+T G HGQLGHGD R P + L G Q+ AG +
Sbjct: 944 QVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALP--GPSTQVTAGSN 1001
Query: 280 YMLAVTGNGVVYSFGSGSNFCLG 302
+ + +G V++FGS S LG
Sbjct: 1002 HTAVLLMDGQVFTFGSFSKGQLG 1024
Score = 38 (18.4 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 11/47 (23%), Positives = 26/47 (55%)
Query: 259 PKSIAPLEEVGSVVQI-----AAG-PSYMLAVTGNGVVYSFGSGSNF 299
PK + E + S +++ ++G P+ +L + GN ++S + S++
Sbjct: 2081 PKLTSVHENLNSWIELKKFSGSSGWPTMVLVLPGNEALFSLETASDY 2127
>ZFIN|ZDB-GENE-030616-132 [details] [associations]
symbol:mycbp2 "MYC binding protein 2" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0021986 "habenula
development" evidence=IMP] [GO:0016198 "axon choice point
recognition" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0007411 "axon guidance" evidence=IMP] [GO:0031290 "retinal
ganglion cell axon guidance" evidence=IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0042068 "regulation of pteridine
metabolic process" evidence=IMP] InterPro:IPR001841
InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-030616-132
GO:GO:0005737 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872
GO:GO:0008270 GO:GO:0016198 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284 GO:GO:0031290
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 PANTHER:PTHR12846
GO:GO:0021986 EMBL:BX510646 EMBL:AL840634 EMBL:CR628366
EMBL:CU138551 IPI:IPI00993071 Ensembl:ENSDART00000124901
ArrayExpress:F1QI76 Bgee:F1QI76 GO:GO:0042068 Uniprot:F1QI76
Length = 4648
Score = 158 (60.7 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 43/115 (37%), Positives = 59/115 (51%)
Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
+ F VQVS +H+ ++++G V+T G GH D N P LV+AL G
Sbjct: 919 VRFDCELRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSR-GSPTLVQALPG- 976
Query: 217 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGS 270
P QVTAG N T L + G V T GS + GQLG LD P + +P+ +G+
Sbjct: 977 PSTQVTAGSNHTAVLLMDGQVFTFGSFSKGQLGR-PILDMPYWNAKPSPMPNIGA 1030
Score = 129 (50.5 bits), Expect = 0.00037, P = 0.00037
Identities = 31/83 (37%), Positives = 44/83 (53%)
Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
QV+ G + + L G V+T G HGQLGHGD R +P + L G Q+ AG +
Sbjct: 929 QVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGSPTLVQALP--GPSTQVTAGSN 986
Query: 280 YMLAVTGNGVVYSFGSGSNFCLG 302
+ + +G V++FGS S LG
Sbjct: 987 HTAVLLMDGQVFTFGSFSKGQLG 1009
Score = 40 (19.1 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 13/44 (29%), Positives = 17/44 (38%)
Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR 320
G ++ LA G Y L HG Q P ++Q F R
Sbjct: 2635 GEAWSLARDRGGNQYLRHVEEQAVLEHGAQTPPPSPFSVQAFNR 2678
>UNIPROTKB|J9PB77 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0046872 GO:GO:0008270 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR014756 InterPro:IPR013083 SUPFAM:SSF81296
InterPro:IPR008979 SUPFAM:SSF49785 PROSITE:PS00626 PROSITE:PS50012
InterPro:IPR004939 PROSITE:PS51284 InterPro:IPR012983 Pfam:PF08005
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194
GeneTree:ENSGT00390000011403 PANTHER:PTHR12846 OMA:LLSILHW
EMBL:AAEX03013255 EMBL:AAEX03013256 EMBL:AAEX03013257
Ensembl:ENSCAFT00000044597 Uniprot:J9PB77
Length = 4727
Score = 160 (61.4 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 45/115 (39%), Positives = 59/115 (51%)
Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
+ F VQVS +H+ ++++G V+T G GH D N P LV+AL G
Sbjct: 934 VRFDCELRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGC-PTLVQALPG- 991
Query: 217 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGS 270
P QVTAG N T L + G V T GS + GQLG LD P + AP+ +GS
Sbjct: 992 PSTQVTAGSNHTAVLLMDGQVFTFGSFSKGQLGR-PILDVPYWNAKPAPMPNIGS 1045
Score = 127 (49.8 bits), Expect = 0.00061, P = 0.00061
Identities = 31/83 (37%), Positives = 43/83 (51%)
Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
QV+ G + + L G V+T G HGQLGHGD R P + L G Q+ AG +
Sbjct: 944 QVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALP--GPSTQVTAGSN 1001
Query: 280 YMLAVTGNGVVYSFGSGSNFCLG 302
+ + +G V++FGS S LG
Sbjct: 1002 HTAVLLMDGQVFTFGSFSKGQLG 1024
Score = 38 (18.4 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 11/47 (23%), Positives = 26/47 (55%)
Query: 259 PKSIAPLEEVGSVVQI-----AAG-PSYMLAVTGNGVVYSFGSGSNF 299
PK + E + S +++ ++G P+ +L + GN ++S + S++
Sbjct: 2081 PKLTSVHENLNSWIELKKFSGSSGWPTMVLVLPGNEALFSLETASDY 2127
>UNIPROTKB|F1P3N0 [details] [associations]
symbol:WBSCR16 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005739 "mitochondrion" evidence=IEA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104312 OMA:MVTLAKS EMBL:AADN02026016
EMBL:AADN02026017 IPI:IPI00579944 Ensembl:ENSGALT00000001779
Uniprot:F1P3N0
Length = 454
Score = 136 (52.9 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 43/141 (30%), Positives = 66/141 (46%)
Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPC 218
P V+QVS H+ + S VFT G+NS CG + I+ L+ L
Sbjct: 162 PQKTRVLQVSCGRAHSLVLTDSEGVFTMGNNSYGQCGRKVVEDEIYSESHLIHQLNDFDS 221
Query: 219 K--QVTAGLNFTGFLTIRGHVHTCGSNTHGQ--LGHGDTLDRPTPKSIAPLEEVGSVVQI 274
+ QV G + + F T +G V CG GQ LGH + PT K + V ++VQ+
Sbjct: 222 RVVQVVCGQDHSLFRTKKGAVFACGWGADGQTGLGHYNITSVPT-KLGGDIAGV-NIVQV 279
Query: 275 AAGPSYMLAVTGNGVVYSFGS 295
++ LAV+ G ++ +G+
Sbjct: 280 SSYGDCCLAVSDEGDLFGWGN 300
Score = 136 (52.9 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 63/238 (26%), Positives = 99/238 (41%)
Query: 114 MQITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA-HVVQVSAS 171
+Q+ G+ H+L +VF+CG G G G V T++ A ++VQVS+
Sbjct: 224 VQVVCGQDHSLFRTKKGAVFACGWGADGQTGLGHYNITSVP-TKLGGDIAGVNIVQVSSY 282
Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
+ V G +F G++ + PR + G K+ G L
Sbjct: 283 GDCCLAVSDEGDLFGWGNSEYLQLASVTETTQVNVPRHLPFKIG-KIKEAACGGTGNIVL 341
Query: 232 TIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPL----EEVGSVVQIA---AGPSYMLA 283
T G V G +G LG G L + P+ I P + S V++A G S+ A
Sbjct: 342 TEEGAVFVWG---YGILGKGPNLTETAVPEMIPPSLFGWSDFSSDVRVARVRCGLSHFAA 398
Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
+T G ++ +G CLG G D+ P + G VV V+ G +H+V++ S
Sbjct: 399 LTNRGELFVWGKNLRGCLGIGRMEDQYFPWRVTI---PG-EVVDVACGVDHMVSMVKS 452
Score = 135 (52.6 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 62/243 (25%), Positives = 107/243 (44%)
Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRI-----NFPSAAHVVQ 167
+Q++ GR H+L++++S VF+ G++ G G + S + + +F S VVQ
Sbjct: 168 LQVSCGRAHSLVLTDSEGVFTMGNNSYGQCGRKVVEDEIYSESHLIHQLNDFDS--RVVQ 225
Query: 168 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
V ++H+ F + G VF CG + G N +L + GV QV++ +
Sbjct: 226 VVCGQDHSLFRTKKGAVFACGWGADGQTGLGHYNITSVPTKLGGDIAGVNIVQVSSYGDC 285
Query: 228 TGFLTIRGHVHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
++ G + G++ + QL +T P+ + P + +G + + A G + + +T
Sbjct: 286 CLAVSDEGDLFGWGNSEYLQLASVTETTQVNVPRHL-PFK-IGKIKEAACGGTGNIVLTE 343
Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQ-PRAI--QTFR----RKGIHVVRVSAGDEHVVALD 339
G V+ +G G LG G E P I F + V RV G H AL
Sbjct: 344 EGAVFVWGYG---ILGKGPNLTETAVPEMIPPSLFGWSDFSSDVRVARVRCGLSHFAALT 400
Query: 340 SSG 342
+ G
Sbjct: 401 NRG 403
>DICTYBASE|DDB_G0284187 [details] [associations]
symbol:Dd5P2 "inositol 5-phosphatase" species:44689
"Dictyostelium discoideum" [GO:0046856 "phosphatidylinositol
dephosphorylation" evidence=IDA] [GO:0046855 "inositol phosphate
dephosphorylation" evidence=IDA] [GO:0034485
"phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity"
evidence=IDA] [GO:0004445 "inositol-polyphosphate 5-phosphatase
activity" evidence=IDA] [GO:0004439
"phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity"
evidence=IDA] [GO:0046854 "phosphatidylinositol phosphorylation"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR000300 SMART:SM00128 dictyBase:DDB_G0284187
INTERPRO:IPR000408 Pfam:PF00415 GenomeReviews:CM000153_GR
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR005135
SUPFAM:SSF56219 EMBL:AAFI02000064 GO:GO:0046854 GO:GO:0046855
GO:GO:0004439 GO:GO:0046856 GO:GO:0004445 eggNOG:COG5411
GO:GO:0034485 RefSeq:XP_638694.1 ProteinModelPortal:Q54PV1
EnsemblProtists:DDB0191414 GeneID:8624525 KEGG:ddi:DDB_G0284187
InParanoid:Q54PV1 OMA:SHEKMER Uniprot:Q54PV1
Length = 1800
Score = 143 (55.4 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 30/80 (37%), Positives = 48/80 (60%)
Query: 226 NF-TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
NF + LT+ G + GSN +GQLG GD+LD+ PK++ E + ++A G ++ + +
Sbjct: 279 NFHSALLTLEGDLFLWGSNQYGQLGQGDSLDQSVPKTVKGSLEFVKINRMALGNNHTILL 338
Query: 285 TGNGVVYSFGSGSNFCLGHG 304
T V++FGS + LGHG
Sbjct: 339 TKEQDVFTFGSNEFYQLGHG 358
>TAIR|locus:2076532 [details] [associations]
symbol:AT3G02300 "AT3G02300" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0008536
"Ran GTPase binding" evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415
EMBL:CP002686 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 IPI:IPI00534317
RefSeq:NP_186879.2 UniGene:At.41157 ProteinModelPortal:F4J609
SMR:F4J609 EnsemblPlants:AT3G02300.1 GeneID:821167
KEGG:ath:AT3G02300 OMA:LKELCEF Uniprot:F4J609
Length = 471
Score = 136 (52.9 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 65/249 (26%), Positives = 103/249 (41%)
Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSA-AH 164
+ I+ GR HT + S+ S+F+ G++ G LG G P+ + + + F S A
Sbjct: 64 LDISCGREHTAAVASDGSLFAWGANEYGQLGDGTEVGRKHPKKVKQLQSEFVKFVSCGAF 123
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
A L + +++ G N +N P A + +QV+ G
Sbjct: 124 CTAAIAEPRENDGTLSTSRLWVWGQNQG-------SNLPRLFSGAFPATTAI--RQVSCG 174
Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDT---LDRPT-----PKSIAPLEEVGSVVQIAA 276
L+ G + G N GQLG G T L P K + E+ ++Q++
Sbjct: 175 TAHVVALSEEGLLQAWGYNEQGQLGRGVTCEGLQAPRVINAYAKFLDEAPELVKIMQLSC 234
Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHG--EQHD-ELQPRAIQTFRRKGIHVVRVSAGDE 333
G + A++ G VY++G GS LGH + D EL PR + G+ + V+ G
Sbjct: 235 GEYHTAALSDAGEVYTWGLGSMGQLGHVSLQSGDKELIPRRVVGL--DGVSMKEVACGGV 292
Query: 334 HVVALDSSG 342
H AL G
Sbjct: 293 HTCALSLEG 301
Score = 126 (49.4 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 45/159 (28%), Positives = 72/159 (45%)
Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV-------- 210
FP+ + QVS H + + G + G N G T + PR++
Sbjct: 162 FPATTAIRQVSCGTAHVVALSEEGLLQAWGYNEQGQLGRGVTCEGLQAPRVINAYAKFLD 221
Query: 211 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTL--DRPT-PKSIAPLEE 267
EA + V Q++ G T L+ G V+T G + GQLGH D+ P+ + L+
Sbjct: 222 EAPELVKIMQLSCGEYHTAALSDAGEVYTWGLGSMGQLGHVSLQSGDKELIPRRVVGLDG 281
Query: 268 VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
V S+ ++A G + A++ G +Y++G G LG G Q
Sbjct: 282 V-SMKEVACGGVHTCALSLEGALYAWGGGQAGQLGLGPQ 319
Score = 122 (48.0 bits), Expect = 0.00014, P = 0.00014
Identities = 43/150 (28%), Positives = 68/150 (45%)
Query: 115 QITTGRYHTLLISNSSVFSC-GSSLCGVLGHGPETTQCVSFTRI-----NF----PSAAH 164
Q++ G H + +S + G + G LG G T + + R+ F P
Sbjct: 170 QVSCGTAHVVALSEEGLLQAWGYNEQGQLGRGV-TCEGLQAPRVINAYAKFLDEAPELVK 228
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQV 221
++Q+S E H A + +G+V+T G S GH + ++ + PR V L GV K+V
Sbjct: 229 IMQLSCGEYHTAALSDAGEVYTWGLGSMGQLGHVSLQSGDKELI-PRRVVGLDGVSMKEV 287
Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHG 251
G T L++ G ++ G GQLG G
Sbjct: 288 ACGGVHTCALSLEGALYAWGGGQAGQLGLG 317
>UNIPROTKB|C9J3R0 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341
IPI:IPI00926548 ProteinModelPortal:C9J3R0 SMR:C9J3R0 STRING:C9J3R0
PRIDE:C9J3R0 Ensembl:ENST00000434290 ArrayExpress:C9J3R0
Bgee:C9J3R0 Uniprot:C9J3R0
Length = 273
Score = 131 (51.2 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 41/115 (35%), Positives = 58/115 (50%)
Query: 235 GHVHTCGSNTHGQLGHGDT-LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
G V T G GQLG G+ ++R P ++ E+V VQ AG + + ++ +G VYSF
Sbjct: 43 GLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDV---VQAEAGGMHTVCLSKSGQVYSF 99
Query: 294 GSGSNFCLGHGE--QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSL 346
G LG + E+ P ++ + K VV+VSAGD H AL G V L
Sbjct: 100 GCNDEGALGRDTSVEGSEMVPGKVE-LQEK---VVQVSAGDSHTAALTDDGRVFL 150
Score = 112 (44.5 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 48/168 (28%), Positives = 75/168 (44%)
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
+H + + G V T G G + +P LV + V Q AG T L+
Sbjct: 34 SHRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDVV--QAEAGGMHTVCLS 91
Query: 233 IRGHVHTCGSNTHGQLGHGDTLD--RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
G V++ G N G LG +++ P + L+E VVQ++AG S+ A+T +G V
Sbjct: 92 KSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVE-LQE--KVVQVSAGDSHTAALTDDGRV 148
Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
+ +GS + CL H Q R+G+ +RVS + V+ L
Sbjct: 149 FLWGSFRH-CLFHTSQRLGWGKEVW----RQGLSHLRVSKDNNGVIGL 191
Score = 48 (22.0 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 8/20 (40%), Positives = 16/20 (80%)
Query: 323 IHVVRVSAGDEHVVALDSSG 342
+ VV+V++G++H+V L + G
Sbjct: 208 VPVVKVASGNDHLVMLTADG 227
>WB|WBGene00017195 [details] [associations]
symbol:glo-4 species:6239 "Caenorhabditis elegans"
[GO:0019915 "lipid storage" evidence=IMP] [GO:0045202 "synapse"
evidence=IDA] [GO:0030424 "axon" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0030424 GO:GO:0045202 GO:GO:0019915
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GeneTree:ENSGT00700000104208 EMBL:FO081074
PIR:T28816 PIR:T28817 RefSeq:NP_505392.2 ProteinModelPortal:Q5DX34
SMR:Q5DX34 STRING:Q5DX34 PaxDb:Q5DX34 EnsemblMetazoa:F07C3.4
GeneID:179306 KEGG:cel:CELE_F07C3.4 UCSC:F07C3.4 CTD:179306
WormBase:F07C3.4 HOGENOM:HOG000021586 InParanoid:Q5DX34 OMA:MANHEDV
NextBio:904820 Uniprot:Q5DX34
Length = 1392
Score = 141 (54.7 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 53/202 (26%), Positives = 92/202 (45%)
Query: 101 EHSSDIVETSAGNMQ-ITTGRYHTLLISNSSVFSC-GSSLCGVLGHGPETTQCVSFTRIN 158
+H ++E G + I G H L++S+S S G + G G G + + + +++
Sbjct: 765 QHLPRVLEYPGGRPRAIACGAEHILVLSSSGQLSAWGGNRFGQCGVG-HSFRIANLHQVD 823
Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVP 217
A + +++ + H+AF+ G ++T G GH N +LV + G+
Sbjct: 824 GDWPA-IEKIACGQFHSAFICSDGSLWTFGWGVWGQLGHGGRNNS---NQLVPTRVNGLI 879
Query: 218 CK--QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP---TPKSIAPLEEVGSVV 272
CK Q+ G T LT G V CGS ++GQ+G D + + TP + PL V
Sbjct: 880 CKVTQIACGRAHTVVLTDTGRVLVCGSGSYGQMGVDDDIKKVFAFTPLPLGPLR----VR 935
Query: 273 QIAAGPSYMLAVTGNGVVYSFG 294
IA + + +T + V+ +G
Sbjct: 936 DIATHYYHSICITEDNRVFEWG 957
Score = 138 (53.6 bits), Expect = 9.2e-05, Sum P(2) = 9.2e-05
Identities = 26/76 (34%), Positives = 43/76 (56%)
Query: 269 GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 328
G++V +A G S+ +T G +Y++G G ++ LGHG +++ ++P Q F G V V
Sbjct: 1022 GNIVSVACGLSHSALITSEGTLYTWGKGLDYQLGHGNKNERMEPH--QVFEPNGAKWVNV 1079
Query: 329 SAGDEHVVALDSSGYV 344
S G+ H +A G V
Sbjct: 1080 SLGNNHTIASTDDGSV 1095
Score = 37 (18.1 bits), Expect = 9.2e-05, Sum P(2) = 9.2e-05
Identities = 8/34 (23%), Positives = 18/34 (52%)
Query: 73 GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDI 106
G+ + +I L++ +G+W + + HS+ I
Sbjct: 809 GVGHSFRIANLHQVDGDWPAIEKIACGQFHSAFI 842
>MGI|MGI:1921268 [details] [associations]
symbol:Als2 "amyotrophic lateral sclerosis 2 (juvenile)"
species:10090 "Mus musculus" [GO:0001662 "behavioral fear response"
evidence=IMP] [GO:0001726 "ruffle" evidence=IDA] [GO:0001881
"receptor recycling" evidence=IMP] [GO:0005085 "guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0005089 "Rho
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0005097 "Rab GTPase activator activity" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0005769 "early endosome"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO;IDA]
[GO:0005829 "cytosol" evidence=ISO] [GO:0006979 "response to
oxidative stress" evidence=IMP] [GO:0007032 "endosome organization"
evidence=ISO] [GO:0007041 "lysosomal transport" evidence=ISO]
[GO:0007409 "axonogenesis" evidence=ISO] [GO:0007528 "neuromuscular
junction development" evidence=IMP] [GO:0007626 "locomotory
behavior" evidence=IMP] [GO:0008104 "protein localization"
evidence=IMP] [GO:0008219 "cell death" evidence=ISO] [GO:0014069
"postsynaptic density" evidence=IDA] [GO:0016020 "membrane"
evidence=ISO] [GO:0016050 "vesicle organization" evidence=IDA]
[GO:0016197 "endosomal transport" evidence=IMP] [GO:0016601 "Rac
protein signal transduction" evidence=ISO] [GO:0017112 "Rab
guanyl-nucleotide exchange factor activity" evidence=ISO]
[GO:0017137 "Rab GTPase binding" evidence=ISO] [GO:0030027
"lamellipodium" evidence=IDA] [GO:0030424 "axon" evidence=ISO]
[GO:0030425 "dendrite" evidence=ISO] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030675 "Rac GTPase activator activity"
evidence=ISO] [GO:0030676 "Rac guanyl-nucleotide exchange factor
activity" evidence=ISO] [GO:0031982 "vesicle" evidence=ISO]
[GO:0032313 "regulation of Rab GTPase activity" evidence=IDA]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=ISO] [GO:0035023 "regulation of Rho protein signal
transduction" evidence=IEA] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IMP] [GO:0042802 "identical protein
binding" evidence=ISO] [GO:0042803 "protein homodimerization
activity" evidence=ISO] [GO:0043005 "neuron projection"
evidence=ISO] [GO:0043025 "neuronal cell body" evidence=ISO]
[GO:0043197 "dendritic spine" evidence=IDA] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0043539 "protein
serine/threonine kinase activator activity" evidence=ISO]
[GO:0045860 "positive regulation of protein kinase activity"
evidence=ISO] [GO:0048365 "Rac GTPase binding" evidence=ISO]
[GO:0048812 "neuron projection morphogenesis" evidence=ISO]
[GO:0051260 "protein homooligomerization" evidence=ISO] [GO:0071902
"positive regulation of protein serine/threonine kinase activity"
evidence=ISO] InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621
PROSITE:PS00741 PROSITE:PS50003 PROSITE:PS50010 SMART:SM00233
MGI:MGI:1921268 INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204
GO:GO:0005829 GO:GO:0043234 GO:GO:0042803 GO:GO:0014069
GO:GO:0008104 GO:GO:0006979 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0007528 GO:GO:0048812 GO:GO:0007626
GO:GO:0035249 GO:GO:0043539 GO:GO:0030027 GO:GO:0016197
GO:GO:0030426 Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 EMBL:CH466548 GO:GO:0001726
eggNOG:COG4642 InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493
SMART:SM00698 PROSITE:PS51205 GeneTree:ENSGT00600000084242
CTD:57679 HOVERGEN:HBG037320 KO:K04575 OMA:AKPAIDF
OrthoDB:EOG4FTVZP ChiTaRS:ALS2 GO:GO:0005769 GO:GO:0031982
GO:GO:0017137 GO:GO:0017112 GO:GO:0030676 GO:GO:0001662
GO:GO:0032855 GO:GO:0001881 GO:GO:0051036 GO:GO:0032313
GO:GO:0016050 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 EMBL:AB053307 EMBL:AC153652 EMBL:BC031479
EMBL:BC046828 EMBL:AK014320 IPI:IPI00170364 IPI:IPI00309844
RefSeq:NP_001153420.2 RefSeq:NP_082993.4 RefSeq:NP_666221.1
UniGene:Mm.272078 STRING:Q920R0 PhosphoSite:Q920R0 PaxDb:Q920R0
PRIDE:Q920R0 Ensembl:ENSMUST00000027178 Ensembl:ENSMUST00000163058
GeneID:74018 KEGG:mmu:74018 UCSC:uc007bdm.2 UCSC:uc007bdn.2
HOGENOM:HOG000033908 InParanoid:Q920R0 NextBio:339546
Genevestigator:Q920R0 GermOnline:ENSMUSG00000026024 Uniprot:Q920R0
Length = 1651
Score = 141 (54.7 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 45/137 (32%), Positives = 66/137 (48%)
Query: 207 PRLVEALKGVPCKQVTAGLNFTG----FL-TIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 261
PRL+ V + V ++G L ++R V T G GQLGHGD L R P
Sbjct: 487 PRLLRKAARVKTRTVVLTPTYSGEADALLPSLRTEVWTWGKGKEGQLGHGDVLPRLQPLC 546
Query: 262 IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 321
+ L+ V+ + AG S+ LA+T VYS+GS + LGH E + PR +
Sbjct: 547 VKCLDGK-EVIHLEAGGSHSLALTAKSQVYSWGSNTFGQLGHSEFPTTV-PRLSKVSSEN 604
Query: 322 GIHVVRVSAGDEHVVAL 338
G+ V+AG ++ + L
Sbjct: 605 GVW--SVAAGQDYSLFL 619
>DICTYBASE|DDB_G0276527 [details] [associations]
symbol:DDB_G0276527 "putative bifunctional
serine/threonine-protein kinase/ubiquitin-protein ligase
DDB_G0276527" species:44689 "Dictyostelium discoideum" [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0006468 "protein phosphorylation" evidence=IEA]
[GO:0006464 "cellular protein modification process" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] [GO:0004672 "protein kinase activity"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016310
"phosphorylation" evidence=IEA] [GO:0016301 "kinase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 InterPro:IPR000719 InterPro:IPR008271
InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 PROSITE:PS50237 SMART:SM00119 UniPathway:UPA00143
dictyBase:DDB_G0276527 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005524 eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674
GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 EMBL:AAFI02000015 SUPFAM:SSF56204 HSSP:Q9H0M0
RefSeq:XP_643080.1 ProteinModelPortal:Q8SSY6
EnsemblProtists:DDB0219986 GeneID:8620484 KEGG:ddi:DDB_G0276527
InParanoid:Q8SSY6 OMA:IITIIVE Uniprot:Q8SSY6
Length = 1887
Score = 132 (51.5 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 50/192 (26%), Positives = 90/192 (46%)
Query: 165 VVQVSASENHAAFVLQSGQVFTCG--DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
+V++S N +A + G +FT G D+ G + P+LV++L+G ++
Sbjct: 340 IVKLSCGTNRSAVITDKGLLFTFGRGDHGRLGLGEQSLLMQS-TPKLVQSLQGHFIIDMS 398
Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIA-------PLEEVGSVVQI 274
+G + LT +G V + G N GQLG G ++ T PK I ++ +++++
Sbjct: 399 SGGGHSLVLTNKGLVFSFGRNDQGQLGIGCFSNQQTIPKQIQWFQTSQQQQQQPINIIKV 458
Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHG--EQHDELQPRAIQTFRR--KGIHVVRVSA 330
+AG + +A++ N Y++G LG Q D P I + + + VS+
Sbjct: 459 SAGGYHSIAISDNNDTYAWGRSDYGVLGTSIDVQGDRNLPVLINSNSVVVDNVKFIDVSS 518
Query: 331 GDEHVVALDSSG 342
G +H VA+ G
Sbjct: 519 GFQHNVAMSIDG 530
Score = 97 (39.2 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
Identities = 22/76 (28%), Positives = 44/76 (57%)
Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ--PRAIQTFRRKGIHVVRV 328
+V+++ G + +T G++++FG G + LG GEQ +Q P+ +Q+ + G ++ +
Sbjct: 340 IVKLSCGTNRSAVITDKGLLFTFGRGDHGRLGLGEQSLLMQSTPKLVQSLQ--GHFIIDM 397
Query: 329 SAGDEHVVALDSSGYV 344
S+G H + L + G V
Sbjct: 398 SSGGGHSLVLTNKGLV 413
Score = 95 (38.5 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
Identities = 32/118 (27%), Positives = 54/118 (45%)
Query: 141 VLGHGPETTQCVSFTRINFPSAAH---VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH 197
+ G+G + + + I F + +V +S H++F+ G ++T GD GH
Sbjct: 163 IWGNGIRNYKNCNMSSIGFSEMYNQQKIVLISTGAIHSSFITDQGNLYTFGDGLLGKLGH 222
Query: 198 RDTNRPIFRPRLVEALKGVPCKQVTA---GLNFTGFLTIRGHVHTCGSNTHGQLGHGD 252
+ P+LVE + P +V + G + LTI G V++ G N QLG G+
Sbjct: 223 GNLES-YSSPKLVEFFQTKPSLRVVSIANGGKHSLALTICGKVYSWGGNDSCQLGLGN 279
Score = 80 (33.2 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 24/82 (29%), Positives = 42/82 (51%)
Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGP----ETTQCVSFTRINFPSAAHVVQVSA 170
I+TG H+ I++ ++++ G L G LGHG + + V F + PS VV ++
Sbjct: 193 ISTGAIHSSFITDQGNLYTFGDGLLGKLGHGNLESYSSPKLVEFFQTK-PSL-RVVSIAN 250
Query: 171 SENHAAFVLQSGQVFTCGDNSS 192
H+ + G+V++ G N S
Sbjct: 251 GGKHSLALTICGKVYSWGGNDS 272
>WB|WBGene00017190 [details] [associations]
symbol:F07B7.12 species:6239 "Caenorhabditis elegans"
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR027047
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR012983 Pfam:PF08005 EMBL:FO081059
GeneTree:ENSGT00390000011403 KO:K10693 PANTHER:PTHR12846
eggNOG:NOG240798 RefSeq:NP_505281.1 ProteinModelPortal:Q965Y9
SMR:Q965Y9 STRING:Q965Y9 PaxDb:Q965Y9 EnsemblMetazoa:F07B7.12
GeneID:184118 KEGG:cel:CELE_F07B7.12 UCSC:F07B7.12 CTD:184118
WormBase:F07B7.12 InParanoid:Q965Y9 OMA:KESRITH NextBio:923582
Uniprot:Q965Y9
Length = 1900
Score = 141 (54.7 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 42/107 (39%), Positives = 56/107 (52%)
Query: 191 SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF-TGFLTIRGHVHTCGSNTHGQLG 249
SS R T P R L + V V+ G NF T L V T GSN HGQLG
Sbjct: 743 SSTAAPQRSTLHPS-RVILSQGPHDVKVSSVSCG-NFHTVLLASDRRVFTFGSNCHGQLG 800
Query: 250 HGDTLDRPTPKS-IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
GDTL + TP+ I P + V +VQ+AAG ++ + +G V++FG+
Sbjct: 801 VGDTLSKNTPQQVILPSDTV--IVQVAAGSNHTILRANDGSVFTFGA 845
>DICTYBASE|DDB_G0282381 [details] [associations]
symbol:gefC "Ras nucleotide exchange factor"
species:44689 "Dictyostelium discoideum" [GO:0051056 "regulation of
small GTPase mediated signal transduction" evidence=IEA]
[GO:0035023 "regulation of Rho protein signal transduction"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005089 "Rho guanyl-nucleotide exchange factor
activity" evidence=IEA] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IEA] InterPro:IPR000219
InterPro:IPR000651 InterPro:IPR001895 InterPro:IPR008937
InterPro:IPR019804 Pfam:PF00617 Pfam:PF00618 Pfam:PF00621
PROSITE:PS00720 PROSITE:PS00741 PROSITE:PS50009 PROSITE:PS50010
PROSITE:PS50212 SMART:SM00147 SMART:SM00229 dictyBase:DDB_G0282381
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0007264 EMBL:AAFI02000047
GenomeReviews:CM000152_GR GO:GO:0005622 GO:GO:0005089
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
Gene3D:1.10.840.10 InterPro:IPR023578 SUPFAM:SSF48366
PANTHER:PTHR23113 HSSP:Q07889 EMBL:AY160092 RefSeq:XP_640241.1
ProteinModelPortal:Q8IS20 STRING:Q8IS20 EnsemblProtists:DDB0215004
GeneID:8623780 KEGG:ddi:DDB_G0282381 InParanoid:Q8IS20 OMA:SIATIRG
Uniprot:Q8IS20
Length = 1457
Score = 124 (48.7 bits), Expect = 7.7e-06, Sum P(2) = 7.7e-06
Identities = 34/89 (38%), Positives = 50/89 (56%)
Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
P++VE +K V K + G+ T LT G ++ G N HG+LG GDT+DR TP + L+
Sbjct: 408 PKMVE-IKCV--KYIATGVKNTAALTEWGELYMWGINEHGELGLGDTIDRRTPTRVIRLK 464
Query: 267 -EVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
EV S IA ++ T +G +Y +G
Sbjct: 465 NEVVST--IACSSTHSACYTESGKMYVWG 491
Score = 63 (27.2 bits), Expect = 7.7e-06, Sum P(2) = 7.7e-06
Identities = 18/62 (29%), Positives = 28/62 (45%)
Query: 130 SVFSCGSSLCGVLGHGPETTQ-CVSFTRINFPSAA--HVVQVSASENHAAFVLQSGQVFT 186
SVF+ G G LG G T C + ++N+ + V +V+ H FV ++
Sbjct: 2 SVFTFGHGSNGALGLGKITDDTCPTPQKVNYFTEIDKRVKKVACGSYHTVFVTDDEHLYI 61
Query: 187 CG 188
CG
Sbjct: 62 CG 63
Score = 61 (26.5 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 17/51 (33%), Positives = 29/51 (56%)
Query: 103 SSDIVETSAGNM--QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQ 150
S+ +E S N Q+ G YH +L++ +V++ GS+ G LG+ +T Q
Sbjct: 323 STHFLENSPLNTIKQVALGNYHIVLLTEGGNVWTWGSNSNGQLGYLVDTQQ 373
Score = 50 (22.7 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 12/39 (30%), Positives = 20/39 (51%)
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHR-DTNR 202
+ QV+ H + + G V+T G NS+ G+ DT +
Sbjct: 335 IKQVALGNYHIVLLTEGGNVWTWGSNSNGQLGYLVDTQQ 373
Score = 42 (19.8 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 6/22 (27%), Positives = 14/22 (63%)
Query: 115 QITTGRYHTLLISNSS-VFSCG 135
++ G YHT+ +++ ++ CG
Sbjct: 42 KVACGSYHTVFVTDDEHLYICG 63
>RGD|1309901 [details] [associations]
symbol:Rccd1 "RCC1 domain containing 1" species:10116 "Rattus
norvegicus" [GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0005886
"plasma membrane" evidence=IEA;ISO] RGD:1309901 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 CTD:91433
OrthoDB:EOG41NTMF GeneTree:ENSGT00700000104312 IPI:IPI00391295
RefSeq:XP_218819.5 UniGene:Rn.225183 Ensembl:ENSRNOT00000029471
GeneID:308760 KEGG:rno:308760 UCSC:RGD:1309901 NextBio:659480
Uniprot:D3ZG92
Length = 378
Score = 117 (46.2 bits), Expect = 9.6e-06, Sum P(2) = 9.6e-06
Identities = 28/86 (32%), Positives = 43/86 (50%)
Query: 257 PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
P P PL V Q+ G + L + G V+S+G G + LGHG EL+PR ++
Sbjct: 149 PQPPFCQPLAPELRVRQLQLGAEHALLLCEAGQVFSWGGGRHGQLGHGSLEAELEPRLLE 208
Query: 317 TFRRKGIHVVRVSAGDEHVVALDSSG 342
+ G+ + V+AG H V + +G
Sbjct: 209 ALQ--GLRMAEVAAGGWHSVCVSETG 232
Score = 101 (40.6 bits), Expect = 8.9e-06, Sum P(2) = 8.9e-06
Identities = 27/84 (32%), Positives = 42/84 (50%)
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
V Q+ HA + ++GQVF+ G GH + PRL+EAL+G+ +V AG
Sbjct: 163 VRQLQLGAEHALLLCEAGQVFSWGGGRHGQLGHGSLEAEL-EPRLLEALQGLRMAEVAAG 221
Query: 225 LNFTGFLTIRGHVHTCGSNTHGQL 248
+ ++ G ++ G N GQL
Sbjct: 222 GWHSVCVSETGDIYIWGWNESGQL 245
Score = 73 (30.8 bits), Expect = 8.9e-06, Sum P(2) = 8.9e-06
Identities = 21/75 (28%), Positives = 38/75 (50%)
Query: 268 VGS-VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
+GS V+ + G + VT G +Y++G G LGH + QP ++ F + + V
Sbjct: 300 LGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTSSDQPCRVEYFVERQLEVR 359
Query: 327 RVSAG--DEHVVALD 339
V+ G + +V A++
Sbjct: 360 AVTCGPWNTYVYAVE 374
Score = 55 (24.4 bits), Expect = 9.6e-06, Sum P(2) = 9.6e-06
Identities = 16/39 (41%), Positives = 21/39 (53%)
Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRD 199
+A V QVSAS ++ A V + G+V G S G RD
Sbjct: 38 AADDVCQVSASWSYTALVTRGGRVELSGSVSCAADGCRD 76
>RGD|1310372 [details] [associations]
symbol:Als2 "amyotrophic lateral sclerosis 2 (juvenile)"
species:10116 "Rattus norvegicus" [GO:0001662 "behavioral fear
response" evidence=IEA;ISO] [GO:0001701 "in utero embryonic
development" evidence=IEP] [GO:0001726 "ruffle" evidence=IEA;ISO]
[GO:0001881 "receptor recycling" evidence=IEA;ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0005085 "guanyl-nucleotide
exchange factor activity" evidence=ISO;ISS] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0005769 "early endosome" evidence=ISO;ISS]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=ISO;ISS] [GO:0006979 "response to oxidative stress"
evidence=IEA;ISO] [GO:0007032 "endosome organization" evidence=ISO]
[GO:0007409 "axonogenesis" evidence=IMP] [GO:0007528 "neuromuscular
junction development" evidence=IEA;ISO] [GO:0007626 "locomotory
behavior" evidence=IEA;ISO] [GO:0008104 "protein localization"
evidence=IEA;ISO] [GO:0008219 "cell death" evidence=IMP]
[GO:0014069 "postsynaptic density" evidence=IEA;ISO] [GO:0016020
"membrane" evidence=IDA] [GO:0016050 "vesicle organization"
evidence=IEA;ISO] [GO:0016197 "endosomal transport"
evidence=IEA;ISO] [GO:0016601 "Rac protein signal transduction"
evidence=IDA] [GO:0017112 "Rab guanyl-nucleotide exchange factor
activity" evidence=ISO;ISS] [GO:0017137 "Rab GTPase binding"
evidence=ISO;ISS] [GO:0030027 "lamellipodium" evidence=IEA;ISO]
[GO:0030424 "axon" evidence=IDA] [GO:0030425 "dendrite"
evidence=ISO;ISS;IDA] [GO:0030426 "growth cone" evidence=IDA]
[GO:0030676 "Rac guanyl-nucleotide exchange factor activity"
evidence=ISO;ISS] [GO:0031982 "vesicle" evidence=ISO;ISS]
[GO:0032313 "regulation of Rab GTPase activity" evidence=IEA;ISO]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=ISO;ISS] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IEA;ISO] [GO:0042803 "protein
homodimerization activity" evidence=ISO;ISS] [GO:0043005 "neuron
projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0043197 "dendritic spine" evidence=ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IDA] [GO:0043234 "protein complex" evidence=ISO;ISS]
[GO:0043539 "protein serine/threonine kinase activator activity"
evidence=ISO;ISS] [GO:0045860 "positive regulation of protein
kinase activity" evidence=ISO;ISS] [GO:0048812 "neuron projection
morphogenesis" evidence=ISO;ISS] [GO:0051036 "regulation of
endosome size" evidence=ISO;ISS] [GO:0071902 "positive regulation
of protein serine/threonine kinase activity" evidence=ISO]
InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621 PROSITE:PS00741
PROSITE:PS50003 PROSITE:PS50010 SMART:SM00233 RGD:1310372
INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204 GO:GO:0005829
GO:GO:0005813 GO:GO:0043234 GO:GO:0042803 GO:GO:0014069
GO:GO:0008104 GO:GO:0006979 GO:GO:0016020 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0008219 GO:GO:0030424
GO:GO:0043025 GO:GO:0030425 GO:GO:0007528 GO:GO:0001701
GO:GO:0007626 GO:GO:0035249 GO:GO:0043539 GO:GO:0016197
GO:GO:0030426 Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0007409 GO:GO:0016601
eggNOG:COG4642 InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493
SMART:SM00698 PROSITE:PS51205 GeneTree:ENSGT00600000084242
CTD:57679 HOVERGEN:HBG037320 KO:K04575 OrthoDB:EOG4FTVZP
GO:GO:0005769 GO:GO:0031982 GO:GO:0017137 GO:GO:0017112
GO:GO:0030676 GO:GO:0001662 GO:GO:0032855 GO:GO:0001881
GO:GO:0051036 GO:GO:0032313 GO:GO:0016050 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
HOGENOM:HOG000033908 EMBL:AABR03068212 EMBL:BK005190
IPI:IPI00366955 RefSeq:NP_001013431.1 UniGene:Rn.219733
ProteinModelPortal:P0C5Y8 STRING:P0C5Y8 PhosphoSite:P0C5Y8
Ensembl:ENSRNOT00000035209 GeneID:363235 KEGG:rno:363235
UCSC:RGD:1310372 InParanoid:P0C5Y8 NextBio:682932
Genevestigator:P0C5Y8 Uniprot:P0C5Y8
Length = 1651
Score = 138 (53.6 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 42/130 (32%), Positives = 59/130 (45%)
Query: 207 PRLVEALKGVPCKQVTAGLNFTG-----FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 261
PRL+ V + V ++G ++R V T G GQLGHGD L R P
Sbjct: 487 PRLLRKAARVKTRTVVLTPTYSGEADALLPSLRTEVWTWGKGKEGQLGHGDVLPRLQPLC 546
Query: 262 IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 321
+ L+ V+ + AG S+ LA+T VYS+GS + LGH E + PR +
Sbjct: 547 VKCLDGK-EVIHLEAGGSHSLALTAKSQVYSWGSNTFGQLGHSEFPTTV-PRLSKVSSES 604
Query: 322 GIHVVRVSAG 331
G+ V G
Sbjct: 605 GVWSVAAGHG 614
>WB|WBGene00004457 [details] [associations]
symbol:rpm-1 species:6239 "Caenorhabditis elegans"
[GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0050807 "regulation of synapse organization" evidence=IGI;IMP]
[GO:0040011 "locomotion" evidence=IGI] [GO:0043409 "negative
regulation of MAPK cascade" evidence=IGI] [GO:0031647 "regulation
of protein stability" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0018991 "oviposition"
evidence=IMP] [GO:0030424 "axon" evidence=IDA] [GO:0031594
"neuromuscular junction" evidence=IDA] [GO:0045202 "synapse"
evidence=IDA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0031435 "mitogen-activated protein kinase kinase
kinase binding" evidence=IPI] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR027047 Pfam:PF00643 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
INTERPRO:IPR000408 Pfam:PF00415 Prosite:PS00518 GO:GO:0005634
GO:GO:0018991 GO:GO:0006915 GO:GO:0006355 GO:GO:0046872
GO:GO:0030424 GO:GO:0008270 GO:GO:0031594 GO:GO:0010171
GO:GO:0040011 GO:GO:0006351 GO:GO:0031647 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939
PROSITE:PS51284 GO:GO:0043409 InterPro:IPR012983 Pfam:PF08005
GO:GO:0050807 GeneTree:ENSGT00390000011403 KO:K10693
PANTHER:PTHR12846 eggNOG:NOG240798 EMBL:FO080217 PIR:T29165
RefSeq:NP_505267.1 ProteinModelPortal:Q17551 SMR:Q17551
STRING:Q17551 PaxDb:Q17551 EnsemblMetazoa:C01B7.6 GeneID:179259
KEGG:cel:CELE_C01B7.6 UCSC:C01B7.6 CTD:179259 WormBase:C01B7.6
HOGENOM:HOG000016145 InParanoid:Q17551 OMA:LLSILHW NextBio:904596
Uniprot:Q17551
Length = 3766
Score = 141 (54.7 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 42/107 (39%), Positives = 56/107 (52%)
Query: 191 SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF-TGFLTIRGHVHTCGSNTHGQLG 249
SS R T P R L + V V+ G NF T L V T GSN HGQLG
Sbjct: 743 SSTAAPQRSTLHPS-RVILSQGPHDVKVSSVSCG-NFHTVLLASDRRVFTFGSNCHGQLG 800
Query: 250 HGDTLDRPTPKS-IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
GDTL + TP+ I P + V +VQ+AAG ++ + +G V++FG+
Sbjct: 801 VGDTLSKNTPQQVILPSDTV--IVQVAAGSNHTILRANDGSVFTFGA 845
>ASPGD|ASPL0000064315 [details] [associations]
symbol:rcc1 species:162425 "Emericella nidulans"
[GO:0000790 "nuclear chromatin" evidence=IDA] [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0006406
"mRNA export from nucleus" evidence=IEA] [GO:0006407 "rRNA export
from nucleus" evidence=IEA] [GO:0000054 "ribosomal subunit export
from nucleus" evidence=IEA] [GO:0031291 "Ran protein signal
transduction" evidence=IEA] [GO:0042992 "negative regulation of
transcription factor import into nucleus" evidence=IEA] [GO:1901673
"regulation of spindle assembly involved in mitosis" evidence=IEA]
[GO:0060623 "regulation of chromosome condensation" evidence=IEA]
[GO:0007093 "mitotic cell cycle checkpoint" evidence=IEA]
[GO:0030071 "regulation of mitotic metaphase/anaphase transition"
evidence=IEA] [GO:0032888 "regulation of mitotic spindle
elongation" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 EMBL:BN001304
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AACD01000117 eggNOG:COG5184 OMA:PFEAIWA HOGENOM:HOG000170207
OrthoDB:EOG466ZVF RefSeq:XP_664582.1 ProteinModelPortal:Q5AXK2
STRING:Q5AXK2 EnsemblFungi:CADANIAT00000503 GeneID:2870170
KEGG:ani:AN6978.2 Uniprot:Q5AXK2
Length = 533
Score = 117 (46.2 bits), Expect = 0.00063, P = 0.00062
Identities = 48/194 (24%), Positives = 83/194 (42%)
Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGV 216
FP +V+V+A ++ + + GQV+ G ++ G + P+L+ LK +
Sbjct: 227 FPHGTVIVEVAAGDSSSFALTDEGQVYGWGTFRSNDGILGFDAKTKVQTTPKLLPDLKKI 286
Query: 217 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG---SVVQ 273
K + G N L +G V + GS QLG ++R + P E G +V
Sbjct: 287 --KHLVCGDNHVLALNDKGAVLSWGSGQQNQLGRR-IIERNKLNGLQP-REFGLPKGIVH 342
Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE-----LQPRAIQTFRRKGIHVVRV 328
I AG + AV +G V+++G S G E + + P + + +K +V ++
Sbjct: 343 IGAGAFHSFAVHQSGKVFAWGLNSFGETGIRENAGDSEAAIVHPTVVDSLSKK--NVTQI 400
Query: 329 SAGDEHVVALDSSG 342
G H +A G
Sbjct: 401 CGGAHHSIAATQDG 414
Score = 107 (42.7 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 45/137 (32%), Positives = 67/137 (48%)
Query: 215 GVPCKQVTAGLNFTGFLTIRGHVHTCGS--NTHGQLGH-GDTLDRPTPKSIAPLEEVGSV 271
G +V AG + + LT G V+ G+ + G LG T + TPK + L+++ +
Sbjct: 230 GTVIVEVAAGDSSSFALTDEGQVYGWGTFRSNDGILGFDAKTKVQTTPKLLPDLKKIKHL 289
Query: 272 VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG--EQH--DELQPRAIQTFRRKGIHVVR 327
V G +++LA+ G V S+GSG LG E++ + LQPR KGI V
Sbjct: 290 V---CGDNHVLALNDKGAVLSWGSGQQNQLGRRIIERNKLNGLQPREFGL--PKGI--VH 342
Query: 328 VSAGDEHVVALDSSGYV 344
+ AG H A+ SG V
Sbjct: 343 IGAGAFHSFAVHQSGKV 359
Score = 68 (29.0 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 24/75 (32%), Positives = 31/75 (41%)
Query: 130 SVFSCGSSLCGVLGHGP-ETTQCVSFTRIN---FPSAAHVVQVSASENHAAFVLQSGQVF 185
+V+ CG G LG G + V R+N P VVQV+ H + +V
Sbjct: 111 NVYVCGEGSSGELGLGVGKNVIDVKRPRLNPHLLPDDVGVVQVAVGGMHCVALTHDNKVL 170
Query: 186 TCGDNSSFCCGHRDT 200
T G N G RDT
Sbjct: 171 TWGVNDQGALG-RDT 184
>UNIPROTKB|E2R5W9 [details] [associations]
symbol:RCCD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 OMA:ERPGAWF GeneTree:ENSGT00700000104312
EMBL:AAEX03002330 EMBL:AAEX03002329 Ensembl:ENSCAFT00000035362
Uniprot:E2R5W9
Length = 313
Score = 126 (49.4 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 55/208 (26%), Positives = 84/208 (40%)
Query: 135 GSSLCGVLGHGPET---TQCVSFTRINFP-SAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
G CG G P + Q +S + P S A V +VSAS ++ A V +
Sbjct: 11 GFGFCG-FGQAPGSGRGRQVLSPEPLQTPGSGADVRRVSASWSYTALVTRERPPPALLRP 69
Query: 191 SSFCCGHRDTNRPIFRPRLVEALKG-VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
G + +P RP AL + +++ G L G V + G HGQLG
Sbjct: 70 GPRVPGAK-APQPALRPPAPRALAPELRARRLELGAEHALLLDEAGQVFSWGQGRHGQLG 128
Query: 250 HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG---SGSNFCLGHGEQ 306
HG P P+ + L+ + V ++AAG + + V+ G +Y +G SG
Sbjct: 129 HGSLEAEPEPRLLEALQGL-PVAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPSRSLA 187
Query: 307 HD-ELQPRAIQTFRRKGIHVVRVSAGDE 333
D + PR G V R + G++
Sbjct: 188 EDTKTIPREASGLNEDGFEVRRTAKGED 215
Score = 114 (45.2 bits), Expect = 0.00056, P = 0.00056
Identities = 37/145 (25%), Positives = 66/145 (45%)
Query: 202 RPIFRPRLVEAL-KGVPCKQVTAGLNFTGFLTIRGHVHTC---GSNTHGQLGHGDTLDRP 257
R + P ++ G ++V+A ++T +T G G L P
Sbjct: 27 RQVLSPEPLQTPGSGADVRRVSASWSYTALVTRERPPPALLRPGPRVPGAKAPQPALRPP 86
Query: 258 TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQT 317
P+++AP E+ + ++ G + L + G V+S+G G + LGHG E +PR ++
Sbjct: 87 APRALAP--ELRAR-RLELGAEHALLLDEAGQVFSWGQGRHGQLGHGSLEAEPEPRLLEA 143
Query: 318 FRRKGIHVVRVSAGDEHVVALDSSG 342
+ G+ V V+AG H V + +G
Sbjct: 144 LQ--GLPVAEVAAGGWHSVCVSETG 166
>UNIPROTKB|G3V2I3 [details] [associations]
symbol:RCCD1 "RCC1 domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 EMBL:AC068831 HGNC:HGNC:30457
ProteinModelPortal:G3V2I3 SMR:G3V2I3 Ensembl:ENST00000555155
ArrayExpress:G3V2I3 Bgee:G3V2I3 Uniprot:G3V2I3
Length = 374
Score = 94 (38.1 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 27/82 (32%), Positives = 40/82 (48%)
Query: 167 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
Q+ HA + +GQVF+ G GH T PRL+EAL+G+ +V AG
Sbjct: 162 QLELGAEHALLLDAAGQVFSWGGGRHGQLGH-GTLEAELEPRLLEALQGLVMAEVAAGGW 220
Query: 227 FTGFLTIRGHVHTCGSNTHGQL 248
+ ++ G ++ G N GQL
Sbjct: 221 HSVCVSETGDIYIWGWNESGQL 242
Score = 88 (36.0 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 26/82 (31%), Positives = 40/82 (48%)
Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT--LDRPTPKSIAP 264
P L++ G + + G T +T G ++T G +GQLGH DT LDRP
Sbjct: 289 PALLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDRPRRVEYFV 348
Query: 265 LEEVGSVVQIAAGP--SYMLAV 284
+++ V + GP +Y+ AV
Sbjct: 349 DKQL-QVKAVTCGPWNTYVYAV 369
Score = 76 (31.8 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 23/86 (26%), Positives = 42/86 (48%)
Query: 256 RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAI 315
+P P ++ L V+ + G + VT G +Y++G G LGH + +PR +
Sbjct: 286 QPFP-ALLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDRPRRV 344
Query: 316 QTFRRKGIHVVRVSAG--DEHVVALD 339
+ F K + V V+ G + +V A++
Sbjct: 345 EYFVDKQLQVKAVTCGPWNTYVYAVE 370
Score = 72 (30.4 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 25/80 (31%), Positives = 38/80 (47%)
Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV-QVSASE 172
Q+ G H LL+ + VFS G G LGHG T + R+ V+ +V+A
Sbjct: 162 QLELGAEHALLLDAAGQVFSWGGGRHGQLGHG--TLEAELEPRLLEALQGLVMAEVAAGG 219
Query: 173 NHAAFVLQSGQVFTCGDNSS 192
H+ V ++G ++ G N S
Sbjct: 220 WHSVCVSETGDIYIWGWNES 239
>UNIPROTKB|A6NED2 [details] [associations]
symbol:RCCD1 "RCC1 domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 EMBL:CH471101 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 EMBL:AC068831
EMBL:BC113826 EMBL:BC140708 EMBL:BC140709 IPI:IPI00399158
RefSeq:NP_001017919.1 RefSeq:NP_291022.2 UniGene:Hs.655895
ProteinModelPortal:A6NED2 SMR:A6NED2 STRING:A6NED2
PhosphoSite:A6NED2 PaxDb:A6NED2 PRIDE:A6NED2
Ensembl:ENST00000394258 Ensembl:ENST00000556618 GeneID:91433
KEGG:hsa:91433 UCSC:uc002bqj.3 CTD:91433 GeneCards:GC15P091498
HGNC:HGNC:30457 HPA:HPA039683 HPA:HPA040776 neXtProt:NX_A6NED2
PharmGKB:PA142671092 eggNOG:NOG305770 HOGENOM:HOG000154085
HOVERGEN:HBG061852 InParanoid:A6NED2 OMA:ERPGAWF OrthoDB:EOG41NTMF
PhylomeDB:A6NED2 GenomeRNAi:91433 NextBio:77244 ArrayExpress:A6NED2
Bgee:A6NED2 CleanEx:HS_RCCD1 Genevestigator:A6NED2 Uniprot:A6NED2
Length = 376
Score = 94 (38.1 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 27/82 (32%), Positives = 40/82 (48%)
Query: 167 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
Q+ HA + +GQVF+ G GH T PRL+EAL+G+ +V AG
Sbjct: 162 QLELGAEHALLLDAAGQVFSWGGGRHGQLGH-GTLEAELEPRLLEALQGLVMAEVAAGGW 220
Query: 227 FTGFLTIRGHVHTCGSNTHGQL 248
+ ++ G ++ G N GQL
Sbjct: 221 HSVCVSETGDIYIWGWNESGQL 242
Score = 88 (36.0 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 26/82 (31%), Positives = 40/82 (48%)
Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT--LDRPTPKSIAP 264
P L++ G + + G T +T G ++T G +GQLGH DT LDRP
Sbjct: 291 PALLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDRPRRVEYFV 350
Query: 265 LEEVGSVVQIAAGP--SYMLAV 284
+++ V + GP +Y+ AV
Sbjct: 351 DKQL-QVKAVTCGPWNTYVYAV 371
Score = 76 (31.8 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 23/86 (26%), Positives = 42/86 (48%)
Query: 256 RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAI 315
+P P ++ L V+ + G + VT G +Y++G G LGH + +PR +
Sbjct: 288 QPFP-ALLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDRPRRV 346
Query: 316 QTFRRKGIHVVRVSAG--DEHVVALD 339
+ F K + V V+ G + +V A++
Sbjct: 347 EYFVDKQLQVKAVTCGPWNTYVYAVE 372
Score = 72 (30.4 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 25/80 (31%), Positives = 38/80 (47%)
Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV-QVSASE 172
Q+ G H LL+ + VFS G G LGHG T + R+ V+ +V+A
Sbjct: 162 QLELGAEHALLLDAAGQVFSWGGGRHGQLGHG--TLEAELEPRLLEALQGLVMAEVAAGG 219
Query: 173 NHAAFVLQSGQVFTCGDNSS 192
H+ V ++G ++ G N S
Sbjct: 220 WHSVCVSETGDIYIWGWNES 239
>UNIPROTKB|H0YEL8 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 PANTHER:PTHR22870:SF7 HGNC:HGNC:17499 EMBL:AC055860
EMBL:AC124058 EMBL:AC124078 Ensembl:ENST00000529151 Uniprot:H0YEL8
Length = 299
Score = 125 (49.1 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 45/146 (30%), Positives = 66/146 (45%)
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHR---DTNRPIF----RPRLVEALKGVP 217
VV ++A HA SG VF G + CG R P+F P V L+
Sbjct: 19 VVCIAAGLRHAVAATASGIVFQWGTGLA-SCGRRLCPGQTLPLFFTAKEPSRVTGLENSK 77
Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGSVVQIAA 276
V AG + + LT G V+ GSN HGQL + + P P+ I A + V I +
Sbjct: 78 AMCVLAGSDHSASLTDAGEVYVWGSNKHGQLAN-EAAFLPVPQKIEAHCFQNEKVTAIWS 136
Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLG 302
G ++++A T G ++++G LG
Sbjct: 137 GWTHLVAQTETGKMFTWGRADYGQLG 162
>UNIPROTKB|G4N5N9 [details] [associations]
symbol:MGG_05277 "Alpha-tubulin suppressor protein Aats1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] INTERPRO:IPR000408 Pfam:PF00415
EMBL:CM001233 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 KO:K15462
RefSeq:XP_003712836.1 EnsemblFungi:MGG_05277T0 GeneID:2675298
KEGG:mgr:MGG_05277 Uniprot:G4N5N9
Length = 382
Score = 88 (36.0 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 34/109 (31%), Positives = 52/109 (47%)
Query: 237 VHTCGSNTHGQLGHGDTLDR-PTPKSIA--PLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
V++ G + G+LG G + R P + IA P E VV ++A +++AV NG VY +
Sbjct: 136 VYSFGCGSKGELGQGPLIIRVPFAQPIANFPPPET-EVVGLSACMGHVVAVLSNGDVYGW 194
Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
G+G LG E +PR I+ K V + + G E + G
Sbjct: 195 GNGRKGQLGAPEGIIT-EPRKIEGVPFK---VAKAACGKEFTCLVGEPG 239
Score = 82 (33.9 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 26/74 (35%), Positives = 37/74 (50%)
Query: 132 FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH---------VVQVSASENHAAFVLQSG 182
F+ GS+ G LG G + V + F SAA VVQV+A NH + Q G
Sbjct: 5 FALGSNGSGQLGIGHKEDISVPKPAL-FSSAAGELSANPTSPVVQVAAGGNHTLLLTQDG 63
Query: 183 QVFTCGDNSSFCCG 196
++++ GD +S CG
Sbjct: 64 EIYSSGDPASGACG 77
>UNIPROTKB|F1SI31 [details] [associations]
symbol:ALS2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051036 "regulation of endosome size" evidence=IEA]
[GO:0048812 "neuron projection morphogenesis" evidence=IEA]
[GO:0043539 "protein serine/threonine kinase activator activity"
evidence=IEA] [GO:0043234 "protein complex" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=IEA] [GO:0032313 "regulation of Rab GTPase activity"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0030676 "Rac
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0030027 "lamellipodium" evidence=IEA] [GO:0017137 "Rab GTPase
binding" evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange
factor activity" evidence=IEA] [GO:0016197 "endosomal transport"
evidence=IEA] [GO:0016050 "vesicle organization" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0008104
"protein localization" evidence=IEA] [GO:0007626 "locomotory
behavior" evidence=IEA] [GO:0007528 "neuromuscular junction
development" evidence=IEA] [GO:0006979 "response to oxidative
stress" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005769 "early endosome"
evidence=IEA] [GO:0001881 "receptor recycling" evidence=IEA]
[GO:0001726 "ruffle" evidence=IEA] [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0005543 "phospholipid binding"
evidence=IEA] InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621
PROSITE:PS50003 PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408
Pfam:PF00415 Pfam:PF02204 GO:GO:0005829 GO:GO:0005813 GO:GO:0043234
GO:GO:0014069 GO:GO:0008104 GO:GO:0006979 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0007528 GO:GO:0048812
GO:GO:0007626 GO:GO:0035249 GO:GO:0043539 GO:GO:0016197
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 InterPro:IPR003409
InterPro:IPR003123 Pfam:PF02493 SMART:SM00698 PROSITE:PS51205
GeneTree:ENSGT00600000084242 OMA:AKPAIDF GO:GO:0005769
GO:GO:0017112 GO:GO:0030676 GO:GO:0001662 GO:GO:0032855
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
Ensembl:ENSSSCT00000017539 Uniprot:F1SI31
Length = 1644
Score = 133 (51.9 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 49/171 (28%), Positives = 76/171 (44%)
Query: 183 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
+V+T G GH D P +P V+ L G + AG + LT + V++ GS
Sbjct: 521 EVWTWGKGKDGQLGHGDV-LPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGS 579
Query: 243 NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN-----GVVYSFGSGS 297
NT GQLGH D P+ +A + V +AAG Y L + G+ YS
Sbjct: 580 NTFGQLGHSD-FPTTVPR-LAKMNSENGVWSVAAGQDYSLFLVDTEDFQPGLYYSGRQDP 637
Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSS--GYVS 345
E H + + + + G ++ RV+AG + +AL D + GY++
Sbjct: 638 TEGDNLPENHSGTKTPVLLSCSKLG-YISRVTAGKDSCLALVDKNIMGYIA 687
Score = 130 (50.8 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 43/137 (31%), Positives = 65/137 (47%)
Query: 207 PRLVEALKGVPCKQVTAGLNFTG----FL-TIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 261
PRL+ V + V ++G L ++R V T G GQLGHGD L R P
Sbjct: 487 PRLLRRAARVKTRTVVLTPTYSGEADALLPSLRTEVWTWGKGKDGQLGHGDVLPRLQPLC 546
Query: 262 IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 321
+ L+ V+ + AG + LA+T VYS+GS + LGH + + PR +
Sbjct: 547 VKCLDGK-EVIHLEAGGYHSLALTAKSQVYSWGSNTFGQLGHSDFPTTV-PRLAKMNSEN 604
Query: 322 GIHVVRVSAGDEHVVAL 338
G+ V+AG ++ + L
Sbjct: 605 GVW--SVAAGQDYSLFL 619
>UNIPROTKB|Q96Q42 [details] [associations]
symbol:ALS2 "Alsin" species:9606 "Homo sapiens" [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001881 "receptor recycling"
evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA] [GO:0007528
"neuromuscular junction development" evidence=IEA] [GO:0007626
"locomotory behavior" evidence=IEA] [GO:0008104 "protein
localization" evidence=IEA] [GO:0008219 "cell death" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016050 "vesicle organization"
evidence=IEA] [GO:0016197 "endosomal transport" evidence=IEA]
[GO:0016601 "Rac protein signal transduction" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0032313 "regulation of Rab
GTPase activity" evidence=IEA] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange factor
activity" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0005769 "early endosome"
evidence=IDA] [GO:0007032 "endosome organization" evidence=IGI;NAS]
[GO:0043234 "protein complex" evidence=IDA] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IDA]
[GO:0017137 "Rab GTPase binding" evidence=NAS;IDA] [GO:0051036
"regulation of endosome size" evidence=IEP] [GO:0032855 "positive
regulation of Rac GTPase activity" evidence=IDA] [GO:0035022
"positive regulation of Rac protein signal transduction"
evidence=IC] [GO:0030425 "dendrite" evidence=IDA] [GO:0048812
"neuron projection morphogenesis" evidence=IDA] [GO:0043539
"protein serine/threonine kinase activator activity" evidence=IDA]
[GO:0045860 "positive regulation of protein kinase activity"
evidence=IDA] [GO:0001726 "ruffle" evidence=ISS] [GO:0030027
"lamellipodium" evidence=ISS] [GO:0005087 "Ran guanyl-nucleotide
exchange factor activity" evidence=NAS] [GO:0030676 "Rac
guanyl-nucleotide exchange factor activity" evidence=IDA]
[GO:0042803 "protein homodimerization activity" evidence=IPI]
[GO:0030426 "growth cone" evidence=ISS] [GO:0005813 "centrosome"
evidence=IDA] [GO:0071902 "positive regulation of protein
serine/threonine kinase activity" evidence=IDA] InterPro:IPR000219
InterPro:IPR001849 Pfam:PF00621 PROSITE:PS00741 PROSITE:PS50003
PROSITE:PS50010 SMART:SM00233 EMBL:AB053305 EMBL:AB053306
INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204 GO:GO:0005829
GO:GO:0005813 GO:GO:0043234 GO:GO:0014069 GO:GO:0008104
GO:GO:0006979 GO:GO:0016020 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0008219 EMBL:CH471063 GO:GO:0030424
GO:GO:0043025 GO:GO:0030425 GO:GO:0007528 GO:GO:0001701
GO:GO:0048812 GO:GO:0007626 GO:GO:0035249 GO:GO:0043539
GO:GO:0030027 GO:GO:0016197 GO:GO:0030426 Gene3D:1.20.900.10
SUPFAM:SSF48065 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0007409 GO:GO:0001726 GO:GO:0016601
GO:GO:0007032 eggNOG:COG4642 InterPro:IPR003409 InterPro:IPR003123
Pfam:PF02493 SMART:SM00698 PROSITE:PS51205 EMBL:AF391100
EMBL:AB046783 EMBL:AK023024 EMBL:AC007242 EMBL:AC007279
EMBL:BC029174 IPI:IPI00242146 IPI:IPI00295004 IPI:IPI00295005
RefSeq:NP_001129217.1 RefSeq:NP_065970.2 UniGene:Hs.471096
UniGene:Hs.621812 ProteinModelPortal:Q96Q42 SMR:Q96Q42
MINT:MINT-1632128 STRING:Q96Q42 PhosphoSite:Q96Q42 DMDM:296434394
PaxDb:Q96Q42 PRIDE:Q96Q42 Ensembl:ENST00000264276
Ensembl:ENST00000467448 GeneID:57679 KEGG:hsa:57679 UCSC:uc002uyo.3
UCSC:uc002uyq.3 UCSC:uc002uyr.3 CTD:57679 GeneCards:GC02M202564
H-InvDB:HIX0200249 HGNC:HGNC:443 HPA:HPA046588 MIM:205100
MIM:606352 MIM:606353 MIM:607225 neXtProt:NX_Q96Q42 Orphanet:803
Orphanet:293168 Orphanet:300605 Orphanet:247604 PharmGKB:PA24732
HOVERGEN:HBG037320 InParanoid:Q96Q42 KO:K04575 OMA:AKPAIDF
OrthoDB:EOG4FTVZP ChiTaRS:ALS2 GenomeRNAi:57679 NextBio:64490
ArrayExpress:Q96Q42 Bgee:Q96Q42 CleanEx:HS_ALS2
Genevestigator:Q96Q42 GermOnline:ENSG00000003393 GO:GO:0005769
GO:GO:0031982 GO:GO:0017137 GO:GO:0017112 GO:GO:0030676
GO:GO:0005087 GO:GO:0001662 GO:GO:0032855 GO:GO:0035022
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
Uniprot:Q96Q42
Length = 1657
Score = 133 (51.9 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 49/171 (28%), Positives = 76/171 (44%)
Query: 183 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
+V+T G GH D P +P V+ L G + AG + LT + V++ GS
Sbjct: 527 EVWTWGKGKEGQLGHGDV-LPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGS 585
Query: 243 NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN-----GVVYSFGSGS 297
NT GQLGH D P+ +A + V IAAG Y L + G+ YS
Sbjct: 586 NTFGQLGHSD-FPTTVPR-LAKISSENGVWSIAAGRDYSLFLVDTEDFQPGLYYSGRQDP 643
Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSS--GYVS 345
E H + + + + G ++ RV+AG D ++ +D + GY++
Sbjct: 644 TEGDNLPENHSGSKTPVLLSCSKLG-YISRVTAGKDSYLALVDKNIMGYIA 693
Score = 129 (50.5 bits), Expect = 0.00012, P = 0.00012
Identities = 42/137 (30%), Positives = 65/137 (47%)
Query: 207 PRLVEALKGVPCKQVTAGLNFTG----FL-TIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 261
PRL+ V + V ++G L ++R V T G GQLGHGD L R P
Sbjct: 493 PRLLRKAARVKTRTVVLTPTYSGEADALLPSLRTEVWTWGKGKEGQLGHGDVLPRLQPLC 552
Query: 262 IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 321
+ L+ V+ + AG + LA+T VYS+GS + LGH + + PR +
Sbjct: 553 VKCLDGK-EVIHLEAGGYHSLALTAKSQVYSWGSNTFGQLGHSDFPTTV-PRLAKISSEN 610
Query: 322 GIHVVRVSAGDEHVVAL 338
G+ ++AG ++ + L
Sbjct: 611 GVW--SIAAGRDYSLFL 625
>MGI|MGI:2179432 [details] [associations]
symbol:Mycbp2 "MYC binding protein 2" species:10090 "Mus
musculus" [GO:0005515 "protein binding" evidence=IPI] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008045 "motor neuron axon
guidance" evidence=IMP] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0015630 "microtubule cytoskeleton" evidence=IDA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0021785
"branchiomotor neuron axon guidance" evidence=IMP] [GO:0021952
"central nervous system projection neuron axonogenesis"
evidence=IMP] [GO:0030424 "axon" evidence=IDA] [GO:0032880
"regulation of protein localization" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0048667 "cell morphogenesis
involved in neuron differentiation" evidence=IMP] [GO:0051493
"regulation of cytoskeleton organization" evidence=IMP]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 UniPathway:UPA00143 MGI:MGI:2179432
INTERPRO:IPR000408 Pfam:PF00415 Prosite:PS00518 GO:GO:0005634
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0015630 GO:GO:0006355
GO:GO:0046872 GO:GO:0016874 GO:GO:0030424 GO:GO:0008270
GO:GO:0032880 GO:GO:0006351 GO:GO:0016567 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0021952 Gene3D:3.30.40.10
InterPro:IPR014756 InterPro:IPR013083 SUPFAM:SSF81296
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 CleanEx:MM_PAM
InterPro:IPR004939 PROSITE:PS51284 InterPro:IPR012983 Pfam:PF08005
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194 KO:K10693
PANTHER:PTHR12846 CTD:23077 eggNOG:NOG240798 HOVERGEN:HBG053153
OrthoDB:EOG4VQ9NB ChiTaRS:MYCBP2 GO:GO:0021785 EMBL:AY325887
EMBL:BC059257 IPI:IPI00380409 IPI:IPI00608114 RefSeq:NP_997098.2
UniGene:Mm.6478 PDB:3GBW PDB:3HWJ PDBsum:3GBW PDBsum:3HWJ
ProteinModelPortal:Q7TPH6 SMR:Q7TPH6 IntAct:Q7TPH6 STRING:Q7TPH6
PhosphoSite:Q7TPH6 PaxDb:Q7TPH6 PRIDE:Q7TPH6 DNASU:105689
GeneID:105689 KEGG:mmu:105689 UCSC:uc007uwl.1 HOGENOM:HOG000112908
InParanoid:Q7TPH6 EvolutionaryTrace:Q7TPH6 NextBio:357830
CleanEx:MM_MYCBP2 Genevestigator:Q7TPH6
GermOnline:ENSMUSG00000033004 Uniprot:Q7TPH6
Length = 4711
Score = 151 (58.2 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 44/115 (38%), Positives = 58/115 (50%)
Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
+ F VQVS +H+ ++++G V+T G GH D N P LV+AL G
Sbjct: 896 VRFDCELRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGC-PTLVQALPG- 953
Query: 217 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGS 270
P QVTA N T L + G V T GS + GQLG LD P + AP+ +GS
Sbjct: 954 PSTQVTACSNHTAVLLMDGQVFTFGSFSKGQLGR-PILDIPYWNAKPAPMPNIGS 1007
Score = 37 (18.1 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 6/22 (27%), Positives = 14/22 (63%)
Query: 278 PSYMLAVTGNGVVYSFGSGSNF 299
P+ +L + GN ++S + S++
Sbjct: 2065 PTMVLVLPGNEALFSLETASDY 2086
>UNIPROTKB|Q5BIW4 [details] [associations]
symbol:ALS2 "Alsin" species:9598 "Pan troglodytes"
[GO:0001662 "behavioral fear response" evidence=ISS] [GO:0001726
"ruffle" evidence=ISS] [GO:0001881 "receptor recycling"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0005769
"early endosome" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0006979 "response to oxidative stress" evidence=ISS]
[GO:0007528 "neuromuscular junction development" evidence=ISS]
[GO:0007626 "locomotory behavior" evidence=ISS] [GO:0008104
"protein localization" evidence=ISS] [GO:0014069 "postsynaptic
density" evidence=ISS] [GO:0016050 "vesicle organization"
evidence=ISS] [GO:0016197 "endosomal transport" evidence=ISS]
[GO:0017112 "Rab guanyl-nucleotide exchange factor activity"
evidence=ISS] [GO:0017137 "Rab GTPase binding" evidence=ISS]
[GO:0030027 "lamellipodium" evidence=ISS] [GO:0030425 "dendrite"
evidence=ISS] [GO:0030676 "Rac guanyl-nucleotide exchange factor
activity" evidence=ISS] [GO:0031982 "vesicle" evidence=ISS]
[GO:0032313 "regulation of Rab GTPase activity" evidence=ISS]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=ISS] [GO:0035249 "synaptic transmission, glutamatergic"
evidence=ISS] [GO:0042803 "protein homodimerization activity"
evidence=ISS] [GO:0043197 "dendritic spine" evidence=ISS]
[GO:0043234 "protein complex" evidence=ISS] [GO:0043539 "protein
serine/threonine kinase activator activity" evidence=ISS]
[GO:0045860 "positive regulation of protein kinase activity"
evidence=ISS] [GO:0048812 "neuron projection morphogenesis"
evidence=ISS] [GO:0051036 "regulation of endosome size"
evidence=ISS] [GO:0071902 "positive regulation of protein
serine/threonine kinase activity" evidence=ISS] [GO:0005813
"centrosome" evidence=ISS] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=ISS] InterPro:IPR000219
InterPro:IPR001849 Pfam:PF00621 PROSITE:PS00741 PROSITE:PS50003
PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415
Pfam:PF02204 GO:GO:0005829 GO:GO:0043234 GO:GO:0042803
GO:GO:0014069 GO:GO:0008104 GO:GO:0006979 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0007528 GO:GO:0048812
GO:GO:0007626 GO:GO:0035249 GO:GO:0043539 GO:GO:0030027
GO:GO:0016197 Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0001726 eggNOG:COG4642
InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493 SMART:SM00698
PROSITE:PS51205 CTD:57679 HOVERGEN:HBG037320 KO:K04575
OrthoDB:EOG4FTVZP GO:GO:0005769 GO:GO:0031982 GO:GO:0017137
GO:GO:0017112 GO:GO:0030676 GO:GO:0001662 GO:GO:0032855
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
HOGENOM:HOG000033908 EMBL:BK005194 RefSeq:NP_001073389.1
UniGene:Ptr.813 ProteinModelPortal:Q5BIW4 STRING:Q5BIW4
PRIDE:Q5BIW4 GeneID:470613 KEGG:ptr:470613 InParanoid:Q5BIW4
NextBio:20847741 Uniprot:Q5BIW4
Length = 1657
Score = 132 (51.5 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 48/171 (28%), Positives = 76/171 (44%)
Query: 183 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
+V+T G GH D P +P V+ L G + AG + LT + V++ GS
Sbjct: 527 EVWTWGKGKEGQLGHGDV-LPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGS 585
Query: 243 NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN-----GVVYSFGSGS 297
NT GQLGH D P+ +A + V +AAG Y L + G+ YS
Sbjct: 586 NTFGQLGHSD-FPTTVPR-LAKISSENGVWSVAAGRDYSLFLVDTEDFQPGLYYSGRQDP 643
Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSS--GYVS 345
E H + + + + G ++ RV+AG D ++ +D + GY++
Sbjct: 644 TEGDNLPENHSGSKTPVLLSCSKLG-YISRVTAGKDSYLALVDKNIMGYIA 693
Score = 130 (50.8 bits), Expect = 9.4e-05, P = 9.4e-05
Identities = 43/137 (31%), Positives = 65/137 (47%)
Query: 207 PRLVEALKGVPCKQVTAGLNFTG----FL-TIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 261
PRL+ V + V ++G L ++R V T G GQLGHGD L R P
Sbjct: 493 PRLLRKAARVKTRTVVLTPTYSGEADALLPSLRTEVWTWGKGKEGQLGHGDVLPRLQPLC 552
Query: 262 IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 321
+ L+ V+ + AG + LA+T VYS+GS + LGH + + PR +
Sbjct: 553 VKCLDGK-EVIHLEAGGYHSLALTAKSQVYSWGSNTFGQLGHSDFPTTV-PRLAKISSEN 610
Query: 322 GIHVVRVSAGDEHVVAL 338
G+ V+AG ++ + L
Sbjct: 611 GVW--SVAAGRDYSLFL 625
>UNIPROTKB|E1B8U7 [details] [associations]
symbol:RCCD1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
OMA:ERPGAWF GeneTree:ENSGT00700000104312 EMBL:DAAA02052163
IPI:IPI00710464 UniGene:Bt.111664 Ensembl:ENSBTAT00000024803
NextBio:20875558 Uniprot:E1B8U7
Length = 377
Score = 109 (43.4 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 26/86 (30%), Positives = 42/86 (48%)
Query: 257 PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
P P PL ++ G + L + G V+S+G+G + LGHG E +PR ++
Sbjct: 147 PRPPFYRPLAPTLRARRLELGAEHALLLDAAGQVFSWGAGRHGQLGHGTLEAEPEPRLLE 206
Query: 317 TFRRKGIHVVRVSAGDEHVVALDSSG 342
+ G+ + V+AG H V L +G
Sbjct: 207 ALQ--GLRMAEVAAGGWHSVCLSETG 230
Score = 96 (38.9 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 28/82 (34%), Positives = 42/82 (51%)
Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT--LDRPTPKSIAP 264
P L++ G +V+ G T LT G ++T G +GQLGH DT LDRP
Sbjct: 292 PALLDLSPGSEAVKVSCGSRHTAVLTRTGELYTWGWGKYGQLGHKDTTTLDRPCRVEYFV 351
Query: 265 LEEVGSVVQIAAGP--SYMLAV 284
+++ V ++ GP +Y+ AV
Sbjct: 352 DKQL-QVRTVSCGPWNTYVYAV 372
Score = 70 (29.7 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 22/80 (27%), Positives = 38/80 (47%)
Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASE 172
++ G H LL+ + VFS G+ G LGHG T + R+ + +V+A
Sbjct: 163 RLELGAEHALLLDAAGQVFSWGAGRHGQLGHG--TLEAEPEPRLLEALQGLRMAEVAAGG 220
Query: 173 NHAAFVLQSGQVFTCGDNSS 192
H+ + ++G ++ G N S
Sbjct: 221 WHSVCLSETGDIYIWGWNES 240
Score = 47 (21.6 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 20/58 (34%), Positives = 27/58 (46%)
Query: 135 GSSLCG---VLGHGPETTQCVSFTRINFPSAA-HVVQVSASENHAAFVLQSGQVFTCG 188
G CG LG G Q S + P + V +VSAS ++ AFV + G+V G
Sbjct: 11 GFGFCGFGQALGSGLGR-QVHSPEPLRTPGGSLGVCRVSASWSYTAFVTRGGRVQLSG 67
>UNIPROTKB|F1RMH6 [details] [associations]
symbol:RCCD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
OMA:ERPGAWF GeneTree:ENSGT00700000104312 EMBL:CT868688
Ensembl:ENSSSCT00000002041 Uniprot:F1RMH6
Length = 382
Score = 105 (42.0 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 25/86 (29%), Positives = 41/86 (47%)
Query: 257 PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
P P PL ++ G + L + G V+S+G G + LGHG E +PR ++
Sbjct: 152 PQPPFYRPLAPTLRARRLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAEREPRVLE 211
Query: 317 TFRRKGIHVVRVSAGDEHVVALDSSG 342
+ G+ + V+AG H V + +G
Sbjct: 212 ALQ--GLPMAEVAAGGWHSVCVSETG 235
Score = 98 (39.6 bits), Expect = 0.00085, Sum P(2) = 0.00085
Identities = 26/92 (28%), Positives = 44/92 (47%)
Query: 203 PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
P +RP L L+ +++ G L G V + G HGQLGHG P+ +
Sbjct: 155 PFYRP-LAPTLRA---RRLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAEREPRVL 210
Query: 263 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
L+ + + ++AAG + + V+ G +Y +G
Sbjct: 211 EALQGL-PMAEVAAGGWHSVCVSETGDIYIWG 241
Score = 97 (39.2 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 40/120 (33%), Positives = 57/120 (47%)
Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
HA + +GQVF+ G GH T PR++EAL+G+P +V AG + ++
Sbjct: 175 HALLLDAAGQVFSWGGGRHGQLGH-GTLEAEREPRVLEALQGLPMAEVAAGGWHSVCVSE 233
Query: 234 RGHVHTCGSNTHGQLG-HGDTL--DRPTPKSIAP-LEEVGSVVQIAA-----GPSYMLAV 284
G ++ G N GQL +L D T AP L E GS + A GP+ +AV
Sbjct: 234 TGDIYIWGWNESGQLALPARSLAEDGKTITGDAPGLNEDGSEAKRATEGEDGGPTPFIAV 293
Score = 88 (36.0 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 26/82 (31%), Positives = 41/82 (50%)
Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT--LDRPTPKSIAP 264
P L++ G + + G T +T G ++T G +GQLGH DT LDRP
Sbjct: 297 PALLDLPLGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHKDTTSLDRPCRVEYFV 356
Query: 265 LEEVGSVVQIAAGP--SYMLAV 284
+++ V ++ GP +Y+ AV
Sbjct: 357 DKQL-QVRTVSCGPWNTYVFAV 377
Score = 71 (30.1 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 23/80 (28%), Positives = 37/80 (46%)
Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASE 172
++ G H LL+ + VFS G G LGHG T + R+ + +V+A
Sbjct: 168 RLELGAEHALLLDAAGQVFSWGGGRHGQLGHG--TLEAEREPRVLEALQGLPMAEVAAGG 225
Query: 173 NHAAFVLQSGQVFTCGDNSS 192
H+ V ++G ++ G N S
Sbjct: 226 WHSVCVSETGDIYIWGWNES 245
Score = 69 (29.3 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 22/75 (29%), Positives = 38/75 (50%)
Query: 268 VGS-VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
+GS V+ + G + VT G +Y++G G LGH + +P ++ F K + V
Sbjct: 304 LGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHKDTTSLDRPCRVEYFVDKQLQVR 363
Query: 327 RVSAG--DEHVVALD 339
VS G + +V A++
Sbjct: 364 TVSCGPWNTYVFAVE 378
Score = 57 (25.1 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 23/69 (33%), Positives = 31/69 (44%)
Query: 135 GSSLCG---VLGHGPETTQCVSFTRINFPSAA-HVVQVSASENHAAFVLQSGQVFTCGDN 190
G CG LG G Q S + P A+ V +VSAS ++ A V + G++ G
Sbjct: 11 GFGFCGFGQALGSG-RGRQVYSPEPLEVPGASLDVCRVSASWSYTATVTRGGRLELSGSV 69
Query: 191 SSFCCGHRD 199
S G RD
Sbjct: 70 SGSAGGCRD 78
>GENEDB_PFALCIPARUM|PFE0420c [details] [associations]
symbol:PFE0420c "guanidine nucleotide exchange
factor, putative" species:5833 "Plasmodium falciparum" [GO:0006323
"DNA packaging" evidence=ISS] [GO:0020011 "apicoplast"
evidence=RCA] INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0006323 EMBL:AL844504
GenomeReviews:AL844504_GR RefSeq:XP_001351643.1
ProteinModelPortal:Q8I418 EnsemblProtists:PFE0420c:mRNA
GeneID:812857 KEGG:pfa:PFE0420c EuPathDB:PlasmoDB:PF3D7_0508500
HOGENOM:HOG000284105 ProtClustDB:CLSZ2446497 Uniprot:Q8I418
Length = 2606
Score = 124 (48.7 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 34/110 (30%), Positives = 57/110 (51%)
Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGD-TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
+F+ FL G V+T G N +G+LG+G+ L + I V +++IA G +Y+L V
Sbjct: 762 HFSVFLLESGKVYTAGYNKNGELGNGEFNLKKKFGVPILLNICVNKIIKIACGYNYVLCV 821
Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 334
+ G+VY +G LG G D +P ++ +V+ + AG +H
Sbjct: 822 SDVGLVYGWGKNDKSQLGIGVIKDFYEPVHVKNLT----NVINIFAGYDH 867
Score = 57 (25.1 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 13/53 (24%), Positives = 27/53 (50%)
Query: 156 RINFPSAAHVVQ-VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRP 207
+I FP ++ +S + H + G +++ G N+ C G+ TN+ ++ P
Sbjct: 341 KIVFPKKNTKIKFISCGDMHTLAICTGGVLYSWGYNNFGCIGN-GTNQNVYEP 392
Score = 52 (23.4 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 22/78 (28%), Positives = 35/78 (44%)
Query: 115 QITTGRYHTLLIS---NS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
+I+TG H ++ N S+F+ G + C LG G + T + F + V +
Sbjct: 21 KISTGLDHYACVAYYKNKPSIFTWGGNSCNQLGLGINNRFVNNPTVVCFFDSFIVASICC 80
Query: 171 SENHAAFVLQSGQVFTCG 188
+ N+A FVL V G
Sbjct: 81 T-NYATFVLVKKNVNDIG 97
>UNIPROTKB|Q8I418 [details] [associations]
symbol:RCC1 "Guanidine nucleotide exchange factor"
species:36329 "Plasmodium falciparum 3D7" [GO:0006323 "DNA
packaging" evidence=ISS] [GO:0020011 "apicoplast" evidence=RCA]
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0006323 EMBL:AL844504
GenomeReviews:AL844504_GR RefSeq:XP_001351643.1
ProteinModelPortal:Q8I418 EnsemblProtists:PFE0420c:mRNA
GeneID:812857 KEGG:pfa:PFE0420c EuPathDB:PlasmoDB:PF3D7_0508500
HOGENOM:HOG000284105 ProtClustDB:CLSZ2446497 Uniprot:Q8I418
Length = 2606
Score = 124 (48.7 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 34/110 (30%), Positives = 57/110 (51%)
Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGD-TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
+F+ FL G V+T G N +G+LG+G+ L + I V +++IA G +Y+L V
Sbjct: 762 HFSVFLLESGKVYTAGYNKNGELGNGEFNLKKKFGVPILLNICVNKIIKIACGYNYVLCV 821
Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 334
+ G+VY +G LG G D +P ++ +V+ + AG +H
Sbjct: 822 SDVGLVYGWGKNDKSQLGIGVIKDFYEPVHVKNLT----NVINIFAGYDH 867
Score = 57 (25.1 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 13/53 (24%), Positives = 27/53 (50%)
Query: 156 RINFPSAAHVVQ-VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRP 207
+I FP ++ +S + H + G +++ G N+ C G+ TN+ ++ P
Sbjct: 341 KIVFPKKNTKIKFISCGDMHTLAICTGGVLYSWGYNNFGCIGN-GTNQNVYEP 392
Score = 52 (23.4 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 22/78 (28%), Positives = 35/78 (44%)
Query: 115 QITTGRYHTLLIS---NS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
+I+TG H ++ N S+F+ G + C LG G + T + F + V +
Sbjct: 21 KISTGLDHYACVAYYKNKPSIFTWGGNSCNQLGLGINNRFVNNPTVVCFFDSFIVASICC 80
Query: 171 SENHAAFVLQSGQVFTCG 188
+ N+A FVL V G
Sbjct: 81 T-NYATFVLVKKNVNDIG 97
>UNIPROTKB|E2RSG1 [details] [associations]
symbol:ALS2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0035023 "regulation of Rho protein signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005543 "phospholipid binding" evidence=IEA]
[GO:0005089 "Rho guanyl-nucleotide exchange factor activity"
evidence=IEA] InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621
PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415
Pfam:PF02204 GO:GO:0005543 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0005622 GO:GO:0005089 Gene3D:1.20.900.10 SUPFAM:SSF48065
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023
InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493 SMART:SM00698
PROSITE:PS51205 GeneTree:ENSGT00600000084242 KO:K04575 OMA:AKPAIDF
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:AAEX03018021
RefSeq:XP_003640234.1 Ensembl:ENSCAFT00000019642 GeneID:100856109
KEGG:cfa:100856109 Uniprot:E2RSG1
Length = 1656
Score = 129 (50.5 bits), Expect = 0.00012, P = 0.00012
Identities = 43/137 (31%), Positives = 65/137 (47%)
Query: 207 PRLVEALKGVPCKQVTAGLNFTG----FL-TIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 261
PRL+ V + V ++G L ++R V T G GQLGHGD L R P
Sbjct: 492 PRLLRKAARVKTRTVVLTPTYSGEADALLPSLRTEVWTWGKGKEGQLGHGDVLPRLQPLC 551
Query: 262 IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 321
+ L+ V+ + AG + LA+T VYS+GS + LGH + + PR +
Sbjct: 552 VKCLDGK-EVIYLEAGGYHSLALTAKSQVYSWGSNTFGQLGHYDFPTTV-PRLAKVSSEN 609
Query: 322 GIHVVRVSAGDEHVVAL 338
G+ V+AG ++ + L
Sbjct: 610 GVW--SVAAGQDYSLFL 624
Score = 128 (50.1 bits), Expect = 0.00016, P = 0.00016
Identities = 50/175 (28%), Positives = 78/175 (44%)
Query: 183 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
+V+T G GH D P +P V+ L G + AG + LT + V++ GS
Sbjct: 526 EVWTWGKGKEGQLGHGDV-LPRLQPLCVKCLDGKEVIYLEAGGYHSLALTAKSQVYSWGS 584
Query: 243 NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN-----GVVYSF---- 293
NT GQLGH D P+ +A + V +AAG Y L + G+ YS
Sbjct: 585 NTFGQLGHYD-FPTTVPR-LAKVSSENGVWSVAAGQDYSLFLVDTEDFQPGLYYSGRQDP 642
Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSS--GYVS 345
G N E H + + + + G ++ RV+AG D ++ +D + GY++
Sbjct: 643 AEGDNL----PENHSGTKTPVLLSCSKLG-YISRVTAGKDSYLALVDKNVMGYIA 692
>UNIPROTKB|F1NDJ4 [details] [associations]
symbol:RCCD1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104312 EMBL:AADN02038799 IPI:IPI00812606
Ensembl:ENSGALT00000038135 OMA:GHKDTSS Uniprot:F1NDJ4
Length = 221
Score = 84 (34.6 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 20/44 (45%), Positives = 27/44 (61%)
Query: 206 RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
+PRLVEAL GVP + V AG + ++ G ++ G N GQLG
Sbjct: 23 QPRLVEALGGVPMRAVAAGGWHSACVSDGGDLYVWGWNESGQLG 66
Score = 73 (30.8 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 19/68 (27%), Positives = 33/68 (48%)
Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 323
PLE +V ++ G + A+T G + ++G G LGHG++ PR ++ +G+
Sbjct: 113 PLEP--AVAAVSCGSRHTAALTRGGELNTWGWGKYGQLGHGDRASCDHPRRVEQLWAEGL 170
Query: 324 HVVRVSAG 331
V G
Sbjct: 171 RAQEVVCG 178
>TAIR|locus:2156233 [details] [associations]
symbol:RUG2 "RCC1/UVR8/GEF-like 2" species:3702
"Arabidopsis thaliana" [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0008150 "biological_process" evidence=ND] INTERPRO:IPR000408
Pfam:PF00415 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
HSSP:P18754 EMBL:BT005508 EMBL:AK117526 IPI:IPI00527447
RefSeq:NP_199644.2 UniGene:At.29855 ProteinModelPortal:Q8GYL6
SMR:Q8GYL6 PRIDE:Q8GYL6 EnsemblPlants:AT5G48330.1 GeneID:834886
KEGG:ath:AT5G48330 TAIR:At5g48330 HOGENOM:HOG000238877
InParanoid:Q8GYL6 OMA:SAGHYHS PhylomeDB:Q8GYL6
ProtClustDB:CLSN2680477 ArrayExpress:Q8GYL6 Genevestigator:Q8GYL6
Uniprot:Q8GYL6
Length = 455
Score = 122 (48.0 bits), Expect = 0.00014, P = 0.00014
Identities = 44/170 (25%), Positives = 77/170 (45%)
Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
I G H+L++ + ++ S GS++ G LG + Q + ++ + + ++A H
Sbjct: 291 IACGSDHSLILCHDGTLLSAGSNIYGQLGR---SKQDLGMKPVDITESP--ISIAAGLGH 345
Query: 175 AAFVLQSGQ--VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
+ + G+ + + G N S G +P PR VE G V+AG + +T
Sbjct: 346 SLAICNRGERNILSWGWNRSRQLGR---GKPENLPREVEGFDGESPASVSAGRVHSLCVT 402
Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
+G G +G+LG G + D P P + +E G V+Q AG + L
Sbjct: 403 EKGEAWVWGCGKNGRLGLGSSSDEPEPMLLEDVE--GCVLQAVAGFDHSL 450
Score = 115 (45.5 bits), Expect = 0.00083, P = 0.00083
Identities = 45/183 (24%), Positives = 83/183 (45%)
Query: 117 TTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHA 175
T+G T++ + ++ + G S + G G + + + N PS + +SA H+
Sbjct: 39 TSGERRTVMSFGDGNLGALGLSSSSIPGMGMDAYEPTVVS--NLPS--DISSISAGHYHS 94
Query: 176 AFVLQSGQVFTCGDNSSFCCGHR--DTNRPI-FRPRLVEALKGVPCKQVTAGLNFTGFLT 232
V SG+++ G N G D++R P+ VE L+ V + A + +
Sbjct: 95 LAVTSSGEIWAWGRNDEGQLGRIVIDSSRDSRSEPKRVEGLENVNVQAAFASGVVSAAIG 154
Query: 233 IRGHVHTCGSNTHGQLGHGD-TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
G + G + GQLG G+ ++ P + L VV+++ G + LA+T +G V+
Sbjct: 155 DDGSLWVWGRSKRGQLGLGNGIIEARVPSRVENLA-AEHVVKVSLGWGHALALTVDGKVF 213
Query: 292 SFG 294
+G
Sbjct: 214 GWG 216
>CGD|CAL0001436 [details] [associations]
symbol:ATS1 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0002098 "tRNA
wobble uridine modification" evidence=IEA] [GO:0000226 "microtubule
cytoskeleton organization" evidence=IEA] [GO:0007117 "budding cell
bud growth" evidence=IEA] INTERPRO:IPR000408 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 EMBL:AACQ01000073 PRINTS:PR00633
PROSITE:PS00626 eggNOG:COG5184 KO:K15462 RefSeq:XP_716156.1
ProteinModelPortal:Q5A364 STRING:Q5A364 GeneID:3642213
KEGG:cal:CaO19.13757 CGD:CAL0062057 Uniprot:Q5A364
Length = 336
Score = 118 (46.6 bits), Expect = 0.00023, P = 0.00023
Identities = 38/153 (24%), Positives = 68/153 (44%)
Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCG-HRDTNRPIFRPRLVEALKGVPCKQVTAG 224
++++ NH +L +G+VF+CG N CG R + +F + G ++ G
Sbjct: 46 MKIAGGGNHTMVILDNGEVFSCGSNEFGQCGLPRGESLGVFHK-----VPGNDWLDISCG 100
Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS-IAPLEEVGSVVQIAAGPSYMLA 283
F+ + G V+ CG G+LG G + TP+S + V +I + + +
Sbjct: 101 WEFSILVKRSGEVYVCGRGLKGELGLG----KETPESELIYSTTVDGFKEIKSCMQHTII 156
Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
T NG+V +G+ LG E P+ ++
Sbjct: 157 QTTNGLV-GWGNSRKGQLGETEDKIMWTPKTLR 188
>UNIPROTKB|Q5A364 [details] [associations]
symbol:ATS1 "Putative uncharacterized protein ATS1"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] INTERPRO:IPR000408
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
EMBL:AACQ01000073 PRINTS:PR00633 PROSITE:PS00626 eggNOG:COG5184
KO:K15462 RefSeq:XP_716156.1 ProteinModelPortal:Q5A364
STRING:Q5A364 GeneID:3642213 KEGG:cal:CaO19.13757 CGD:CAL0062057
Uniprot:Q5A364
Length = 336
Score = 118 (46.6 bits), Expect = 0.00023, P = 0.00023
Identities = 38/153 (24%), Positives = 68/153 (44%)
Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCG-HRDTNRPIFRPRLVEALKGVPCKQVTAG 224
++++ NH +L +G+VF+CG N CG R + +F + G ++ G
Sbjct: 46 MKIAGGGNHTMVILDNGEVFSCGSNEFGQCGLPRGESLGVFHK-----VPGNDWLDISCG 100
Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS-IAPLEEVGSVVQIAAGPSYMLA 283
F+ + G V+ CG G+LG G + TP+S + V +I + + +
Sbjct: 101 WEFSILVKRSGEVYVCGRGLKGELGLG----KETPESELIYSTTVDGFKEIKSCMQHTII 156
Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
T NG+V +G+ LG E P+ ++
Sbjct: 157 QTTNGLV-GWGNSRKGQLGETEDKIMWTPKTLR 188
>ZFIN|ZDB-GENE-070402-2 [details] [associations]
symbol:als2a "amyotrophic lateral sclerosis 2a
(juvenile)" species:7955 "Danio rerio" [GO:0035023 "regulation of
Rho protein signal transduction" evidence=IEA] [GO:0005089 "Rho
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0043025 "neuronal
cell body" evidence=ISS] [GO:0030425 "dendrite" evidence=ISS]
[GO:0005769 "early endosome" evidence=ISS] [GO:0016197 "endosomal
transport" evidence=ISS] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=ISS] [GO:0005813 "centrosome" evidence=ISS]
[GO:0014069 "postsynaptic density" evidence=ISS] [GO:0007528
"neuromuscular junction development" evidence=ISS] [GO:0030424
"axon" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0043197 "dendritic spine" evidence=ISS] [GO:0007409
"axonogenesis" evidence=ISS] [GO:0016050 "vesicle organization"
evidence=ISS] [GO:0017137 "Rab GTPase binding" evidence=ISS]
[GO:0017112 "Rab guanyl-nucleotide exchange factor activity"
evidence=ISS] InterPro:IPR000219 Pfam:PF00621 PROSITE:PS50010
INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204 ZFIN:ZDB-GENE-070402-2
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0005622 GO:GO:0005089
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023 InterPro:IPR003409
InterPro:IPR003123 Pfam:PF02493 SMART:SM00698 PROSITE:PS51205
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:BK005193
UniGene:Dr.102729 ProteinModelPortal:I7L9G3 Uniprot:I7L9G3
Length = 1590
Score = 121 (47.7 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 41/108 (37%), Positives = 51/108 (47%)
Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
V + G GQLGHGD L R P I L + VV+I AG ++ LA+T VYS+GS
Sbjct: 522 VWSWGKGHEGQLGHGDYLPRLQPLCIKSLSKK-EVVKITAGANHSLALTAQCQVYSWGSE 580
Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGY 343
LG + P T GI V V+AG H + L D Y
Sbjct: 581 KFGQLGRMNSPSTV-PNL--TTVSDGIRVWDVAAGQTHTLLLADGDCY 625
Score = 47 (21.6 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 17/68 (25%), Positives = 30/68 (44%)
Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
+ + G HTL +SN V++ GS C LG ++ +VVQ++
Sbjct: 142 LNVACGAQHTLALSNKHEVWAWGSG-CQ-LGLVTNVFPVWKPQKVEHLVGRYVVQIACGA 199
Query: 173 NHAAFVLQ 180
H+ ++Q
Sbjct: 200 FHSLALVQ 207
>UNIPROTKB|E1BX75 [details] [associations]
symbol:ALS2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005543 "phospholipid binding" evidence=IEA]
[GO:0001662 "behavioral fear response" evidence=IEA] [GO:0001726
"ruffle" evidence=IEA] [GO:0001881 "receptor recycling"
evidence=IEA] [GO:0005769 "early endosome" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0007626 "locomotory behavior" evidence=IEA]
[GO:0008104 "protein localization" evidence=IEA] [GO:0014069
"postsynaptic density" evidence=IEA] [GO:0016050 "vesicle
organization" evidence=IEA] [GO:0016197 "endosomal transport"
evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange factor
activity" evidence=IEA] [GO:0017137 "Rab GTPase binding"
evidence=IEA] [GO:0030027 "lamellipodium" evidence=IEA] [GO:0030676
"Rac guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0031982 "vesicle" evidence=IEA] [GO:0032313 "regulation of Rab
GTPase activity" evidence=IEA] [GO:0032855 "positive regulation of
Rac GTPase activity" evidence=IEA] [GO:0035249 "synaptic
transmission, glutamatergic" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0043234 "protein
complex" evidence=IEA] [GO:0043539 "protein serine/threonine kinase
activator activity" evidence=IEA] [GO:0048812 "neuron projection
morphogenesis" evidence=IEA] [GO:0051036 "regulation of endosome
size" evidence=IEA] InterPro:IPR000219 InterPro:IPR001849
Pfam:PF00621 PROSITE:PS50003 PROSITE:PS50010 SMART:SM00233
INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204 GO:GO:0005829
GO:GO:0005813 GO:GO:0043234 GO:GO:0014069 GO:GO:0008104
GO:GO:0006979 GO:GO:0005543 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0043539 GO:GO:0016197 Gene3D:1.20.900.10 SUPFAM:SSF48065
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493 SMART:SM00698
PROSITE:PS51205 GeneTree:ENSGT00600000084242 OMA:AKPAIDF
GO:GO:0005769 GO:GO:0017112 GO:GO:0030676 GO:GO:0032855
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:AADN02019863
IPI:IPI00580588 Ensembl:ENSGALT00000013707 Uniprot:E1BX75
Length = 1651
Score = 121 (47.7 bits), Expect = 0.00091, P = 0.00091
Identities = 29/72 (40%), Positives = 40/72 (55%)
Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
++R V + G GQLGHGD L R P + L+ V+Q++AG + LA+T VY
Sbjct: 518 SLRTEVWSWGRGKDGQLGHGDVLPRLQPLCVKSLDGK-EVIQLSAGGHHSLALTAKSQVY 576
Query: 292 SFGSGSNFCLGH 303
S+GS LGH
Sbjct: 577 SWGSNIFGQLGH 588
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.135 0.408 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 348 348 0.00099 116 3 11 22 0.37 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 209
No. of states in DFA: 609 (65 KB)
Total size of DFA: 224 KB (2122 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 26.04u 0.14s 26.18t Elapsed: 00:00:02
Total cpu time: 26.13u 0.15s 26.28t Elapsed: 00:00:02
Start: Fri May 10 14:11:09 2013 End: Fri May 10 14:11:11 2013
WARNINGS ISSUED: 1