BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 018985
         (348 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|255575340|ref|XP_002528573.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223532017|gb|EEF33828.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 497

 Score =  582 bits (1501), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 281/344 (81%), Positives = 306/344 (88%)

Query: 1   MADRYRLFSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLA 60
           MAD+YRL SI+ELPSHLI EIL +GRLSA DL  LELTSKTFGGSHGLYP KF+SLVD A
Sbjct: 1   MADKYRLVSIDELPSHLILEILMTGRLSATDLVCLELTSKTFGGSHGLYPHKFKSLVDFA 60

Query: 61  ASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGR 120
           A QLCA HS+Y GM  N Q ELL+RC GNWKRVLRFL +VE SS +VETSAGNMQITTGR
Sbjct: 61  AFQLCASHSVYTGMLWNAQKELLDRCGGNWKRVLRFLLAVEESSGMVETSAGNMQITTGR 120

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           YHTLLISNSSV+SCGSSLCGVLGHGPETTQCVSF+RI FPS A VVQVSAS NHAA++L+
Sbjct: 121 YHTLLISNSSVYSCGSSLCGVLGHGPETTQCVSFSRITFPSLARVVQVSASHNHAAYILE 180

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           SG+VFTCGDNSSFCCGH+DT+RPIFRPR VEALKGVPCKQV AGLNFT FLT  GHV++C
Sbjct: 181 SGEVFTCGDNSSFCCGHQDTSRPIFRPRFVEALKGVPCKQVAAGLNFTVFLTRTGHVYSC 240

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
           G+NTHGQLGHGDTLDRPTPK I   E +GSV QIAAGPSY+LAVT +GVVYSFGSGSNFC
Sbjct: 241 GTNTHGQLGHGDTLDRPTPKIIESFEGIGSVAQIAAGPSYVLAVTDSGVVYSFGSGSNFC 300

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           LGHGEQH+E  PRAIQTFRRK +HVVRVSAGDEHVVALDSSG+V
Sbjct: 301 LGHGEQHNEFHPRAIQTFRRKNLHVVRVSAGDEHVVALDSSGFV 344



 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 68/213 (31%), Positives = 86/213 (40%), Gaps = 21/213 (9%)

Query: 115 QITTGRYHTLLISNSSV---FSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAH 164
           QI  G  + L +++S V   F  GS+ C  LGHG       P   Q  +F R N     H
Sbjct: 273 QIAAGPSYVLAVTDSGVVYSFGSGSNFC--LGHGEQHNEFHPRAIQ--TFRRKNL----H 324

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           VV+VSA + H   +  SG V+T G       GH D       P  + +LK     QV A 
Sbjct: 325 VVRVSAGDEHVVALDSSGFVYTWGKGYCGALGHGDEIDKTL-PEPLNSLKSHLAVQVCAR 383

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGD--TLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
              T  L   G V   G    G LG  D    D+     I        V QI+ G  + +
Sbjct: 384 KRKTFVLVDGGCVFGFGWMGFGSLGFPDRGVSDKVMRPRILDSLRAHRVSQISTGLYHTV 443

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAI 315
           AVT  G V+ FG      LGH      L+P  I
Sbjct: 444 AVTSQGQVFGFGDNERAQLGHDTLRGCLEPTEI 476



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 75/166 (45%), Gaps = 10/166 (6%)

Query: 106 IVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV 165
           +V  SAG+  +        L S+  V++ G   CG LGHG E  + +    +N   +   
Sbjct: 325 VVRVSAGDEHVVA------LDSSGFVYTWGKGYCGALGHGDEIDKTLP-EPLNSLKSHLA 377

Query: 166 VQVSASENHAAFVLQSGQVFTCG--DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
           VQV A +     ++  G VF  G     S     R  +  + RPR++++L+     Q++ 
Sbjct: 378 VQVCARKRKTFVLVDGGCVFGFGWMGFGSLGFPDRGVSDKVMRPRILDSLRAHRVSQIST 437

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 269
           GL  T  +T +G V   G N   QLGH DTL      +   L+E G
Sbjct: 438 GLYHTVAVTSQGQVFGFGDNERAQLGH-DTLRGCLEPTEIFLQEFG 482



 Score = 52.0 bits (123), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 64/129 (49%), Gaps = 4/129 (3%)

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
           Q+T G   T  L     V++CGS+  G LGHG    +    S      +  VVQ++A  +
Sbjct: 115 QITTGRYHT-LLISNSSVYSCGSSLCGVLGHGPETTQCVSFSRITFPSLARVVQVSASHN 173

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           +   +  +G V++ G  S+FC GH +    + +PR ++    KG+   +V+AG    V L
Sbjct: 174 HAAYILESGEVFTCGDNSSFCCGHQDTSRPIFRPRFVEAL--KGVPCKQVAAGLNFTVFL 231

Query: 339 DSSGYVSLC 347
             +G+V  C
Sbjct: 232 TRTGHVYSC 240


>gi|224114984|ref|XP_002316910.1| predicted protein [Populus trichocarpa]
 gi|222859975|gb|EEE97522.1| predicted protein [Populus trichocarpa]
          Length = 478

 Score =  573 bits (1477), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 279/344 (81%), Positives = 302/344 (87%)

Query: 1   MADRYRLFSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLA 60
           MAD+ R  SIE+LPSHLIFEILT+GRLSAVDLA LELTS+TFGGSHGLYPQKFRSLVD A
Sbjct: 1   MADKNRSVSIEDLPSHLIFEILTTGRLSAVDLACLELTSRTFGGSHGLYPQKFRSLVDFA 60

Query: 61  ASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGR 120
           A QLC  H +Y+GM  N Q  L  RC GNWKRVLRFLQ+VE SS +V+TSA NMQ+TTGR
Sbjct: 61  AYQLCVSHRVYSGMGWNAQKGLFGRCEGNWKRVLRFLQAVEESSGMVKTSASNMQVTTGR 120

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           YHTLLI +SSV+SCGSSLCGVLGHG ETTQCV+FTRI FPS A+V+QVSAS NHAAFVLQ
Sbjct: 121 YHTLLIRDSSVYSCGSSLCGVLGHGAETTQCVAFTRIRFPSLAYVIQVSASHNHAAFVLQ 180

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           SG+VFTCGDNSSFCCGH DTNRPIFRPRLVEALKGVPCKQV  GLNFT FLT +G ++TC
Sbjct: 181 SGEVFTCGDNSSFCCGHNDTNRPIFRPRLVEALKGVPCKQVAVGLNFTVFLTRQGQLYTC 240

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
           G+NTHGQLGHGDT DRPTPK I  LE VGSVVQIAAGPSY+LAVT NGVVYSFGSGSN C
Sbjct: 241 GTNTHGQLGHGDTQDRPTPKIIELLEGVGSVVQIAAGPSYVLAVTDNGVVYSFGSGSNLC 300

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           LGHGEQHDE +PRAIQTFRRK IHVV VSAGDEH VALDSSG+V
Sbjct: 301 LGHGEQHDEFRPRAIQTFRRKDIHVVHVSAGDEHAVALDSSGFV 344



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 103/234 (44%), Gaps = 10/234 (4%)

Query: 115 QITTG-RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+  G  +   L     +++CG++  G LGHG    +              VVQ++A  +
Sbjct: 220 QVAVGLNFTVFLTRQGQLYTCGTNTHGQLGHGDTQDRPTPKIIELLEGVGSVVQIAAGPS 279

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL--KGVPCKQVTAGLNFTGFL 231
           +   V  +G V++ G  S+ C GH + +   FRPR ++    K +    V+AG      L
Sbjct: 280 YVLAVTDNGVVYSFGSGSNLCLGHGEQHDE-FRPRAIQTFRRKDIHVVHVSAGDEHAVAL 338

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
              G V++ G    G LGHGD +D+  P  +  L+     VQ+ A       +   G VY
Sbjct: 339 DSSGFVYSWGKGYCGALGHGDEIDKTLPALVNCLKS-HLAVQVCARKRKTFVLVDGGSVY 397

Query: 292 SFGSGSNFCLG---HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            FG      LG    G     ++PR + + R +  HV ++S G  H V + + G
Sbjct: 398 GFGWMGFGSLGFPDRGLSDKVMRPRVLDSLRAR--HVSQISTGLYHTVVVTNQG 449



 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 68/223 (30%), Positives = 92/223 (41%), Gaps = 21/223 (9%)

Query: 105 DIVETSAGNMQITTGRYHTLLISNSSV---FSCGSSLCGVLGHG-------PETTQCVSF 154
           +++E     +QI  G  + L ++++ V   F  GS+LC  LGHG       P   Q  +F
Sbjct: 263 ELLEGVGSVVQIAAGPSYVLAVTDNGVVYSFGSGSNLC--LGHGEQHDEFRPRAIQ--TF 318

Query: 155 TRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK 214
            R +     HVV VSA + HA  +  SG V++ G       GH D       P LV  LK
Sbjct: 319 RRKDI----HVVHVSAGDEHAVALDSSGFVYSWGKGYCGALGHGDEIDKTL-PALVNCLK 373

Query: 215 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT--LDRPTPKSIAPLEEVGSVV 272
                QV A    T  L   G V+  G    G LG  D    D+     +        V 
Sbjct: 374 SHLAVQVCARKRKTFVLVDGGSVYGFGWMGFGSLGFPDRGLSDKVMRPRVLDSLRARHVS 433

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAI 315
           QI+ G  + + VT  G ++ FG      LGH      LQP  I
Sbjct: 434 QISTGLYHTVVVTNQGQMFGFGDNERAQLGHDTLRGCLQPTEI 476


>gi|224128193|ref|XP_002329104.1| predicted protein [Populus trichocarpa]
 gi|222869773|gb|EEF06904.1| predicted protein [Populus trichocarpa]
          Length = 492

 Score =  572 bits (1475), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 278/344 (80%), Positives = 300/344 (87%)

Query: 1   MADRYRLFSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLA 60
           MA+RYRL SIE+ PSHLIFEILT GRLSA DL  LELTS+TFG SHGLYPQKFRSLVD A
Sbjct: 1   MANRYRLASIEDFPSHLIFEILTIGRLSAADLVCLELTSRTFGASHGLYPQKFRSLVDFA 60

Query: 61  ASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGR 120
           A QLC  H +Y GM  N Q EL +RC GNWKRVLRFLQ+VE SS +V+TSA NMQ+TTGR
Sbjct: 61  AHQLCVSHRVYGGMGWNAQKELFDRCGGNWKRVLRFLQAVEESSGMVKTSACNMQVTTGR 120

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           YHTLLI +SSV+SCGSSLCGVLGHG ETTQCV+FTRI FPS A+VVQVSAS NHAAFVLQ
Sbjct: 121 YHTLLIRDSSVYSCGSSLCGVLGHGAETTQCVAFTRIRFPSLANVVQVSASHNHAAFVLQ 180

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           SG+VFTCGDNSSFCCGH+DTNRPIFRPRLVEALK V CKQV+ GLNFT FLT +G ++TC
Sbjct: 181 SGEVFTCGDNSSFCCGHKDTNRPIFRPRLVEALKAVSCKQVSVGLNFTVFLTRQGQLYTC 240

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
           GSNTHGQLGHGDTLDRPTPK I  LE +G VVQIAAGPSY+LAVT NGVVYSFG GSNFC
Sbjct: 241 GSNTHGQLGHGDTLDRPTPKIIELLEGIGPVVQIAAGPSYVLAVTDNGVVYSFGYGSNFC 300

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           LGHGEQHDE QPRAIQTFRRK IHVV VSAGDEH VALDSSG+V
Sbjct: 301 LGHGEQHDEFQPRAIQTFRRKDIHVVHVSAGDEHAVALDSSGFV 344



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 69/224 (30%), Positives = 93/224 (41%), Gaps = 23/224 (10%)

Query: 105 DIVETSAGNMQITTGRYHTLLISNSSV---FSCGSSLCGVLGHG-------PETTQCVSF 154
           +++E     +QI  G  + L ++++ V   F  GS+ C  LGHG       P   Q  +F
Sbjct: 263 ELLEGIGPVVQIAAGPSYVLAVTDNGVVYSFGYGSNFC--LGHGEQHDEFQPRAIQ--TF 318

Query: 155 TRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK 214
            R +     HVV VSA + HA  +  SG V++ G       GH D       P LV  LK
Sbjct: 319 RRKDI----HVVHVSAGDEHAVALDSSGFVYSWGKGYCGALGHGDEIDKTL-PSLVNCLK 373

Query: 215 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD---TLDRPTPKSIAPLEEVGSV 271
                Q  A    T  L   G V+  G    G LG  D   T    TP+ +  L     V
Sbjct: 374 SRLAVQACARKRKTFVLVDDGSVYGFGCMGFGSLGFPDRDITEKVMTPRVLDSLR-AHRV 432

Query: 272 VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAI 315
            QI+ G  + + VT  G ++ FG      LGH      LQP  I
Sbjct: 433 SQISTGLYHTVVVTNQGQMFGFGDNERVQLGHDTLRGCLQPTEI 476


>gi|147820281|emb|CAN60415.1| hypothetical protein VITISV_023540 [Vitis vinifera]
          Length = 511

 Score =  566 bits (1458), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 274/344 (79%), Positives = 301/344 (87%)

Query: 1   MADRYRLFSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLA 60
           MA+RY   S EELPSHLI EIL+SGRLSAVDL  LELTS+TFG SHGLYP KFRSLVD A
Sbjct: 1   MANRYWSVSFEELPSHLILEILSSGRLSAVDLVCLELTSRTFGASHGLYPHKFRSLVDFA 60

Query: 61  ASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGR 120
           A QLC  H IYA +S N Q +L +RC  NWKRVLRFLQSVE SS I ETSAGNMQITTGR
Sbjct: 61  AFQLCGSHPIYAALSLNAQKDLFDRCGENWKRVLRFLQSVEQSSYISETSAGNMQITTGR 120

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           YHTLLI +SSV+SCGSSLCGVLGHGPETTQCV+F+RINFP  AHV QVSAS NHAAFV+Q
Sbjct: 121 YHTLLIKDSSVYSCGSSLCGVLGHGPETTQCVAFSRINFPPLAHVAQVSASHNHAAFVMQ 180

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           SG+VFTCGDNSSFCCGH DT RPIFRPRLVEALKGVPCKQV AGL+FT FLT++GHV+TC
Sbjct: 181 SGEVFTCGDNSSFCCGHGDTVRPIFRPRLVEALKGVPCKQVAAGLSFTVFLTMKGHVYTC 240

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
           G+NTHGQLGHGDT+DR TPK +  LE VG VVQIAAGPSY +AVT +G V+SFGSGSNFC
Sbjct: 241 GTNTHGQLGHGDTVDRRTPKIVELLEGVGPVVQIAAGPSYAMAVTDDGTVHSFGSGSNFC 300

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           LGHGEQH+EL+PRAIQ+FRRK IHVVR+SAGDEHVVALDSSG+V
Sbjct: 301 LGHGEQHNELRPRAIQSFRRKTIHVVRISAGDEHVVALDSSGFV 344



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 60/246 (24%), Positives = 98/246 (39%), Gaps = 58/246 (23%)

Query: 115 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+  G   T+ ++    V++CG++  G LGHG    +              VVQ++A  +
Sbjct: 220 QVAAGLSFTVFLTMKGHVYTCGTNTHGQLGHGDTVDRRTPKIVELLEGVGPVVQIAAGPS 279

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL--KGVPCKQVTAGLNFTGFL 231
           +A  V   G V + G  S+FC GH + +  + RPR +++   K +   +++AG      L
Sbjct: 280 YAMAVTDDGTVHSFGSGSNFCLGHGEQHNEL-RPRAIQSFRRKTIHVVRISAGDEHVVAL 338

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE------------------EVGSVV- 272
              G V+T G    G LGHGD +D+ TP+ ++ L+                  + GSV  
Sbjct: 339 DSSGFVYTWGKGYCGALGHGDEIDKTTPEILSSLKSHLAVQVCARKRKTFVLVDTGSVYG 398

Query: 273 -----------------------------------QIAAGPSYMLAVTGNGVVYSFGSGS 297
                                              QI+ G  + +AV   G ++ FG   
Sbjct: 399 FGWMGFGSLGFPDRGASDKVMRPWILDSLRGHYISQISTGLYHTVAVXNKGQIFGFGDNE 458

Query: 298 NFCLGH 303
              LGH
Sbjct: 459 RAQLGH 464



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 4/152 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           ++I+ G  H + + +S  V++ G   CG LGHG E  +       +  S    VQV A +
Sbjct: 326 VRISAGDEHVVALDSSGFVYTWGKGYCGALGHGDEIDKTTPEILSSLKSHL-AVQVCARK 384

Query: 173 NHAAFVLQSGQVFTCG--DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
                ++ +G V+  G     S     R  +  + RP ++++L+G    Q++ GL  T  
Sbjct: 385 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGASDKVMRPWILDSLRGHYISQISTGLYHTVA 444

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           +  +G +   G N   QLGH      P P  I
Sbjct: 445 VXNKGQIFGFGDNERAQLGHDTLRGCPVPTEI 476



 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 63/129 (48%), Gaps = 4/129 (3%)

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
           Q+T G   T  L     V++CGS+  G LGHG    +    S      +  V Q++A  +
Sbjct: 115 QITTGRYHT-LLIKDSSVYSCGSSLCGVLGHGPETTQCVAFSRINFPPLAHVAQVSASHN 173

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           +   V  +G V++ G  S+FC GHG+    + +PR ++    KG+   +V+AG    V L
Sbjct: 174 HAAFVMQSGEVFTCGDNSSFCCGHGDTVRPIFRPRLVEAL--KGVPCKQVAAGLSFTVFL 231

Query: 339 DSSGYVSLC 347
              G+V  C
Sbjct: 232 TMKGHVYTC 240


>gi|225461391|ref|XP_002284809.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2 [Vitis
           vinifera]
 gi|302143037|emb|CBI20332.3| unnamed protein product [Vitis vinifera]
          Length = 492

 Score =  564 bits (1454), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 274/344 (79%), Positives = 301/344 (87%)

Query: 1   MADRYRLFSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLA 60
           MA+RY   S EELPSHLI EIL+SGRLSAVDL  LELTS+TFG SHGLYP KFRSLVD A
Sbjct: 1   MANRYWSVSFEELPSHLILEILSSGRLSAVDLVCLELTSRTFGASHGLYPHKFRSLVDFA 60

Query: 61  ASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGR 120
           A QLC  H IYA +S N Q +L +RC  NWKRVLRFLQSVE SS I ETSAGNMQITTGR
Sbjct: 61  AFQLCGSHPIYAALSLNAQKDLFDRCGENWKRVLRFLQSVEQSSYISETSAGNMQITTGR 120

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           YHTLLI +SSV+SCGSSLCGVLGHGPETTQCV+F+RINFP  AHV QVSAS NHAAFV+Q
Sbjct: 121 YHTLLIKDSSVYSCGSSLCGVLGHGPETTQCVAFSRINFPPLAHVAQVSASHNHAAFVMQ 180

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           SG+VFTCGDNSSFCCGH DT RPIFRPRLVEALKGVPCKQV AGL+FT FLT++GHV+TC
Sbjct: 181 SGEVFTCGDNSSFCCGHGDTVRPIFRPRLVEALKGVPCKQVAAGLSFTVFLTMKGHVYTC 240

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
           G+NTHGQLGHGDT+DR TPK +  LE VG VVQIAAGPSY +AVT +G V+SFGSGSNFC
Sbjct: 241 GTNTHGQLGHGDTVDRRTPKIVELLEGVGPVVQIAAGPSYAMAVTDDGTVHSFGSGSNFC 300

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           LGHGEQH+EL+PRAIQ+FRRK IHVVR+SAGDEHVVALDSSG+V
Sbjct: 301 LGHGEQHNELRPRAIQSFRRKTIHVVRISAGDEHVVALDSSGFV 344



 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 60/246 (24%), Positives = 98/246 (39%), Gaps = 58/246 (23%)

Query: 115 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+  G   T+ ++    V++CG++  G LGHG    +              VVQ++A  +
Sbjct: 220 QVAAGLSFTVFLTMKGHVYTCGTNTHGQLGHGDTVDRRTPKIVELLEGVGPVVQIAAGPS 279

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL--KGVPCKQVTAGLNFTGFL 231
           +A  V   G V + G  S+FC GH + +  + RPR +++   K +   +++AG      L
Sbjct: 280 YAMAVTDDGTVHSFGSGSNFCLGHGEQHNEL-RPRAIQSFRRKTIHVVRISAGDEHVVAL 338

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE------------------EVGSVV- 272
              G V+T G    G LGHGD +D+ TP+ ++ L+                  + GSV  
Sbjct: 339 DSSGFVYTWGKGYCGALGHGDEIDKTTPEILSSLKSHLAVQVCARKRKTFVLVDTGSVYG 398

Query: 273 -----------------------------------QIAAGPSYMLAVTGNGVVYSFGSGS 297
                                              QI+ G  + +AV   G ++ FG   
Sbjct: 399 FGWMGFGSLGFPDRGASDKVMRPWILDSLRGHYISQISTGLYHTVAVNNKGQIFGFGDNE 458

Query: 298 NFCLGH 303
              LGH
Sbjct: 459 RAQLGH 464



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 4/152 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           ++I+ G  H + + +S  V++ G   CG LGHG E  +       +  S    VQV A +
Sbjct: 326 VRISAGDEHVVALDSSGFVYTWGKGYCGALGHGDEIDKTTPEILSSLKSHL-AVQVCARK 384

Query: 173 NHAAFVLQSGQVFTCG--DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
                ++ +G V+  G     S     R  +  + RP ++++L+G    Q++ GL  T  
Sbjct: 385 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGASDKVMRPWILDSLRGHYISQISTGLYHTVA 444

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           +  +G +   G N   QLGH      P P  I
Sbjct: 445 VNNKGQIFGFGDNERAQLGHDTLRGCPVPTEI 476



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 63/129 (48%), Gaps = 4/129 (3%)

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
           Q+T G   T  L     V++CGS+  G LGHG    +    S      +  V Q++A  +
Sbjct: 115 QITTGRYHT-LLIKDSSVYSCGSSLCGVLGHGPETTQCVAFSRINFPPLAHVAQVSASHN 173

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           +   V  +G V++ G  S+FC GHG+    + +PR ++    KG+   +V+AG    V L
Sbjct: 174 HAAFVMQSGEVFTCGDNSSFCCGHGDTVRPIFRPRLVEAL--KGVPCKQVAAGLSFTVFL 231

Query: 339 DSSGYVSLC 347
              G+V  C
Sbjct: 232 TMKGHVYTC 240


>gi|356549747|ref|XP_003543252.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 485

 Score =  553 bits (1426), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 272/344 (79%), Positives = 297/344 (86%), Gaps = 3/344 (0%)

Query: 1   MADRYRLFSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLA 60
           M +R R FSIEELPSHL+ EIL SGRLSA+DL  LELTSKTFGGSHGL+P KF+SLV  A
Sbjct: 1   MGERCRHFSIEELPSHLVLEILCSGRLSAMDLVCLELTSKTFGGSHGLHPFKFKSLVAFA 60

Query: 61  ASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGR 120
           A QLCA H  YA M  N Q EL +RC GNWKRVLRFLQSVE SS +VETS+GNMQITTG+
Sbjct: 61  AFQLCASHVTYARMGLNSQRELYDRCGGNWKRVLRFLQSVEQSSQMVETSSGNMQITTGK 120

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           YHTLLISNSSV+SCGS LCGVLG G ETTQCV+FTRI+FP  A VV VSAS NHAAFV+Q
Sbjct: 121 YHTLLISNSSVYSCGSGLCGVLGQGSETTQCVAFTRIDFPPLARVVHVSASFNHAAFVMQ 180

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           SG+VFTCGDNSS CCGHRDT RPIFRPRLVE+LKG+PCKQV AGLNFT FLT +GHV+TC
Sbjct: 181 SGEVFTCGDNSSSCCGHRDTTRPIFRPRLVESLKGIPCKQVAAGLNFTVFLTRKGHVYTC 240

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
           G+NTHGQLGHGDT DRPTPK I   E + SVVQIAAGPSY+L+VT NG VYSFGSG+NFC
Sbjct: 241 GTNTHGQLGHGDTQDRPTPKMI---EVLSSVVQIAAGPSYILSVTENGTVYSFGSGANFC 297

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           LGHGEQHDELQPRAIQ FRRKGIH+VRVSAGDEH VALDS+GYV
Sbjct: 298 LGHGEQHDELQPRAIQKFRRKGIHIVRVSAGDEHAVALDSNGYV 341



 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 97/219 (44%), Gaps = 9/219 (4%)

Query: 103 SSDIVETSAGNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP- 160
           +  ++E  +  +QI  G  + L ++ N +V+S GS     LGHG +  +        F  
Sbjct: 258 TPKMIEVLSSVVQIAAGPSYILSVTENGTVYSFGSGANFCLGHGEQHDELQPRAIQKFRR 317

Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
              H+V+VSA + HA  +  +G V+T G       GH D       P L+ +LK     Q
Sbjct: 318 KGIHIVRVSAGDEHAVALDSNGYVYTWGKGYCGALGHGDEIEKT-TPELLTSLKNQLVVQ 376

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP--LEEVGS--VVQIAA 276
           V A    T  L   G V+  GS   G LG  D   R + K + P  L+ + +  V QI+ 
Sbjct: 377 VCARKRKTFVLVDSGSVYGFGSMGFGSLGFLDR--RVSDKVLKPRILDTLRTHHVSQIST 434

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAI 315
           G  + + +T  G ++ FG      LGH      L+P  I
Sbjct: 435 GLYHTVVITSRGQIFGFGDNERAQLGHDTLRSCLEPTEI 473



 Score = 61.2 bits (147), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 51/167 (30%), Positives = 74/167 (44%), Gaps = 13/167 (7%)

Query: 106 IVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV 165
           IV  SAG+       +   L SN  V++ G   CG LGHG E  +       +  +   V
Sbjct: 322 IVRVSAGD------EHAVALDSNGYVYTWGKGYCGALGHGDEIEKTTPELLTSLKNQL-V 374

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCG--HRDTNRPIFRPRLVEALKGVPCKQVTA 223
           VQV A +     ++ SG V+  G       G   R  +  + +PR+++ L+     Q++ 
Sbjct: 375 VQVCARKRKTFVLVDSGSVYGFGSMGFGSLGFLDRRVSDKVLKPRILDTLRTHHVSQIST 434

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD---RPTPKSIAPLEE 267
           GL  T  +T RG +   G N   QLGH DTL     PT   I  + E
Sbjct: 435 GLYHTVVITSRGQIFGFGDNERAQLGH-DTLRSCLEPTEIFIKDVSE 480



 Score = 44.7 bits (104), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 60/129 (46%), Gaps = 4/129 (3%)

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
           Q+T G  +   L     V++CGS   G LG G    +    +      +  VV ++A  +
Sbjct: 115 QITTG-KYHTLLISNSSVYSCGSGLCGVLGQGSETTQCVAFTRIDFPPLARVVHVSASFN 173

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           +   V  +G V++ G  S+ C GH +    + +PR +++   KGI   +V+AG    V L
Sbjct: 174 HAAFVMQSGEVFTCGDNSSSCCGHRDTTRPIFRPRLVESL--KGIPCKQVAAGLNFTVFL 231

Query: 339 DSSGYVSLC 347
              G+V  C
Sbjct: 232 TRKGHVYTC 240


>gi|255646519|gb|ACU23737.1| unknown [Glycine max]
          Length = 485

 Score =  552 bits (1422), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 271/344 (78%), Positives = 297/344 (86%), Gaps = 3/344 (0%)

Query: 1   MADRYRLFSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLA 60
           M +R R FSIEELPSHL+ EIL SGRLSA+DL  LELTSKTFGGSHGL+P KF+SLV  A
Sbjct: 1   MGERCRHFSIEELPSHLVLEILCSGRLSAMDLVCLELTSKTFGGSHGLHPFKFKSLVAFA 60

Query: 61  ASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGR 120
           A QLCA H  YA M  N Q EL +RC GNWKRVLRFLQSVE SS +VETS+GNMQITTG+
Sbjct: 61  AFQLCASHVTYARMGLNSQRELYDRCGGNWKRVLRFLQSVEQSSQMVETSSGNMQITTGK 120

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           YHTLLISNSSV+SCGS LCGVLG G ETTQCV+FTRI+FP  A VV VSAS NHAAFV+Q
Sbjct: 121 YHTLLISNSSVYSCGSGLCGVLGQGSETTQCVAFTRIDFPPLARVVHVSASFNHAAFVMQ 180

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           SG+VFTCGDNSS CCGHRDT RPIF+PRLVE+LKG+PCKQV AGLNFT FLT +GHV+TC
Sbjct: 181 SGEVFTCGDNSSSCCGHRDTTRPIFKPRLVESLKGIPCKQVAAGLNFTVFLTRKGHVYTC 240

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
           G+NTHGQLGHGDT DRPTPK I   E + SVVQIAAGPSY+L+VT NG VYSFGSG+NFC
Sbjct: 241 GTNTHGQLGHGDTQDRPTPKMI---EVLSSVVQIAAGPSYILSVTENGTVYSFGSGANFC 297

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           LGHGEQHDELQPRAIQ FRRKGIH+VRVSAGDEH VALDS+GYV
Sbjct: 298 LGHGEQHDELQPRAIQKFRRKGIHIVRVSAGDEHAVALDSNGYV 341



 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 97/219 (44%), Gaps = 9/219 (4%)

Query: 103 SSDIVETSAGNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP- 160
           +  ++E  +  +QI  G  + L ++ N +V+S GS     LGHG +  +        F  
Sbjct: 258 TPKMIEVLSSVVQIAAGPSYILSVTENGTVYSFGSGANFCLGHGEQHDELQPRAIQKFRR 317

Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
              H+V+VSA + HA  +  +G V+T G       GH D       P L+ +LK     Q
Sbjct: 318 KGIHIVRVSAGDEHAVALDSNGYVYTWGKGYCGALGHGDEIEKT-TPELLTSLKNQLVVQ 376

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP--LEEVGS--VVQIAA 276
           V A    T  L   G V+  GS   G LG  D   R + K + P  L+ + +  V QI+ 
Sbjct: 377 VCARKRKTFVLVDSGSVYGFGSMGFGSLGFLDR--RVSGKVLKPRILDTLRTHHVSQIST 434

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAI 315
           G  + + +T  G ++ FG      LGH      L+P  I
Sbjct: 435 GLYHTVVITSRGQIFGFGDNERAQLGHDILRSCLEPTEI 473



 Score = 44.7 bits (104), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 60/129 (46%), Gaps = 4/129 (3%)

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
           Q+T G  +   L     V++CGS   G LG G    +    +      +  VV ++A  +
Sbjct: 115 QITTG-KYHTLLISNSSVYSCGSGLCGVLGQGSETTQCVAFTRIDFPPLARVVHVSASFN 173

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           +   V  +G V++ G  S+ C GH +    + +PR +++   KGI   +V+AG    V L
Sbjct: 174 HAAFVMQSGEVFTCGDNSSSCCGHRDTTRPIFKPRLVESL--KGIPCKQVAAGLNFTVFL 231

Query: 339 DSSGYVSLC 347
              G+V  C
Sbjct: 232 TRKGHVYTC 240


>gi|356544020|ref|XP_003540454.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
           max]
          Length = 485

 Score =  546 bits (1408), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 269/344 (78%), Positives = 294/344 (85%), Gaps = 3/344 (0%)

Query: 1   MADRYRLFSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLA 60
           M DR R FSIEELPSHL+ EIL SGRLSA+DL  LELTSKTFGGSHGL+P KF+SLVD A
Sbjct: 1   MGDRCRHFSIEELPSHLVLEILCSGRLSAMDLVCLELTSKTFGGSHGLHPFKFKSLVDFA 60

Query: 61  ASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGR 120
           A QLCA H  +A M  N Q EL +RC GNWKRVLRFLQSVE SS +VETS GNMQITTG+
Sbjct: 61  AFQLCASHVTFARMGLNSQRELYDRCGGNWKRVLRFLQSVEQSSQMVETSLGNMQITTGK 120

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           YHTLLISNSSV+SCGS LCGVLG G ETTQCV+FTRI+ P    VV VSAS NHAAFV+Q
Sbjct: 121 YHTLLISNSSVYSCGSGLCGVLGQGSETTQCVAFTRIDSPPLPRVVHVSASFNHAAFVMQ 180

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           SG+VFTCGDNSS CCGHRDT RPIFRPRLVE+LKG+PCKQV AGLNFT FLT +GHV+TC
Sbjct: 181 SGEVFTCGDNSSSCCGHRDTTRPIFRPRLVESLKGIPCKQVAAGLNFTVFLTRQGHVYTC 240

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
           G+NTHGQLGHGDT DRPTPK I   E + SVVQIAAGPSY+L+VT NG VYSFGSG+NFC
Sbjct: 241 GTNTHGQLGHGDTQDRPTPKMI---EVLSSVVQIAAGPSYILSVTENGTVYSFGSGANFC 297

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           LGHGEQHDELQPR IQ FRRKGIH+VRVSAGDEH VALDS+G+V
Sbjct: 298 LGHGEQHDELQPRPIQKFRRKGIHIVRVSAGDEHAVALDSNGFV 341



 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 97/219 (44%), Gaps = 9/219 (4%)

Query: 103 SSDIVETSAGNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP- 160
           +  ++E  +  +QI  G  + L ++ N +V+S GS     LGHG +  +        F  
Sbjct: 258 TPKMIEVLSSVVQIAAGPSYILSVTENGTVYSFGSGANFCLGHGEQHDELQPRPIQKFRR 317

Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
              H+V+VSA + HA  +  +G V+T G       GH D       P L+ +LK     Q
Sbjct: 318 KGIHIVRVSAGDEHAVALDSNGFVYTWGKGYCGALGHGDEIEKT-TPELLTSLKNQLAVQ 376

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP--LEEVGS--VVQIAA 276
           V A    T  L   G V+  GS   G LG  D   R + K + P  L+ + +  V QI+ 
Sbjct: 377 VCARKRKTFVLVNSGSVYGFGSMGFGSLGFLDR--RVSDKVLKPRILDTLRAHHVSQIST 434

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAI 315
           G  + + +T  G ++ FG      LGH      L+P  I
Sbjct: 435 GLYHTVVITSRGQIFGFGDNERAQLGHDTLRSCLEPTQI 473



 Score = 42.4 bits (98), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 60/129 (46%), Gaps = 4/129 (3%)

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
           Q+T G  +   L     V++CGS   G LG G    +    +      +  VV ++A  +
Sbjct: 115 QITTG-KYHTLLISNSSVYSCGSGLCGVLGQGSETTQCVAFTRIDSPPLPRVVHVSASFN 173

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           +   V  +G V++ G  S+ C GH +    + +PR +++   KGI   +V+AG    V L
Sbjct: 174 HAAFVMQSGEVFTCGDNSSSCCGHRDTTRPIFRPRLVESL--KGIPCKQVAAGLNFTVFL 231

Query: 339 DSSGYVSLC 347
              G+V  C
Sbjct: 232 TRQGHVYTC 240


>gi|297830122|ref|XP_002882943.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297328783|gb|EFH59202.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 488

 Score =  528 bits (1360), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 252/344 (73%), Positives = 283/344 (82%)

Query: 1   MADRYRLFSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLA 60
           MADR  L S E+LPSHLI E+LTSG+LSAVDL  LELTSK FGGSHG YP KFRSL D A
Sbjct: 1   MADRNWLISFEDLPSHLILEVLTSGKLSAVDLLSLELTSKVFGGSHGFYPLKFRSLADYA 60

Query: 61  ASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGR 120
           ASQLC++H +Y GM    Q EL   C GNWKR+L FLQSVE SSD+VETS G MQI TG+
Sbjct: 61  ASQLCSMHPVYVGMGLTTQKELFANCEGNWKRLLSFLQSVEQSSDMVETSQGKMQIATGK 120

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           YHTLLI+NS V+SCG SL GVL HGPETTQCV+FT I FP  A V QVSA++NH+AFVLQ
Sbjct: 121 YHTLLINNSKVYSCGVSLSGVLAHGPETTQCVAFTPIEFPFPAQVAQVSATQNHSAFVLQ 180

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           SG+V TCGDNSS CCGH DT+RPIFRP+LVE LKG PCKQV AGL+FT FL+  GH +TC
Sbjct: 181 SGEVLTCGDNSSHCCGHLDTSRPIFRPKLVEVLKGTPCKQVAAGLHFTVFLSREGHAYTC 240

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
           GSNTHGQLGHGDT+DRP PK +  L+ +G VVQIAAGPSY+LAVT +G VYSFGSGSNFC
Sbjct: 241 GSNTHGQLGHGDTMDRPAPKVVEFLKNIGPVVQIAAGPSYVLAVTQDGSVYSFGSGSNFC 300

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           LGHGEQ DELQPR IQ F+RKGIH++RVSAGDEH VALDS+G V
Sbjct: 301 LGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVALDSNGRV 344



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 89/206 (43%), Gaps = 5/206 (2%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +QI  G  + L ++ + SV+S GS     LGHG +  +        F     H+++VSA 
Sbjct: 272 VQIAAGPSYVLAVTQDGSVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKGIHILRVSAG 331

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           + HA  +  +G+V+T G       GH D N  I  P+++  LK     QV A    T  L
Sbjct: 332 DEHAVALDSNGRVYTWGKGYCGALGHGDENDKI-TPQVLVNLKNCLAVQVCARKRKTFVL 390

Query: 232 TIRGHVHTCGSNTHGQLGHGD--TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
              G ++  G    G LG  D    D+     +    +   V Q++ G  + + VT  G 
Sbjct: 391 VEGGLLYGFGWMGFGSLGFPDRGVSDKVLRPRVLECLKPHRVSQVSTGLYHTIVVTQGGR 450

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAI 315
           ++ FG      LGH      L+P  I
Sbjct: 451 IFGFGDNERAQLGHNSLRGCLEPTEI 476


>gi|18400769|ref|NP_566512.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|42572455|ref|NP_974323.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|7021728|gb|AAF35409.1| unknown protein [Arabidopsis thaliana]
 gi|15795108|dbj|BAB02372.1| unnamed protein product [Arabidopsis thaliana]
 gi|23297250|gb|AAN12924.1| unknown protein [Arabidopsis thaliana]
 gi|332642152|gb|AEE75673.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|332642153|gb|AEE75674.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
          Length = 488

 Score =  526 bits (1355), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 254/344 (73%), Positives = 282/344 (81%)

Query: 1   MADRYRLFSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLA 60
           MADR  L S E+LPSHLI E+LTSGRLSAVDL  LELTSK FGGSHG YP KFRSL D A
Sbjct: 1   MADRNCLISFEDLPSHLILEVLTSGRLSAVDLLSLELTSKVFGGSHGFYPLKFRSLADYA 60

Query: 61  ASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGR 120
           ASQLC++H +Y GM    Q EL   C GNWKR+  FLQSVE SSD+VETS G MQI TG+
Sbjct: 61  ASQLCSMHPVYVGMGLTTQKELFANCEGNWKRLFSFLQSVEQSSDMVETSQGKMQIATGK 120

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           YHTLLI+NS V+SCG SL GVL HG ETTQCV+FT I FP  A V QVSA++NH+AFVLQ
Sbjct: 121 YHTLLINNSKVYSCGVSLSGVLAHGSETTQCVAFTPIEFPFPAQVAQVSATQNHSAFVLQ 180

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           SGQV TCGDNSS CCGH DT+RPIFRP+LVEALKG PCKQV AGL+FT FL+  GH +TC
Sbjct: 181 SGQVLTCGDNSSHCCGHLDTSRPIFRPKLVEALKGTPCKQVAAGLHFTVFLSREGHAYTC 240

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
           GSNTHGQLGHGDTLDRP PK +  L+ +G VVQIAAGPSY+LAVT +G VYSFGSGSNFC
Sbjct: 241 GSNTHGQLGHGDTLDRPVPKVVEFLKTIGPVVQIAAGPSYVLAVTQDGSVYSFGSGSNFC 300

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           LGHGEQ DELQPR IQ F+RKGIH++RVSAGDEH VALDS+G V
Sbjct: 301 LGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVALDSNGRV 344



 Score = 61.2 bits (147), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 66/140 (47%), Gaps = 4/140 (2%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           ++++ G  H + L SN  V++ G   CG LGHG E  +      +N  +    VQV A +
Sbjct: 326 LRVSAGDEHAVALDSNGRVYTWGKGYCGALGHGDENDKITPQVLVNLNNCL-AVQVCARK 384

Query: 173 NHAAFVLQSGQVFTCG--DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
                +++ G ++  G     S     R  +  + RPR++E LK     QV+ GL  T  
Sbjct: 385 RKTFVLVEGGLLYGFGWMGFGSLGFPDRGVSDKVLRPRVLECLKPHRVSQVSTGLYHTIV 444

Query: 231 LTIRGHVHTCGSNTHGQLGH 250
           +T RG +   G N   QLGH
Sbjct: 445 VTQRGRIFGFGDNERAQLGH 464



 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 58/215 (26%), Positives = 92/215 (42%), Gaps = 5/215 (2%)

Query: 105 DIVETSAGNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP-SA 162
           + ++T    +QI  G  + L ++ + SV+S GS     LGHG +  +        F    
Sbjct: 263 EFLKTIGPVVQIAAGPSYVLAVTQDGSVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKG 322

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            H+++VSA + HA  +  +G+V+T G       GH D N  I  P+++  L      QV 
Sbjct: 323 IHILRVSAGDEHAVALDSNGRVYTWGKGYCGALGHGDENDKI-TPQVLVNLNNCLAVQVC 381

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGD--TLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           A    T  L   G ++  G    G LG  D    D+     +    +   V Q++ G  +
Sbjct: 382 ARKRKTFVLVEGGLLYGFGWMGFGSLGFPDRGVSDKVLRPRVLECLKPHRVSQVSTGLYH 441

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAI 315
            + VT  G ++ FG      LGH      L+P  I
Sbjct: 442 TIVVTQRGRIFGFGDNERAQLGHDSLRGCLEPTEI 476


>gi|14334416|gb|AAK59406.1| unknown protein [Arabidopsis thaliana]
          Length = 488

 Score =  525 bits (1353), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 253/344 (73%), Positives = 282/344 (81%)

Query: 1   MADRYRLFSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLA 60
           MADR  L S E+LPSHLI E+LTSGRLSAVDL  LELTSK FGGSHG YP KFRSL D A
Sbjct: 1   MADRNCLISFEDLPSHLILEVLTSGRLSAVDLLSLELTSKVFGGSHGFYPLKFRSLADYA 60

Query: 61  ASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGR 120
           ASQLC++H +Y GM    Q EL   C GNWKR+  FLQSVE SSD+VETS G MQI TG+
Sbjct: 61  ASQLCSMHPVYVGMGLTTQKELFANCEGNWKRLFSFLQSVEQSSDMVETSQGKMQIATGK 120

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           YHTLLI+NS V+SCG SL GVL HG ETTQCV+FT I FP  A V QVSA++NH+AFVLQ
Sbjct: 121 YHTLLINNSKVYSCGVSLSGVLAHGSETTQCVAFTPIEFPFPAQVAQVSATQNHSAFVLQ 180

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           SGQV TCGDNSS CCGH DT+RPIFRP+LVEALKG PCKQV AGL+FT FL+  GH +TC
Sbjct: 181 SGQVLTCGDNSSHCCGHLDTSRPIFRPKLVEALKGTPCKQVAAGLHFTVFLSREGHAYTC 240

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
           GSNTHGQLGHGDTLDRP PK +  L+ +G VVQIAAGPSY+LA+T +G VYSFGSGSNFC
Sbjct: 241 GSNTHGQLGHGDTLDRPVPKVVEFLKTIGPVVQIAAGPSYVLALTQDGSVYSFGSGSNFC 300

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           LGHGEQ DELQPR IQ F+RKGIH++RVSAGDEH VALDS+G V
Sbjct: 301 LGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVALDSNGRV 344



 Score = 61.2 bits (147), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 66/140 (47%), Gaps = 4/140 (2%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           ++++ G  H + L SN  V++ G   CG LGHG E  +      +N  +    VQV A +
Sbjct: 326 LRVSAGDEHAVALDSNGRVYTWGKGYCGALGHGDENDKITPQVLVNLNNCL-AVQVCARK 384

Query: 173 NHAAFVLQSGQVFTCG--DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
                +++ G ++  G     S     R  +  + RPR++E LK     QV+ GL  T  
Sbjct: 385 RKTFVLVEGGLLYGFGWMGFGSLGFPDRGVSDKVLRPRVLECLKPHRVSQVSTGLYHTIV 444

Query: 231 LTIRGHVHTCGSNTHGQLGH 250
           +T RG +   G N   QLGH
Sbjct: 445 VTQRGRIFGFGDNERAQLGH 464



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 96/227 (42%), Gaps = 13/227 (5%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQC 151
           +V+ FL+++     +V+ +AG        Y   L  + SV+S GS     LGHG +  + 
Sbjct: 260 KVVEFLKTI---GPVVQIAAGP------SYVLALTQDGSVYSFGSGSNFCLGHGEQQDEL 310

Query: 152 VSFTRINFP-SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV 210
                  F     H+++VSA + HA  +  +G+V+T G       GH D N  I  P+++
Sbjct: 311 QPRVIQAFKRKGIHILRVSAGDEHAVALDSNGRVYTWGKGYCGALGHGDENDKI-TPQVL 369

Query: 211 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD--TLDRPTPKSIAPLEEV 268
             L      QV A    T  L   G ++  G    G LG  D    D+     +    + 
Sbjct: 370 VNLNNCLAVQVCARKRKTFVLVEGGLLYGFGWMGFGSLGFPDRGVSDKVLRPRVLECLKP 429

Query: 269 GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAI 315
             V Q++ G  + + VT  G ++ FG      LGH      L+P  I
Sbjct: 430 HRVSQVSTGLYHTIVVTQRGRIFGFGDNERAQLGHDSLRGCLEPTEI 476


>gi|449446943|ref|XP_004141229.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Cucumis
           sativus]
          Length = 491

 Score =  510 bits (1314), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 251/344 (72%), Positives = 282/344 (81%)

Query: 1   MADRYRLFSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLA 60
           MA      +  +LPSHLI E+LTSGRL+A DL  LELT K FGGSH LYP KFRSLVD A
Sbjct: 1   MAKWLHSTTFVDLPSHLILEVLTSGRLNAHDLVCLELTCKLFGGSHELYPLKFRSLVDFA 60

Query: 61  ASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGR 120
           A QLC  HS Y+GM  + Q +L +RC G WKRV RFLQ VE SS+IVETS GNMQI TGR
Sbjct: 61  AFQLCISHSTYSGMGEDSQRQLFDRCQGKWKRVFRFLQLVEKSSNIVETSEGNMQIATGR 120

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           YHTLLISN SV+SCGSSLCGVLGHG ETTQCV+FTRINFP + +V QVSAS NHAAFV Q
Sbjct: 121 YHTLLISNGSVYSCGSSLCGVLGHGSETTQCVTFTRINFPPSIYVEQVSASHNHAAFVTQ 180

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           SGQVFTCGDNSSFCCGHRDT+  IFRPRLVEAL G+PCKQV+ G NF+ FLT +GHV+TC
Sbjct: 181 SGQVFTCGDNSSFCCGHRDTSCRIFRPRLVEALNGIPCKQVSVGHNFSVFLTRQGHVYTC 240

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
           G+NT+GQLGHG+TL+ PTPK +  L E+GSV+QIAAGPSY+LAV  +G VYSFGSGSNFC
Sbjct: 241 GTNTYGQLGHGNTLEGPTPKIVQRLVEIGSVIQIAAGPSYVLAVVNDGRVYSFGSGSNFC 300

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           LGHGEQH+E QPR +QTFR K IHVV VSAGDEH VALDS+G V
Sbjct: 301 LGHGEQHNEFQPRVLQTFRLKNIHVVSVSAGDEHAVALDSNGLV 344



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 63/259 (24%), Positives = 99/259 (38%), Gaps = 60/259 (23%)

Query: 115 QITTG-RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q++ G  +   L     V++CG++  G LGHG                   V+Q++A  +
Sbjct: 220 QVSVGHNFSVFLTRQGHVYTCGTNTYGQLGHGNTLEGPTPKIVQRLVEIGSVIQIAAGPS 279

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA--LKGVPCKQVTAGLNFTGFL 231
           +   V+  G+V++ G  S+FC GH + +   F+PR+++   LK +    V+AG      L
Sbjct: 280 YVLAVVNDGRVYSFGSGSNFCLGHGEQHNE-FQPRVLQTFRLKNIHVVSVSAGDEHAVAL 338

Query: 232 TIRGHVHTCGSNTHGQLGHGD----TLDRPT----------------------------- 258
              G V+T G    G LGHGD    T+ +P                              
Sbjct: 339 DSNGLVYTWGKGYCGALGHGDEIDKTIPQPLNSLKNHLAVQVCARKRKTFVLVDTGIVYG 398

Query: 259 ----------------------PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
                                 P+S+  L  V  V QI+ G  + + VT  G ++ FG  
Sbjct: 399 FGWMGFGSLGFPDRGVSDKVLRPRSLDSLR-VHRVSQISTGLYHTVVVTEKGKIFGFGDN 457

Query: 297 SNFCLGHGEQHDELQPRAI 315
               LGH      L+P  I
Sbjct: 458 ERAQLGHESLRGCLEPTEI 476



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 4/140 (2%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + ++ G  H + L SN  V++ G   CG LGHG E  + +    +N       VQV A +
Sbjct: 326 VSVSAGDEHAVALDSNGLVYTWGKGYCGALGHGDEIDKTIP-QPLNSLKNHLAVQVCARK 384

Query: 173 NHAAFVLQSGQVFTCG--DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
                ++ +G V+  G     S     R  +  + RPR +++L+     Q++ GL  T  
Sbjct: 385 RKTFVLVDTGIVYGFGWMGFGSLGFPDRGVSDKVLRPRSLDSLRVHRVSQISTGLYHTVV 444

Query: 231 LTIRGHVHTCGSNTHGQLGH 250
           +T +G +   G N   QLGH
Sbjct: 445 VTEKGKIFGFGDNERAQLGH 464


>gi|357122920|ref|XP_003563161.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Brachypodium
           distachyon]
          Length = 485

 Score =  442 bits (1138), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 218/339 (64%), Positives = 258/339 (76%), Gaps = 11/339 (3%)

Query: 6   RLFSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLC 65
           R FS+EELP HLI E+LTSGRL+A DLA LE T +             R L + AAS+LC
Sbjct: 8   RAFSMEELPGHLIGEVLTSGRLAAGDLARLEATCRAL-----------RPLAEHAASRLC 56

Query: 66  ALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLL 125
              + +A M    + ELL RC G+WK+VLRFLQSVE SSD VETS+GNMQ+ TGRYHTLL
Sbjct: 57  EARTAFAVMGPAARGELLARCGGSWKKVLRFLQSVEQSSDTVETSSGNMQVATGRYHTLL 116

Query: 126 ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVF 185
           + +SSV+SCGSSLCGVLGHGP+TTQCV+F+R++FP+ + VV +SA  NHAAFV ++GQVF
Sbjct: 117 VHDSSVYSCGSSLCGVLGHGPDTTQCVAFSRVSFPALSRVVNISAFHNHAAFVTETGQVF 176

Query: 186 TCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH 245
           TCGDNSS CCGH D  R IFRP  +EALKG  CKQV  GL+FT  LT  G V+TCGSNTH
Sbjct: 177 TCGDNSSLCCGHGDVGRTIFRPTQIEALKGTFCKQVATGLSFTVILTREGQVYTCGSNTH 236

Query: 246 GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
           GQLGHGDT+DR  PK I   E    VVQ+AAG SY  AVT +G V+SFGS +NFCLGHG+
Sbjct: 237 GQLGHGDTIDRAAPKIIELFEGSSPVVQVAAGASYTFAVTDDGTVHSFGSCTNFCLGHGD 296

Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           QH+EL PRAIQ+F+R+ IHVVRVSAGDEH VALD+ GYV
Sbjct: 297 QHNELLPRAIQSFKRRNIHVVRVSAGDEHAVALDALGYV 335



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/273 (25%), Positives = 113/273 (41%), Gaps = 59/273 (21%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+ TG   T++++    V++CGS+  G LGHG    +        F  ++ VVQV+A  +
Sbjct: 211 QVATGLSFTVILTREGQVYTCGSNTHGQLGHGDTIDRAAPKIIELFEGSSPVVQVAAGAS 270

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK--GVPCKQVTAGLNFTGFL 231
           +   V   G V + G  ++FC GH D +  +  PR +++ K   +   +V+AG      L
Sbjct: 271 YTFAVTDDGTVHSFGSCTNFCLGHGDQHNELL-PRAIQSFKRRNIHVVRVSAGDEHAVAL 329

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE------------------EVGSVV- 272
              G+V+T G    G LGHGD  D+ +P+ I  L+                  + GSVV 
Sbjct: 330 DALGYVYTWGRGYCGALGHGDENDKTSPELIGSLKGQVAVQVCARKRKTFVLTDEGSVVA 389

Query: 273 -----------------------------------QIAAGPSYMLAVTGNGVVYSFGSGS 297
                                              QI+ G  + +AVT  G+V+ FG   
Sbjct: 390 FGWMGFGSLGFPDRESSDKVMKPCVLDSLRGHYVSQISTGLYHTVAVTNKGIVFGFGDNE 449

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
              LG       L+P  I  F +  +  + ++A
Sbjct: 450 RAQLGQEYIRGCLKPTEIM-FHKSSMEDIAIAA 481



 Score = 44.7 bits (104), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 63/140 (45%), Gaps = 4/140 (2%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           ++++ G  H + L +   V++ G   CG LGHG E  +  S   I        VQV A +
Sbjct: 317 VRVSAGDEHAVALDALGYVYTWGRGYCGALGHGDENDK-TSPELIGSLKGQVAVQVCARK 375

Query: 173 NHAAFVLQSGQVFTCG--DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
                +   G V   G     S     R+++  + +P ++++L+G    Q++ GL  T  
Sbjct: 376 RKTFVLTDEGSVVAFGWMGFGSLGFPDRESSDKVMKPCVLDSLRGHYVSQISTGLYHTVA 435

Query: 231 LTIRGHVHTCGSNTHGQLGH 250
           +T +G V   G N   QLG 
Sbjct: 436 VTNKGIVFGFGDNERAQLGQ 455


>gi|293332153|ref|NP_001168691.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
 gi|223950263|gb|ACN29215.1| unknown [Zea mays]
 gi|414884497|tpg|DAA60511.1| TPA: putative regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 483

 Score =  440 bits (1131), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 221/339 (65%), Positives = 260/339 (76%), Gaps = 11/339 (3%)

Query: 6   RLFSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLC 65
           R FSIEELP HLI E+LTSG L+A DLA LE T +             R L + AAS+LC
Sbjct: 8   RAFSIEELPGHLIGEVLTSGGLAAADLARLEATCRAL-----------RPLAEYAASKLC 56

Query: 66  ALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLL 125
           A  + +A M    + ELL RC G+WKRVLRFLQSVE SS  VETS+G+MQ+ TGRYHTLL
Sbjct: 57  AARAAFAAMGPAARGELLERCGGSWKRVLRFLQSVEQSSGTVETSSGSMQVATGRYHTLL 116

Query: 126 ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVF 185
           + +SSV+SCGSSLCGVLGHGP+TTQC +F+R++FPS + V+ +SAS NHAAFV +SG+VF
Sbjct: 117 VHDSSVYSCGSSLCGVLGHGPDTTQCAAFSRVSFPSLSRVINISASHNHAAFVTESGEVF 176

Query: 186 TCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH 245
           TCGDNSS CCGH +  R IFRP  VEALKG+PCKQV  GL+FT  LT  G V+TCGSNTH
Sbjct: 177 TCGDNSSLCCGHGEVGRTIFRPMQVEALKGIPCKQVATGLSFTVILTRDGQVYTCGSNTH 236

Query: 246 GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
           GQLGHGDT+DR TPK I   E    VVQIAAG SY  AVT +G V+SFGS +NFCLGHG+
Sbjct: 237 GQLGHGDTIDRATPKLIELFEGPTQVVQIAAGASYTFAVTDDGTVHSFGSCTNFCLGHGD 296

Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           QHDEL PRAIQ+F+R+ IHVVRVSAGDEH VALD+ G+V
Sbjct: 297 QHDELLPRAIQSFKRRNIHVVRVSAGDEHAVALDALGHV 335



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 95/346 (27%), Positives = 146/346 (42%), Gaps = 41/346 (11%)

Query: 6   RLFSIEELPSHLIF-----EILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLA 60
           R+ +I    +H  F     E+ T G  S++   H E+    F       P +  +L  + 
Sbjct: 155 RVINISASHNHAAFVTESGEVFTCGDNSSLCCGHGEVGRTIF------RPMQVEALKGIP 208

Query: 61  ASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSS----DIVETSAGNMQI 116
             Q+    S    ++R+ Q+     C  N    L    +++ ++    ++ E     +QI
Sbjct: 209 CKQVATGLSFTVILTRDGQV---YTCGSNTHGQLGHGDTIDRATPKLIELFEGPTQVVQI 265

Query: 117 TTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCV-----SFTRINFPSAAHVVQVSA 170
             G  +T  +++  +V S GS     LGHG +  + +     SF R N     HVV+VSA
Sbjct: 266 AAGASYTFAVTDDGTVHSFGSCTNFCLGHGDQHDELLPRAIQSFKRRNI----HVVRVSA 321

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            + HA  +   G V+T G       GH D N     P L+ +LKG    QV A    T  
Sbjct: 322 GDEHAVALDALGHVYTWGRGYCGALGHGDENDKT-SPELIGSLKGQVAVQVCARKRKTFV 380

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPT------PKSIAPLEEVGSVVQIAAGPSYMLAV 284
           LT  G V   G    G LG    LDR T      P+ +  L++   V QI+ G  + +AV
Sbjct: 381 LTDEGSVVAFGWMGFGSLGF---LDRGTSDKVMRPRVLESLQD-HYVSQISTGLYHTVAV 436

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           T  G+V+ FG      LG       L+P  I    +K I  + ++A
Sbjct: 437 TNKGIVFGFGDNERAQLGQEYIRGCLKPTEI--MFQKSIEDIPIAA 480


>gi|218199547|gb|EEC81974.1| hypothetical protein OsI_25886 [Oryza sativa Indica Group]
          Length = 907

 Score =  437 bits (1124), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 217/339 (64%), Positives = 259/339 (76%), Gaps = 11/339 (3%)

Query: 6   RLFSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLC 65
           R FS+EELP HLI E+LTSGRL+A DLA LE T +             R L + AAS+LC
Sbjct: 9   RAFSMEELPGHLIGEVLTSGRLAAGDLARLEATCRAL-----------RPLAEHAASRLC 57

Query: 66  ALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLL 125
           A  + +A M    + ELL RC G+WK+VLRFLQSVE SS  V TS+GNMQ+ TGRYHTLL
Sbjct: 58  AARAAFAAMGPAARGELLERCGGSWKKVLRFLQSVEQSSGTVHTSSGNMQVATGRYHTLL 117

Query: 126 ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVF 185
           + +SSV+SCGSSLCGVLGHGP+TTQC +F+R+ FPS + VV +SAS NHAAFV + G+VF
Sbjct: 118 VHDSSVYSCGSSLCGVLGHGPDTTQCAAFSRVPFPSLSRVVNISASHNHAAFVTELGEVF 177

Query: 186 TCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH 245
           TCGDNSS CCGH +  R IFRP  ++ALKG+ CKQV  GL+FT  LT  G V+TCGSNTH
Sbjct: 178 TCGDNSSLCCGHGEVGRTIFRPTEIKALKGISCKQVATGLSFTVILTTDGQVYTCGSNTH 237

Query: 246 GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
           GQLGHGDT+DR TPK +   E +  VVQ+AAG SY  AVT +G VYSFGS +NFCLGHG+
Sbjct: 238 GQLGHGDTIDRATPKIVELFEGLAPVVQVAAGASYTFAVTDDGTVYSFGSCTNFCLGHGD 297

Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           QHDEL+PRAIQ+F+R+ IHVVRVSAGDEH VALD+ GYV
Sbjct: 298 QHDELRPRAIQSFKRRNIHVVRVSAGDEHAVALDALGYV 336



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 69/258 (26%), Positives = 106/258 (41%), Gaps = 58/258 (22%)

Query: 115 QITTG-RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+ TG  +  +L ++  V++CGS+  G LGHG    +        F   A VVQV+A  +
Sbjct: 212 QVATGLSFTVILTTDGQVYTCGSNTHGQLGHGDTIDRATPKIVELFEGLAPVVQVAAGAS 271

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK--GVPCKQVTAGLNFTGFL 231
           +   V   G V++ G  ++FC GH D +  + RPR +++ K   +   +V+AG      L
Sbjct: 272 YTFAVTDDGTVYSFGSCTNFCLGHGDQHDEL-RPRAIQSFKRRNIHVVRVSAGDEHAVAL 330

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP------------------LEEVGSVV- 272
              G+V+T G    G LGHGD  D+ +P+ I+                   L + GSV  
Sbjct: 331 DALGYVYTWGRGYCGALGHGDENDKTSPELISSLKSQVAVQVCARKRKTFVLTDEGSVFA 390

Query: 273 -----------------------------------QIAAGPSYMLAVTGNGVVYSFGSGS 297
                                              QI+ G  + +AVT  G+V+ FG   
Sbjct: 391 FGWMGFGSLGFPDRGSSDKVMRPRVLDSLRDHYVSQISTGLYHTVAVTNRGIVFGFGDNE 450

Query: 298 NFCLGHGEQHDELQPRAI 315
              LG       L+P  I
Sbjct: 451 RAQLGQEYIRGCLKPTEI 468



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 65/140 (46%), Gaps = 4/140 (2%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           ++++ G  H + L +   V++ G   CG LGHG E  +  S   I+   +   VQV A +
Sbjct: 318 VRVSAGDEHAVALDALGYVYTWGRGYCGALGHGDENDK-TSPELISSLKSQVAVQVCARK 376

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRD--TNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
                +   G VF  G       G  D  ++  + RPR++++L+     Q++ GL  T  
Sbjct: 377 RKTFVLTDEGSVFAFGWMGFGSLGFPDRGSSDKVMRPRVLDSLRDHYVSQISTGLYHTVA 436

Query: 231 LTIRGHVHTCGSNTHGQLGH 250
           +T RG V   G N   QLG 
Sbjct: 437 VTNRGIVFGFGDNERAQLGQ 456


>gi|115471953|ref|NP_001059575.1| Os07g0459400 [Oryza sativa Japonica Group]
 gi|28564665|dbj|BAC57847.1| putative UVB-resistance protein UVR8 [Oryza sativa Japonica Group]
 gi|113611111|dbj|BAF21489.1| Os07g0459400 [Oryza sativa Japonica Group]
 gi|215678781|dbj|BAG95218.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 484

 Score =  436 bits (1122), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 217/339 (64%), Positives = 259/339 (76%), Gaps = 11/339 (3%)

Query: 6   RLFSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLC 65
           R FS+EELP HLI E+LTSGRL+A DLA LE T +             R L + AAS+LC
Sbjct: 9   RAFSMEELPGHLIGEVLTSGRLAAGDLARLEATCRAL-----------RPLAEHAASRLC 57

Query: 66  ALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLL 125
           A  + +A M    + ELL RC G+WK+VLRFLQSVE SS  V TS+GNMQ+ TGRYHTLL
Sbjct: 58  AARAAFAAMGPAARGELLERCGGSWKKVLRFLQSVEQSSGTVHTSSGNMQVATGRYHTLL 117

Query: 126 ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVF 185
           + +SSV+SCGSSLCGVLGHGP+TTQC +F+R+ FPS + VV +SAS NHAAFV + G+VF
Sbjct: 118 VHDSSVYSCGSSLCGVLGHGPDTTQCAAFSRVPFPSLSRVVNISASHNHAAFVTELGEVF 177

Query: 186 TCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH 245
           TCGDNSS CCGH +  R IFRP  ++ALKG+ CKQV  GL+FT  LT  G V+TCGSNTH
Sbjct: 178 TCGDNSSLCCGHGEVGRTIFRPTEIKALKGISCKQVATGLSFTVILTTDGQVYTCGSNTH 237

Query: 246 GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
           GQLGHGDT+DR TPK +   E +  VVQ+AAG SY  AVT +G VYSFGS +NFCLGHG+
Sbjct: 238 GQLGHGDTIDRATPKIVELFEGLAPVVQVAAGASYTFAVTDDGTVYSFGSCTNFCLGHGD 297

Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           QHDEL+PRAIQ+F+R+ IHVVRVSAGDEH VALD+ GYV
Sbjct: 298 QHDELRPRAIQSFKRRNIHVVRVSAGDEHAVALDALGYV 336



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 69/258 (26%), Positives = 106/258 (41%), Gaps = 58/258 (22%)

Query: 115 QITTG-RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+ TG  +  +L ++  V++CGS+  G LGHG    +        F   A VVQV+A  +
Sbjct: 212 QVATGLSFTVILTTDGQVYTCGSNTHGQLGHGDTIDRATPKIVELFEGLAPVVQVAAGAS 271

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK--GVPCKQVTAGLNFTGFL 231
           +   V   G V++ G  ++FC GH D +  + RPR +++ K   +   +V+AG      L
Sbjct: 272 YTFAVTDDGTVYSFGSCTNFCLGHGDQHDEL-RPRAIQSFKRRNIHVVRVSAGDEHAVAL 330

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP------------------LEEVGSVV- 272
              G+V+T G    G LGHGD  D+ +P+ I+                   L + GSV  
Sbjct: 331 DALGYVYTWGRGYCGALGHGDENDKTSPELISSLKSQVAVQVCARKRKTFVLTDEGSVFA 390

Query: 273 -----------------------------------QIAAGPSYMLAVTGNGVVYSFGSGS 297
                                              QI+ G  + +AVT  G+V+ FG   
Sbjct: 391 FGWMGFGSLGFPDRGSSDKVMRPRVLDSLRDHYVSQISTGLYHTVAVTNRGIVFGFGDNE 450

Query: 298 NFCLGHGEQHDELQPRAI 315
              LG       L+P  I
Sbjct: 451 RAQLGQEYIRGCLKPTEI 468



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 65/140 (46%), Gaps = 4/140 (2%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           ++++ G  H + L +   V++ G   CG LGHG E  +  S   I+   +   VQV A +
Sbjct: 318 VRVSAGDEHAVALDALGYVYTWGRGYCGALGHGDENDK-TSPELISSLKSQVAVQVCARK 376

Query: 173 NHAAFVLQSGQVFTCG--DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
                +   G VF  G     S     R ++  + RPR++++L+     Q++ GL  T  
Sbjct: 377 RKTFVLTDEGSVFAFGWMGFGSLGFPDRGSSDKVMRPRVLDSLRDHYVSQISTGLYHTVA 436

Query: 231 LTIRGHVHTCGSNTHGQLGH 250
           +T RG V   G N   QLG 
Sbjct: 437 VTNRGIVFGFGDNERAQLGQ 456


>gi|414589113|tpg|DAA39684.1| TPA: putative regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 371

 Score =  432 bits (1112), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 218/339 (64%), Positives = 258/339 (76%), Gaps = 11/339 (3%)

Query: 6   RLFSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLC 65
           R F IEELP HLI E+LTSG L+A DLA LE T +             R L + AAS+LC
Sbjct: 8   RAFPIEELPGHLIGEVLTSGGLAAADLARLEATCRAL-----------RPLAEYAASKLC 56

Query: 66  ALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLL 125
           A  + +A M    +  LL RC G+WK+VLRFLQSVE SS  VET++G+MQ+ TGRYHTLL
Sbjct: 57  AARAAFAAMGPAARGGLLERCGGSWKKVLRFLQSVEQSSGTVETTSGSMQVATGRYHTLL 116

Query: 126 ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVF 185
           + +SSV+SCGSSLCGVLGHGP+TTQC +F+R++FPS + V+ +SAS NHAAFVL+SG+VF
Sbjct: 117 VHDSSVYSCGSSLCGVLGHGPDTTQCAAFSRVSFPSLSCVINISASHNHAAFVLESGEVF 176

Query: 186 TCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH 245
           TCGDNSS CCGH +  R IFRP  VEALKG+PCKQV  GL+FT  LT  G V+TCGSNTH
Sbjct: 177 TCGDNSSLCCGHGEVGRTIFRPMQVEALKGIPCKQVATGLSFTVILTRDGQVYTCGSNTH 236

Query: 246 GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
           GQLGHGDT+DR TPK I   E    VVQIAAG SY  AVT +G V+SFGS +NFCLGHG+
Sbjct: 237 GQLGHGDTIDRATPKLIELFEGSTPVVQIAAGASYTFAVTDDGTVHSFGSCTNFCLGHGD 296

Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           QHDEL PRAIQ+F+ + IHVVRVSAGDEH VALD+ GYV
Sbjct: 297 QHDELLPRAIQSFKWRNIHVVRVSAGDEHAVALDALGYV 335


>gi|222636984|gb|EEE67116.1| hypothetical protein OsJ_24138 [Oryza sativa Japonica Group]
          Length = 484

 Score =  432 bits (1112), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 216/339 (63%), Positives = 258/339 (76%), Gaps = 11/339 (3%)

Query: 6   RLFSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLC 65
           R FS+EELP HLI E+LTSGRL+A DLA LE T +             R L + AAS+L 
Sbjct: 9   RAFSMEELPGHLIGEVLTSGRLAAGDLARLEATCRAL-----------RPLAEHAASRLW 57

Query: 66  ALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLL 125
           A  + +A M    + ELL RC G+WK+VLRFLQSVE SS  V TS+GNMQ+ TGRYHTLL
Sbjct: 58  AARAAFAAMGPAARGELLERCGGSWKKVLRFLQSVEQSSGTVHTSSGNMQVATGRYHTLL 117

Query: 126 ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVF 185
           + +SSV+SCGSSLCGVLGHGP+TTQC +F+R+ FPS + VV +SAS NHAAFV + G+VF
Sbjct: 118 VHDSSVYSCGSSLCGVLGHGPDTTQCAAFSRVPFPSLSRVVNISASHNHAAFVTELGEVF 177

Query: 186 TCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH 245
           TCGDNSS CCGH +  R IFRP  ++ALKG+ CKQV  GL+FT  LT  G V+TCGSNTH
Sbjct: 178 TCGDNSSLCCGHGEVGRTIFRPTEIKALKGISCKQVATGLSFTVILTTDGQVYTCGSNTH 237

Query: 246 GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
           GQLGHGDT+DR TPK +   E +  VVQ+AAG SY  AVT +G VYSFGS +NFCLGHG+
Sbjct: 238 GQLGHGDTIDRATPKIVELFEGLAPVVQVAAGASYTFAVTDDGTVYSFGSCTNFCLGHGD 297

Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           QHDEL+PRAIQ+F+R+ IHVVRVSAGDEH VALD+ GYV
Sbjct: 298 QHDELRPRAIQSFKRRNIHVVRVSAGDEHAVALDALGYV 336



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 69/258 (26%), Positives = 106/258 (41%), Gaps = 58/258 (22%)

Query: 115 QITTG-RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+ TG  +  +L ++  V++CGS+  G LGHG    +        F   A VVQV+A  +
Sbjct: 212 QVATGLSFTVILTTDGQVYTCGSNTHGQLGHGDTIDRATPKIVELFEGLAPVVQVAAGAS 271

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK--GVPCKQVTAGLNFTGFL 231
           +   V   G V++ G  ++FC GH D +  + RPR +++ K   +   +V+AG      L
Sbjct: 272 YTFAVTDDGTVYSFGSCTNFCLGHGDQHDEL-RPRAIQSFKRRNIHVVRVSAGDEHAVAL 330

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP------------------LEEVGSVV- 272
              G+V+T G    G LGHGD  D+ +P+ I+                   L + GSV  
Sbjct: 331 DALGYVYTWGRGYCGALGHGDENDKTSPELISSLKSQVAVQVCARKRKTFVLTDEGSVFA 390

Query: 273 -----------------------------------QIAAGPSYMLAVTGNGVVYSFGSGS 297
                                              QI+ G  + +AVT  G+V+ FG   
Sbjct: 391 FGWMGFGSLGFPDRGSSDKVMRPRVLDSLRDHYVSQISTGLYHTVAVTNRGIVFGFGDNE 450

Query: 298 NFCLGHGEQHDELQPRAI 315
              LG       L+P  I
Sbjct: 451 RAQLGQEYIRGCLKPTEI 468



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 65/140 (46%), Gaps = 4/140 (2%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           ++++ G  H + L +   V++ G   CG LGHG E  +  S   I+   +   VQV A +
Sbjct: 318 VRVSAGDEHAVALDALGYVYTWGRGYCGALGHGDENDK-TSPELISSLKSQVAVQVCARK 376

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCG--HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
                +   G VF  G       G   R ++  + RPR++++L+     Q++ GL  T  
Sbjct: 377 RKTFVLTDEGSVFAFGWMGFGSLGFPDRGSSDKVMRPRVLDSLRDHYVSQISTGLYHTVA 436

Query: 231 LTIRGHVHTCGSNTHGQLGH 250
           +T RG V   G N   QLG 
Sbjct: 437 VTNRGIVFGFGDNERAQLGQ 456


>gi|168058994|ref|XP_001781490.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162667031|gb|EDQ53670.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 489

 Score =  259 bits (661), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 141/338 (41%), Positives = 209/338 (61%), Gaps = 4/338 (1%)

Query: 10  IEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCALHS 69
           IE LP  ++ +IL +GRL  VDLA LE +S  F  + G+ P +F+S+ +LAA   C +H 
Sbjct: 5   IEMLPPCILQDILYNGRLGPVDLASLEASSYMFRAASGIAPYRFKSIAELAAHHSCQMHP 64

Query: 70  IYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAG-NMQITTGRYHTLLIS- 127
           ++       ++ELL RC GNWK VL FL S++ SS +    +G ++ +  GRYHTLL+  
Sbjct: 65  VFENFPPRARLELLARCEGNWKLVLHFLNSLQRSSGLSVGGSGRDVLVAAGRYHTLLVDR 124

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA-HVVQVSASENHAAFVLQSGQVFT 186
              +++CG+    VLG  P  +       I  P+AA  +VQ+SA+ NHAAFV +SGQV+T
Sbjct: 125 KGELYACGTG-GSVLGQNPAVSNLQRPASIPLPAAATRIVQISANFNHAAFVTESGQVYT 183

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            GDN S CCG  ++ +PI +P LV  L+  PC+QV+ G  +T  LT  G + + G N+HG
Sbjct: 184 FGDNVSCCCGVGESGQPISKPTLVTTLERNPCQQVSTGQGYTVALTRNGELFSWGCNSHG 243

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           QLG G+T ++  P+ I    E   V Q++AG  + LAVT +G ++S+G GSN+CLGH + 
Sbjct: 244 QLGQGNTQEQFRPRQIEEFNESNPVAQVSAGICHTLAVTKSGQLFSWGYGSNYCLGHDDF 303

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             EL+P+ ++      + ++  +AGDEH  A+DS GYV
Sbjct: 304 LTELRPKRVEHGGFDDLFIISAAAGDEHSAAIDSLGYV 341



 Score = 45.1 bits (105), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 59/204 (28%), Positives = 84/204 (41%), Gaps = 28/204 (13%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVV 166
           Q++ G  HTL ++ S  +FS G      LGH        P+  +   F  +   SAA   
Sbjct: 270 QVSAGICHTLAVTKSGQLFSWGYGSNYCLGHDDFLTELRPKRVEHGGFDDLFIISAA--- 326

Query: 167 QVSASENHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTA 223
              A + H+A +   G V+T G       GH    D   P+    +V ALK     QV A
Sbjct: 327 ---AGDEHSAAIDSLGYVYTWGKGYCGALGHGAGTDQRTPL----VVAALKSTRAVQVVA 379

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLG-----HGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
               T  L   G VH+ G   +  LG       DT+   +P+S+        V  IAAG 
Sbjct: 380 RRRKTFVLGDNGTVHSFGWMAYHSLGVQGKSASDTV--VSPQSLDLALHGHKVSTIAAGM 437

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLG 302
            + L +T  G ++ FG   +  LG
Sbjct: 438 YHTLVITRKGAIFGFGDNDSSQLG 461


>gi|147858211|emb|CAN79677.1| hypothetical protein VITISV_011751 [Vitis vinifera]
          Length = 454

 Score =  149 bits (375), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 75/125 (60%), Positives = 88/125 (70%)

Query: 147 ETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR 206
           ET  C++F++INFPS A V QVS S NHAAFV+QSG+  TCG+ SSF CGH DT  P+FR
Sbjct: 200 ETKPCMAFSKINFPSLAPVTQVSTSHNHAAFVMQSGEASTCGNYSSFRCGHGDTVCPMFR 259

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
              VEALK VP KQV A  +F  FL I+GHV  CG N HGQLG+GDT+DR T K +  LE
Sbjct: 260 LDFVEALKEVPYKQVVARFSFAAFLPIKGHVFACGMNIHGQLGYGDTVDRRTLKIVELLE 319

Query: 267 EVGSV 271
            V  V
Sbjct: 320 GVDPV 324


>gi|297814848|ref|XP_002875307.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297321145|gb|EFH51566.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 533

 Score =  141 bits (356), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 114/347 (32%), Positives = 162/347 (46%), Gaps = 22/347 (6%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCAL 67
           F +   PS ++  +LT  RL   DLA+LE T   F       P    SL +LAA  +C  
Sbjct: 47  FPLAANPS-IVLHVLTECRLDPRDLANLEATCSFFSQPANFAPDINLSLSELAALDMCNK 105

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLI- 126
             I+  M+   + E+  RC G+WK VLRFL + E      ++     Q   G  H++ + 
Sbjct: 106 RVIFKPMNEEERQEMKRRCGGSWKLVLRFLLAGEACCRREKS-----QAVAGPGHSIAVT 160

Query: 127 SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 186
           S   V++ G +  G LGHG  T +      +       ++Q +A       +   G+V+ 
Sbjct: 161 SKGEVYTFGYNNSGQLGHG-HTEEQARIQPVRSLQGIRIIQAAAGAARTMLISDDGKVYA 219

Query: 187 CGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
           CG  S      G + T +P+  P+LV +LK +   Q   G  FT  L+  G V+T     
Sbjct: 220 CGKESFGEAEYGGQGT-QPVTTPQLVTSLKNIFVVQAAIGNYFTAVLSREGKVYTFSWGN 278

Query: 245 HGQLGH----GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT--GNGV-VYSFGSGS 297
            G+LGH     D   RP    + PLE V  VVQIAAG  Y+LA+    NG+ VYS G G 
Sbjct: 279 DGRLGHQTEAADVEPRPL---LGPLENV-PVVQIAAGYCYLLALACQPNGMSVYSVGCGL 334

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              LGHG + DE  PR I+ F+   +    V+AG  H   +   G V
Sbjct: 335 GGKLGHGSRTDEKYPRVIEQFKILNLQPRVVAAGAWHAAVVGQDGRV 381



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 70/252 (27%), Positives = 100/252 (39%), Gaps = 29/252 (11%)

Query: 114 MQITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
           +Q   G Y T ++S       FS G+   G LGH  E         +       VVQ++A
Sbjct: 253 VQAAIGNYFTAVLSREGKVYTFSWGND--GRLGHQTEAADVEPRPLLGPLENVPVVQIAA 310

Query: 171 SENHA-AFVLQSG--QVFT--CGDNSSFCCGHRDTNRPIFRPRLVEALK--GVPCKQVTA 223
              +  A   Q     V++  CG       G R   +    PR++E  K   +  + V A
Sbjct: 311 GYCYLLALACQPNGMSVYSVGCGLGGKLGHGSRTDEK---YPRVIEQFKILNLQPRVVAA 367

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G      +   G V T G   +G LGHG+      PK +  L  V   V +A G      
Sbjct: 368 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVEGLNHV-KAVHVATGDYTTFV 426

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDE--------LQPRAIQTFRRKGIHVVRVSA----- 330
           V+ +G VYSFG G +  LGH    DE        L P  + + ++    VV++S      
Sbjct: 427 VSDDGDVYSFGCGESASLGHHPSFDEQGNRHANVLSPAVVTSLKQANERVVQISLTNSIY 486

Query: 331 GDEHVVALDSSG 342
            + H  AL  SG
Sbjct: 487 WNAHTFALTESG 498



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 90/212 (42%), Gaps = 28/212 (13%)

Query: 114 MQITTGRYHTLLIS----NSSVFSCGSSLCGVLGHGPETTQ-----CVSFTRINFPSAAH 164
           +QI  G  + L ++      SV+S G  L G LGHG  T +        F  +N      
Sbjct: 306 VQIAAGYCYLLALACQPNGMSVYSVGCGLGGKLGHGSRTDEKYPRVIEQFKILNLQPRV- 364

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
              V+A   HAA V Q G+V T G     C GH +       P++VE L  V    V  G
Sbjct: 365 ---VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV-PKVVEGLNHVKAVHVATG 420

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP--------TPKSIAPLEEVGS-VVQIA 275
              T  ++  G V++ G      LGH  + D          +P  +  L++    VVQI+
Sbjct: 421 DYTTFVVSDDGDVYSFGCGESASLGHHPSFDEQGNRHANVLSPAVVTSLKQANERVVQIS 480

Query: 276 AGPS-----YMLAVTGNGVVYSFGSGSNFCLG 302
              S     +  A+T +G +Y+FG+G    LG
Sbjct: 481 LTNSIYWNAHTFALTESGKLYAFGAGDQGQLG 512



 Score = 47.8 bits (112), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 30/76 (39%), Positives = 42/76 (55%), Gaps = 4/76 (5%)

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR-KGIHVVRVSAG 331
           Q  AGP + +AVT  G VY+FG  ++  LGHG  H E Q R IQ  R  +GI +++ +AG
Sbjct: 148 QAVAGPGHSIAVTSKGEVYTFGYNNSGQLGHG--HTEEQAR-IQPVRSLQGIRIIQAAAG 204

Query: 332 DEHVVALDSSGYVSLC 347
               + +   G V  C
Sbjct: 205 AARTMLISDDGKVYAC 220


>gi|42572533|ref|NP_974362.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|9279617|dbj|BAB01075.1| unnamed protein product [Arabidopsis thaliana]
 gi|110740358|dbj|BAF02074.1| hypothetical protein [Arabidopsis thaliana]
 gi|332643596|gb|AEE77117.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
          Length = 532

 Score =  140 bits (353), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 114/347 (32%), Positives = 161/347 (46%), Gaps = 22/347 (6%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCAL 67
           F +   PS ++  +LT  RL   DLA+LE T   F       P    SL +LAA  +C  
Sbjct: 46  FPLAANPS-IVLHVLTECRLDPRDLANLEATCSFFSQPANFAPDINLSLSELAALDMCNK 104

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLI- 126
             I+  M+   + E+  RC G+WK VLRFL + E      ++     Q   G  H++ + 
Sbjct: 105 RVIFKPMNEEERQEMKRRCGGSWKLVLRFLLAGEACCRREKS-----QAVAGPGHSVAVT 159

Query: 127 SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 186
           S   V++ G +  G LGHG  T        +       ++Q +A       +   G+V+ 
Sbjct: 160 SKGEVYTFGYNNSGQLGHG-HTEDEARIQPVRSLQGVRIIQAAAGAARTMLISDDGKVYA 218

Query: 187 CGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
           CG  S      G + T +P+  P+LV +LK +   Q   G  FT  L+  G V+T     
Sbjct: 219 CGKESFGEAEYGGQGT-KPVTTPQLVTSLKNIFVVQAAIGNYFTAVLSREGKVYTFSWGN 277

Query: 245 HGQLGH----GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT--GNGV-VYSFGSGS 297
            G+LGH     D   RP    + PLE V  VVQIAAG  Y+LA+    NG+ VYS G G 
Sbjct: 278 DGRLGHQTEAADVEPRPL---LGPLENV-PVVQIAAGYCYLLALACQPNGMSVYSVGCGL 333

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              LGHG + DE  PR I+ F+   +    V+AG  H   +   G V
Sbjct: 334 GGKLGHGSRTDEKYPRVIEQFQILNLQPRVVAAGAWHAAVVGQDGRV 380



 Score = 55.1 bits (131), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 68/252 (26%), Positives = 100/252 (39%), Gaps = 29/252 (11%)

Query: 114 MQITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
           +Q   G Y T ++S       FS G+   G LGH  E         +       VVQ++A
Sbjct: 252 VQAAIGNYFTAVLSREGKVYTFSWGND--GRLGHQTEAADVEPRPLLGPLENVPVVQIAA 309

Query: 171 SENHA-AFVLQSG--QVFT--CGDNSSFCCGHRDTNRPIFRPRLVEALK--GVPCKQVTA 223
              +  A   Q     V++  CG       G R   +    PR++E  +   +  + V A
Sbjct: 310 GYCYLLALACQPNGMSVYSVGCGLGGKLGHGSRTDEK---YPRVIEQFQILNLQPRVVAA 366

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G      +   G V T G   +G LGHG+      PK +  L  V   V +A G      
Sbjct: 367 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVEGLSHV-KAVHVATGDYTTFV 425

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDE--------LQPRAIQTFRRKGIHVVRVSA----- 330
           V+ +G VYSFG G +  LGH    DE        L P  + + ++    +V++S      
Sbjct: 426 VSDDGDVYSFGCGESASLGHHPSFDEQGNRHANVLSPTVVTSLKQVNERMVQISLTNSIY 485

Query: 331 GDEHVVALDSSG 342
            + H  AL  SG
Sbjct: 486 WNAHTFALTESG 497



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 2/75 (2%)

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
           Q  AGP + +AVT  G VY+FG  ++  LGHG   DE + + +++   +G+ +++ +AG 
Sbjct: 147 QAVAGPGHSVAVTSKGEVYTFGYNNSGQLGHGHTEDEARIQPVRSL--QGVRIIQAAAGA 204

Query: 333 EHVVALDSSGYVSLC 347
              + +   G V  C
Sbjct: 205 ARTMLISDDGKVYAC 219


>gi|357463175|ref|XP_003601869.1| RCC1 domain-containing protein [Medicago truncatula]
 gi|355490917|gb|AES72120.1| RCC1 domain-containing protein [Medicago truncatula]
          Length = 535

 Score =  138 bits (347), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 112/343 (32%), Positives = 164/343 (47%), Gaps = 14/343 (4%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCAL 67
           F +   PS ++  +LTS  L   DLA LE T   F       P    SL +LAA  +C  
Sbjct: 49  FPLSASPS-IVLHVLTSCNLDPQDLAKLEATCSFFRQPANFAPDFALSLAELAAFDMCMK 107

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLI- 126
            +I+  M+   + +L  RC G+WK VLR+L + E      ++     Q   G  H++ + 
Sbjct: 108 RAIFKPMTTEERQDLKQRCGGSWKLVLRYLLAGEACCRREKS-----QAIAGPGHSIAVT 162

Query: 127 SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 186
           S   V+S GS+  G LGHG  T +      I       ++Q +A       +  SGQV+ 
Sbjct: 163 SKGDVYSFGSNSSGQLGHG-TTEEEWRPKPIRTLQGIRIIQAAAGAGRTMLITDSGQVYA 221

Query: 187 CGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH 245
            G +S     +    ++ +  PRLVE+LK +   Q   G  FT  L+  G V+T    + 
Sbjct: 222 FGKDSFGEAEYGGQGSKTVIAPRLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGSD 281

Query: 246 GQLG-HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM--LAVTGNGV-VYSFGSGSNFCL 301
           G+LG H D+ D      +  LE++  VVQIAAG  Y+  LA   +G+ VYS G G    L
Sbjct: 282 GKLGHHTDSNDMEPHPLLGALEDI-PVVQIAAGYCYLLCLACQPSGMSVYSVGCGLGGKL 340

Query: 302 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           GHG + DE  PR I+ F+   +  + +SAG  H   +   G V
Sbjct: 341 GHGTRTDEKFPRLIEQFQTLNLQPMVISAGAWHAAVVGRDGRV 383



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 64/216 (29%), Positives = 94/216 (43%), Gaps = 36/216 (16%)

Query: 114 MQITTGRYHTLLI----SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-- 167
           +QI  G  + L +    S  SV+S G  L G LGHG  T +        FP      Q  
Sbjct: 308 VQIAAGYCYLLCLACQPSGMSVYSVGCGLGGKLGHGTRTDE-------KFPRLIEQFQTL 360

Query: 168 ------VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
                 +SA   HAA V + G+V T G     C GH +       P++V+AL  V    V
Sbjct: 361 NLQPMVISAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECEA-APKVVDALTNVKAVHV 419

Query: 222 TAGLNFTGFLTIR-GHVHTCGSNTHGQLGHGDTLDRP--------TPKSIAPLEEVGS-V 271
             G ++T F+    G V++ G      LGH   +D           P+ +  L+++   V
Sbjct: 420 ATG-DYTTFVVAEDGDVYSFGCGESASLGHNAVIDAEGNRHANVLNPELVTSLKQINERV 478

Query: 272 VQIAAGPS-----YMLAVTGNGVVYSFGSGSNFCLG 302
           VQI+   S     +  A+T +G +Y+FG+G    LG
Sbjct: 479 VQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 514



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 67/250 (26%), Positives = 101/250 (40%), Gaps = 25/250 (10%)

Query: 114 MQITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
           +Q   G + T ++S       FS GS   G LGH  ++        +       VVQ++A
Sbjct: 255 VQAAIGNFFTAVLSREGRVYTFSWGSD--GKLGHHTDSNDMEPHPLLGALEDIPVVQIAA 312

Query: 171 SENHA---AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ--VTAGL 225
              +    A       V++ G       GH       F PRL+E  + +  +   ++AG 
Sbjct: 313 GYCYLLCLACQPSGMSVYSVGCGLGGKLGHGTRTDEKF-PRLIEQFQTLNLQPMVISAGA 371

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
                +   G V T G   +G LGHG+      PK +  L  V   V +A G      V 
Sbjct: 372 WHAAVVGRDGRVCTWGWGRYGCLGHGNEECEAAPKVVDALTNV-KAVHVATGDYTTFVVA 430

Query: 286 GNGVVYSFGSGSNFCLGH-------GEQH-DELQPRAIQTFRRKGIHVVRVSA-----GD 332
            +G VYSFG G +  LGH       G +H + L P  + + ++    VV++S       +
Sbjct: 431 EDGDVYSFGCGESASLGHNAVIDAEGNRHANVLNPELVTSLKQINERVVQISLTNSIYWN 490

Query: 333 EHVVALDSSG 342
            H  AL  SG
Sbjct: 491 AHTFALTESG 500


>gi|115488190|ref|NP_001066582.1| Os12g0284000 [Oryza sativa Japonica Group]
 gi|77554669|gb|ABA97465.1| regulator of chromosome condensation, putative, expressed [Oryza
           sativa Japonica Group]
 gi|77554670|gb|ABA97466.1| regulator of chromosome condensation, putative, expressed [Oryza
           sativa Japonica Group]
 gi|108862484|gb|ABA97467.2| regulator of chromosome condensation, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113649089|dbj|BAF29601.1| Os12g0284000 [Oryza sativa Japonica Group]
 gi|215694343|dbj|BAG89336.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215694576|dbj|BAG89767.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215704369|dbj|BAG93803.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222616915|gb|EEE53047.1| hypothetical protein OsJ_35777 [Oryza sativa Japonica Group]
          Length = 534

 Score =  136 bits (343), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 113/350 (32%), Positives = 167/350 (47%), Gaps = 28/350 (8%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCAL 67
           F +   PS ++  +LTS  L   DLAHLE T   F       P    S+ +LAA  +C  
Sbjct: 49  FPLAANPS-IVLHVLTSCNLEPDDLAHLEATCSFFRKPANFPPDFQLSMSELAALDMCQK 107

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLIS 127
            +I+  M++  +     RC G+WK VLRF+ + E      ++     Q   G  H++ ++
Sbjct: 108 RAIFKPMTQQEREMFKQRCGGSWKLVLRFIMAGEACCRREKS-----QAIAGPGHSIAVT 162

Query: 128 NS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
            S +V++ GS+  G LGHG       P   + +   RI        +Q +A       V 
Sbjct: 163 TSGAVYTFGSNSSGQLGHGSLEEEWRPRIIRSLQGIRI--------IQAAAGAGRTMLVS 214

Query: 180 QSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
            +G+V+  G +S     +    +R +  P+LVE+LK +   Q   G  FT  L+  GHV+
Sbjct: 215 DAGRVYAFGKDSFGEVEYAAQGSRVVTTPQLVESLKDIYIVQAAIGNFFTAVLSREGHVY 274

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVT--GNGV-VYSFG 294
           T       +LGH    +   P  +A PLE +  VVQIAAG  Y+LA+    +G+ VYS G
Sbjct: 275 TFSWGNDMKLGHQTEPNDVQPHLLAGPLENI-PVVQIAAGYCYLLALACQPSGMSVYSVG 333

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            G    LGHG + DE  PR I+ F+   I  V V+AG  H   +   G V
Sbjct: 334 CGLGGKLGHGSRTDEKYPRLIEQFQALNIQPVVVAAGAWHAAVVGKDGRV 383



 Score = 54.7 bits (130), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 94/209 (44%), Gaps = 23/209 (11%)

Query: 114 MQITTGRYHTLLI----SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-- 167
           +QI  G  + L +    S  SV+S G  L G LGHG  T +   + R+     A  +Q  
Sbjct: 308 VQIAAGYCYLLALACQPSGMSVYSVGCGLGGKLGHGSRTDE--KYPRLIEQFQALNIQPV 365

Query: 168 -VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
            V+A   HAA V + G+V T G     C GH +       P++VE+L  V    V  G  
Sbjct: 366 VVAAGAWHAAVVGKDGRVCTWGWGRYGCLGHGNEECESV-PKVVESLVNVRAVHVATGDY 424

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTLD---RPT----PKSIAPLEEVGS-VVQIAAGP 278
            T  ++ +G V++ G      LGH    +   R T    P+ +  L+     V QI+   
Sbjct: 425 TTFVVSDKGDVYSFGCGESSSLGHNTITEGNNRHTNVLSPELVTSLKRTNERVAQISLTN 484

Query: 279 S-----YMLAVTGNGVVYSFGSGSNFCLG 302
           S     +  A+T +G +Y+FG+G    LG
Sbjct: 485 SIYWNAHTFALTDSGKLYAFGAGDKGQLG 513



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 73/273 (26%), Positives = 104/273 (38%), Gaps = 33/273 (12%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPET 148
           RV+   Q VE   DI       +Q   G + T ++S       FS G+ +   LGH  E 
Sbjct: 238 RVVTTPQLVESLKDIY-----IVQAAIGNFFTAVLSREGHVYTFSWGNDM--KLGHQTEP 290

Query: 149 TQCVSFTRINFPSAAHVVQVSASENHA-AFVLQSG--QVFT--CGDNSSFCCGHRDTNRP 203
                           VVQ++A   +  A   Q     V++  CG       G R   + 
Sbjct: 291 NDVQPHLLAGPLENIPVVQIAAGYCYLLALACQPSGMSVYSVGCGLGGKLGHGSRTDEK- 349

Query: 204 IFRPRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 261
              PRL+E  + +  + V   AG      +   G V T G   +G LGHG+      PK 
Sbjct: 350 --YPRLIEQFQALNIQPVVVAAGAWHAAVVGKDGRVCTWGWGRYGCLGHGNEECESVPKV 407

Query: 262 IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-------GEQHDELQPRA 314
           +  L  V   V +A G      V+  G VYSFG G +  LGH           + L P  
Sbjct: 408 VESLVNV-RAVHVATGDYTTFVVSDKGDVYSFGCGESSSLGHNTITEGNNRHTNVLSPEL 466

Query: 315 IQTFRRKGIHVVRVSA-----GDEHVVALDSSG 342
           + + +R    V ++S       + H  AL  SG
Sbjct: 467 VTSLKRTNERVAQISLTNSIYWNAHTFALTDSG 499


>gi|218186674|gb|EEC69101.1| hypothetical protein OsI_38005 [Oryza sativa Indica Group]
          Length = 534

 Score =  135 bits (340), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 112/354 (31%), Positives = 162/354 (45%), Gaps = 36/354 (10%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCAL 67
           F +   PS ++  +LTS  L   DLAHLE T   F       P    S+ +LAA  +C  
Sbjct: 49  FPLAANPS-IVLHVLTSCNLEPDDLAHLEATCSFFRKPANFPPDFQLSMSELAALDMCQK 107

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVE-----HSSDIVETSAGNMQITTGRYH 122
            +I+  M++  +     RC G+WK VLRF+ + E       S  +     ++ +TTG   
Sbjct: 108 RAIFKPMTQQEREMFKQRCGGSWKLVLRFIMAGEACCRREKSQAIAGPGHSIAVTTG--- 164

Query: 123 TLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSASENHA 175
                  +V++ GS+  G LGHG       P   + +   RI        +Q +A     
Sbjct: 165 ------GAVYTFGSNSSGQLGHGSLEEEWRPRIIRSLQGIRI--------IQAAAGAGRT 210

Query: 176 AFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
             V  +G+V+  G +S     +    +R +  P+LVE+LK +   Q   G  FT  L+  
Sbjct: 211 MLVSDAGRVYAFGKDSFGEVEYAAQGSRVVTTPQLVESLKDIYIVQAAIGNFFTAVLSRE 270

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVT---GNGVV 290
           GHV+T       +LGH    +   P  +A PLE +  VVQIAAG  Y+LA+        V
Sbjct: 271 GHVYTFSWGNDMKLGHQTEPNDVQPHLLAGPLENI-PVVQIAAGYCYLLALACQPSGMSV 329

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           YS G G    LGHG + DE  PR I+ F+   I  V V+AG  H   +   G V
Sbjct: 330 YSVGCGLGGKLGHGSRTDEKYPRLIEQFQALNIQPVVVAAGAWHAAVVGKDGRV 383



 Score = 54.3 bits (129), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 76/279 (27%), Positives = 115/279 (41%), Gaps = 34/279 (12%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           PQ   SL D+   Q    +   A +SR   +   +     W   ++     E +      
Sbjct: 243 PQLVESLKDIYIVQAAIGNFFTAVLSREGHVYTFS-----WGNDMKLGHQTEPNDVQPHL 297

Query: 110 SAGNM------QITTGRYHTLLI----SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINF 159
            AG +      QI  G  + L +    S  SV+S G  L G LGHG  T +   + R+  
Sbjct: 298 LAGPLENIPVVQIAAGYCYLLALACQPSGMSVYSVGCGLGGKLGHGSRTDE--KYPRLIE 355

Query: 160 PSAAHVVQ---VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
              A  +Q   V+A   HAA V + G+V T G     C GH +       P++VE+L  V
Sbjct: 356 QFQALNIQPVVVAAGAWHAAVVGKDGRVCTWGWGRYGCLGHGNEECESV-PKVVESLVNV 414

Query: 217 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD---RPT----PKSIAPLEEVG 269
               V  G   T  ++ +G V++ G      LGH    +   R T    P+ +  L+   
Sbjct: 415 RAIHVATGDYTTFVVSDKGDVYSFGCGESSSLGHNTITEGNNRHTNVLSPELVTSLKRTN 474

Query: 270 S-VVQIAAGPS-----YMLAVTGNGVVYSFGSGSNFCLG 302
             V QI+   S     +  A+T +G +Y+FG+G    LG
Sbjct: 475 ERVAQISLTNSIYWNAHTFALTDSGKLYAFGAGDKGQLG 513



 Score = 52.0 bits (123), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 72/273 (26%), Positives = 104/273 (38%), Gaps = 33/273 (12%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPET 148
           RV+   Q VE   DI       +Q   G + T ++S       FS G+ +   LGH  E 
Sbjct: 238 RVVTTPQLVESLKDIY-----IVQAAIGNFFTAVLSREGHVYTFSWGNDM--KLGHQTEP 290

Query: 149 TQCVSFTRINFPSAAHVVQVSASENHA-AFVLQSG--QVFT--CGDNSSFCCGHRDTNRP 203
                           VVQ++A   +  A   Q     V++  CG       G R   + 
Sbjct: 291 NDVQPHLLAGPLENIPVVQIAAGYCYLLALACQPSGMSVYSVGCGLGGKLGHGSRTDEK- 349

Query: 204 IFRPRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 261
              PRL+E  + +  + V   AG      +   G V T G   +G LGHG+      PK 
Sbjct: 350 --YPRLIEQFQALNIQPVVVAAGAWHAAVVGKDGRVCTWGWGRYGCLGHGNEECESVPKV 407

Query: 262 IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-------GEQHDELQPRA 314
           +  L  V   + +A G      V+  G VYSFG G +  LGH           + L P  
Sbjct: 408 VESLVNV-RAIHVATGDYTTFVVSDKGDVYSFGCGESSSLGHNTITEGNNRHTNVLSPEL 466

Query: 315 IQTFRRKGIHVVRVSA-----GDEHVVALDSSG 342
           + + +R    V ++S       + H  AL  SG
Sbjct: 467 VTSLKRTNERVAQISLTNSIYWNAHTFALTDSG 499


>gi|356511051|ref|XP_003524245.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Glycine max]
          Length = 534

 Score =  135 bits (339), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 109/343 (31%), Positives = 162/343 (47%), Gaps = 14/343 (4%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCAL 67
           F + + PS ++  +LT+  L A DLA LE T   F       P    SL +LAA  +C  
Sbjct: 48  FPLSDNPS-IVLHVLTTCNLYAQDLAKLEATCSFFKRPANFDPDFDLSLSELAALDMCQK 106

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLI- 126
            +I+  M+   +  L  RC G+WK VLRFL + E      ++     Q+  G  H++ + 
Sbjct: 107 RAIFNPMTTEQRQHLKQRCGGSWKLVLRFLLAGEACYRREKS-----QVIAGPGHSIAVT 161

Query: 127 SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 186
           S   V+S GS+  G LGHG  T        I       ++Q +A+      +  SGQV+ 
Sbjct: 162 SKGVVYSFGSNSSGQLGHG-TTEDGWQPRPIRALQGIRIIQATAATGRTMLISDSGQVYA 220

Query: 187 CGDNSSFCCGH--RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
            G    FC      + ++ +  P+LVE+LK +   Q   G  FT  L+  G V+T    +
Sbjct: 221 FG-KQYFCENEIGNEGSKMVTTPQLVESLKNIFVVQAAIGNYFTAVLSREGRVYTFSWGS 279

Query: 245 HGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM--LAVTGNGV-VYSFGSGSNFCL 301
            G+L H    +   P+ +    E   VVQIAAG  Y+  LA   +G+ VYS G G    L
Sbjct: 280 DGKLCHQTDPNDVEPRPLLGALEHIPVVQIAAGFCYLLCLACQPSGMSVYSVGCGMGGKL 339

Query: 302 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           GHG + DE  PR I+ F+   +  + ++AG  H   +   G V
Sbjct: 340 GHGTETDEKYPRLIEQFQLLNLQPMVIAAGSWHAAVVGQDGRV 382



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 70/231 (30%), Positives = 103/231 (44%), Gaps = 35/231 (15%)

Query: 114 MQITTGRYHTLLI----SNSSVFSCGSSLCGVLGHGPETTQ-----CVSFTRINFPSAAH 164
           +QI  G  + L +    S  SV+S G  + G LGHG ET +        F  +N      
Sbjct: 307 VQIAAGFCYLLCLACQPSGMSVYSVGCGMGGKLGHGTETDEKYPRLIEQFQLLNL----Q 362

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
            + ++A   HAA V Q G+V T G     C GH +    +  P++VE LK V    V AG
Sbjct: 363 PMVIAAGSWHAAVVGQDGRVCTWGWGRHGCLGHGNEECALV-PKVVEELKNVKAVHVAAG 421

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDT--------LDRPTPKSIAPLEE-VGSVVQIA 275
              T  ++  G  ++ G    G LGH            D  TPK +  +++    V+QI+
Sbjct: 422 DYTTFVVSDSGDAYSFGYGESGTLGHDPENPEQEHMHADVLTPKLVTSMKQNYERVIQIS 481

Query: 276 AGPS-----YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 321
              S     +  A+T +G +Y+FG+G    LG       ++ R  QT RRK
Sbjct: 482 LTNSVYWIAHTFALTESGKLYAFGAGDKGQLG-------VELRPYQTERRK 525



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 68/151 (45%), Gaps = 16/151 (10%)

Query: 207 PRLVEALKGVPCKQ--VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
           PRL+E  + +  +   + AG      +   G V T G   HG LGHG+      PK +  
Sbjct: 350 PRLIEQFQLLNLQPMVIAAGSWHAAVVGQDGRVCTWGWGRHGCLGHGNEECALVPKVVEE 409

Query: 265 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE--------LQPRAIQ 316
           L+ V   V +AAG      V+ +G  YSFG G +  LGH  ++ E        L P+ + 
Sbjct: 410 LKNV-KAVHVAAGDYTTFVVSDSGDAYSFGYGESGTLGHDPENPEQEHMHADVLTPKLVT 468

Query: 317 TFRRKGIHVVRVSAGDE-----HVVALDSSG 342
           + ++    V+++S  +      H  AL  SG
Sbjct: 469 SMKQNYERVIQISLTNSVYWIAHTFALTESG 499


>gi|229576492|gb|ACQ82636.1| At3g15430-like protein [Solanum quitoense]
 gi|229576494|gb|ACQ82637.1| At3g15430-like protein [Solanum quitoense]
          Length = 91

 Score =  134 bits (336), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 63/90 (70%), Positives = 74/90 (82%)

Query: 24  SGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCALHSIYAGMSRNVQIELL 83
           SGRL+ +DL  LELTS+TF G+HGL+P+KF+SLVD AA QLCAL  IYA +  N Q ELL
Sbjct: 2   SGRLAGIDLISLELTSRTFRGTHGLFPKKFKSLVDYAAFQLCALSPIYASLHCNAQEELL 61

Query: 84  NRCNGNWKRVLRFLQSVEHSSDIVETSAGN 113
            RCN NWKR+LRFLQ+VE SSD+VETSAGN
Sbjct: 62  KRCNDNWKRLLRFLQAVEQSSDMVETSAGN 91


>gi|229576490|gb|ACQ82635.1| At3g15430-like protein [Solanum hirtum]
          Length = 90

 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 63/90 (70%), Positives = 74/90 (82%)

Query: 24  SGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCALHSIYAGMSRNVQIELL 83
           SGRL+ +DL  LELTS+TF G+HGL+P+KF+SLVD AA QLCAL  IYA +  N Q ELL
Sbjct: 1   SGRLAGIDLISLELTSRTFRGTHGLFPKKFKSLVDYAAFQLCALSPIYASLHCNAQEELL 60

Query: 84  NRCNGNWKRVLRFLQSVEHSSDIVETSAGN 113
            RCN NWKR+LRFLQ+VE SSD+VETSAGN
Sbjct: 61  KRCNDNWKRLLRFLQAVEQSSDMVETSAGN 90


>gi|356525411|ref|XP_003531318.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like isoform
           1 [Glycine max]
          Length = 539

 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 112/347 (32%), Positives = 162/347 (46%), Gaps = 20/347 (5%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCAL 67
           F +   PS ++  +LT+  L   DLA LE T   F       P    SL +LAA  +C  
Sbjct: 51  FPLSANPS-IVLHVLTTCNLYPQDLAKLEATCSFFKQPANFAPDFDLSLSELAALDMCQK 109

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLI- 126
            +I+  M+   +  L  RC G+WK VLRFL + E      E S    Q+  G  H++ + 
Sbjct: 110 RAIFKPMTTEQRQHLKQRCGGSWKLVLRFLLAGEACCRRREKS----QVIAGPGHSIAVT 165

Query: 127 SNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAFVLQSGQVF 185
           S   V+S GS+  G LGHG  TT+ V   R I       ++Q +A       +  SGQ +
Sbjct: 166 SKGVVYSFGSNSSGQLGHG--TTEDVWQPRPIRALQGIRIIQATAMTGRTMLISDSGQAY 223

Query: 186 TCGDNSSFCCGHRDT-----NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
             G  S    G  +T     ++ +  P+LVE+LK +   Q   G  FT  L+  G V+T 
Sbjct: 224 VFGKES---FGEVETIVNRGSKIVTTPQLVESLKNIFVVQAAMGNYFTAVLSREGRVYTF 280

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM--LAVTGNGV-VYSFGSGS 297
                G+L H    +   P+ +    E   VVQIAAG  Y+  LA   +G+ VYS G G 
Sbjct: 281 SWGCVGKLCHQTDQNDVEPRPLLGALEHIPVVQIAAGFCYLLCLACQPSGMSVYSVGCGL 340

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              LGHG + +E  PR I+ F+   +  + ++AG  H   +   G V
Sbjct: 341 GGKLGHGTKTNEEYPRLIEQFQLLNLQPMAIAAGSWHAAVVGQDGRV 387



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 78/271 (28%), Positives = 123/271 (45%), Gaps = 37/271 (13%)

Query: 90  WK-RVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCG----VLG 143
           W+ R +R LQ +     I++ +A      TGR  T+LIS+S   +  G    G    ++ 
Sbjct: 190 WQPRPIRALQGIR----IIQATA-----MTGR--TMLISDSGQAYVFGKESFGEVETIVN 238

Query: 144 HGPE---TTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH--R 198
            G +   T Q V   +  F     VVQ +      A + + G+V+T    S  C G    
Sbjct: 239 RGSKIVTTPQLVESLKNIF-----VVQAAMGNYFTAVLSREGRVYTF---SWGCVGKLCH 290

Query: 199 DTNRPIFRPR-LVEALKGVPCKQVTAGLNFTGFLTIRGH---VHTCGSNTHGQLGHGDTL 254
            T++    PR L+ AL+ +P  Q+ AG  +   L  +     V++ G    G+LGHG   
Sbjct: 291 QTDQNDVEPRPLLGALEHIPVVQIAAGFCYLLCLACQPSGMSVYSVGCGLGGKLGHGTKT 350

Query: 255 DRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPR 313
           +   P+ I   + +    + IAAG  +   V  +G V ++G GS  CLGHG +  EL P+
Sbjct: 351 NEEYPRLIEQFQLLNLQPMAIAAGSWHAAVVGQDGRVCTWGWGSYGCLGHGNEECELVPK 410

Query: 314 AIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            ++  R   +  V V+ GD     +  SG V
Sbjct: 411 VVEELRN--VKAVHVATGDFTTFVVSDSGDV 439



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 67/213 (31%), Positives = 101/213 (47%), Gaps = 30/213 (14%)

Query: 114 MQITTGRYHTLLI----SNSSVFSCGSSLCGVLGHGPETTQ-----CVSFTRINFPSAAH 164
           +QI  G  + L +    S  SV+S G  L G LGHG +T +        F  +N    A 
Sbjct: 312 VQIAAGFCYLLCLACQPSGMSVYSVGCGLGGKLGHGTKTNEEYPRLIEQFQLLNLQPMA- 370

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
              ++A   HAA V Q G+V T G  S  C GH +    +  P++VE L+ V    V  G
Sbjct: 371 ---IAAGSWHAAVVGQDGRVCTWGWGSYGCLGHGNEECELV-PKVVEELRNVKAVHVATG 426

Query: 225 LNFTGFL-TIRGHVHTCGSNTHGQLGH-------GDTLDRP-TPKSIAPLEEVGS-VVQI 274
            +FT F+ +  G V++ G    G LGH        D  +   TPK +  ++++   VVQI
Sbjct: 427 -DFTTFVVSDSGDVYSFGYGESGSLGHVPENHEQEDMHENVLTPKLVTWMKQINERVVQI 485

Query: 275 AA-----GPSYMLAVTGNGVVYSFGSGSNFCLG 302
           +        ++  A+T +G +Y+FG+G    LG
Sbjct: 486 SLTNFIYWNAHTFALTESGKLYAFGAGDKGQLG 518



 Score = 51.6 bits (122), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 67/151 (44%), Gaps = 16/151 (10%)

Query: 207 PRLVEALK--GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
           PRL+E  +   +    + AG      +   G V T G  ++G LGHG+      PK +  
Sbjct: 355 PRLIEQFQLLNLQPMAIAAGSWHAAVVGQDGRVCTWGWGSYGCLGHGNEECELVPKVVEE 414

Query: 265 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDE-------LQPRAIQ 316
           L  V   V +A G      V+ +G VYSFG G +  LGH  E H++       L P+ + 
Sbjct: 415 LRNV-KAVHVATGDFTTFVVSDSGDVYSFGYGESGSLGHVPENHEQEDMHENVLTPKLVT 473

Query: 317 TFRRKGIHVVRVSA-----GDEHVVALDSSG 342
             ++    VV++S       + H  AL  SG
Sbjct: 474 WMKQINERVVQISLTNFIYWNAHTFALTESG 504


>gi|326526993|dbj|BAK00885.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 534

 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 110/351 (31%), Positives = 165/351 (47%), Gaps = 30/351 (8%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCAL 67
           F +   PS ++  +LTS  L   DLAHLE T K F       P     + +LAA  +C  
Sbjct: 49  FPLAANPS-IVLHVLTSCNLYPEDLAHLEATCKFFRKPANFPPDFLLPMSELAALDMCQK 107

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLIS 127
            +I+  MS   +     RC G+WK VLRF+ + E      ++     Q   G  H++ +S
Sbjct: 108 RAIFKPMSTQEREMFKQRCGGSWKLVLRFIMAGEACCRREKS-----QAIAGPGHSIAVS 162

Query: 128 NS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
            S + ++ GS+  G LGH        P   + +   RI        +Q +A       V 
Sbjct: 163 TSGAAYTFGSNNSGQLGHASLEEEWRPRPVRSLQGIRI--------IQAAAGAGRTMLVS 214

Query: 180 QSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
            +G+V+  G +S      G++ + R +  P++VE+LK +   Q   G  FT  L+  G V
Sbjct: 215 DAGRVYAFGKDSFGEVEFGNQGS-RAVATPQMVESLKDIYIVQAAIGNFFTAVLSREGCV 273

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVT--GNGV-VYSF 293
           +T    +  +LGH    +   P  +  PLE +  VVQIAAG  Y+LA+    +G+ VYS 
Sbjct: 274 YTFSWGSDMKLGHQTEPNDVQPHLLTGPLENI-PVVQIAAGYCYLLALACQPSGMSVYSV 332

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G G    LGHG + DE  PR I+ F+   I  + V+AG  H   +   G V
Sbjct: 333 GCGLGGKLGHGTRTDEKYPRLIEQFQTLNIQPIVVAAGAWHAAVVGKDGRV 383



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 62/211 (29%), Positives = 94/211 (44%), Gaps = 27/211 (12%)

Query: 114 MQITTGRYHTLLI----SNSSVFSCGSSLCGVLGHGPETTQ-----CVSFTRINFPSAAH 164
           +QI  G  + L +    S  SV+S G  L G LGHG  T +        F  +N      
Sbjct: 308 VQIAAGYCYLLALACQPSGMSVYSVGCGLGGKLGHGTRTDEKYPRLIEQFQTLNI----Q 363

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
            + V+A   HAA V + G+V T G     C GH +       P++VEAL  V    V  G
Sbjct: 364 PIVVAAGAWHAAVVGKDGRVCTWGWGRYGCLGHGNEECESV-PKVVEALSSVKAVYVATG 422

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-------TPKSIAPLEEVG-SVVQIAA 276
              T  ++ +G V++ G      LGH  T++         +P+ +  L+     VVQ++ 
Sbjct: 423 DYTTFIVSCKGDVYSFGCGESSSLGHNTTIEGNNRHSNVLSPELVTSLQSKNEKVVQVSL 482

Query: 277 GPS-----YMLAVTGNGVVYSFGSGSNFCLG 302
             S     +  A+T +G +Y+FG+G    LG
Sbjct: 483 TNSVYWNAHTFALTESGKLYAFGAGDKGQLG 513



 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 75/273 (27%), Positives = 105/273 (38%), Gaps = 33/273 (12%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPET 148
           R +   Q VE   DI       +Q   G + T ++S       FS GS +   LGH  E 
Sbjct: 238 RAVATPQMVESLKDIY-----IVQAAIGNFFTAVLSREGCVYTFSWGSDM--KLGHQTEP 290

Query: 149 TQCVSFTRINFPSAAHVVQVSASENHA-AFVLQSG--QVFT--CGDNSSFCCGHRDTNRP 203
                           VVQ++A   +  A   Q     V++  CG       G R   + 
Sbjct: 291 NDVQPHLLTGPLENIPVVQIAAGYCYLLALACQPSGMSVYSVGCGLGGKLGHGTRTDEK- 349

Query: 204 IFRPRLVEALKGVPCKQ--VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 261
              PRL+E  + +  +   V AG      +   G V T G   +G LGHG+      PK 
Sbjct: 350 --YPRLIEQFQTLNIQPIVVAAGAWHAAVVGKDGRVCTWGWGRYGCLGHGNEECESVPKV 407

Query: 262 IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-------GEQHDELQPRA 314
           +  L  V +V  +A G      V+  G VYSFG G +  LGH           + L P  
Sbjct: 408 VEALSSVKAVY-VATGDYTTFIVSCKGDVYSFGCGESSSLGHNTTIEGNNRHSNVLSPEL 466

Query: 315 IQTFRRKGIHVVRVSA-----GDEHVVALDSSG 342
           + + + K   VV+VS       + H  AL  SG
Sbjct: 467 VTSLQSKNEKVVQVSLTNSVYWNAHTFALTESG 499


>gi|229576496|gb|ACQ82638.1| At3g15430-like protein [Solanum hirtum]
          Length = 91

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 61/90 (67%), Positives = 72/90 (80%)

Query: 24  SGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCALHSIYAGMSRNVQIELL 83
           SGRL+ +DL  LELTS+TF G+HGL+P+KF+SLVD AA QLC    IYA +  N Q ELL
Sbjct: 2   SGRLAGIDLISLELTSRTFRGTHGLFPKKFKSLVDYAAFQLCXXSPIYASLHCNAQEELL 61

Query: 84  NRCNGNWKRVLRFLQSVEHSSDIVETSAGN 113
            RCN NWKR+LRFLQ+VE SSD+VETSAGN
Sbjct: 62  KRCNXNWKRLLRFLQAVEQSSDMVETSAGN 91


>gi|449435009|ref|XP_004135288.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Cucumis
           sativus]
 gi|449494867|ref|XP_004159669.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Cucumis
           sativus]
          Length = 534

 Score =  128 bits (321), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 108/342 (31%), Positives = 158/342 (46%), Gaps = 12/342 (3%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCAL 67
           F +   PS ++  +LT+  L   DLA LE T   F       P    S+ +LAA  +C  
Sbjct: 48  FPLAANPS-IVLHVLTACNLDPQDLAKLEATCSFFRQPANFAPDYELSISELAALDMCRK 106

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLIS 127
            +I+  M+      +  RC G+WK VLRFL + E           +M I    +   + S
Sbjct: 107 RAIFKPMTPEQHEAMKQRCGGSWKLVLRFLVAGESCC----RREKSMAIAGPGHSIAVTS 162

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAFVLQSGQVFT 186
             +V+S GS+  G LGHG  TT+  S  R I       ++Q +A       +  +G V+ 
Sbjct: 163 KGAVYSFGSNSSGQLGHG--TTEEQSPPRLIRSLQGIRIIQAAAGGGRTMLISDAGHVYA 220

Query: 187 CGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH 245
            G +S     +     + +  P+LVE+LK +   Q   G  FT  L+  G V+T    T 
Sbjct: 221 FGKDSFGEAEYGAQGAQVVTTPKLVESLKDIFVVQAAIGNFFTAVLSREGTVYTFSWGTD 280

Query: 246 GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT--GNGV-VYSFGSGSNFCLG 302
            +LGH    +   P+ +    E   VVQIAAG  Y+LA+    +G+ VYS G G    LG
Sbjct: 281 SRLGHHTEPNDLEPRPLKGALENIPVVQIAAGYCYLLALACHPSGMSVYSVGCGLGGKLG 340

Query: 303 HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           HG + DE  PR I+ F+   +  V V+AG  H   +   G V
Sbjct: 341 HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGRDGRV 382



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 64/213 (30%), Positives = 93/213 (43%), Gaps = 29/213 (13%)

Query: 114 MQITTGRYHTLLI----SNSSVFSCGSSLCGVLGHGPETTQ-----CVSFTRINFPSAAH 164
           +QI  G  + L +    S  SV+S G  L G LGHG  T +        F  +N      
Sbjct: 307 VQIAAGYCYLLALACHPSGMSVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL----Q 362

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
            V V+A   HAA V + G+V T G     C GH + +     P++VEAL  V    V  G
Sbjct: 363 PVVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEDCES-SPKVVEALINVKAVHVATG 421

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP---------TPKSIAPLEEVGS-VVQI 274
              T  ++  G V++ G      LGH   L             P+ +  L+++   VVQI
Sbjct: 422 DYTTFVVSDDGDVYSFGCGESASLGHNVVLPEEEGNRQPHVLKPELVRSLKQISERVVQI 481

Query: 275 AAGPS-----YMLAVTGNGVVYSFGSGSNFCLG 302
           +   S     +  A+T +G +Y+FG+G    LG
Sbjct: 482 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 514



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 72/172 (41%), Gaps = 20/172 (11%)

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNT 244
           CG       G R   +    PRL+E  + +  + V   AG      +   G V T G   
Sbjct: 333 CGLGGKLGHGSRTDEK---HPRLIEQFQLLNLQPVVVAAGAWHAAVVGRDGRVCTWGWGR 389

Query: 245 HGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH- 303
           +G LGHG+     +PK +  L  V   V +A G      V+ +G VYSFG G +  LGH 
Sbjct: 390 YGCLGHGNEDCESSPKVVEALINV-KAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHN 448

Query: 304 --------GEQHDELQPRAIQTFRRKGIHVVRVSA-----GDEHVVALDSSG 342
                     Q   L+P  +++ ++    VV++S       + H  AL  SG
Sbjct: 449 VVLPEEEGNRQPHVLKPELVRSLKQISERVVQISLTNSIYWNAHTFALTESG 500


>gi|225424560|ref|XP_002285332.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2 isoform 1
           [Vitis vinifera]
 gi|296081404|emb|CBI16837.3| unnamed protein product [Vitis vinifera]
          Length = 534

 Score =  128 bits (321), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 109/343 (31%), Positives = 160/343 (46%), Gaps = 14/343 (4%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCAL 67
           F +   PS ++  +LT+  L   DLA LE T   F       P    S+ +LAA  +C  
Sbjct: 48  FPLAANPS-IVLHVLTACNLEPQDLAKLEATCSFFRQPAHFAPDFELSISELAALDMCLK 106

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLIS 127
            +I+  M    +  L  RC G+WK VLRFL + E      ++     Q   G  H++ ++
Sbjct: 107 RAIFRPMMLEEREVLKQRCGGSWKLVLRFLLAGEACCRREKS-----QAIAGPGHSIAVT 161

Query: 128 -NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 186
              +V+S GS+  G LGHG  T +     +I       ++Q +A       +  +GQV+ 
Sbjct: 162 VKGAVYSFGSNSSGQLGHG-TTDEEWRPRQIRSLEGIRIIQAAAGAGRTMLISDAGQVYA 220

Query: 187 CGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
            G +S      G + T + +  P+LVE+LK +   Q   G  FT  L+  G V+T     
Sbjct: 221 FGKDSFGEAEYGVQGT-KLVTTPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGN 279

Query: 245 HGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT--GNGV-VYSFGSGSNFCL 301
             +LGH    +   P  +    E   VVQIAAG  Y+LA+    NG+ VYS G G    L
Sbjct: 280 DAKLGHQTEANDLEPHPLLGALENIPVVQIAAGYCYLLALACQPNGMSVYSVGCGLGGKL 339

Query: 302 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           GHG + DE  PR I+ FR   +  + V+AG  H   +   G V
Sbjct: 340 GHGTRTDEKHPRLIEQFRILNLQPMVVAAGAWHAAVVGRDGRV 382



 Score = 55.1 bits (131), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 61/212 (28%), Positives = 93/212 (43%), Gaps = 28/212 (13%)

Query: 114 MQITTGRYHTLLIS----NSSVFSCGSSLCGVLGHGPETTQ-----CVSFTRINFPSAAH 164
           +QI  G  + L ++      SV+S G  L G LGHG  T +        F  +N      
Sbjct: 307 VQIAAGYCYLLALACQPNGMSVYSVGCGLGGKLGHGTRTDEKHPRLIEQFRILNL----Q 362

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
            + V+A   HAA V + G+V T G     C GH +       P++VEAL  V    V  G
Sbjct: 363 PMVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECESV-PKVVEALINVKAVHVATG 421

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP--------TPKSIAPLEEVGS-VVQIA 275
              T  ++  G V++ G      LGH +  D          +P+ +  L+++   +VQI+
Sbjct: 422 DYTTFVVSDDGDVYSFGCGESSSLGHNNGPDGQGNRHANILSPELVTSLKQIKERMVQIS 481

Query: 276 AGPS-----YMLAVTGNGVVYSFGSGSNFCLG 302
              S     +  A+T  G +Y+FG+G    LG
Sbjct: 482 LTNSIYWNAHTFALTETGKLYAFGAGDKGQLG 513



 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 66/252 (26%), Positives = 101/252 (40%), Gaps = 29/252 (11%)

Query: 114 MQITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
           +Q   G + T ++S       FS G+     LGH  E         +       VVQ++A
Sbjct: 254 VQAAIGNFFTAVLSREGRVYTFSWGND--AKLGHQTEANDLEPHPLLGALENIPVVQIAA 311

Query: 171 SENHA-AFVLQSG--QVFT--CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ--VTA 223
              +  A   Q     V++  CG       G R   +    PRL+E  + +  +   V A
Sbjct: 312 GYCYLLALACQPNGMSVYSVGCGLGGKLGHGTRTDEK---HPRLIEQFRILNLQPMVVAA 368

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G      +   G V T G   +G LGHG+      PK +  L  V   V +A G      
Sbjct: 369 GAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECESVPKVVEALINV-KAVHVATGDYTTFV 427

Query: 284 VTGNGVVYSFGSGSNFCLGH-------GEQH-DELQPRAIQTFRRKGIHVVRVSA----- 330
           V+ +G VYSFG G +  LGH       G +H + L P  + + ++    +V++S      
Sbjct: 428 VSDDGDVYSFGCGESSSLGHNNGPDGQGNRHANILSPELVTSLKQIKERMVQISLTNSIY 487

Query: 331 GDEHVVALDSSG 342
            + H  AL  +G
Sbjct: 488 WNAHTFALTETG 499


>gi|255547958|ref|XP_002515036.1| RCC1 and BTB domain-containing protein, putative [Ricinus communis]
 gi|223546087|gb|EEF47590.1| RCC1 and BTB domain-containing protein, putative [Ricinus communis]
          Length = 537

 Score =  127 bits (319), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 109/348 (31%), Positives = 167/348 (47%), Gaps = 25/348 (7%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCAL 67
           F +   PS ++  +LT+  L   DLA LE ++     ++   P    S+ +LAA  +C  
Sbjct: 49  FPLAASPS-IVLHVLTTCNLDPQDLAKLEASALLLQPAN-FAPDYELSISELAALDMCQK 106

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLI- 126
            +I+  M+   + +L  RC G+WK VLRFL + E           N Q   G  H++ + 
Sbjct: 107 RAIFKPMTSEERRDLKQRCGGSWKLVLRFLLAGEAC-----CRRENSQAIAGPGHSIAVT 161

Query: 127 SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 186
           S   V+S GS+  G LGHG  T +     +I       ++Q +A       +  +GQV+ 
Sbjct: 162 SKGVVYSFGSNSSGQLGHG-NTEEEWRPRQIRSLQGIRIIQAAAGPGRTMLISDAGQVYA 220

Query: 187 CGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
            G +S      G + T + +  P+LVE+LK +   Q   G  FT  L+  G V+T    +
Sbjct: 221 FGKDSFGEAEYGVQGT-KLVTTPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGS 279

Query: 245 HGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVT--GNGV-VYSFGSG 296
            G+LGH     +  P  + P   +G+     VVQIAAG  Y+LA+    +G+ VYS G G
Sbjct: 280 DGKLGH-----QTEPTDVEPHPLLGALENIPVVQIAAGYCYLLALACQPSGMSVYSVGCG 334

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
               LGHG + DE  PR I+ F+   +  + V+AG  H   +   G V
Sbjct: 335 LGGKLGHGSRTDEKYPRLIEQFQLLNLQPMVVAAGAWHAAVVGRDGRV 382



 Score = 57.4 bits (137), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 63/215 (29%), Positives = 94/215 (43%), Gaps = 31/215 (14%)

Query: 114 MQITTGRYHTLLI----SNSSVFSCGSSLCGVLGHGPETTQ-----CVSFTRINFPSAAH 164
           +QI  G  + L +    S  SV+S G  L G LGHG  T +        F  +N      
Sbjct: 307 VQIAAGYCYLLALACQPSGMSVYSVGCGLGGKLGHGSRTDEKYPRLIEQFQLLNL----Q 362

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
            + V+A   HAA V + G+V T G     C GH +       P++V+AL  +    V  G
Sbjct: 363 PMVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECESV-PKVVDALSNIKAVHVATG 421

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGH-----------GDTLDRPTPKSIAPLEEVGS-VV 272
              T  ++  G V++ G      LGH           G   +  +P+ +  L+EV   VV
Sbjct: 422 DYTTFVVSEEGDVYSFGCGESASLGHNAAAAANADGQGRHANVLSPELVTSLKEVNERVV 481

Query: 273 QIAAGPS-----YMLAVTGNGVVYSFGSGSNFCLG 302
           QI+   S     +  A+T +G +Y+FG+G    LG
Sbjct: 482 QISLTNSIYWNAHTFALTDSGKLYAFGAGDKGQLG 516



 Score = 54.7 bits (130), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 69/255 (27%), Positives = 99/255 (38%), Gaps = 32/255 (12%)

Query: 114 MQITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
           +Q   G + T ++S       FS GS   G LGH  E T       +       VVQ++A
Sbjct: 254 VQAAIGNFFTAVLSREGRVYTFSWGSD--GKLGHQTEPTDVEPHPLLGALENIPVVQIAA 311

Query: 171 SENHA-AFVLQSG--QVFT--CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ--VTA 223
              +  A   Q     V++  CG       G R   +    PRL+E  + +  +   V A
Sbjct: 312 GYCYLLALACQPSGMSVYSVGCGLGGKLGHGSRTDEK---YPRLIEQFQLLNLQPMVVAA 368

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G      +   G V T G   +G LGHG+      PK +  L  +   V +A G      
Sbjct: 369 GAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECESVPKVVDALSNI-KAVHVATGDYTTFV 427

Query: 284 VTGNGVVYSFGSGSNFCLGH-----------GEQHDELQPRAIQTFRRKGIHVVRVSA-- 330
           V+  G VYSFG G +  LGH           G   + L P  + + +     VV++S   
Sbjct: 428 VSEEGDVYSFGCGESASLGHNAAAAANADGQGRHANVLSPELVTSLKEVNERVVQISLTN 487

Query: 331 ---GDEHVVALDSSG 342
               + H  AL  SG
Sbjct: 488 SIYWNAHTFALTDSG 502


>gi|403381060|ref|ZP_10923117.1| regulator of chromosome condensation rcc1, partial [Paenibacillus
           sp. JC66]
          Length = 851

 Score =  126 bits (317), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 102/302 (33%), Positives = 153/302 (50%), Gaps = 27/302 (8%)

Query: 48  LYPQKFRSLVDLAASQLCALHSIYAGMSRNVQ---IELLNRC-NGNWKRVLRFLQSVEHS 103
           L P+K   L D+ A      HS+    S +V      L  R  +GN    L   + +E  
Sbjct: 69  LAPKKIEGLSDIQAIAAGTNHSLALTKSGDVYSFGFGLFGRLGHGNTDSQLE-PKKIEGL 127

Query: 104 SDIVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA 162
           SDI         I  G +H+L ++ S  V+S G+   G LGHG    Q    T     S 
Sbjct: 128 SDI-------QAIAAGDFHSLALTKSGDVYSFGNGTSG-LGHGNTEDQS---TPKKIESL 176

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           + V  ++A  NH+  + +SG V++ G       GH DT+  +  P+ +E L  +  + + 
Sbjct: 177 SDVQAIAAGGNHSLALTKSGDVYSFGFGLFGRLGHGDTDSQL-EPKKIEDLSDI--QAIA 233

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
           AG N +  LT  G V++ G   HGQLGHGDT ++ TPK I   E++  +  +AAG ++ L
Sbjct: 234 AGGNHSLALTKSGDVYSFGWGLHGQLGHGDTENQLTPKKI---EDLSDIQAVAAGANHSL 290

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           A+T +G VYSFG G+   LGHG+  D+L P+ I+  +     +  ++AGD H +AL  SG
Sbjct: 291 ALTKSGEVYSFGRGNTGQLGHGDTDDQLTPKKIEGLK----DIQAIAAGDFHSLALTKSG 346

Query: 343 YV 344
            V
Sbjct: 347 DV 348



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 94/293 (32%), Positives = 146/293 (49%), Gaps = 22/293 (7%)

Query: 48  LYPQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIV 107
           L P+K   L D+ A      HS+    S +V         GN    L    + + S+   
Sbjct: 119 LEPKKIEGLSDIQAIAAGDFHSLALTKSGDV------YSFGNGTSGLGHGNTEDQSTPKK 172

Query: 108 ETSAGNMQ-ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV 165
             S  ++Q I  G  H+L ++ S  V+S G  L G LGHG   +Q            + +
Sbjct: 173 IESLSDVQAIAAGGNHSLALTKSGDVYSFGFGLFGRLGHGDTDSQ---LEPKKIEDLSDI 229

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
             ++A  NH+  + +SG V++ G       GH DT   +  P+ +E L  +  + V AG 
Sbjct: 230 QAIAAGGNHSLALTKSGDVYSFGWGLHGQLGHGDTENQL-TPKKIEDLSDI--QAVAAGA 286

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
           N +  LT  G V++ G    GQLGHGDT D+ TPK I  L+++ +   IAAG  + LA+T
Sbjct: 287 NHSLALTKSGEVYSFGRGNTGQLGHGDTDDQLTPKKIEGLKDIQA---IAAGDFHSLALT 343

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            +G VYSFG+G++  LGHG+  ++L+P+ I+        +  ++AG  H +AL
Sbjct: 344 KSGDVYSFGNGTS-GLGHGDTANQLEPKKIEGLT----DIQAIAAGANHSLAL 391



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 75/215 (34%), Positives = 118/215 (54%), Gaps = 14/215 (6%)

Query: 130 SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 189
           SVFS G  + G LGHG +T   ++  +I     + +  ++A  NH+  + +SG V++ G 
Sbjct: 48  SVFSFGMGMYGKLGHG-DTANQLAPKKIE--GLSDIQAIAAGTNHSLALTKSGDVYSFGF 104

Query: 190 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
                 GH +T+  +  P+ +E L  +  + + AG   +  LT  G V++ G+ T G LG
Sbjct: 105 GLFGRLGHGNTDSQL-EPKKIEGLSDI--QAIAAGDFHSLALTKSGDVYSFGNGTSG-LG 160

Query: 250 HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE 309
           HG+T D+ TPK I  L +V +   IAAG ++ LA+T +G VYSFG G    LGHG+   +
Sbjct: 161 HGNTEDQSTPKKIESLSDVQA---IAAGGNHSLALTKSGDVYSFGFGLFGRLGHGDTDSQ 217

Query: 310 LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           L+P+ I+        +  ++AG  H +AL  SG V
Sbjct: 218 LEPKKIEDLS----DIQAIAAGGNHSLALTKSGDV 248


>gi|356540207|ref|XP_003538581.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 530

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 110/343 (32%), Positives = 162/343 (47%), Gaps = 19/343 (5%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCAL 67
           F +   PS ++  +LT+  L   DLA LE T   F       P    SL +LAA  +C  
Sbjct: 48  FPLSANPS-IVLHVLTACNLDPQDLAKLEATCSFFRQPANFAPDSDLSLSELAALDMCQK 106

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLIS 127
            +I+  M+   + +L  RC G+WK VLR+L + E      ++     Q   G  H++ ++
Sbjct: 107 RAIFKPMTTEQRQDLKLRCGGSWKLVLRYLMAGEACCRREKS-----QAIAGPGHSIAVT 161

Query: 128 NSS-VFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAFVLQSGQVF 185
           +   V+S GS+  G LGHG  TT+     R I       ++Q +A       V  SGQV+
Sbjct: 162 SKGIVYSFGSNSSGQLGHG--TTEEEWRPRPIRTLQGIRIIQAAAGAGRTMLVSDSGQVY 219

Query: 186 TCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH 245
             G+      G    ++ +  P++VE+LK +   Q   G  FT  L+  G V+T    + 
Sbjct: 220 AFGEAEYGVQG----SKTVAAPQIVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGSD 275

Query: 246 GQLG-HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM--LAVTGNGV-VYSFGSGSNFCL 301
            +LG H D  D      +  LE +  VVQIAAG  Y+  LA   +G+ VYS G G    L
Sbjct: 276 EKLGHHTDQSDVEPHPLLGALENI-PVVQIAAGYCYLLCLACQPSGMSVYSVGCGLGGKL 334

Query: 302 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           GHG + DE  PR I+ F    +  + V+AG  H   +   G V
Sbjct: 335 GHGSRTDEEYPRLIEQFGLLNLQPMVVAAGAWHAAVVGRDGRV 377



 Score = 54.7 bits (130), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 63/216 (29%), Positives = 93/216 (43%), Gaps = 35/216 (16%)

Query: 114 MQITTGRYHTLLI----SNSSVFSCGSSLCGVLGHGPETTQ-----CVSFTRINFPSAAH 164
           +QI  G  + L +    S  SV+S G  L G LGHG  T +        F  +N      
Sbjct: 302 VQIAAGYCYLLCLACQPSGMSVYSVGCGLGGKLGHGSRTDEEYPRLIEQFGLLNL----Q 357

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
            + V+A   HAA V + G+V T G     C GH +       P++VEAL  V    V  G
Sbjct: 358 PMVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECESV-PKVVEALSNVKAVHVATG 416

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGH------------GDTLDRPTPKSIAPLEEVGS-V 271
              T  ++  G V++ G      LGH               LD   P+ +  L+++   V
Sbjct: 417 DYTTFVVSDDGDVYSFGCGQSASLGHNAAGNDEQGNRHAKVLD---PELVTSLKQINERV 473

Query: 272 VQIAA-----GPSYMLAVTGNGVVYSFGSGSNFCLG 302
           VQI+        ++  A+T +G +Y+FG+G    LG
Sbjct: 474 VQISLTNCNYWNAHTFALTESGKLYAFGAGDKGQLG 509



 Score = 52.0 bits (123), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 66/152 (43%), Gaps = 17/152 (11%)

Query: 207 PRLVE--ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
           PRL+E   L  +    V AG      +   G V T G   +G LGHG+      PK +  
Sbjct: 345 PRLIEQFGLLNLQPMVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECESVPKVVEA 404

Query: 265 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH--------GEQHDE-LQPRAI 315
           L  V   V +A G      V+ +G VYSFG G +  LGH        G +H + L P  +
Sbjct: 405 LSNV-KAVHVATGDYTTFVVSDDGDVYSFGCGQSASLGHNAAGNDEQGNRHAKVLDPELV 463

Query: 316 QTFRRKGIHVVRVSA-----GDEHVVALDSSG 342
            + ++    VV++S       + H  AL  SG
Sbjct: 464 TSLKQINERVVQISLTNCNYWNAHTFALTESG 495


>gi|356567464|ref|XP_003551939.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 535

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 109/343 (31%), Positives = 160/343 (46%), Gaps = 14/343 (4%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCAL 67
           F +   PS ++  +LT+  L   DLA LE T   F       P    SL +LAA  +C  
Sbjct: 48  FPLSANPS-IVLHVLTACNLEPQDLAKLEATCSFFRQPANFAPDLDLSLSELAALDMCQK 106

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLI- 126
            +I+  M+   + +L  RC G+WK  LR+L + E      ++     Q   G  H++ + 
Sbjct: 107 RAIFKPMTTEQRQDLKLRCGGSWKLALRYLMAGEACCRREKS-----QAIAGPGHSIAVT 161

Query: 127 SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 186
           S   V+S GS+  G LGHG  T +      I       ++Q +A       V  SGQV+ 
Sbjct: 162 SKGVVYSFGSNSSGQLGHG-TTDEEWRPRPIRTLQGIRIIQAAAGAGRTMLVSDSGQVYA 220

Query: 187 CGDNSSFCCGHR-DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH 245
            G +S     +    ++ +  P++VE+LK +   Q   G  FT  L+  G V+T    + 
Sbjct: 221 FGKDSFGEAEYGVQGSKTVAAPQIVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGSD 280

Query: 246 GQLG-HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM--LAVTGNGV-VYSFGSGSNFCL 301
           G+LG H D  D      +  LE +  VVQIAAG  Y+  LA   +G+ VYS G G    L
Sbjct: 281 GKLGHHTDQSDVEPHPLLGALENI-PVVQIAAGYCYLLCLACQPSGMSVYSVGCGLGGKL 339

Query: 302 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           GHG + DE  PR I+ F    +  + V+AG  H   +   G V
Sbjct: 340 GHGSRTDEKYPRLIEQFGLLNLQPMVVAAGAWHAAVVGRDGRV 382



 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 93/213 (43%), Gaps = 29/213 (13%)

Query: 114 MQITTGRYHTLLI----SNSSVFSCGSSLCGVLGHGPETTQ-----CVSFTRINFPSAAH 164
           +QI  G  + L +    S  SV+S G  L G LGHG  T +        F  +N      
Sbjct: 307 VQIAAGYCYLLCLACQPSGMSVYSVGCGLGGKLGHGSRTDEKYPRLIEQFGLLNL----Q 362

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
            + V+A   HAA V + G+V T G     C GH +       P++VEAL  V    V  G
Sbjct: 363 PMVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECESV-PKVVEALSNVKAVHVATG 421

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP---------TPKSIAPLEEVGS-VVQI 274
              T  ++  G V++ G      LGH    +           +P+ +  L+++   VVQI
Sbjct: 422 DYTTFVVSDDGDVYSFGCGESASLGHNAAGNDEQGNRHANVLSPELVTSLKQINERVVQI 481

Query: 275 AAGPS-----YMLAVTGNGVVYSFGSGSNFCLG 302
           +   S     +  A+T +G +Y+FG+G    LG
Sbjct: 482 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 514



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 69/253 (27%), Positives = 101/253 (39%), Gaps = 30/253 (11%)

Query: 114 MQITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
           +Q   G + T ++S       FS GS   G LGH  + +       +       VVQ++A
Sbjct: 254 VQAAIGNFFTAVLSREGRVYTFSWGSD--GKLGHHTDQSDVEPHPLLGALENIPVVQIAA 311

Query: 171 SENHA---AFVLQSGQVFT--CGDNSSFCCGHRDTNRPIFRPRLVE--ALKGVPCKQVTA 223
              +    A       V++  CG       G R   +    PRL+E   L  +    V A
Sbjct: 312 GYCYLLCLACQPSGMSVYSVGCGLGGKLGHGSRTDEK---YPRLIEQFGLLNLQPMVVAA 368

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G      +   G V T G   +G LGHG+      PK +  L  V   V +A G      
Sbjct: 369 GAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECESVPKVVEALSNV-KAVHVATGDYTTFV 427

Query: 284 VTGNGVVYSFGSGSNFCLGH--------GEQH-DELQPRAIQTFRRKGIHVVRVSA---- 330
           V+ +G VYSFG G +  LGH        G +H + L P  + + ++    VV++S     
Sbjct: 428 VSDDGDVYSFGCGESASLGHNAAGNDEQGNRHANVLSPELVTSLKQINERVVQISLTNSI 487

Query: 331 -GDEHVVALDSSG 342
             + H  AL  SG
Sbjct: 488 YWNAHTFALTESG 500


>gi|357160277|ref|XP_003578713.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Brachypodium distachyon]
          Length = 534

 Score =  125 bits (313), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 108/350 (30%), Positives = 164/350 (46%), Gaps = 28/350 (8%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCAL 67
           F +   PS ++  +LTS  +   DLAHLE T K F       P     + +LAA  +C  
Sbjct: 49  FPLAANPS-IVLHVLTSCNVEPEDLAHLEATCKFFRKPANFPPDFQLPMSELAALDMCHK 107

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLIS 127
            +I+  M+   +     RC G+WK VLRF+ + E      ++     Q   G  H++ ++
Sbjct: 108 RAIFKHMTTQEREMFKQRCGGSWKLVLRFIMAGEACCRREKS-----QAIAGPGHSIAVT 162

Query: 128 NS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
            S +V++ GS+  G LGH        P   + +   RI        +Q +A       V 
Sbjct: 163 TSGAVYTFGSNNSGQLGHDGLEEEWRPRPIRSLQGIRI--------IQAAAGAGRTMLVS 214

Query: 180 QSGQVFTCGDNSSFCCGHR-DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
            +G+V+  G +S     +    +R +  P++VE+LK +   Q   G  FT  L+  G V+
Sbjct: 215 DAGRVYAFGKDSFGEVEYGVQGSRVVTTPQMVESLKDIYIVQAAIGNFFTAVLSREGCVY 274

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVT--GNGV-VYSFG 294
           T    +  +LGH    +   P  +  PLE +  VVQIAAG  Y+LA+    +G+ VYS G
Sbjct: 275 TFSWGSDMKLGHQTEPNDVQPHLLTGPLENI-PVVQIAAGYCYLLALACQPSGMSVYSVG 333

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            G    LGHG + DE  PR I+ F+   I  V V+AG  H   +   G V
Sbjct: 334 CGLGGKLGHGSRTDEKYPRLIEQFQTLNIQPVVVAAGAWHAAVVSKDGRV 383



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 64/228 (28%), Positives = 100/228 (43%), Gaps = 30/228 (13%)

Query: 114 MQITTGRYHTLLI----SNSSVFSCGSSLCGVLGHGPETTQ-----CVSFTRINFPSAAH 164
           +QI  G  + L +    S  SV+S G  L G LGHG  T +        F  +N      
Sbjct: 308 VQIAAGYCYLLALACQPSGMSVYSVGCGLGGKLGHGSRTDEKYPRLIEQFQTLNI----Q 363

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
            V V+A   HAA V + G+V T G     C GH +       P++VEAL  V    V  G
Sbjct: 364 PVVVAAGAWHAAVVSKDGRVCTWGWGRYGCLGHGNEECESV-PKVVEALGSVKAVHVATG 422

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-------TPKSIAPLEEVGS-VVQIAA 276
              T  ++ +G V++ G      LGH   ++         +P+ +  L+     VVQ++ 
Sbjct: 423 DYTTFVVSDKGDVYSFGCGESSSLGHNTIIEGNNRHSNVLSPELVTSLKRTNERVVQVSL 482

Query: 277 GPS-----YMLAVTGNGVVYSFGSGSNFCLGH---GEQHDELQPRAIQ 316
             S     +  A+T +G +Y+FG+G    LG     +Q++   P  ++
Sbjct: 483 TNSIYWNAHTFALTESGKLYAFGAGDKGQLGTELVAQQNERGAPERVE 530



 Score = 57.4 bits (137), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 78/275 (28%), Positives = 109/275 (39%), Gaps = 37/275 (13%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPET 148
           RV+   Q VE   DI       +Q   G + T ++S       FS GS +   LGH  E 
Sbjct: 238 RVVTTPQMVESLKDIY-----IVQAAIGNFFTAVLSREGCVYTFSWGSDM--KLGHQTEP 290

Query: 149 TQCVSFTRINFPSAAHVVQVSASENHA-AFVLQSG--QVFT--CGDNSSFCCGHRDTNRP 203
                           VVQ++A   +  A   Q     V++  CG       G R   + 
Sbjct: 291 NDVQPHLLTGPLENIPVVQIAAGYCYLLALACQPSGMSVYSVGCGLGGKLGHGSRTDEK- 349

Query: 204 IFRPRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 261
              PRL+E  + +  + V   AG      ++  G V T G   +G LGHG+      PK 
Sbjct: 350 --YPRLIEQFQTLNIQPVVVAAGAWHAAVVSKDGRVCTWGWGRYGCLGHGNEECESVPKV 407

Query: 262 IAPLEEVGSV--VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-------GEQHDELQP 312
           +   E +GSV  V +A G      V+  G VYSFG G +  LGH           + L P
Sbjct: 408 V---EALGSVKAVHVATGDYTTFVVSDKGDVYSFGCGESSSLGHNTIIEGNNRHSNVLSP 464

Query: 313 RAIQTFRRKGIHVVRVSA-----GDEHVVALDSSG 342
             + + +R    VV+VS       + H  AL  SG
Sbjct: 465 ELVTSLKRTNERVVQVSLTNSIYWNAHTFALTESG 499


>gi|224135099|ref|XP_002321983.1| predicted protein [Populus trichocarpa]
 gi|222868979|gb|EEF06110.1| predicted protein [Populus trichocarpa]
          Length = 538

 Score =  125 bits (313), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 108/347 (31%), Positives = 161/347 (46%), Gaps = 18/347 (5%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKT----FGGSHGLYPQKFRSLVDLAASQ 63
           F +   PS ++  +LT+  L   DLA LE  S      F       P    S+ +LAA  
Sbjct: 48  FPLAANPS-IVLHVLTTCNLDPQDLAKLEAKSIATCSFFRQPASFAPDYELSMSELAALD 106

Query: 64  LCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHT 123
           +C   +I+  M+   + +L  RC G+WK VLRFL + E       +     Q   G  H+
Sbjct: 107 MCQKRAIFKPMTPEERQDLKQRCGGSWKLVLRFLLAGEACCRRERS-----QAIAGPGHS 161

Query: 124 LLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSG 182
           + + SN   +S GS+  G LGHG  T +     +I       ++Q +A       +  +G
Sbjct: 162 IAVTSNGVAYSFGSNSSGQLGHG-TTEEEWRPRQIRSLQGIRIIQAAAGPGRTMLISDAG 220

Query: 183 QVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           +V+  G +S      G + T + +  P+LVE+LK +   Q   G  FT  L+  G V+T 
Sbjct: 221 EVYAFGKDSFGEAEYGVQGT-KTVTTPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 279

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT--GNGV-VYSFGSGS 297
                G+LGH    +   P  +    E   VVQIAAG  Y+LA+    +G+ VYS G G 
Sbjct: 280 SWGNDGKLGHQTEPNDVVPHPLLGALENIPVVQIAAGYCYLLALACQPSGMSVYSVGCGL 339

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              LGHG + DE  PR I+ F+   +  + V+AG  H   +   G V
Sbjct: 340 GGKLGHGSRTDEKYPRLIEQFQLLNLQPMVVAAGAWHAAVVGRDGRV 386



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 70/252 (27%), Positives = 103/252 (40%), Gaps = 29/252 (11%)

Query: 114 MQITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
           +Q   G + T ++S       FS G+   G LGH  E    V    +       VVQ++A
Sbjct: 258 VQAAIGNFFTAVLSREGRVYTFSWGND--GKLGHQTEPNDVVPHPLLGALENIPVVQIAA 315

Query: 171 SENHA-AFVLQSG--QVFT--CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ--VTA 223
              +  A   Q     V++  CG       G R   +    PRL+E  + +  +   V A
Sbjct: 316 GYCYLLALACQPSGMSVYSVGCGLGGKLGHGSRTDEK---YPRLIEQFQLLNLQPMVVAA 372

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G      +   G V T G   +G LGHG+      PK +  L +V   V +A G      
Sbjct: 373 GAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECESVPKVVDALSKV-KAVHVATGDYTTFV 431

Query: 284 VTGNGVVYSFGSGSNFCLGH-------GEQH-DELQPRAIQTFRRKGIHVVRVSA----- 330
           V+ +G VYSFG G +  LGH       G +H + L P  + + +     VV++S      
Sbjct: 432 VSDDGDVYSFGCGESASLGHNGDGDGQGNRHTNVLSPELVTSLKEVKERVVQISLTNSVY 491

Query: 331 GDEHVVALDSSG 342
            + H  AL  SG
Sbjct: 492 WNAHTFALTESG 503


>gi|356525413|ref|XP_003531319.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like isoform
           2 [Glycine max]
          Length = 535

 Score =  124 bits (312), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 110/347 (31%), Positives = 163/347 (46%), Gaps = 24/347 (6%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCAL 67
           F +   PS ++  +LT+  L   DLA LE +++         P    SL +LAA  +C  
Sbjct: 51  FPLSANPS-IVLHVLTTCNLYPQDLAKLEASAQ----PANFAPDFDLSLSELAALDMCQK 105

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLI- 126
            +I+  M+   +  L  RC G+WK VLRFL + E      E S    Q+  G  H++ + 
Sbjct: 106 RAIFKPMTTEQRQHLKQRCGGSWKLVLRFLLAGEACCRRREKS----QVIAGPGHSIAVT 161

Query: 127 SNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAFVLQSGQVF 185
           S   V+S GS+  G LGHG  TT+ V   R I       ++Q +A       +  SGQ +
Sbjct: 162 SKGVVYSFGSNSSGQLGHG--TTEDVWQPRPIRALQGIRIIQATAMTGRTMLISDSGQAY 219

Query: 186 TCGDNSSFCCGHRDT-----NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
             G  S    G  +T     ++ +  P+LVE+LK +   Q   G  FT  L+  G V+T 
Sbjct: 220 VFGKES---FGEVETIVNRGSKIVTTPQLVESLKNIFVVQAAMGNYFTAVLSREGRVYTF 276

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM--LAVTGNGV-VYSFGSGS 297
                G+L H    +   P+ +    E   VVQIAAG  Y+  LA   +G+ VYS G G 
Sbjct: 277 SWGCVGKLCHQTDQNDVEPRPLLGALEHIPVVQIAAGFCYLLCLACQPSGMSVYSVGCGL 336

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              LGHG + +E  PR I+ F+   +  + ++AG  H   +   G V
Sbjct: 337 GGKLGHGTKTNEEYPRLIEQFQLLNLQPMAIAAGSWHAAVVGQDGRV 383



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 78/271 (28%), Positives = 123/271 (45%), Gaps = 37/271 (13%)

Query: 90  WK-RVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCG----VLG 143
           W+ R +R LQ +     I++ +A      TGR  T+LIS+S   +  G    G    ++ 
Sbjct: 186 WQPRPIRALQGIR----IIQATA-----MTGR--TMLISDSGQAYVFGKESFGEVETIVN 234

Query: 144 HGPE---TTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH--R 198
            G +   T Q V   +  F     VVQ +      A + + G+V+T    S  C G    
Sbjct: 235 RGSKIVTTPQLVESLKNIF-----VVQAAMGNYFTAVLSREGRVYTF---SWGCVGKLCH 286

Query: 199 DTNRPIFRPR-LVEALKGVPCKQVTAGLNFTGFLTIRGH---VHTCGSNTHGQLGHGDTL 254
            T++    PR L+ AL+ +P  Q+ AG  +   L  +     V++ G    G+LGHG   
Sbjct: 287 QTDQNDVEPRPLLGALEHIPVVQIAAGFCYLLCLACQPSGMSVYSVGCGLGGKLGHGTKT 346

Query: 255 DRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPR 313
           +   P+ I   + +    + IAAG  +   V  +G V ++G GS  CLGHG +  EL P+
Sbjct: 347 NEEYPRLIEQFQLLNLQPMAIAAGSWHAAVVGQDGRVCTWGWGSYGCLGHGNEECELVPK 406

Query: 314 AIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            ++  R   +  V V+ GD     +  SG V
Sbjct: 407 VVEELRN--VKAVHVATGDFTTFVVSDSGDV 435



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 67/213 (31%), Positives = 101/213 (47%), Gaps = 30/213 (14%)

Query: 114 MQITTGRYHTLLI----SNSSVFSCGSSLCGVLGHGPETTQ-----CVSFTRINFPSAAH 164
           +QI  G  + L +    S  SV+S G  L G LGHG +T +        F  +N    A 
Sbjct: 308 VQIAAGFCYLLCLACQPSGMSVYSVGCGLGGKLGHGTKTNEEYPRLIEQFQLLNLQPMA- 366

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
              ++A   HAA V Q G+V T G  S  C GH +    +  P++VE L+ V    V  G
Sbjct: 367 ---IAAGSWHAAVVGQDGRVCTWGWGSYGCLGHGNEECELV-PKVVEELRNVKAVHVATG 422

Query: 225 LNFTGFL-TIRGHVHTCGSNTHGQLGH-------GDTLDRP-TPKSIAPLEEVGS-VVQI 274
            +FT F+ +  G V++ G    G LGH        D  +   TPK +  ++++   VVQI
Sbjct: 423 -DFTTFVVSDSGDVYSFGYGESGSLGHVPENHEQEDMHENVLTPKLVTWMKQINERVVQI 481

Query: 275 AA-----GPSYMLAVTGNGVVYSFGSGSNFCLG 302
           +        ++  A+T +G +Y+FG+G    LG
Sbjct: 482 SLTNFIYWNAHTFALTESGKLYAFGAGDKGQLG 514



 Score = 51.6 bits (122), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 67/151 (44%), Gaps = 16/151 (10%)

Query: 207 PRLVEALK--GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
           PRL+E  +   +    + AG      +   G V T G  ++G LGHG+      PK +  
Sbjct: 351 PRLIEQFQLLNLQPMAIAAGSWHAAVVGQDGRVCTWGWGSYGCLGHGNEECELVPKVVEE 410

Query: 265 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDE-------LQPRAIQ 316
           L  V   V +A G      V+ +G VYSFG G +  LGH  E H++       L P+ + 
Sbjct: 411 LRNV-KAVHVATGDFTTFVVSDSGDVYSFGYGESGSLGHVPENHEQEDMHENVLTPKLVT 469

Query: 317 TFRRKGIHVVRVSA-----GDEHVVALDSSG 342
             ++    VV++S       + H  AL  SG
Sbjct: 470 WMKQINERVVQISLTNFIYWNAHTFALTESG 500


>gi|242065672|ref|XP_002454125.1| hypothetical protein SORBIDRAFT_04g024990 [Sorghum bicolor]
 gi|241933956|gb|EES07101.1| hypothetical protein SORBIDRAFT_04g024990 [Sorghum bicolor]
          Length = 535

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 105/345 (30%), Positives = 161/345 (46%), Gaps = 23/345 (6%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCAL 67
           F +   PS ++  +L++  L   DLA+LE T   F       P    SL +LAA  +C  
Sbjct: 52  FPLAVSPS-IVLHVLSACDLDPKDLANLEATCTFFSKPANFAPNFALSLPELAAFDMCQK 110

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLI- 126
            +++  M +  Q  L  RC G+WK VL+++        +V    G+ ++  G  H+++I 
Sbjct: 111 RTMFKLMKQEDQECLKQRCGGSWKHVLKYI--------LVREKNGS-RVIAGPGHSIVIS 161

Query: 127 SNSSVFSCGSSLCGVLGHGPETTQ---CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 183
           SN  V+S G++  G LG G    +   C+    I       + Q +        V  +G 
Sbjct: 162 SNGDVYSFGANCSGQLGLGDSEDRFRPCI----IRSLQGIRITQAAVGSRWTMLVSDTGS 217

Query: 184 VFTCG-DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
           V+  G DN        D +  I  P++VE+LKGV   Q   G  F+  L+  G V+T   
Sbjct: 218 VYAFGKDNFRGAEVVDDAHIQITTPKIVESLKGVFVVQAAIGGYFSAVLSREGRVYTFSW 277

Query: 243 NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY--MLAVTGNGV-VYSFGSGSNF 299
               +LGH        P+ ++ LE+V  V  I+AG  Y  MLA   NG+ VYS G G   
Sbjct: 278 GKEERLGHSSDPSDVEPRLLSGLEDV-PVAYISAGNCYLLMLAYQPNGMSVYSVGCGLGG 336

Query: 300 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            LGHG + ++  P+ I+ F+      V ++AG  H  AL + G V
Sbjct: 337 KLGHGCKTNKGMPKLIEQFQSLSFKPVSIAAGTWHAAALGADGRV 381



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 57/129 (44%), Gaps = 7/129 (5%)

Query: 207 PRLVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
           P+L+E  + +  K V+  AG      L   G V T G    G LGHGD   +  P  +  
Sbjct: 349 PKLIEQFQSLSFKPVSIAAGTWHAAALGADGRVCTWGWGHTGCLGHGDEEYKAVPTLVEG 408

Query: 265 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE----LQPRAIQTFRR 320
           L +V   V ++ G      V  NG VYSFGSG +      ++ +E      P  + + + 
Sbjct: 409 LRDV-KAVHLSTGEYTTFVVAENGDVYSFGSGESLVFQEDDEAEEGPDFSTPSIVSSLKA 467

Query: 321 KGIHVVRVS 329
               VV++S
Sbjct: 468 LNKKVVQIS 476


>gi|147784312|emb|CAN77314.1| hypothetical protein VITISV_008041 [Vitis vinifera]
          Length = 541

 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 108/345 (31%), Positives = 160/345 (46%), Gaps = 16/345 (4%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLEL--TSKTFGGSHGLYPQKFRSLVDLAASQLC 65
           F +   PS ++  +LT+  L   DLA LE   T   F       P    S+ +LAA  +C
Sbjct: 48  FPLAANPS-IVLHVLTACNLEPQDLAKLEASATCSFFRQPAHFAPDFELSISELAALDMC 106

Query: 66  ALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLL 125
              +I+  M    +  L  RC G+WK VLRFL + E      ++     Q   G  H++ 
Sbjct: 107 LKRAIFRPMXLEEREVLKQRCGGSWKLVLRFLLAGEACCRREKS-----QAIAGPGHSIA 161

Query: 126 IS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           ++   +V+S GS+  G LGHG  T +     +I       ++Q +A       +  +GQV
Sbjct: 162 VTVKGAVYSFGSNSSGQLGHG-TTDEEWRPRQIRSLEGIRIIQAAAGAGRTMLISDAGQV 220

Query: 185 FTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
           +  G +S      G + T + +  P+LVE+LK +   Q   G  FT  L+  G V+T   
Sbjct: 221 YAFGKDSFGEAEYGVQGT-KLVTTPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 279

Query: 243 NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT--GNGV-VYSFGSGSNF 299
               +LGH    +   P  +    E   VVQIAAG  Y+LA+    NG+ VYS G G   
Sbjct: 280 GNDAKLGHQTEANDLEPHPLLGALENIPVVQIAAGYCYLLALACQPNGMSVYSVGCGLGG 339

Query: 300 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            LGHG + DE  PR I+ F+   +  + V+AG  H   +   G V
Sbjct: 340 KLGHGTRTDEKHPRLIEQFQILNLQPMVVAAGAWHAAVVGRDGRV 384



 Score = 55.1 bits (131), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 61/212 (28%), Positives = 93/212 (43%), Gaps = 28/212 (13%)

Query: 114 MQITTGRYHTLLIS----NSSVFSCGSSLCGVLGHGPETTQ-----CVSFTRINFPSAAH 164
           +QI  G  + L ++      SV+S G  L G LGHG  T +        F  +N      
Sbjct: 309 VQIAAGYCYLLALACQPNGMSVYSVGCGLGGKLGHGTRTDEKHPRLIEQFQILNL----Q 364

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
            + V+A   HAA V + G+V T G     C GH +       P++VEAL  V    V  G
Sbjct: 365 PMVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECESV-PKVVEALINVKAVHVATG 423

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP--------TPKSIAPLEEVGS-VVQIA 275
              T  ++  G V++ G      LGH +  D          +P+ +  L+++   +VQI+
Sbjct: 424 DYTTFVVSDDGDVYSFGCGESSSLGHNNGPDGQGNRHANILSPELVTSLKQIKERMVQIS 483

Query: 276 AGPS-----YMLAVTGNGVVYSFGSGSNFCLG 302
              S     +  A+T  G +Y+FG+G    LG
Sbjct: 484 LTNSIYWNAHTFALTETGKLYAFGAGDKGQLG 515



 Score = 48.5 bits (114), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 66/252 (26%), Positives = 101/252 (40%), Gaps = 29/252 (11%)

Query: 114 MQITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
           +Q   G + T ++S       FS G+     LGH  E         +       VVQ++A
Sbjct: 256 VQAAIGNFFTAVLSREGRVYTFSWGND--AKLGHQTEANDLEPHPLLGALENIPVVQIAA 313

Query: 171 SENHA-AFVLQSG--QVFT--CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ--VTA 223
              +  A   Q     V++  CG       G R   +    PRL+E  + +  +   V A
Sbjct: 314 GYCYLLALACQPNGMSVYSVGCGLGGKLGHGTRTDEK---HPRLIEQFQILNLQPMVVAA 370

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G      +   G V T G   +G LGHG+      PK +  L  V   V +A G      
Sbjct: 371 GAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECESVPKVVEALINV-KAVHVATGDYTTFV 429

Query: 284 VTGNGVVYSFGSGSNFCLGH-------GEQH-DELQPRAIQTFRRKGIHVVRVSA----- 330
           V+ +G VYSFG G +  LGH       G +H + L P  + + ++    +V++S      
Sbjct: 430 VSDDGDVYSFGCGESSSLGHNNGPDGQGNRHANILSPELVTSLKQIKERMVQISLTNSIY 489

Query: 331 GDEHVVALDSSG 342
            + H  AL  +G
Sbjct: 490 WNAHTFALTETG 501


>gi|302812094|ref|XP_002987735.1| hypothetical protein SELMODRAFT_426505 [Selaginella moellendorffii]
 gi|300144627|gb|EFJ11310.1| hypothetical protein SELMODRAFT_426505 [Selaginella moellendorffii]
          Length = 539

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 100/327 (30%), Positives = 151/327 (46%), Gaps = 32/327 (9%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCAL 67
           F +   PS ++  +LT   L   DLA LE T   F  +    P    SL +LAA  +C  
Sbjct: 52  FPLATNPS-IVLHVLTECCLDPQDLARLEATCSFFRHAANFTPDVTLSLSELAALDMCKR 110

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLIS 127
            +I+  M+   +  L   C G+WK VLRFL++ E     +      +Q   G  H+++++
Sbjct: 111 RAIFRPMTSEERESLKESCGGSWKLVLRFLKAGE-----LCYRREKIQAIAGPGHSIVVT 165

Query: 128 NS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
            + +V++ GSS  G LGHG       P   + +   RI        +Q +A       + 
Sbjct: 166 KTGAVYTFGSSSSGQLGHGSLDEEWRPRLLRSLQGVRI--------IQATAGVGRTMLIS 217

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRP----IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 235
            +G+V+  G +S    G  +   P    I  P++VE+L G+   Q   G  FT  L+  G
Sbjct: 218 DTGRVYAFGKDS---FGDPEYGGPGSKNINTPQIVESLNGIFVVQAAIGNFFTAVLSREG 274

Query: 236 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG---VVYS 292
            V+T       +LGH    +   P+ +    E   VVQIAAG  Y+LA+T       VYS
Sbjct: 275 RVYTFSWGADAKLGHQTEPEDQKPQLLRGALENKPVVQIAAGYCYLLALTCQSTGMAVYS 334

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFR 319
            G G    LGHG + DE  P+ I+ F+
Sbjct: 335 VGCGLGGKLGHGTRSDERWPKMIEHFQ 361



 Score = 43.9 bits (102), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 60/209 (28%), Positives = 96/209 (45%), Gaps = 21/209 (10%)

Query: 114 MQITTGRYHTLLISNSS----VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA-HVVQV 168
           +QI  G  + L ++  S    V+S G  L G LGHG  + +       +F       + V
Sbjct: 311 VQIAAGYCYLLALTCQSTGMAVYSVGCGLGGKLGHGTRSDERWPKMIEHFQHLRLQPIAV 370

Query: 169 SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
           +A   HAA V + G+V T G     C GH + +  +  P++VE+L+GV    V  G   T
Sbjct: 371 AAGAWHAAVVSEDGRVCTWGWGRYGCLGHGNEDCELL-PKVVESLQGVKAVHVATGDYTT 429

Query: 229 GFLTIRGHVHTCGSNTHGQLGH--GDTLDRPT-------PKSIAPLEEVG-SVVQIAAGP 278
             +T  G V +CG      LGH  G T  +         P+ ++ L++    V+QI+   
Sbjct: 430 FVVTDAGEVFSCGCGESSSLGHLSGATEGQANRHANVLRPELVSSLKQRNEKVLQISLTN 489

Query: 279 S-----YMLAVTGNGVVYSFGSGSNFCLG 302
           S     +  A+  +G +++FG+G    LG
Sbjct: 490 SVTWNAHTFALCDSGRLFAFGAGDKGQLG 518



 Score = 41.2 bits (95), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 53/122 (43%), Gaps = 15/122 (12%)

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G V T G   +G LGHG+      PK +  L+ V   V +A G      VT  G V+S G
Sbjct: 384 GRVCTWGWGRYGCLGHGNEDCELLPKVVESLQGV-KAVHVATGDYTTFVVTDAGEVFSCG 442

Query: 295 SGSNFCLGHGEQHDE---------LQPRAIQTFRRKGIHVVRVS-----AGDEHVVALDS 340
            G +  LGH     E         L+P  + + +++   V+++S       + H  AL  
Sbjct: 443 CGESSSLGHLSGATEGQANRHANVLRPELVSSLKQRNEKVLQISLTNSVTWNAHTFALCD 502

Query: 341 SG 342
           SG
Sbjct: 503 SG 504


>gi|302811669|ref|XP_002987523.1| hypothetical protein SELMODRAFT_126315 [Selaginella moellendorffii]
 gi|300144677|gb|EFJ11359.1| hypothetical protein SELMODRAFT_126315 [Selaginella moellendorffii]
          Length = 508

 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 100/327 (30%), Positives = 151/327 (46%), Gaps = 32/327 (9%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCAL 67
           F +   PS ++  +LT   L   DLA LE T   F  +    P    SL +LAA  +C  
Sbjct: 21  FPLATNPS-IVLHVLTECCLDPQDLARLEATCSFFRHAANFTPDVTLSLSELAALDMCKR 79

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLIS 127
            +I+  M+   +  L   C G+WK VLRFL++ E     +      +Q   G  H+++++
Sbjct: 80  RAIFRPMTSEERESLKESCGGSWKLVLRFLKAGE-----LCYRREKIQAIAGPGHSIVVT 134

Query: 128 NS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
            + +V++ GSS  G LGHG       P   + +   RI        +Q +A       + 
Sbjct: 135 KTGAVYTFGSSSSGQLGHGSLDEEWRPRLLRSLQGVRI--------IQATAGVGRTMLIS 186

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRP----IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 235
            +G+V+  G +S    G  +   P    I  P++VE+L G+   Q   G  FT  L+  G
Sbjct: 187 DTGRVYAFGKDS---FGDPEYGGPGSKNINTPQIVESLNGIFVVQAAIGNFFTAVLSREG 243

Query: 236 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG---VVYS 292
            V+T       +LGH    +   P+ +    E   VVQIAAG  Y+LA+T       VYS
Sbjct: 244 RVYTFSWGADAKLGHQTEPEDQKPQLLRGALENKPVVQIAAGYCYLLALTCQSTGMAVYS 303

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFR 319
            G G    LGHG + DE  P+ I+ F+
Sbjct: 304 VGCGLGGKLGHGTRSDERWPKMIEHFQ 330



 Score = 44.3 bits (103), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 60/209 (28%), Positives = 96/209 (45%), Gaps = 21/209 (10%)

Query: 114 MQITTGRYHTLLISNSS----VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA-HVVQV 168
           +QI  G  + L ++  S    V+S G  L G LGHG  + +       +F       + V
Sbjct: 280 VQIAAGYCYLLALTCQSTGMAVYSVGCGLGGKLGHGTRSDERWPKMIEHFQHLRLQPIAV 339

Query: 169 SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
           +A   HAA V + G+V T G     C GH + +  +  P++VE+L+GV    V  G   T
Sbjct: 340 AAGAWHAAVVSEDGRVCTWGWGRYGCLGHGNEDCELL-PKVVESLQGVKAVHVATGDYTT 398

Query: 229 GFLTIRGHVHTCGSNTHGQLGH--GDTLDRPT-------PKSIAPLEEVG-SVVQIAAGP 278
             +T  G V +CG      LGH  G T  +         P+ ++ L++    V+QI+   
Sbjct: 399 FVVTDAGEVFSCGCGESSSLGHLSGATEGQANRHANVLRPELVSSLKQRNEKVLQISLTN 458

Query: 279 S-----YMLAVTGNGVVYSFGSGSNFCLG 302
           S     +  A+  +G +++FG+G    LG
Sbjct: 459 SVTWNAHTFALCDSGRLFAFGAGDKGQLG 487



 Score = 41.6 bits (96), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 53/122 (43%), Gaps = 15/122 (12%)

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G V T G   +G LGHG+      PK +  L+ V   V +A G      VT  G V+S G
Sbjct: 353 GRVCTWGWGRYGCLGHGNEDCELLPKVVESLQGV-KAVHVATGDYTTFVVTDAGEVFSCG 411

Query: 295 SGSNFCLGH---------GEQHDELQPRAIQTFRRKGIHVVRVS-----AGDEHVVALDS 340
            G +  LGH             + L+P  + + +++   V+++S       + H  AL  
Sbjct: 412 CGESSSLGHLSGATEGQANRHANVLRPELVSSLKQRNEKVLQISLTNSVTWNAHTFALCD 471

Query: 341 SG 342
           SG
Sbjct: 472 SG 473


>gi|226501958|ref|NP_001145799.1| uncharacterized protein LOC100279306 [Zea mays]
 gi|194702102|gb|ACF85135.1| unknown [Zea mays]
 gi|194704788|gb|ACF86478.1| unknown [Zea mays]
 gi|195621478|gb|ACG32569.1| HECT domain and RCC1-like domain-containing protein 2 [Zea mays]
 gi|219884475|gb|ACL52612.1| unknown [Zea mays]
 gi|223949899|gb|ACN29033.1| unknown [Zea mays]
 gi|224030775|gb|ACN34463.1| unknown [Zea mays]
 gi|413922916|gb|AFW62848.1| putative regulator of chromosome condensation (RCC1) family protein
           isoform 1 [Zea mays]
 gi|413922917|gb|AFW62849.1| putative regulator of chromosome condensation (RCC1) family protein
           isoform 2 [Zea mays]
 gi|413922918|gb|AFW62850.1| putative regulator of chromosome condensation (RCC1) family protein
           isoform 3 [Zea mays]
          Length = 535

 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 104/344 (30%), Positives = 154/344 (44%), Gaps = 21/344 (6%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCAL 67
           F +   PS ++  +L+S  L   DLA+LE T   FG      P    SL +LAA  +C  
Sbjct: 52  FPLAVSPS-IVLHVLSSCDLGPKDLANLEATCVFFGKPASFAPDFALSLPELAAFDMCQK 110

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLIS 127
            +++  M +  Q  L  RC G+WK VL ++        +V    G+  I    +  ++ S
Sbjct: 111 RTMFKQMKQEDQECLKQRCGGSWKHVLGYI--------LVREKNGSRVIAGPGHSIIITS 162

Query: 128 NSSVFSCGSSLCGVLGHGPETTQ---CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           N  V+S G++  G LG G    +   CV    I       + Q +        V  +G V
Sbjct: 163 NGDVYSFGANCSGQLGLGDSEDRFKPCV----IRSLQGIRITQAAVGSRCTMLVSDTGSV 218

Query: 185 FTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           ++ G          D  +  I  PR+ E+LKGV   Q   G  F+  L+  G V+T    
Sbjct: 219 YSFGKEDFRVAELVDGAHFQITTPRIEESLKGVFVVQAAIGGYFSAVLSREGRVYTFSWG 278

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY--MLAVTGNGV-VYSFGSGSNFC 300
              +LGH        P+ +  LE+V  V  I+AG  Y  MLA   NG+ VYS G G    
Sbjct: 279 KAERLGHSSDPSDVEPRLLPGLEDV-PVAYISAGNCYLLMLAYQPNGMSVYSVGCGLGGK 337

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           LGHG + +   P+ ++ F+      V ++AG  H VAL + G V
Sbjct: 338 LGHGCKTNNGMPKLVEQFQSMSFKPVSIAAGTWHAVALGADGRV 381



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 56/129 (43%), Gaps = 7/129 (5%)

Query: 207 PRLVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
           P+LVE  + +  K V+  AG      L   G V T G    G LGHGD   R  P  +  
Sbjct: 349 PKLVEQFQSMSFKPVSIAAGTWHAVALGADGRVCTWGWGHTGCLGHGDEECRAVPTVVEG 408

Query: 265 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG----HGEQHDELQPRAIQTFRR 320
           L +V   V ++ G      V  NG VYSFGSG +          E+ D   P  + + + 
Sbjct: 409 LRDV-KAVHVSTGEYTTFVVAENGDVYSFGSGESLAFQLDDEAEEEPDSSTPSIVSSLKD 467

Query: 321 KGIHVVRVS 329
               VV++S
Sbjct: 468 LNKKVVQIS 476


>gi|242076270|ref|XP_002448071.1| hypothetical protein SORBIDRAFT_06g020490 [Sorghum bicolor]
 gi|241939254|gb|EES12399.1| hypothetical protein SORBIDRAFT_06g020490 [Sorghum bicolor]
          Length = 529

 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 107/346 (30%), Positives = 153/346 (44%), Gaps = 20/346 (5%)

Query: 9   SIEELP----SHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQL 64
           S++++P      L+  +L+S  L   DLA LE+  + F       P    SL +LAA   
Sbjct: 35  SLQQIPLTSNPSLLLHVLSSYGLEPKDLAALEVACQFFRRPAKFEPDATLSLPELAAYDT 94

Query: 65  CALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTL 124
           C   +I+  M +  +  L  RC G+WK VL +L   E +        G  ++  G  HT+
Sbjct: 95  CCQKAIFKSMEQKEKDSLKQRCGGSWKLVLTYLLVGEKN-----YHRGKSRVVAGPGHTI 149

Query: 125 LI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 183
            + S   V+S G++  G LG G    QC     I       + Q +        V  +G 
Sbjct: 150 AVTSKGDVYSFGANSSGQLGLGNTEEQCKP-CLIRSLQGIRITQAAVGSRRTMLVSDTGS 208

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           V+  G +     G          P++VE+LKG+   Q + G +F+  L+  G V+T    
Sbjct: 209 VYVFGQD--IFAGLEFAGDYTSSPKVVESLKGIFVVQASVGGHFSAVLSREGQVYTFCWG 266

Query: 244 THGQLG-HGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSY--MLAVTGNGV-VYSFGSGSN 298
              +LG H D  D  P   S+ P + +  V+QIAAG  Y  ML     G+ VYS G G  
Sbjct: 267 HDARLGHHSDPTDLEPRLLSVPPKDAL--VMQIAAGNCYLLMLVYQPTGMSVYSVGCGEG 324

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             LGHG       PR IQ F+   +  V VSAG  H   L S G V
Sbjct: 325 GKLGHGCTISLTIPRMIQQFKTLKVKPVSVSAGAFHCAVLASDGRV 370



 Score = 54.7 bits (130), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 62/214 (28%), Positives = 88/214 (41%), Gaps = 25/214 (11%)

Query: 114 MQITTGRYHTLLI----SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS-AAHVVQV 168
           MQI  G  + L++    +  SV+S G    G LGHG   +  +      F +     V V
Sbjct: 295 MQIAAGNCYLLMLVYQPTGMSVYSVGCGEGGKLGHGCTISLTIPRMIQQFKTLKVKPVSV 354

Query: 169 SASENHAAFVLQSGQVFTCG-DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
           SA   H A +   G+VFT G D+ + C GH D    +  P  V  L  V    ++ G   
Sbjct: 355 SAGAFHCAVLASDGRVFTWGWDSDTGCLGHDDKQEYVVLPTAVAGLGSVKATYISTGYCS 414

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEV--GSVVQIAAGPSY--- 280
           T  +T  G V++ G +    LG    +  D   PK  A L       VVQI+A  ++   
Sbjct: 415 TFVVTDNGDVYSFGCDHSRNLGVKADVGEDVRIPKLAANLNVSLNEKVVQISATNTWDWP 474

Query: 281 ------------MLAVTGNGVVYSFGSGSNFCLG 302
                          +T +G +YS G GS   LG
Sbjct: 475 SRSQNRITSECHTCVLTESGRLYSLGRGSEGQLG 508


>gi|325183095|emb|CCA17552.1| regulator of chromosome condensation (RCC1)like protein putative
           [Albugo laibachii Nc14]
          Length = 545

 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 77/226 (34%), Positives = 125/226 (55%), Gaps = 7/226 (3%)

Query: 115 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+  G  HT+ L+ N  V++ G    GV GHG  +    S   ++     ++ Q+SA   
Sbjct: 142 QVACGSRHTVVLLENQDVYTWGDKENGVSGHGDTSGHQYSPYCVSELVEINIKQISACGF 201

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHR-DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           H A + ++GQVFT G+      GH  + N+P+   + ++AL G   KQV  G   T  +T
Sbjct: 202 HTAALSENGQVFTFGEGKFGRLGHNSERNQPV--AKCIDALIGKRIKQVACGGFHTAAVT 259

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             GHV T G   HGQLGHGD +++  P  +  L +  +++Q+  G S+ +A+T  G V++
Sbjct: 260 ESGHVFTWGGGEHGQLGHGDKVNQIIPTRVESLID-KNIIQLTCGWSHTVALTDKGEVFT 318

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           +G+G +  LGH + +   +P+ I+TF  K   V+ V++ +EH VAL
Sbjct: 319 WGNGDHGKLGHNDTNKVTEPKLIETFNSK--RVISVASYNEHTVAL 362



 Score =  105 bits (262), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 77/264 (29%), Positives = 127/264 (48%), Gaps = 15/264 (5%)

Query: 83  LNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGV 141
           L   +  WK V R ++ +              Q+T G YHT  ++ S  +++ G  + G 
Sbjct: 66  LGHGDNGWKFVPRLVEDLRDKK--------VRQVTCGSYHTAAVTVSGELYTWGGGMYGK 117

Query: 142 LGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN 201
           LGHG E       + +      +V QV+    H   +L++  V+T GD  +   GH DT+
Sbjct: 118 LGHGNENGHSTP-SLVESIKGLYVRQVACGSRHTVVLLENQDVYTWGDKENGVSGHGDTS 176

Query: 202 RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 261
              + P  V  L  +  KQ++A    T  L+  G V T G    G+LGH    ++P  K 
Sbjct: 177 GHQYSPYCVSELVEINIKQISACGFHTAALSENGQVFTFGEGKFGRLGHNSERNQPVAKC 236

Query: 262 IAPLEEVGS-VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR 320
           I  L  +G  + Q+A G  +  AVT +G V+++G G +  LGHG++ +++ P  +++   
Sbjct: 237 IDAL--IGKRIKQVACGGFHTAAVTESGHVFTWGGGEHGQLGHGDKVNQIIPTRVESLID 294

Query: 321 KGIHVVRVSAGDEHVVALDSSGYV 344
           K I  ++++ G  H VAL   G V
Sbjct: 295 KNI--IQLTCGWSHTVALTDKGEV 316



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/216 (29%), Positives = 99/216 (45%), Gaps = 6/216 (2%)

Query: 130 SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 189
           +V++ G    G LG G  + Q      +        VQ+S    H   +   G+V+T G 
Sbjct: 2   TVYTWGRGEDGQLGLGDTSDQYHPIL-VEALQDRQTVQISCGSGHTVVLTDDGKVYTWGR 60

Query: 190 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
                 GH D N   F PRLVE L+    +QVT G   T  +T+ G ++T G   +G+LG
Sbjct: 61  GDDGRLGHGD-NGWKFVPRLVEDLRDKKVRQVTCGSYHTAAVTVSGELYTWGGGMYGKLG 119

Query: 250 HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD- 308
           HG+     TP  +  ++ +  V Q+A G  + + +  N  VY++G   N   GHG+    
Sbjct: 120 HGNENGHSTPSLVESIKGL-YVRQVACGSRHTVVLLENQDVYTWGDKENGVSGHGDTSGH 178

Query: 309 ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           +  P  +       I++ ++SA   H  AL  +G V
Sbjct: 179 QYSPYCVSELVE--INIKQISACGFHTAALSENGQV 212


>gi|77554672|gb|ABA97468.1| regulator of chromosome condensation, putative, expressed [Oryza
           sativa Japonica Group]
 gi|77554673|gb|ABA97469.1| regulator of chromosome condensation, putative, expressed [Oryza
           sativa Japonica Group]
 gi|108862485|gb|ABG21962.1| regulator of chromosome condensation, putative, expressed [Oryza
           sativa Japonica Group]
 gi|108862486|gb|ABG21963.1| regulator of chromosome condensation, putative, expressed [Oryza
           sativa Japonica Group]
          Length = 439

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 93/295 (31%), Positives = 141/295 (47%), Gaps = 13/295 (4%)

Query: 56  LVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQ 115
           + +LAA  +C   +I+  M++  +     RC G+WK VLRF+ + E      ++     Q
Sbjct: 1   MSELAALDMCQKRAIFKPMTQQEREMFKQRCGGSWKLVLRFIMAGEACCRREKS-----Q 55

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
              G  H++ ++ S +V++ GS+  G LGHG    +      I       ++Q +A    
Sbjct: 56  AIAGPGHSIAVTTSGAVYTFGSNSSGQLGHGSLEEEWRPRI-IRSLQGIRIIQAAAGAGR 114

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHR-DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
              V  +G+V+  G +S     +    +R +  P+LVE+LK +   Q   G  FT  L+ 
Sbjct: 115 TMLVSDAGRVYAFGKDSFGEVEYAAQGSRVVTTPQLVESLKDIYIVQAAIGNFFTAVLSR 174

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVT---GNGV 289
            GHV+T       +LGH    +   P  +A PLE +  VVQIAAG  Y+LA+        
Sbjct: 175 EGHVYTFSWGNDMKLGHQTEPNDVQPHLLAGPLENI-PVVQIAAGYCYLLALACQPSGMS 233

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           VYS G G    LGHG + DE  PR I+ F+   I  V V+AG  H   +   G V
Sbjct: 234 VYSVGCGLGGKLGHGSRTDEKYPRLIEQFQALNIQPVVVAAGAWHAAVVGKDGRV 288



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 94/209 (44%), Gaps = 23/209 (11%)

Query: 114 MQITTGRYHTLLI----SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-- 167
           +QI  G  + L +    S  SV+S G  L G LGHG  T +   + R+     A  +Q  
Sbjct: 213 VQIAAGYCYLLALACQPSGMSVYSVGCGLGGKLGHGSRTDE--KYPRLIEQFQALNIQPV 270

Query: 168 -VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
            V+A   HAA V + G+V T G     C GH +       P++VE+L  V    V  G  
Sbjct: 271 VVAAGAWHAAVVGKDGRVCTWGWGRYGCLGHGNEECESV-PKVVESLVNVRAVHVATGDY 329

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTLD---RPT----PKSIAPLEEVGS-VVQIAAGP 278
            T  ++ +G V++ G      LGH    +   R T    P+ +  L+     V QI+   
Sbjct: 330 TTFVVSDKGDVYSFGCGESSSLGHNTITEGNNRHTNVLSPELVTSLKRTNERVAQISLTN 389

Query: 279 S-----YMLAVTGNGVVYSFGSGSNFCLG 302
           S     +  A+T +G +Y+FG+G    LG
Sbjct: 390 SIYWNAHTFALTDSGKLYAFGAGDKGQLG 418



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 75/273 (27%), Positives = 106/273 (38%), Gaps = 33/273 (12%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPET 148
           RV+   Q VE   DI       +Q   G + T ++S       FS G+ +   LGH  E 
Sbjct: 143 RVVTTPQLVESLKDIY-----IVQAAIGNFFTAVLSREGHVYTFSWGNDM--KLGHQTEP 195

Query: 149 TQCVSFTRINFPSAAHVVQVSASENHA-AFVLQ-SGQ-VFT--CGDNSSFCCGHRDTNRP 203
                           VVQ++A   +  A   Q SG  V++  CG       G R   + 
Sbjct: 196 NDVQPHLLAGPLENIPVVQIAAGYCYLLALACQPSGMSVYSVGCGLGGKLGHGSRTDEK- 254

Query: 204 IFRPRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 261
              PRL+E  + +  + V   AG      +   G V T G   +G LGHG+      PK 
Sbjct: 255 --YPRLIEQFQALNIQPVVVAAGAWHAAVVGKDGRVCTWGWGRYGCLGHGNEECESVPKV 312

Query: 262 IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-------GEQHDELQPRA 314
           +  L  V   V +A G      V+  G VYSFG G +  LGH           + L P  
Sbjct: 313 VESLVNV-RAVHVATGDYTTFVVSDKGDVYSFGCGESSSLGHNTITEGNNRHTNVLSPEL 371

Query: 315 IQTFRRKGIHVVRVSA-----GDEHVVALDSSG 342
           + + +R    V ++S       + H  AL  SG
Sbjct: 372 VTSLKRTNERVAQISLTNSIYWNAHTFALTDSG 404


>gi|222623170|gb|EEE57302.1| hypothetical protein OsJ_07379 [Oryza sativa Japonica Group]
          Length = 609

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 100/342 (29%), Positives = 155/342 (45%), Gaps = 17/342 (4%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCAL 67
           F +   PS ++  +L++  L   DLA LE T   F       P    SL ++AA  +C  
Sbjct: 124 FPLAVSPS-IVLHVLSTCELDPKDLAALEATCTFFSKPANFEPNFALSLPEVAAFDMCHK 182

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLIS 127
             +   M++  + +L  RC G+WK V +++ + E +           +I  G  H+++++
Sbjct: 183 RPMVKLMAQQEREQLKQRCGGSWKLVFKYIVARERNYS---------RIVAGPGHSIVVT 233

Query: 128 NS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 186
                +S G++  G LG G +T        I    +  + Q +        V  +G V+ 
Sbjct: 234 TKGDAYSFGANCWGQLGLG-DTEDRFKPCLIRSLQSIKITQAAVGSRQTMLVSDTGSVYA 292

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G  S       D    I  P++VE+LKGV   Q   G  F+ FL+  G V+T       
Sbjct: 293 FGKGSFVWEELSDAADHITTPKIVESLKGVFVVQAAIGGYFSAFLSREGQVYTISWGRTE 352

Query: 247 QLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSY--MLAVTGNGV-VYSFGSGSNFCLG 302
           +LGH        P+ ++ PLE V  V QI+AG  Y  MLA    G+ VYS G G    LG
Sbjct: 353 RLGHSSDPSDVEPRLLSGPLEGV-LVAQISAGNCYLLMLAYQPTGMSVYSVGCGLGGKLG 411

Query: 303 HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           HG ++++  P+ I+ F     + V V+AG  H  AL   G V
Sbjct: 412 HGCKNNKGTPKLIEHFLTLSFNPVSVAAGTWHAAALGDDGRV 453



 Score = 39.7 bits (91), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 42/99 (42%), Gaps = 5/99 (5%)

Query: 207 PRLVE---ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           P+L+E    L   P   V AG      L   G V T G    G LGHGD   R  P  + 
Sbjct: 421 PKLIEHFLTLSFNPVS-VAAGTWHAAALGDDGRVCTWGWGHTGCLGHGDEEYRVLPTVVQ 479

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
            L  V   V ++ G      V+ NG  YSFGS  +  +G
Sbjct: 480 GLSNV-KAVHVSTGEYTTFVVSDNGDTYSFGSAESLNIG 517


>gi|115447089|ref|NP_001047324.1| Os02g0597000 [Oryza sativa Japonica Group]
 gi|47847831|dbj|BAD21626.1| rjs-like protein [Oryza sativa Japonica Group]
 gi|113536855|dbj|BAF09238.1| Os02g0597000 [Oryza sativa Japonica Group]
 gi|215717087|dbj|BAG95450.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 537

 Score =  116 bits (291), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 100/342 (29%), Positives = 155/342 (45%), Gaps = 17/342 (4%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCAL 67
           F +   PS ++  +L++  L   DLA LE T   F       P    SL ++AA  +C  
Sbjct: 52  FPLAVSPS-IVLHVLSTCELDPKDLAALEATCTFFSKPANFEPNFALSLPEVAAFDMCHK 110

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLIS 127
             +   M++  + +L  RC G+WK V +++ + E +           +I  G  H+++++
Sbjct: 111 RPMVKLMAQQEREQLKQRCGGSWKLVFKYIVARERNYS---------RIVAGPGHSIVVT 161

Query: 128 NS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 186
                +S G++  G LG G +T        I    +  + Q +        V  +G V+ 
Sbjct: 162 TKGDAYSFGANCWGQLGLG-DTEDRFKPCLIRSLQSIKITQAAVGSRQTMLVSDTGSVYA 220

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G  S       D    I  P++VE+LKGV   Q   G  F+ FL+  G V+T       
Sbjct: 221 FGKGSFVWEELSDAADHITTPKIVESLKGVFVVQAAIGGYFSAFLSREGQVYTISWGRTE 280

Query: 247 QLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSY--MLAVTGNGV-VYSFGSGSNFCLG 302
           +LGH        P+ ++ PLE V  V QI+AG  Y  MLA    G+ VYS G G    LG
Sbjct: 281 RLGHSSDPSDVEPRLLSGPLEGV-LVAQISAGNCYLLMLAYQPTGMSVYSVGCGLGGKLG 339

Query: 303 HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           HG ++++  P+ I+ F     + V V+AG  H  AL   G V
Sbjct: 340 HGCKNNKGTPKLIEHFLTLSFNPVSVAAGTWHAAALGDDGRV 381



 Score = 39.3 bits (90), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 42/98 (42%), Gaps = 3/98 (3%)

Query: 207 PRLVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
           P+L+E    +    V+  AG      L   G V T G    G LGHGD   R  P  +  
Sbjct: 349 PKLIEHFLTLSFNPVSVAAGTWHAAALGDDGRVCTWGWGHTGCLGHGDEEYRVLPTVVQG 408

Query: 265 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
           L  V   V ++ G      V+ NG  YSFGS  +  +G
Sbjct: 409 LSNV-KAVHVSTGEYTTFVVSDNGDTYSFGSAESLNIG 445


>gi|359473138|ref|XP_003631252.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2 isoform 2
           [Vitis vinifera]
          Length = 526

 Score =  115 bits (287), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 95/296 (32%), Positives = 141/296 (47%), Gaps = 13/296 (4%)

Query: 55  SLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNM 114
           S+ +LAA  +C   +I+  M    +  L  RC G+WK VLRFL + E      ++     
Sbjct: 86  SISELAALDMCLKRAIFRPMMLEEREVLKQRCGGSWKLVLRFLLAGEACCRREKS----- 140

Query: 115 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q   G  H++ ++   +V+S GS+  G LGHG  T +     +I       ++Q +A   
Sbjct: 141 QAIAGPGHSIAVTVKGAVYSFGSNSSGQLGHG-TTDEEWRPRQIRSLEGIRIIQAAAGAG 199

Query: 174 HAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
               +  +GQV+  G +S      G + T + +  P+LVE+LK +   Q   G  FT  L
Sbjct: 200 RTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTTPQLVESLKNIFVVQAAIGNFFTAVL 258

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT--GNGV 289
           +  G V+T       +LGH    +   P  +    E   VVQIAAG  Y+LA+    NG+
Sbjct: 259 SREGRVYTFSWGNDAKLGHQTEANDLEPHPLLGALENIPVVQIAAGYCYLLALACQPNGM 318

Query: 290 -VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            VYS G G    LGHG + DE  PR I+ FR   +  + V+AG  H   +   G V
Sbjct: 319 SVYSVGCGLGGKLGHGTRTDEKHPRLIEQFRILNLQPMVVAAGAWHAAVVGRDGRV 374



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 61/212 (28%), Positives = 93/212 (43%), Gaps = 28/212 (13%)

Query: 114 MQITTGRYHTLLIS----NSSVFSCGSSLCGVLGHGPETTQ-----CVSFTRINFPSAAH 164
           +QI  G  + L ++      SV+S G  L G LGHG  T +        F  +N      
Sbjct: 299 VQIAAGYCYLLALACQPNGMSVYSVGCGLGGKLGHGTRTDEKHPRLIEQFRILNL----Q 354

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
            + V+A   HAA V + G+V T G     C GH +       P++VEAL  V    V  G
Sbjct: 355 PMVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECESV-PKVVEALINVKAVHVATG 413

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP--------TPKSIAPLEEVGS-VVQIA 275
              T  ++  G V++ G      LGH +  D          +P+ +  L+++   +VQI+
Sbjct: 414 DYTTFVVSDDGDVYSFGCGESSSLGHNNGPDGQGNRHANILSPELVTSLKQIKERMVQIS 473

Query: 276 AGPS-----YMLAVTGNGVVYSFGSGSNFCLG 302
              S     +  A+T  G +Y+FG+G    LG
Sbjct: 474 LTNSIYWNAHTFALTETGKLYAFGAGDKGQLG 505



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 66/252 (26%), Positives = 101/252 (40%), Gaps = 29/252 (11%)

Query: 114 MQITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
           +Q   G + T ++S       FS G+     LGH  E         +       VVQ++A
Sbjct: 246 VQAAIGNFFTAVLSREGRVYTFSWGND--AKLGHQTEANDLEPHPLLGALENIPVVQIAA 303

Query: 171 SENHA-AFVLQSG--QVFT--CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ--VTA 223
              +  A   Q     V++  CG       G R   +    PRL+E  + +  +   V A
Sbjct: 304 GYCYLLALACQPNGMSVYSVGCGLGGKLGHGTRTDEK---HPRLIEQFRILNLQPMVVAA 360

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G      +   G V T G   +G LGHG+      PK +  L  V   V +A G      
Sbjct: 361 GAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECESVPKVVEALINV-KAVHVATGDYTTFV 419

Query: 284 VTGNGVVYSFGSGSNFCLGH-------GEQH-DELQPRAIQTFRRKGIHVVRVSA----- 330
           V+ +G VYSFG G +  LGH       G +H + L P  + + ++    +V++S      
Sbjct: 420 VSDDGDVYSFGCGESSSLGHNNGPDGQGNRHANILSPELVTSLKQIKERMVQISLTNSIY 479

Query: 331 GDEHVVALDSSG 342
            + H  AL  +G
Sbjct: 480 WNAHTFALTETG 491


>gi|356510726|ref|XP_003524086.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Glycine max]
          Length = 291

 Score =  115 bits (287), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 50/67 (74%), Positives = 59/67 (88%)

Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           PSY+L+   NG VYSFGSG+NFCLGHG+QHDELQP  IQ FRRKGIH+VR+SAGDEH VA
Sbjct: 81  PSYILSAIENGTVYSFGSGANFCLGHGDQHDELQPHPIQKFRRKGIHIVRISAGDEHAVA 140

Query: 338 LDSSGYV 344
           +DS+G+V
Sbjct: 141 VDSNGFV 147



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/171 (29%), Positives = 84/171 (49%), Gaps = 9/171 (5%)

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL--KGVPCKQVTAGLNFTGFLTIRGH 236
           +++G V++ G  ++FC GH D +  + +P  ++    KG+   +++AG      +   G 
Sbjct: 88  IENGTVYSFGSGANFCLGHGDQHDEL-QPHPIQKFRRKGIHIVRISAGDEHAVAVDSNGF 146

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS- 295
           V+T G    G LGHGD +D  TPK +  L+    VVQ+         +  +G +Y FGS 
Sbjct: 147 VYTWGKGYCGALGHGDEIDNTTPKLLTSLKNQ-LVVQVCVRKRKTFVLVNSGSMYGFGSM 205

Query: 296 --GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             GS   L        L+PR + T R    HV ++S G  H + + S G++
Sbjct: 206 GFGSLGFLDRRVSDKVLKPRILDTLRAH--HVSQISTGLYHTMVITSRGHI 254



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 68/144 (47%), Gaps = 5/144 (3%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           ++I+ G  H + + SN  V++ G   CG LGHG E          +  +   VVQV   +
Sbjct: 129 VRISAGDEHAVAVDSNGFVYTWGKGYCGALGHGDEIDNTTPKLLTSLKNQL-VVQVCVRK 187

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCG--HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
                ++ SG ++  G       G   R  +  + +PR+++ L+     Q++ GL  T  
Sbjct: 188 RKTFVLVNSGSMYGFGSMGFGSLGFLDRRVSDKVLKPRILDTLRAHHVSQISTGLYHTMV 247

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTL 254
           +T RGH+   G N   QLGH DTL
Sbjct: 248 ITSRGHIFGFGDNERAQLGH-DTL 270



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 56/193 (29%), Positives = 79/193 (40%), Gaps = 4/193 (2%)

Query: 126 ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSASENHAAFVLQSGQV 184
           I N +V+S GS     LGHG +  +        F     H+V++SA + HA  V  +G V
Sbjct: 88  IENGTVYSFGSGANFCLGHGDQHDELQPHPIQKFRRKGIHIVRISAGDEHAVAVDSNGFV 147

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
           +T G       GH D       P+L+ +LK     QV      T  L   G ++  GS  
Sbjct: 148 YTWGKGYCGALGHGDEIDNT-TPKLLTSLKNQLVVQVCVRKRKTFVLVNSGSMYGFGSMG 206

Query: 245 HGQLGHGD--TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
            G LG  D    D+     I        V QI+ G  + + +T  G ++ FG      LG
Sbjct: 207 FGSLGFLDRRVSDKVLKPRILDTLRAHHVSQISTGLYHTMVITSRGHIFGFGDNERAQLG 266

Query: 303 HGEQHDELQPRAI 315
           H      L+P  I
Sbjct: 267 HDTLTSCLEPTQI 279


>gi|18404804|ref|NP_566789.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|14334716|gb|AAK59536.1| unknown protein [Arabidopsis thaliana]
 gi|16323434|gb|AAL15211.1| unknown protein [Arabidopsis thaliana]
 gi|332643597|gb|AEE77118.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
          Length = 432

 Score =  114 bits (286), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 94/291 (32%), Positives = 135/291 (46%), Gaps = 21/291 (7%)

Query: 64  LCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHT 123
           +C    I+  M+   + E+  RC G+WK VLRFL + E      ++     Q   G  H+
Sbjct: 1   MCNKRVIFKPMNEEERQEMKRRCGGSWKLVLRFLLAGEACCRREKS-----QAVAGPGHS 55

Query: 124 LLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSG 182
           + + S   V++ G +  G LGHG  T        +       ++Q +A       +   G
Sbjct: 56  VAVTSKGEVYTFGYNNSGQLGHG-HTEDEARIQPVRSLQGVRIIQAAAGAARTMLISDDG 114

Query: 183 QVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           +V+ CG  S      G + T +P+  P+LV +LK +   Q   G  FT  L+  G V+T 
Sbjct: 115 KVYACGKESFGEAEYGGQGT-KPVTTPQLVTSLKNIFVVQAAIGNYFTAVLSREGKVYTF 173

Query: 241 GSNTHGQLGH----GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT--GNGV-VYSF 293
                G+LGH     D   RP    + PLE V  VVQIAAG  Y+LA+    NG+ VYS 
Sbjct: 174 SWGNDGRLGHQTEAADVEPRPL---LGPLENV-PVVQIAAGYCYLLALACQPNGMSVYSV 229

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G G    LGHG + DE  PR I+ F+   +    V+AG  H   +   G V
Sbjct: 230 GCGLGGKLGHGSRTDEKYPRVIEQFQILNLQPRVVAAGAWHAAVVGQDGRV 280



 Score = 54.7 bits (130), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 68/252 (26%), Positives = 100/252 (39%), Gaps = 29/252 (11%)

Query: 114 MQITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
           +Q   G Y T ++S       FS G+   G LGH  E         +       VVQ++A
Sbjct: 152 VQAAIGNYFTAVLSREGKVYTFSWGND--GRLGHQTEAADVEPRPLLGPLENVPVVQIAA 209

Query: 171 SENHA-AFVLQSG--QVFT--CGDNSSFCCGHRDTNRPIFRPRLVEALK--GVPCKQVTA 223
              +  A   Q     V++  CG       G R   +    PR++E  +   +  + V A
Sbjct: 210 GYCYLLALACQPNGMSVYSVGCGLGGKLGHGSRTDEK---YPRVIEQFQILNLQPRVVAA 266

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G      +   G V T G   +G LGHG+      PK +  L  V   V +A G      
Sbjct: 267 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVEGLSHV-KAVHVATGDYTTFV 325

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDE--------LQPRAIQTFRRKGIHVVRVSA----- 330
           V+ +G VYSFG G +  LGH    DE        L P  + + ++    +V++S      
Sbjct: 326 VSDDGDVYSFGCGESASLGHHPSFDEQGNRHANVLSPTVVTSLKQVNERMVQISLTNSIY 385

Query: 331 GDEHVVALDSSG 342
            + H  AL  SG
Sbjct: 386 WNAHTFALTESG 397



 Score = 48.1 bits (113), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 2/75 (2%)

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
           Q  AGP + +AVT  G VY+FG  ++  LGHG   DE + + +++   +G+ +++ +AG 
Sbjct: 47  QAVAGPGHSVAVTSKGEVYTFGYNNSGQLGHGHTEDEARIQPVRSL--QGVRIIQAAAGA 104

Query: 333 EHVVALDSSGYVSLC 347
              + +   G V  C
Sbjct: 105 ARTMLISDDGKVYAC 119


>gi|357463177|ref|XP_003601870.1| RCC1 domain-containing protein [Medicago truncatula]
 gi|355490918|gb|AES72121.1| RCC1 domain-containing protein [Medicago truncatula]
          Length = 432

 Score =  114 bits (285), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 92/287 (32%), Positives = 139/287 (48%), Gaps = 13/287 (4%)

Query: 64  LCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHT 123
           +C   +I+  M+   + +L  RC G+WK VLR+L + E      ++     Q   G  H+
Sbjct: 1   MCMKRAIFKPMTTEERQDLKQRCGGSWKLVLRYLLAGEACCRREKS-----QAIAGPGHS 55

Query: 124 LLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSG 182
           + + S   V+S GS+  G LGHG  T +      I       ++Q +A       +  SG
Sbjct: 56  IAVTSKGDVYSFGSNSSGQLGHGT-TEEEWRPKPIRTLQGIRIIQAAAGAGRTMLITDSG 114

Query: 183 QVFTCGDNSSFCCGHR-DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 241
           QV+  G +S     +    ++ +  PRLVE+LK +   Q   G  FT  L+  G V+T  
Sbjct: 115 QVYAFGKDSFGEAEYGGQGSKTVIAPRLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174

Query: 242 SNTHGQLG-HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM--LAVTGNGV-VYSFGSGS 297
             + G+LG H D+ D      +  LE++  VVQIAAG  Y+  LA   +G+ VYS G G 
Sbjct: 175 WGSDGKLGHHTDSNDMEPHPLLGALEDI-PVVQIAAGYCYLLCLACQPSGMSVYSVGCGL 233

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              LGHG + DE  PR I+ F+   +  + +SAG  H   +   G V
Sbjct: 234 GGKLGHGTRTDEKFPRLIEQFQTLNLQPMVISAGAWHAAVVGRDGRV 280



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 64/216 (29%), Positives = 94/216 (43%), Gaps = 36/216 (16%)

Query: 114 MQITTGRYHTLLI----SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-- 167
           +QI  G  + L +    S  SV+S G  L G LGHG  T +        FP      Q  
Sbjct: 205 VQIAAGYCYLLCLACQPSGMSVYSVGCGLGGKLGHGTRTDE-------KFPRLIEQFQTL 257

Query: 168 ------VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
                 +SA   HAA V + G+V T G     C GH +       P++V+AL  V    V
Sbjct: 258 NLQPMVISAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECEA-APKVVDALTNVKAVHV 316

Query: 222 TAGLNFTGFLTIR-GHVHTCGSNTHGQLGHGDTLDRP--------TPKSIAPLEEVGS-V 271
             G ++T F+    G V++ G      LGH   +D           P+ +  L+++   V
Sbjct: 317 ATG-DYTTFVVAEDGDVYSFGCGESASLGHNAVIDAEGNRHANVLNPELVTSLKQINERV 375

Query: 272 VQIAAGPS-----YMLAVTGNGVVYSFGSGSNFCLG 302
           VQI+   S     +  A+T +G +Y+FG+G    LG
Sbjct: 376 VQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 67/250 (26%), Positives = 101/250 (40%), Gaps = 25/250 (10%)

Query: 114 MQITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
           +Q   G + T ++S       FS GS   G LGH  ++        +       VVQ++A
Sbjct: 152 VQAAIGNFFTAVLSREGRVYTFSWGSD--GKLGHHTDSNDMEPHPLLGALEDIPVVQIAA 209

Query: 171 SENHA---AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ--VTAGL 225
              +    A       V++ G       GH       F PRL+E  + +  +   ++AG 
Sbjct: 210 GYCYLLCLACQPSGMSVYSVGCGLGGKLGHGTRTDEKF-PRLIEQFQTLNLQPMVISAGA 268

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
                +   G V T G   +G LGHG+      PK +  L  V   V +A G      V 
Sbjct: 269 WHAAVVGRDGRVCTWGWGRYGCLGHGNEECEAAPKVVDALTNV-KAVHVATGDYTTFVVA 327

Query: 286 GNGVVYSFGSGSNFCLGH-------GEQH-DELQPRAIQTFRRKGIHVVRVSA-----GD 332
            +G VYSFG G +  LGH       G +H + L P  + + ++    VV++S       +
Sbjct: 328 EDGDVYSFGCGESASLGHNAVIDAEGNRHANVLNPELVTSLKQINERVVQISLTNSIYWN 387

Query: 333 EHVVALDSSG 342
            H  AL  SG
Sbjct: 388 AHTFALTESG 397


>gi|218191099|gb|EEC73526.1| hypothetical protein OsI_07916 [Oryza sativa Indica Group]
          Length = 634

 Score =  114 bits (285), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 100/342 (29%), Positives = 154/342 (45%), Gaps = 17/342 (4%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCAL 67
           F +   PS ++  +L++  L   DLA LE T   F       P    SL ++AA  +C  
Sbjct: 149 FPLAVSPS-IVLHVLSTCELDPKDLAALEATCTFFSKPANFEPNFALSLPEVAAFDMCHK 207

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLIS 127
             +   M++  + +L  RC G+WK VL+++ + E +           +I  G  H+++++
Sbjct: 208 RPMVKLMAQQEREQLKQRCGGSWKLVLKYIVARERNYS---------RIVAGPGHSIVVT 258

Query: 128 NS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 186
                +S G++  G LG G +T        I       + Q +        V  +G V+ 
Sbjct: 259 TKGDAYSFGANCWGQLGLG-DTEDRFKPCLIRSLQGIKITQAAVGSRQTMLVSDTGSVYA 317

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G  S       D    I  P++VE+LKGV   Q   G  F+ FL+  G V+T       
Sbjct: 318 FGKGSFVWEELSDAADHITTPKIVESLKGVFVVQAAIGGYFSAFLSREGQVYTISWGRTE 377

Query: 247 QLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSY--MLAVTGNGV-VYSFGSGSNFCLG 302
           +LGH        P+ ++ PLE V  V QI+AG  Y  MLA    G+ VYS G G    LG
Sbjct: 378 RLGHSSDPSDVEPRLLSGPLEGV-LVAQISAGNCYLLMLAYQPTGMSVYSVGCGLGGKLG 436

Query: 303 HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           HG ++++   + I+ F     + V V+AG  H  AL   G V
Sbjct: 437 HGCKNNKGTTKLIEHFLTLSFNPVSVAAGTWHAAALGDDGRV 478



 Score = 39.3 bits (90), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 35/82 (42%), Gaps = 1/82 (1%)

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           V AG      L   G V T G    G LGHGD   R  P  +  L  V   V ++ G   
Sbjct: 462 VAAGTWHAAALGDDGRVCTWGWGHTGCLGHGDEEYRVLPTVVQGLSNV-KAVHVSTGEYT 520

Query: 281 MLAVTGNGVVYSFGSGSNFCLG 302
              V+ NG  YSFGS  +  +G
Sbjct: 521 TFVVSDNGDTYSFGSAESLNIG 542


>gi|397599967|gb|EJK57568.1| hypothetical protein THAOC_22376, partial [Thalassiosira oceanica]
          Length = 657

 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 83/263 (31%), Positives = 132/263 (50%), Gaps = 19/263 (7%)

Query: 83  LNRCNGNWKRVLRFLQSVEHSSDIVETSAGNM--QITTGRYHTLLISNS-SVFSCGSSLC 139
           L   +  WK V R   S+          AG +   +T G YHT  +S+  ++F+ G  + 
Sbjct: 39  LGHGDNGWKYVPRLTHSL----------AGQVITHVTCGSYHTAAVSSKGNLFTWGGGMY 88

Query: 140 GVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRD 199
           G LGHG E+       R++      VV ++    H A V   G ++T GD  +   GH D
Sbjct: 89  GKLGHGNESGHSTP-KRVDSLVGLAVVDIACGSRHTAIVTSRGCLYTWGDKENGVAGHGD 147

Query: 200 TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP 259
           T    + P+L+E L G    Q++A    TG LT  G V+T G    G+LGHG   +  +P
Sbjct: 148 TEGHQYTPKLLERLSGKRVVQLSACGFHTGCLTDAGEVYTWGEGKFGRLGHGAERNCHSP 207

Query: 260 KSIAPLEEVGS-VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 318
           + +  L  +G   VQI+ G  +   VT +G +Y+FG G +  LGHG++ ++++P  ++  
Sbjct: 208 RLVETL--LGKRPVQISCGGFHSAVVTADGKMYTFGGGEHGQLGHGDKVNKVKPTLVKDL 265

Query: 319 RRKGIHVVRVSAGDEHVVALDSS 341
              G+ + +++ G  H VAL SS
Sbjct: 266 --DGVFLTQITCGWSHSVALTSS 286



 Score = 94.7 bits (234), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 71/226 (31%), Positives = 111/226 (49%), Gaps = 5/226 (2%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + I  G  HT ++ S   +++ G    GV GHG       +   +   S   VVQ+SA  
Sbjct: 114 VDIACGSRHTAIVTSRGCLYTWGDKENGVAGHGDTEGHQYTPKLLERLSGKRVVQLSACG 173

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H   +  +G+V+T G+      GH    R    PRLVE L G    Q++ G   +  +T
Sbjct: 174 FHTGCLTDAGEVYTWGEGKFGRLGH-GAERNCHSPRLVETLLGKRPVQISCGGFHSAVVT 232

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G ++T G   HGQLGHGD +++  P  +  L+ V  + QI  G S+ +A+T +  VY+
Sbjct: 233 ADGKMYTFGGGEHGQLGHGDKVNKVKPTLVKDLDGV-FLTQITCGWSHSVALTSSHEVYT 291

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           +G+G +  LGHG       P+ ++     G  VV V++ +EH   L
Sbjct: 292 WGNGDHGKLGHGCGKKVSTPQLVEKL--VGQKVVCVASYNEHTACL 335



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 65/214 (30%), Positives = 99/214 (46%), Gaps = 8/214 (3%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV-QVSASENHAAFVLQSGQVFTCGD 189
           V++ G    G LGHG    + V   R+    A  V+  V+    H A V   G +FT G 
Sbjct: 28  VYTWGRGDDGRLGHGDNGWKYVP--RLTHSLAGQVITHVTCGSYHTAAVSSKGNLFTWGG 85

Query: 190 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
                 GH + +     P+ V++L G+    +  G   T  +T RG ++T G   +G  G
Sbjct: 86  GMYGKLGHGNESGHS-TPKRVDSLVGLAVVDIACGSRHTAIVTSRGCLYTWGDKENGVAG 144

Query: 250 HGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD 308
           HGDT   + TPK +  L     VVQ++A   +   +T  G VY++G G    LGHG + +
Sbjct: 145 HGDTEGHQYTPKLLERLSGK-RVVQLSACGFHTGCLTDAGEVYTWGEGKFGRLGHGAERN 203

Query: 309 ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
              PR ++T    G   V++S G  H   + + G
Sbjct: 204 CHSPRLVETLL--GKRPVQISCGGFHSAVVTADG 235



 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 83/168 (49%), Gaps = 5/168 (2%)

Query: 101 EHSSDIVETSAGN--MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRI 157
           +++  ++E  +G   +Q++   +HT  ++++  V++ G    G LGHG E   C S   +
Sbjct: 152 QYTPKLLERLSGKRVVQLSACGFHTGCLTDAGEVYTWGEGKFGRLGHGAER-NCHSPRLV 210

Query: 158 NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVP 217
                   VQ+S    H+A V   G+++T G       GH D    + +P LV+ L GV 
Sbjct: 211 ETLLGKRPVQISCGGFHSAVVTADGKMYTFGGGEHGQLGHGDKVNKV-KPTLVKDLDGVF 269

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 265
             Q+T G + +  LT    V+T G+  HG+LGHG      TP+ +  L
Sbjct: 270 LTQITCGWSHSVALTSSHEVYTWGNGDHGKLGHGCGKKVSTPQLVEKL 317



 Score = 46.6 bits (109), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 52/109 (47%), Gaps = 5/109 (4%)

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLAVTGNGVVYSF 293
           G V+T G    G+LGHGD   +  P+    L   G V+  +  G  +  AV+  G ++++
Sbjct: 26  GGVYTWGRGDDGRLGHGDNGWKYVPRLTHSL--AGQVITHVTCGSYHTAAVSSKGNLFTW 83

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           G G    LGHG +     P+ + +    G+ VV ++ G  H   + S G
Sbjct: 84  GGGMYGKLGHGNESGHSTPKRVDSL--VGLAVVDIACGSRHTAIVTSRG 130


>gi|348687440|gb|EGZ27254.1| hypothetical protein PHYSODRAFT_358246 [Phytophthora sojae]
          Length = 545

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 82/264 (31%), Positives = 126/264 (47%), Gaps = 15/264 (5%)

Query: 83  LNRCNGNWKRVLRFLQSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCG 140
           L   +  WK V R ++         E    N+ Q+T G YHT  ++ S  +++ G  + G
Sbjct: 66  LGHGDNGWKFVPRLVE---------ELRGKNIRQVTCGSYHTAAVTVSGDLYTWGGGMYG 116

Query: 141 VLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT 200
            LGHG ET     F  +       V QV+    H   +L++  V+T GD  +   GH DT
Sbjct: 117 KLGHGNETGHSTPFL-VETLKGMQVRQVACGSRHTVVLLENKDVYTWGDKENGVSGHGDT 175

Query: 201 NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 260
               + P  VE L+G    Q++A    T  L+  G V T G    G+LGH    ++P  +
Sbjct: 176 EGHQYLPCPVEELRGKNIVQISACGFHTAALSEFGEVFTFGEGKFGRLGHNSERNQPVAR 235

Query: 261 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR 320
            +  L     V Q+A G  +  AVT  G VY++G G +  LGHG++ ++  P  +++   
Sbjct: 236 FVEALAG-KRVKQVACGGFHTAAVTETGEVYTWGGGEHGQLGHGDKVNKTVPTRVESLVE 294

Query: 321 KGIHVVRVSAGDEHVVALDSSGYV 344
           K   VV+++ G  H VAL  +G V
Sbjct: 295 K--LVVQITCGWSHTVALTDTGEV 316



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 72/217 (33%), Positives = 105/217 (48%), Gaps = 8/217 (3%)

Query: 130 SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 189
           +V+S G    G LG G  + Q      I+  +   +VQ++    H   +   G+V+T G 
Sbjct: 2   TVYSWGRGEDGQLGLGDTSDQHRPVP-IDALAERRIVQIACGSGHTVVLTDEGEVYTWGR 60

Query: 190 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
                 GH D N   F PRLVE L+G   +QVT G   T  +T+ G ++T G   +G+LG
Sbjct: 61  GDDGRLGHGD-NGWKFVPRLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWGGGMYGKLG 119

Query: 250 HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG--EQH 307
           HG+     TP  +  L+ +  V Q+A G  + + +  N  VY++G   N   GHG  E H
Sbjct: 120 HGNETGHSTPFLVETLKGM-QVRQVACGSRHTVVLLENKDVYTWGDKENGVSGHGDTEGH 178

Query: 308 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             L P  ++  R K I  V++SA   H  AL   G V
Sbjct: 179 QYL-PCPVEELRGKNI--VQISACGFHTAALSEFGEV 212



 Score = 72.0 bits (175), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 54/155 (34%), Positives = 76/155 (49%), Gaps = 5/155 (3%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QI+   +HT  +S    VF+ G    G LGH  E  Q V+   +   +   V QV+   
Sbjct: 194 VQISACGFHTAALSEFGEVFTFGEGKFGRLGHNSERNQPVA-RFVEALAGKRVKQVACGG 252

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
            H A V ++G+V+T G       GH D  N+ +  P  VE+L      Q+T G + T  L
Sbjct: 253 FHTAAVTETGEVYTWGGGEHGQLGHGDKVNKTV--PTRVESLVEKLVVQITCGWSHTVAL 310

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           T  G V+T G+  HG+LGH DT     PK +  LE
Sbjct: 311 TDTGEVYTWGNGDHGKLGHNDTTKVTLPKLVDVLE 345


>gi|387193358|gb|AFJ68699.1| hypothetical protein NGATSA_3056200, partial [Nannochloropsis
           gaditana CCMP526]
          Length = 511

 Score =  107 bits (268), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 79/263 (30%), Positives = 125/263 (47%), Gaps = 13/263 (4%)

Query: 83  LNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGV 141
           L   + +WK V   + ++        T     Q+T G YHT  IS++ ++++ G  + G 
Sbjct: 71  LGHADNHWKYVPHLVSAL--------TGKSIKQVTCGSYHTAAISDTGALWTWGGGMYGK 122

Query: 142 LGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN 201
           LGHG E        R+       V Q++    H A +L  G+V+  GD  +  CG  +  
Sbjct: 123 LGHGNEVGHPAP-CRVEAFIGREVEQIACGSRHTAALLAGGEVYCWGDRENGVCGIGEAA 181

Query: 202 RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 261
              + P+ +EALKGV   Q+ A    T  +T  G + + G    G+LG G+  ++ TP  
Sbjct: 182 EHQYLPKKLEALKGVKITQIAACGFHTAAITQDGALWSWGEGKFGRLGQGNEKNQVTPCC 241

Query: 262 IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 321
           +  L+ V  V Q+A G  +   VT +G V +FG G +  LGHG++ +   P  ++     
Sbjct: 242 VEGLQGV-RVKQVACGGFHSACVTEDGDVLTFGGGEHGQLGHGDKTNRTVPCLVKALEGA 300

Query: 322 GIHVVRVSAGDEHVVALDSSGYV 344
           GI  V+V+ G  H V L   G V
Sbjct: 301 GI--VQVTCGWSHTVTLSEDGKV 321



 Score = 77.4 bits (189), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 97/218 (44%), Gaps = 10/218 (4%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S ++S G    G  G+G    Q +            VVQ++    H   + +   V++ 
Sbjct: 5   DSMLYSWGRGEDGQCGNGSTNDQEMPMPVEGLKHLT-VVQIACGSGHTVVLTEDKDVWSW 63

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G       GH D N   + P LV AL G   KQVT G   T  ++  G + T G   +G+
Sbjct: 64  GRGDDGRLGHAD-NHWKYVPHLVSALTGKSIKQVTCGSYHTAAISDTGALWTWGGGMYGK 122

Query: 248 LGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE- 305
           LGHG+ +  P P  +     +G  V QIA G  +  A+   G VY +G   N   G GE 
Sbjct: 123 LGHGNEVGHPAPCRVEAF--IGREVEQIACGSRHTAALLAGGEVYCWGDRENGVCGIGEA 180

Query: 306 -QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            +H  L P+ ++    KG+ + +++A   H  A+   G
Sbjct: 181 AEHQYL-PKKLEAL--KGVKITQIAACGFHTAAITQDG 215



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/172 (33%), Positives = 84/172 (48%), Gaps = 6/172 (3%)

Query: 115 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI    +HT  I+ + +++S G    G LG G E  Q V+   +       V QV+    
Sbjct: 200 QIAACGFHTAAITQDGALWSWGEGKFGRLGQGNEKNQ-VTPCCVEGLQGVRVKQVACGGF 258

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           H+A V + G V T G       GH D TNR +  P LV+AL+G    QVT G + T  L+
Sbjct: 259 HSACVTEDGDVLTFGGGEHGQLGHGDKTNRTV--PCLVKALEGAGIVQVTCGWSHTVTLS 316

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             G V T G+  HG+LGHG       PK +  L  +  V ++A+   + +A+
Sbjct: 317 EDGKVFTFGNGDHGKLGHGANAKSALPKLVESLANM-KVAKVASYNEHTVAL 367



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 72/161 (44%), Gaps = 4/161 (2%)

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           +++ G      CG+  TN     P  VE LK +   Q+  G   T  LT    V + G  
Sbjct: 8   LYSWGRGEDGQCGNGSTNDQEM-PMPVEGLKHLTVVQIACGSGHTVVLTEDKDVWSWGRG 66

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 303
             G+LGH D   +  P  ++ L    S+ Q+  G  +  A++  G ++++G G    LGH
Sbjct: 67  DDGRLGHADNHWKYVPHLVSALTGK-SIKQVTCGSYHTAAISDTGALWTWGGGMYGKLGH 125

Query: 304 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G +     P  ++ F   G  V +++ G  H  AL + G V
Sbjct: 126 GNEVGHPAPCRVEAF--IGREVEQIACGSRHTAALLAGGEV 164


>gi|301106605|ref|XP_002902385.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
 gi|262098259|gb|EEY56311.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
          Length = 545

 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 79/264 (29%), Positives = 126/264 (47%), Gaps = 15/264 (5%)

Query: 83  LNRCNGNWKRVLRFLQSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCG 140
           L   +  WK V R ++         E    N+ Q+T G YHT  ++ S  +++ G  + G
Sbjct: 66  LGHGDNGWKFVPRLVE---------ELRGKNIRQVTCGSYHTAAVTVSGDLYTWGGGMYG 116

Query: 141 VLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT 200
            LGHG ET     +  +    +  V QV+    H   +L++  V+T GD  +   GH DT
Sbjct: 117 KLGHGNETGHSTPYL-VETLKSMQVRQVACGSRHTVVLLENKDVYTWGDKENGVSGHGDT 175

Query: 201 NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 260
               + P  VE L+G    Q++A    T  L+  G V T G    G+LGH    ++P  +
Sbjct: 176 EGHQYLPCPVEELRGKSIVQISACGFHTAALSEFGEVFTFGEGKFGRLGHNSERNQPVAR 235

Query: 261 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR 320
            +  L     V Q+A G  +  AVT  G VY++G G +  LGHG++ ++  P  +++   
Sbjct: 236 FVDALAG-KRVKQVACGGFHTAAVTETGEVYTWGGGEHGQLGHGDKVNKTVPTRVESLLE 294

Query: 321 KGIHVVRVSAGDEHVVALDSSGYV 344
           K   V++++ G  H V L  +G V
Sbjct: 295 K--LVLQITCGWSHTVTLTDTGEV 316



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 72/217 (33%), Positives = 106/217 (48%), Gaps = 8/217 (3%)

Query: 130 SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 189
           +V+S G    G LG G  + Q      I+  +   +VQ++    H   + + G+V+T G 
Sbjct: 2   TVYSWGRGEDGQLGLGDTSDQHRPVP-IDALAERRIVQIACGSGHTVVLTEEGEVYTWGR 60

Query: 190 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
                 GH D N   F PRLVE L+G   +QVT G   T  +T+ G ++T G   +G+LG
Sbjct: 61  GDDGRLGHGD-NGWKFVPRLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWGGGMYGKLG 119

Query: 250 HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG--EQH 307
           HG+     TP  +  L+ +  V Q+A G  + + +  N  VY++G   N   GHG  E H
Sbjct: 120 HGNETGHSTPYLVETLKSM-QVRQVACGSRHTVVLLENKDVYTWGDKENGVSGHGDTEGH 178

Query: 308 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             L P  ++  R K I  V++SA   H  AL   G V
Sbjct: 179 QYL-PCPVEELRGKSI--VQISACGFHTAALSEFGEV 212



 Score = 72.0 bits (175), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 53/155 (34%), Positives = 77/155 (49%), Gaps = 5/155 (3%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QI+   +HT  +S    VF+ G    G LGH  E  Q V+   ++  +   V QV+   
Sbjct: 194 VQISACGFHTAALSEFGEVFTFGEGKFGRLGHNSERNQPVA-RFVDALAGKRVKQVACGG 252

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
            H A V ++G+V+T G       GH D  N+ +  P  VE+L      Q+T G + T  L
Sbjct: 253 FHTAAVTETGEVYTWGGGEHGQLGHGDKVNKTV--PTRVESLLEKLVLQITCGWSHTVTL 310

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           T  G V+T G+  HG+LGH DT     PK +  L+
Sbjct: 311 TDTGEVYTWGNGDHGKLGHNDTAKVTLPKPVDVLD 345


>gi|58376301|ref|XP_308044.2| AGAP002151-PA [Anopheles gambiae str. PEST]
 gi|55246357|gb|EAA03694.2| AGAP002151-PA [Anopheles gambiae str. PEST]
          Length = 474

 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 73/250 (29%), Positives = 117/250 (46%), Gaps = 28/250 (11%)

Query: 122 HTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           H++LI  N   F+ G +    LGHG +T  C   T++   +  +V+Q +   NH  F+  
Sbjct: 117 HSVLIDENWKAFTFGRNQLSQLGHG-DTVTCEKPTQVADLADFNVIQAACGRNHTLFLTD 175

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           +G V+ CGDN S  CG  +    I  P  + +  G P  +V  G  F+  L I+G++HT 
Sbjct: 176 TGTVYACGDNKSGQCGVGNKLPTITSPTRI-SYNGPPIIKVGCGAEFSVILDIKGNLHTF 234

Query: 241 GSNTHGQLGHGDT------------------------LDRPTPKSIAPLEEVGSVVQIAA 276
           G   +GQLGH                           +++     + P+E V +++  A 
Sbjct: 235 GLPEYGQLGHNTDGRYFVNSTKMSFHFETQPRKVLVYMEKNKEGHVLPIENV-NIIDFAC 293

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
           G ++ +A+      YS+G G    LGH EQ DE+ PR I+ F  +   V+RV  G  + +
Sbjct: 294 GNNHTVAIDSKNRAYSWGFGGIGRLGHAEQKDEMVPRLIKFFDTQNRKVMRVFCGSSYSL 353

Query: 337 ALDSSGYVSL 346
           A+   G + L
Sbjct: 354 AISDIGSLYL 363



 Score = 47.4 bits (111), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 58/248 (23%), Positives = 103/248 (41%), Gaps = 34/248 (13%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q   GR HTL ++++ +V++CG +  G  G G +     S TRI++ +   +++V    
Sbjct: 161 IQAACGRNHTLFLTDTGTVYACGDNKSGQCGVGNKLPTITSPTRISY-NGPPIIKVGCGA 219

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-----------RPR--LVEALKG---- 215
             +  +   G + T G       GH    R              +PR  LV   K     
Sbjct: 220 EFSVILDIKGNLHTFGLPEYGQLGHNTDGRYFVNSTKMSFHFETQPRKVLVYMEKNKEGH 279

Query: 216 -VPCKQVTA-----GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE-EV 268
            +P + V       G N T  +  +   ++ G    G+LGH +  D   P+ I   + + 
Sbjct: 280 VLPIENVNIIDFACGNNHTVAIDSKNRAYSWGFGGIGRLGHAEQKDEMVPRLIKFFDTQN 339

Query: 269 GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 328
             V+++  G SY LA++  G +Y FG         GE +  + P+ +Q     G ++  +
Sbjct: 340 RKVMRVFCGSSYSLAISDIGSLYLFGQNKK----TGEAN--MYPKPVQDL--AGWNITSI 391

Query: 329 SAGDEHVV 336
             G   +V
Sbjct: 392 GTGYTSIV 399


>gi|260802292|ref|XP_002596026.1| hypothetical protein BRAFLDRAFT_113678 [Branchiostoma floridae]
 gi|229281280|gb|EEN52038.1| hypothetical protein BRAFLDRAFT_113678 [Branchiostoma floridae]
          Length = 1015

 Score =  104 bits (260), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 78/235 (33%), Positives = 122/235 (51%), Gaps = 10/235 (4%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPET--TQCVSFTRINFPSAAHVVQVSAS 171
           Q++ G YH L++++   VFS G   CG LGH  E           +   S+  +VQV+  
Sbjct: 88  QVSCGDYHNLVVNDKYQVFSWGYDDCGQLGHTLEAGGNNSRRPRMVKELSSLQIVQVACG 147

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
             H+  +   G++F+ G+NS    G   T N+P  +P+ + +L G+P  Q+ AG + +  
Sbjct: 148 GKHSLALSNDGRIFSWGNNSHGQLGIGSTKNQP--KPQELTSLTGIPFCQIVAGGSHSFV 205

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           L+  G V   G NT GQLG GDT DR  P  +  L  +  V  I+ G  +   +T +G V
Sbjct: 206 LSKSGAVFGFGRNTFGQLGLGDTGDRKYPTHVKSLRSL-KVTHISCGEEHTAVLTLDGGV 264

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYV 344
            +FG+GS   LGH   + E  PR +  F   G+ V +++ G  H +A ++SSG +
Sbjct: 265 LTFGAGSYGQLGHNSNNHEALPRKV--FELMGLEVTQLACGRMHTMAYVESSGRI 317



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 70/236 (29%), Positives = 116/236 (49%), Gaps = 15/236 (6%)

Query: 115 QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           +++ GR HT+ + +  +V++CGS+  G LG      +    T ++  S   + QVS  + 
Sbjct: 38  EVSCGRQHTVFVLAEGTVYTCGSNDYGQLGQDKGHKRPTVITALDTQS---IQQVSCGDY 94

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
           H   V    QVF+ G +     GH      + +R   RPR+V+ L  +   QV  G   +
Sbjct: 95  HNLVVNDKYQVFSWGYDDCGQLGHTLEAGGNNSR---RPRMVKELSSLQIVQVACGGKHS 151

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
             L+  G + + G+N+HGQLG G T ++P P+ +  L  +    QI AG S+   ++ +G
Sbjct: 152 LALSNDGRIFSWGNNSHGQLGIGSTKNQPKPQELTSLTGI-PFCQIVAGGSHSFVLSKSG 210

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            V+ FG  +   LG G+  D   P  +++ R   + V  +S G+EH   L   G V
Sbjct: 211 AVFGFGRNTFGQLGLGDTGDRKYPTHVKSLR--SLKVTHISCGEEHTAVLTLDGGV 264



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 63/196 (32%), Positives = 97/196 (49%), Gaps = 15/196 (7%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHG-----PETTQCVSFTRINFPSAAHVVQ 167
           +Q+  G  H+L +SN   +FS G++  G LG G     P+  +  S T I F       Q
Sbjct: 142 VQVACGGKHSLALSNDGRIFSWGNNSHGQLGIGSTKNQPKPQELTSLTGIPF------CQ 195

Query: 168 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
           + A  +H+  + +SG VF  G N+    G  DT    + P  V++L+ +    ++ G   
Sbjct: 196 IVAGGSHSFVLSKSGAVFGFGRNTFGQLGLGDTGDRKY-PTHVKSLRSLKVTHISCGEEH 254

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA-VTG 286
           T  LT+ G V T G+ ++GQLGH        P+ +  L  +  V Q+A G  + +A V  
Sbjct: 255 TAVLTLDGGVLTFGAGSYGQLGHNSNNHEALPRKVFELMGL-EVTQLACGRMHTMAYVES 313

Query: 287 NGVVYSFGSGSNFCLG 302
           +G +YSFG G N  LG
Sbjct: 314 SGRIYSFGLGGNGQLG 329



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 66/129 (51%), Gaps = 8/129 (6%)

Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
           ++V+ G   T F+   G V+TCGSN +GQLG      RPT   +    +  S+ Q++ G 
Sbjct: 37  REVSCGRQHTVFVLAEGTVYTCGSNDYGQLGQDKGHKRPT---VITALDTQSIQQVSCGD 93

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQ---HDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
            + L V     V+S+G      LGH  +   ++  +PR ++      + +V+V+ G +H 
Sbjct: 94  YHNLVVNDKYQVFSWGYDDCGQLGHTLEAGGNNSRRPRMVKEL--SSLQIVQVACGGKHS 151

Query: 336 VALDSSGYV 344
           +AL + G +
Sbjct: 152 LALSNDGRI 160



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 78/183 (42%), Gaps = 15/183 (8%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI  G  H+ ++S S +VF  G +  G LG G +T      T +    +  V  +S  E 
Sbjct: 195 QIVAGGSHSFVLSKSGAVFGFGRNTFGQLGLG-DTGDRKYPTHVKSLRSLKVTHISCGEE 253

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG-LNFTGFLT 232
           H A +   G V T G  S    GH   N     PR V  L G+   Q+  G ++   ++ 
Sbjct: 254 HTAVLTLDGGVLTFGAGSYGQLGHNSNNHEAL-PRKVFELMGLEVTQLACGRMHTMAYVE 312

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA----------PLEEVGSVVQ-IAAGPSYM 281
             G +++ G   +GQLG   T +  TP ++            LEE   VVQ I AG    
Sbjct: 313 SSGRIYSFGLGGNGQLGSKGTTNCNTPITVDGPFVPFAGDNSLEEQCYVVQAITAGGDQA 372

Query: 282 LAV 284
            A+
Sbjct: 373 FAL 375


>gi|443688897|gb|ELT91442.1| hypothetical protein CAPTEDRAFT_169244 [Capitella teleta]
          Length = 1060

 Score =  104 bits (259), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 79/234 (33%), Positives = 119/234 (50%), Gaps = 7/234 (2%)

Query: 114 MQITTGRYH-TLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH-VVQVSAS 171
           +Q ++G  H T+L     VF+ GS+    LG G   +   S  R+    A H VVQV+  
Sbjct: 97  LQASSGTKHSTVLTDAGQVFTWGSNEDNQLGRGQVDSASTSIPRMVRGLADHKVVQVACG 156

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +  +GQ++T G N+    G  +   P   P+ V  + G+P  +V AG +    L
Sbjct: 157 SAHTVGLTATGQIYTWGSNNHGQLGLANKT-PQNEPQWVSCISGLPIVRVAAGADHNLVL 215

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           TI G +   G N+ GQLG GD  DR  P  +  L   G +  +A G  + LA+T +G V+
Sbjct: 216 TISGALFAWGCNSFGQLGVGDDQDRGAPTLVKTLRNQG-ICALACGDDHSLALTRDGGVF 274

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYV 344
           +FG+G    LGH   ++EL PR +  F   G  V +++ G +H +A + SSG V
Sbjct: 275 TFGAGMYGQLGHNTSNNELLPRKV--FELMGSSVTQIACGRKHSIAYVPSSGRV 326



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 69/218 (31%), Positives = 108/218 (49%), Gaps = 9/218 (4%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAFVLQSGQVFT 186
            SSV   GS   G LG G    + V+  R I       VV ++    H  FV + G+V +
Sbjct: 8   KSSVLCWGSLTHGQLGLGGLEEETVTLPREIRSFCNVEVVHIACGLQHTLFVKKDGRVLS 67

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
           CG+N     GH    +P  RP L+++L      Q ++G   +  LT  G V T GSN   
Sbjct: 68  CGNNDYGQLGHE---KPCKRPALIDSLGERNVLQASSGTKHSTVLTDAGQVFTWGSNEDN 124

Query: 247 QLGHG--DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG 304
           QLG G  D+     P+ +  L +   VVQ+A G ++ + +T  G +Y++GS ++  LG  
Sbjct: 125 QLGRGQVDSASTSIPRMVRGLAD-HKVVQVACGSAHTVGLTATGQIYTWGSNNHGQLGLA 183

Query: 305 EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            +  + +P+ +      G+ +VRV+AG +H + L  SG
Sbjct: 184 NKTPQNEPQWVSCI--SGLPIVRVAAGADHNLVLTISG 219



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 70/141 (49%), Gaps = 9/141 (6%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           PR + +   V    +  GL  T F+   G V +CG+N +GQLGH     RP     A ++
Sbjct: 35  PREIRSFCNVEVVHIACGLQHTLFVKKDGRVLSCGNNDYGQLGHEKPCKRP-----ALID 89

Query: 267 EVG--SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            +G  +V+Q ++G  +   +T  G V+++GS  +  LG G Q D       +  R    H
Sbjct: 90  SLGERNVLQASSGTKHSTVLTDAGQVFTWGSNEDNQLGRG-QVDSASTSIPRMVRGLADH 148

Query: 325 -VVRVSAGDEHVVALDSSGYV 344
            VV+V+ G  H V L ++G +
Sbjct: 149 KVVQVACGSAHTVGLTATGQI 169



 Score = 44.3 bits (103), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 41/162 (25%), Positives = 75/162 (46%), Gaps = 5/162 (3%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G  H L+++ S ++F+ G +  G LG G +  +    T +       +  ++  +
Sbjct: 203 VRVAAGADHNLVLTISGALFAWGCNSFGQLGVGDDQDRGAP-TLVKTLRNQGICALACGD 261

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFL 231
           +H+  + + G VFT G       GH  +N  +  PR V  L G    Q+  G   +  ++
Sbjct: 262 DHSLALTRDGGVFTFGAGMYGQLGHNTSNNELL-PRKVFELMGSSVTQIACGRKHSIAYV 320

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGSVV 272
              G V+  G   +GQLG G T++R +P  +  P    G+ V
Sbjct: 321 PSSGRVYVFGLGGNGQLGTGSTVNRMSPAMVKGPFVAFGAEV 362


>gi|219125443|ref|XP_002182991.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217405785|gb|EEC45727.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 341

 Score =  103 bits (258), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 77/264 (29%), Positives = 127/264 (48%), Gaps = 15/264 (5%)

Query: 83  LNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLIS-NSSVFSCGSSLCGV 141
           L   +  WK V R  QS+  +  IV      +Q+T G YHT  ++ N  +++ G  + G 
Sbjct: 65  LGHGDNGWKYVPRMTQSL--AGQIV------LQVTCGSYHTAAVTGNGDLYTWGGGMYGK 116

Query: 142 LGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN 201
           LGHG E        R+     A V Q++    H A V  SG ++T GD  +   GH +T 
Sbjct: 117 LGHGDEAGHATP-KRVEALVGATVAQIACGSRHTAIVTASGALYTWGDKENGVAGHGETE 175

Query: 202 RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 261
              + PRL+E++      Q++A    T  +T  G + T G    G+LGH    +  +P  
Sbjct: 176 GHQYLPRLLESMAAKRVAQISACGFHTAIVTDAGELFTWGEGKFGRLGHMSERNCHSPTI 235

Query: 262 IAPLEEVGSVV-QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR 320
           +  +  VG    Q++ G  +   V+ +G +Y+FG G +  LGH ++ +++ P  ++    
Sbjct: 236 VDYM--VGKKPRQVSCGGFHTAVVSEDGRLYTFGGGEHGQLGHNDRVNKMTPTFVEAL-- 291

Query: 321 KGIHVVRVSAGDEHVVALDSSGYV 344
            G+ V +++ G  H VAL   G V
Sbjct: 292 DGMFVSQITCGWSHSVALTVKGLV 315



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/215 (32%), Positives = 104/215 (48%), Gaps = 8/215 (3%)

Query: 130 SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 189
           +VF+ G    G LG G +T+     T ++      V Q++    H   +   G+VFT G 
Sbjct: 1   AVFTWGRGEDGQLGLG-DTSDQDEPTYVDALRGVGVQQIACGSGHTVVLTTDGEVFTWGR 59

Query: 190 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
                 GH D N   + PR+ ++L G    QVT G   T  +T  G ++T G   +G+LG
Sbjct: 60  GDDGRLGHGD-NGWKYVPRMTQSLAGQIVLQVTCGSYHTAAVTGNGDLYTWGGGMYGKLG 118

Query: 250 HGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QH 307
           HGD     TPK +  L  VG +V QIA G  +   VT +G +Y++G   N   GHGE + 
Sbjct: 119 HGDEAGHATPKRVEAL--VGATVAQIACGSRHTAIVTASGALYTWGDKENGVAGHGETEG 176

Query: 308 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            +  PR +++   K   V ++SA   H   +  +G
Sbjct: 177 HQYLPRLLESMAAK--RVAQISACGFHTAIVTDAG 209



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 78/149 (52%), Gaps = 3/149 (2%)

Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI+   +HT +++++  +F+ G    G LGH  E   C S T +++       QVS    
Sbjct: 194 QISACGFHTAIVTDAGELFTWGEGKFGRLGHMSER-NCHSPTIVDYMVGKKPRQVSCGGF 252

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H A V + G+++T G       GH D    +  P  VEAL G+   Q+T G + +  LT+
Sbjct: 253 HTAVVSEDGRLYTFGGGEHGQLGHNDRVNKM-TPTFVEALDGMFVSQITCGWSHSVALTV 311

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           +G V+T G+  HG+LGHG+      P+++
Sbjct: 312 KGLVYTWGNGDHGKLGHGNGRKVAVPQAV 340


>gi|402874536|ref|XP_003901091.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Papio
           anubis]
          Length = 651

 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 125/237 (52%), Gaps = 13/237 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSL 346
           V+SFG G N  LGHG+ +   +P+ I+    +G+ + +V AG +  +AL S+G V L
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEAL--QGMFIRKVCAGSQSSLALTSTGQVGL 637



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 84/189 (44%), Gaps = 14/189 (7%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSG 342
           H +AL   G
Sbjct: 572 HTIALSKDG 580


>gi|170062906|ref|XP_001866871.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
 gi|167880719|gb|EDS44102.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
          Length = 679

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/217 (31%), Positives = 115/217 (52%), Gaps = 4/217 (1%)

Query: 130 SVFSCGSSLCGVLG-HGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
           +++  GS++ G LG  G E  Q ++   +++  AA+V Q +   +H   + + G+++TCG
Sbjct: 2   ALYCWGSTVHGELGLGGIEEEQVMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLYTCG 61

Query: 189 DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 248
           +N     GH   N P  RP+ + AL+     QV+ GL+ +  LT  G + + GSN  GQL
Sbjct: 62  NNDHGQLGHDTNNLPNKRPQFISALENYIVTQVSCGLSHSLALTNWGQLFSWGSNATGQL 121

Query: 249 GHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 307
           GH  D +  P P+ I  +    +VVQI+ G S+ LA+T +G ++++G+     LG G   
Sbjct: 122 GHDLDMVSYPAPRMIKSI-ATKTVVQISCGHSHCLALTNSGELFAWGANEYGQLGLGTTG 180

Query: 308 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            ++ P A       GI +  ++ G  H  A+  SG +
Sbjct: 181 KKV-PTATLVKSLAGIPIAFIACGGNHSFAVSKSGAI 216



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 109/225 (48%), Gaps = 4/225 (1%)

Query: 115 QITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q++ G  H+L ++N   +FS GS+  G LGH  +     +   I   +   VVQ+S   +
Sbjct: 93  QVSCGLSHSLALTNWGQLFSWGSNATGQLGHDLDMVSYPAPRMIKSIATKTVVQISCGHS 152

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H   +  SG++F  G N     G   T + +    LV++L G+P   +  G N +  ++ 
Sbjct: 153 HCLALTNSGELFAWGANEYGQLGLGTTGKKVPTATLVKSLAGIPIAFIACGGNHSFAVSK 212

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G +   G NT GQLG  D   R  P  +  L  +G V  I+ G  + + +T  G V++ 
Sbjct: 213 SGAIFGWGKNTFGQLGLNDLDSRCYPTQLKTLRSLG-VRYISCGDDFSVFLTQEGGVFTC 271

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           G G+   LGHG   +E+ PR +  F   G  + +++ G +H +A 
Sbjct: 272 GLGTFGQLGHGTHGNEILPRMV--FELMGSKITQIACGRKHTLAF 314



 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 69/243 (28%), Positives = 115/243 (47%), Gaps = 11/243 (4%)

Query: 110 SAGNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH---V 165
           +A   Q   G  HTLL++ +  +++CG++  G LGH    T  +   R  F SA     V
Sbjct: 35  AANVQQAACGGSHTLLLTKDGKLYTCGNNDHGQLGH---DTNNLPNKRPQFISALENYIV 91

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            QVS   +H+  +   GQ+F+ G N++   GH         PR+++++      Q++ G 
Sbjct: 92  TQVSCGLSHSLALTNWGQLFSWGSNATGQLGHDLDMVSYPAPRMIKSIATKTVVQISCGH 151

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
           +    LT  G +   G+N +GQLG G T  + PT   +  L  +  +  IA G ++  AV
Sbjct: 152 SHCLALTNSGELFAWGANEYGQLGLGTTGKKVPTATLVKSLAGI-PIAFIACGGNHSFAV 210

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           + +G ++ +G  +   LG  +      P  ++T R  G+    +S GD+  V L   G V
Sbjct: 211 SKSGAIFGWGKNTFGQLGLNDLDSRCYPTQLKTLRSLGVRY--ISCGDDFSVFLTQEGGV 268

Query: 345 SLC 347
             C
Sbjct: 269 FTC 271



 Score = 43.5 bits (101), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 37/125 (29%), Positives = 57/125 (45%), Gaps = 4/125 (3%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G  H+  +S S ++F  G +  G LG     ++C   T++    +  V  +S  ++ 
Sbjct: 200 IACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLDSRCYP-TQLKTLRSLGVRYISCGDDF 258

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFLTI 233
           + F+ Q G VFTCG  +    GH      I  PR+V  L G    Q+  G   T  F+  
Sbjct: 259 SVFLTQEGGVFTCGLGTFGQLGHGTHGNEIL-PRMVFELMGSKITQIACGRKHTLAFVPS 317

Query: 234 RGHVH 238
           RG V+
Sbjct: 318 RGKVY 322


>gi|299471207|emb|CBN79063.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 513

 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 78/271 (28%), Positives = 126/271 (46%), Gaps = 28/271 (10%)

Query: 83  LNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGV 141
           L   +  WK V R ++++E    +        Q T G YHT  +++   +++ G  + G 
Sbjct: 72  LGHGDNGWKYVPRIVEALEGQRIV--------QATCGSYHTAAVTDKGELYTWGGGMYGK 123

Query: 142 LGHGPET---TQC-VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH 197
           LGHG E+   T C V   R      A V Q++    H   +   G+V+T GD  +   GH
Sbjct: 124 LGHGNESGHPTPCMVKHLR---DEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGH 180

Query: 198 RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP 257
            + +   + PR++E+L+     QV A    T  LT  G + T G    G+LGHG   ++ 
Sbjct: 181 TNADGHQYLPRMLESLQAKTVTQVAACGFHTAALTAAGEIFTWGEGKFGRLGHGMERNQM 240

Query: 258 TPKSIAPL--EEVG--------SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 307
            P+ +  L  + VG        S   + +G  Y      +G VY+FG+G +  LGHG+  
Sbjct: 241 VPRMVEALMGKRVGHVACGGFHSAAILDSGELYTWGGGEHGQVYTFGNGDHGKLGHGDVR 300

Query: 308 DELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
               P  +    +  +HVV+V++ +EH  AL
Sbjct: 301 KVSVPTLVAGLVK--MHVVKVASYNEHTAAL 329



 Score = 94.7 bits (234), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 71/217 (32%), Positives = 108/217 (49%), Gaps = 8/217 (3%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
           V+S G    G LG G    Q      ++   +  VVQV+    H   + + G V+T G  
Sbjct: 9   VYSWGRGEDGQLGLGDTNDQDRPVL-VDALKSKGVVQVACGSGHTVVLSEDGAVYTWGRG 67

Query: 191 SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH 250
                GH D N   + PR+VEAL+G    Q T G   T  +T +G ++T G   +G+LGH
Sbjct: 68  DDGRLGHGD-NGWKYVPRIVEALEGQRIVQATCGSYHTAAVTDKGELYTWGGGMYGKLGH 126

Query: 251 GDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH--GEQH 307
           G+    PTP  +  L + G+ V QIA G  + + +T  G VY++G   N  +GH   + H
Sbjct: 127 GNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGHTNADGH 186

Query: 308 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             L PR +++ + K   V +V+A   H  AL ++G +
Sbjct: 187 QYL-PRMLESLQAK--TVTQVAACGFHTAALTAAGEI 220



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/164 (34%), Positives = 78/164 (47%), Gaps = 2/164 (1%)

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           +G V++ G       G  DTN    RP LV+ALK     QV  G   T  L+  G V+T 
Sbjct: 6   AGLVYSWGRGEDGQLGLGDTNDQD-RPVLVDALKSKGVVQVACGSGHTVVLSEDGAVYTW 64

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
           G    G+LGHGD   +  P+ +  LE    +VQ   G  +  AVT  G +Y++G G    
Sbjct: 65  GRGDDGRLGHGDNGWKYVPRIVEALEGQ-RIVQATCGSYHTAAVTDKGELYTWGGGMYGK 123

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           LGHG +     P  ++  R +G  V +++ G  H V L   G V
Sbjct: 124 LGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKV 167



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 60/110 (54%), Gaps = 3/110 (2%)

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
           + G V++ G    GQLG GDT D+  P  +  L+  G VVQ+A G  + + ++ +G VY+
Sbjct: 5   VAGLVYSWGRGEDGQLGLGDTNDQDRPVLVDALKSKG-VVQVACGSGHTVVLSEDGAVYT 63

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           +G G +  LGHG+   +  PR ++    +G  +V+ + G  H  A+   G
Sbjct: 64  WGRGDDGRLGHGDNGWKYVPRIVEAL--EGQRIVQATCGSYHTAAVTDKG 111


>gi|428178045|gb|EKX46922.1| hypothetical protein GUITHDRAFT_86569 [Guillardia theta CCMP2712]
          Length = 306

 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 75/230 (32%), Positives = 115/230 (50%), Gaps = 6/230 (2%)

Query: 115 QITTGRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCVSF-TRINFPSAAHVVQVSASE 172
           Q++ G  HT +L+ N  VF+ G    G LG G   T  VS    ++     HV QV+   
Sbjct: 43  QVSCGNQHTAILMENGEVFTFGRGNFGQLGQGASVTANVSTPALVSALQGKHVKQVACGW 102

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           +H   ++ +GQ++T G       GH D  R    P+LVE+L+G     V AG   +  + 
Sbjct: 103 HHTCALIDNGQLYTWGSGEYGRLGHGDEVRQA-SPKLVESLQGKEVTFVAAGGFHSSVII 161

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G++ T G    GQLGHGD  DR TPK +  +++     ++A G  + L +T +  V++
Sbjct: 162 EGGNLLTWGGGYFGQLGHGDETDRKTPKMVKGVQQC-IAHEVACGTHHTLMLTQSQEVWT 220

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           +GSG    LG G++    +P  I     +G+ V+ +S G  H  AL S G
Sbjct: 221 WGSGEFGKLGIGDEEKHAEPIMITAL--QGVGVIHISTGGFHSAALTSEG 268



 Score = 94.4 bits (233), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 71/221 (32%), Positives = 107/221 (48%), Gaps = 15/221 (6%)

Query: 127 SNSSVFSCGSSLCGVLGHGPETTQ-----CVSFTRINFPSAAHVVQVSASENHAAFVLQS 181
             S V+S G  + G LGHG E TQ      V+F   N      V QVS    H A ++++
Sbjct: 4   EGSEVYSWGQGVLGQLGHGDEKTQRQPRLVVAFLGFN------VRQVSCGNQHTAILMEN 57

Query: 182 GQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           G+VFT G  +    G        +  P LV AL+G   KQV  G + T  L   G ++T 
Sbjct: 58  GEVFTFGRGNFGQLGQGASVTANVSTPALVSALQGKHVKQVACGWHHTCALIDNGQLYTW 117

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
           GS  +G+LGHGD + + +PK +  L+    V  +AAG  +   +   G + ++G G    
Sbjct: 118 GSGEYGRLGHGDEVRQASPKLVESLQGK-EVTFVAAGGFHSSVIIEGGNLLTWGGGYFGQ 176

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           LGHG++ D   P+ ++  ++   H   V+ G  H + L  S
Sbjct: 177 LGHGDETDRKTPKMVKGVQQCIAH--EVACGTHHTLMLTQS 215



 Score = 89.0 bits (219), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 101/206 (49%), Gaps = 6/206 (2%)

Query: 115 QITTGRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+  G +HT  LI N  +++ GS   G LGHG E  Q  S   +       V  V+A   
Sbjct: 97  QVACGWHHTCALIDNGQLYTWGSGEYGRLGHGDEVRQA-SPKLVESLQGKEVTFVAAGGF 155

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           H++ +++ G + T G       GH D T+R    P++V+ ++     +V  G + T  LT
Sbjct: 156 HSSVIIEGGNLLTWGGGYFGQLGHGDETDRKT--PKMVKGVQQCIAHEVACGTHHTLMLT 213

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
               V T GS   G+LG GD      P  I  L+ VG V+ I+ G  +  A+T  GV+Y+
Sbjct: 214 QSQEVWTWGSGEFGKLGIGDEEKHAEPIMITALQGVG-VIHISTGGFHSAALTSEGVLYT 272

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTF 318
           +G G    LGHG+++ +  P  ++  
Sbjct: 273 WGGGDKGQLGHGDENSQNIPVVVEVI 298


>gi|390341358|ref|XP_003725437.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
           [Strongylocentrotus purpuratus]
          Length = 658

 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 74/238 (31%), Positives = 119/238 (50%), Gaps = 10/238 (4%)

Query: 111 AGNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA--AHVVQ 167
           A + QI  G+Y T +IS + SV +CG    G LG G    Q     ++NF ++    +  
Sbjct: 406 AESQQIEAGQYCTFVISSDGSVRACGKGSYGRLGLGDSNNQ-TQLKKLNFDNSIITRISS 464

Query: 168 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
              S+ H   +   GQVF+ GD      GH +T    +   ++  L G     ++AG   
Sbjct: 465 SKGSDGHTLALTSEGQVFSWGDGDYGKLGHGNTLTQKYPKVILGVLMGKVVVCISAGYRH 524

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           +  +T  G ++T G   +G+LGHGD+  R  P  +  +  VG VV    G S+ +AV+ +
Sbjct: 525 SACVTDDGQLYTWGEGDYGRLGHGDSNSRNVPTLVKDVSNVGKVV---CGSSHTIAVSQD 581

Query: 288 G-VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              V+SFG G N  LGHG+ +   +P+ I++    G+ + +V  G +  +AL S+G V
Sbjct: 582 SRTVWSFGGGDNGKLGHGDTNRIYKPKIIESL--IGLFIKKVGCGSQSSLALTSTGQV 637



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 65/224 (29%), Positives = 104/224 (46%), Gaps = 15/224 (6%)

Query: 120 RYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           + ++L++S NS VF  GS+    L  G +    +    I+F   A   Q+ A + +  FV
Sbjct: 365 KPNSLVVSENSEVFVWGSNSSHQLAEGSQEKILLPKMAISF---AESQQIEAGQ-YCTFV 420

Query: 179 LQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF---LTIR 234
           + S G V  CG  S    G  D+N      +L          ++++     G    LT  
Sbjct: 421 ISSDGSVRACGKGSYGRLGLGDSNNQTQLKKL--NFDNSIITRISSSKGSDGHTLALTSE 478

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G V + G   +G+LGHG+TL +  PK I  +     VV I+AG  +   VT +G +Y++G
Sbjct: 479 GQVFSWGDGDYGKLGHGNTLTQKYPKVILGVLMGKVVVCISAGYRHSACVTDDGQLYTWG 538

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            G    LGHG+ +     R + T  +   +V +V  G  H +A+
Sbjct: 539 EGDYGRLGHGDSNS----RNVPTLVKDVSNVGKVVCGSSHTIAV 578


>gi|126649317|ref|XP_001388330.1| uvb-resistance protein uvr8 [Cryptosporidium parvum Iowa II]
 gi|32398856|emb|CAD98566.1| uvb-resistance protein uvr8, possible [Cryptosporidium parvum]
 gi|126117424|gb|EAZ51524.1| uvb-resistance protein uvr8, putative [Cryptosporidium parvum Iowa
           II]
          Length = 487

 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 72/235 (30%), Positives = 117/235 (49%), Gaps = 17/235 (7%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP------SAAHVVQVSASEN 173
           R+   ++SN  +++ G S  G LGHG +    +S   ++ P          V+QVS    
Sbjct: 102 RHTAAILSNGELYTWGCSKNGKLGHG-QFELSISNNVVSQPMKVKALEGEKVIQVSCGSY 160

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H   +    +  T G       GH DT + IF P+L+E+L G+P K+++ G + T  L +
Sbjct: 161 HTGCLTDDKKALTWGLGLQGRLGHGDT-QDIFTPKLIESLAGLPIKEISCGGHHTAILLV 219

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
            G ++  G    G+LG G T D   P+ +  PLE++  + +++ G  +  AVT  G VY+
Sbjct: 220 TGKLYMFGGGAFGKLGFGSTDDVLIPRLLEGPLEDI-QITKVSLGSQHSAAVTKCGKVYT 278

Query: 293 FGSGSNFCLGH---GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           +G G    LGH   G +HD L P+ +    +    +V +S G+ H VAL   G +
Sbjct: 279 WGQGGR--LGHIFNGPEHDFLSPKRLSNLEKA--FIVDISCGNSHSVALSDVGDI 329



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 76/236 (32%), Positives = 118/236 (50%), Gaps = 11/236 (4%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           +++ G  ++  I+NS  +   G   CG LG G     C+   R+N  S  +V+QV+ S+ 
Sbjct: 46  KVSCGSNYSAAITNSGDLILWGYGGCGQLGFG-NLEDCL-VPRVNL-SLKNVIQVACSDR 102

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRD-----TNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
           H A +L +G+++T G + +   GH       +N  + +P  V+AL+G    QV+ G   T
Sbjct: 103 HTAAILSNGELYTWGCSKNGKLGHGQFELSISNNVVSQPMKVKALEGEKVIQVSCGSYHT 162

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
           G LT      T G    G+LGHGDT D  TPK I  L  +  + +I+ G  +   +   G
Sbjct: 163 GCLTDDKKALTWGLGLQGRLGHGDTQDIFTPKLIESLAGL-PIKEISCGGHHTAILLVTG 221

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            +Y FG G+   LG G   D L PR ++    + I + +VS G +H  A+   G V
Sbjct: 222 KLYMFGGGAFGKLGFGSTDDVLIPRLLEG-PLEDIQITKVSLGSQHSAAVTKCGKV 276



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 66/135 (48%), Gaps = 12/135 (8%)

Query: 207 PRLVEALKGVP-CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 265
           P LV+ L+ +    +V+ G N++  +T  G +   G    GQLG G+  D   P+    L
Sbjct: 32  PHLVDGLRHLSSISKVSCGSNYSAAITNSGDLILWGYGGCGQLGFGNLEDCLVPRVNLSL 91

Query: 266 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL------QPRAIQTFR 319
           +   +V+Q+A    +  A+  NG +Y++G   N  LGHG+    +      QP  ++   
Sbjct: 92  K---NVIQVACSDRHTAAILSNGELYTWGCSKNGKLGHGQFELSISNNVVSQPMKVKAL- 147

Query: 320 RKGIHVVRVSAGDEH 334
            +G  V++VS G  H
Sbjct: 148 -EGEKVIQVSCGSYH 161



 Score = 44.3 bits (103), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 6/114 (5%)

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           V   GS  +GQ G       P P  +  L  + S+ +++ G +Y  A+T +G +  +G G
Sbjct: 10  VVVWGSTEYGQHGSKGEEVSPGPHLVDGLRHLSSISKVSCGSNYSAAITNSGDLILWGYG 69

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG--YVSLCS 348
               LG G   D L PR   + +    +V++V+  D H  A+ S+G  Y   CS
Sbjct: 70  GCGQLGFGNLEDCLVPRVNLSLK----NVIQVACSDRHTAAILSNGELYTWGCS 119



 Score = 39.7 bits (91), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 44/190 (23%), Positives = 84/190 (44%), Gaps = 9/190 (4%)

Query: 106 IVETSAG--NMQITTGRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRI-NFP- 160
           ++E+ AG    +I+ G +HT +L+    ++  G    G LG G  +T  V   R+   P 
Sbjct: 195 LIESLAGLPIKEISCGGHHTAILLVTGKLYMFGGGAFGKLGFG--STDDVLIPRLLEGPL 252

Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
               + +VS    H+A V + G+V+T G                  P+ +  L+      
Sbjct: 253 EDIQITKVSLGSQHSAAVTKCGKVYTWGQGGRLGHIFNGPEHDFLSPKRLSNLEKAFIVD 312

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           ++ G + +  L+  G ++T G   +  +GHG     P   S  P+ +  ++VQ+    S+
Sbjct: 313 ISCGNSHSVALSDVGDIYTWGMTKN--IGHGIQGIHPNMPSKHPILQNKNIVQVVCSSSH 370

Query: 281 MLAVTGNGVV 290
            +A++  G +
Sbjct: 371 SIALSDIGAL 380


>gi|67623229|ref|XP_667897.1| uvb-resistance protein uvr8 [Cryptosporidium hominis TU502]
 gi|54659070|gb|EAL37667.1| uvb-resistance protein uvr8 [Cryptosporidium hominis]
          Length = 487

 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 72/235 (30%), Positives = 117/235 (49%), Gaps = 17/235 (7%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP------SAAHVVQVSASEN 173
           R+   ++SN  +++ G S  G LGHG +    +S   ++ P          V+QVS    
Sbjct: 102 RHTAAILSNGELYTWGCSKNGKLGHG-QFELSISNNVVSQPMKVKALEGEKVIQVSCGSY 160

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H   +    +  T G       GH DT + IF P+L+E+L G+P K+++ G + T  L +
Sbjct: 161 HTGCLTDDKKALTWGLGLQGRLGHGDT-QDIFTPKLIESLAGLPIKEISCGGHHTAILLV 219

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
            G ++  G    G+LG G T D   P+ +  PLE++  + +++ G  +  AVT  G VY+
Sbjct: 220 TGKLYMFGGGAFGKLGFGSTDDVLIPRLLEGPLEDI-QITKVSLGSQHSAAVTKCGKVYT 278

Query: 293 FGSGSNFCLGH---GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           +G G    LGH   G +HD L P+ +    +    +V +S G+ H VAL   G +
Sbjct: 279 WGQGGR--LGHIFNGPEHDFLSPKRLSNLEKA--FIVDISCGNSHSVALSDVGDI 329



 Score = 94.4 bits (233), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 77/236 (32%), Positives = 118/236 (50%), Gaps = 11/236 (4%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           +++ G  ++  I+NS  +   G   CG LG G     C+   R+N  S  +VVQV+ S+ 
Sbjct: 46  KVSCGSNYSAAITNSGDLILWGYGGCGQLGFG-NLEDCL-VPRVNL-SLKNVVQVACSDR 102

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRD-----TNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
           H A +L +G+++T G + +   GH       +N  + +P  V+AL+G    QV+ G   T
Sbjct: 103 HTAAILSNGELYTWGCSKNGKLGHGQFELSISNNVVSQPMKVKALEGEKVIQVSCGSYHT 162

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
           G LT      T G    G+LGHGDT D  TPK I  L  +  + +I+ G  +   +   G
Sbjct: 163 GCLTDDKKALTWGLGLQGRLGHGDTQDIFTPKLIESLAGL-PIKEISCGGHHTAILLVTG 221

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            +Y FG G+   LG G   D L PR ++    + I + +VS G +H  A+   G V
Sbjct: 222 KLYMFGGGAFGKLGFGSTDDVLIPRLLEG-PLEDIQITKVSLGSQHSAAVTKCGKV 276



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 66/135 (48%), Gaps = 12/135 (8%)

Query: 207 PRLVEALKGVP-CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 265
           P LV+ L+ +    +V+ G N++  +T  G +   G    GQLG G+  D   P+    L
Sbjct: 32  PHLVDGLRHLSSISKVSCGSNYSAAITNSGDLILWGYGGCGQLGFGNLEDCLVPRVNLSL 91

Query: 266 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL------QPRAIQTFR 319
           +   +VVQ+A    +  A+  NG +Y++G   N  LGHG+    +      QP  ++   
Sbjct: 92  K---NVVQVACSDRHTAAILSNGELYTWGCSKNGKLGHGQFELSISNNVVSQPMKVKAL- 147

Query: 320 RKGIHVVRVSAGDEH 334
            +G  V++VS G  H
Sbjct: 148 -EGEKVIQVSCGSYH 161



 Score = 45.1 bits (105), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 55/114 (48%), Gaps = 6/114 (5%)

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           V   GS+ +GQ G       P P  +  L  + S+ +++ G +Y  A+T +G +  +G G
Sbjct: 10  VVVWGSSEYGQHGSKGEEVSPGPHLVDGLRHLSSISKVSCGSNYSAAITNSGDLILWGYG 69

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG--YVSLCS 348
               LG G   D L PR   + +    +VV+V+  D H  A+ S+G  Y   CS
Sbjct: 70  GCGQLGFGNLEDCLVPRVNLSLK----NVVQVACSDRHTAAILSNGELYTWGCS 119



 Score = 39.7 bits (91), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 44/190 (23%), Positives = 84/190 (44%), Gaps = 9/190 (4%)

Query: 106 IVETSAG--NMQITTGRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRI-NFP- 160
           ++E+ AG    +I+ G +HT +L+    ++  G    G LG G  +T  V   R+   P 
Sbjct: 195 LIESLAGLPIKEISCGGHHTAILLVTGKLYMFGGGAFGKLGFG--STDDVLIPRLLEGPL 252

Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
               + +VS    H+A V + G+V+T G                  P+ +  L+      
Sbjct: 253 EDIQITKVSLGSQHSAAVTKCGKVYTWGQGGRLGHIFNGPEHDFLSPKRLSNLEKAFIVD 312

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           ++ G + +  L+  G ++T G   +  +GHG     P   S  P+ +  ++VQ+    S+
Sbjct: 313 ISCGNSHSVALSDVGDIYTWGMTKN--IGHGIQGIHPNMPSKHPILQNKNIVQVVCSSSH 370

Query: 281 MLAVTGNGVV 290
            +A++  G +
Sbjct: 371 SIALSDIGAL 380


>gi|170060307|ref|XP_001865743.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
 gi|167878807|gb|EDS42190.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
          Length = 1063

 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 68/217 (31%), Positives = 115/217 (52%), Gaps = 4/217 (1%)

Query: 130 SVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
           +++  GS++ G LG G  E  Q ++   +++  AA+V Q +   +H   + + G+++TCG
Sbjct: 2   ALYCWGSTVHGELGLGGIEEEQVMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLYTCG 61

Query: 189 DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 248
           +N     GH   N P  RP+ + AL+     QV+ GL+ +  LT  G + + GSN  GQL
Sbjct: 62  NNDHGQLGHDTNNLPNKRPQFISALENYIVTQVSCGLSHSLALTNWGQLFSWGSNATGQL 121

Query: 249 GHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 307
           GH  D +  P P+ I  +    +VVQI+ G S+ LA+T +G ++++G+     LG G   
Sbjct: 122 GHDLDMVSYPAPRMIKSI-ATKTVVQISCGHSHCLALTNSGELFAWGANEYGQLGLGTTG 180

Query: 308 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            ++ P A       GI +  ++ G  H  A+  SG +
Sbjct: 181 KKV-PTATLVKSLAGIPIAFIACGGNHSFAVSKSGAI 216



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 109/225 (48%), Gaps = 4/225 (1%)

Query: 115 QITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q++ G  H+L ++N   +FS GS+  G LGH  +     +   I   +   VVQ+S   +
Sbjct: 93  QVSCGLSHSLALTNWGQLFSWGSNATGQLGHDLDMVSYPAPRMIKSIATKTVVQISCGHS 152

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H   +  SG++F  G N     G   T + +    LV++L G+P   +  G N +  ++ 
Sbjct: 153 HCLALTNSGELFAWGANEYGQLGLGTTGKKVPTATLVKSLAGIPIAFIACGGNHSFAVSK 212

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G +   G NT GQLG  D   R  P  +  L  +G V  I+ G  + + +T  G V++ 
Sbjct: 213 SGAIFGWGKNTFGQLGLNDLDSRCYPTQLKTLRSLG-VRYISCGDDFSVFLTQEGGVFTC 271

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           G G+   LGHG   +E+ PR +  F   G  + +++ G +H +A 
Sbjct: 272 GLGTFGQLGHGTHGNEILPRMV--FELMGSKITQIACGRKHTLAF 314



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/243 (28%), Positives = 115/243 (47%), Gaps = 11/243 (4%)

Query: 110 SAGNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH---V 165
           +A   Q   G  HTLL++ +  +++CG++  G LGH    T  +   R  F SA     V
Sbjct: 35  AANVQQAACGGSHTLLLTKDGKLYTCGNNDHGQLGHD---TNNLPNKRPQFISALENYIV 91

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            QVS   +H+  +   GQ+F+ G N++   GH         PR+++++      Q++ G 
Sbjct: 92  TQVSCGLSHSLALTNWGQLFSWGSNATGQLGHDLDMVSYPAPRMIKSIATKTVVQISCGH 151

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
           +    LT  G +   G+N +GQLG G T  + PT   +  L  +  +  IA G ++  AV
Sbjct: 152 SHCLALTNSGELFAWGANEYGQLGLGTTGKKVPTATLVKSLAGI-PIAFIACGGNHSFAV 210

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           + +G ++ +G  +   LG  +      P  ++T R  G+    +S GD+  V L   G V
Sbjct: 211 SKSGAIFGWGKNTFGQLGLNDLDSRCYPTQLKTLRSLGVRY--ISCGDDFSVFLTQEGGV 268

Query: 345 SLC 347
             C
Sbjct: 269 FTC 271



 Score = 43.9 bits (102), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 37/125 (29%), Positives = 57/125 (45%), Gaps = 4/125 (3%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G  H+  +S S ++F  G +  G LG     ++C   T++    +  V  +S  ++ 
Sbjct: 200 IACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLDSRCYP-TQLKTLRSLGVRYISCGDDF 258

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFLTI 233
           + F+ Q G VFTCG  +    GH      I  PR+V  L G    Q+  G   T  F+  
Sbjct: 259 SVFLTQEGGVFTCGLGTFGQLGHGTHGNEIL-PRMVFELMGSKITQIACGRKHTLAFVPS 317

Query: 234 RGHVH 238
           RG V+
Sbjct: 318 RGKVY 322


>gi|156365518|ref|XP_001626692.1| predicted protein [Nematostella vectensis]
 gi|156213578|gb|EDO34592.1| predicted protein [Nematostella vectensis]
          Length = 1056

 Score =  102 bits (253), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 78/234 (33%), Positives = 118/234 (50%), Gaps = 7/234 (2%)

Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH--VVQVSAS 171
           ++T G+ HT+ +S+   VF+ G +  G +G G +  + V          A   VVQ++  
Sbjct: 89  KVTCGKAHTVAVSDQGLVFAWGDNSYGQIGLGSKVKEKVQTIPKMLKGLAKMSVVQIACG 148

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
            NH+  +  SG +F  GDNSS   G   T+  +  P  V +L GVP   ++AG   +  L
Sbjct: 149 CNHSMALTISGHLFCWGDNSSGQLGIGKTHSSMSEPAPVLSLNGVPFMLISAGGAHSFAL 208

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           +  G +   G N +GQLG  DT DRP P  +  L   G V  ++ G  +   +T +G V+
Sbjct: 209 SSSGALFGWGKNEYGQLGVHDTTDRPLPTLLKSLRSQG-VCYVSCGEKHTAVLTSDGGVF 267

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYV 344
           +FG G++  LGH   H E  PR +  F   G  V +++ G  H +AL  SSG V
Sbjct: 268 TFGCGTSGQLGHNSNHHEYTPRKV--FELMGSVVTQIACGRAHTLALVPSSGRV 319



 Score = 84.3 bits (207), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 111/218 (50%), Gaps = 12/218 (5%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRI--NFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
           +F  G    G LG G    + +S  R+  N   +++V +VS   NH AF+ + G V+TCG
Sbjct: 1   MFCWGKCSEGQLGVGETEQEFISTPRLLENLEFSSNVREVSCGWNHTAFLCKDGTVYTCG 60

Query: 189 DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 248
            N     G   ++     P  V A++     +VT G   T  ++ +G V   G N++GQ+
Sbjct: 61  SNEFGQLGQEKSHT---NPESVHAIETFTITKVTCGKAHTVAVSDQGLVFAWGDNSYGQI 117

Query: 249 GHGDTLDRPT---PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
           G G  +       PK +  L ++ SVVQIA G ++ +A+T +G ++ +G  S+  LG G+
Sbjct: 118 GLGSKVKEKVQTIPKMLKGLAKM-SVVQIACGCNHSMALTISGHLFCWGDNSSGQLGIGK 176

Query: 306 QHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            H  + +P  + +    G+  + +SAG  H  AL SSG
Sbjct: 177 THSSMSEPAPVLSL--NGVPFMLISAGGAHSFALSSSG 212



 Score = 64.7 bits (156), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 48/147 (32%), Positives = 81/147 (55%), Gaps = 13/147 (8%)

Query: 204 IFRPRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           I  PRL+E L+     ++V+ G N T FL   G V+TCGSN  GQLG   +     P+S+
Sbjct: 22  ISTPRLLENLEFSSNVREVSCGWNHTAFLCKDGTVYTCGSNEFGQLGQEKS--HTNPESV 79

Query: 263 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR-- 320
             +E   ++ ++  G ++ +AV+  G+V+++G  S   +G G +  E     +QT  +  
Sbjct: 80  HAIETF-TITKVTCGKAHTVAVSDQGLVFAWGDNSYGQIGLGSKVKE----KVQTIPKML 134

Query: 321 KGI---HVVRVSAGDEHVVALDSSGYV 344
           KG+    VV+++ G  H +AL  SG++
Sbjct: 135 KGLAKMSVVQIACGCNHSMALTISGHL 161



 Score = 46.2 bits (108), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 89/204 (43%), Gaps = 16/204 (7%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           M I+ G  H+  +S+S ++F  G +  G LG    T + +  T +    +  V  VS  E
Sbjct: 196 MLISAGGAHSFALSSSGALFGWGKNEYGQLGVHDTTDRPLP-TLLKSLRSQGVCYVSCGE 254

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFL 231
            H A +   G VFT G  +S   GH ++N   + PR V  L G    Q+  G   T   +
Sbjct: 255 KHTAVLTSDGGVFTFGCGTSGQLGH-NSNHHEYTPRKVFELMGSVVTQIACGRAHTLALV 313

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
              G V+T G    GQLG G T +       +P+   G  ++     S +    G+ VVY
Sbjct: 314 PSSGRVYTFGRGGDGQLGLGVTNN-----CNSPMTAKGPWLRSNNIKSMLPEADGDSVVY 368

Query: 292 S---FGSGSNFCLG----HGEQHD 308
           +     +G + C      +G++ D
Sbjct: 369 TVRRIDAGGDHCFAMASSYGDETD 392


>gi|158286476|ref|XP_308776.4| AGAP006994-PA [Anopheles gambiae str. PEST]
 gi|157020486|gb|EAA04764.5| AGAP006994-PA [Anopheles gambiae str. PEST]
          Length = 1055

 Score =  101 bits (252), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 69/224 (30%), Positives = 113/224 (50%), Gaps = 4/224 (1%)

Query: 116 ITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I+ G  H+L ++N   VFS GS+  G LGH  E  +  +   I    A HVVQ+++ + H
Sbjct: 94  ISCGTAHSLALTNWGQVFSWGSNAVGQLGHDAENGRQPTPRMIKAIGAKHVVQIASGQYH 153

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              +  +G+++  G NS    G   T+  +  P L+++L GVP   +  G N +  ++  
Sbjct: 154 CLALTNNGELYAWGSNSYGQLGIGTTSEKVPMPTLIQSLAGVPIAFIACGGNHSFAVSKS 213

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G +   G NT GQLG  D   R  P  +  L  +G V  I+ G  + + +T  G V++ G
Sbjct: 214 GAIFGWGKNTFGQLGLNDLNSRCYPTQLRTLRSLG-VRYISCGDDFSVFLTNEGGVFTCG 272

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           +G+   LGHG   +E+ PR +  F   G  + +++ G  H +A 
Sbjct: 273 AGTFGQLGHGSCSNEIVPRKV--FELMGSKITQIACGRRHTLAF 314



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 67/218 (30%), Positives = 113/218 (51%), Gaps = 6/218 (2%)

Query: 130 SVFSCGSSLCGVLG-HGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
           +++  G++  G LG  G E  Q +   ++++  A  VV+V    +H  F+ + G+++ CG
Sbjct: 2   AIYCWGNTAHGELGLGGIEEEQVMVPRKMDWSQADEVVRVECGTSHTLFLTKEGKMYACG 61

Query: 189 DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 248
           +N     GH     P  RP+ + +L+      ++ G   +  LT  G V + GSN  GQL
Sbjct: 62  NNDHGQLGHDLDTLPNKRPQRLTSLENYIITCISCGTAHSLALTNWGQVFSWGSNAVGQL 121

Query: 249 GH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 307
           GH  +   +PTP+ I  +     VVQIA+G  + LA+T NG +Y++GS S   LG G   
Sbjct: 122 GHDAENGRQPTPRMIKAI-GAKHVVQIASGQYHCLALTNNGELYAWGSNSYGQLGIGTTS 180

Query: 308 DEL-QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           +++  P  IQ+    G+ +  ++ G  H  A+  SG +
Sbjct: 181 EKVPMPTLIQSL--AGVPIAFIACGGNHSFAVSKSGAI 216



 Score = 87.8 bits (216), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 105/206 (50%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QI +G+YH L L +N  +++ GS+  G LG G  + +    T I   +   +  ++   
Sbjct: 145 VQIASGQYHCLALTNNGELYAWGSNSYGQLGIGTTSEKVPMPTLIQSLAGVPIAFIACGG 204

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           NH+  V +SG +F  G N+    G  D N   + P  +  L+ +  + ++ G +F+ FLT
Sbjct: 205 NHSFAVSKSGAIFGWGKNTFGQLGLNDLNSRCY-PTQLRTLRSLGVRYISCGDDFSVFLT 263

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGNGVV 290
             G V TCG+ T GQLGHG   +   P+ +   E +GS + QIA G  + LA V   G +
Sbjct: 264 NEGGVFTCGAGTFGQLGHGSCSNEIVPRKV--FELMGSKITQIACGRRHTLAFVPSRGKI 321

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           Y FG G    LG G   +   P+ ++
Sbjct: 322 YGFGLGGVGQLGIGMVGNHSTPQIVR 347



 Score = 85.1 bits (209), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 66/236 (27%), Positives = 113/236 (47%), Gaps = 5/236 (2%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G  HTL ++    +++CG++  G LGH  +T       R+       +  +S   
Sbjct: 39  VRVECGTSHTLFLTKEGKMYACGNNDHGQLGHDLDTLPNKRPQRLTSLENYIITCISCGT 98

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +   GQVF+ G N+    GH   N     PR+++A+      Q+ +G      LT
Sbjct: 99  AHSLALTNWGQVFSWGSNAVGQLGHDAENGRQPTPRMIKAIGAKHVVQIASGQYHCLALT 158

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
             G ++  GSN++GQLG G T ++ P P  I  L  V  +  IA G ++  AV+ +G ++
Sbjct: 159 NNGELYAWGSNSYGQLGIGTTSEKVPMPTLIQSLAGV-PIAFIACGGNHSFAVSKSGAIF 217

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSLC 347
            +G  +   LG  + +    P  ++T R  G+    +S GD+  V L + G V  C
Sbjct: 218 GWGKNTFGQLGLNDLNSRCYPTQLRTLRSLGVRY--ISCGDDFSVFLTNEGGVFTC 271


>gi|390341372|ref|XP_794518.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
           [Strongylocentrotus purpuratus]
          Length = 657

 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 75/242 (30%), Positives = 121/242 (50%), Gaps = 12/242 (4%)

Query: 111 AGNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA--AHVVQ 167
           A + QI  G+Y T +IS + SV +CG    G LG G    Q     ++NF ++    +  
Sbjct: 406 AESQQIEAGQYCTFVISSDGSVRACGKGSYGRLGLGDSNNQ-TQLKKLNFDNSIITRISS 464

Query: 168 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
              S+ H   +   GQVF+ GD      GH +T    +   ++  L G     ++AG   
Sbjct: 465 SKGSDGHTLALTSEGQVFSWGDGDYGKLGHGNTLTQKYPKVILGVLMGKVVVCISAGYRH 524

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           +  +T  G ++T G   +G+LGHGD+  R  P  +  +  VG VV    G S+ +AV+ +
Sbjct: 525 SACVTDDGQLYTWGEGDYGRLGHGDSNSRNVPTLVKDVSNVGKVV---CGSSHTIAVSQD 581

Query: 288 G-VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSL 346
              V+SFG G N  LGHG+ +   +P+ I++    G+ + +V  G +  +AL S+G   L
Sbjct: 582 SRTVWSFGGGDNGKLGHGDTNRIYKPKIIESL--IGLFIKKVGCGSQSSLALTSTG--QL 637

Query: 347 CS 348
           C+
Sbjct: 638 CT 639



 Score = 65.1 bits (157), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 65/224 (29%), Positives = 104/224 (46%), Gaps = 15/224 (6%)

Query: 120 RYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           + ++L++S NS VF  GS+    L  G +    +    I+F   A   Q+ A + +  FV
Sbjct: 365 KPNSLVVSENSEVFVWGSNSSHQLAEGSQEKILLPKMAISF---AESQQIEAGQ-YCTFV 420

Query: 179 LQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF---LTIR 234
           + S G V  CG  S    G  D+N      +L          ++++     G    LT  
Sbjct: 421 ISSDGSVRACGKGSYGRLGLGDSNNQTQLKKL--NFDNSIITRISSSKGSDGHTLALTSE 478

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G V + G   +G+LGHG+TL +  PK I  +     VV I+AG  +   VT +G +Y++G
Sbjct: 479 GQVFSWGDGDYGKLGHGNTLTQKYPKVILGVLMGKVVVCISAGYRHSACVTDDGQLYTWG 538

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            G    LGHG+ +     R + T  +   +V +V  G  H +A+
Sbjct: 539 EGDYGRLGHGDSNS----RNVPTLVKDVSNVGKVVCGSSHTIAV 578


>gi|158286478|ref|XP_001688080.1| AGAP006994-PB [Anopheles gambiae str. PEST]
 gi|157020487|gb|EDO64729.1| AGAP006994-PB [Anopheles gambiae str. PEST]
          Length = 1060

 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 69/224 (30%), Positives = 113/224 (50%), Gaps = 4/224 (1%)

Query: 116 ITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I+ G  H+L ++N   VFS GS+  G LGH  E  +  +   I    A HVVQ+++ + H
Sbjct: 99  ISCGTAHSLALTNWGQVFSWGSNAVGQLGHDAENGRQPTPRMIKAIGAKHVVQIASGQYH 158

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              +  +G+++  G NS    G   T+  +  P L+++L GVP   +  G N +  ++  
Sbjct: 159 CLALTNNGELYAWGSNSYGQLGIGTTSEKVPMPTLIQSLAGVPIAFIACGGNHSFAVSKS 218

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G +   G NT GQLG  D   R  P  +  L  +G V  I+ G  + + +T  G V++ G
Sbjct: 219 GAIFGWGKNTFGQLGLNDLNSRCYPTQLRTLRSLG-VRYISCGDDFSVFLTNEGGVFTCG 277

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           +G+   LGHG   +E+ PR +  F   G  + +++ G  H +A 
Sbjct: 278 AGTFGQLGHGSCSNEIVPRKV--FELMGSKITQIACGRRHTLAF 319



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 68/223 (30%), Positives = 114/223 (51%), Gaps = 11/223 (4%)

Query: 130 SVFSCGSSLCGVLG-HGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
           +++  G++  G LG  G E  Q +   ++++  A  VV+V    +H  F+ + G+++ CG
Sbjct: 2   AIYCWGNTAHGELGLGGIEEEQVMVPRKMDWSQADEVVRVECGTSHTLFLTKEGKMYACG 61

Query: 189 DNSSFCCGHRDTNRPIFRPRL-----VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           +N     GH     P  RPR+     + +L+      ++ G   +  LT  G V + GSN
Sbjct: 62  NNDHGQLGHDLDTLPNKRPRMSRFKRLTSLENYIITCISCGTAHSLALTNWGQVFSWGSN 121

Query: 244 THGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
             GQLGH  +   +PTP+ I  +     VVQIA+G  + LA+T NG +Y++GS S   LG
Sbjct: 122 AVGQLGHDAENGRQPTPRMIKAI-GAKHVVQIASGQYHCLALTNNGELYAWGSNSYGQLG 180

Query: 303 HGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            G   +++  P  IQ+    G+ +  ++ G  H  A+  SG +
Sbjct: 181 IGTTSEKVPMPTLIQSL--AGVPIAFIACGGNHSFAVSKSGAI 221



 Score = 87.8 bits (216), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 105/206 (50%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QI +G+YH L L +N  +++ GS+  G LG G  + +    T I   +   +  ++   
Sbjct: 150 VQIASGQYHCLALTNNGELYAWGSNSYGQLGIGTTSEKVPMPTLIQSLAGVPIAFIACGG 209

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           NH+  V +SG +F  G N+    G  D N   + P  +  L+ +  + ++ G +F+ FLT
Sbjct: 210 NHSFAVSKSGAIFGWGKNTFGQLGLNDLNSRCY-PTQLRTLRSLGVRYISCGDDFSVFLT 268

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGNGVV 290
             G V TCG+ T GQLGHG   +   P+ +   E +GS + QIA G  + LA V   G +
Sbjct: 269 NEGGVFTCGAGTFGQLGHGSCSNEIVPRKV--FELMGSKITQIACGRRHTLAFVPSRGKI 326

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           Y FG G    LG G   +   P+ ++
Sbjct: 327 YGFGLGGVGQLGIGMVGNHSTPQIVR 352



 Score = 84.7 bits (208), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 67/241 (27%), Positives = 115/241 (47%), Gaps = 10/241 (4%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPET-----TQCVSFTRINFPSAAHVVQ 167
           +++  G  HTL ++    +++CG++  G LGH  +T      +   F R+       +  
Sbjct: 39  VRVECGTSHTLFLTKEGKMYACGNNDHGQLGHDLDTLPNKRPRMSRFKRLTSLENYIITC 98

Query: 168 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
           +S    H+  +   GQVF+ G N+    GH   N     PR+++A+      Q+ +G   
Sbjct: 99  ISCGTAHSLALTNWGQVFSWGSNAVGQLGHDAENGRQPTPRMIKAIGAKHVVQIASGQYH 158

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
              LT  G ++  GSN++GQLG G T ++ P P  I  L  V  +  IA G ++  AV+ 
Sbjct: 159 CLALTNNGELYAWGSNSYGQLGIGTTSEKVPMPTLIQSLAGV-PIAFIACGGNHSFAVSK 217

Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSL 346
           +G ++ +G  +   LG  + +    P  ++T R  G+    +S GD+  V L + G V  
Sbjct: 218 SGAIFGWGKNTFGQLGLNDLNSRCYPTQLRTLRSLGVRY--ISCGDDFSVFLTNEGGVFT 275

Query: 347 C 347
           C
Sbjct: 276 C 276


>gi|229442453|gb|AAI72909.1| guanine nucleotide exchange factor p532 [synthetic construct]
          Length = 2440

 Score =  101 bits (251), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 73/235 (31%), Positives = 124/235 (52%), Gaps = 13/235 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           V+SFG G N  LGHG+ +   +P+ I+    +G+ + +V AG +  +AL S+G V
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEAL--QGMFIRKVCAGSQSSLALTSTGQV 635



 Score = 85.1 bits (209), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 80/222 (36%), Positives = 113/222 (50%), Gaps = 15/222 (6%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 298 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             CLG G  +   L+P+ I+        +V VS GD H +AL
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLAL 680



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 110/234 (47%), Gaps = 38/234 (16%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS----AAHVVQVSASENHA 175
           R+   +  +  +++ G    G LGHG   ++       N P+     ++V +VS   +H 
Sbjct: 521 RHSAAVTEDGELYTWGEGDFGRLGHGDSNSR-------NIPTLVKDISNVGEVSCGSSHT 573

Query: 176 AFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             + + G+    F  GDN     GH DTNR +++P+++EAL+G+  ++V AG   +  LT
Sbjct: 574 IALSKDGRTVWSFGGGDNGKL--GHGDTNR-VYKPKVIEALQGMFIRKVCAGSQSSLALT 630

Query: 233 IRGHVHT--------CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             G V+         CGS+    L          PK I  L     +V ++ G S+ LA+
Sbjct: 631 STGQVYAWGCGACLGCGSSEATAL---------RPKLIEELAAT-RIVDVSIGDSHCLAL 680

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           + +  VY++G+ S    G G     + +P+ +      GI + ++SAG  H +A
Sbjct: 681 SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGL--DGIAIQQISAGTSHSLA 732



 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 84/189 (44%), Gaps = 14/189 (7%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSG 342
           H +AL   G
Sbjct: 572 HTIALSKDG 580



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 84/175 (48%), Gaps = 7/175 (4%)

Query: 115 QITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++ G  HT+ +S    +V+S G    G LGHG +T +      I       + +V A  
Sbjct: 565 EVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEALQGMFIRKVCAGS 623

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             +  +  +GQV+  G  +   CG  +      RP+L+E L       V+ G +    L+
Sbjct: 624 QSSLALTSTGQVYAWGCGACLGCGSSEAT--ALRPKLIEELAATRIVDVSIGDSHCLALS 681

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
               V+  G+N+ GQ G G++    T PK ++ L+ + ++ QI+AG S+ LA T 
Sbjct: 682 HDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI-AIQQISAGTSHSLAWTA 735


>gi|321474724|gb|EFX85688.1| hypothetical protein DAPPUDRAFT_98215 [Daphnia pulex]
          Length = 1052

 Score =  101 bits (251), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 69/225 (30%), Positives = 110/225 (48%), Gaps = 4/225 (1%)

Query: 115 QITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+  G  HTL  +    VF+ GS+  G LG   E +   +   +   +   VVQ++   +
Sbjct: 88  QVACGAQHTLAQNEWGEVFAWGSNSNGQLGLNVEESMMPTPKMVKSLATKQVVQIACGRS 147

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  +   G+++  G NS    G   +  P  +P LV+ L+G+P   ++ G +F+  +T 
Sbjct: 148 HSMALTNVGEIYCWGSNSHGQLGLGSSGTPETKPCLVKLLQGIPISHISCGADFSFAVTP 207

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V+  G N+ GQLG GDT DRP P  +  L     V  I  G  +  A+T +G V++F
Sbjct: 208 SGAVYGWGKNSFGQLGLGDTTDRPQPTQLKSL-RFQRVTYIRCGMDHTAALTRDGGVFTF 266

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           G+G    LGH    +E+ PR +      G  V ++  G  H +A 
Sbjct: 267 GAGMYGQLGHCTSANEMLPRKV--LELMGTTVTQICCGRCHTLAF 309



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 70/235 (29%), Positives = 112/235 (47%), Gaps = 12/235 (5%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVS 169
           +Q+  G  HT+L+  +  +FS G +  G LGH      C S TR   ++   A ++ QV+
Sbjct: 37  VQVGCGENHTILVMKDGKLFSFGLNDYGQLGH------CRSRTRAEPVDGLEAHNITQVA 90

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
               H     + G+VF  G NS+   G       +  P++V++L      Q+  G + + 
Sbjct: 91  CGAQHTLAQNEWGEVFAWGSNSNGQLGLNVEESMMPTPKMVKSLATKQVVQIACGRSHSM 150

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
            LT  G ++  GSN+HGQLG G +    T   +  L +   +  I+ G  +  AVT +G 
Sbjct: 151 ALTNVGEIYCWGSNSHGQLGLGSSGTPETKPCLVKLLQGIPISHISCGADFSFAVTPSGA 210

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           VY +G  S   LG G+  D  QP  +++ R + +  +R   G +H  AL   G V
Sbjct: 211 VYGWGKNSFGQLGLGDTTDRPQPTQLKSLRFQRVTYIR--CGMDHTAALTRDGGV 263



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 63/188 (33%), Positives = 90/188 (47%), Gaps = 8/188 (4%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
           F     +VQV   ENH   V++ G++F+ G N     GH    R   R   V+ L+    
Sbjct: 30  FTLVDDIVQVGCGENHTILVMKDGKLFSFGLNDYGQLGH---CRSRTRAEPVDGLEAHNI 86

Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGDTLDRPTPKSIAPLEEVGSVVQIAAG 277
            QV  G   T      G V   GSN++GQLG + +    PTPK +  L     VVQIA G
Sbjct: 87  TQVACGAQHTLAQNEWGEVFAWGSNSNGQLGLNVEESMMPTPKMVKSL-ATKQVVQIACG 145

Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
            S+ +A+T  G +Y +GS S+  LG G     E +P  ++    +GI +  +S G +   
Sbjct: 146 RSHSMALTNVGEIYCWGSNSHGQLGLGSSGTPETKPCLVKLL--QGIPISHISCGADFSF 203

Query: 337 ALDSSGYV 344
           A+  SG V
Sbjct: 204 AVTPSGAV 211


>gi|326926479|ref|XP_003209427.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
           [Meleagris gallopavo]
          Length = 4334

 Score =  101 bits (251), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 73/235 (31%), Positives = 124/235 (52%), Gaps = 13/235 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           V+SFG G N  LGHG+ +   +P+ I+    +G+ + +V AG +  +AL S+G V
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEAL--QGMFIRKVCAGSQSSLALTSTGQV 635



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 73/237 (30%), Positives = 124/237 (52%), Gaps = 14/237 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 3504 QVVCGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 3562

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 3563 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 3621

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ +AV+ +G
Sbjct: 3622 VTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTVAVSMDG 3678

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+V
Sbjct: 3679 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDIL--CGIGIKKVACGTQFSVALTKDGHV 3733



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/225 (30%), Positives = 111/225 (49%), Gaps = 7/225 (3%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 3566 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTA 3624

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHT 239
             G++FT G+      G  +T+     P  V AL+G    QV  GLN T  +++ G  V  
Sbjct: 3625 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTVAVSMDGSMVWA 3683

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ +  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 3684 FGDGDYGKLGLGNSTAKSSPQKVDILCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 3742

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             L  G   +  +P+ +      G+ +  ++ G EH +AL S+G V
Sbjct: 3743 GLPEGRARNHNRPQQVPVL--SGVFIEDIAVGAEHTLALSSTGDV 3785



 Score = 84.7 bits (208), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 79/222 (35%), Positives = 113/222 (50%), Gaps = 15/222 (6%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 298 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             CLG G  +   L+P+ I+        +V +S GD H +AL
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLAL 680



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 110/234 (47%), Gaps = 38/234 (16%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS----AAHVVQVSASENHA 175
           R+   +  +  +++ G    G LGHG   ++       N P+     ++V +VS   +H 
Sbjct: 521 RHSAAVTEDGELYTWGEGDFGRLGHGDSNSR-------NIPTLVKDISNVGEVSCGSSHT 573

Query: 176 AFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             + + G+    F  GDN     GH DTNR +++P+++EAL+G+  ++V AG   +  LT
Sbjct: 574 IALSKDGRTVWSFGGGDNGKL--GHGDTNR-VYKPKVIEALQGMFIRKVCAGSQSSLALT 630

Query: 233 IRGHVHT--------CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             G V+         CGS+    L          PK I  L     +V I+ G S+ LA+
Sbjct: 631 STGQVYAWGCGACLGCGSSEATAL---------RPKLIEELAAT-RIVDISIGDSHCLAL 680

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           + +  VY++G+ S    G G     + +P+ +      G+ + ++SAG  H +A
Sbjct: 681 SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGL--DGVSIQQISAGTSHSLA 732



 Score = 64.7 bits (156), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 103/228 (45%), Gaps = 11/228 (4%)

Query: 114  MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ +++ +  +F+ G+   G LG G  + + +   R+       + QV+   
Sbjct: 3610 VQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 3668

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G +   F  GD      G+         P+ V+ L G+  K+V  G  F+ 
Sbjct: 3669 NHTVAVSMDGSMVWAFGDGDYGKLGLGNSTAKS---SPQKVDILCGIGIKKVACGTQFSV 3725

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             LT  GHV+T G +    L  G   +   P+ +  L  V  +  IA G  + LA++  G 
Sbjct: 3726 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPVLSGV-FIEDIAVGAEHTLALSSTGD 3784

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            VY++GS S   LG G  +   +P  I   + K I   ++SAG  H  A
Sbjct: 3785 VYAWGSNSEGQLGLGHTNHVREPTLITVLQGKNIR--QISAGRCHSAA 3830



 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 84/189 (44%), Gaps = 14/189 (7%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSG 342
           H +AL   G
Sbjct: 572 HTIALSKDG 580



 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/175 (28%), Positives = 84/175 (48%), Gaps = 7/175 (4%)

Query: 115 QITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++ G  HT+ +S    +V+S G    G LGHG +T +      I       + +V A  
Sbjct: 565 EVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEALQGMFIRKVCAGS 623

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             +  +  +GQV+  G  +   CG  +      RP+L+E L       ++ G +    L+
Sbjct: 624 QSSLALTSTGQVYAWGCGACLGCGSSEAT--ALRPKLIEELAATRIVDISIGDSHCLALS 681

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
               V+  G+N+ GQ G G++    T PK ++ L+ V S+ QI+AG S+ LA T 
Sbjct: 682 HDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGV-SIQQISAGTSHSLAWTA 735



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 44/163 (26%), Positives = 76/163 (46%), Gaps = 10/163 (6%)

Query: 184  VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            ++  G +       R+   P+  P   +A      +QV  G N T  +   G V  CG  
Sbjct: 3474 LWGAGRHGQLAEAGRNVMVPVAAPSFSQA------QQVVCGQNCTFVIQANGTVLACGEG 3527

Query: 244  THGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 301
            ++G+LG G++ D      I+ L+   V  +V       + +A+T +G V+S+G G    L
Sbjct: 3528 SYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKL 3587

Query: 302  GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            GHG    + +PR I+    +G  VV++S G +H   + + G +
Sbjct: 3588 GHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSAVVTADGKL 3628



 Score = 48.1 bits (113), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 80/180 (44%), Gaps = 11/180 (6%)

Query: 115  QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HT+ +S   S V++ G    G LG G  T +  S  +++      + +V+   
Sbjct: 3663 QVACGLNHTVAVSMDGSMVWAFGDGDYGKLGLGNSTAKS-SPQKVDILCGIGIKKVACGT 3721

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + V  L GV  + +  G   T 
Sbjct: 3722 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQVPVLSGVFIEDIAVGAEHTL 3777

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L+  G V+  GSN+ GQLG G T     P  I  L+   ++ QI+AG  +  A T   V
Sbjct: 3778 ALSSTGDVYAWGSNSEGQLGLGHTNHVREPTLITVLQG-KNIRQISAGRCHSAAWTAPPV 3836


>gi|118095631|ref|XP_413753.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Gallus
           gallus]
          Length = 4860

 Score =  101 bits (251), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 73/235 (31%), Positives = 124/235 (52%), Gaps = 13/235 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           V+SFG G N  LGHG+ +   +P+ I+    +G+ + +V AG +  +AL S+G V
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEAL--QGMFIRKVCAGSQSSLALTSTGQV 635



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 73/237 (30%), Positives = 124/237 (52%), Gaps = 14/237 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4030 QVVCGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4088

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4089 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4147

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ +AV+ +G
Sbjct: 4148 VTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTVAVSTDG 4204

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+V
Sbjct: 4205 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDIL--CGIGIKKVACGTQFSVALTKDGHV 4259



 Score = 85.5 bits (210), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 68/225 (30%), Positives = 110/225 (48%), Gaps = 7/225 (3%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 4092 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTA 4150

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHT 239
             G++FT G+      G  +T+     P  V AL+G    QV  GLN T  ++  G  V  
Sbjct: 4151 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTVAVSTDGSMVWA 4209

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ +  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 4210 FGDGDYGKLGLGNSTAKSSPQKVDILCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 4268

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             L  G   +  +P+ +      G+ +  ++ G EH +AL S+G V
Sbjct: 4269 GLPEGRARNHNRPQQVPVL--SGVFIEDIAVGAEHTLALSSTGDV 4311



 Score = 84.7 bits (208), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 79/222 (35%), Positives = 113/222 (50%), Gaps = 15/222 (6%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 298 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             CLG G  +   L+P+ I+        +V +S GD H +AL
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLAL 680



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 110/234 (47%), Gaps = 38/234 (16%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS----AAHVVQVSASENHA 175
           R+   +  +  +++ G    G LGHG   ++       N P+     ++V +VS   +H 
Sbjct: 521 RHSAAVTEDGELYTWGEGDFGRLGHGDSNSR-------NIPTLVKDISNVGEVSCGSSHT 573

Query: 176 AFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             + + G+    F  GDN     GH DTNR +++P+++EAL+G+  ++V AG   +  LT
Sbjct: 574 IALSKDGRTVWSFGGGDNGKL--GHGDTNR-VYKPKVIEALQGMFIRKVCAGSQSSLALT 630

Query: 233 IRGHVHT--------CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             G V+         CGS+    L          PK I  L     +V I+ G S+ LA+
Sbjct: 631 STGQVYAWGCGACLGCGSSEATAL---------RPKLIEELAAT-RIVDISIGDSHCLAL 680

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           + +  VY++G+ S    G G     + +P+ +      G+ + ++SAG  H +A
Sbjct: 681 SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGL--DGVSIQQISAGTSHSLA 732



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 103/228 (45%), Gaps = 11/228 (4%)

Query: 114  MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ +++ +  +F+ G+   G LG G  + + +   R+       + QV+   
Sbjct: 4136 VQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 4194

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G +   F  GD      G+         P+ V+ L G+  K+V  G  F+ 
Sbjct: 4195 NHTVAVSTDGSMVWAFGDGDYGKLGLGNSTAKS---SPQKVDILCGIGIKKVACGTQFSV 4251

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             LT  GHV+T G +    L  G   +   P+ +  L  V  +  IA G  + LA++  G 
Sbjct: 4252 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPVLSGV-FIEDIAVGAEHTLALSSTGD 4310

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            VY++GS S   LG G  +   +P  I   + K I   ++SAG  H  A
Sbjct: 4311 VYAWGSNSEGQLGLGHTNHVREPTLITVLQGKNIR--QISAGRCHSAA 4356



 Score = 61.2 bits (147), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 84/189 (44%), Gaps = 14/189 (7%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSG 342
           H +AL   G
Sbjct: 572 HTIALSKDG 580



 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/175 (28%), Positives = 84/175 (48%), Gaps = 7/175 (4%)

Query: 115 QITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++ G  HT+ +S    +V+S G    G LGHG +T +      I       + +V A  
Sbjct: 565 EVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEALQGMFIRKVCAGS 623

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             +  +  +GQV+  G  +   CG  +      RP+L+E L       ++ G +    L+
Sbjct: 624 QSSLALTSTGQVYAWGCGACLGCGSSEAT--ALRPKLIEELAATRIVDISIGDSHCLALS 681

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
               V+  G+N+ GQ G G++    T PK ++ L+ V S+ QI+AG S+ LA T 
Sbjct: 682 HDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGV-SIQQISAGTSHSLAWTA 735



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 44/163 (26%), Positives = 76/163 (46%), Gaps = 10/163 (6%)

Query: 184  VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            ++  G +       R+   P+  P   +A      +QV  G N T  +   G V  CG  
Sbjct: 4000 LWGAGRHGQLAEAGRNVMVPVAAPSFSQA------QQVVCGQNCTFVIQANGTVLACGEG 4053

Query: 244  THGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 301
            ++G+LG G++ D      I+ L+   V  +V       + +A+T +G V+S+G G    L
Sbjct: 4054 SYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKL 4113

Query: 302  GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            GHG    + +PR I+    +G  VV++S G +H   + + G +
Sbjct: 4114 GHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSAVVTADGKL 4154



 Score = 48.1 bits (113), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 80/180 (44%), Gaps = 11/180 (6%)

Query: 115  QITTGRYHTLLISN--SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HT+ +S   S V++ G    G LG G  T +  S  +++      + +V+   
Sbjct: 4189 QVACGLNHTVAVSTDGSMVWAFGDGDYGKLGLGNSTAKS-SPQKVDILCGIGIKKVACGT 4247

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + V  L GV  + +  G   T 
Sbjct: 4248 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQVPVLSGVFIEDIAVGAEHTL 4303

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L+  G V+  GSN+ GQLG G T     P  I  L+   ++ QI+AG  +  A T   V
Sbjct: 4304 ALSSTGDVYAWGSNSEGQLGLGHTNHVREPTLITVLQG-KNIRQISAGRCHSAAWTAPPV 4362


>gi|403298208|ref|XP_003939923.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Saimiri
           boliviensis boliviensis]
          Length = 4860

 Score =  100 bits (250), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 73/235 (31%), Positives = 124/235 (52%), Gaps = 13/235 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           V+SFG G N  LGHG+ +   +P+ I+    +G+ + +V AG +  +AL S+G V
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEAL--QGMFIRKVCAGSQSSLALTSTGQV 635



 Score = 95.5 bits (236), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 75/237 (31%), Positives = 124/237 (52%), Gaps = 14/237 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4030 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4088

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4089 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4147

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4148 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4204

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             VV++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+V
Sbjct: 4205 SVVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHV 4259



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 80/222 (36%), Positives = 113/222 (50%), Gaps = 15/222 (6%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 298 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             CLG G  +   L+P+ I+        +V VS GD H +AL
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLAL 680



 Score = 84.7 bits (208), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 70/225 (31%), Positives = 110/225 (48%), Gaps = 7/225 (3%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 4092 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTS 4150

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV-HT 239
             G++FT G+      G  +T+     P  V AL+G    QV  GLN T  ++  G V   
Sbjct: 4151 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSVVWA 4209

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ +  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 4210 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 4268

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             L  G   +  +P+ I      G+ +  V+ G EH +AL S+G V
Sbjct: 4269 GLPEGRARNHNRPQQIPVL--AGVIIEDVAVGAEHTLALASNGDV 4311



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 110/234 (47%), Gaps = 38/234 (16%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS----AAHVVQVSASENHA 175
           R+   +  +  +++ G    G LGHG   ++       N P+     ++V +VS   +H 
Sbjct: 521 RHSAAVTEDGELYTWGEGDFGRLGHGDSNSR-------NIPTLVKDISNVGEVSCGSSHT 573

Query: 176 AFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             + + G+    F  GDN     GH DTNR +++P+++EAL+G+  ++V AG   +  LT
Sbjct: 574 IALSKDGRTVWSFGGGDNGKL--GHGDTNR-VYKPKVIEALQGMFIRKVCAGSQSSLALT 630

Query: 233 IRGHVHT--------CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             G V+         CGS+    L          PK I  L     +V ++ G S+ LA+
Sbjct: 631 STGQVYAWGCGACLGCGSSEATAL---------RPKLIEELAAT-RIVDVSIGDSHCLAL 680

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           + +  VY++G+ S    G G     + +P+ +      GI + ++SAG  H +A
Sbjct: 681 SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGL--DGIAIQQISAGTSHSLA 732



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 106/229 (46%), Gaps = 13/229 (5%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ ++ S+  +F+ G+   G LG G  + + +   R+       + QV+   
Sbjct: 4136 VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 4194

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G V   F  GD      G+         P+ V+ L G+  K+V  G  F+ 
Sbjct: 4195 NHTLAVSADGSVVWAFGDGDYGKLGLGNSTAKS---SPQKVDVLCGIGIKKVACGTQFSV 4251

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNG 288
             LT  GHV+T G +    L  G   +   P+ I  L   G +++ +A G  + LA+  NG
Sbjct: 4252 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVL--AGVIIEDVAVGAEHTLALASNG 4309

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             VY++GS S   LG G  +   +P  +     +G +V ++SAG  H  A
Sbjct: 4310 DVYAWGSNSEGQLGLGHTNHVREPTLVTGL--QGKNVRQISAGRCHSAA 4356



 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 84/189 (44%), Gaps = 14/189 (7%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSG 342
           H +AL   G
Sbjct: 572 HTIALSKDG 580



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 84/175 (48%), Gaps = 7/175 (4%)

Query: 115 QITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++ G  HT+ +S    +V+S G    G LGHG +T +      I       + +V A  
Sbjct: 565 EVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEALQGMFIRKVCAGS 623

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             +  +  +GQV+  G  +   CG  +      RP+L+E L       V+ G +    L+
Sbjct: 624 QSSLALTSTGQVYAWGCGACLGCGSSEAT--ALRPKLIEELAATRIVDVSIGDSHCLALS 681

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
               V+  G+N+ GQ G G++    T PK ++ L+ + ++ QI+AG S+ LA T 
Sbjct: 682 HDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI-AIQQISAGTSHSLAWTA 735



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 65/128 (50%), Gaps = 4/128 (3%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 4029 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4088

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H  
Sbjct: 4089 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 4146

Query: 337  ALDSSGYV 344
             + S G +
Sbjct: 4147 VVTSDGKL 4154



 Score = 48.5 bits (114), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 79/180 (43%), Gaps = 11/180 (6%)

Query: 115  QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HTL +S   S V++ G    G LG G  T +  S  +++      + +V+   
Sbjct: 4189 QVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGNSTAKS-SPQKVDVLCGIGIKKVACGT 4247

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + +  L GV  + V  G   T 
Sbjct: 4248 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQIPVLAGVIIEDVAVGAEHTL 4303

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L   G V+  GSN+ GQLG G T     P  +  L+   +V QI+AG  +  A T   V
Sbjct: 4304 ALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQG-KNVRQISAGRCHSAAWTAPPV 4362


>gi|350578534|ref|XP_001927286.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Sus scrofa]
          Length = 4859

 Score =  100 bits (250), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 73/235 (31%), Positives = 124/235 (52%), Gaps = 13/235 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           V+SFG G N  LGHG+ +   +P+ I+    +G+ + +V AG +  +AL S+G V
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEAL--QGMFIRKVCAGSQSSLALTSTGQV 635



 Score = 94.4 bits (233), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 124/237 (52%), Gaps = 14/237 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4029 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4087

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4088 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4146

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4147 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4203

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+V
Sbjct: 4204 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHV 4258



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 70/225 (31%), Positives = 110/225 (48%), Gaps = 7/225 (3%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 4091 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTS 4149

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHT 239
             G++FT G+      G  +T+     P  V AL+G    QV  GLN T  ++  G  V  
Sbjct: 4150 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 4208

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ +  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 4209 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 4267

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             L  G   +  +P+ I      G+ +  V+ G EH +AL S+G V
Sbjct: 4268 GLPEGRARNHNRPQQIPVL--AGVVIEDVAVGAEHTLALASTGDV 4310



 Score = 84.3 bits (207), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 79/222 (35%), Positives = 113/222 (50%), Gaps = 15/222 (6%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 298 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             CLG G  +   L+P+ I+        +V +S GD H +AL
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLAL 680



 Score = 67.8 bits (164), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 110/234 (47%), Gaps = 38/234 (16%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS----AAHVVQVSASENHA 175
           R+   +  +  +++ G    G LGHG   ++       N P+     ++V +VS   +H 
Sbjct: 521 RHSAAVTEDGELYTWGEGDFGRLGHGDSNSR-------NIPTLVKDISNVGEVSCGSSHT 573

Query: 176 AFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             + + G+    F  GDN     GH DTNR +++P+++EAL+G+  ++V AG   +  LT
Sbjct: 574 IALSKDGRTVWSFGGGDNGKL--GHGDTNR-VYKPKVIEALQGMFIRKVCAGSQSSLALT 630

Query: 233 IRGHVHT--------CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             G V+         CGS+    L          PK I  L     +V I+ G S+ LA+
Sbjct: 631 STGQVYAWGCGACLGCGSSEATAL---------RPKLIEELAAT-RIVDISIGDSHCLAL 680

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           + +  VY++G+ S    G G     + +P+ +      GI + ++SAG  H +A
Sbjct: 681 SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGL--DGIAIQQISAGTSHSLA 732



 Score = 64.3 bits (155), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 105/229 (45%), Gaps = 13/229 (5%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ ++ S+  +F+ G+   G LG G  + + +   R+       + QV+   
Sbjct: 4135 VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 4193

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G +   F  GD      G+         P+ V+ L G+  K+V  G  F+ 
Sbjct: 4194 NHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS---SPQKVDVLCGIGIKKVACGTQFSV 4250

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNG 288
             LT  GHV+T G +    L  G   +   P+ I  L   G V++ +A G  + LA+   G
Sbjct: 4251 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVL--AGVVIEDVAVGAEHTLALASTG 4308

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             VY++GS S   LG G  +   +P  +     +G +V ++SAG  H  A
Sbjct: 4309 DVYAWGSNSEGQLGLGHTNHVREPTLVTVL--QGKNVRQISAGRCHSAA 4355



 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 84/189 (44%), Gaps = 14/189 (7%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSG 342
           H +AL   G
Sbjct: 572 HTIALSKDG 580



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 84/175 (48%), Gaps = 7/175 (4%)

Query: 115 QITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++ G  HT+ +S    +V+S G    G LGHG +T +      I       + +V A  
Sbjct: 565 EVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEALQGMFIRKVCAGS 623

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             +  +  +GQV+  G  +   CG  +      RP+L+E L       ++ G +    L+
Sbjct: 624 QSSLALTSTGQVYAWGCGACLGCGSSEAT--ALRPKLIEELAATRIVDISIGDSHCLALS 681

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
               V+  G+N+ GQ G G++    T PK ++ L+ + ++ QI+AG S+ LA T 
Sbjct: 682 HDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI-AIQQISAGTSHSLAWTA 735



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 65/128 (50%), Gaps = 4/128 (3%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 4028 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4087

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H  
Sbjct: 4088 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 4145

Query: 337  ALDSSGYV 344
             + S G +
Sbjct: 4146 VVTSDGKL 4153



 Score = 48.5 bits (114), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 79/180 (43%), Gaps = 11/180 (6%)

Query: 115  QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HTL +S   S V++ G    G LG G  T +  S  +++      + +V+   
Sbjct: 4188 QVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKVDVLCGIGIKKVACGT 4246

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + +  L GV  + V  G   T 
Sbjct: 4247 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQIPVLAGVVIEDVAVGAEHTL 4302

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L   G V+  GSN+ GQLG G T     P  +  L+   +V QI+AG  +  A T   V
Sbjct: 4303 ALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQG-KNVRQISAGRCHSAAWTAPPV 4361


>gi|291402886|ref|XP_002718216.1| PREDICTED: hect domain and RCC1-like domain 1 [Oryctolagus
           cuniculus]
          Length = 4860

 Score =  100 bits (250), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 73/235 (31%), Positives = 124/235 (52%), Gaps = 13/235 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           V+SFG G N  LGHG+ +   +P+ I+    +G+ + +V AG +  +AL S+G V
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEAL--QGMFIRKVCAGSQSSLALTSTGQV 635



 Score = 94.4 bits (233), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 124/237 (52%), Gaps = 14/237 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4030 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4088

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4089 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4147

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4148 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4204

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+V
Sbjct: 4205 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHV 4259



 Score = 84.3 bits (207), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 79/222 (35%), Positives = 113/222 (50%), Gaps = 15/222 (6%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 298 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             CLG G  +   L+P+ I+        +V +S GD H +AL
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLAL 680



 Score = 84.3 bits (207), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 69/225 (30%), Positives = 110/225 (48%), Gaps = 7/225 (3%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 4092 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTS 4150

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHT 239
             G++FT G+      G  +T+     P  V AL+G    QV  GLN T  ++  G  V  
Sbjct: 4151 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 4209

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ +  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 4210 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 4268

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             L  G   +  +P+ +      G+ +  V+ G EH +AL S+G V
Sbjct: 4269 GLPEGRARNHNRPQQVPVL--AGVVIEDVAVGAEHTLALASTGDV 4311



 Score = 67.8 bits (164), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 110/234 (47%), Gaps = 38/234 (16%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS----AAHVVQVSASENHA 175
           R+   +  +  +++ G    G LGHG   ++       N P+     ++V +VS   +H 
Sbjct: 521 RHSAAVTEDGELYTWGEGDFGRLGHGDSNSR-------NIPTLVKDISNVGEVSCGSSHT 573

Query: 176 AFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             + + G+    F  GDN     GH DTNR +++P+++EAL+G+  ++V AG   +  LT
Sbjct: 574 IALSKDGRTVWSFGGGDNGKL--GHGDTNR-VYKPKVIEALQGMFIRKVCAGSQSSLALT 630

Query: 233 IRGHVHT--------CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             G V+         CGS+    L          PK I  L     +V I+ G S+ LA+
Sbjct: 631 STGQVYAWGCGACLGCGSSEATAL---------RPKLIEELAAT-RIVDISIGDSHCLAL 680

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           + +  VY++G+ S    G G     + +P+ +      GI + ++SAG  H +A
Sbjct: 681 SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGL--DGIAIQQISAGTSHSLA 732



 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 104/229 (45%), Gaps = 13/229 (5%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ ++ S+  +F+ G+   G LG G  + + +   R+       + QV+   
Sbjct: 4136 VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 4194

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G +   F  GD      G+         P+ V+ L G+  K+V  G  F+ 
Sbjct: 4195 NHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS---SPQKVDVLCGIGIKKVACGTQFSV 4251

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNG 288
             LT  GHV+T G +    L  G   +   P+ +  L   G V++ +A G  + LA+   G
Sbjct: 4252 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPVL--AGVVIEDVAVGAEHTLALASTG 4309

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             VY++GS S   LG G  +   +P  +   + K I   ++SAG  H  A
Sbjct: 4310 DVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIR--QISAGRCHSAA 4356



 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 84/189 (44%), Gaps = 14/189 (7%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSG 342
           H +AL   G
Sbjct: 572 HTIALSKDG 580



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 84/175 (48%), Gaps = 7/175 (4%)

Query: 115 QITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++ G  HT+ +S    +V+S G    G LGHG +T +      I       + +V A  
Sbjct: 565 EVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEALQGMFIRKVCAGS 623

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             +  +  +GQV+  G  +   CG  +      RP+L+E L       ++ G +    L+
Sbjct: 624 QSSLALTSTGQVYAWGCGACLGCGSSEAT--ALRPKLIEELAATRIVDISIGDSHCLALS 681

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
               V+  G+N+ GQ G G++    T PK ++ L+ + ++ QI+AG S+ LA T 
Sbjct: 682 HDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI-AIQQISAGTSHSLAWTA 735



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 65/128 (50%), Gaps = 4/128 (3%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 4029 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4088

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H  
Sbjct: 4089 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 4146

Query: 337  ALDSSGYV 344
             + S G +
Sbjct: 4147 VVTSDGKL 4154



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 79/180 (43%), Gaps = 11/180 (6%)

Query: 115  QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HTL +S   S V++ G    G LG G  T +  S  +++      + +V+   
Sbjct: 4189 QVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKVDVLCGIGIKKVACGT 4247

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + V  L GV  + V  G   T 
Sbjct: 4248 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQVPVLAGVVIEDVAVGAEHTL 4303

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L   G V+  GSN+ GQLG G T     P  +  L+   ++ QI+AG  +  A T   V
Sbjct: 4304 ALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQG-KNIRQISAGRCHSAAWTAPPV 4362


>gi|426379401|ref|XP_004056386.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Gorilla
           gorilla gorilla]
          Length = 4502

 Score =  100 bits (250), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 73/235 (31%), Positives = 124/235 (52%), Gaps = 13/235 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           V+SFG G N  LGHG+ +   +P+ I+    +G+ + +V AG +  +AL S+G V
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEAL--QGMFIRKVCAGSQSSLALTSTGQV 635



 Score = 95.1 bits (235), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 75/237 (31%), Positives = 124/237 (52%), Gaps = 14/237 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 3672 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 3730

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 3731 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 3789

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 3790 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 3846

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             +V++FG G    LG G    +  P+ I      GI + +V+ G +  VAL   G+V
Sbjct: 3847 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL--CGIGIKKVACGTQFSVALTKDGHV 3901



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 71/225 (31%), Positives = 110/225 (48%), Gaps = 7/225 (3%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 3734 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTS 3792

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHT 239
             G++FT G+      G  +T+     P  V AL+G    QV  GLN T  ++  G  V  
Sbjct: 3793 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 3851

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ I  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 3852 FGDGDYGKLGLGNSTAKSSPQKIDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 3910

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             L  G   +  +P+ I      G+ +  V+ G EH +AL S+G V
Sbjct: 3911 GLPEGRARNHNRPQQIPVL--AGVIIEDVAVGAEHTLALASNGDV 3953



 Score = 84.7 bits (208), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 80/222 (36%), Positives = 113/222 (50%), Gaps = 15/222 (6%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 298 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             CLG G  +   L+P+ I+        +V VS GD H +AL
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLAL 680



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 110/234 (47%), Gaps = 38/234 (16%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS----AAHVVQVSASENHA 175
           R+   +  +  +++ G    G LGHG   ++       N P+     ++V +VS   +H 
Sbjct: 521 RHSAAVTEDGELYTWGEGDFGRLGHGDSNSR-------NIPTLVKDISNVGEVSCGSSHT 573

Query: 176 AFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             + + G+    F  GDN     GH DTNR +++P+++EAL+G+  ++V AG   +  LT
Sbjct: 574 IALSKDGRTVWSFGGGDNGKL--GHGDTNR-VYKPKVIEALQGMFIRKVCAGSQSSLALT 630

Query: 233 IRGHVHT--------CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             G V+         CGS+    L          PK I  L     +V ++ G S+ LA+
Sbjct: 631 STGQVYAWGCGACLGCGSSEATAL---------RPKLIEELAAT-RIVDVSIGDSHCLAL 680

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           + +  VY++G+ S    G G     + +P+ +      GI + ++SAG  H +A
Sbjct: 681 SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGL--DGIAIQQISAGTSHSLA 732



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 13/229 (5%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ ++ S+  +F+ G+   G LG G  + + +   R+       + QV+   
Sbjct: 3778 VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 3836

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G +   F  GD      G+         P+ ++ L G+  K+V  G  F+ 
Sbjct: 3837 NHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS---SPQKIDVLCGIGIKKVACGTQFSV 3893

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNG 288
             LT  GHV+T G +    L  G   +   P+ I  L   G +++ +A G  + LA+  NG
Sbjct: 3894 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVL--AGVIIEDVAVGAEHTLALASNG 3951

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             VY++GS S   LG G  +   +P  +     +G +V ++SAG  H  A
Sbjct: 3952 DVYAWGSNSEGQLGLGHTNHVREPTVVTGL--QGKNVRQISAGRCHSAA 3998



 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 84/189 (44%), Gaps = 14/189 (7%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSG 342
           H +AL   G
Sbjct: 572 HTIALSKDG 580



 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 84/175 (48%), Gaps = 7/175 (4%)

Query: 115 QITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++ G  HT+ +S    +V+S G    G LGHG +T +      I       + +V A  
Sbjct: 565 EVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEALQGMFIRKVCAGS 623

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             +  +  +GQV+  G  +   CG  +      RP+L+E L       V+ G +    L+
Sbjct: 624 QSSLALTSTGQVYAWGCGACLGCGSSEAT--ALRPKLIEELAATRIVDVSIGDSHCLALS 681

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
               V+  G+N+ GQ G G++    T PK ++ L+ + ++ QI+AG S+ LA T 
Sbjct: 682 HDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI-AIQQISAGTSHSLAWTA 735



 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 65/128 (50%), Gaps = 4/128 (3%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 3671 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 3730

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H  
Sbjct: 3731 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 3788

Query: 337  ALDSSGYV 344
             + S G +
Sbjct: 3789 VVTSDGKL 3796



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 53/180 (29%), Positives = 79/180 (43%), Gaps = 11/180 (6%)

Query: 115  QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HTL +S   S V++ G    G LG G  T +  S  +I+      + +V+   
Sbjct: 3831 QVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKIDVLCGIGIKKVACGT 3889

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + +  L GV  + V  G   T 
Sbjct: 3890 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQIPVLAGVIIEDVAVGAEHTL 3945

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L   G V+  GSN+ GQLG G T     P  +  L+   +V QI+AG  +  A T   V
Sbjct: 3946 ALASNGDVYAWGSNSEGQLGLGHTNHVREPTVVTGLQG-KNVRQISAGRCHSAAWTAPPV 4004


>gi|296213415|ref|XP_002753260.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 1
           [Callithrix jacchus]
 gi|390468428|ref|XP_003733941.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 2
           [Callithrix jacchus]
          Length = 4860

 Score =  100 bits (250), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 73/235 (31%), Positives = 124/235 (52%), Gaps = 13/235 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           V+SFG G N  LGHG+ +   +P+ I+    +G+ + +V AG +  +AL S+G V
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEAL--QGMFIRKVCAGSQSSLALTSTGQV 635



 Score = 94.4 bits (233), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 124/237 (52%), Gaps = 14/237 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4030 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4088

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4089 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4147

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4148 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4204

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+V
Sbjct: 4205 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHV 4259



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 80/222 (36%), Positives = 113/222 (50%), Gaps = 15/222 (6%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 298 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             CLG G  +   L+P+ I+        +V VS GD H +AL
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLAL 680



 Score = 84.0 bits (206), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 69/225 (30%), Positives = 110/225 (48%), Gaps = 7/225 (3%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 4092 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTS 4150

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHT 239
             G++FT G+      G  +T+     P  V AL+G    QV  GLN T  ++  G  V  
Sbjct: 4151 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 4209

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ +  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 4210 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 4268

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             L  G   +  +P+ +      G+ +  V+ G EH +AL S+G V
Sbjct: 4269 GLPEGRARNHNRPQQVPVL--AGVVIEDVAVGAEHTLALASNGDV 4311



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 110/234 (47%), Gaps = 38/234 (16%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS----AAHVVQVSASENHA 175
           R+   +  +  +++ G    G LGHG   ++       N P+     ++V +VS   +H 
Sbjct: 521 RHSAAVTEDGELYTWGEGDFGRLGHGDSNSR-------NIPTLVKDISNVGEVSCGSSHT 573

Query: 176 AFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             + + G+    F  GDN     GH DTNR +++P+++EAL+G+  ++V AG   +  LT
Sbjct: 574 IALSKDGRTVWSFGGGDNGKL--GHGDTNR-VYKPKVIEALQGMFIRKVCAGSQSSLALT 630

Query: 233 IRGHVHT--------CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             G V+         CGS+    L          PK I  L     +V ++ G S+ LA+
Sbjct: 631 STGQVYAWGCGACLGCGSSEATAL---------RPKLIEELAAT-RIVDVSIGDSHCLAL 680

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           + +  VY++G+ S    G G     + +P+ +      GI + ++SAG  H +A
Sbjct: 681 SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGL--DGIAIQQISAGTSHSLA 732



 Score = 65.1 bits (157), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 106/229 (46%), Gaps = 13/229 (5%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ ++ S+  +F+ G+   G LG G  + + +   R+       + QV+   
Sbjct: 4136 VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 4194

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G +   F  GD      G+         P+ V+ L G+  K+V  G  F+ 
Sbjct: 4195 NHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS---SPQKVDVLCGIGIKKVACGTQFSV 4251

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNG 288
             LT  GHV+T G +    L  G   +   P+ +  L   G V++ +A G  + LA+  NG
Sbjct: 4252 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPVL--AGVVIEDVAVGAEHTLALASNG 4309

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             VY++GS S   LG G  +   +P  +     +G +V ++SAG  H  A
Sbjct: 4310 DVYAWGSNSEGQLGLGHTNHVREPTLVTGL--QGKNVRQISAGRCHSAA 4356



 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 84/189 (44%), Gaps = 14/189 (7%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSG 342
           H +AL   G
Sbjct: 572 HTIALSKDG 580



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 84/175 (48%), Gaps = 7/175 (4%)

Query: 115 QITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++ G  HT+ +S    +V+S G    G LGHG +T +      I       + +V A  
Sbjct: 565 EVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEALQGMFIRKVCAGS 623

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             +  +  +GQV+  G  +   CG  +      RP+L+E L       V+ G +    L+
Sbjct: 624 QSSLALTSTGQVYAWGCGACLGCGSSEAT--ALRPKLIEELAATRIVDVSIGDSHCLALS 681

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
               V+  G+N+ GQ G G++    T PK ++ L+ + ++ QI+AG S+ LA T 
Sbjct: 682 HDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI-AIQQISAGTSHSLAWTA 735



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 65/128 (50%), Gaps = 4/128 (3%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 4029 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4088

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H  
Sbjct: 4089 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 4146

Query: 337  ALDSSGYV 344
             + S G +
Sbjct: 4147 VVTSDGKL 4154



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 53/180 (29%), Positives = 79/180 (43%), Gaps = 11/180 (6%)

Query: 115  QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HTL +S   S V++ G    G LG G  T +  S  +++      + +V+   
Sbjct: 4189 QVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKVDVLCGIGIKKVACGT 4247

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + V  L GV  + V  G   T 
Sbjct: 4248 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQVPVLAGVVIEDVAVGAEHTL 4303

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L   G V+  GSN+ GQLG G T     P  +  L+   +V QI+AG  +  A T   V
Sbjct: 4304 ALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQG-KNVRQISAGRCHSAAWTAPPV 4362


>gi|426233168|ref|XP_004010589.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Ovis aries]
          Length = 4856

 Score =  100 bits (250), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 73/235 (31%), Positives = 124/235 (52%), Gaps = 13/235 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           V+SFG G N  LGHG+ +   +P+ I+    +G+ + +V AG +  +AL S+G V
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEAL--QGMFIRKVCAGSQSSLALTSTGQV 635



 Score = 94.4 bits (233), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 124/237 (52%), Gaps = 14/237 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4026 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4084

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4085 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4143

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4144 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4200

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+V
Sbjct: 4201 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHV 4255



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 70/225 (31%), Positives = 110/225 (48%), Gaps = 7/225 (3%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 4088 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTS 4146

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHT 239
             G++FT G+      G  +T+     P  V AL+G    QV  GLN T  ++  G  V  
Sbjct: 4147 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 4205

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ +  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 4206 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 4264

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             L  G   +  +P+ I      G+ +  V+ G EH +AL S+G V
Sbjct: 4265 GLPEGRARNHNRPQQIPVL--AGVVIEDVAVGAEHTLALASTGDV 4307



 Score = 84.3 bits (207), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 79/222 (35%), Positives = 113/222 (50%), Gaps = 15/222 (6%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 298 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             CLG G  +   L+P+ I+        +V +S GD H +AL
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLAL 680



 Score = 67.8 bits (164), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 110/234 (47%), Gaps = 38/234 (16%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS----AAHVVQVSASENHA 175
           R+   +  +  +++ G    G LGHG   ++       N P+     ++V +VS   +H 
Sbjct: 521 RHSAAVTEDGELYTWGEGDFGRLGHGDSNSR-------NIPTLVKDISNVGEVSCGSSHT 573

Query: 176 AFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             + + G+    F  GDN     GH DTNR +++P+++EAL+G+  ++V AG   +  LT
Sbjct: 574 IALSKDGRTVWSFGGGDNGKL--GHGDTNR-VYKPKVIEALQGMFIRKVCAGSQSSLALT 630

Query: 233 IRGHVHT--------CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             G V+         CGS+    L          PK I  L     +V I+ G S+ LA+
Sbjct: 631 STGQVYAWGCGACLGCGSSEATAL---------RPKLIEELAAT-RIVDISIGDSHCLAL 680

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           + +  VY++G+ S    G G     + +P+ +      GI + ++SAG  H +A
Sbjct: 681 SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGL--DGIAIQQISAGTSHSLA 732



 Score = 64.3 bits (155), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 105/229 (45%), Gaps = 13/229 (5%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ ++ S+  +F+ G+   G LG G  + + +   R+       + QV+   
Sbjct: 4132 VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 4190

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G +   F  GD      G+         P+ V+ L G+  K+V  G  F+ 
Sbjct: 4191 NHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS---SPQKVDVLCGIGIKKVACGTQFSV 4247

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNG 288
             LT  GHV+T G +    L  G   +   P+ I  L   G V++ +A G  + LA+   G
Sbjct: 4248 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVL--AGVVIEDVAVGAEHTLALASTG 4305

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             VY++GS S   LG G  +   +P  +     +G +V ++SAG  H  A
Sbjct: 4306 DVYAWGSNSEGQLGLGHTNHVREPTLVTVL--QGKNVRQISAGRCHSAA 4352



 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 72/254 (28%), Positives = 108/254 (42%), Gaps = 20/254 (7%)

Query: 96  FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSF 154
           F +    +SD   T A    I TG   T ++S +  V+  GS+    L  G   TQ    
Sbjct: 340 FEEVCRMASDYSRTCASPDSIQTG--DTPIVSETCEVYVWGSNSSHQLVEG---TQEKIL 394

Query: 155 TRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPR 208
                PS +    + A +     +   G V  CG  S    G  D+N      +  F P 
Sbjct: 395 QPKLAPSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH 454

Query: 209 LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 268
              ++K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    + 
Sbjct: 455 --RSIKKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQG 510

Query: 269 GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 328
             VV ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  V
Sbjct: 511 KVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEV 566

Query: 329 SAGDEHVVALDSSG 342
           S G  H +AL   G
Sbjct: 567 SCGSSHTIALSKDG 580



 Score = 58.5 bits (140), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 84/175 (48%), Gaps = 7/175 (4%)

Query: 115 QITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++ G  HT+ +S    +V+S G    G LGHG +T +      I       + +V A  
Sbjct: 565 EVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEALQGMFIRKVCAGS 623

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             +  +  +GQV+  G  +   CG  +      RP+L+E L       ++ G +    L+
Sbjct: 624 QSSLALTSTGQVYAWGCGACLGCGSSEAT--ALRPKLIEELAATRIVDISIGDSHCLALS 681

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
               V+  G+N+ GQ G G++    T PK ++ L+ + ++ QI+AG S+ LA T 
Sbjct: 682 HDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI-AIQQISAGTSHSLAWTA 735



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 65/128 (50%), Gaps = 4/128 (3%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 4025 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4084

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H  
Sbjct: 4085 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 4142

Query: 337  ALDSSGYV 344
             + S G +
Sbjct: 4143 VVTSDGKL 4150



 Score = 48.5 bits (114), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 79/180 (43%), Gaps = 11/180 (6%)

Query: 115  QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HTL +S   S V++ G    G LG G  T +  S  +++      + +V+   
Sbjct: 4185 QVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKVDVLCGIGIKKVACGT 4243

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + +  L GV  + V  G   T 
Sbjct: 4244 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQIPVLAGVVIEDVAVGAEHTL 4299

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L   G V+  GSN+ GQLG G T     P  +  L+   +V QI+AG  +  A T   V
Sbjct: 4300 ALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQG-KNVRQISAGRCHSAAWTAPPV 4358


>gi|397515719|ref|XP_003828093.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Pan
           paniscus]
          Length = 4798

 Score =  100 bits (250), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 73/235 (31%), Positives = 124/235 (52%), Gaps = 13/235 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           V+SFG G N  LGHG+ +   +P+ I+    +G+ + +V AG +  +AL S+G V
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEAL--QGMFIRKVCAGSQSSLALTSTGQV 635



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 75/237 (31%), Positives = 124/237 (52%), Gaps = 14/237 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 3968 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4026

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4027 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4085

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4086 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSVDG 4142

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             +V++FG G    LG G    +  P+ I      GI + +V+ G +  VAL   G+V
Sbjct: 4143 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL--CGIGIKKVACGTQFSVALTKDGHV 4197



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 71/225 (31%), Positives = 111/225 (49%), Gaps = 7/225 (3%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 4030 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTS 4088

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHT 239
             G++FT G+      G  +T+     P  V AL+G    QV  GLN T  +++ G  V  
Sbjct: 4089 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSVDGSMVWA 4147

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ I  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 4148 FGDGDYGKLGLGNSTAKSSPQKIDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 4206

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             L  G   +  +P+ I      G+ +  V+ G EH +AL S+G V
Sbjct: 4207 GLPEGRARNHNRPQQIPVL--AGVIIEDVAVGAEHTLALASNGDV 4249



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 80/222 (36%), Positives = 113/222 (50%), Gaps = 15/222 (6%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 298 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             CLG G  +   L+P+ I+        +V VS GD H +AL
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLAL 680



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 110/234 (47%), Gaps = 38/234 (16%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS----AAHVVQVSASENHA 175
           R+   +  +  +++ G    G LGHG   ++       N P+     ++V +VS   +H 
Sbjct: 521 RHSAAVTEDGELYTWGEGDFGRLGHGDSNSR-------NIPTLVKDISNVGEVSCGSSHT 573

Query: 176 AFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             + + G+    F  GDN     GH DTNR +++P+++EAL+G+  ++V AG   +  LT
Sbjct: 574 IALSKDGRTVWSFGGGDNGKL--GHGDTNR-VYKPKVIEALQGMFIRKVCAGSQSSLALT 630

Query: 233 IRGHVHT--------CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             G V+         CGS+    L          PK I  L     +V ++ G S+ LA+
Sbjct: 631 STGQVYAWGCGACLGCGSSEATAL---------RPKLIEELAAT-RIVDVSIGDSHCLAL 680

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           + +  VY++G+ S    G G     + +P+ +      GI + ++SAG  H +A
Sbjct: 681 SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGL--DGIAIQQISAGTSHSLA 732



 Score = 64.3 bits (155), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 13/229 (5%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ ++ S+  +F+ G+   G LG G  + + +   R+       + QV+   
Sbjct: 4074 VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 4132

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G +   F  GD      G+         P+ ++ L G+  K+V  G  F+ 
Sbjct: 4133 NHTLAVSVDGSMVWAFGDGDYGKLGLGNSTAKS---SPQKIDVLCGIGIKKVACGTQFSV 4189

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNG 288
             LT  GHV+T G +    L  G   +   P+ I  L   G +++ +A G  + LA+  NG
Sbjct: 4190 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVL--AGVIIEDVAVGAEHTLALASNG 4247

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             VY++GS S   LG G  +   +P  +     +G +V ++SAG  H  A
Sbjct: 4248 DVYAWGSNSEGQLGLGHTNHVREPTLVTGL--QGKNVRQISAGRCHSAA 4294



 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 84/189 (44%), Gaps = 14/189 (7%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSG 342
           H +AL   G
Sbjct: 572 HTIALSKDG 580



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 84/175 (48%), Gaps = 7/175 (4%)

Query: 115 QITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++ G  HT+ +S    +V+S G    G LGHG +T +      I       + +V A  
Sbjct: 565 EVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEALQGMFIRKVCAGS 623

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             +  +  +GQV+  G  +   CG  +      RP+L+E L       V+ G +    L+
Sbjct: 624 QSSLALTSTGQVYAWGCGACLGCGSSEAT--ALRPKLIEELAATRIVDVSIGDSHCLALS 681

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
               V+  G+N+ GQ G G++    T PK ++ L+ + ++ QI+AG S+ LA T 
Sbjct: 682 HDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI-AIQQISAGTSHSLAWTA 735



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 65/128 (50%), Gaps = 4/128 (3%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 3967 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4026

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H  
Sbjct: 4027 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 4084

Query: 337  ALDSSGYV 344
             + S G +
Sbjct: 4085 VVTSDGKL 4092



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 53/180 (29%), Positives = 79/180 (43%), Gaps = 11/180 (6%)

Query: 115  QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HTL +S   S V++ G    G LG G  T +  S  +I+      + +V+   
Sbjct: 4127 QVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGNSTAKS-SPQKIDVLCGIGIKKVACGT 4185

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + +  L GV  + V  G   T 
Sbjct: 4186 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQIPVLAGVIIEDVAVGAEHTL 4241

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L   G V+  GSN+ GQLG G T     P  +  L+   +V QI+AG  +  A T   V
Sbjct: 4242 ALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQG-KNVRQISAGRCHSAAWTAPPV 4300


>gi|297296624|ref|XP_002804832.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Macaca
           mulatta]
          Length = 4824

 Score =  100 bits (250), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 73/235 (31%), Positives = 124/235 (52%), Gaps = 13/235 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           V+SFG G N  LGHG+ +   +P+ I+    +G+ + +V AG +  +AL S+G V
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEAL--QGMFIRKVCAGSQSSLALTSTGQV 635



 Score = 95.1 bits (235), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 75/237 (31%), Positives = 124/237 (52%), Gaps = 14/237 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 3994 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4052

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4053 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4111

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4112 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4168

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             +V++FG G    LG G    +  P+ I      GI + +V+ G +  VAL   G+V
Sbjct: 4169 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL--CGIGIKKVACGTQFSVALTKDGHV 4223



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 71/225 (31%), Positives = 110/225 (48%), Gaps = 7/225 (3%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 4056 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTS 4114

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHT 239
             G++FT G+      G  +T+     P  V AL+G    QV  GLN T  ++  G  V  
Sbjct: 4115 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 4173

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ I  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 4174 FGDGDYGKLGLGNSTAKSSPQKIDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 4232

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             L  G   +  +P+ I      G+ +  V+ G EH +AL S+G V
Sbjct: 4233 GLPEGRARNHNRPQQIPVL--AGMIIEDVAVGAEHTLALASNGDV 4275



 Score = 84.7 bits (208), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 80/222 (36%), Positives = 113/222 (50%), Gaps = 15/222 (6%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 298 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             CLG G  +   L+P+ I+        +V VS GD H +AL
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLAL 680



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 110/234 (47%), Gaps = 38/234 (16%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS----AAHVVQVSASENHA 175
           R+   +  +  +++ G    G LGHG   ++       N P+     ++V +VS   +H 
Sbjct: 521 RHSAAVTEDGELYTWGEGDFGRLGHGDSNSR-------NIPTLVKDISNVGEVSCGSSHT 573

Query: 176 AFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             + + G+    F  GDN     GH DTNR +++P+++EAL+G+  ++V AG   +  LT
Sbjct: 574 IALSKDGRTVWSFGGGDNGKL--GHGDTNR-VYKPKVIEALQGMFIRKVCAGSQSSLALT 630

Query: 233 IRGHVHT--------CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             G V+         CGS+    L          PK I  L     +V ++ G S+ LA+
Sbjct: 631 STGQVYAWGCGACLGCGSSEATAL---------RPKLIEELAAT-RIVDVSIGDSHCLAL 680

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           + +  VY++G+ S    G G     + +P+ +      GI + ++SAG  H +A
Sbjct: 681 SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGL--DGIAIQQISAGTSHSLA 732



 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 13/229 (5%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ ++ S+  +F+ G+   G LG G  + + +   R+       + QV+   
Sbjct: 4100 VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 4158

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G +   F  GD      G+         P+ ++ L G+  K+V  G  F+ 
Sbjct: 4159 NHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS---SPQKIDVLCGIGIKKVACGTQFSV 4215

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNG 288
             LT  GHV+T G +    L  G   +   P+ I  L   G +++ +A G  + LA+  NG
Sbjct: 4216 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVL--AGMIIEDVAVGAEHTLALASNG 4273

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             VY++GS S   LG G  +   +P  +     +G +V ++SAG  H  A
Sbjct: 4274 DVYAWGSNSEGQLGLGHTNHVREPTLVTGL--QGKNVRQISAGRCHSAA 4320



 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 84/189 (44%), Gaps = 14/189 (7%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSG 342
           H +AL   G
Sbjct: 572 HTIALSKDG 580



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 84/175 (48%), Gaps = 7/175 (4%)

Query: 115 QITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++ G  HT+ +S    +V+S G    G LGHG +T +      I       + +V A  
Sbjct: 565 EVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEALQGMFIRKVCAGS 623

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             +  +  +GQV+  G  +   CG  +      RP+L+E L       V+ G +    L+
Sbjct: 624 QSSLALTSTGQVYAWGCGACLGCGSSEAT--ALRPKLIEELAATRIVDVSIGDSHCLALS 681

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
               V+  G+N+ GQ G G++    T PK ++ L+ + ++ QI+AG S+ LA T 
Sbjct: 682 HDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI-AIQQISAGTSHSLAWTA 735



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 65/128 (50%), Gaps = 4/128 (3%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 3993 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4052

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H  
Sbjct: 4053 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 4110

Query: 337  ALDSSGYV 344
             + S G +
Sbjct: 4111 VVTSDGKL 4118



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 92/218 (42%), Gaps = 14/218 (6%)

Query: 115  QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HTL +S   S V++ G    G LG G  T +  S  +I+      + +V+   
Sbjct: 4153 QVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKIDVLCGIGIKKVACGT 4211

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + +  L G+  + V  G   T 
Sbjct: 4212 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQIPVLAGMIIEDVAVGAEHTL 4267

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L   G V+  GSN+ GQLG G T     P  +  L+   +V QI+AG  +  A T   V
Sbjct: 4268 ALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQG-KNVRQISAGRCHSAAWTAPPV 4326

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR 327
                  G +  L  G   D L P+     R   IH VR
Sbjct: 4327 P-PRAPGVSVPLQLG-LPDTLPPQ-YGALREVSIHTVR 4361


>gi|297696825|ref|XP_002825580.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC1 [Pongo abelii]
          Length = 4864

 Score =  100 bits (250), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 73/235 (31%), Positives = 124/235 (52%), Gaps = 13/235 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           V+SFG G N  LGHG+ +   +P+ I+    +G+ + +V AG +  +AL S+G V
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEAL--QGMFIRKVCAGSQSSLALTSTGQV 635



 Score = 95.1 bits (235), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 75/237 (31%), Positives = 124/237 (52%), Gaps = 14/237 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4034 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4092

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4093 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4151

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4152 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4208

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             +V++FG G    LG G    +  P+ I      GI + +V+ G +  VAL   G+V
Sbjct: 4209 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL--CGIGIKKVACGTQFSVALTKDGHV 4263



 Score = 85.1 bits (209), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 71/225 (31%), Positives = 110/225 (48%), Gaps = 7/225 (3%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 4096 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTS 4154

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHT 239
             G++FT G+      G  +T+     P  V AL+G    QV  GLN T  ++  G  V  
Sbjct: 4155 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 4213

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ I  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 4214 FGDGDYGKLGLGNSTAKSSPQKIDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 4272

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             L  G   +  +P+ I      G+ +  V+ G EH +AL S+G V
Sbjct: 4273 GLPEGRARNHNRPQQIPLL--AGVIIEDVAVGAEHTLALASNGDV 4315



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 80/222 (36%), Positives = 113/222 (50%), Gaps = 15/222 (6%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 298 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             CLG G  +   L+P+ I+        +V VS GD H +AL
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLAL 680



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 110/234 (47%), Gaps = 38/234 (16%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS----AAHVVQVSASENHA 175
           R+   +  +  +++ G    G LGHG   ++       N P+     ++V +VS   +H 
Sbjct: 521 RHSAAVTEDGELYTWGEGDFGRLGHGDSNSR-------NIPTLVKDISNVGEVSCGSSHT 573

Query: 176 AFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             + + G+    F  GDN     GH DTNR +++P+++EAL+G+  ++V AG   +  LT
Sbjct: 574 IALSKDGRTVWSFGGGDNGKL--GHGDTNR-VYKPKVIEALQGMFIRKVCAGSQSSLALT 630

Query: 233 IRGHVHT--------CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             G V+         CGS+    L          PK I  L     +V ++ G S+ LA+
Sbjct: 631 STGQVYAWGCGACLGCGSSEATAL---------RPKLIEELAAT-RIVDVSIGDSHCLAL 680

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           + +  VY++G+ S    G G     + +P+ +      GI + ++SAG  H +A
Sbjct: 681 SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGL--DGIAIQQISAGTSHSLA 732



 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 13/229 (5%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ ++ S+  +F+ G+   G LG G  + + +   R+       + QV+   
Sbjct: 4140 VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 4198

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G +   F  GD      G+         P+ ++ L G+  K+V  G  F+ 
Sbjct: 4199 NHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS---SPQKIDVLCGIGIKKVACGTQFSV 4255

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNG 288
             LT  GHV+T G +    L  G   +   P+ I  L   G +++ +A G  + LA+  NG
Sbjct: 4256 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPLL--AGVIIEDVAVGAEHTLALASNG 4313

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             VY++GS S   LG G  +   +P  +     +G +V ++SAG  H  A
Sbjct: 4314 DVYAWGSNSEGQLGLGHTNHVREPTLVTGL--QGKNVRQISAGRCHSAA 4360



 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 84/189 (44%), Gaps = 14/189 (7%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSG 342
           H +AL   G
Sbjct: 572 HTIALSKDG 580



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 84/175 (48%), Gaps = 7/175 (4%)

Query: 115 QITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++ G  HT+ +S    +V+S G    G LGHG +T +      I       + +V A  
Sbjct: 565 EVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEALQGMFIRKVCAGS 623

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             +  +  +GQV+  G  +   CG  +      RP+L+E L       V+ G +    L+
Sbjct: 624 QSSLALTSTGQVYAWGCGACLGCGSSEAT--ALRPKLIEELAATRIVDVSIGDSHCLALS 681

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
               V+  G+N+ GQ G G++    T PK ++ L+ + ++ QI+AG S+ LA T 
Sbjct: 682 HDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI-AIQQISAGTSHSLAWTA 735



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 65/128 (50%), Gaps = 4/128 (3%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 4033 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4092

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H  
Sbjct: 4093 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 4150

Query: 337  ALDSSGYV 344
             + S G +
Sbjct: 4151 VVTSDGKL 4158



 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 53/180 (29%), Positives = 79/180 (43%), Gaps = 11/180 (6%)

Query: 115  QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HTL +S   S V++ G    G LG G  T +  S  +I+      + +V+   
Sbjct: 4193 QVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKIDVLCGIGIKKVACGT 4251

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + +  L GV  + V  G   T 
Sbjct: 4252 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQIPLLAGVIIEDVAVGAEHTL 4307

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L   G V+  GSN+ GQLG G T     P  +  L+   +V QI+AG  +  A T   V
Sbjct: 4308 ALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQG-KNVRQISAGRCHSAAWTAPPV 4366


>gi|126131099|ref|NP_003913.3| probable E3 ubiquitin-protein ligase HERC1 [Homo sapiens]
 gi|296434522|sp|Q15751.2|HERC1_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC1; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           1; AltName: Full=p532; AltName: Full=p619
 gi|119598061|gb|EAW77655.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
           RCC1 (CHC1)-like domain (RLD) 1, isoform CRA_b [Homo
           sapiens]
 gi|119598062|gb|EAW77656.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
           RCC1 (CHC1)-like domain (RLD) 1, isoform CRA_b [Homo
           sapiens]
          Length = 4861

 Score =  100 bits (250), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 73/235 (31%), Positives = 124/235 (52%), Gaps = 13/235 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           V+SFG G N  LGHG+ +   +P+ I+    +G+ + +V AG +  +AL S+G V
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEAL--QGMFIRKVCAGSQSSLALTSTGQV 635



 Score = 95.1 bits (235), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 75/237 (31%), Positives = 124/237 (52%), Gaps = 14/237 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4089

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4090 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4148

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4149 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4205

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             +V++FG G    LG G    +  P+ I      GI + +V+ G +  VAL   G+V
Sbjct: 4206 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL--CGIGIKKVACGTQFSVALTKDGHV 4260



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 71/225 (31%), Positives = 110/225 (48%), Gaps = 7/225 (3%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 4093 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTS 4151

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHT 239
             G++FT G+      G  +T+     P  V AL+G    QV  GLN T  ++  G  V  
Sbjct: 4152 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 4210

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ I  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 4211 FGDGDYGKLGLGNSTAKSSPQKIDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 4269

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             L  G   +  +P+ I      G+ +  V+ G EH +AL S+G V
Sbjct: 4270 GLPEGRARNHNRPQQIPVL--AGVIIEDVAVGAEHTLALASNGDV 4312



 Score = 84.7 bits (208), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 80/222 (36%), Positives = 113/222 (50%), Gaps = 15/222 (6%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 298 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             CLG G  +   L+P+ I+        +V VS GD H +AL
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLAL 680



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 110/234 (47%), Gaps = 38/234 (16%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS----AAHVVQVSASENHA 175
           R+   +  +  +++ G    G LGHG   ++       N P+     ++V +VS   +H 
Sbjct: 521 RHSAAVTEDGELYTWGEGDFGRLGHGDSNSR-------NIPTLVKDISNVGEVSCGSSHT 573

Query: 176 AFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             + + G+    F  GDN     GH DTNR +++P+++EAL+G+  ++V AG   +  LT
Sbjct: 574 IALSKDGRTVWSFGGGDNGKL--GHGDTNR-VYKPKVIEALQGMFIRKVCAGSQSSLALT 630

Query: 233 IRGHVHT--------CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             G V+         CGS+    L          PK I  L     +V ++ G S+ LA+
Sbjct: 631 STGQVYAWGCGACLGCGSSEATAL---------RPKLIEELAAT-RIVDVSIGDSHCLAL 680

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           + +  VY++G+ S    G G     + +P+ +      GI + ++SAG  H +A
Sbjct: 681 SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGL--DGIAIQQISAGTSHSLA 732



 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 13/229 (5%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ ++ S+  +F+ G+   G LG G  + + +   R+       + QV+   
Sbjct: 4137 VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 4195

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G +   F  GD      G+         P+ ++ L G+  K+V  G  F+ 
Sbjct: 4196 NHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS---SPQKIDVLCGIGIKKVACGTQFSV 4252

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNG 288
             LT  GHV+T G +    L  G   +   P+ I  L   G +++ +A G  + LA+  NG
Sbjct: 4253 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVL--AGVIIEDVAVGAEHTLALASNG 4310

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             VY++GS S   LG G  +   +P  +     +G +V ++SAG  H  A
Sbjct: 4311 DVYAWGSNSEGQLGLGHTNHVREPTLVTGL--QGKNVRQISAGRCHSAA 4357



 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 84/189 (44%), Gaps = 14/189 (7%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSG 342
           H +AL   G
Sbjct: 572 HTIALSKDG 580



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 84/175 (48%), Gaps = 7/175 (4%)

Query: 115 QITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++ G  HT+ +S    +V+S G    G LGHG +T +      I       + +V A  
Sbjct: 565 EVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEALQGMFIRKVCAGS 623

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             +  +  +GQV+  G  +   CG  +      RP+L+E L       V+ G +    L+
Sbjct: 624 QSSLALTSTGQVYAWGCGACLGCGSSEAT--ALRPKLIEELAATRIVDVSIGDSHCLALS 681

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
               V+  G+N+ GQ G G++    T PK ++ L+ + ++ QI+AG S+ LA T 
Sbjct: 682 HDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI-AIQQISAGTSHSLAWTA 735



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 65/128 (50%), Gaps = 4/128 (3%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 4030 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4089

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H  
Sbjct: 4090 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 4147

Query: 337  ALDSSGYV 344
             + S G +
Sbjct: 4148 VVTSDGKL 4155



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 53/180 (29%), Positives = 79/180 (43%), Gaps = 11/180 (6%)

Query: 115  QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HTL +S   S V++ G    G LG G  T +  S  +I+      + +V+   
Sbjct: 4190 QVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKIDVLCGIGIKKVACGT 4248

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + +  L GV  + V  G   T 
Sbjct: 4249 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQIPVLAGVIIEDVAVGAEHTL 4304

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L   G V+  GSN+ GQLG G T     P  +  L+   +V QI+AG  +  A T   V
Sbjct: 4305 ALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQG-KNVRQISAGRCHSAAWTAPPV 4363


>gi|355692784|gb|EHH27387.1| hypothetical protein EGK_17574 [Macaca mulatta]
          Length = 4862

 Score =  100 bits (250), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 73/235 (31%), Positives = 124/235 (52%), Gaps = 13/235 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           V+SFG G N  LGHG+ +   +P+ I+    +G+ + +V AG +  +AL S+G V
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEAL--QGMFIRKVCAGSQSSLALTSTGQV 635



 Score = 95.1 bits (235), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 75/237 (31%), Positives = 124/237 (52%), Gaps = 14/237 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4089

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4090 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4148

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4149 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4205

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             +V++FG G    LG G    +  P+ I      GI + +V+ G +  VAL   G+V
Sbjct: 4206 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL--CGIGIKKVACGTQFSVALTKDGHV 4260



 Score = 84.7 bits (208), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 71/225 (31%), Positives = 110/225 (48%), Gaps = 7/225 (3%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 4093 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTS 4151

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHT 239
             G++FT G+      G  +T+     P  V AL+G    QV  GLN T  ++  G  V  
Sbjct: 4152 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 4210

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ I  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 4211 FGDGDYGKLGLGNSTAKSSPQKIDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 4269

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             L  G   +  +P+ I      G+ +  V+ G EH +AL S+G V
Sbjct: 4270 GLPEGRARNHNRPQQIPVL--AGMIIEDVAVGAEHTLALASNGDV 4312



 Score = 84.7 bits (208), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 80/222 (36%), Positives = 113/222 (50%), Gaps = 15/222 (6%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 298 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             CLG G  +   L+P+ I+        +V VS GD H +AL
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLAL 680



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 110/234 (47%), Gaps = 38/234 (16%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS----AAHVVQVSASENHA 175
           R+   +  +  +++ G    G LGHG   ++       N P+     ++V +VS   +H 
Sbjct: 521 RHSAAVTEDGELYTWGEGDFGRLGHGDSNSR-------NIPTLVKDISNVGEVSCGSSHT 573

Query: 176 AFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             + + G+    F  GDN     GH DTNR +++P+++EAL+G+  ++V AG   +  LT
Sbjct: 574 IALSKDGRTVWSFGGGDNGKL--GHGDTNR-VYKPKVIEALQGMFIRKVCAGSQSSLALT 630

Query: 233 IRGHVHT--------CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             G V+         CGS+    L          PK I  L     +V ++ G S+ LA+
Sbjct: 631 STGQVYAWGCGACLGCGSSEATAL---------RPKLIEELAAT-RIVDVSIGDSHCLAL 680

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           + +  VY++G+ S    G G     + +P+ +      GI + ++SAG  H +A
Sbjct: 681 SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGL--DGIAIQQISAGTSHSLA 732



 Score = 65.1 bits (157), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 105/229 (45%), Gaps = 13/229 (5%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ ++ S+  +F+ G+   G LG G  + + +   R+       + QV+   
Sbjct: 4137 VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 4195

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G +   F  GD      G+         P+ ++ L G+  K+V  G  F+ 
Sbjct: 4196 NHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS---SPQKIDVLCGIGIKKVACGTQFSV 4252

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNG 288
             LT  GHV+T G +    L  G   +   P+ I  L   G +++ +A G  + LA+  NG
Sbjct: 4253 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVL--AGMIIEDVAVGAEHTLALASNG 4310

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             VY++GS S   LG G  +   +P  +   + K I   ++SAG  H  A
Sbjct: 4311 DVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNIR--QISAGRCHSAA 4357



 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 84/189 (44%), Gaps = 14/189 (7%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSG 342
           H +AL   G
Sbjct: 572 HTIALSKDG 580



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 84/175 (48%), Gaps = 7/175 (4%)

Query: 115 QITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++ G  HT+ +S    +V+S G    G LGHG +T +      I       + +V A  
Sbjct: 565 EVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEALQGMFIRKVCAGS 623

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             +  +  +GQV+  G  +   CG  +      RP+L+E L       V+ G +    L+
Sbjct: 624 QSSLALTSTGQVYAWGCGACLGCGSSEAT--ALRPKLIEELAATRIVDVSIGDSHCLALS 681

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
               V+  G+N+ GQ G G++    T PK ++ L+ + ++ QI+AG S+ LA T 
Sbjct: 682 HDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI-AIQQISAGTSHSLAWTA 735



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 65/128 (50%), Gaps = 4/128 (3%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 4030 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4089

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H  
Sbjct: 4090 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 4147

Query: 337  ALDSSGYV 344
             + S G +
Sbjct: 4148 VVTSDGKL 4155



 Score = 47.8 bits (112), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 92/218 (42%), Gaps = 14/218 (6%)

Query: 115  QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HTL +S   S V++ G    G LG G  T +  S  +I+      + +V+   
Sbjct: 4190 QVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKIDVLCGIGIKKVACGT 4248

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + +  L G+  + V  G   T 
Sbjct: 4249 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQIPVLAGMIIEDVAVGAEHTL 4304

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L   G V+  GSN+ GQLG G T     P  +  L+   ++ QI+AG  +  A T   V
Sbjct: 4305 ALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQG-KNIRQISAGRCHSAAWTAPPV 4363

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR 327
                  G +  L  G   D L P+     R   IH VR
Sbjct: 4364 P-PRAPGVSVPLQLG-LPDTLPPQ-YGALREVSIHTVR 4398


>gi|1477565|gb|AAD12586.1| p532 [Homo sapiens]
          Length = 4861

 Score =  100 bits (250), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 73/235 (31%), Positives = 124/235 (52%), Gaps = 13/235 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           V+SFG G N  LGHG+ +   +P+ I+    +G+ + +V AG +  +AL S+G V
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEAL--QGMFIRKVCAGSQSSLALTSTGQV 635



 Score = 95.1 bits (235), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 75/237 (31%), Positives = 124/237 (52%), Gaps = 14/237 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4089

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4090 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4148

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4149 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4205

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             +V++FG G    LG G    +  P+ I      GI + +V+ G +  VAL   G+V
Sbjct: 4206 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL--CGIGIKKVACGTQFSVALTKDGHV 4260



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 71/225 (31%), Positives = 110/225 (48%), Gaps = 7/225 (3%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 4093 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTS 4151

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHT 239
             G++FT G+      G  +T+     P  V AL+G    QV  GLN T  ++  G  V  
Sbjct: 4152 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 4210

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ I  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 4211 FGDGDYGKLGLGNSTAKSSPQKIDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 4269

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             L  G   +  +P+ I      G+ +  V+ G EH +AL S+G V
Sbjct: 4270 GLPEGRARNHNRPQQIPVL--AGVIIEDVAVGAEHTLALASNGDV 4312



 Score = 84.7 bits (208), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 80/222 (36%), Positives = 113/222 (50%), Gaps = 15/222 (6%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 298 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             CLG G  +   L+P+ I+        +V VS GD H +AL
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLAL 680



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 110/234 (47%), Gaps = 38/234 (16%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS----AAHVVQVSASENHA 175
           R+   +  +  +++ G    G LGHG   ++       N P+     ++V +VS   +H 
Sbjct: 521 RHSAAVTEDGELYTWGEGDFGRLGHGDSNSR-------NIPTLVKDISNVGEVSCGSSHT 573

Query: 176 AFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             + + G+    F  GDN     GH DTNR +++P+++EAL+G+  ++V AG   +  LT
Sbjct: 574 IALSKDGRTVWSFGGGDNGKL--GHGDTNR-VYKPKVIEALQGMFIRKVCAGSQSSLALT 630

Query: 233 IRGHVHT--------CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             G V+         CGS+    L          PK I  L     +V ++ G S+ LA+
Sbjct: 631 STGQVYAWGCGACLGCGSSEATAL---------RPKLIEELAAT-RIVDVSIGDSHCLAL 680

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           + +  VY++G+ S    G G     + +P+ +      GI + ++SAG  H +A
Sbjct: 681 SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGL--DGIAIQQISAGTSHSLA 732



 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 13/229 (5%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ ++ S+  +F+ G+   G LG G  + + +   R+       + QV+   
Sbjct: 4137 VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 4195

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G +   F  GD      G+         P+ ++ L G+  K+V  G  F+ 
Sbjct: 4196 NHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS---SPQKIDVLCGIGIKKVACGTQFSV 4252

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNG 288
             LT  GHV+T G +    L  G   +   P+ I  L   G +++ +A G  + LA+  NG
Sbjct: 4253 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVL--AGVIIEDVAVGAEHTLALASNG 4310

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             VY++GS S   LG G  +   +P  +     +G +V ++SAG  H  A
Sbjct: 4311 DVYAWGSNSEGQLGLGHTNHVREPTLVTGL--QGKNVRQISAGRCHSAA 4357



 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 84/189 (44%), Gaps = 14/189 (7%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSG 342
           H +AL   G
Sbjct: 572 HTIALSKDG 580



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 84/175 (48%), Gaps = 7/175 (4%)

Query: 115 QITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++ G  HT+ +S    +V+S G    G LGHG +T +      I       + +V A  
Sbjct: 565 EVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEALQGMFIRKVCAGS 623

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             +  +  +GQV+  G  +   CG  +      RP+L+E L       V+ G +    L+
Sbjct: 624 QSSLALTSTGQVYAWGCGACLGCGSSEAT--ALRPKLIEELAATRIVDVSIGDSHCLALS 681

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
               V+  G+N+ GQ G G++    T PK ++ L+ + ++ QI+AG S+ LA T 
Sbjct: 682 HDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI-AIQQISAGTSHSLAWTA 735



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 65/128 (50%), Gaps = 4/128 (3%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 4030 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4089

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H  
Sbjct: 4090 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 4147

Query: 337  ALDSSGYV 344
             + S G +
Sbjct: 4148 VVTSDGKL 4155



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 53/180 (29%), Positives = 79/180 (43%), Gaps = 11/180 (6%)

Query: 115  QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HTL +S   S V++ G    G LG G  T +  S  +I+      + +V+   
Sbjct: 4190 QVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKIDVLCGIGIKKVACGT 4248

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + +  L GV  + V  G   T 
Sbjct: 4249 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQIPVLAGVIIEDVAVGAEHTL 4304

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L   G V+  GSN+ GQLG G T     P  +  L+   +V QI+AG  +  A T   V
Sbjct: 4305 ALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQG-KNVRQISAGRCHSAAWTAPPV 4363


>gi|431895932|gb|ELK05350.1| Putative E3 ubiquitin-protein ligase HERC1 [Pteropus alecto]
          Length = 4850

 Score =  100 bits (250), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 73/235 (31%), Positives = 124/235 (52%), Gaps = 13/235 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           V+SFG G N  LGHG+ +   +P+ I+    +G+ + +V AG +  +AL S+G V
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEAL--QGMFIRKVCAGSQSSLALTSTGQV 635



 Score = 94.4 bits (233), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 124/237 (52%), Gaps = 14/237 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4020 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4078

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4079 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4137

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4138 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4194

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+V
Sbjct: 4195 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHV 4249



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 70/225 (31%), Positives = 110/225 (48%), Gaps = 7/225 (3%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 4082 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTS 4140

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHT 239
             G++FT G+      G  +T+     P  V AL+G    QV  GLN T  ++  G  V  
Sbjct: 4141 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 4199

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ +  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 4200 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 4258

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             L  G   +  +P+ I      G+ +  V+ G EH +AL S+G V
Sbjct: 4259 GLPEGRARNHNRPQQIPVL--AGVVIEDVAVGAEHTLALASTGDV 4301



 Score = 84.3 bits (207), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 79/222 (35%), Positives = 113/222 (50%), Gaps = 15/222 (6%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 298 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             CLG G  +   L+P+ I+        +V +S GD H +AL
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLAL 680



 Score = 67.8 bits (164), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 110/234 (47%), Gaps = 38/234 (16%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS----AAHVVQVSASENHA 175
           R+   +  +  +++ G    G LGHG   ++       N P+     ++V +VS   +H 
Sbjct: 521 RHSAAVTEDGELYTWGEGDFGRLGHGDSNSR-------NIPTLVKDISNVGEVSCGSSHT 573

Query: 176 AFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             + + G+    F  GDN     GH DTNR +++P+++EAL+G+  ++V AG   +  LT
Sbjct: 574 IALSKDGRTVWSFGGGDNGKL--GHGDTNR-VYKPKVIEALQGMFIRKVCAGSQSSLALT 630

Query: 233 IRGHVHT--------CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             G V+         CGS+    L          PK I  L     +V I+ G S+ LA+
Sbjct: 631 STGQVYAWGCGACLGCGSSEATAL---------RPKLIEELAAT-RIVDISIGDSHCLAL 680

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           + +  VY++G+ S    G G     + +P+ +      GI + ++SAG  H +A
Sbjct: 681 SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGL--DGIAIQQISAGTSHSLA 732



 Score = 64.3 bits (155), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 105/229 (45%), Gaps = 13/229 (5%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ ++ S+  +F+ G+   G LG G  + + +   R+       + QV+   
Sbjct: 4126 VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 4184

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G +   F  GD      G+         P+ V+ L G+  K+V  G  F+ 
Sbjct: 4185 NHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS---SPQKVDVLCGIGIKKVACGTQFSV 4241

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNG 288
             LT  GHV+T G +    L  G   +   P+ I  L   G V++ +A G  + LA+   G
Sbjct: 4242 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVL--AGVVIEDVAVGAEHTLALASTG 4299

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             VY++GS S   LG G  +   +P  +     +G +V ++SAG  H  A
Sbjct: 4300 DVYAWGSNSEGQLGLGHTNHVREPTLVTVL--QGKNVRQISAGRCHSAA 4346



 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 84/189 (44%), Gaps = 14/189 (7%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSG 342
           H +AL   G
Sbjct: 572 HTIALSKDG 580



 Score = 58.5 bits (140), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 84/175 (48%), Gaps = 7/175 (4%)

Query: 115 QITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++ G  HT+ +S    +V+S G    G LGHG +T +      I       + +V A  
Sbjct: 565 EVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEALQGMFIRKVCAGS 623

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             +  +  +GQV+  G  +   CG  +      RP+L+E L       ++ G +    L+
Sbjct: 624 QSSLALTSTGQVYAWGCGACLGCGSSEAT--ALRPKLIEELAATRIVDISIGDSHCLALS 681

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
               V+  G+N+ GQ G G++    T PK ++ L+ + ++ QI+AG S+ LA T 
Sbjct: 682 HDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI-AIQQISAGTSHSLAWTA 735



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 65/128 (50%), Gaps = 4/128 (3%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 4019 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4078

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H  
Sbjct: 4079 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 4136

Query: 337  ALDSSGYV 344
             + S G +
Sbjct: 4137 VVTSDGKL 4144



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 79/180 (43%), Gaps = 11/180 (6%)

Query: 115  QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HTL +S   S V++ G    G LG G  T +  S  +++      + +V+   
Sbjct: 4179 QVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKVDVLCGIGIKKVACGT 4237

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + +  L GV  + V  G   T 
Sbjct: 4238 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQIPVLAGVVIEDVAVGAEHTL 4293

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L   G V+  GSN+ GQLG G T     P  +  L+   +V QI+AG  +  A T   V
Sbjct: 4294 ALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQG-KNVRQISAGRCHSAAWTAPPV 4352


>gi|74213730|dbj|BAC39029.2| unnamed protein product [Mus musculus]
          Length = 1203

 Score =  100 bits (250), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 73/235 (31%), Positives = 124/235 (52%), Gaps = 13/235 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           V+SFG G N  LGHG+ +   +P+ I+    +G+ + +V AG +  +AL S+G V
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEAL--QGMFIRKVCAGSQSSLALTSTGQV 635



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 78/222 (35%), Positives = 113/222 (50%), Gaps = 15/222 (6%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 298 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             CLG G  +   L+P+ I+        +V +S GD H ++L
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLSL 680



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 124/262 (47%), Gaps = 34/262 (12%)

Query: 87  NGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGP 146
           N + ++  + +Q       +V  SAG       R+   +  +  +++ G    G LGHG 
Sbjct: 494 NSSTQKYPKLIQGPLQGKVVVCVSAGY------RHSAAVTEDGELYTWGEGDFGRLGHGD 547

Query: 147 ETTQCVSFTRINFPS----AAHVVQVSASENHAAFVLQSGQV---FTCGDNSSFCCGHRD 199
             ++       N P+     ++V +VS   +H   + + G+    F  GDN     GH D
Sbjct: 548 SNSR-------NIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKL--GHGD 598

Query: 200 TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD-TLDRPT 258
           TNR +++P+++EAL+G+  ++V AG   +  LT  G V+  G       G  + T  RP 
Sbjct: 599 TNR-VYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRPK 657

Query: 259 PKSIAPLEEVGS--VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL-QPRAI 315
                 +EE+ +  +V I+ G S+ L+++ +  VY++G+ S    G G     + +P+ +
Sbjct: 658 L-----IEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712

Query: 316 QTFRRKGIHVVRVSAGDEHVVA 337
                 GI + ++SAG  H +A
Sbjct: 713 SGL--DGIAIQQISAGTSHSLA 732



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 84/189 (44%), Gaps = 14/189 (7%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSG 342
           H +AL   G
Sbjct: 572 HTIALSKDG 580



 Score = 58.5 bits (140), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 84/175 (48%), Gaps = 7/175 (4%)

Query: 115 QITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++ G  HT+ +S    +V+S G    G LGHG +T +      I       + +V A  
Sbjct: 565 EVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEALQGMFIRKVCAGS 623

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             +  +  +GQV+  G  +   CG  +      RP+L+E L       ++ G +    L+
Sbjct: 624 QSSLALTSTGQVYAWGCGACLGCGSSEAT--ALRPKLIEELAATRIVDISIGDSHCLSLS 681

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
               V+  G+N+ GQ G G++    T PK ++ L+ + ++ QI+AG S+ LA T 
Sbjct: 682 HDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI-AIQQISAGTSHSLAWTA 735


>gi|395822793|ref|XP_003784693.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Otolemur
           garnettii]
          Length = 4828

 Score =  100 bits (250), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 73/235 (31%), Positives = 124/235 (52%), Gaps = 13/235 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           V+SFG G N  LGHG+ +   +P+ I+    +G+ + +V AG +  +AL S+G V
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEAL--QGMFIRKVCAGSQSSLALTSTGQV 635



 Score = 94.4 bits (233), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 124/237 (52%), Gaps = 14/237 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 3998 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4056

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4057 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4115

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4116 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4172

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+V
Sbjct: 4173 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHV 4227



 Score = 84.7 bits (208), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 70/225 (31%), Positives = 110/225 (48%), Gaps = 7/225 (3%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 4060 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTS 4118

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHT 239
             G++FT G+      G  +T+     P  V AL+G    QV  GLN T  ++  G  V  
Sbjct: 4119 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 4177

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ +  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 4178 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 4236

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             L  G   +  +P+ I      G+ +  V+ G EH +AL S+G V
Sbjct: 4237 GLPEGRARNHNRPQQIPVL--AGVVIEDVAVGAEHTLALASNGDV 4279



 Score = 84.3 bits (207), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 79/222 (35%), Positives = 113/222 (50%), Gaps = 15/222 (6%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 298 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             CLG G  +   L+P+ I+        +V +S GD H +AL
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLAL 680



 Score = 67.8 bits (164), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 110/234 (47%), Gaps = 38/234 (16%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS----AAHVVQVSASENHA 175
           R+   +  +  +++ G    G LGHG   ++       N P+     ++V +VS   +H 
Sbjct: 521 RHSAAVTEDGELYTWGEGDFGRLGHGDSNSR-------NIPTLVKDISNVGEVSCGSSHT 573

Query: 176 AFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             + + G+    F  GDN     GH DTNR +++P+++EAL+G+  ++V AG   +  LT
Sbjct: 574 IALSKDGRTVWSFGGGDNGKL--GHGDTNR-VYKPKVIEALQGMFIRKVCAGSQSSLALT 630

Query: 233 IRGHVHT--------CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             G V+         CGS+    L          PK I  L     +V I+ G S+ LA+
Sbjct: 631 STGQVYAWGCGACLGCGSSEATAL---------RPKLIEELAAT-RIVDISIGDSHCLAL 680

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           + +  VY++G+ S    G G     + +P+ +      GI + ++SAG  H +A
Sbjct: 681 SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGL--DGIAIQQISAGTSHSLA 732



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 105/229 (45%), Gaps = 13/229 (5%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ ++ S+  +F+ G+   G LG G  + + +   R+       + QV+   
Sbjct: 4104 VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 4162

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G +   F  GD      G+         P+ V+ L G+  K+V  G  F+ 
Sbjct: 4163 NHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS---SPQKVDVLCGIGIKKVACGTQFSV 4219

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNG 288
             LT  GHV+T G +    L  G   +   P+ I  L   G V++ +A G  + LA+  NG
Sbjct: 4220 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVL--AGVVIEDVAVGAEHTLALASNG 4277

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             VY++GS S   LG G  +   +P  +   + K I   ++SAG  H  A
Sbjct: 4278 DVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIR--QISAGRCHSAA 4324



 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 84/189 (44%), Gaps = 14/189 (7%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSG 342
           H +AL   G
Sbjct: 572 HTIALSKDG 580



 Score = 58.5 bits (140), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 84/175 (48%), Gaps = 7/175 (4%)

Query: 115 QITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++ G  HT+ +S    +V+S G    G LGHG +T +      I       + +V A  
Sbjct: 565 EVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEALQGMFIRKVCAGS 623

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             +  +  +GQV+  G  +   CG  +      RP+L+E L       ++ G +    L+
Sbjct: 624 QSSLALTSTGQVYAWGCGACLGCGSSEAT--ALRPKLIEELAATRIVDISIGDSHCLALS 681

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
               V+  G+N+ GQ G G++    T PK ++ L+ + ++ QI+AG S+ LA T 
Sbjct: 682 HDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI-AIQQISAGTSHSLAWTA 735



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 65/128 (50%), Gaps = 4/128 (3%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 3997 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4056

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H  
Sbjct: 4057 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 4114

Query: 337  ALDSSGYV 344
             + S G +
Sbjct: 4115 VVTSDGKL 4122



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 79/180 (43%), Gaps = 11/180 (6%)

Query: 115  QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HTL +S   S V++ G    G LG G  T +  S  +++      + +V+   
Sbjct: 4157 QVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKVDVLCGIGIKKVACGT 4215

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + +  L GV  + V  G   T 
Sbjct: 4216 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQIPVLAGVVIEDVAVGAEHTL 4271

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L   G V+  GSN+ GQLG G T     P  +  L+   ++ QI+AG  +  A T   V
Sbjct: 4272 ALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQG-KNIRQISAGRCHSAAWTAPPV 4330


>gi|410336797|gb|JAA37345.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
           RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
          Length = 4854

 Score =  100 bits (250), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 73/235 (31%), Positives = 124/235 (52%), Gaps = 13/235 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           V+SFG G N  LGHG+ +   +P+ I+    +G+ + +V AG +  +AL S+G V
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEAL--QGMFIRKVCAGSQSSLALTSTGQV 635



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 75/237 (31%), Positives = 124/237 (52%), Gaps = 14/237 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4024 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4082

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4083 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4141

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4142 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSVDG 4198

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             +V++FG G    LG G    +  P+ I      GI + +V+ G +  VAL   G+V
Sbjct: 4199 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL--CGIGIKKVACGTQFSVALTKDGHV 4253



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 71/225 (31%), Positives = 111/225 (49%), Gaps = 7/225 (3%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 4086 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTS 4144

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHT 239
             G++FT G+      G  +T+     P  V AL+G    QV  GLN T  +++ G  V  
Sbjct: 4145 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSVDGSMVWA 4203

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ I  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 4204 FGDGDYGKLGLGNSTAKSSPQKIDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 4262

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             L  G   +  +P+ I      G+ +  V+ G EH +AL S+G V
Sbjct: 4263 GLPEGRARNHNRPQQIPVL--AGVIIEDVAVGAEHTLALASNGDV 4305



 Score = 84.7 bits (208), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 80/222 (36%), Positives = 113/222 (50%), Gaps = 15/222 (6%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 298 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             CLG G  +   L+P+ I+        +V VS GD H +AL
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLAL 680



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 110/234 (47%), Gaps = 38/234 (16%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS----AAHVVQVSASENHA 175
           R+   +  +  +++ G    G LGHG   ++       N P+     ++V +VS   +H 
Sbjct: 521 RHSAAVTEDGELYTWGEGDFGRLGHGDSNSR-------NIPTLVKDISNVGEVSCGSSHT 573

Query: 176 AFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             + + G+    F  GDN     GH DTNR +++P+++EAL+G+  ++V AG   +  LT
Sbjct: 574 IALSKDGRTVWSFGGGDNGKL--GHGDTNR-VYKPKVIEALQGMFIRKVCAGSQSSLALT 630

Query: 233 IRGHVHT--------CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             G V+         CGS+    L          PK I  L     +V ++ G S+ LA+
Sbjct: 631 STGQVYAWGCGACLGCGSSEATAL---------RPKLIEELAAT-RIVDVSIGDSHCLAL 680

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           + +  VY++G+ S    G G     + +P+ +      GI + ++SAG  H +A
Sbjct: 681 SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGL--DGIAIQQISAGTSHSLA 732



 Score = 64.3 bits (155), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 13/229 (5%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ ++ S+  +F+ G+   G LG G  + + +   R+       + QV+   
Sbjct: 4130 VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 4188

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G +   F  GD      G+         P+ ++ L G+  K+V  G  F+ 
Sbjct: 4189 NHTLAVSVDGSMVWAFGDGDYGKLGLGNSTAKS---SPQKIDVLCGIGIKKVACGTQFSV 4245

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNG 288
             LT  GHV+T G +    L  G   +   P+ I  L   G +++ +A G  + LA+  NG
Sbjct: 4246 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVL--AGVIIEDVAVGAEHTLALASNG 4303

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             VY++GS S   LG G  +   +P  +     +G +V ++SAG  H  A
Sbjct: 4304 DVYAWGSNSEGQLGLGHTNHVREPTLVTGL--QGKNVRQISAGRCHSAA 4350



 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 84/189 (44%), Gaps = 14/189 (7%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSG 342
           H +AL   G
Sbjct: 572 HTIALSKDG 580



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 84/175 (48%), Gaps = 7/175 (4%)

Query: 115 QITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++ G  HT+ +S    +V+S G    G LGHG +T +      I       + +V A  
Sbjct: 565 EVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEALQGMFIRKVCAGS 623

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             +  +  +GQV+  G  +   CG  +      RP+L+E L       V+ G +    L+
Sbjct: 624 QSSLALTSTGQVYAWGCGACLGCGSSEAT--ALRPKLIEELAATRIVDVSIGDSHCLALS 681

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
               V+  G+N+ GQ G G++    T PK ++ L+ + ++ QI+AG S+ LA T 
Sbjct: 682 HDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI-AIQQISAGTSHSLAWTA 735



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 65/128 (50%), Gaps = 4/128 (3%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 4023 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4082

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H  
Sbjct: 4083 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 4140

Query: 337  ALDSSGYV 344
             + S G +
Sbjct: 4141 VVTSDGKL 4148



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 53/180 (29%), Positives = 79/180 (43%), Gaps = 11/180 (6%)

Query: 115  QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HTL +S   S V++ G    G LG G  T +  S  +I+      + +V+   
Sbjct: 4183 QVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGNSTAKS-SPQKIDVLCGIGIKKVACGT 4241

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + +  L GV  + V  G   T 
Sbjct: 4242 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQIPVLAGVIIEDVAVGAEHTL 4297

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L   G V+  GSN+ GQLG G T     P  +  L+   +V QI+AG  +  A T   V
Sbjct: 4298 ALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQG-KNVRQISAGRCHSAAWTAPPV 4356


>gi|114657534|ref|XP_001174017.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 1
           [Pan troglodytes]
 gi|410226250|gb|JAA10344.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
           RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410226252|gb|JAA10345.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
           RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410263976|gb|JAA19954.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
           RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410293838|gb|JAA25519.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
           RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410293840|gb|JAA25520.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
           RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410336799|gb|JAA37346.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
           RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
          Length = 4861

 Score =  100 bits (250), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 73/235 (31%), Positives = 124/235 (52%), Gaps = 13/235 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           V+SFG G N  LGHG+ +   +P+ I+    +G+ + +V AG +  +AL S+G V
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEAL--QGMFIRKVCAGSQSSLALTSTGQV 635



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 75/237 (31%), Positives = 124/237 (52%), Gaps = 14/237 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4089

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4090 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4148

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4149 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSVDG 4205

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             +V++FG G    LG G    +  P+ I      GI + +V+ G +  VAL   G+V
Sbjct: 4206 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL--CGIGIKKVACGTQFSVALTKDGHV 4260



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 71/225 (31%), Positives = 111/225 (49%), Gaps = 7/225 (3%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 4093 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTS 4151

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHT 239
             G++FT G+      G  +T+     P  V AL+G    QV  GLN T  +++ G  V  
Sbjct: 4152 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSVDGSMVWA 4210

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ I  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 4211 FGDGDYGKLGLGNSTAKSSPQKIDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 4269

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             L  G   +  +P+ I      G+ +  V+ G EH +AL S+G V
Sbjct: 4270 GLPEGRARNHNRPQQIPVL--AGVIIEDVAVGAEHTLALASNGDV 4312



 Score = 84.7 bits (208), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 80/222 (36%), Positives = 113/222 (50%), Gaps = 15/222 (6%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 298 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             CLG G  +   L+P+ I+        +V VS GD H +AL
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLAL 680



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 110/234 (47%), Gaps = 38/234 (16%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS----AAHVVQVSASENHA 175
           R+   +  +  +++ G    G LGHG   ++       N P+     ++V +VS   +H 
Sbjct: 521 RHSAAVTEDGELYTWGEGDFGRLGHGDSNSR-------NIPTLVKDISNVGEVSCGSSHT 573

Query: 176 AFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             + + G+    F  GDN     GH DTNR +++P+++EAL+G+  ++V AG   +  LT
Sbjct: 574 IALSKDGRTVWSFGGGDNGKL--GHGDTNR-VYKPKVIEALQGMFIRKVCAGSQSSLALT 630

Query: 233 IRGHVHT--------CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             G V+         CGS+    L          PK I  L     +V ++ G S+ LA+
Sbjct: 631 STGQVYAWGCGACLGCGSSEATAL---------RPKLIEELAAT-RIVDVSIGDSHCLAL 680

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           + +  VY++G+ S    G G     + +P+ +      GI + ++SAG  H +A
Sbjct: 681 SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGL--DGIAIQQISAGTSHSLA 732



 Score = 64.3 bits (155), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 13/229 (5%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ ++ S+  +F+ G+   G LG G  + + +   R+       + QV+   
Sbjct: 4137 VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 4195

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G +   F  GD      G+         P+ ++ L G+  K+V  G  F+ 
Sbjct: 4196 NHTLAVSVDGSMVWAFGDGDYGKLGLGNSTAKS---SPQKIDVLCGIGIKKVACGTQFSV 4252

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNG 288
             LT  GHV+T G +    L  G   +   P+ I  L   G +++ +A G  + LA+  NG
Sbjct: 4253 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVL--AGVIIEDVAVGAEHTLALASNG 4310

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             VY++GS S   LG G  +   +P  +     +G +V ++SAG  H  A
Sbjct: 4311 DVYAWGSNSEGQLGLGHTNHVREPTLVTGL--QGKNVRQISAGRCHSAA 4357



 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 84/189 (44%), Gaps = 14/189 (7%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSG 342
           H +AL   G
Sbjct: 572 HTIALSKDG 580



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 84/175 (48%), Gaps = 7/175 (4%)

Query: 115 QITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++ G  HT+ +S    +V+S G    G LGHG +T +      I       + +V A  
Sbjct: 565 EVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEALQGMFIRKVCAGS 623

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             +  +  +GQV+  G  +   CG  +      RP+L+E L       V+ G +    L+
Sbjct: 624 QSSLALTSTGQVYAWGCGACLGCGSSEAT--ALRPKLIEELAATRIVDVSIGDSHCLALS 681

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
               V+  G+N+ GQ G G++    T PK ++ L+ + ++ QI+AG S+ LA T 
Sbjct: 682 HDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI-AIQQISAGTSHSLAWTA 735



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 65/128 (50%), Gaps = 4/128 (3%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 4030 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4089

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H  
Sbjct: 4090 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 4147

Query: 337  ALDSSGYV 344
             + S G +
Sbjct: 4148 VVTSDGKL 4155



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 53/180 (29%), Positives = 79/180 (43%), Gaps = 11/180 (6%)

Query: 115  QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HTL +S   S V++ G    G LG G  T +  S  +I+      + +V+   
Sbjct: 4190 QVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGNSTAKS-SPQKIDVLCGIGIKKVACGT 4248

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + +  L GV  + V  G   T 
Sbjct: 4249 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQIPVLAGVIIEDVAVGAEHTL 4304

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L   G V+  GSN+ GQLG G T     P  +  L+   +V QI+AG  +  A T   V
Sbjct: 4305 ALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQG-KNVRQISAGRCHSAAWTAPPV 4363


>gi|444730943|gb|ELW71312.1| putative E3 ubiquitin-protein ligase HERC1 [Tupaia chinensis]
          Length = 4409

 Score =  100 bits (250), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 73/235 (31%), Positives = 124/235 (52%), Gaps = 13/235 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 406 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 464

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 465 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 523

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 524 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 580

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           V+SFG G N  LGHG+ +   +P+ I+    +G+ + +V AG +  +AL S+G V
Sbjct: 581 VWSFGGGDNGKLGHGDTNRVYKPKVIEAL--QGMFIRKVCAGSQSSLALTSTGQV 633



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/235 (29%), Positives = 118/235 (50%), Gaps = 21/235 (8%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 3569 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 3627

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 3628 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 3686

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
            +T  G + T G+  +G+LG G+T ++  P+            ++A G ++ LAV+ +G +
Sbjct: 3687 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPE------------RVACGLNHTLAVSADGSM 3734

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+V
Sbjct: 3735 VWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHV 3787



 Score = 84.3 bits (207), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 79/222 (35%), Positives = 113/222 (50%), Gaps = 15/222 (6%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 467 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 525

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 526 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 581

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 582 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 640

Query: 298 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             CLG G  +   L+P+ I+        +V +S GD H +AL
Sbjct: 641 --CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLAL 678



 Score = 67.8 bits (164), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 110/234 (47%), Gaps = 38/234 (16%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS----AAHVVQVSASENHA 175
           R+   +  +  +++ G    G LGHG   ++       N P+     ++V +VS   +H 
Sbjct: 519 RHSAAVTEDGELYTWGEGDFGRLGHGDSNSR-------NIPTLVKDISNVGEVSCGSSHT 571

Query: 176 AFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             + + G+    F  GDN     GH DTNR +++P+++EAL+G+  ++V AG   +  LT
Sbjct: 572 IALSKDGRTVWSFGGGDNGKL--GHGDTNR-VYKPKVIEALQGMFIRKVCAGSQSSLALT 628

Query: 233 IRGHVHT--------CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             G V+         CGS+    L          PK I  L     +V I+ G S+ LA+
Sbjct: 629 STGQVYAWGCGACLGCGSSEATAL---------RPKLIEELAAT-RIVDISIGDSHCLAL 678

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           + +  VY++G+ S    G G     + +P+ +      GI + ++SAG  H +A
Sbjct: 679 SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGL--DGIAIQQISAGTSHSLA 730



 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 71/259 (27%), Positives = 107/259 (41%), Gaps = 48/259 (18%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 3631 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTS 3689

Query: 181  SGQVFTCGD---------NSS-------FCCGHRDT------------------------ 200
             G++FT G+         N+S         CG   T                        
Sbjct: 3690 DGKLFTFGNGDYGRLGLGNTSNKKLPERVACGLNHTLAVSADGSMVWAFGDGDYGKLGLG 3749

Query: 201  -NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP 259
             +     P+ V+ L G+  K+V  G  F+  LT  GHV+T G +    L  G   +   P
Sbjct: 3750 NSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP 3809

Query: 260  KSIAPLEEVGSVVQ-IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 318
            + +  L   G V++ +A G  + LA+   G VY++GS S   LG G  +   +P  +   
Sbjct: 3810 QQVPVL--AGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVL 3867

Query: 319  RRKGIHVVRVSAGDEHVVA 337
              +G +V ++SAG  H  A
Sbjct: 3868 --QGKNVRQISAGRCHSAA 3884



 Score = 60.8 bits (146), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 84/189 (44%), Gaps = 14/189 (7%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 398 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 455

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 456 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 513

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 514 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 569

Query: 334 HVVALDSSG 342
           H +AL   G
Sbjct: 570 HTIALSKDG 578



 Score = 58.5 bits (140), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 84/175 (48%), Gaps = 7/175 (4%)

Query: 115 QITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++ G  HT+ +S    +V+S G    G LGHG +T +      I       + +V A  
Sbjct: 563 EVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEALQGMFIRKVCAGS 621

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             +  +  +GQV+  G  +   CG  +      RP+L+E L       ++ G +    L+
Sbjct: 622 QSSLALTSTGQVYAWGCGACLGCGSSEAT--ALRPKLIEELAATRIVDISIGDSHCLALS 679

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
               V+  G+N+ GQ G G++    T PK ++ L+ + ++ QI+AG S+ LA T 
Sbjct: 680 HDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI-AIQQISAGTSHSLAWTA 733



 Score = 57.8 bits (138), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 65/128 (50%), Gaps = 4/128 (3%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 3568 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 3627

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H  
Sbjct: 3628 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 3685

Query: 337  ALDSSGYV 344
             + S G +
Sbjct: 3686 VVTSDGKL 3693



 Score = 47.0 bits (110), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 79/180 (43%), Gaps = 11/180 (6%)

Query: 115  QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            ++  G  HTL +S   S V++ G    G LG G  T +  S  +++      + +V+   
Sbjct: 3717 RVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKVDVLCGIGIKKVACGT 3775

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + V  L GV  + V  G   T 
Sbjct: 3776 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQVPVLAGVVIEDVAVGAEHTL 3831

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L   G V+  GSN+ GQLG G T     P  +  L+   +V QI+AG  +  A T   V
Sbjct: 3832 ALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQG-KNVRQISAGRCHSAAWTAPPV 3890


>gi|440907021|gb|ELR57214.1| Putative E3 ubiquitin-protein ligase HERC1, partial [Bos grunniens
           mutus]
          Length = 4874

 Score =  100 bits (250), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 73/235 (31%), Positives = 124/235 (52%), Gaps = 13/235 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 406 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 464

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 465 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 523

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 524 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 580

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           V+SFG G N  LGHG+ +   +P+ I+    +G+ + +V AG +  +AL S+G V
Sbjct: 581 VWSFGGGDNGKLGHGDTNRVYKPKVIEAL--QGMFIRKVCAGSQSSLALTSTGQV 633



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 74/244 (30%), Positives = 125/244 (51%), Gaps = 18/244 (7%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4033 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4091

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4092 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4150

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSV-------VQIAAGPSYM 281
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G         +Q+A G ++ 
Sbjct: 4151 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQARNNTLFFLQVACGLNHT 4210

Query: 282  LAVTGNG-VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            LAV+ +G +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL  
Sbjct: 4211 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTK 4268

Query: 341  SGYV 344
             G+V
Sbjct: 4269 DGHV 4272



 Score = 84.3 bits (207), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 79/222 (35%), Positives = 113/222 (50%), Gaps = 15/222 (6%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 467 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 525

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 526 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 581

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 582 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 640

Query: 298 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             CLG G  +   L+P+ I+        +V +S GD H +AL
Sbjct: 641 --CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLAL 678



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 70/235 (29%), Positives = 110/235 (46%), Gaps = 17/235 (7%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 4095 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTS 4153

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ----------VTAGLNFTGF 230
             G++FT G+      G  +T+     P  V AL+G    Q          V  GLN T  
Sbjct: 4154 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQARNNTLFFLQVACGLNHTLA 4212

Query: 231  LTIRGH-VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
            ++  G  V   G   +G+LG G++  + +P+ +  L  +G + ++A G  + +A+T +G 
Sbjct: 4213 VSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVALTKDGH 4271

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            VY+FG      L  G   +  +P+ I      G+ +  V+ G EH +AL S+G V
Sbjct: 4272 VYTFGQDRLIGLPEGRARNHNRPQQIPVL--AGVVIEDVAVGAEHTLALASTGDV 4324



 Score = 67.8 bits (164), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 110/234 (47%), Gaps = 38/234 (16%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS----AAHVVQVSASENHA 175
           R+   +  +  +++ G    G LGHG   ++       N P+     ++V +VS   +H 
Sbjct: 519 RHSAAVTEDGELYTWGEGDFGRLGHGDSNSR-------NIPTLVKDISNVGEVSCGSSHT 571

Query: 176 AFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             + + G+    F  GDN     GH DTNR +++P+++EAL+G+  ++V AG   +  LT
Sbjct: 572 IALSKDGRTVWSFGGGDNGKL--GHGDTNR-VYKPKVIEALQGMFIRKVCAGSQSSLALT 628

Query: 233 IRGHVHT--------CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             G V+         CGS+    L          PK I  L     +V I+ G S+ LA+
Sbjct: 629 STGQVYAWGCGACLGCGSSEATAL---------RPKLIEELAAT-RIVDISIGDSHCLAL 678

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           + +  VY++G+ S    G G     + +P+ +      GI + ++SAG  H +A
Sbjct: 679 SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGL--DGIAIQQISAGTSHSLA 730



 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 72/254 (28%), Positives = 108/254 (42%), Gaps = 20/254 (7%)

Query: 96  FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSF 154
           F +    +SD   T A    I TG   T ++S +  V+  GS+    L  G   TQ    
Sbjct: 338 FEEVCRMASDYSRTCASPDSIQTG--DTPIVSETCEVYVWGSNSSHQLVEG---TQEKIL 392

Query: 155 TRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPR 208
                PS +    + A +     +   G V  CG  S    G  D+N      +  F P 
Sbjct: 393 QPKLAPSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH 452

Query: 209 LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 268
              ++K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    + 
Sbjct: 453 --RSIKKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQG 508

Query: 269 GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 328
             VV ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  V
Sbjct: 509 KVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEV 564

Query: 329 SAGDEHVVALDSSG 342
           S G  H +AL   G
Sbjct: 565 SCGSSHTIALSKDG 578



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 106/238 (44%), Gaps = 21/238 (8%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFP--SAA 163
            +Q++ G  H+ ++ S+  +F+ G+   G LG G       PE    +   +I     +  
Sbjct: 4139 VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQARNNTL 4198

Query: 164  HVVQVSASENHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
              +QV+   NH   V   G +   F  GD      G+         P+ V+ L G+  K+
Sbjct: 4199 FFLQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS---SPQKVDVLCGIGIKK 4255

Query: 221  VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPS 279
            V  G  F+  LT  GHV+T G +    L  G   +   P+ I  L   G V++ +A G  
Sbjct: 4256 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVL--AGVVIEDVAVGAE 4313

Query: 280  YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            + LA+   G VY++GS S   LG G  +   +P  +     +G +V ++SAG  H  A
Sbjct: 4314 HTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVL--QGKNVRQISAGRCHSAA 4369



 Score = 58.5 bits (140), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 84/175 (48%), Gaps = 7/175 (4%)

Query: 115 QITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++ G  HT+ +S    +V+S G    G LGHG +T +      I       + +V A  
Sbjct: 563 EVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEALQGMFIRKVCAGS 621

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             +  +  +GQV+  G  +   CG  +      RP+L+E L       ++ G +    L+
Sbjct: 622 QSSLALTSTGQVYAWGCGACLGCGSSEAT--ALRPKLIEELAATRIVDISIGDSHCLALS 679

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
               V+  G+N+ GQ G G++    T PK ++ L+ + ++ QI+AG S+ LA T 
Sbjct: 680 HDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI-AIQQISAGTSHSLAWTA 733



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 65/128 (50%), Gaps = 4/128 (3%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 4032 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4091

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H  
Sbjct: 4092 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 4149

Query: 337  ALDSSGYV 344
             + S G +
Sbjct: 4150 VVTSDGKL 4157



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 80/181 (44%), Gaps = 11/181 (6%)

Query: 114  MQITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS 171
            +Q+  G  HTL +S   S V++ G    G LG G  T +  S  +++      + +V+  
Sbjct: 4201 LQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKVDVLCGIGIKKVACG 4259

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
               +  + + G V+T G +          R+ NRP    + +  L GV  + V  G   T
Sbjct: 4260 TQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQIPVLAGVVIEDVAVGAEHT 4315

Query: 229  GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
              L   G V+  GSN+ GQLG G T     P  +  L+   +V QI+AG  +  A T   
Sbjct: 4316 LALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQG-KNVRQISAGRCHSAAWTAPP 4374

Query: 289  V 289
            V
Sbjct: 4375 V 4375


>gi|383422561|gb|AFH34494.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
          Length = 4853

 Score =  100 bits (250), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 73/235 (31%), Positives = 124/235 (52%), Gaps = 13/235 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           V+SFG G N  LGHG+ +   +P+ I+    +G+ + +V AG +  +AL S+G V
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEAL--QGMFIRKVCAGSQSSLALTSTGQV 635



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 75/237 (31%), Positives = 124/237 (52%), Gaps = 14/237 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4023 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4081

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4082 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4140

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4141 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4197

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             +V++FG G    LG G    +  P+ I      GI + +V+ G +  VAL   G+V
Sbjct: 4198 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL--CGIGIKKVACGTQFSVALTKDGHV 4252



 Score = 84.7 bits (208), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 71/225 (31%), Positives = 110/225 (48%), Gaps = 7/225 (3%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 4085 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTS 4143

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHT 239
             G++FT G+      G  +T+     P  V AL+G    QV  GLN T  ++  G  V  
Sbjct: 4144 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 4202

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ I  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 4203 FGDGDYGKLGLGNSTAKSSPQKIDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 4261

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             L  G   +  +P+ I      G+ +  V+ G EH +AL S+G V
Sbjct: 4262 GLPEGRARNHNRPQQIPVL--AGMIIEDVAVGAEHTLALASNGDV 4304



 Score = 84.7 bits (208), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 80/222 (36%), Positives = 113/222 (50%), Gaps = 15/222 (6%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 298 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             CLG G  +   L+P+ I+        +V VS GD H +AL
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLAL 680



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 110/234 (47%), Gaps = 38/234 (16%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS----AAHVVQVSASENHA 175
           R+   +  +  +++ G    G LGHG   ++       N P+     ++V +VS   +H 
Sbjct: 521 RHSAAVTEDGELYTWGEGDFGRLGHGDSNSR-------NIPTLVKDISNVGEVSCGSSHT 573

Query: 176 AFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             + + G+    F  GDN     GH DTNR +++P+++EAL+G+  ++V AG   +  LT
Sbjct: 574 IALSKDGRTVWSFGGGDNGKL--GHGDTNR-VYKPKVIEALQGMFIRKVCAGSQSSLALT 630

Query: 233 IRGHVHT--------CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             G V+         CGS+    L          PK I  L     +V ++ G S+ LA+
Sbjct: 631 STGQVYAWGCGACLGCGSSEATAL---------RPKLIEELAAT-RIVDVSIGDSHCLAL 680

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           + +  VY++G+ S    G G     + +P+ +      GI + ++SAG  H +A
Sbjct: 681 SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGL--DGIAIQQISAGTSHSLA 732



 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 13/229 (5%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ ++ S+  +F+ G+   G LG G  + + +   R+       + QV+   
Sbjct: 4129 VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 4187

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G +   F  GD      G+         P+ ++ L G+  K+V  G  F+ 
Sbjct: 4188 NHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS---SPQKIDVLCGIGIKKVACGTQFSV 4244

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNG 288
             LT  GHV+T G +    L  G   +   P+ I  L   G +++ +A G  + LA+  NG
Sbjct: 4245 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVL--AGMIIEDVAVGAEHTLALASNG 4302

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             VY++GS S   LG G  +   +P  +     +G +V ++SAG  H  A
Sbjct: 4303 DVYAWGSNSEGQLGLGHTNHVREPTLVTGL--QGKNVRQISAGRCHSAA 4349



 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 84/189 (44%), Gaps = 14/189 (7%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSG 342
           H +AL   G
Sbjct: 572 HTIALSKDG 580



 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 84/175 (48%), Gaps = 7/175 (4%)

Query: 115 QITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++ G  HT+ +S    +V+S G    G LGHG +T +      I       + +V A  
Sbjct: 565 EVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEALQGMFIRKVCAGS 623

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             +  +  +GQV+  G  +   CG  +      RP+L+E L       V+ G +    L+
Sbjct: 624 QSSLALTSTGQVYAWGCGACLGCGSSEAT--ALRPKLIEELAATRIVDVSIGDSHCLALS 681

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
               V+  G+N+ GQ G G++    T PK ++ L+ + ++ QI+AG S+ LA T 
Sbjct: 682 HDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI-AIQQISAGTSHSLAWTA 735



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 65/128 (50%), Gaps = 4/128 (3%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 4022 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4081

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H  
Sbjct: 4082 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 4139

Query: 337  ALDSSGYV 344
             + S G +
Sbjct: 4140 VVTSDGKL 4147



 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 92/218 (42%), Gaps = 14/218 (6%)

Query: 115  QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HTL +S   S V++ G    G LG G  T +  S  +I+      + +V+   
Sbjct: 4182 QVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKIDVLCGIGIKKVACGT 4240

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + +  L G+  + V  G   T 
Sbjct: 4241 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQIPVLAGMIIEDVAVGAEHTL 4296

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L   G V+  GSN+ GQLG G T     P  +  L+   +V QI+AG  +  A T   V
Sbjct: 4297 ALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQG-KNVRQISAGRCHSAAWTAPPV 4355

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR 327
                  G +  L  G   D L P+     R   IH VR
Sbjct: 4356 P-PRAPGVSVPLQLG-LPDTLPPQ-YGALREVSIHTVR 4390


>gi|380817672|gb|AFE80710.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
          Length = 4854

 Score =  100 bits (250), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 73/235 (31%), Positives = 124/235 (52%), Gaps = 13/235 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           V+SFG G N  LGHG+ +   +P+ I+    +G+ + +V AG +  +AL S+G V
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEAL--QGMFIRKVCAGSQSSLALTSTGQV 635



 Score = 95.1 bits (235), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 75/237 (31%), Positives = 124/237 (52%), Gaps = 14/237 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4024 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4082

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4083 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4141

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4142 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4198

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             +V++FG G    LG G    +  P+ I      GI + +V+ G +  VAL   G+V
Sbjct: 4199 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL--CGIGIKKVACGTQFSVALTKDGHV 4253



 Score = 84.7 bits (208), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 71/225 (31%), Positives = 110/225 (48%), Gaps = 7/225 (3%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 4086 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTS 4144

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHT 239
             G++FT G+      G  +T+     P  V AL+G    QV  GLN T  ++  G  V  
Sbjct: 4145 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 4203

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ I  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 4204 FGDGDYGKLGLGNSTAKSSPQKIDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 4262

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             L  G   +  +P+ I      G+ +  V+ G EH +AL S+G V
Sbjct: 4263 GLPEGRARNHNRPQQIPVL--AGMIIEDVAVGAEHTLALASNGDV 4305



 Score = 84.7 bits (208), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 80/222 (36%), Positives = 113/222 (50%), Gaps = 15/222 (6%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 298 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             CLG G  +   L+P+ I+        +V VS GD H +AL
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLAL 680



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 110/234 (47%), Gaps = 38/234 (16%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS----AAHVVQVSASENHA 175
           R+   +  +  +++ G    G LGHG   ++       N P+     ++V +VS   +H 
Sbjct: 521 RHSAAVTEDGELYTWGEGDFGRLGHGDSNSR-------NIPTLVKDISNVGEVSCGSSHT 573

Query: 176 AFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             + + G+    F  GDN     GH DTNR +++P+++EAL+G+  ++V AG   +  LT
Sbjct: 574 IALSKDGRTVWSFGGGDNGKL--GHGDTNR-VYKPKVIEALQGMFIRKVCAGSQSSLALT 630

Query: 233 IRGHVHT--------CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             G V+         CGS+    L          PK I  L     +V ++ G S+ LA+
Sbjct: 631 STGQVYAWGCGACLGCGSSEATAL---------RPKLIEELAAT-RIVDVSIGDSHCLAL 680

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           + +  VY++G+ S    G G     + +P+ +      GI + ++SAG  H +A
Sbjct: 681 SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGL--DGIAIQQISAGTSHSLA 732



 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 13/229 (5%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ ++ S+  +F+ G+   G LG G  + + +   R+       + QV+   
Sbjct: 4130 VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 4188

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G +   F  GD      G+         P+ ++ L G+  K+V  G  F+ 
Sbjct: 4189 NHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS---SPQKIDVLCGIGIKKVACGTQFSV 4245

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNG 288
             LT  GHV+T G +    L  G   +   P+ I  L   G +++ +A G  + LA+  NG
Sbjct: 4246 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVL--AGMIIEDVAVGAEHTLALASNG 4303

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             VY++GS S   LG G  +   +P  +     +G +V ++SAG  H  A
Sbjct: 4304 DVYAWGSNSEGQLGLGHTNHVREPTLVTGL--QGKNVRQISAGRCHSAA 4350



 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 84/189 (44%), Gaps = 14/189 (7%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSG 342
           H +AL   G
Sbjct: 572 HTIALSKDG 580



 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 84/175 (48%), Gaps = 7/175 (4%)

Query: 115 QITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++ G  HT+ +S    +V+S G    G LGHG +T +      I       + +V A  
Sbjct: 565 EVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEALQGMFIRKVCAGS 623

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             +  +  +GQV+  G  +   CG  +      RP+L+E L       V+ G +    L+
Sbjct: 624 QSSLALTSTGQVYAWGCGACLGCGSSEAT--ALRPKLIEELAATRIVDVSIGDSHCLALS 681

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
               V+  G+N+ GQ G G++    T PK ++ L+ + ++ QI+AG S+ LA T 
Sbjct: 682 HDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI-AIQQISAGTSHSLAWTA 735



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 65/128 (50%), Gaps = 4/128 (3%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 4023 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4082

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H  
Sbjct: 4083 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 4140

Query: 337  ALDSSGYV 344
             + S G +
Sbjct: 4141 VVTSDGKL 4148



 Score = 48.1 bits (113), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 92/218 (42%), Gaps = 14/218 (6%)

Query: 115  QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HTL +S   S V++ G    G LG G  T +  S  +I+      + +V+   
Sbjct: 4183 QVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKIDVLCGIGIKKVACGT 4241

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + +  L G+  + V  G   T 
Sbjct: 4242 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQIPVLAGMIIEDVAVGAEHTL 4297

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L   G V+  GSN+ GQLG G T     P  +  L+   +V QI+AG  +  A T   V
Sbjct: 4298 ALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQG-KNVRQISAGRCHSAAWTAPPV 4356

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR 327
                  G +  L  G   D L P+     R   IH VR
Sbjct: 4357 P-PRAPGVSVPLQLG-LPDTLPPQ-YGALREVSIHTVR 4391


>gi|334314433|ref|XP_003340037.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Monodelphis
           domestica]
          Length = 4790

 Score =  100 bits (250), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 73/235 (31%), Positives = 124/235 (52%), Gaps = 13/235 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           V+SFG G N  LGHG+ +   +P+ I+    +G+ + +V AG +  +AL S+G V
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEAL--QGMFIRKVCAGSQSSLALTSTGQV 635



 Score = 94.4 bits (233), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 124/237 (52%), Gaps = 14/237 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 3960 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4018

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4019 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVIQMSCGFKHSAV 4077

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4078 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4134

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+V
Sbjct: 4135 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHV 4189



 Score = 84.3 bits (207), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 79/222 (35%), Positives = 113/222 (50%), Gaps = 15/222 (6%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 298 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             CLG G  +   L+P+ I+        +V +S GD H +AL
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLAL 680



 Score = 84.0 bits (206), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 68/225 (30%), Positives = 110/225 (48%), Gaps = 7/225 (3%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       V+Q+S    H+A V  
Sbjct: 4022 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVIQMSCGFKHSAVVTS 4080

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHT 239
             G++FT G+      G  +T+     P  V AL+G    QV  GLN T  ++  G  V  
Sbjct: 4081 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 4139

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ +  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 4140 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 4198

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             L  G   +  +P+ I      G+ +  ++ G EH +AL S+G V
Sbjct: 4199 GLPEGRARNHNRPQQIPVL--AGVVIEDIAVGAEHTLALASTGDV 4241



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 110/234 (47%), Gaps = 38/234 (16%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS----AAHVVQVSASENHA 175
           R+   +  +  +++ G    G LGHG   ++       N P+     ++V +VS   +H 
Sbjct: 521 RHSAAVTEDGELYTWGEGDFGRLGHGDSNSR-------NIPTLVKDISNVGEVSCGSSHT 573

Query: 176 AFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             + + G+    F  GDN     GH DTNR +++P+++EAL+G+  ++V AG   +  LT
Sbjct: 574 IALSKDGRTVWSFGGGDNGKL--GHGDTNR-VYKPKVIEALQGMFIRKVCAGSQSSLALT 630

Query: 233 IRGHVHT--------CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             G V+         CGS+    L          PK I  L     +V I+ G S+ LA+
Sbjct: 631 STGQVYAWGCGACLGCGSSEATAL---------RPKLIEELAAT-RIVDISIGDSHCLAL 680

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           + +  VY++G+ S    G G     + +P+ +      G+ + ++SAG  H +A
Sbjct: 681 SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGL--DGVAIQQISAGTSHSLA 732



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 67/233 (28%), Positives = 106/233 (45%), Gaps = 13/233 (5%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ ++ S+  +F+ G+   G LG G  + + +   R+       + QV+   
Sbjct: 4066 IQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 4124

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G +   F  GD      G+         P+ V+ L G+  K+V  G  F+ 
Sbjct: 4125 NHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS---SPQKVDVLCGIGIKKVACGTQFSV 4181

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNG 288
             LT  GHV+T G +    L  G   +   P+ I  L   G V++ IA G  + LA+   G
Sbjct: 4182 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVL--AGVVIEDIAVGAEHTLALASTG 4239

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
             VY++GS S   LG G  +   +P  I   + K I   ++SAG  H  A  +S
Sbjct: 4240 DVYAWGSNSEGQLGLGHTNHVREPTLITILQGKNIR--QISAGRCHSAAWTAS 4290



 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 84/189 (44%), Gaps = 14/189 (7%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSG 342
           H +AL   G
Sbjct: 572 HTIALSKDG 580



 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 84/175 (48%), Gaps = 7/175 (4%)

Query: 115 QITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++ G  HT+ +S    +V+S G    G LGHG +T +      I       + +V A  
Sbjct: 565 EVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEALQGMFIRKVCAGS 623

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             +  +  +GQV+  G  +   CG  +      RP+L+E L       ++ G +    L+
Sbjct: 624 QSSLALTSTGQVYAWGCGACLGCGSSEAT--ALRPKLIEELAATRIVDISIGDSHCLALS 681

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
               V+  G+N+ GQ G G++    T PK ++ L+ V ++ QI+AG S+ LA T 
Sbjct: 682 HDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGV-AIQQISAGTSHSLAWTA 735



 Score = 57.8 bits (138), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 65/128 (50%), Gaps = 4/128 (3%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 3959 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4018

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  V+++S G +H  
Sbjct: 4019 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVIQMSCGFKHSA 4076

Query: 337  ALDSSGYV 344
             + S G +
Sbjct: 4077 VVTSDGKL 4084



 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 80/180 (44%), Gaps = 11/180 (6%)

Query: 115  QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HTL +S   S V++ G    G LG G  T +  S  +++      + +V+   
Sbjct: 4119 QVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKVDVLCGIGIKKVACGT 4177

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + +  L GV  + +  G   T 
Sbjct: 4178 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQIPVLAGVVIEDIAVGAEHTL 4233

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L   G V+  GSN+ GQLG G T     P  I  L+   ++ QI+AG  +  A T + V
Sbjct: 4234 ALASTGDVYAWGSNSEGQLGLGHTNHVREPTLITILQG-KNIRQISAGRCHSAAWTASPV 4292


>gi|332235891|ref|XP_003267138.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC1 [Nomascus leucogenys]
          Length = 4855

 Score =  100 bits (250), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 73/235 (31%), Positives = 124/235 (52%), Gaps = 13/235 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           V+SFG G N  LGHG+ +   +P+ I+    +G+ + +V AG +  +AL S+G V
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEAL--QGMFIRKVCAGSQSSLALTSTGQV 635



 Score = 84.7 bits (208), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 80/222 (36%), Positives = 113/222 (50%), Gaps = 15/222 (6%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 298 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             CLG G  +   L+P+ I+        +V VS GD H +AL
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLAL 680



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 71/226 (31%), Positives = 110/226 (48%), Gaps = 14/226 (6%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSASENHAAFVL 179
            H++ ++ S  VFS G    G LGHG       +  R   P     VVQ+S    H+A V 
Sbjct: 4092 HSMALTESGEVFSWGDGDYGKLGHG-------NSDRQRRPXQGEEVVQMSCGFKHSAVVT 4144

Query: 180  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VH 238
              G++FT G+      G  +T+     P  V AL+G    QV  GLN T  ++  G  V 
Sbjct: 4145 SDGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVW 4203

Query: 239  TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
              G   +G+LG G++  + +P+ I  L  +G + ++A G  + +A+T +G VY+FG    
Sbjct: 4204 AFGDGDYGKLGLGNSTAKSSPQKIDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRL 4262

Query: 299  FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              L  G   +  +P+ I      G+ +  V+ G EH +AL S+G V
Sbjct: 4263 IGLPEGRARNHNRPQQIPVL--AGVIIEDVAVGAEHTLALASNGDV 4306



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 71/237 (29%), Positives = 119/237 (50%), Gaps = 19/237 (8%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4030 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4088

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RP      +G    Q++ G   +  
Sbjct: 4089 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPX-----QGEEVVQMSCGFKHSAV 4142

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4143 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4199

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             +V++FG G    LG G    +  P+ I      GI + +V+ G +  VAL   G+V
Sbjct: 4200 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL--CGIGIKKVACGTQFSVALTKDGHV 4254



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 110/234 (47%), Gaps = 38/234 (16%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS----AAHVVQVSASENHA 175
           R+   +  +  +++ G    G LGHG   ++       N P+     ++V +VS   +H 
Sbjct: 521 RHSAAVTEDGELYTWGEGDFGRLGHGDSNSR-------NIPTLVKDISNVGEVSCGSSHT 573

Query: 176 AFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             + + G+    F  GDN     GH DTNR +++P+++EAL+G+  ++V AG   +  LT
Sbjct: 574 IALSKDGRTVWSFGGGDNGKL--GHGDTNR-VYKPKVIEALQGMFIRKVCAGSQSSLALT 630

Query: 233 IRGHVHT--------CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             G V+         CGS+    L          PK I  L     +V ++ G S+ LA+
Sbjct: 631 STGQVYAWGCGACLGCGSSEATAL---------RPKLIEELAAT-RIVDVSIGDSHCLAL 680

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           + +  VY++G+ S    G G     + +P+ +      GI + ++SAG  H +A
Sbjct: 681 SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGL--DGIAIQQISAGTSHSLA 732



 Score = 64.7 bits (156), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 13/229 (5%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ ++ S+  +F+ G+   G LG G  + + +   R+       + QV+   
Sbjct: 4131 VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 4189

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G +   F  GD      G+         P+ ++ L G+  K+V  G  F+ 
Sbjct: 4190 NHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS---SPQKIDVLCGIGIKKVACGTQFSV 4246

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNG 288
             LT  GHV+T G +    L  G   +   P+ I  L   G +++ +A G  + LA+  NG
Sbjct: 4247 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVL--AGVIIEDVAVGAEHTLALASNG 4304

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             VY++GS S   LG G  +   +P  +     +G +V ++SAG  H  A
Sbjct: 4305 DVYAWGSNSEGQLGLGHTNHVREPTLVTGL--QGKNVRQISAGRCHSAA 4351



 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 84/189 (44%), Gaps = 14/189 (7%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSG 342
           H +AL   G
Sbjct: 572 HTIALSKDG 580



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 84/175 (48%), Gaps = 7/175 (4%)

Query: 115 QITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++ G  HT+ +S    +V+S G    G LGHG +T +      I       + +V A  
Sbjct: 565 EVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEALQGMFIRKVCAGS 623

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             +  +  +GQV+  G  +   CG  +      RP+L+E L       V+ G +    L+
Sbjct: 624 QSSLALTSTGQVYAWGCGACLGCGSSEAT--ALRPKLIEELAATRIVDVSIGDSHCLALS 681

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
               V+  G+N+ GQ G G++    T PK ++ L+ + ++ QI+AG S+ LA T 
Sbjct: 682 HDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI-AIQQISAGTSHSLAWTA 735



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 62/128 (48%), Gaps = 9/128 (7%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 4029 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4088

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +P        +G  VV++S G +H  
Sbjct: 4089 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRP-------XQGEEVVQMSCGFKHSA 4141

Query: 337  ALDSSGYV 344
             + S G +
Sbjct: 4142 VVTSDGKL 4149



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 53/180 (29%), Positives = 79/180 (43%), Gaps = 11/180 (6%)

Query: 115  QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HTL +S   S V++ G    G LG G  T +  S  +I+      + +V+   
Sbjct: 4184 QVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKIDVLCGIGIKKVACGT 4242

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + +  L GV  + V  G   T 
Sbjct: 4243 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQIPVLAGVIIEDVAVGAEHTL 4298

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L   G V+  GSN+ GQLG G T     P  +  L+   +V QI+AG  +  A T   V
Sbjct: 4299 ALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQG-KNVRQISAGRCHSAAWTAPPV 4357


>gi|383422563|gb|AFH34495.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
          Length = 4846

 Score =  100 bits (250), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 73/235 (31%), Positives = 124/235 (52%), Gaps = 13/235 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           V+SFG G N  LGHG+ +   +P+ I+    +G+ + +V AG +  +AL S+G V
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEAL--QGMFIRKVCAGSQSSLALTSTGQV 635



 Score = 95.1 bits (235), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 75/237 (31%), Positives = 124/237 (52%), Gaps = 14/237 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4016 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4074

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4075 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4133

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4134 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4190

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             +V++FG G    LG G    +  P+ I      GI + +V+ G +  VAL   G+V
Sbjct: 4191 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL--CGIGIKKVACGTQFSVALTKDGHV 4245



 Score = 84.7 bits (208), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 71/225 (31%), Positives = 110/225 (48%), Gaps = 7/225 (3%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 4078 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTS 4136

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHT 239
             G++FT G+      G  +T+     P  V AL+G    QV  GLN T  ++  G  V  
Sbjct: 4137 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 4195

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ I  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 4196 FGDGDYGKLGLGNSTAKSSPQKIDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 4254

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             L  G   +  +P+ I      G+ +  V+ G EH +AL S+G V
Sbjct: 4255 GLPEGRARNHNRPQQIPVL--AGMIIEDVAVGAEHTLALASNGDV 4297



 Score = 84.7 bits (208), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 80/222 (36%), Positives = 113/222 (50%), Gaps = 15/222 (6%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 298 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             CLG G  +   L+P+ I+        +V VS GD H +AL
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLAL 680



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 110/234 (47%), Gaps = 38/234 (16%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS----AAHVVQVSASENHA 175
           R+   +  +  +++ G    G LGHG   ++       N P+     ++V +VS   +H 
Sbjct: 521 RHSAAVTEDGELYTWGEGDFGRLGHGDSNSR-------NIPTLVKDISNVGEVSCGSSHT 573

Query: 176 AFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             + + G+    F  GDN     GH DTNR +++P+++EAL+G+  ++V AG   +  LT
Sbjct: 574 IALSKDGRTVWSFGGGDNGKL--GHGDTNR-VYKPKVIEALQGMFIRKVCAGSQSSLALT 630

Query: 233 IRGHVHT--------CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             G V+         CGS+    L          PK I  L     +V ++ G S+ LA+
Sbjct: 631 STGQVYAWGCGACLGCGSSEATAL---------RPKLIEELAAT-RIVDVSIGDSHCLAL 680

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           + +  VY++G+ S    G G     + +P+ +      GI + ++SAG  H +A
Sbjct: 681 SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGL--DGIAIQQISAGTSHSLA 732



 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 13/229 (5%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ ++ S+  +F+ G+   G LG G  + + +   R+       + QV+   
Sbjct: 4122 VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 4180

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G +   F  GD      G+         P+ ++ L G+  K+V  G  F+ 
Sbjct: 4181 NHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS---SPQKIDVLCGIGIKKVACGTQFSV 4237

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNG 288
             LT  GHV+T G +    L  G   +   P+ I  L   G +++ +A G  + LA+  NG
Sbjct: 4238 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVL--AGMIIEDVAVGAEHTLALASNG 4295

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             VY++GS S   LG G  +   +P  +     +G +V ++SAG  H  A
Sbjct: 4296 DVYAWGSNSEGQLGLGHTNHVREPTLVTGL--QGKNVRQISAGRCHSAA 4342



 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 84/189 (44%), Gaps = 14/189 (7%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSG 342
           H +AL   G
Sbjct: 572 HTIALSKDG 580



 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 84/175 (48%), Gaps = 7/175 (4%)

Query: 115 QITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++ G  HT+ +S    +V+S G    G LGHG +T +      I       + +V A  
Sbjct: 565 EVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEALQGMFIRKVCAGS 623

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             +  +  +GQV+  G  +   CG  +      RP+L+E L       V+ G +    L+
Sbjct: 624 QSSLALTSTGQVYAWGCGACLGCGSSEAT--ALRPKLIEELAATRIVDVSIGDSHCLALS 681

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
               V+  G+N+ GQ G G++    T PK ++ L+ + ++ QI+AG S+ LA T 
Sbjct: 682 HDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI-AIQQISAGTSHSLAWTA 735



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 65/128 (50%), Gaps = 4/128 (3%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 4015 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4074

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H  
Sbjct: 4075 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 4132

Query: 337  ALDSSGYV 344
             + S G +
Sbjct: 4133 VVTSDGKL 4140



 Score = 48.1 bits (113), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 92/218 (42%), Gaps = 14/218 (6%)

Query: 115  QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HTL +S   S V++ G    G LG G  T +  S  +I+      + +V+   
Sbjct: 4175 QVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKIDVLCGIGIKKVACGT 4233

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + +  L G+  + V  G   T 
Sbjct: 4234 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQIPVLAGMIIEDVAVGAEHTL 4289

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L   G V+  GSN+ GQLG G T     P  +  L+   +V QI+AG  +  A T   V
Sbjct: 4290 ALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQG-KNVRQISAGRCHSAAWTAPPV 4348

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR 327
                  G +  L  G   D L P+     R   IH VR
Sbjct: 4349 P-PRAPGVSVPLQLG-LPDTLPPQ-YGALREVSIHTVR 4383


>gi|323451188|gb|EGB07066.1| hypothetical protein AURANDRAFT_71888 [Aureococcus anophagefferens]
          Length = 1060

 Score =  100 bits (250), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 75/215 (34%), Positives = 110/215 (51%), Gaps = 11/215 (5%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSF-TRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 189
           V++CG +  G LG G   ++ V +  R +      V  V+   +++  V+ +GQV +CG 
Sbjct: 34  VYACGYNATGQLGCGDRESRVVPWRVRTSRLGKGRVDGVACGSSYSVVVV-AGQVASCGK 92

Query: 190 NSSFCCGH--RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           N     GH  RD       PR+VE L+GV    V A    T  L  RG V++ G    GQ
Sbjct: 93  NVHGQLGHGGRDEET---APRVVEGLRGVRVVAVAARGAHTLALDDRGRVYSWGRGDEGQ 149

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 307
           LGHG     P P+ IA L    SVV + AG ++ LA+  +G VYS+G G +  LGHG++ 
Sbjct: 150 LGHGAFEAVPHPRRIARLPT--SVVAVGAGRTHSLALDADGAVYSWGCGDDGALGHGDRR 207

Query: 308 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            +L PRA++ F+ +      VS G  H   + + G
Sbjct: 208 RQLAPRAVEFFKTR--PAAAVSCGSRHNAVVTADG 240



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/109 (38%), Positives = 54/109 (49%), Gaps = 4/109 (3%)

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLE-EVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
           V+ CG N  GQLG GD   R  P  +       G V  +A G SY + V   G V S G 
Sbjct: 34  VYACGYNATGQLGCGDRESRVVPWRVRTSRLGKGRVDGVACGSSYSVVVVA-GQVASCGK 92

Query: 296 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             +  LGHG + +E  PR ++  R  G+ VV V+A   H +ALD  G V
Sbjct: 93  NVHGQLGHGGRDEETAPRVVEGLR--GVRVVAVAARGAHTLALDDRGRV 139



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 50/221 (22%), Positives = 87/221 (39%), Gaps = 4/221 (1%)

Query: 116 ITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHA 175
           +  G  +++++    V SCG ++ G LGHG    +      +       VV V+A   H 
Sbjct: 72  VACGSSYSVVVVAGQVASCGKNVHGQLGHGGRDEETAPRV-VEGLRGVRVVAVAARGAHT 130

Query: 176 AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 235
             +   G+V++ G       GH      +  PR +  L       V AG   +  L   G
Sbjct: 131 LALDDRGRVYSWGRGDEGQLGH-GAFEAVPHPRRIARLP-TSVVAVGAGRTHSLALDADG 188

Query: 236 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
            V++ G    G LGHGD   +  P+++    +      ++ G  +   VT +G + ++G 
Sbjct: 189 AVYSWGCGDDGALGHGDRRRQLAPRAVE-FFKTRPAAAVSCGSRHNAVVTADGALVTWGW 247

Query: 296 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
            +    G     D L+P  +      G   V  + G  H +
Sbjct: 248 AAYGQCGASAGGDGLRPAEVPLPGDGGAECVLAACGYRHTL 288



 Score = 43.5 bits (101), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 62/243 (25%), Positives = 91/243 (37%), Gaps = 23/243 (9%)

Query: 97  LQSVEHSSDIVETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
            ++V H   I       + +  GR H+L L ++ +V+S G    G LGHG    Q ++  
Sbjct: 155 FEAVPHPRRIARLPTSVVAVGAGRTHSLALDADGAVYSWGCGDDGALGHGDRRRQ-LAPR 213

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHR---DTNRPIFRPRLVEA 212
            + F        VS    H A V   G + T G  +   CG     D  RP   P  +  
Sbjct: 214 AVEFFKTRPAAAVSCGSRHNAVVTADGALVTWGWAAYGQCGASAGGDGLRPAEVP--LPG 271

Query: 213 LKGVPCKQVTAGLNFTGFLTIRGH---VHTCGSNTHGQLGHGDTLDRPTPKSIAPL---- 265
             G  C     G   T   T       +   G N +GQ G G T     P+ +       
Sbjct: 272 DGGAECVLAACGYRHTLCATRHASGDAIWAFGWNAYGQCG-GSTCSAAAPRRVGGKFLGS 330

Query: 266 EEVGS---VVQIAAGPSYMLAVT----GNGVVYSFGSGSNFCLGHGEQHD-ELQPRAIQT 317
           +E G    V  ++AG  + +       G    Y++G G +  LG G++ D    PR   T
Sbjct: 331 QEGGDGAVVEALSAGGRHSVCCVRLPGGGTATYAWGRGDDGQLGSGDRRDRRANPRVAAT 390

Query: 318 FRR 320
             R
Sbjct: 391 AAR 393


>gi|338717875|ref|XP_001918080.2| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC1-like [Equus caballus]
          Length = 4860

 Score =  100 bits (250), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 73/235 (31%), Positives = 124/235 (52%), Gaps = 13/235 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           V+SFG G N  LGHG+ +   +P+ I+    +G+ + +V AG +  +AL S+G V
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEAL--QGMFIRKVCAGSQSSLALTSTGQV 635



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 124/237 (52%), Gaps = 14/237 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4030 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4088

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4089 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4147

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4148 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSTDG 4204

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+V
Sbjct: 4205 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHV 4259



 Score = 84.7 bits (208), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 70/225 (31%), Positives = 110/225 (48%), Gaps = 7/225 (3%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 4092 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTS 4150

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHT 239
             G++FT G+      G  +T+     P  V AL+G    QV  GLN T  ++  G  V  
Sbjct: 4151 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSTDGSMVWA 4209

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ +  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 4210 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 4268

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             L  G   +  +P+ I      G+ +  V+ G EH +AL S+G V
Sbjct: 4269 GLPEGRARNHNRPQQIPVL--AGVVIEDVAVGAEHTLALASNGDV 4311



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 78/222 (35%), Positives = 113/222 (50%), Gaps = 15/222 (6%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 298 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             CLG G  +   L+P+ ++        +V +S GD H +AL
Sbjct: 643 --CLGCGSSEATALRPKLVEEL--AATRIVDISIGDSHCLAL 680



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 112/229 (48%), Gaps = 28/229 (12%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS----AAHVVQVSASENHA 175
           R+   +  +  +++ G    G LGHG   ++       N P+     ++V +VS   +H 
Sbjct: 521 RHSAAVTEDGELYTWGEGDFGRLGHGDSNSR-------NIPTLVKDISNVGEVSCGSSHT 573

Query: 176 AFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             + + G+    F  GDN     GH DTNR +++P+++EAL+G+  ++V AG   +  LT
Sbjct: 574 IALSKDGRTVWSFGGGDNGKL--GHGDTNR-VYKPKVIEALQGMFIRKVCAGSQSSLALT 630

Query: 233 IRGHVHTCGSNTHGQLGHGD-TLDRPTPKSIAPLEEVGS--VVQIAAGPSYMLAVTGNGV 289
             G V+  G       G  + T  RP       +EE+ +  +V I+ G S+ LA++ +  
Sbjct: 631 STGQVYAWGCGACLGCGSSEATALRPKL-----VEELAATRIVDISIGDSHCLALSHDNE 685

Query: 290 VYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           VY++G+ S    G G     + +P+ +      GI + ++SAG  H +A
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGL--DGIAIQQISAGTSHSLA 732



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 105/229 (45%), Gaps = 13/229 (5%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ ++ S+  +F+ G+   G LG G  + + +   R+       + QV+   
Sbjct: 4136 VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 4194

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G +   F  GD      G+         P+ V+ L G+  K+V  G  F+ 
Sbjct: 4195 NHTLAVSTDGSMVWAFGDGDYGKLGLGNSTAKS---SPQKVDVLCGIGIKKVACGTQFSV 4251

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNG 288
             LT  GHV+T G +    L  G   +   P+ I  L   G V++ +A G  + LA+  NG
Sbjct: 4252 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVL--AGVVIEDVAVGAEHTLALASNG 4309

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             VY++GS S   LG G  +   +P  +   + K I   ++SAG  H  A
Sbjct: 4310 DVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIR--QISAGRCHSAA 4356



 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 84/189 (44%), Gaps = 14/189 (7%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSG 342
           H +AL   G
Sbjct: 572 HTIALSKDG 580



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 84/175 (48%), Gaps = 7/175 (4%)

Query: 115 QITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++ G  HT+ +S    +V+S G    G LGHG +T +      I       + +V A  
Sbjct: 565 EVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEALQGMFIRKVCAGS 623

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             +  +  +GQV+  G  +   CG  +      RP+LVE L       ++ G +    L+
Sbjct: 624 QSSLALTSTGQVYAWGCGACLGCGSSEAT--ALRPKLVEELAATRIVDISIGDSHCLALS 681

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
               V+  G+N+ GQ G G++    T PK ++ L+ + ++ QI+AG S+ LA T 
Sbjct: 682 HDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI-AIQQISAGTSHSLAWTA 735



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 65/128 (50%), Gaps = 4/128 (3%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 4029 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4088

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H  
Sbjct: 4089 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 4146

Query: 337  ALDSSGYV 344
             + S G +
Sbjct: 4147 VVTSDGKL 4154



 Score = 48.5 bits (114), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 79/180 (43%), Gaps = 11/180 (6%)

Query: 115  QITTGRYHTLLISN--SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HTL +S   S V++ G    G LG G  T +  S  +++      + +V+   
Sbjct: 4189 QVACGLNHTLAVSTDGSMVWAFGDGDYGKLGLGNSTAKS-SPQKVDVLCGIGIKKVACGT 4247

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + +  L GV  + V  G   T 
Sbjct: 4248 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQIPVLAGVVIEDVAVGAEHTL 4303

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L   G V+  GSN+ GQLG G T     P  +  L+   ++ QI+AG  +  A T   V
Sbjct: 4304 ALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQG-KNIRQISAGRCHSAAWTAPPV 4362


>gi|355778100|gb|EHH63136.1| hypothetical protein EGM_16043 [Macaca fascicularis]
          Length = 4862

 Score =  100 bits (250), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 73/235 (31%), Positives = 124/235 (52%), Gaps = 13/235 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           V+SFG G N  LGHG+ +   +P+ I+    +G+ + +V AG +  +AL S+G V
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEAL--QGMFIRKVCAGSQSSLALTSTGQV 635



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 75/237 (31%), Positives = 124/237 (52%), Gaps = 14/237 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4089

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4090 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4148

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4149 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4205

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             +V++FG G    LG G    +  P+ I      GI + +V+ G +  VAL   G+V
Sbjct: 4206 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL--CGIGIKKVACGTQFSVALTKDGHV 4260



 Score = 84.7 bits (208), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 71/225 (31%), Positives = 110/225 (48%), Gaps = 7/225 (3%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 4093 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTS 4151

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHT 239
             G++FT G+      G  +T+     P  V AL+G    QV  GLN T  ++  G  V  
Sbjct: 4152 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 4210

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ I  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 4211 FGDGDYGKLGLGNSTAKSSPQKIDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 4269

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             L  G   +  +P+ I      G+ +  V+ G EH +AL S+G V
Sbjct: 4270 GLPEGRARNHNRPQQIPVL--AGMIIEDVAVGAEHTLALASNGDV 4312



 Score = 84.7 bits (208), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 80/222 (36%), Positives = 113/222 (50%), Gaps = 15/222 (6%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 298 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             CLG G  +   L+P+ I+        +V VS GD H +AL
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLAL 680



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 110/234 (47%), Gaps = 38/234 (16%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS----AAHVVQVSASENHA 175
           R+   +  +  +++ G    G LGHG   ++       N P+     ++V +VS   +H 
Sbjct: 521 RHSAAVTEDGELYTWGEGDFGRLGHGDSNSR-------NIPTLVKDISNVGEVSCGSSHT 573

Query: 176 AFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             + + G+    F  GDN     GH DTNR +++P+++EAL+G+  ++V AG   +  LT
Sbjct: 574 IALSKDGRTVWSFGGGDNGKL--GHGDTNR-VYKPKVIEALQGMFIRKVCAGSQSSLALT 630

Query: 233 IRGHVHT--------CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             G V+         CGS+    L          PK I  L     +V ++ G S+ LA+
Sbjct: 631 STGQVYAWGCGACLGCGSSEATAL---------RPKLIEELAAT-RIVDVSIGDSHCLAL 680

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           + +  VY++G+ S    G G     + +P+ +      GI + ++SAG  H +A
Sbjct: 681 SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGL--DGIAIQQISAGTSHSLA 732



 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 105/229 (45%), Gaps = 13/229 (5%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ ++ S+  +F+ G+   G LG G  + + +   R+       + QV+   
Sbjct: 4137 VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 4195

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G +   F  GD      G+         P+ ++ L G+  K+V  G  F+ 
Sbjct: 4196 NHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS---SPQKIDVLCGIGIKKVACGTQFSV 4252

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNG 288
             LT  GHV+T G +    L  G   +   P+ I  L   G +++ +A G  + LA+  NG
Sbjct: 4253 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVL--AGMIIEDVAVGAEHTLALASNG 4310

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             VY++GS S   LG G  +   +P  +   + K I   ++SAG  H  A
Sbjct: 4311 DVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNIR--QISAGRCHSAA 4357



 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 84/189 (44%), Gaps = 14/189 (7%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSG 342
           H +AL   G
Sbjct: 572 HTIALSKDG 580



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 84/175 (48%), Gaps = 7/175 (4%)

Query: 115 QITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++ G  HT+ +S    +V+S G    G LGHG +T +      I       + +V A  
Sbjct: 565 EVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEALQGMFIRKVCAGS 623

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             +  +  +GQV+  G  +   CG  +      RP+L+E L       V+ G +    L+
Sbjct: 624 QSSLALTSTGQVYAWGCGACLGCGSSEAT--ALRPKLIEELAATRIVDVSIGDSHCLALS 681

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
               V+  G+N+ GQ G G++    T PK ++ L+ + ++ QI+AG S+ LA T 
Sbjct: 682 HDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI-AIQQISAGTSHSLAWTA 735



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 65/128 (50%), Gaps = 4/128 (3%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 4030 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4089

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H  
Sbjct: 4090 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 4147

Query: 337  ALDSSGYV 344
             + S G +
Sbjct: 4148 VVTSDGKL 4155



 Score = 47.8 bits (112), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 92/218 (42%), Gaps = 14/218 (6%)

Query: 115  QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HTL +S   S V++ G    G LG G  T +  S  +I+      + +V+   
Sbjct: 4190 QVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKIDVLCGIGIKKVACGT 4248

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + +  L G+  + V  G   T 
Sbjct: 4249 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQIPVLAGMIIEDVAVGAEHTL 4304

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L   G V+  GSN+ GQLG G T     P  +  L+   ++ QI+AG  +  A T   V
Sbjct: 4305 ALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQG-KNIRQISAGRCHSAAWTAPPV 4363

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR 327
                  G +  L  G   D L P+     R   IH VR
Sbjct: 4364 P-PRAPGVSVPLQLG-LPDTLPPQ-YGALREVSIHTVR 4398


>gi|327286813|ref|XP_003228124.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC1-like [Anolis carolinensis]
          Length = 4963

 Score =  100 bits (250), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 73/235 (31%), Positives = 124/235 (52%), Gaps = 13/235 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 410 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 468

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 469 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 527

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 528 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 584

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           V+SFG G N  LGHG+ +   +P+ I+    +G+ + +V AG +  +AL S+G V
Sbjct: 585 VWSFGGGDNGKLGHGDTNRVYKPKVIEAL--QGMFIRKVCAGSQSSLALTSTGQV 637



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 73/237 (30%), Positives = 124/237 (52%), Gaps = 14/237 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4122 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4180

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4181 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4239

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +A LE  ++G   ++A G ++ L V+ +G
Sbjct: 4240 VTADGKLFTFGNGDYGRLGLGNTSNKKLPERVAALEGYQIG---EVACGLNHTLVVSTDG 4296

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+V
Sbjct: 4297 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDIL--CGIGIKKVACGTQFSVALTKDGHV 4351



 Score = 84.7 bits (208), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 68/225 (30%), Positives = 110/225 (48%), Gaps = 7/225 (3%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 4184 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTA 4242

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHT 239
             G++FT G+      G  +T+     P  V AL+G    +V  GLN T  ++  G  V  
Sbjct: 4243 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVAALEGYQIGEVACGLNHTLVVSTDGSMVWA 4301

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ +  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 4302 FGDGDYGKLGLGNSTAKSSPQKVDILCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 4360

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             L  G   +  +P+ +      G+ V  ++ G EH +AL +SG V
Sbjct: 4361 GLPEGRARNHNRPQQVPAL--SGVFVEDIAVGAEHTLALSASGDV 4403



 Score = 84.3 bits (207), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 79/222 (35%), Positives = 113/222 (50%), Gaps = 15/222 (6%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 471 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 529

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 530 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 585

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 586 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 644

Query: 298 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             CLG G  +   L+P+ I+        +V +S GD H +AL
Sbjct: 645 --CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLAL 682



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 69/267 (25%), Positives = 122/267 (45%), Gaps = 44/267 (16%)

Query: 87  NGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGP 146
           N + ++  + +Q       +V  SAG       R+   +  +  +++ G    G LGHG 
Sbjct: 496 NSSTQKYPKLIQGPLQGKVVVCVSAGY------RHSAAVTEDGELYTWGEGDFGRLGHGD 549

Query: 147 ETTQCVSFTRINFPS----AAHVVQVSASENHAAFVLQSGQV---FTCGDNSSFCCGHRD 199
             ++       N P+     ++V +VS   +H   + + G+    F  GDN     GH D
Sbjct: 550 SNSR-------NIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKL--GHGD 600

Query: 200 TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT--------CGSNTHGQLGHG 251
           TNR +++P+++EAL+G+  ++V AG   +  LT  G V+         CGS+    L   
Sbjct: 601 TNR-VYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATAL--- 656

Query: 252 DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL- 310
                  PK I  L     +V I+ G S+ LA++ +  VY++G+ S    G G     + 
Sbjct: 657 ------RPKLIEELAAT-RIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPIT 709

Query: 311 QPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           +P+ +      G+ + ++SAG  H +A
Sbjct: 710 KPKKVSGL--DGVAIQQISAGTSHSLA 734



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 62/231 (26%), Positives = 106/231 (45%), Gaps = 11/231 (4%)

Query: 114  MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ +++ +  +F+ G+   G LG G  + + +   R+       + +V+   
Sbjct: 4228 VQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLP-ERVAALEGYQIGEVACGL 4286

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G +   F  GD      G+         P+ V+ L G+  K+V  G  F+ 
Sbjct: 4287 NHTLVVSTDGSMVWAFGDGDYGKLGLGNSTAKS---SPQKVDILCGIGIKKVACGTQFSV 4343

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             LT  GHV+T G +    L  G   +   P+ +  L  V  V  IA G  + LA++ +G 
Sbjct: 4344 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPALSGV-FVEDIAVGAEHTLALSASGD 4402

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            VY++GS S   LG G  +   +P  + + + K +   ++SAG  H  A  S
Sbjct: 4403 VYAWGSNSEGQLGLGHTNHVREPTLVTSLQGKSVR--QISAGRCHSAAWSS 4451



 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 70/253 (27%), Positives = 105/253 (41%), Gaps = 17/253 (6%)

Query: 96  FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
           F +    +SD   T A    I TG    ++     V+  GS+    L  G   TQ     
Sbjct: 341 FEEVCRMASDYSRTCASPDSIQTGGDAPVVSETCEVYVWGSNSSHQLVEG---TQEKILQ 397

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRL 209
               PS +    + A +     +   G V  CG  S    G  D+N      +  F P  
Sbjct: 398 PKLAPSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH- 456

Query: 210 VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 269
             ++K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +  
Sbjct: 457 -RSIKKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK 513

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
            VV ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS
Sbjct: 514 VVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVS 569

Query: 330 AGDEHVVALDSSG 342
            G  H +AL   G
Sbjct: 570 CGSSHTIALSKDG 582



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 84/175 (48%), Gaps = 7/175 (4%)

Query: 115 QITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++ G  HT+ +S    +V+S G    G LGHG +T +      I       + +V A  
Sbjct: 567 EVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEALQGMFIRKVCAGS 625

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             +  +  +GQV+  G  +   CG  +      RP+L+E L       ++ G +    L+
Sbjct: 626 QSSLALTSTGQVYAWGCGACLGCGSSEAT--ALRPKLIEELAATRIVDISIGDSHCLALS 683

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
               V+  G+N+ GQ G G++    T PK ++ L+ V ++ QI+AG S+ LA T 
Sbjct: 684 HDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGV-AIQQISAGTSHSLAWTA 737



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 65/128 (50%), Gaps = 4/128 (3%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE--VGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 4121 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4180

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H  
Sbjct: 4181 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 4238

Query: 337  ALDSSGYV 344
             + + G +
Sbjct: 4239 VVTADGKL 4246


>gi|380788265|gb|AFE66008.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
          Length = 4861

 Score =  100 bits (250), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 73/235 (31%), Positives = 124/235 (52%), Gaps = 13/235 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           V+SFG G N  LGHG+ +   +P+ I+    +G+ + +V AG +  +AL S+G V
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEAL--QGMFIRKVCAGSQSSLALTSTGQV 635



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 75/237 (31%), Positives = 124/237 (52%), Gaps = 14/237 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4089

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4090 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4148

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4149 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4205

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             +V++FG G    LG G    +  P+ I      GI + +V+ G +  VAL   G+V
Sbjct: 4206 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL--CGIGIKKVACGTQFSVALTKDGHV 4260



 Score = 84.7 bits (208), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 80/222 (36%), Positives = 113/222 (50%), Gaps = 15/222 (6%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 298 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             CLG G  +   L+P+ I+        +V VS GD H +AL
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLAL 680



 Score = 84.7 bits (208), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 71/225 (31%), Positives = 110/225 (48%), Gaps = 7/225 (3%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 4093 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTS 4151

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHT 239
             G++FT G+      G  +T+     P  V AL+G    QV  GLN T  ++  G  V  
Sbjct: 4152 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 4210

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ I  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 4211 FGDGDYGKLGLGNSTAKSSPQKIDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 4269

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             L  G   +  +P+ I      G+ +  V+ G EH +AL S+G V
Sbjct: 4270 GLPEGRARNHNRPQQIPVL--AGMIIEDVAVGAEHTLALASNGDV 4312



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 110/234 (47%), Gaps = 38/234 (16%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS----AAHVVQVSASENHA 175
           R+   +  +  +++ G    G LGHG   ++       N P+     ++V +VS   +H 
Sbjct: 521 RHSAAVTEDGELYTWGEGDFGRLGHGDSNSR-------NIPTLVKDISNVGEVSCGSSHT 573

Query: 176 AFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             + + G+    F  GDN     GH DTNR +++P+++EAL+G+  ++V AG   +  LT
Sbjct: 574 IALSKDGRTVWSFGGGDNGKL--GHGDTNR-VYKPKVIEALQGMFIRKVCAGSQSSLALT 630

Query: 233 IRGHVHT--------CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             G V+         CGS+    L          PK I  L     +V ++ G S+ LA+
Sbjct: 631 STGQVYAWGCGACLGCGSSEATAL---------RPKLIEELAAT-RIVDVSIGDSHCLAL 680

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           + +  VY++G+ S    G G     + +P+ +      GI + ++SAG  H +A
Sbjct: 681 SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGL--DGIAIQQISAGTSHSLA 732



 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 13/229 (5%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ ++ S+  +F+ G+   G LG G  + + +   R+       + QV+   
Sbjct: 4137 VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 4195

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G +   F  GD      G+         P+ ++ L G+  K+V  G  F+ 
Sbjct: 4196 NHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS---SPQKIDVLCGIGIKKVACGTQFSV 4252

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNG 288
             LT  GHV+T G +    L  G   +   P+ I  L   G +++ +A G  + LA+  NG
Sbjct: 4253 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVL--AGMIIEDVAVGAEHTLALASNG 4310

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             VY++GS S   LG G  +   +P  +     +G +V ++SAG  H  A
Sbjct: 4311 DVYAWGSNSEGQLGLGHTNHVREPTLVTGL--QGKNVRQISAGRCHSAA 4357



 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 84/189 (44%), Gaps = 14/189 (7%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSG 342
           H +AL   G
Sbjct: 572 HTIALSKDG 580



 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 84/175 (48%), Gaps = 7/175 (4%)

Query: 115 QITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++ G  HT+ +S    +V+S G    G LGHG +T +      I       + +V A  
Sbjct: 565 EVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEALQGMFIRKVCAGS 623

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             +  +  +GQV+  G  +   CG  +      RP+L+E L       V+ G +    L+
Sbjct: 624 QSSLALTSTGQVYAWGCGACLGCGSSEAT--ALRPKLIEELAATRIVDVSIGDSHCLALS 681

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
               V+  G+N+ GQ G G++    T PK ++ L+ + ++ QI+AG S+ LA T 
Sbjct: 682 HDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI-AIQQISAGTSHSLAWTA 735



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 65/128 (50%), Gaps = 4/128 (3%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 4030 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4089

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H  
Sbjct: 4090 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 4147

Query: 337  ALDSSGYV 344
             + S G +
Sbjct: 4148 VVTSDGKL 4155



 Score = 48.1 bits (113), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 92/218 (42%), Gaps = 14/218 (6%)

Query: 115  QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HTL +S   S V++ G    G LG G  T +  S  +I+      + +V+   
Sbjct: 4190 QVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKIDVLCGIGIKKVACGT 4248

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + +  L G+  + V  G   T 
Sbjct: 4249 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQIPVLAGMIIEDVAVGAEHTL 4304

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L   G V+  GSN+ GQLG G T     P  +  L+   +V QI+AG  +  A T   V
Sbjct: 4305 ALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQG-KNVRQISAGRCHSAAWTAPPV 4363

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR 327
                  G +  L  G   D L P+     R   IH VR
Sbjct: 4364 P-PRAPGVSVPLQLG-LPDTLPPQ-YGALREVSIHTVR 4398


>gi|344293366|ref|XP_003418394.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Loxodonta
           africana]
          Length = 4858

 Score =  100 bits (250), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 73/235 (31%), Positives = 124/235 (52%), Gaps = 13/235 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIRKVSSSKGS 466

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           V+SFG G N  LGHG+ +   +P+ I+    +G+ + +V AG +  +AL S+G V
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEAL--QGMFIRKVCAGSQSSLALTSTGQV 635



 Score = 94.0 bits (232), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 124/237 (52%), Gaps = 14/237 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4028 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4086

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4087 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4145

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4146 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSSDG 4202

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+V
Sbjct: 4203 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHV 4257



 Score = 84.3 bits (207), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 70/225 (31%), Positives = 110/225 (48%), Gaps = 7/225 (3%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 4090 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTS 4148

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHT 239
             G++FT G+      G  +T+     P  V AL+G    QV  GLN T  ++  G  V  
Sbjct: 4149 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSSDGSMVWA 4207

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ +  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 4208 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 4266

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             L  G   +  +P+ I      G+ +  V+ G EH +AL S+G V
Sbjct: 4267 GLPEGRARNHNRPQQIPVL--AGVVIEDVAVGAEHTLALASTGDV 4309



 Score = 84.3 bits (207), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 79/222 (35%), Positives = 113/222 (50%), Gaps = 15/222 (6%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 298 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             CLG G  +   L+P+ I+        +V +S GD H +AL
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLAL 680



 Score = 67.8 bits (164), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 110/234 (47%), Gaps = 38/234 (16%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS----AAHVVQVSASENHA 175
           R+   +  +  +++ G    G LGHG   ++       N P+     ++V +VS   +H 
Sbjct: 521 RHSAAVTEDGELYTWGEGDFGRLGHGDSNSR-------NIPTLVKDISNVGEVSCGSSHT 573

Query: 176 AFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             + + G+    F  GDN     GH DTNR +++P+++EAL+G+  ++V AG   +  LT
Sbjct: 574 IALSKDGRTVWSFGGGDNGKL--GHGDTNR-VYKPKVIEALQGMFIRKVCAGSQSSLALT 630

Query: 233 IRGHVHT--------CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             G V+         CGS+    L          PK I  L     +V I+ G S+ LA+
Sbjct: 631 STGQVYAWGCGACLGCGSSEATAL---------RPKLIEELAAT-RIVDISIGDSHCLAL 680

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           + +  VY++G+ S    G G     + +P+ +      GI + ++SAG  H +A
Sbjct: 681 SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGL--DGIAIQQISAGTSHSLA 732



 Score = 64.7 bits (156), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 105/229 (45%), Gaps = 13/229 (5%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ ++ S+  +F+ G+   G LG G  + + +   R+       + QV+   
Sbjct: 4134 VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 4192

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G +   F  GD      G+         P+ V+ L G+  K+V  G  F+ 
Sbjct: 4193 NHTLAVSSDGSMVWAFGDGDYGKLGLGNSTAKS---SPQKVDVLCGIGIKKVACGTQFSV 4249

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNG 288
             LT  GHV+T G +    L  G   +   P+ I  L   G V++ +A G  + LA+   G
Sbjct: 4250 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVL--AGVVIEDVAVGAEHTLALASTG 4307

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             VY++GS S   LG G  +   +P  +     +G +V ++SAG  H  A
Sbjct: 4308 DVYAWGSNSEGQLGLGHTNHVREPTLVTVL--QGKNVRQISAGRCHSAA 4354



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 70/253 (27%), Positives = 105/253 (41%), Gaps = 18/253 (7%)

Query: 96  FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
           F +    +SD   T A    I TG    L+     V+  GS+    L  G   TQ     
Sbjct: 340 FEEVCRMASDYSRTCASPDSIQTGDA-PLVSETCEVYVWGSNSSHQLVEG---TQEKILQ 395

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRL 209
               PS +    + A +     +   G V  CG  S    G  D+N      +  F P  
Sbjct: 396 PKLAPSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH- 454

Query: 210 VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 269
             +++ V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +  
Sbjct: 455 -RSIRKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK 511

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
            VV ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS
Sbjct: 512 VVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVS 567

Query: 330 AGDEHVVALDSSG 342
            G  H +AL   G
Sbjct: 568 CGSSHTIALSKDG 580



 Score = 58.5 bits (140), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 84/175 (48%), Gaps = 7/175 (4%)

Query: 115 QITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++ G  HT+ +S    +V+S G    G LGHG +T +      I       + +V A  
Sbjct: 565 EVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEALQGMFIRKVCAGS 623

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             +  +  +GQV+  G  +   CG  +      RP+L+E L       ++ G +    L+
Sbjct: 624 QSSLALTSTGQVYAWGCGACLGCGSSEAT--ALRPKLIEELAATRIVDISIGDSHCLALS 681

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
               V+  G+N+ GQ G G++    T PK ++ L+ + ++ QI+AG S+ LA T 
Sbjct: 682 HDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI-AIQQISAGTSHSLAWTA 735



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 65/128 (50%), Gaps = 4/128 (3%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 4027 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4086

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H  
Sbjct: 4087 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 4144

Query: 337  ALDSSGYV 344
             + S G +
Sbjct: 4145 VVTSDGKL 4152



 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 80/180 (44%), Gaps = 11/180 (6%)

Query: 115  QITTGRYHTLLISN--SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HTL +S+  S V++ G    G LG G  T +  S  +++      + +V+   
Sbjct: 4187 QVACGLNHTLAVSSDGSMVWAFGDGDYGKLGLGNSTAKS-SPQKVDVLCGIGIKKVACGT 4245

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + +  L GV  + V  G   T 
Sbjct: 4246 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQIPVLAGVVIEDVAVGAEHTL 4301

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L   G V+  GSN+ GQLG G T     P  +  L+   +V QI+AG  +  A T   V
Sbjct: 4302 ALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQG-KNVRQISAGRCHSAAWTAPPV 4360


>gi|392350138|ref|XP_236362.6| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Rattus
           norvegicus]
          Length = 4859

 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 73/235 (31%), Positives = 124/235 (52%), Gaps = 13/235 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           V+SFG G N  LGHG+ +   +P+ I+    +G+ + +V AG +  +AL S+G V
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEAL--QGMFIRKVCAGSQSSLALTSTGQV 635



 Score = 94.4 bits (233), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 124/237 (52%), Gaps = 14/237 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4029 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4087

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4088 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4146

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4147 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4203

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+V
Sbjct: 4204 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHV 4258



 Score = 84.7 bits (208), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 70/225 (31%), Positives = 110/225 (48%), Gaps = 7/225 (3%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 4091 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTS 4149

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHT 239
             G++FT G+      G  +T+     P  V AL+G    QV  GLN T  ++  G  V  
Sbjct: 4150 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 4208

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ +  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 4209 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 4267

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             L  G   +  +P+ I      G+ +  V+ G EH +AL S+G V
Sbjct: 4268 GLPEGRARNHNRPQQIPVL--AGVVIEDVAVGAEHTLALASTGDV 4310



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 78/222 (35%), Positives = 113/222 (50%), Gaps = 15/222 (6%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 298 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             CLG G  +   L+P+ I+        +V +S GD H ++L
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLSL 680



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 110/234 (47%), Gaps = 38/234 (16%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS----AAHVVQVSASENHA 175
           R+   +  +  +++ G    G LGHG   ++       N P+     ++V +VS   +H 
Sbjct: 521 RHSAAVTEDGELYTWGEGDFGRLGHGDSNSR-------NIPTLVKDISNVGEVSCGSSHT 573

Query: 176 AFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             + + G+    F  GDN     GH DTNR +++P+++EAL+G+  ++V AG   +  LT
Sbjct: 574 IALSKDGRTVWSFGGGDNGKL--GHGDTNR-VYKPKVIEALQGMFIRKVCAGSQSSLALT 630

Query: 233 IRGHVHT--------CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             G V+         CGS+    L          PK I  L     +V I+ G S+ L++
Sbjct: 631 STGQVYAWGCGACLGCGSSEATAL---------RPKLIEELAAT-RIVDISIGDSHCLSL 680

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           + +  VY++G+ S    G G     + +P+ +      GI + ++SAG  H +A
Sbjct: 681 SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGL--DGIAIQQISAGTSHSLA 732



 Score = 63.9 bits (154), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 104/229 (45%), Gaps = 13/229 (5%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ ++ S+  +F+ G+   G LG G  + + +   R+       + QV+   
Sbjct: 4135 VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 4193

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G +   F  GD      G+         P+ V+ L G+  K+V  G  F+ 
Sbjct: 4194 NHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS---SPQKVDVLCGIGIKKVACGTQFSV 4250

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNG 288
             LT  GHV+T G +    L  G   +   P+ I  L   G V++ +A G  + LA+   G
Sbjct: 4251 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVL--AGVVIEDVAVGAEHTLALASTG 4308

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             VY++GS S   LG G  +   +P  +   + K I   ++SAG  H  A
Sbjct: 4309 DVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIR--QISAGRCHSAA 4355



 Score = 61.2 bits (147), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 84/189 (44%), Gaps = 14/189 (7%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSG 342
           H +AL   G
Sbjct: 572 HTIALSKDG 580



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 84/175 (48%), Gaps = 7/175 (4%)

Query: 115 QITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++ G  HT+ +S    +V+S G    G LGHG +T +      I       + +V A  
Sbjct: 565 EVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEALQGMFIRKVCAGS 623

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             +  +  +GQV+  G  +   CG  +      RP+L+E L       ++ G +    L+
Sbjct: 624 QSSLALTSTGQVYAWGCGACLGCGSSEAT--ALRPKLIEELAATRIVDISIGDSHCLSLS 681

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
               V+  G+N+ GQ G G++    T PK ++ L+ + ++ QI+AG S+ LA T 
Sbjct: 682 HDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI-AIQQISAGTSHSLAWTA 735



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 65/128 (50%), Gaps = 4/128 (3%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 4028 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4087

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H  
Sbjct: 4088 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 4145

Query: 337  ALDSSGYV 344
             + S G +
Sbjct: 4146 VVTSDGKL 4153



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 79/180 (43%), Gaps = 11/180 (6%)

Query: 115  QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HTL +S   S V++ G    G LG G  T +  S  +++      + +V+   
Sbjct: 4188 QVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKVDVLCGIGIKKVACGT 4246

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + +  L GV  + V  G   T 
Sbjct: 4247 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQIPVLAGVVIEDVAVGAEHTL 4302

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L   G V+  GSN+ GQLG G T     P  +  L+   ++ QI+AG  +  A T   V
Sbjct: 4303 ALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQG-KNIRQISAGRCHSAAWTAPPV 4361


>gi|149574281|ref|XP_001514757.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1
           [Ornithorhynchus anatinus]
          Length = 4866

 Score =  100 bits (249), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 73/235 (31%), Positives = 124/235 (52%), Gaps = 13/235 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           V+SFG G N  LGHG+ +   +P+ I+    +G+ + +V AG +  +AL S+G V
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEAL--QGMFIRKVCAGSQSSLALTSTGQV 635



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 124/237 (52%), Gaps = 14/237 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4036 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4094

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4095 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4153

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4154 VTADGKMFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSTDG 4210

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+V
Sbjct: 4211 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHV 4265



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 78/222 (35%), Positives = 113/222 (50%), Gaps = 15/222 (6%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 298 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             CLG G  +   L+P+ ++        +V +S GD H +AL
Sbjct: 643 --CLGCGSSEATALRPKLVEEL--AATRIVDISIGDSHCLAL 680



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/225 (30%), Positives = 110/225 (48%), Gaps = 7/225 (3%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 4098 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTA 4156

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHT 239
             G++FT G+      G  +T+     P  V AL+G    QV  GLN T  ++  G  V  
Sbjct: 4157 DGKMFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSTDGSMVWA 4215

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ +  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 4216 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 4274

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             L  G   +  +P+ +      G+ +  V+ G EH +A+ S+G V
Sbjct: 4275 GLPEGRARNHNRPQQVPVL--AGVVIEDVAVGAEHTLAITSTGDV 4317



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/229 (27%), Positives = 112/229 (48%), Gaps = 28/229 (12%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS----AAHVVQVSASENHA 175
           R+   +  +  +++ G    G LGHG   ++       N P+     ++V +VS   +H 
Sbjct: 521 RHSAAVTEDGELYTWGEGDFGRLGHGDSNSR-------NIPTLVKDISNVGEVSCGSSHT 573

Query: 176 AFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             + + G+    F  GDN     GH DTNR +++P+++EAL+G+  ++V AG   +  LT
Sbjct: 574 IALSKDGRTVWSFGGGDNGKL--GHGDTNR-VYKPKVIEALQGMFIRKVCAGSQSSLALT 630

Query: 233 IRGHVHTCGSNTHGQLGHGD-TLDRPTPKSIAPLEEVGS--VVQIAAGPSYMLAVTGNGV 289
             G V+  G       G  + T  RP       +EE+ +  +V I+ G S+ LA++ +  
Sbjct: 631 STGQVYAWGCGACLGCGSSEATALRPKL-----VEELAATRIVDISIGDSHCLALSHDNE 685

Query: 290 VYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           VY++G+ S    G G     + +P+ +      G+ + ++SAG  H +A
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGL--DGVAIQQISAGTSHSLA 732



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 105/229 (45%), Gaps = 13/229 (5%)

Query: 114  MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ +++ +  +F+ G+   G LG G  + + +   R+       + QV+   
Sbjct: 4142 VQMSCGFKHSAVVTADGKMFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 4200

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G +   F  GD      G+         P+ V+ L G+  K+V  G  F+ 
Sbjct: 4201 NHTLAVSTDGSMVWAFGDGDYGKLGLGNSTAKS---SPQKVDVLCGIGIKKVACGTQFSV 4257

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNG 288
             LT  GHV+T G +    L  G   +   P+ +  L   G V++ +A G  + LA+T  G
Sbjct: 4258 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPVL--AGVVIEDVAVGAEHTLAITSTG 4315

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             VY++GS S   LG G  +   +P  I   + K I   ++SAG  H  A
Sbjct: 4316 DVYAWGSNSEGQLGLGHTNHVREPTLITVLQGKNIR--QISAGRCHSAA 4362



 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 72/254 (28%), Positives = 108/254 (42%), Gaps = 20/254 (7%)

Query: 96  FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSF 154
           F +    +SD   T A    I TG   T ++S +  V+  GS+    L  G   TQ    
Sbjct: 340 FEEVCRMASDYSRTCASPDSIQTG--DTPIVSETCEVYVWGSNSSHQLVEG---TQEKIL 394

Query: 155 TRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPR 208
                PS +    + A +     +   G V  CG  S    G  D+N      +  F P 
Sbjct: 395 QPKLAPSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH 454

Query: 209 LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 268
              ++K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    + 
Sbjct: 455 --RSIKKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQG 510

Query: 269 GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 328
             VV ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  V
Sbjct: 511 KVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEV 566

Query: 329 SAGDEHVVALDSSG 342
           S G  H +AL   G
Sbjct: 567 SCGSSHTIALSKDG 580



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 50/175 (28%), Positives = 84/175 (48%), Gaps = 7/175 (4%)

Query: 115 QITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++ G  HT+ +S    +V+S G    G LGHG +T +      I       + +V A  
Sbjct: 565 EVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEALQGMFIRKVCAGS 623

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             +  +  +GQV+  G  +   CG  +      RP+LVE L       ++ G +    L+
Sbjct: 624 QSSLALTSTGQVYAWGCGACLGCGSSEAT--ALRPKLVEELAATRIVDISIGDSHCLALS 681

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
               V+  G+N+ GQ G G++    T PK ++ L+ V ++ QI+AG S+ LA T 
Sbjct: 682 HDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGV-AIQQISAGTSHSLAWTA 735



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 65/128 (50%), Gaps = 4/128 (3%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 4035 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4094

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H  
Sbjct: 4095 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 4152

Query: 337  ALDSSGYV 344
             + + G +
Sbjct: 4153 VVTADGKM 4160



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 53/180 (29%), Positives = 80/180 (44%), Gaps = 11/180 (6%)

Query: 115  QITTGRYHTLLISN--SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HTL +S   S V++ G    G LG G  T +  S  +++      + +V+   
Sbjct: 4195 QVACGLNHTLAVSTDGSMVWAFGDGDYGKLGLGNSTAKS-SPQKVDVLCGIGIKKVACGT 4253

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + V  L GV  + V  G   T 
Sbjct: 4254 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQVPVLAGVVIEDVAVGAEHTL 4309

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             +T  G V+  GSN+ GQLG G T     P  I  L+   ++ QI+AG  +  A T   V
Sbjct: 4310 AITSTGDVYAWGSNSEGQLGLGHTNHVREPTLITVLQG-KNIRQISAGRCHSAAWTAPPV 4368


>gi|257196144|ref|NP_663592.3| hect domain and RCC1-like domain 1 [Mus musculus]
          Length = 4859

 Score =  100 bits (249), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 73/235 (31%), Positives = 124/235 (52%), Gaps = 13/235 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           V+SFG G N  LGHG+ +   +P+ I+    +G+ + +V AG +  +AL S+G V
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEAL--QGMFIRKVCAGSQSSLALTSTGQV 635



 Score = 94.0 bits (232), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 124/237 (52%), Gaps = 14/237 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4029 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4087

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4088 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4146

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4147 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4203

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+V
Sbjct: 4204 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHV 4258



 Score = 84.7 bits (208), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 70/225 (31%), Positives = 110/225 (48%), Gaps = 7/225 (3%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 4091 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTS 4149

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHT 239
             G++FT G+      G  +T+     P  V AL+G    QV  GLN T  ++  G  V  
Sbjct: 4150 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 4208

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ +  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 4209 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 4267

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             L  G   +  +P+ I      G+ +  V+ G EH +AL S+G V
Sbjct: 4268 GLPEGRARNHNRPQQIPVL--AGVVIEDVAVGAEHTLALASTGDV 4310



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 78/222 (35%), Positives = 113/222 (50%), Gaps = 15/222 (6%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 298 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             CLG G  +   L+P+ I+        +V +S GD H ++L
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLSL 680



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 110/234 (47%), Gaps = 38/234 (16%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS----AAHVVQVSASENHA 175
           R+   +  +  +++ G    G LGHG   ++       N P+     ++V +VS   +H 
Sbjct: 521 RHSAAVTEDGELYTWGEGDFGRLGHGDSNSR-------NIPTLVKDISNVGEVSCGSSHT 573

Query: 176 AFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             + + G+    F  GDN     GH DTNR +++P+++EAL+G+  ++V AG   +  LT
Sbjct: 574 IALSKDGRTVWSFGGGDNGKL--GHGDTNR-VYKPKVIEALQGMFIRKVCAGSQSSLALT 630

Query: 233 IRGHVHT--------CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             G V+         CGS+    L          PK I  L     +V I+ G S+ L++
Sbjct: 631 STGQVYAWGCGACLGCGSSEATAL---------RPKLIEELAAT-RIVDISIGDSHCLSL 680

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           + +  VY++G+ S    G G     + +P+ +      GI + ++SAG  H +A
Sbjct: 681 SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGL--DGIAIQQISAGTSHSLA 732



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 104/229 (45%), Gaps = 13/229 (5%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ ++ S+  +F+ G+   G LG G  + + +   R+       + QV+   
Sbjct: 4135 VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 4193

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G +   F  GD      G+         P+ V+ L G+  K+V  G  F+ 
Sbjct: 4194 NHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS---SPQKVDVLCGIGIKKVACGTQFSV 4250

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNG 288
             LT  GHV+T G +    L  G   +   P+ I  L   G V++ +A G  + LA+   G
Sbjct: 4251 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVL--AGVVIEDVAVGAEHTLALASTG 4308

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             VY++GS S   LG G  +   +P  +   + K I   ++SAG  H  A
Sbjct: 4309 DVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIR--QISAGRCHSAA 4355



 Score = 61.2 bits (147), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 84/189 (44%), Gaps = 14/189 (7%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSG 342
           H +AL   G
Sbjct: 572 HTIALSKDG 580



 Score = 58.2 bits (139), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 84/175 (48%), Gaps = 7/175 (4%)

Query: 115 QITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++ G  HT+ +S    +V+S G    G LGHG +T +      I       + +V A  
Sbjct: 565 EVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEALQGMFIRKVCAGS 623

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             +  +  +GQV+  G  +   CG  +      RP+L+E L       ++ G +    L+
Sbjct: 624 QSSLALTSTGQVYAWGCGACLGCGSSEAT--ALRPKLIEELAATRIVDISIGDSHCLSLS 681

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
               V+  G+N+ GQ G G++    T PK ++ L+ + ++ QI+AG S+ LA T 
Sbjct: 682 HDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI-AIQQISAGTSHSLAWTA 735



 Score = 57.8 bits (138), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 65/128 (50%), Gaps = 4/128 (3%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 4028 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4087

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H  
Sbjct: 4088 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 4145

Query: 337  ALDSSGYV 344
             + S G +
Sbjct: 4146 VVTSDGKL 4153



 Score = 47.8 bits (112), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 79/180 (43%), Gaps = 11/180 (6%)

Query: 115  QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HTL +S   S V++ G    G LG G  T +  S  +++      + +V+   
Sbjct: 4188 QVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKVDVLCGIGIKKVACGT 4246

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + +  L GV  + V  G   T 
Sbjct: 4247 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQIPVLAGVVIEDVAVGAEHTL 4302

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L   G V+  GSN+ GQLG G T     P  +  L+   ++ QI+AG  +  A T   V
Sbjct: 4303 ALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQG-KNIRQISAGRCHSAAWTAPPV 4361


>gi|354474338|ref|XP_003499388.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
           [Cricetulus griseus]
          Length = 4859

 Score =  100 bits (249), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 73/235 (31%), Positives = 124/235 (52%), Gaps = 13/235 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           V+SFG G N  LGHG+ +   +P+ I+    +G+ + +V AG +  +AL S+G V
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEAL--QGMFIRKVCAGSQSSLALTSTGQV 635



 Score = 94.0 bits (232), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 124/237 (52%), Gaps = 14/237 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4029 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4087

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4088 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4146

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4147 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4203

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+V
Sbjct: 4204 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHV 4258



 Score = 84.7 bits (208), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 70/225 (31%), Positives = 110/225 (48%), Gaps = 7/225 (3%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 4091 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTS 4149

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHT 239
             G++FT G+      G  +T+     P  V AL+G    QV  GLN T  ++  G  V  
Sbjct: 4150 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 4208

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ +  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 4209 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 4267

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             L  G   +  +P+ I      G+ +  V+ G EH +AL S+G V
Sbjct: 4268 GLPEGRARNHNRPQQIPVL--AGVVIEDVAVGAEHTLALASTGDV 4310



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 78/222 (35%), Positives = 113/222 (50%), Gaps = 15/222 (6%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 298 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             CLG G  +   L+P+ I+        +V +S GD H ++L
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLSL 680



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 110/234 (47%), Gaps = 38/234 (16%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS----AAHVVQVSASENHA 175
           R+   +  +  +++ G    G LGHG   ++       N P+     ++V +VS   +H 
Sbjct: 521 RHSAAVTEDGELYTWGEGDFGRLGHGDSNSR-------NIPTLVKDISNVGEVSCGSSHT 573

Query: 176 AFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             + + G+    F  GDN     GH DTNR +++P+++EAL+G+  ++V AG   +  LT
Sbjct: 574 IALSKDGRTVWSFGGGDNGKL--GHGDTNR-VYKPKVIEALQGMFIRKVCAGSQSSLALT 630

Query: 233 IRGHVHT--------CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             G V+         CGS+    L          PK I  L     +V I+ G S+ L++
Sbjct: 631 STGQVYAWGCGACLGCGSSEATAL---------RPKLIEELAAT-RIVDISIGDSHCLSL 680

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           + +  VY++G+ S    G G     + +P+ +      GI + ++SAG  H +A
Sbjct: 681 SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGL--DGIAIQQISAGTSHSLA 732



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 104/229 (45%), Gaps = 13/229 (5%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ ++ S+  +F+ G+   G LG G  + + +   R+       + QV+   
Sbjct: 4135 VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 4193

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G +   F  GD      G+         P+ V+ L G+  K+V  G  F+ 
Sbjct: 4194 NHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS---SPQKVDVLCGIGIKKVACGTQFSV 4250

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNG 288
             LT  GHV+T G +    L  G   +   P+ I  L   G V++ +A G  + LA+   G
Sbjct: 4251 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVL--AGVVIEDVAVGAEHTLALASTG 4308

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             VY++GS S   LG G  +   +P  +   + K I   ++SAG  H  A
Sbjct: 4309 DVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIR--QISAGRCHSAA 4355



 Score = 60.8 bits (146), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 84/189 (44%), Gaps = 14/189 (7%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSG 342
           H +AL   G
Sbjct: 572 HTIALSKDG 580



 Score = 58.2 bits (139), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 84/175 (48%), Gaps = 7/175 (4%)

Query: 115 QITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++ G  HT+ +S    +V+S G    G LGHG +T +      I       + +V A  
Sbjct: 565 EVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEALQGMFIRKVCAGS 623

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             +  +  +GQV+  G  +   CG  +      RP+L+E L       ++ G +    L+
Sbjct: 624 QSSLALTSTGQVYAWGCGACLGCGSSEAT--ALRPKLIEELAATRIVDISIGDSHCLSLS 681

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
               V+  G+N+ GQ G G++    T PK ++ L+ + ++ QI+AG S+ LA T 
Sbjct: 682 HDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI-AIQQISAGTSHSLAWTA 735



 Score = 57.8 bits (138), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 65/128 (50%), Gaps = 4/128 (3%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 4028 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4087

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H  
Sbjct: 4088 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 4145

Query: 337  ALDSSGYV 344
             + S G +
Sbjct: 4146 VVTSDGKL 4153



 Score = 47.8 bits (112), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 79/180 (43%), Gaps = 11/180 (6%)

Query: 115  QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HTL +S   S V++ G    G LG G  T +  S  +++      + +V+   
Sbjct: 4188 QVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKVDVLCGIGIKKVACGT 4246

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + +  L GV  + V  G   T 
Sbjct: 4247 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQIPVLAGVVIEDVAVGAEHTL 4302

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L   G V+  GSN+ GQLG G T     P  +  L+   ++ QI+AG  +  A T   V
Sbjct: 4303 ALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQG-KNIRQISAGRCHSAAWTAPPV 4361


>gi|109484871|ref|XP_001075834.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Rattus
           norvegicus]
          Length = 4859

 Score =  100 bits (249), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 73/235 (31%), Positives = 124/235 (52%), Gaps = 13/235 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           V+SFG G N  LGHG+ +   +P+ I+    +G+ + +V AG +  +AL S+G V
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEAL--QGMFIRKVCAGSQSSLALTSTGQV 635



 Score = 94.0 bits (232), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 124/237 (52%), Gaps = 14/237 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4029 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4087

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4088 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4146

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4147 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4203

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+V
Sbjct: 4204 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHV 4258



 Score = 84.7 bits (208), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 70/225 (31%), Positives = 110/225 (48%), Gaps = 7/225 (3%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 4091 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTS 4149

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHT 239
             G++FT G+      G  +T+     P  V AL+G    QV  GLN T  ++  G  V  
Sbjct: 4150 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 4208

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ +  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 4209 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 4267

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             L  G   +  +P+ I      G+ +  V+ G EH +AL S+G V
Sbjct: 4268 GLPEGRARNHNRPQQIPVL--AGVVIEDVAVGAEHTLALASTGDV 4310



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 78/222 (35%), Positives = 113/222 (50%), Gaps = 15/222 (6%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 298 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             CLG G  +   L+P+ I+        +V +S GD H ++L
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLSL 680



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 110/234 (47%), Gaps = 38/234 (16%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS----AAHVVQVSASENHA 175
           R+   +  +  +++ G    G LGHG   ++       N P+     ++V +VS   +H 
Sbjct: 521 RHSAAVTEDGELYTWGEGDFGRLGHGDSNSR-------NIPTLVKDISNVGEVSCGSSHT 573

Query: 176 AFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             + + G+    F  GDN     GH DTNR +++P+++EAL+G+  ++V AG   +  LT
Sbjct: 574 IALSKDGRTVWSFGGGDNGKL--GHGDTNR-VYKPKVIEALQGMFIRKVCAGSQSSLALT 630

Query: 233 IRGHVHT--------CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             G V+         CGS+    L          PK I  L     +V I+ G S+ L++
Sbjct: 631 STGQVYAWGCGACLGCGSSEATAL---------RPKLIEELAAT-RIVDISIGDSHCLSL 680

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           + +  VY++G+ S    G G     + +P+ +      GI + ++SAG  H +A
Sbjct: 681 SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGL--DGIAIQQISAGTSHSLA 732



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 104/229 (45%), Gaps = 13/229 (5%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ ++ S+  +F+ G+   G LG G  + + +   R+       + QV+   
Sbjct: 4135 VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 4193

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G +   F  GD      G+         P+ V+ L G+  K+V  G  F+ 
Sbjct: 4194 NHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS---SPQKVDVLCGIGIKKVACGTQFSV 4250

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNG 288
             LT  GHV+T G +    L  G   +   P+ I  L   G V++ +A G  + LA+   G
Sbjct: 4251 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVL--AGVVIEDVAVGAEHTLALASTG 4308

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             VY++GS S   LG G  +   +P  +   + K I   ++SAG  H  A
Sbjct: 4309 DVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIR--QISAGRCHSAA 4355



 Score = 60.8 bits (146), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 84/189 (44%), Gaps = 14/189 (7%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSG 342
           H +AL   G
Sbjct: 572 HTIALSKDG 580



 Score = 58.2 bits (139), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 84/175 (48%), Gaps = 7/175 (4%)

Query: 115 QITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++ G  HT+ +S    +V+S G    G LGHG +T +      I       + +V A  
Sbjct: 565 EVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEALQGMFIRKVCAGS 623

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             +  +  +GQV+  G  +   CG  +      RP+L+E L       ++ G +    L+
Sbjct: 624 QSSLALTSTGQVYAWGCGACLGCGSSEAT--ALRPKLIEELAATRIVDISIGDSHCLSLS 681

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
               V+  G+N+ GQ G G++    T PK ++ L+ + ++ QI+AG S+ LA T 
Sbjct: 682 HDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI-AIQQISAGTSHSLAWTA 735



 Score = 57.8 bits (138), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 65/128 (50%), Gaps = 4/128 (3%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 4028 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4087

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H  
Sbjct: 4088 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 4145

Query: 337  ALDSSGYV 344
             + S G +
Sbjct: 4146 VVTSDGKL 4153



 Score = 47.8 bits (112), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 79/180 (43%), Gaps = 11/180 (6%)

Query: 115  QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HTL +S   S V++ G    G LG G  T +  S  +++      + +V+   
Sbjct: 4188 QVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKVDVLCGIGIKKVACGT 4246

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + +  L GV  + V  G   T 
Sbjct: 4247 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQIPVLAGVVIEDVAVGAEHTL 4302

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L   G V+  GSN+ GQLG G T     P  +  L+   ++ QI+AG  +  A T   V
Sbjct: 4303 ALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQG-KNIRQISAGRCHSAAWTAPPV 4361


>gi|148694174|gb|EDL26121.1| mCG130390 [Mus musculus]
          Length = 4870

 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 73/235 (31%), Positives = 124/235 (52%), Gaps = 13/235 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           V+SFG G N  LGHG+ +   +P+ I+    +G+ + +V AG +  +AL S+G V
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEAL--QGMFIRKVCAGSQSSLALTSTGQV 635



 Score = 94.0 bits (232), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 124/237 (52%), Gaps = 14/237 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4040 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4098

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4099 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4157

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4158 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4214

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+V
Sbjct: 4215 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHV 4269



 Score = 84.7 bits (208), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 70/225 (31%), Positives = 110/225 (48%), Gaps = 7/225 (3%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 4102 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTS 4160

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHT 239
             G++FT G+      G  +T+     P  V AL+G    QV  GLN T  ++  G  V  
Sbjct: 4161 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 4219

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ +  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 4220 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 4278

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             L  G   +  +P+ I      G+ +  V+ G EH +AL S+G V
Sbjct: 4279 GLPEGRARNHNRPQQIPVL--AGVVIEDVAVGAEHTLALASTGDV 4321



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 78/222 (35%), Positives = 113/222 (50%), Gaps = 15/222 (6%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 298 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             CLG G  +   L+P+ I+        +V +S GD H ++L
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLSL 680



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 110/234 (47%), Gaps = 38/234 (16%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS----AAHVVQVSASENHA 175
           R+   +  +  +++ G    G LGHG   ++       N P+     ++V +VS   +H 
Sbjct: 521 RHSAAVTEDGELYTWGEGDFGRLGHGDSNSR-------NIPTLVKDISNVGEVSCGSSHT 573

Query: 176 AFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             + + G+    F  GDN     GH DTNR +++P+++EAL+G+  ++V AG   +  LT
Sbjct: 574 IALSKDGRTVWSFGGGDNGKL--GHGDTNR-VYKPKVIEALQGMFIRKVCAGSQSSLALT 630

Query: 233 IRGHVHT--------CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             G V+         CGS+    L          PK I  L     +V I+ G S+ L++
Sbjct: 631 STGQVYAWGCGACLGCGSSEATAL---------RPKLIEELAAT-RIVDISIGDSHCLSL 680

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           + +  VY++G+ S    G G     + +P+ +      GI + ++SAG  H +A
Sbjct: 681 SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGL--DGIAIQQISAGTSHSLA 732



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 104/229 (45%), Gaps = 13/229 (5%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ ++ S+  +F+ G+   G LG G  + + +   R+       + QV+   
Sbjct: 4146 VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 4204

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G +   F  GD      G+         P+ V+ L G+  K+V  G  F+ 
Sbjct: 4205 NHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS---SPQKVDVLCGIGIKKVACGTQFSV 4261

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNG 288
             LT  GHV+T G +    L  G   +   P+ I  L   G V++ +A G  + LA+   G
Sbjct: 4262 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVL--AGVVIEDVAVGAEHTLALASTG 4319

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             VY++GS S   LG G  +   +P  +   + K I   ++SAG  H  A
Sbjct: 4320 DVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIR--QISAGRCHSAA 4366



 Score = 60.8 bits (146), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 84/189 (44%), Gaps = 14/189 (7%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSG 342
           H +AL   G
Sbjct: 572 HTIALSKDG 580



 Score = 58.2 bits (139), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 84/175 (48%), Gaps = 7/175 (4%)

Query: 115 QITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++ G  HT+ +S    +V+S G    G LGHG +T +      I       + +V A  
Sbjct: 565 EVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEALQGMFIRKVCAGS 623

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             +  +  +GQV+  G  +   CG  +      RP+L+E L       ++ G +    L+
Sbjct: 624 QSSLALTSTGQVYAWGCGACLGCGSSEAT--ALRPKLIEELAATRIVDISIGDSHCLSLS 681

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
               V+  G+N+ GQ G G++    T PK ++ L+ + ++ QI+AG S+ LA T 
Sbjct: 682 HDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI-AIQQISAGTSHSLAWTA 735



 Score = 57.8 bits (138), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 65/128 (50%), Gaps = 4/128 (3%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 4039 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4098

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H  
Sbjct: 4099 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 4156

Query: 337  ALDSSGYV 344
             + S G +
Sbjct: 4157 VVTSDGKL 4164



 Score = 47.8 bits (112), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 79/180 (43%), Gaps = 11/180 (6%)

Query: 115  QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HTL +S   S V++ G    G LG G  T +  S  +++      + +V+   
Sbjct: 4199 QVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKVDVLCGIGIKKVACGT 4257

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + +  L GV  + V  G   T 
Sbjct: 4258 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQIPVLAGVVIEDVAVGAEHTL 4313

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L   G V+  GSN+ GQLG G T     P  +  L+   ++ QI+AG  +  A T   V
Sbjct: 4314 ALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQG-KNIRQISAGRCHSAAWTAPPV 4372


>gi|428173156|gb|EKX42060.1| hypothetical protein GUITHDRAFT_95823 [Guillardia theta CCMP2712]
          Length = 546

 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 102/216 (47%), Gaps = 10/216 (4%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVS--FTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
           V++ G    G LGHG +  + +     RI       V  VSA   H   V   G +FT G
Sbjct: 294 VYTWGQGRYGQLGHGDDVDKIIPQPVPRIK----GEVKSVSAGFYHTVAVTHHGALFTWG 349

Query: 189 DNSSFCCGHRDTNRPIFRPRLVEAL--KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
           D      GH D  + +  P LV A    G+P     AG + T  L  RG V + GS   G
Sbjct: 350 DGKEGKLGHNDNAQRLI-PTLVAAFIEWGMPVAAAQAGGSHTLVLNRRGQVFSFGSGDSG 408

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           +LGHG+  D+ +P  ++ LE     V IAAG ++ +A+T  G +Y++G G    LGHG  
Sbjct: 409 RLGHGNDNDQWSPTFLSALESE-RCVSIAAGFAHSVALTDQGQIYTWGCGKLGRLGHGSD 467

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            DE+ PR +       I  + V+AG+ H     S G
Sbjct: 468 SDEVLPRKLALISHDTIKAIAVAAGEAHTCIFRSEG 503



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/114 (33%), Positives = 61/114 (53%), Gaps = 2/114 (1%)

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           +T  G V+T G   +GQLGHGD +D+  P+ +  ++  G V  ++AG  + +AVT +G +
Sbjct: 288 VTDTGLVYTWGQGRYGQLGHGDDVDKIIPQPVPRIK--GEVKSVSAGFYHTVAVTHHGAL 345

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           +++G G    LGH +    L P  +  F   G+ V    AG  H + L+  G V
Sbjct: 346 FTWGDGKEGKLGHNDNAQRLIPTLVAAFIEWGMPVAAAQAGGSHTLVLNRRGQV 399


>gi|281347310|gb|EFB22894.1| hypothetical protein PANDA_002155 [Ailuropoda melanoleuca]
          Length = 4871

 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/235 (30%), Positives = 124/235 (52%), Gaps = 13/235 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           V+SFG G N  LGHG+ +   +P+ ++    +G+ + +V AG +  +AL S+G V
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVVEAL--QGMFIRKVCAGSQSSLALTSTGQV 635



 Score = 94.4 bits (233), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 124/237 (52%), Gaps = 14/237 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4040 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4098

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4099 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4157

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4158 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4214

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+V
Sbjct: 4215 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHV 4269



 Score = 84.7 bits (208), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 70/225 (31%), Positives = 110/225 (48%), Gaps = 7/225 (3%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 4102 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTS 4160

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHT 239
             G++FT G+      G  +T+     P  V AL+G    QV  GLN T  ++  G  V  
Sbjct: 4161 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 4219

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ +  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 4220 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 4278

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             L  G   +  +P+ I      G+ +  V+ G EH +AL S+G V
Sbjct: 4279 GLPEGRARNHNRPQQIPVL--AGVVIEDVAVGAEHTLALASTGDV 4321



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 78/222 (35%), Positives = 113/222 (50%), Gaps = 15/222 (6%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK +  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVVEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 298 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             CLG G  +   L+P+ I+        +V +S GD H +AL
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLAL 680



 Score = 68.2 bits (165), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 110/234 (47%), Gaps = 38/234 (16%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS----AAHVVQVSASENHA 175
           R+   +  +  +++ G    G LGHG   ++       N P+     ++V +VS   +H 
Sbjct: 521 RHSAAVTEDGELYTWGEGDFGRLGHGDSNSR-------NIPTLVKDISNVGEVSCGSSHT 573

Query: 176 AFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             + + G+    F  GDN     GH DTNR +++P++VEAL+G+  ++V AG   +  LT
Sbjct: 574 IALSKDGRTVWSFGGGDNGKL--GHGDTNR-VYKPKVVEALQGMFIRKVCAGSQSSLALT 630

Query: 233 IRGHVHT--------CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             G V+         CGS+    L          PK I  L     +V I+ G S+ LA+
Sbjct: 631 STGQVYAWGCGACLGCGSSEATAL---------RPKLIEELAAT-RIVDISIGDSHCLAL 680

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           + +  VY++G+ S    G G     + +P+ +      GI + ++SAG  H +A
Sbjct: 681 SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGL--DGIAIQQISAGTSHSLA 732



 Score = 64.3 bits (155), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 105/229 (45%), Gaps = 13/229 (5%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ ++ S+  +F+ G+   G LG G  + + +   R+       + QV+   
Sbjct: 4146 VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 4204

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G +   F  GD      G+         P+ V+ L G+  K+V  G  F+ 
Sbjct: 4205 NHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS---SPQKVDVLCGIGIKKVACGTQFSV 4261

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNG 288
             LT  GHV+T G +    L  G   +   P+ I  L   G V++ +A G  + LA+   G
Sbjct: 4262 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVL--AGVVIEDVAVGAEHTLALASTG 4319

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             VY++GS S   LG G  +   +P  +     +G +V ++SAG  H  A
Sbjct: 4320 DVYAWGSNSEGQLGLGHTNHVREPTLVTVL--QGKNVRQISAGRCHSAA 4366



 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 84/189 (44%), Gaps = 14/189 (7%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSG 342
           H +AL   G
Sbjct: 572 HTIALSKDG 580



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 65/128 (50%), Gaps = 4/128 (3%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 4039 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4098

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H  
Sbjct: 4099 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 4156

Query: 337  ALDSSGYV 344
             + S G +
Sbjct: 4157 VVTSDGKL 4164



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 47/175 (26%), Positives = 84/175 (48%), Gaps = 7/175 (4%)

Query: 115 QITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++ G  HT+ +S    +V+S G    G LGHG +T +      +       + +V A  
Sbjct: 565 EVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVVEALQGMFIRKVCAGS 623

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             +  +  +GQV+  G  +   CG  +      RP+L+E L       ++ G +    L+
Sbjct: 624 QSSLALTSTGQVYAWGCGACLGCGSSEAT--ALRPKLIEELAATRIVDISIGDSHCLALS 681

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
               V+  G+N+ GQ G G++    T PK ++ L+ + ++ QI+AG S+ LA T 
Sbjct: 682 HDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI-AIQQISAGTSHSLAWTA 735



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 79/180 (43%), Gaps = 11/180 (6%)

Query: 115  QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HTL +S   S V++ G    G LG G  T +  S  +++      + +V+   
Sbjct: 4199 QVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKVDVLCGIGIKKVACGT 4257

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + +  L GV  + V  G   T 
Sbjct: 4258 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQIPVLAGVVIEDVAVGAEHTL 4313

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L   G V+  GSN+ GQLG G T     P  +  L+   +V QI+AG  +  A T   V
Sbjct: 4314 ALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQG-KNVRQISAGRCHSAAWTAPPV 4372


>gi|301756863|ref|XP_002914279.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
           [Ailuropoda melanoleuca]
          Length = 4861

 Score =  100 bits (248), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/235 (30%), Positives = 124/235 (52%), Gaps = 13/235 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           V+SFG G N  LGHG+ +   +P+ ++    +G+ + +V AG +  +AL S+G V
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVVEAL--QGMFIRKVCAGSQSSLALTSTGQV 635



 Score = 94.4 bits (233), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 124/237 (52%), Gaps = 14/237 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4089

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4090 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4148

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4149 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4205

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+V
Sbjct: 4206 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHV 4260



 Score = 84.7 bits (208), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 70/225 (31%), Positives = 110/225 (48%), Gaps = 7/225 (3%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 4093 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTS 4151

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHT 239
             G++FT G+      G  +T+     P  V AL+G    QV  GLN T  ++  G  V  
Sbjct: 4152 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 4210

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ +  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 4211 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 4269

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             L  G   +  +P+ I      G+ +  V+ G EH +AL S+G V
Sbjct: 4270 GLPEGRARNHNRPQQIPVL--AGVVIEDVAVGAEHTLALASTGDV 4312



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 78/222 (35%), Positives = 113/222 (50%), Gaps = 15/222 (6%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK +  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVVEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 298 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             CLG G  +   L+P+ I+        +V +S GD H +AL
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLAL 680



 Score = 68.2 bits (165), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 110/234 (47%), Gaps = 38/234 (16%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS----AAHVVQVSASENHA 175
           R+   +  +  +++ G    G LGHG   ++       N P+     ++V +VS   +H 
Sbjct: 521 RHSAAVTEDGELYTWGEGDFGRLGHGDSNSR-------NIPTLVKDISNVGEVSCGSSHT 573

Query: 176 AFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             + + G+    F  GDN     GH DTNR +++P++VEAL+G+  ++V AG   +  LT
Sbjct: 574 IALSKDGRTVWSFGGGDNGKL--GHGDTNR-VYKPKVVEALQGMFIRKVCAGSQSSLALT 630

Query: 233 IRGHVHT--------CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             G V+         CGS+    L          PK I  L     +V I+ G S+ LA+
Sbjct: 631 STGQVYAWGCGACLGCGSSEATAL---------RPKLIEELAAT-RIVDISIGDSHCLAL 680

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           + +  VY++G+ S    G G     + +P+ +      GI + ++SAG  H +A
Sbjct: 681 SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGL--DGIAIQQISAGTSHSLA 732



 Score = 64.3 bits (155), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 105/229 (45%), Gaps = 13/229 (5%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ ++ S+  +F+ G+   G LG G  + + +   R+       + QV+   
Sbjct: 4137 VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 4195

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G +   F  GD      G+         P+ V+ L G+  K+V  G  F+ 
Sbjct: 4196 NHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS---SPQKVDVLCGIGIKKVACGTQFSV 4252

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNG 288
             LT  GHV+T G +    L  G   +   P+ I  L   G V++ +A G  + LA+   G
Sbjct: 4253 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVL--AGVVIEDVAVGAEHTLALASTG 4310

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             VY++GS S   LG G  +   +P  +     +G +V ++SAG  H  A
Sbjct: 4311 DVYAWGSNSEGQLGLGHTNHVREPTLVTVL--QGKNVRQISAGRCHSAA 4357



 Score = 61.2 bits (147), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 84/189 (44%), Gaps = 14/189 (7%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSG 342
           H +AL   G
Sbjct: 572 HTIALSKDG 580



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 65/128 (50%), Gaps = 4/128 (3%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 4030 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4089

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H  
Sbjct: 4090 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 4147

Query: 337  ALDSSGYV 344
             + S G +
Sbjct: 4148 VVTSDGKL 4155



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 47/175 (26%), Positives = 84/175 (48%), Gaps = 7/175 (4%)

Query: 115 QITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++ G  HT+ +S    +V+S G    G LGHG +T +      +       + +V A  
Sbjct: 565 EVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVVEALQGMFIRKVCAGS 623

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             +  +  +GQV+  G  +   CG  +      RP+L+E L       ++ G +    L+
Sbjct: 624 QSSLALTSTGQVYAWGCGACLGCGSSEAT--ALRPKLIEELAATRIVDISIGDSHCLALS 681

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
               V+  G+N+ GQ G G++    T PK ++ L+ + ++ QI+AG S+ LA T 
Sbjct: 682 HDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI-AIQQISAGTSHSLAWTA 735



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 79/180 (43%), Gaps = 11/180 (6%)

Query: 115  QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HTL +S   S V++ G    G LG G  T +  S  +++      + +V+   
Sbjct: 4190 QVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKVDVLCGIGIKKVACGT 4248

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + +  L GV  + V  G   T 
Sbjct: 4249 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQIPVLAGVVIEDVAVGAEHTL 4304

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L   G V+  GSN+ GQLG G T     P  +  L+   +V QI+AG  +  A T   V
Sbjct: 4305 ALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQG-KNVRQISAGRCHSAAWTAPPV 4363


>gi|410961060|ref|XP_003987103.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC1 [Felis catus]
          Length = 4861

 Score =  100 bits (248), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/235 (30%), Positives = 124/235 (52%), Gaps = 13/235 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           V+SFG G N  LGHG+ +   +P+ ++    +G+ + +V AG +  +AL S+G V
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVVEAL--QGMFIRKVCAGSQSSLALTSTGQV 635



 Score = 94.4 bits (233), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 124/237 (52%), Gaps = 14/237 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4089

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4090 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4148

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4149 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4205

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+V
Sbjct: 4206 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHV 4260



 Score = 84.7 bits (208), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 70/225 (31%), Positives = 110/225 (48%), Gaps = 7/225 (3%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 4093 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTS 4151

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHT 239
             G++FT G+      G  +T+     P  V AL+G    QV  GLN T  ++  G  V  
Sbjct: 4152 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 4210

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ +  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 4211 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 4269

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             L  G   +  +P+ I      G+ +  V+ G EH +AL S+G V
Sbjct: 4270 GLPEGRARNHNRPQQIPVL--AGVVIEDVAVGAEHTLALASTGDV 4312



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 78/222 (35%), Positives = 113/222 (50%), Gaps = 15/222 (6%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK +  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVVEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 298 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             CLG G  +   L+P+ I+        +V +S GD H +AL
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLAL 680



 Score = 68.2 bits (165), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 110/234 (47%), Gaps = 38/234 (16%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS----AAHVVQVSASENHA 175
           R+   +  +  +++ G    G LGHG   ++       N P+     ++V +VS   +H 
Sbjct: 521 RHSAAVTEDGELYTWGEGDFGRLGHGDSNSR-------NIPTLVKDISNVGEVSCGSSHT 573

Query: 176 AFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             + + G+    F  GDN     GH DTNR +++P++VEAL+G+  ++V AG   +  LT
Sbjct: 574 IALSKDGRTVWSFGGGDNGKL--GHGDTNR-VYKPKVVEALQGMFIRKVCAGSQSSLALT 630

Query: 233 IRGHVHT--------CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             G V+         CGS+    L          PK I  L     +V I+ G S+ LA+
Sbjct: 631 STGQVYAWGCGACLGCGSSEATAL---------RPKLIEELAAT-RIVDISIGDSHCLAL 680

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           + +  VY++G+ S    G G     + +P+ +      GI + ++SAG  H +A
Sbjct: 681 SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGL--DGIAIQQISAGTSHSLA 732



 Score = 63.9 bits (154), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 105/229 (45%), Gaps = 13/229 (5%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ ++ S+  +F+ G+   G LG G  + + +   R+       + QV+   
Sbjct: 4137 VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 4195

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G +   F  GD      G+         P+ V+ L G+  K+V  G  F+ 
Sbjct: 4196 NHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS---SPQKVDVLCGIGIKKVACGTQFSV 4252

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNG 288
             LT  GHV+T G +    L  G   +   P+ I  L   G V++ +A G  + LA+   G
Sbjct: 4253 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVL--AGVVIEDVAVGAEHTLALASTG 4310

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             VY++GS S   LG G  +   +P  +     +G +V ++SAG  H  A
Sbjct: 4311 DVYAWGSNSEGQLGLGHTNHVREPTLVTVL--QGKNVRQISAGRCHSAA 4357



 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 72/254 (28%), Positives = 108/254 (42%), Gaps = 20/254 (7%)

Query: 96  FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSF 154
           F +    +SD   T A    I TG   T ++S +  V+  GS+    L  G   TQ    
Sbjct: 340 FEEVCRMASDYSRTCASPDSIQTG--DTPIVSETCEVYVWGSNSSHQLVEG---TQEKIL 394

Query: 155 TRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPR 208
                PS +    + A +     +   G V  CG  S    G  D+N      +  F P 
Sbjct: 395 QPKLAPSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH 454

Query: 209 LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 268
              ++K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    + 
Sbjct: 455 --RSIKKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQG 510

Query: 269 GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 328
             VV ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  V
Sbjct: 511 KVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEV 566

Query: 329 SAGDEHVVALDSSG 342
           S G  H +AL   G
Sbjct: 567 SCGSSHTIALSKDG 580



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 65/128 (50%), Gaps = 4/128 (3%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 4030 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4089

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H  
Sbjct: 4090 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 4147

Query: 337  ALDSSGYV 344
             + S G +
Sbjct: 4148 VVTSDGKL 4155



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 47/175 (26%), Positives = 84/175 (48%), Gaps = 7/175 (4%)

Query: 115 QITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++ G  HT+ +S    +V+S G    G LGHG +T +      +       + +V A  
Sbjct: 565 EVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVVEALQGMFIRKVCAGS 623

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             +  +  +GQV+  G  +   CG  +      RP+L+E L       ++ G +    L+
Sbjct: 624 QSSLALTSTGQVYAWGCGACLGCGSSEAT--ALRPKLIEELAATRIVDISIGDSHCLALS 681

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
               V+  G+N+ GQ G G++    T PK ++ L+ + ++ QI+AG S+ LA T 
Sbjct: 682 HDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI-AIQQISAGTSHSLAWTA 735



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 79/180 (43%), Gaps = 11/180 (6%)

Query: 115  QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HTL +S   S V++ G    G LG G  T +  S  +++      + +V+   
Sbjct: 4190 QVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKVDVLCGIGIKKVACGT 4248

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + +  L GV  + V  G   T 
Sbjct: 4249 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQIPVLAGVVIEDVAVGAEHTL 4304

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L   G V+  GSN+ GQLG G T     P  +  L+   +V QI+AG  +  A T   V
Sbjct: 4305 ALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQG-KNVRQISAGRCHSAAWTAPPV 4363


>gi|224118330|ref|XP_002317792.1| predicted protein [Populus trichocarpa]
 gi|222858465|gb|EEE96012.1| predicted protein [Populus trichocarpa]
          Length = 337

 Score =  100 bits (248), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 131/279 (46%), Gaps = 17/279 (6%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCAL 67
           F +   PS ++  +LT+  L   DLA LE T+          P    S+ +LAA  +C  
Sbjct: 50  FPLATNPS-IVLHVLTACNLDPQDLAKLEATN--------FPPDNELSISELAALDMCQK 100

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLI- 126
            +I+  M+   + +L  RC G+WK VLRFL + E       +     Q   G  H++ + 
Sbjct: 101 RAIFKPMAPEERQDLKQRCGGSWKLVLRFLLAGEACCRRERS-----QAIAGPGHSIAVT 155

Query: 127 SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 186
           SN +V+S GS+  G LGHG  T +     +I       ++Q +A       +  +G+V+ 
Sbjct: 156 SNGAVYSFGSNSSGQLGHG-TTEEEWRPRQIRSLRGIRIIQAAAGPGRTMLISDAGRVYA 214

Query: 187 CGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH 245
            G +S     +    ++ +  P+LVE+LK +   Q   G  FT  L+  G V+T      
Sbjct: 215 FGKDSFGEAEYGAQGSKMVTTPQLVESLKNIFVVQAVIGNFFTAVLSREGRVYTFSWGND 274

Query: 246 GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
           G++GH    +   P  +    E   VVQIAAG  Y+LA+
Sbjct: 275 GRIGHQTEPNDVEPHPLLGALENIPVVQIAAGYCYLLAL 313



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/174 (28%), Positives = 90/174 (51%), Gaps = 5/174 (2%)

Query: 167 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
           Q  A   H+  V  +G V++ G NSS   GH  T    +RPR + +L+G+   Q  AG  
Sbjct: 143 QAIAGPGHSIAVTSNGAVYSFGSNSSGQLGHGTTEEE-WRPRQIRSLRGIRIIQAAAGPG 201

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDR--PTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
            T  ++  G V+  G ++ G+  +G    +   TP+ +  L+ +  VVQ   G  +   +
Sbjct: 202 RTMLISDAGRVYAFGKDSFGEAEYGAQGSKMVTTPQLVESLKNI-FVVQAVIGNFFTAVL 260

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           +  G VY+F  G++  +GH  + ++++P  +     + I VV+++AG  +++AL
Sbjct: 261 SREGRVYTFSWGNDGRIGHQTEPNDVEPHPLLG-ALENIPVVQIAAGYCYLLAL 313



 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 31/72 (43%), Positives = 45/72 (62%), Gaps = 2/72 (2%)

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
           Q  AGP + +AVT NG VYSFGS S+  LGHG   +E +PR I++ R  GI +++ +AG 
Sbjct: 143 QAIAGPGHSIAVTSNGAVYSFGSNSSGQLGHGTTEEEWRPRQIRSLR--GIRIIQAAAGP 200

Query: 333 EHVVALDSSGYV 344
              + +  +G V
Sbjct: 201 GRTMLISDAGRV 212


>gi|242008674|ref|XP_002425127.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
 gi|212508801|gb|EEB12389.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
          Length = 1044

 Score =  100 bits (248), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 111/216 (51%), Gaps = 9/216 (4%)

Query: 131 VFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 189
           ++  GS++ G LG G  E  Q  +     F  A++V QV+  ENH   + +SG+VF+CG+
Sbjct: 1   MYCWGSTVHGELGLGGIEHDQIFAPIEHTFKYASNVSQVTMGENHTVMLTKSGEVFSCGN 60

Query: 190 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
           N     GH+       +P  VE L      +++ G N T      G +   GS++HGQLG
Sbjct: 61  NDLDQLGHKKQRT---KPEKVEGLDFYRITKISCGGNHTLAFNEWGQLFGWGSDSHGQLG 117

Query: 250 HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD- 308
              T  +P PK I  L     +VQI+ G ++ LA+T NG +YS+G   +  LG G + + 
Sbjct: 118 FNGT-TQPLPKIIKSLATF-HIVQISCGKNHSLALTNNGELYSWGGNYDGQLGLGMRSEY 175

Query: 309 ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           E QP  I++    GI +  ++ G  H  AL  SG +
Sbjct: 176 EKQPTLIKSLL--GIPIAFIACGSNHSFALSKSGAI 209



 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 73/273 (26%), Positives = 120/273 (43%), Gaps = 52/273 (19%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-----PETTQCVSFTRIN---------- 158
           Q+T G  HT++++ S  VFSCG++    LGH      PE  + + F RI           
Sbjct: 38  QVTMGENHTVMLTKSGEVFSCGNNDLDQLGHKKQRTKPEKVEGLDFYRITKISCGGNHTL 97

Query: 159 ---------------------------FP------SAAHVVQVSASENHAAFVLQSGQVF 185
                                       P      +  H+VQ+S  +NH+  +  +G+++
Sbjct: 98  AFNEWGQLFGWGSDSHGQLGFNGTTQPLPKIIKSLATFHIVQISCGKNHSLALTNNGELY 157

Query: 186 TCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH 245
           + G N     G    +    +P L+++L G+P   +  G N +  L+  G ++  G NT+
Sbjct: 158 SWGGNYDGQLGLGMRSEYEKQPTLIKSLLGIPIAFIACGSNHSFALSKSGAIYGWGKNTY 217

Query: 246 GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
           GQLG  D  ++  P  +  L  +  V  IA G  +   ++ +G V++ G+G    LGHG 
Sbjct: 218 GQLGLNDEENKLHPTQLKTLRSI-RVKYIACGEDFSAFLSADGGVFTCGAGMYGQLGHGS 276

Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             +E+ PR I      G  V +VS G  H +AL
Sbjct: 277 TSNEILPRKIMELM--GSTVTQVSCGKRHTLAL 307



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/183 (31%), Positives = 94/183 (51%), Gaps = 6/183 (3%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QI+ G+ H+L L +N  ++S G +  G LG G  +      T I       +  ++   
Sbjct: 138 VQISCGKNHSLALTNNGELYSWGGNYDGQLGLGMRSEYEKQPTLIKSLLGIPIAFIACGS 197

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           NH+  + +SG ++  G N+    G  D    +  P  ++ L+ +  K +  G +F+ FL+
Sbjct: 198 NHSFALSKSGAIYGWGKNTYGQLGLNDEENKL-HPTQLKTLRSIRVKYIACGEDFSAFLS 256

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGNGVV 290
             G V TCG+  +GQLGHG T +   P+ I  +E +GS V Q++ G  + LA V   G V
Sbjct: 257 ADGGVFTCGAGMYGQLGHGSTSNEILPRKI--MELMGSTVTQVSCGKRHTLALVPSRGRV 314

Query: 291 YSF 293
           YSF
Sbjct: 315 YSF 317


>gi|312373149|gb|EFR20956.1| hypothetical protein AND_18231 [Anopheles darlingi]
          Length = 1270

 Score =  100 bits (248), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 69/225 (30%), Positives = 113/225 (50%), Gaps = 4/225 (1%)

Query: 115 QITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q   G  H+L ++N   V+S GS+  G LG   +TT+ +    I   +A  VVQ++A   
Sbjct: 404 QACCGTAHSLALTNWGQVYSWGSNAVGQLGQETDTTRQIIPRLIRSIAAKQVVQIAAGHY 463

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H   +  SG+++  G N+    G   TN  +  P LV++L GVP   +  G N +  ++ 
Sbjct: 464 HCLALTNSGELYAWGSNAYGQLGLGMTNEKVSTPTLVQSLAGVPIAFIACGGNHSFAVSK 523

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G +   G NT GQLG  D   R  P  +  L  +G V  ++ G  + + +T  G V++ 
Sbjct: 524 SGAIFGWGKNTFGQLGLNDLNSRQFPTQLRTLRSLG-VRYVSCGDDFSVFLTAGGGVFTC 582

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           G+G+   LGHG  ++E+ PR +  F   G  + +++ G  H +A 
Sbjct: 583 GAGTFGQLGHGSCNNEILPRMV--FELMGSKITQIACGRRHTLAF 625



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 62/184 (33%), Positives = 95/184 (51%), Gaps = 6/184 (3%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QI  G YH L ++NS  +++ GS+  G LG G    +  + T +   +   +  ++   
Sbjct: 456 VQIAAGHYHCLALTNSGELYAWGSNAYGQLGLGMTNEKVSTPTLVQSLAGVPIAFIACGG 515

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           NH+  V +SG +F  G N+    G  D N   F P  +  L+ +  + V+ G +F+ FLT
Sbjct: 516 NHSFAVSKSGAIFGWGKNTFGQLGLNDLNSRQF-PTQLRTLRSLGVRYVSCGDDFSVFLT 574

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGNGVV 290
             G V TCG+ T GQLGHG   +   P+ +   E +GS + QIA G  + LA V   G +
Sbjct: 575 AGGGVFTCGAGTFGQLGHGSCNNEILPRMV--FELMGSKITQIACGRRHTLAFVPSRGKI 632

Query: 291 YSFG 294
           Y FG
Sbjct: 633 YGFG 636



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 70/232 (30%), Positives = 110/232 (47%), Gaps = 7/232 (3%)

Query: 119 GRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 177
           G  HTLL++N   ++SCG++  G LGH  E+        +       + Q      H+  
Sbjct: 355 GASHTLLLTNDGKMYSCGNNDHGQLGHDVESLPNKRPQLLTALENYIITQACCGTAHSLA 414

Query: 178 VLQSGQVFTCGDNSSFCCGHR-DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
           +   GQV++ G N+    G   DT R I  PRL+ ++      Q+ AG      LT  G 
Sbjct: 415 LTNWGQVYSWGSNAVGQLGQETDTTRQII-PRLIRSIAAKQVVQIAAGHYHCLALTNSGE 473

Query: 237 VHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
           ++  GSN +GQLG G T ++  TP  +  L  V  +  IA G ++  AV+ +G ++ +G 
Sbjct: 474 LYAWGSNAYGQLGLGMTNEKVSTPTLVQSLAGV-PIAFIACGGNHSFAVSKSGAIFGWGK 532

Query: 296 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSLC 347
            +   LG  + +    P  ++T R  G+    VS GD+  V L + G V  C
Sbjct: 533 NTFGQLGLNDLNSRQFPTQLRTLRSLGVRY--VSCGDDFSVFLTAGGGVFTC 582



 Score = 81.6 bits (200), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 56/191 (29%), Positives = 99/191 (51%), Gaps = 5/191 (2%)

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           ++++  A  + + +   +H   +   G++++CG+N     GH   + P  RP+L+ AL+ 
Sbjct: 340 KMDWMHAKEIARAACGASHTLLLTNDGKMYSCGNNDHGQLGHDVESLPNKRPQLLTALEN 399

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQI 274
               Q   G   +  LT  G V++ GSN  GQLG   DT  +  P+ I  +     VVQI
Sbjct: 400 YIITQACCGTAHSLALTNWGQVYSWGSNAVGQLGQETDTTRQIIPRLIRSI-AAKQVVQI 458

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDE 333
           AAG  + LA+T +G +Y++GS +   LG G  ++++  P  +Q+    G+ +  ++ G  
Sbjct: 459 AAGHYHCLALTNSGELYAWGSNAYGQLGLGMTNEKVSTPTLVQSL--AGVPIAFIACGGN 516

Query: 334 HVVALDSSGYV 344
           H  A+  SG +
Sbjct: 517 HSFAVSKSGAI 527



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/141 (32%), Positives = 76/141 (53%), Gaps = 5/141 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSI 262
           +  PR ++ +      +   G + T  LT  G +++CG+N HGQLGH  ++L    P+ +
Sbjct: 335 VMVPRKMDWMHAKEIARAACGASHTLLLTNDGKMYSCGNNDHGQLGHDVESLPNKRPQLL 394

Query: 263 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRK 321
             LE    + Q   G ++ LA+T  G VYS+GS +   LG   +   ++ PR I++   K
Sbjct: 395 TALENY-IITQACCGTAHSLALTNWGQVYSWGSNAVGQLGQETDTTRQIIPRLIRSIAAK 453

Query: 322 GIHVVRVSAGDEHVVALDSSG 342
              VV+++AG  H +AL +SG
Sbjct: 454 --QVVQIAAGHYHCLALTNSG 472



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 68/149 (45%), Gaps = 4/149 (2%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G  H+  +S S ++F  G +  G LG     ++    T++    +  V  VS  ++ 
Sbjct: 511 IACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLNSRQFP-TQLRTLRSLGVRYVSCGDDF 569

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFLTI 233
           + F+   G VFTCG  +    GH   N  I  PR+V  L G    Q+  G   T  F+  
Sbjct: 570 SVFLTAGGGVFTCGAGTFGQLGHGSCNNEIL-PRMVFELMGSKITQIACGRRHTLAFVPS 628

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           RG ++  G +  GQLG G   +  TP+ +
Sbjct: 629 RGKIYGFGLSGVGQLGIGIVGNYNTPQIV 657


>gi|224061683|ref|XP_002192615.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Taeniopygia
           guttata]
          Length = 4864

 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 73/235 (31%), Positives = 124/235 (52%), Gaps = 13/235 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIINVG---EVSCGSSHTIALSKDGRT 582

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           V+SFG G N  LGHG+ +   +P+ I+    +G+ + +V AG +  +AL S+G V
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEAL--QGMFIRKVCAGSQSSLALTSTGQV 635



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 73/237 (30%), Positives = 124/237 (52%), Gaps = 14/237 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4034 QVVCGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4092

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4093 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4151

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ +AV+ +G
Sbjct: 4152 VTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTVAVSTDG 4208

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+V
Sbjct: 4209 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDIL--CGIGIKKVACGTQFSVALTKDGHV 4263



 Score = 84.7 bits (208), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 68/225 (30%), Positives = 110/225 (48%), Gaps = 7/225 (3%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 4096 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTA 4154

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHT 239
             G++FT G+      G  +T+     P  V AL+G    QV  GLN T  ++  G  V  
Sbjct: 4155 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTVAVSTDGSMVWA 4213

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ +  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 4214 FGDGDYGKLGLGNSTAKSSPQKVDILCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 4272

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             L  G   +  +P+ +      G+ +  ++ G EH +AL S+G V
Sbjct: 4273 GLPEGRARNHNRPQQVPLL--AGVFIEDIAVGAEHTLALSSTGDV 4315



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 79/222 (35%), Positives = 113/222 (50%), Gaps = 15/222 (6%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDIINV--GEVSCGSSHTIALSKDGRTV 583

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 298 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             CLG G  +   L+P+ I+        +V +S GD H +AL
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLAL 680



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 109/234 (46%), Gaps = 38/234 (16%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA----HVVQVSASENHA 175
           R+   +  +  +++ G    G LGHG   ++       N P+      +V +VS   +H 
Sbjct: 521 RHSAAVTEDGELYTWGEGDFGRLGHGDSNSR-------NIPTLVKDIINVGEVSCGSSHT 573

Query: 176 AFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             + + G+    F  GDN     GH DTNR +++P+++EAL+G+  ++V AG   +  LT
Sbjct: 574 IALSKDGRTVWSFGGGDNGKL--GHGDTNR-VYKPKVIEALQGMFIRKVCAGSQSSLALT 630

Query: 233 IRGHVHT--------CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             G V+         CGS+    L          PK I  L     +V I+ G S+ LA+
Sbjct: 631 STGQVYAWGCGACLGCGSSEATAL---------RPKLIEELAAT-RIVDISIGDSHCLAL 680

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           + +  VY++G+ S    G G     + +P+ +      GI + ++SAG  H +A
Sbjct: 681 SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVGGL--DGIAIQQISAGTSHSLA 732



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 104/228 (45%), Gaps = 11/228 (4%)

Query: 114  MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ +++ +  +F+ G+   G LG G  + + +   R+       + QV+   
Sbjct: 4140 VQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 4198

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G +   F  GD      G+         P+ V+ L G+  K+V  G  F+ 
Sbjct: 4199 NHTVAVSTDGSMVWAFGDGDYGKLGLGNSTAKS---SPQKVDILCGIGIKKVACGTQFSV 4255

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             LT  GHV+T G +    L  G   +   P+ + PL     +  IA G  + LA++  G 
Sbjct: 4256 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQV-PLLAGVFIEDIAVGAEHTLALSSTGD 4314

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            VY++GS S   LG G  +   +P  +     +G +V ++SAG  H  A
Sbjct: 4315 VYAWGSNSEGQLGLGHTNHVREPTLVTVL--QGKNVRQISAGRCHSAA 4360



 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 66/130 (50%), Gaps = 4/130 (3%)

Query: 217  PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQI 274
            P +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V  
Sbjct: 4031 PAQQVVCGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTS 4090

Query: 275  AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 334
                 + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H
Sbjct: 4091 CGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKH 4148

Query: 335  VVALDSSGYV 344
               + + G +
Sbjct: 4149 SAVVTADGKL 4158



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 83/175 (47%), Gaps = 7/175 (4%)

Query: 115 QITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++ G  HT+ +S    +V+S G    G LGHG +T +      I       + +V A  
Sbjct: 565 EVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEALQGMFIRKVCAGS 623

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             +  +  +GQV+  G  +   CG  +      RP+L+E L       ++ G +    L+
Sbjct: 624 QSSLALTSTGQVYAWGCGACLGCGSSEAT--ALRPKLIEELAATRIVDISIGDSHCLALS 681

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
               V+  G+N+ GQ G G++    T PK +  L+ + ++ QI+AG S+ LA T 
Sbjct: 682 HDNEVYAWGNNSMGQCGQGNSTGPITKPKKVGGLDGI-AIQQISAGTSHSLAWTA 735



 Score = 47.4 bits (111), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 60/217 (27%), Positives = 95/217 (43%), Gaps = 16/217 (7%)

Query: 115  QITTGRYHTLLISN--SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HT+ +S   S V++ G    G LG G  T +  S  +++      + +V+   
Sbjct: 4193 QVACGLNHTVAVSTDGSMVWAFGDGDYGKLGLGNSTAKS-SPQKVDILCGIGIKKVACGT 4251

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + V  L GV  + +  G   T 
Sbjct: 4252 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQVPLLAGVFIEDIAVGAEHTL 4307

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L+  G V+  GSN+ GQLG G T     P  +  L+   +V QI+AG  +  A T   V
Sbjct: 4308 ALSSTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQG-KNVRQISAGRCHSAAWTAPPV 4366

Query: 290  -VYSFGSGSNFCLGHGE----QHDELQPRAIQTFRRK 321
               + G      LG  +    Q+  L+  +IQT R +
Sbjct: 4367 PPRAPGVSVPLQLGLPDVIPPQYGALKEVSIQTVRAR 4403


>gi|395502621|ref|XP_003755677.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Sarcophilus
           harrisii]
          Length = 4865

 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 72/235 (30%), Positives = 124/235 (52%), Gaps = 13/235 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           ++  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VSEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           V+SFG G N  LGHG+ +   +P+ I+    +G+ + +V AG +  +AL S+G V
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEAL--QGMFIRKVCAGSQSSLALTSTGQV 635



 Score = 94.4 bits (233), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 124/237 (52%), Gaps = 14/237 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4035 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4093

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4094 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVIQMSCGFKHSAV 4152

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4153 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4209

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+V
Sbjct: 4210 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHV 4264



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 69/225 (30%), Positives = 110/225 (48%), Gaps = 7/225 (3%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       V+Q+S    H+A V  
Sbjct: 4097 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVIQMSCGFKHSAVVTS 4155

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHT 239
             G++FT G+      G  +T+     P  V AL+G    QV  GLN T  ++  G  V  
Sbjct: 4156 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 4214

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ +  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 4215 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 4273

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             L  G   +  +P+ I      G+ +  V+ G EH +AL S+G V
Sbjct: 4274 GLPEGRARNHNRPQQIPVL--AGVVIEDVAVGAEHTLALASTGDV 4316



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 79/222 (35%), Positives = 113/222 (50%), Gaps = 15/222 (6%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVS 527

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 298 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             CLG G  +   L+P+ I+        +V +S GD H +AL
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLAL 680



 Score = 67.8 bits (164), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 65/239 (27%), Positives = 114/239 (47%), Gaps = 39/239 (16%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS----AAHVVQVSA 170
           ++ G  H+  +S +  +++ G    G LGHG   ++       N P+     ++V +VS 
Sbjct: 516 VSAGYRHSAAVSEDGELYTWGEGDFGRLGHGDSNSR-------NIPTLVKDISNVGEVSC 568

Query: 171 SENHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
             +H   + + G+    F  GDN     GH DTNR +++P+++EAL+G+  ++V AG   
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKL--GHGDTNR-VYKPKVIEALQGMFIRKVCAGSQS 625

Query: 228 TGFLTIRGHVHT--------CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
           +  LT  G V+         CGS+    L          PK I  L     +V I+ G S
Sbjct: 626 SLALTSTGQVYAWGCGACLGCGSSEATAL---------RPKLIEELAAT-RIVDISIGDS 675

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           + LA++ +  VY++G+ S    G G     + +P+ +      G+ + ++SAG  H +A
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGL--DGVAIQQISAGTSHSLA 732



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/233 (28%), Positives = 106/233 (45%), Gaps = 13/233 (5%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ ++ S+  +F+ G+   G LG G  + + +   R+       + QV+   
Sbjct: 4141 IQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 4199

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G +   F  GD      G+         P+ V+ L G+  K+V  G  F+ 
Sbjct: 4200 NHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS---SPQKVDVLCGIGIKKVACGTQFSV 4256

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNG 288
             LT  GHV+T G +    L  G   +   P+ I  L   G V++ +A G  + LA+   G
Sbjct: 4257 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVL--AGVVIEDVAVGAEHTLALASTG 4314

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
             VY++GS S   LG G  +   +P  I   + K I   ++SAG  H  A  +S
Sbjct: 4315 DVYAWGSNSEGQLGLGHTNHVREPTLITVLQGKNIR--QISAGRCHSAAWTAS 4365



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/189 (28%), Positives = 84/189 (44%), Gaps = 14/189 (7%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AV+ +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVSEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSG 342
           H +AL   G
Sbjct: 572 HTIALSKDG 580



 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 84/175 (48%), Gaps = 7/175 (4%)

Query: 115 QITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++ G  HT+ +S    +V+S G    G LGHG +T +      I       + +V A  
Sbjct: 565 EVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEALQGMFIRKVCAGS 623

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             +  +  +GQV+  G  +   CG  +      RP+L+E L       ++ G +    L+
Sbjct: 624 QSSLALTSTGQVYAWGCGACLGCGSSEAT--ALRPKLIEELAATRIVDISIGDSHCLALS 681

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
               V+  G+N+ GQ G G++    T PK ++ L+ V ++ QI+AG S+ LA T 
Sbjct: 682 HDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGV-AIQQISAGTSHSLAWTA 735



 Score = 57.8 bits (138), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 65/128 (50%), Gaps = 4/128 (3%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 4034 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4093

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  V+++S G +H  
Sbjct: 4094 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVIQMSCGFKHSA 4151

Query: 337  ALDSSGYV 344
             + S G +
Sbjct: 4152 VVTSDGKL 4159



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 80/180 (44%), Gaps = 11/180 (6%)

Query: 115  QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HTL +S   S V++ G    G LG G  T +  S  +++      + +V+   
Sbjct: 4194 QVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKVDVLCGIGIKKVACGT 4252

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + +  L GV  + V  G   T 
Sbjct: 4253 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQIPVLAGVVIEDVAVGAEHTL 4308

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L   G V+  GSN+ GQLG G T     P  I  L+   ++ QI+AG  +  A T + V
Sbjct: 4309 ALASTGDVYAWGSNSEGQLGLGHTNHVREPTLITVLQG-KNIRQISAGRCHSAAWTASPV 4367


>gi|301610125|ref|XP_002934599.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Xenopus
           (Silurana) tropicalis]
          Length = 4842

 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 72/235 (30%), Positives = 123/235 (52%), Gaps = 13/235 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE-ALKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGTLQGKVVVCVSAGYRHSAA 525

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           V+SFG G N  LGHG+ +   +P+ ++    +G+   +V AG +  +AL S+G V
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVVEAL--QGMFTRKVCAGSQSSLALTSTGQV 635



 Score = 95.1 bits (235), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 73/235 (31%), Positives = 123/235 (52%), Gaps = 10/235 (4%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4012 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4070

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4071 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4129

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
            +T  G + T G+  +G+LG G+T ++  P+ +  LE +  + Q+A G ++ LAV+ +G +
Sbjct: 4130 VTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGL-HIGQVACGLNHTLAVSADGSL 4188

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+V
Sbjct: 4189 VWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHV 4241



 Score = 85.1 bits (209), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 69/225 (30%), Positives = 111/225 (49%), Gaps = 7/225 (3%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 4074 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTA 4132

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHT 239
             G++FT G+      G  +T+     P  V AL+G+   QV  GLN T  ++  G  V  
Sbjct: 4133 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGLHIGQVACGLNHTLAVSADGSLVWA 4191

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ +  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 4192 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 4250

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             L  G   +  +P+ +      GI +  ++ G EH +AL +SG V
Sbjct: 4251 GLPEGRARNHNRPQLVPVLL--GIFIDDIAVGAEHTLALSASGEV 4293



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 76/221 (34%), Positives = 111/221 (50%), Gaps = 13/221 (5%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           HTL   +   VFS G    G LGHG  +TQ              VV VSA   H+A V +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGTLQGKVVVCVSAGYRHSAAVTE 528

Query: 181 SGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VH 238
            G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTVW 584

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           + G   +G+LGHGDT     PK +  L+ + +  ++ AG    LA+T  G VY++G G+ 
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVVEALQGMFTR-KVCAGSQSSLALTSTGQVYAWGCGA- 642

Query: 299 FCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            CLG G  +   L+P+ I+        +V +S GD H +AL
Sbjct: 643 -CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLAL 680



 Score = 68.2 bits (165), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 70/267 (26%), Positives = 122/267 (45%), Gaps = 44/267 (16%)

Query: 87  NGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGP 146
           N + ++  + +Q       +V  SAG       R+   +  +  +++ G    G LGHG 
Sbjct: 494 NSSTQKYPKLIQGTLQGKVVVCVSAGY------RHSAAVTEDGELYTWGEGDFGRLGHGD 547

Query: 147 ETTQCVSFTRINFPS----AAHVVQVSASENHAAFVLQSGQV---FTCGDNSSFCCGHRD 199
             ++       N P+     ++V +VS   +H   + + G+    F  GDN     GH D
Sbjct: 548 SNSR-------NIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKL--GHGD 598

Query: 200 TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT--------CGSNTHGQLGHG 251
           TNR +++P++VEAL+G+  ++V AG   +  LT  G V+         CGS+    L   
Sbjct: 599 TNR-VYKPKVVEALQGMFTRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATAL--- 654

Query: 252 DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL- 310
                  PK I  L     +V I+ G S+ LA++ +  VY++G+ S    G G     + 
Sbjct: 655 ------RPKLIEELAAT-RIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPIT 707

Query: 311 QPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           +P+ +      G+ + ++SAG  H +A
Sbjct: 708 KPKKVSGL--DGVAIQQISAGTSHSLA 732



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 105/228 (46%), Gaps = 11/228 (4%)

Query: 114  MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ +++ +  +F+ G+   G LG G  + + +   R+      H+ QV+   
Sbjct: 4118 VQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGLHIGQVACGL 4176

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G +   F  GD      G+         P+ V+ L G+  K+V  G  F+ 
Sbjct: 4177 NHTLAVSADGSLVWAFGDGDYGKLGLGNSTAKS---SPQKVDVLCGIGIKKVACGTQFSV 4233

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             LT  GHV+T G +    L  G   +   P+ +  L  +  +  IA G  + LA++ +G 
Sbjct: 4234 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQLVPVLLGI-FIDDIAVGAEHTLALSASGE 4292

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            VY++GS S   LG G  +   +P  +   + K I   ++SAG  H  A
Sbjct: 4293 VYAWGSNSEGQLGLGHTNHVREPTLVTALQGKNIR--QISAGRCHSAA 4338



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 83/181 (45%), Gaps = 19/181 (10%)

Query: 115 QITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ----- 167
           +++ G  HT+ +S    +V+S G    G LGHG          R+  P     +Q     
Sbjct: 565 EVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-------DTNRVYKPKVVEALQGMFTR 617

Query: 168 -VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
            V A    +  +  +GQV+  G  +   CG  +      RP+L+E L       ++ G +
Sbjct: 618 KVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT--ALRPKLIEELAATRIVDISIGDS 675

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVT 285
               L+    V+  G+N+ GQ G G++    T PK ++ L+ V ++ QI+AG S+ LA T
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGV-AIQQISAGTSHSLAWT 734

Query: 286 G 286
            
Sbjct: 735 A 735



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 65/128 (50%), Gaps = 4/128 (3%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 4011 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4070

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H  
Sbjct: 4071 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 4128

Query: 337  ALDSSGYV 344
             + + G +
Sbjct: 4129 VVTADGKL 4136



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 80/180 (44%), Gaps = 11/180 (6%)

Query: 115  QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HTL +S   S V++ G    G LG G  T +  S  +++      + +V+   
Sbjct: 4171 QVACGLNHTLAVSADGSLVWAFGDGDYGKLGLGNSTAKS-SPQKVDVLCGIGIKKVACGT 4229

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    +LV  L G+    +  G   T 
Sbjct: 4230 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QLVPVLLGIFIDDIAVGAEHTL 4285

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L+  G V+  GSN+ GQLG G T     P  +  L+   ++ QI+AG  +  A T   V
Sbjct: 4286 ALSASGEVYAWGSNSEGQLGLGHTNHVREPTLVTALQG-KNIRQISAGRCHSAAWTAAPV 4344


>gi|395541966|ref|XP_003772907.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3, partial
           [Sarcophilus harrisii]
          Length = 638

 Score = 99.0 bits (245), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 111/227 (48%), Gaps = 7/227 (3%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CGS+  G LGH  E  +     +I   +  H+V V+  E+H+  +
Sbjct: 44  GNHSIFLLEDGEVYTCGSNTKGQLGHEREGNKP---EQIGALADQHIVHVACGESHSLAL 100

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    GH  T   +  PRL++ L      QV+ G      L   G   
Sbjct: 101 SDQGQLFSWGAGSDGQLGHTTTEDSVAIPRLIKKLNQQMILQVSCGNWHCMALAADGQFF 160

Query: 239 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 161 TWGQNRHGQLGLGKEFPSQASPQRVKSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGRNN 219

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V
Sbjct: 220 AGQLGLSDETDRQSPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGV 264



 Score = 95.5 bits (236), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 75/234 (32%), Positives = 114/234 (48%), Gaps = 7/234 (2%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LGH   T   V+  R I   +   ++QVS  
Sbjct: 88  VHVACGESHSLALSDQGQLFSWGAGSDGQLGH-TTTEDSVAIPRLIKKLNQQMILQVSCG 146

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G N     G          P+ V++L+G+P  QV AG   +  L
Sbjct: 147 NWHCMALAADGQFFTWGQNRHGQLGLGKEFPSQASPQRVKSLEGIPLAQVAAGGAHSFAL 206

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 207 SLSGAVFGWGRNNAGQLGLSDETDRQSPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVF 265

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYV 344
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +
Sbjct: 266 TFGAGSFGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLI 317



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 100/189 (52%), Gaps = 10/189 (5%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   + +V+   NH+ F+L+ G+V+TCG N+    GH R+ N    +P  + AL    
Sbjct: 31  FISDRSIKEVACGGNHSIFLLEDGEVYTCGSNTKGQLGHEREGN----KPEQIGALADQH 86

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ +G + + G+ + GQLGH  T D    P+ I  L +   ++Q++ 
Sbjct: 87  IVHVACGESHSLALSDQGQLFSWGAGSDGQLGHTTTEDSVAIPRLIKKLNQ-QMILQVSC 145

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + +A+  +G  +++G   +  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 146 GNWHCMALAADGQFFTWGQNRHGQLGLGKEFPSQASPQRVKSL--EGIPLAQVAAGGAHS 203

Query: 336 VALDSSGYV 344
            AL  SG V
Sbjct: 204 FALSLSGAV 212



 Score = 75.1 bits (183), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 65/195 (33%), Positives = 97/195 (49%), Gaps = 8/195 (4%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++ G +H + L ++   F+ G +  G LG G E     S  R+       + QV+A  
Sbjct: 141 LQVSCGNWHCMALAADGQFFTWGQNRHGQLGLGKEFPSQASPQRVKSLEGIPLAQVAAGG 200

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
            H+  +  SG VF  G N++   G  D T+R    P  V+ L+      ++ G   T  L
Sbjct: 201 AHSFALSLSGAVFGWGRNNAGQLGLSDETDRQ--SPCHVKLLRTQKVVYISCGEEHTAVL 258

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGNGV 289
           T  G V T G+ + GQLGH    D   P+ +  LE +GS V QIA G  + LA V  +G+
Sbjct: 259 TKSGGVFTFGAGSFGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGL 316

Query: 290 VYSFGSGSNFCLGHG 304
           +Y+FG G+   LG G
Sbjct: 317 IYAFGCGARGQLGTG 331


>gi|357164242|ref|XP_003579993.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like
           [Brachypodium distachyon]
          Length = 548

 Score = 99.0 bits (245), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 99/338 (29%), Positives = 157/338 (46%), Gaps = 20/338 (5%)

Query: 17  LIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCALHSIYAGMSR 76
           ++  +L+S  L   DLA LE T K F       P    SL +LAA  +C   +++  M  
Sbjct: 60  VLLRVLSSCELDPKDLAALEATCKFFRDPANFPPDLALSLPELAAFDMCQERAMFKPMKP 119

Query: 77  NVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLIS-NSSVFSCG 135
             +  L  RC G+WK VLR++   E +    ++     Q+  G  H+++++    V+S G
Sbjct: 120 KEKEWLKQRCGGSWKLVLRYILVGEKNYRREKS-----QVIAGPGHSIVVTAKGDVYSFG 174

Query: 136 SSLCGVLGHGPETTQ---CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG-DNS 191
            +  G LG G    +   C+    I+      + Q +        V  +G V+T G D  
Sbjct: 175 VNCSGQLGLGDRENKFKPCL----ISSLQGIRITQAAVGLRRTMLVSDTGSVYTFGLDTF 230

Query: 192 SFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH 250
            +   +  +N   +  P+L+E+LKGV   Q + G  F+  L+  G V+T       +LGH
Sbjct: 231 GWLDQYGGSNGNCVNSPKLLESLKGVFVVQASIGGYFSAVLSREGRVYTFSWGRAERLGH 290

Query: 251 GDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGV---VYSFGSGSNFCLGHGEQ 306
              L    P+ ++ PL++V  V QIAAG  Y+L ++ +     VYS G G    LGHG +
Sbjct: 291 SSELSDVEPRLLSGPLDDV-LVAQIAAGNCYLLLLSYHPTGMSVYSLGCGLGGKLGHGNK 349

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             E  P+ I  F+   I  + +SAG  H   +   G V
Sbjct: 350 DFEGVPKLIGHFQAFNIRPMSISAGAWHAAVMCRDGRV 387



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 52/152 (34%), Positives = 71/152 (46%), Gaps = 15/152 (9%)

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
           + +SA   HAA + + G+VFT G NSS C GH D+   +  PR VE L  V    V+AG 
Sbjct: 369 MSISAGAWHAAVMCRDGRVFTWGWNSSGCLGHGDSEDCVTLPRAVEGLNNVKAVHVSAGE 428

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGD----TLDRPTPKSIAPLEEVGS-VVQI------ 274
             T  +   G V++ G      LG  D      D   PK    L ++    VQI      
Sbjct: 429 WCTFVVADNGDVYSFGFRGSHNLGFQDNDAENEDVLPPKPATLLADLNERFVQISPTSAY 488

Query: 275 ----AAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
               A  P + +A+  +G+VY+FG GS   LG
Sbjct: 489 NWNNAEQPHHTVALAESGIVYAFGGGSMGQLG 520



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 44/139 (31%), Positives = 61/139 (43%), Gaps = 16/139 (11%)

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPS 279
           ++AG      +   G V T G N+ G LGHGD+ D  T P+++  L  V   V ++AG  
Sbjct: 371 ISAGAWHAAVMCRDGRVFTWGWNSSGCLGHGDSEDCVTLPRAVEGLNNV-KAVHVSAGEW 429

Query: 280 YMLAVTGNGVVYSFGSGSNFCLG----HGEQHDELQPRA---IQTFRRKGIHVVRVSAGD 332
               V  NG VYSFG   +  LG      E  D L P+    +     + + +   SA +
Sbjct: 430 CTFVVADNGDVYSFGFRGSHNLGFQDNDAENEDVLPPKPATLLADLNERFVQISPTSAYN 489

Query: 333 -------EHVVALDSSGYV 344
                   H VAL  SG V
Sbjct: 490 WNNAEQPHHTVALAESGIV 508


>gi|357149503|ref|XP_003575134.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Brachypodium
           distachyon]
          Length = 448

 Score = 98.6 bits (244), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 73/230 (31%), Positives = 121/230 (52%), Gaps = 8/230 (3%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVS--FTRINFPSAAHVVQVSASE 172
           ++ G  H++ L+S+ +V S G    G LGHG    + V    +  + P  A VV +  ++
Sbjct: 25  VSAGANHSVALLSSKAVCSWGRGEDGQLGHGDAEDRPVPTLLSGFDVPGIASVV-ICGAD 83

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           +  A+  +  Q+++ G       GH +++  +F P+ +EAL+G+  KQ+  G +    +T
Sbjct: 84  HTTAYSDEQMQLYSWGWGDFGRLGHGNSSD-VFHPQPIEALQGIKIKQIACGDSHCLAVT 142

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G VH+ G N +GQLG G+T D   P+ I   E V  V  IAAG  +  A+  +G +Y 
Sbjct: 143 DAGQVHSWGRNQNGQLGLGNTEDSLLPQKIHAFEGV-CVKMIAAGAEHTAAILEDGDLYG 201

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           +G G    LG G+++D L P  + +   +G  +V V+ G  H V + SSG
Sbjct: 202 WGWGQYGNLGLGDRNDRLVPEKVSSV--EGEKMVLVACGWRHTVTVSSSG 249



 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/229 (25%), Positives = 107/229 (46%), Gaps = 7/229 (3%)

Query: 116 ITTGRYHTLLISNSSV--FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           +  G  HT   S+  +  +S G    G LGHG  ++       I       + Q++  ++
Sbjct: 78  VICGADHTTAYSDEQMQLYSWGWGDFGRLGHG-NSSDVFHPQPIEALQGIKIKQIACGDS 136

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H   V  +GQV + G N +   G  +T   +  P+ + A +GV  K + AG   T  +  
Sbjct: 137 HCLAVTDAGQVHSWGRNQNGQLGLGNTEDSLL-PQKIHAFEGVCVKMIAAGAEHTAAILE 195

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G ++  G   +G LG GD  DR  P+ ++ +E    +V +A G  + + V+ +G +Y++
Sbjct: 196 DGDLYGWGWGQYGNLGLGDRNDRLVPEKVSSVEGE-KMVLVACGWRHTVTVSSSGDLYTY 254

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           G      LGHG+  D L P  ++  + +   + +++ G  H +A+   G
Sbjct: 255 GWSKYGQLGHGDFEDHLVPHKLEALKDR--FISQIAGGWRHTMAVAGDG 301



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 95/209 (45%), Gaps = 6/209 (2%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G  HT  ++ +  ++  G    G LG G    + V   +++      +V V+    H
Sbjct: 183 IAAGAEHTAAILEDGDLYGWGWGQYGNLGLGDRNDRLVP-EKVSSVEGEKMVLVACGWRH 241

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V  SG ++T G +     GH D    +  P  +EALK     Q+  G   T  +   
Sbjct: 242 TVTVSSSGDLYTYGWSKYGQLGHGDFEDHLV-PHKLEALKDRFISQIAGGWRHTMAVAGD 300

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
           G ++  G N  GQ+G  D +D  +P + I P E+   V Q+A G  + LA+T N  V+S+
Sbjct: 301 GKLYGWGWNKFGQVGVADNVDHCSPVQVIFPDEQ--KVAQVACGWRHTLALTENKNVFSW 358

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           G G++  LGHGE  D   P+ I      G
Sbjct: 359 GRGTSGQLGHGEIIDRNTPKMIDALSLDG 387



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/181 (32%), Positives = 89/181 (49%), Gaps = 8/181 (4%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALK--GVPCKQV 221
           V  VSA  NH+  +L S  V + G       GH D  +RP+  P L+      G+    +
Sbjct: 22  VALVSAGANHSVALLSSKAVCSWGRGEDGQLGHGDAEDRPV--PTLLSGFDVPGIASVVI 79

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
               + T +   +  +++ G    G+LGHG++ D   P+ I  L+ +  + QIA G S+ 
Sbjct: 80  CGADHTTAYSDEQMQLYSWGWGDFGRLGHGNSSDVFHPQPIEALQGI-KIKQIACGDSHC 138

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           LAVT  G V+S+G   N  LG G   D L P+ I  F  +G+ V  ++AG EH  A+   
Sbjct: 139 LAVTDAGQVHSWGRNQNGQLGLGNTEDSLLPQKIHAF--EGVCVKMIAAGAEHTAAILED 196

Query: 342 G 342
           G
Sbjct: 197 G 197



 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 40/125 (32%), Positives = 62/125 (49%), Gaps = 3/125 (2%)

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           V+AG N +  L     V + G    GQLGHGD  DRP P  ++  +  G    +  G  +
Sbjct: 25  VSAGANHSVALLSSKAVCSWGRGEDGQLGHGDAEDRPVPTLLSGFDVPGIASVVICGADH 84

Query: 281 MLAVTGNGV-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
             A +   + +YS+G G    LGHG   D   P+ I+    +GI + +++ GD H +A+ 
Sbjct: 85  TTAYSDEQMQLYSWGWGDFGRLGHGNSSDVFHPQPIEAL--QGIKIKQIACGDSHCLAVT 142

Query: 340 SSGYV 344
            +G V
Sbjct: 143 DAGQV 147


>gi|125821491|ref|XP_698091.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Danio
           rerio]
          Length = 4846

 Score = 98.6 bits (244), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 71/235 (30%), Positives = 124/235 (52%), Gaps = 13/235 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 403 IEAGQYCTFVISSDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRAIKKVSSSKGS 461

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 462 DGHTLAFTSEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 520

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           ++  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 521 VSEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 577

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           V+SFG G N  LGHG+ +   +P+ ++    +G+ + +V AG +  +AL S+G V
Sbjct: 578 VWSFGGGDNGKLGHGDTNRVYKPKVVEAL--QGMFIRKVCAGSQSSLALTSTGQV 630



 Score = 91.3 bits (225), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 124/237 (52%), Gaps = 14/237 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4016 QVVCGQNCTFVIQANGTVSACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQMVTSCG 4074

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4075 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4133

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + + G+  +G+LG G+T ++  P+ ++ LE  +VG   Q+A G ++ LAV+ +G
Sbjct: 4134 VTSDGKLFSFGNGDYGRLGLGNTSNKKLPERVSALEGHQVG---QVACGLNHTLAVSADG 4190

Query: 289  V-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            + V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G V
Sbjct: 4191 MTVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGNV 4245



 Score = 81.6 bits (200), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 109/225 (48%), Gaps = 7/225 (3%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 4078 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTS 4136

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHT 239
             G++F+ G+      G  +T+     P  V AL+G    QV  GLN T  ++  G  V  
Sbjct: 4137 DGKLFSFGNGDYGRLGLGNTSNKKL-PERVSALEGHQVGQVACGLNHTLAVSADGMTVWA 4195

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ +  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 4196 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVALTKDGNVYTFGQDRLI 4254

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             L  G   +  +P+ +      G+ +  V+ G EH + L S+G V
Sbjct: 4255 GLPEGRARNHNRPQQVPAL--TGVFIEDVAVGAEHTLTLSSTGDV 4297



 Score = 67.4 bits (163), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 67/239 (28%), Positives = 114/239 (47%), Gaps = 39/239 (16%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS----AAHVVQVSA 170
           ++ G  H+  +S +  +++ G    G LGHG   ++       N P+     ++V +VS 
Sbjct: 511 VSAGYRHSAAVSEDGELYTWGEGDFGRLGHGDSNSR-------NIPTLVKDISNVGEVSC 563

Query: 171 SENHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
             +H   + + G+    F  GDN     GH DTNR +++P++VEAL+G+  ++V AG   
Sbjct: 564 GSSHTIALSKDGRTVWSFGGGDNGKL--GHGDTNR-VYKPKVVEALQGMFIRKVCAGSQS 620

Query: 228 TGFLTIRGHVHT--------CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
           +  LT  G V+         CGS+    L          PK I  L     VV I+ G S
Sbjct: 621 SLALTSTGQVYAWGCGACLGCGSSEATAL---------RPKLIEELATT-RVVDISIGDS 670

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           + LA++ +  VY++G+ S    G G     + +P+ +      G+ + ++SAG  H +A
Sbjct: 671 HCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVIGL--DGVAIQQISAGTSHSLA 727



 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 102/228 (44%), Gaps = 11/228 (4%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ ++ S+  +FS G+   G LG G  + + +   R++      V QV+   
Sbjct: 4122 VQMSCGFKHSAVVTSDGKLFSFGNGDYGRLGLGNTSNKKLP-ERVSALEGHQVGQVACGL 4180

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G     F  GD      G+         P+ V+ L G+  K+V  G  F+ 
Sbjct: 4181 NHTLAVSADGMTVWAFGDGDYGKLGLGNSTAKS---SPQKVDVLCGIGIKKVACGTQFSV 4237

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             LT  G+V+T G +    L  G   +   P+ +  L  V  +  +A G  + L ++  G 
Sbjct: 4238 ALTKDGNVYTFGQDRLIGLPEGRARNHNRPQQVPALTGV-FIEDVAVGAEHTLTLSSTGD 4296

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            VY++GS S   LG G  +   +P  I   + K I   ++SAG  H  A
Sbjct: 4297 VYAWGSNSEGQLGLGHTNHVREPTLISALQGKNIQ--QISAGRCHSAA 4342



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 71/148 (47%), Gaps = 6/148 (4%)

Query: 199  DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT 258
            +  R I  P L  +      +QV  G N T  +   G V  CG  ++G+LG G++ D   
Sbjct: 3997 EAGRNILVPTLAPSFSQA--QQVVCGQNCTFVIQANGTVSACGEGSYGRLGQGNSDDLHV 4054

Query: 259  PKSIAPLE--EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
               I+ L+   V  +V       + +A+T +G V+S+G G    LGHG    + +PR I+
Sbjct: 4055 LTVISALQGFVVTQMVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIE 4114

Query: 317  TFRRKGIHVVRVSAGDEHVVALDSSGYV 344
                +G  VV++S G +H   + S G +
Sbjct: 4115 AL--QGEEVVQMSCGFKHSAVVTSDGKL 4140



 Score = 50.8 bits (120), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 53/180 (29%), Positives = 82/180 (45%), Gaps = 11/180 (6%)

Query: 115  QITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HTL +S    +V++ G    G LG G  T +  S  +++      + +V+   
Sbjct: 4175 QVACGLNHTLAVSADGMTVWAFGDGDYGKLGLGNSTAKS-SPQKVDVLCGIGIKKVACGT 4233

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + V AL GV  + V  G   T 
Sbjct: 4234 QFSVALTKDGNVYTFGQDRLIGLPEGRARNHNRP----QQVPALTGVFIEDVAVGAEHTL 4289

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L+  G V+  GSN+ GQLG G T     P  I+ L+   ++ QI+AG  +  A T   V
Sbjct: 4290 TLSSTGDVYAWGSNSEGQLGLGHTNHVREPTLISALQG-KNIQQISAGRCHSAAWTAPPV 4348


>gi|432847192|ref|XP_004065976.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Oryzias
           latipes]
          Length = 1049

 Score = 98.2 bits (243), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 85/285 (29%), Positives = 120/285 (42%), Gaps = 55/285 (19%)

Query: 112 GNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGH-----GPETTQCVSFTRINFPSAAHV 165
           G  ++  G  HTL L+ + SV++CGS+ CG LGH      PE    +   +I   S    
Sbjct: 34  GLKEVACGGQHTLFLLQDGSVYTCGSNSCGQLGHDKAGNSPELVGALDTQKITMVSCGRA 93

Query: 166 VQVSASENHAAFVL---------------------------------------------Q 180
             V+ +E    FV                                              +
Sbjct: 94  HSVAVNEQGQVFVWGAGDGGQLGLETAETAVRIPRLLKKLCDHSISQVVCGNQHCIALSR 153

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            GQ+FT G NSS   G          P  V++L G+P  Q+TAG +    L++ G V   
Sbjct: 154 DGQLFTWGQNSSGQLGLGKGETSKLSPSPVKSLAGIPLAQITAGGDHCFALSLSGAVFGW 213

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
           G N  GQLG  D  DR  P  I  L     VV I+ G  +  A+T +G +++FG GS   
Sbjct: 214 GKNKAGQLGLNDKQDRAVPCHIKFLRS-QRVVYISCGDEHTAALTKSGGLFTFGDGSRGQ 272

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYV 344
           LGHG  ++EL PR +      G  V +++ G  H +A + SSG V
Sbjct: 273 LGHGSSNNELLPRRVMELM--GTEVSQITCGRHHTLAFVPSSGTV 315



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/174 (33%), Positives = 82/174 (47%), Gaps = 7/174 (4%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QIT G  H   +S S +VF  G +  G LG   +  + V    I F  +  VV +S  + 
Sbjct: 193 QITAGGDHCFALSLSGAVFGWGKNKAGQLGLNDKQDRAVP-CHIKFLRSQRVVYISCGDE 251

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFLT 232
           H A + +SG +FT GD S    GH  +N  +  PR V  L G    Q+T G + T  F+ 
Sbjct: 252 HTAALTKSGGLFTFGDGSRGQLGHGSSNNELL-PRRVMELMGTEVSQITCGRHHTLAFVP 310

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
             G V+  G N+HGQLG G   D  +P    P++     + +  G  Y+   TG
Sbjct: 311 SSGTVYAFGCNSHGQLGTGILADLRSPH---PVKNDFLTLNLRKGKVYLRIDTG 361



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/226 (28%), Positives = 106/226 (46%), Gaps = 13/226 (5%)

Query: 115 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+  G  H + +S +  +F+ G +  G LG G   T  +S + +   +   + Q++A  +
Sbjct: 140 QVVCGNQHCIALSRDGQLFTWGQNSSGQLGLGKGETSKLSPSPVKSLAGIPLAQITAGGD 199

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           H   +  SG VF  G N +   G  D  +R +  P  ++ L+      ++ G   T  LT
Sbjct: 200 HCFALSLSGAVFGWGKNKAGQLGLNDKQDRAV--PCHIKFLRSQRVVYISCGDEHTAALT 257

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGNGVV 290
             G + T G  + GQLGHG + +   P+ +  +E +G+ V QI  G  + LA V  +G V
Sbjct: 258 KSGGLFTFGDGSRGQLGHGSSNNELLPRRV--MELMGTEVSQITCGRHHTLAFVPSSGTV 315

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQT-----FRRKGIHVVRVSAG 331
           Y+FG  S+  LG G   D   P  ++        RKG   +R+  G
Sbjct: 316 YAFGCNSHGQLGTGILADLRSPHPVKNDFLTLNLRKGKVYLRIDTG 361



 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 70/141 (49%), Gaps = 6/141 (4%)

Query: 203 PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           P+F PR+     G   K+V  G   T FL   G V+TCGSN+ GQLGH    +  +P+ +
Sbjct: 20  PVFEPRICHVFSGRGLKEVACGGQHTLFLLQDGSVYTCGSNSCGQLGHDKAGN--SPELV 77

Query: 263 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRK 321
             L +   +  ++ G ++ +AV   G V+ +G+G    LG       ++ PR ++     
Sbjct: 78  GAL-DTQKITMVSCGRAHSVAVNEQGQVFVWGAGDGGQLGLETAETAVRIPRLLKKLCDH 136

Query: 322 GIHVVRVSAGDEHVVALDSSG 342
            I   +V  G++H +AL   G
Sbjct: 137 SIS--QVVCGNQHCIALSRDG 155


>gi|383852591|ref|XP_003701810.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Megachile rotundata]
          Length = 1135

 Score = 98.2 bits (243), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 67/222 (30%), Positives = 117/222 (52%), Gaps = 9/222 (4%)

Query: 126 ISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAFVLQSGQV 184
           +++ ++F  GS++ G LG G    + +   R ++F  A  + Q++  EN+   + + GQV
Sbjct: 73  VTDKNMFCWGSTIHGELGLGGIEDENILVPRELDFQKATEIEQIACGENYTVLITRDGQV 132

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
           ++CG+N     GH    +   R +L+  L     K+V  G + T  +   G + + GSN 
Sbjct: 133 YSCGNNDYGQLGHEKGRK---RLQLIPGLDAFVFKKVACGAHHTLAVNEWGQLFSWGSNA 189

Query: 245 HGQLG-HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 303
            GQLG +   L    P  +  L     VVQ+A G +++LA+T NG +YS+GS S+  LG 
Sbjct: 190 EGQLGLNSKNLIECVPHMVRAL-GTSVVVQVACGINHVLALTNNGKLYSWGSNSDGQLGL 248

Query: 304 G-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G +  +E++P+ I +    G+ +  ++ G  H +A+  SG V
Sbjct: 249 GTDVKNEIKPKLISSL--AGVPIAFITCGGYHSMAISKSGAV 288



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/226 (30%), Positives = 111/226 (49%), Gaps = 6/226 (2%)

Query: 115 QITTGRYHTLLISN-SSVFSCGSSLCGVLG-HGPETTQCVSFTRINFPSAAHVVQVSASE 172
           ++  G +HTL ++    +FS GS+  G LG +     +CV    +     + VVQV+   
Sbjct: 165 KVACGAHHTLAVNEWGQLFSWGSNAEGQLGLNSKNLIECVPHM-VRALGTSVVVQVACGI 223

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           NH   +  +G++++ G NS    G     +   +P+L+ +L GVP   +T G   +  ++
Sbjct: 224 NHVLALTNNGKLYSWGSNSDGQLGLGTDVKNEIKPKLISSLAGVPIAFITCGGYHSMAIS 283

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G V   G NT GQLG  DT +R  P+ +  L+    V   A G  + + +T +G V++
Sbjct: 284 KSGAVFGWGKNTFGQLGLNDTRNRNLPRQLQTLQN-AKVCYAACGEEFSVFLTVDGGVFT 342

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            G+G    LGHG   +E+ PR  Q     G  V ++S G  H + L
Sbjct: 343 CGAGMYGQLGHGNTSNEILPR--QVMELMGSTVTQISCGKRHTLGL 386



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 68/149 (45%), Gaps = 4/149 (2%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           IT G YH++ IS S +VF  G +  G LG      + +   ++     A V   +  E  
Sbjct: 272 ITCGGYHSMAISKSGAVFGWGKNTFGQLGLNDTRNRNLP-RQLQTLQNAKVCYAACGEEF 330

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFLTI 233
           + F+   G VFTCG       GH +T+  I  PR V  L G    Q++ G   T G +  
Sbjct: 331 SVFLTVDGGVFTCGAGMYGQLGHGNTSNEIL-PRQVMELMGSTVTQISCGKRHTLGLVPS 389

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           RG V+  G    GQLG+  T    TP+ +
Sbjct: 390 RGRVYAWGLGGAGQLGNNITRSVATPQVV 418


>gi|348666178|gb|EGZ06006.1| hypothetical protein PHYSODRAFT_533148 [Phytophthora sojae]
          Length = 429

 Score = 98.2 bits (243), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 117/231 (50%), Gaps = 21/231 (9%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + +  G +HT+ +S +  +++ G+   G LG+G E+  C     I F S  +VV ++A  
Sbjct: 198 LTVECGEFHTVALSKDGEIWAWGNGEYGRLGNG-ESDTCEVPEPIEFFSKDNVVSIAAGR 256

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCG-----HRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
           + +  +  +G++++ G NS    G       D       P LVEA  G+  KQ+ AG + 
Sbjct: 257 DFSFALTDNGELYSWGGNSQNQLGIGGGLAMDVYNIESIPVLVEAFNGLSVKQIAAGYDH 316

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
              +T  G ++  GS    +           P  +  + E   +VQ+A G  Y +A++ N
Sbjct: 317 AAAVTDDGRLYMWGSKIWIE-----------PHEMTAVNEY-KMVQVACGRQYTVALSEN 364

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           G V++FG GS+ CLGHG++ ++LQP  I+      +++  +S GD H+ A+
Sbjct: 365 GEVFTFGKGSSNCLGHGDRKNQLQPVQIEALAD--VNITSISCGDYHMGAI 413



 Score = 74.3 bits (181), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 63/230 (27%), Positives = 111/230 (48%), Gaps = 17/230 (7%)

Query: 127 SNSSVFSCGSSLCGVLGHGPETTQCV--SFTRIN------FPSAAHVVQVSASENHAAFV 178
           + SSV++ G+   G LGHGP     +  ++  +       F   A +  V    +H+A +
Sbjct: 40  TQSSVYTWGNGTLGQLGHGPVVKSGIRNAYEELTPKLLEAFEGKA-ITHVEFGASHSAAI 98

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
            + G+++  G N     G  +++     PR VEALKGV    V+ G  FT  +   G ++
Sbjct: 99  DEDGKLYVWGSNEYSKLGLGESSEMETLPREVEALKGVKIVDVSCGDYFTAAVDADGKMY 158

Query: 239 TCGS-----NTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYS 292
           + G         G LGH    D PTP+ +  L + G  ++ +  G  + +A++ +G +++
Sbjct: 159 SWGWGGSTMKGAGGLGHAGGKDEPTPRLLTTLVDQGVPILTVECGEFHTVALSKDGEIWA 218

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           +G+G    LG+GE      P  I+ F +   +VV ++AG +   AL  +G
Sbjct: 219 WGNGEYGRLGNGESDTCEVPEPIEFFSKD--NVVSIAAGRDFSFALTDNG 266



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/182 (29%), Positives = 88/182 (48%), Gaps = 15/182 (8%)

Query: 176 AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR-------PRLVEALKGVPCKQVTAGLNFT 228
           AF  QS  V+T G+ +    GH    +   R       P+L+EA +G     V  G + +
Sbjct: 37  AFSTQS-SVYTWGNGTLGQLGHGPVVKSGIRNAYEELTPKLLEAFEGKAITHVEFGASHS 95

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
             +   G ++  GSN + +LG G++ +  T P+ +  L+ V  +V ++ G  +  AV  +
Sbjct: 96  AAIDEDGKLYVWGSNEYSKLGLGESSEMETLPREVEALKGV-KIVDVSCGDYFTAAVDAD 154

Query: 288 GVVYSFGSGSN-----FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           G +YS+G G +       LGH    DE  PR + T   +G+ ++ V  G+ H VAL   G
Sbjct: 155 GKMYSWGWGGSTMKGAGGLGHAGGKDEPTPRLLTTLVDQGVPILTVECGEFHTVALSKDG 214

Query: 343 YV 344
            +
Sbjct: 215 EI 216


>gi|332027112|gb|EGI67208.1| Putative E3 ubiquitin-protein ligase HERC2 [Acromyrmex echinatior]
          Length = 4853

 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 72/231 (31%), Positives = 112/231 (48%), Gaps = 13/231 (5%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSASENHA 175
            G++   L  +  VFS G    G LGHG     C+S  +   I    +  +  ++    H+
Sbjct: 3108 GKHALALTQDGKVFSWGEGEDGKLGHG----NCISLDKPKLIEVLKSKRIRDIACGSGHS 3163

Query: 176  AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTI 233
            A +  +G+++T G       GH DT     RP+LV+AL G    QV  G     T  LT 
Sbjct: 3164 AAIASNGELYTWGLGEYGRLGHGDTITQT-RPKLVQALIGHRVVQVACGSRDAQTMALTT 3222

Query: 234  RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
             G+V++ G    G+LG G +    TP  +  L  +G V+Q+  G  + LA+T  G V+++
Sbjct: 3223 DGYVYSWGDGDFGKLGRGGSDGCYTPLLVDRLNNLG-VIQVECGAQFSLALTKYGEVWTW 3281

Query: 294  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            G G  F LGHG  H   +P  ++  R  G  ++ V+ G  H +A+  +G V
Sbjct: 3282 GKGDYFRLGHGNDHHVRKPTLVEGLR--GKKIIHVAVGALHCLAVTDTGQV 3330



 Score = 85.5 bits (210), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 64/231 (27%), Positives = 115/231 (49%), Gaps = 13/231 (5%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA---AHVVQVSASENHA 175
           G+++  L  +  V+S G+   G LGHG      +S+       A    +++ ++    ++
Sbjct: 577 GKHYLALTQDGCVYSWGNGDGGRLGHG----DTISYDEPKLIEALLEKNIIFIACGSTYS 632

Query: 176 AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTI 233
           A +  +G+++T G  +    GH + +  +  P LV  LKG     V   +G + T  +T 
Sbjct: 633 AALSANGELYTWGRGNYGRLGHGNFDD-VMTPTLVTTLKGHTVVHVACGSGDSQTLCVTA 691

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V + G   +G+LG G T    TPK +  L ++ +VV++  G  +  A+T +G VY++
Sbjct: 692 SGIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDI-NVVKVFCGSQFSAALTAHGEVYTW 750

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G G  + LGHG +     P+ I++ R +   V  +S G  H++AL    +V
Sbjct: 751 GKGDAYRLGHGSEEHVRYPKVIESLRDR--KVKDLSVGTTHILALTEDQFV 799



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 70/255 (27%), Positives = 119/255 (46%), Gaps = 20/255 (7%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSF 154
             L+S++H           + +++G  H + +S+   V+S G    G LGHG +    VS+
Sbjct: 4072 LLESIQH------VFIKKVAVSSGGKHCIALSSEGHVYSWGEGDDGKLGHGNK----VSY 4121

Query: 155  TR---INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE 211
             R   I       +V ++   +H+A +  +G ++T G       GH D++  + RP++VE
Sbjct: 4122 DRPKLIEDLLGVEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQL-RPKVVE 4180

Query: 212  ALKGVPCKQVTAGLNFTGFL--TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 269
            AL+      V  G      L  T   +V + G   +G+LG G +     P  I  L  +G
Sbjct: 4181 ALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLG 4240

Query: 270  SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
             VV++  G  + +A+T +G VY++G G    LGHG      +PR +     +G  ++ ++
Sbjct: 4241 -VVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRKVAAL--QGKKIISIA 4297

Query: 330  AGDEHVVALDSSGYV 344
             G  H VA    G V
Sbjct: 4298 TGSLHCVACSDKGEV 4312



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 70/233 (30%), Positives = 108/233 (46%), Gaps = 13/233 (5%)

Query: 119  GRYHTLLI--SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS--AAHVVQVSASENH 174
            G   TL I      +++CG    G LG G +   C     I F S      V V +   H
Sbjct: 3052 GGSKTLFIVSQEGKLYACGEGTNGRLGLGDDNNMC-EPKAIPFLSQFVIKKVAVHSGGKH 3110

Query: 175  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
            A  + Q G+VF+ G+      GH +    + +P+L+E LK    + +  G   +  +   
Sbjct: 3111 ALALTQDGKVFSWGEGEDGKLGHGNCIS-LDKPKLIEVLKSKRIRDIACGSGHSAAIASN 3169

Query: 235  GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVY 291
            G ++T G   +G+LGHGDT+ +  PK +  L  +G  VVQ+A G   +  +A+T +G VY
Sbjct: 3170 GELYTWGLGEYGRLGHGDTITQTRPKLVQAL--IGHRVVQVACGSRDAQTMALTTDGYVY 3227

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            S+G G    LG G       P  +   R   + V++V  G +  +AL   G V
Sbjct: 3228 SWGDGDFGKLGRGGSDGCYTPLLVD--RLNNLGVIQVECGAQFSLALTKYGEV 3278



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/225 (30%), Positives = 107/225 (47%), Gaps = 15/225 (6%)

Query: 127  SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV----VQVSASENHAAFVLQSG 182
            ++  ++S G    G LG G   T  V    +   S  HV    V VS+   H   +   G
Sbjct: 4044 ADGKIYSTGYGAAGRLGIG--GTDSVMIPTL-LESIQHVFIKKVAVSSGGKHCIALSSEG 4100

Query: 183  QVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 241
             V++ G+      GH   N+  + RP+L+E L GV    +  G + +  +T  G ++T G
Sbjct: 4101 HVYSWGEGDDGKLGH--GNKVSYDRPKLIEDLLGVEIVDIACGGHHSAAITSAGWLYTWG 4158

Query: 242  SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLAVTGNGVVYSFGSGSNF 299
               +G+LGHGD+ D+  PK +  L++   V+ +A  +G +  L VT +  V+S+G G   
Sbjct: 4159 KGRYGRLGHGDSDDQLRPKVVEALQDY-KVIDVACGSGDAQTLCVTDDDNVWSWGDGDYG 4217

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             LG G       P  I +    G+ VV+V  G +  VAL  SG V
Sbjct: 4218 KLGRGGSDGCKVPLKIDSL--AGLGVVKVECGSQFSVALTRSGAV 4260



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 67/229 (29%), Positives = 98/229 (42%), Gaps = 14/229 (6%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA---HVVQVS- 169
             I  G  H+  I SN  +++ G    G LGHG   TQ    TR     A     VVQV+ 
Sbjct: 3155 DIACGSGHSAAIASNGELYTWGLGEYGRLGHGDTITQ----TRPKLVQALIGHRVVQVAC 3210

Query: 170  -ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
             + +     +   G V++ GD      G R  +   + P LV+ L  +   QV  G  F+
Sbjct: 3211 GSRDAQTMALTTDGYVYSWGDGDFGKLG-RGGSDGCYTPLLVDRLNNLGVIQVECGAQFS 3269

Query: 229  GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
              LT  G V T G   + +LGHG+      P  +  L     ++ +A G  + LAVT  G
Sbjct: 3270 LALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRG-KKIIHVAVGALHCLAVTDTG 3328

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             VY++G   +   G+G      +P  +     +   V RVS G  H +A
Sbjct: 3329 QVYAWGDNDHGQQGNGTTSVNRKPSLVHDL--EDARVNRVSCGSSHSIA 3375



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 77/164 (46%), Gaps = 4/164 (2%)

Query: 180  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
            Q   V+  G N     G    ++ I  P   E L  +    +  G      ++  G ++ 
Sbjct: 3010 QQSAVYVWGLNDKDQLGGLKGSK-IKLPVYSETLSKLKPIHIAGGSKTLFIVSQEGKLYA 3068

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            CG  T+G+LG GD  +   PK+I  L + V   V + +G  + LA+T +G V+S+G G +
Sbjct: 3069 CGEGTNGRLGLGDDNNMCEPKAIPFLSQFVIKKVAVHSGGKHALALTQDGKVFSWGEGED 3128

Query: 299  FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
              LGHG      +P+ I+  + K I    ++ G  H  A+ S+G
Sbjct: 3129 GKLGHGNCISLDKPKLIEVLKSKRIR--DIACGSGHSAAIASNG 3170



 Score = 58.5 bits (140), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 39/112 (34%), Positives = 60/112 (53%), Gaps = 5/112 (4%)

Query: 235  GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV--VQIAAGPSYMLAVTGNGVVYS 292
            G ++  G N  GQLG    L+ P  K  AP E + ++  +Q+A G   + AVT +G +YS
Sbjct: 3994 GAIYGWGHNHRGQLGG---LEGPKVKLPAPCESLSALRPIQLAGGEQTLFAVTADGKIYS 4050

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             G G+   LG G     + P  +++ +   I  V VS+G +H +AL S G+V
Sbjct: 4051 TGYGAAGRLGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCIALSSEGHV 4102



 Score = 54.3 bits (129), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 77/167 (46%), Gaps = 4/167 (2%)

Query: 118  TGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL +++  +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4194 SGDAQTLCVTDDDNVWSWGDGDYGKLGRG-GSDGCKVPLKIDSLAGLGVVKVECGSQFSV 4252

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH  T+  + RPR V AL+G     +  G       + +G 
Sbjct: 4253 ALTRSGAVYTWGKGDYHRLGH-GTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGE 4311

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V T G N  GQLG G T     P+ +  L+    + ++A G ++ LA
Sbjct: 4312 VFTWGDNDEGQLGDGTTSALHRPRLVHALQG-KKITRVACGSAHTLA 4357



 Score = 46.6 bits (109), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 47/174 (27%), Positives = 78/174 (44%), Gaps = 18/174 (10%)

Query: 118 TGRYHTLLISNSS-VFSCGSSLCGVLGHG----PETTQCVS-FTRINFPSAAHVVQVSAS 171
           +G   TL ++ S  VFS G    G LG G     +T + V     IN      VV+V   
Sbjct: 681 SGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDIN------VVKVFCG 734

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
              +A +   G+V+T G   ++  GH  +   +  P+++E+L+    K ++ G      L
Sbjct: 735 SQFSAALTAHGEVYTWGKGDAYRLGH-GSEEHVRYPKVIESLRDRKVKDLSVGTTHILAL 793

Query: 232 TIRGHVHTCGSNTHGQLGH--GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           T    V+  G N +GQ+    G  +  PT   + P     +V+ +A+GP+   A
Sbjct: 794 TEDQFVYGWGRNDYGQIDPTLGPIISEPT---LCPTLSSKTVIGLASGPTQSFA 844



 Score = 46.2 bits (108), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 55/111 (49%), Gaps = 7/111 (6%)

Query: 237  VHTCGSNTHGQLG--HGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            V+  G N   QLG   G  +  P   ++++ L+ +     IA G   +  V+  G +Y+ 
Sbjct: 3014 VYVWGLNDKDQLGGLKGSKIKLPVYSETLSKLKPI----HIAGGSKTLFIVSQEGKLYAC 3069

Query: 294  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            G G+N  LG G+ ++  +P+AI    +  I  V V +G +H +AL   G V
Sbjct: 3070 GEGTNGRLGLGDDNNMCEPKAIPFLSQFVIKKVAVHSGGKHALALTQDGKV 3120


>gi|328701601|ref|XP_001942852.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1
           [Acyrthosiphon pisum]
          Length = 4257

 Score = 97.8 bits (242), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 80/247 (32%), Positives = 126/247 (51%), Gaps = 17/247 (6%)

Query: 106 IVETSAGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH 164
           +V + +   Q+  G+Y T +I +   V +CG +  G LG G  + Q V   RIN      
Sbjct: 368 LVRSLSDVQQVEAGQYCTFIIDTKGCVSACGKNSYGRLGLGNSSNQPVP-KRINI--NCK 424

Query: 165 VVQVSAS---ENHAAFVLQSGQVFTCGDNSSFCCGHRD--TNRPIFRPRLVEA-LKGVPC 218
           + QVS+S   + H+  +  +G+V++ GD      GH D  T++    P+L++    G   
Sbjct: 425 IKQVSSSKGCDGHSLALSDTGEVYSWGDGDYGKLGHGDVATHK---EPKLIQGPFIGKVI 481

Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
           + V+AG   +  +T  G ++T G   HG+LGHGD   R  P  +  L ++  V  +A G 
Sbjct: 482 ELVSAGYRHSAAVTSDGQLYTWGEGDHGRLGHGDCNPRFIPTLVKSLSDM-PVGYVACGS 540

Query: 279 SYMLAVTGNG-VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           ++ LA + +G  V+SFGSG N  LGHG      +P+ I+  R   I   +V+AG    VA
Sbjct: 541 THTLACSRDGNTVWSFGSGDNGKLGHGNTIRLYKPQKIEGLRHYKIK--KVAAGIHFSVA 598

Query: 338 LDSSGYV 344
           L  +G V
Sbjct: 599 LTCTGEV 605



 Score = 88.2 bits (217), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 68/227 (29%), Positives = 108/227 (47%), Gaps = 9/227 (3%)

Query: 124  LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS---ASENHAAFVLQ 180
            +L S  +V SCG    G LGHG  +    + T I+      + QVS    S+ H+  + +
Sbjct: 3440 VLTSQGTVLSCGEGNYGRLGHG-HSDSLPNLTMISALQGFVITQVSTSIGSDGHSLALTE 3498

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            +G+VF+ GD      GH +  R   +P+L+E+L  V   QV  G   +  L+  G V+  
Sbjct: 3499 TGEVFSWGDGDFGKLGHGNNERQ-RKPKLIESLYDVVVIQVACGHKHSAVLSQDGEVYVF 3557

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
            GS  HG+LG G  +++  P  I   +   ++  IA G ++ + + G  VV++FG G    
Sbjct: 3558 GSAEHGKLGLGGHINKKRPTKIVH-KGFLNIKYIACGQNHTICI-GENVVWAFGEGEGGK 3615

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSLC 347
            LG G + D   P+ I T   K I   +   G+   + L   G +  C
Sbjct: 3616 LGIGSKKDIYVPQEIITLNGKNIK--KAYCGNGFTMFLSEDGELYSC 3660



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 62/180 (34%), Positives = 90/180 (50%), Gaps = 8/180 (4%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTA 223
           VV+   ++N A       +VF  G NSS    H +    +   PRLV +L  V  +QV A
Sbjct: 325 VVRTPLNQNSAELPQPLSEVFMWGSNSS--NQHAEGATEVTDIPRLVRSLSDV--QQVEA 380

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G   T  +  +G V  CG N++G+LG G++ ++P PK I    ++  V        + LA
Sbjct: 381 GQYCTFIIDTKGCVSACGKNSYGRLGLGNSSNQPVPKRININCKIKQVSSSKGCDGHSLA 440

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ-TFRRKGIHVVRVSAGDEHVVALDSSG 342
           ++  G VYS+G G    LGHG+     +P+ IQ  F  K I +  VSAG  H  A+ S G
Sbjct: 441 LSDTGEVYSWGDGDYGKLGHGDVATHKEPKLIQGPFIGKVIEL--VSAGYRHSAAVTSDG 498



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 64/223 (28%), Positives = 105/223 (47%), Gaps = 14/223 (6%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   + S+  +++ G    G LGHG    + +  T +   S   V  V+    H     
Sbjct: 489 RHSAAVTSDGQLYTWGEGDHGRLGHGDCNPRFIP-TLVKSLSDMPVGYVACGSTHTLACS 547

Query: 180 QSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
           + G     F  GDN     GH +T R +++P+ +E L+    K+V AG++F+  LT  G 
Sbjct: 548 RDGNTVWSFGSGDNGKL--GHGNTIR-LYKPQKIEGLRHYKIKKVAAGIHFSVALTCTGE 604

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS--VVQIAAGPSYMLAVTGNGVVYSFG 294
           V T G  ++  LG G +    T  S A +E++    ++ I+ G S+ LA+T N  VY++G
Sbjct: 605 VFTWGQGSN--LGCGSS--EITLFSPAVVEDLMQQMIIDISVGDSHCLALTRNCAVYAWG 660

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           S      G G     +  R  +    +G  + ++SAG  H VA
Sbjct: 661 SNGKGQCGQGHSTSPVS-RPSKVINLEGKQINQISAGTSHSVA 702



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 4/128 (3%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE--VGSVVQIAA 276
            +++  G N T  LT +G V +CG   +G+LGHG +   P    I+ L+   +  V     
Sbjct: 3429 QRIVCGQNCTFVLTSQGTVLSCGEGNYGRLGHGHSDSLPNLTMISALQGFVITQVSTSIG 3488

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + LA+T  G V+S+G G    LGHG    + +P+ I++     + V++V+ G +H  
Sbjct: 3489 SDGHSLALTETGEVFSWGDGDFGKLGHGNNERQRKPKLIESLY--DVVVIQVACGHKHSA 3546

Query: 337  ALDSSGYV 344
             L   G V
Sbjct: 3547 VLSQDGEV 3554



 Score = 61.2 bits (147), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 63/260 (24%), Positives = 96/260 (36%), Gaps = 55/260 (21%)

Query: 122  HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H+L L     VFS G    G LGHG    Q      I       V+QV+    H+A + Q
Sbjct: 3492 HSLALTETGEVFSWGDGDFGKLGHGNNERQ-RKPKLIESLYDVVVIQVACGHKHSAVLSQ 3550

Query: 181  SGQVFT-----------------------------------CGDNSSFCCGHR------- 198
             G+V+                                    CG N + C G         
Sbjct: 3551 DGEVYVFGSAEHGKLGLGGHINKKRPTKIVHKGFLNIKYIACGQNHTICIGENVVWAFGE 3610

Query: 199  --------DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH 250
                     + + I+ P+ +  L G   K+   G  FT FL+  G +++CGS+       
Sbjct: 3611 GEGGKLGIGSKKDIYVPQEIITLNGKNIKKAYCGNGFTMFLSEDGELYSCGSDNLQDATD 3670

Query: 251  GDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE 309
                ++  P+ I   E  G +V  +A GP ++L +T  G V+++G+     LG G     
Sbjct: 3671 VLYTEKLIPEKI--FEFQGQIVTDVATGPDHVLVLTARGHVWAWGNNCEGILGFGHDLPV 3728

Query: 310  LQPRAIQTFRRKGIHVVRVS 329
             +P  IQ    K I  +  S
Sbjct: 3729 QKPMIIQILSDKNIKQIATS 3748



 Score = 55.5 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 53/173 (30%), Positives = 80/173 (46%), Gaps = 7/173 (4%)

Query: 116 ITTGRYHTLLISN--SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           +  G  HTL  S   ++V+S GS   G LGHG  T +     +I       + +V+A  +
Sbjct: 536 VACGSTHTLACSRDGNTVWSFGSGDNGKLGHG-NTIRLYKPQKIEGLRHYKIKKVAAGIH 594

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
            +  +  +G+VFT G  S+  CG  +    +F P +VE L       ++ G +    LT 
Sbjct: 595 FSVALTCTGEVFTWGQGSNLGCGSSEIT--LFSPAVVEDLMQQMIIDISVGDSHCLALTR 652

Query: 234 RGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
              V+  GSN  GQ G G  T     P  +  LE    + QI+AG S+ +A T
Sbjct: 653 NCAVYAWGSNGKGQCGQGHSTSPVSRPSKVINLEG-KQINQISAGTSHSVAWT 704


>gi|298714154|emb|CBJ33856.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 669

 Score = 97.8 bits (242), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 71/206 (34%), Positives = 98/206 (47%), Gaps = 8/206 (3%)

Query: 142 LGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN 201
           +G G E    VS   +       V QV     HAA +   G++FT G       GH +  
Sbjct: 250 VGEGGEGWSDVSPVVVQGLLGLSVQQVCCGGQHAAVLTDCGEIFTWGRGGFGRLGHGN-R 308

Query: 202 RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 261
             +  PR +EAL+G+PC QV  G  +T  +T  G ++T G+  +G+LG GD  DR TP  
Sbjct: 309 EGLESPRRIEALEGIPCVQVACGFAYTAAVTASGELYTWGAGENGRLGLGDVADRHTPSR 368

Query: 262 IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 321
           +  L     V ++ AG  +   +T  G VY+F  G +   GHG+  D L PR I TF   
Sbjct: 369 VEGLHS--KVKEVYAGSVHSCVLTREGTVYAF--GKHEYTGHGDHEDVLDPRLIPTFSGG 424

Query: 322 GIHVVR---VSAGDEHVVALDSSGYV 344
              +VR   V  G  H +AL   G V
Sbjct: 425 SGALVRQISVGPGGYHTMALTCQGQV 450



 Score = 68.9 bits (167), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 59/198 (29%), Positives = 86/198 (43%), Gaps = 20/198 (10%)

Query: 161 SAAHVVQVSASEN--HAAFVLQSGQVFTCGDNSSFCCG-------HRDTNRPIF--RPRL 209
           S A V Q+S      H   +   GQV+  G N     G        R+     F   P+L
Sbjct: 425 SGALVRQISVGPGGYHTMALTCQGQVYAWGHNRVAQLGIGNSFTVPRNMEGAYFLPSPQL 484

Query: 210 VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--- 266
           VE+L G+   +V AG   +  LT+ G ++ CG N  GQLG G     P  +   P +   
Sbjct: 485 VESLVGMNIVKVVAGWGHSAALTVDGQLYVCGRNYQGQLGLGSPQGFPQNERGHPFQADF 544

Query: 267 ------EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR 320
                 +   + QIA G  + +AV  NG V+SFG+G    LGH     E  PR +Q  + 
Sbjct: 545 CLIDRLQHLKIKQIACGGEHSVAVAENGEVWSFGAGQKGQLGHESTTREDFPRLVQALKS 604

Query: 321 KGIHVVRVSAGDEHVVAL 338
               ++ V+ G+   + L
Sbjct: 605 TRREIMHVACGNNCTLVL 622



 Score = 42.4 bits (98), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 49/202 (24%), Positives = 82/202 (40%), Gaps = 27/202 (13%)

Query: 113 NMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINF-PS--------A 162
            + +  G YHT+ L     V++ G +    LG G   T   +     F PS         
Sbjct: 431 QISVGPGGYHTMALTCQGQVYAWGHNRVAQLGIGNSFTVPRNMEGAYFLPSPQLVESLVG 490

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR------------LV 210
            ++V+V A   H+A +   GQ++ CG N     G      P   P+            L+
Sbjct: 491 MNIVKVVAGWGHSAALTVDGQLYVCGRNYQ---GQLGLGSPQGFPQNERGHPFQADFCLI 547

Query: 211 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV-G 269
           + L+ +  KQ+  G   +  +   G V + G+   GQLGH  T     P+ +  L+    
Sbjct: 548 DRLQHLKIKQIACGGEHSVAVAENGEVWSFGAGQKGQLGHESTTREDFPRLVQALKSTRR 607

Query: 270 SVVQIAAGPSYMLAVTGNGVVY 291
            ++ +A G +  L + G GV +
Sbjct: 608 EIMHVACGNNCTLVLAG-GVAF 628


>gi|383865452|ref|XP_003708187.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Megachile
            rotundata]
          Length = 4755

 Score = 97.8 bits (242), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 76/231 (32%), Positives = 112/231 (48%), Gaps = 13/231 (5%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSASENHA 175
            G++   L  +  VFS G    G LGHG     C S  +   I    +  +  V+    H+
Sbjct: 3005 GKHALALTQDGRVFSWGEGEDGKLGHG----NCSSLDKPRLIESLKSKRIRDVACGSGHS 3060

Query: 176  AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTI 233
            A +  SG+++T G       GH DTN  + +P+LV++L G    QV  G     T  LT 
Sbjct: 3061 AAITSSGELYTWGLGEYGRLGHGDTNTQL-KPKLVQSLVGQRVIQVACGSRDAQTMALTA 3119

Query: 234  RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
             G V++ G    G+LG G +    TP  +  L  +G VVQI  G  + LA+T  G V+++
Sbjct: 3120 DGSVYSWGDGDFGKLGRGGSDGCYTPLLVDRLNGLG-VVQIECGAQFSLALTKYGEVWTW 3178

Query: 294  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            G G  F LGHG  H   +P  ++  R  G  V+ V+ G  H +A+  +G V
Sbjct: 3179 GKGDYFRLGHGNDHHVRKPTLVEGLR--GKKVIHVAVGALHCLAVTDTGQV 3227



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/220 (31%), Positives = 108/220 (49%), Gaps = 11/220 (5%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV--VQVSASENHAAFVLQSGQVFTC 187
             +++CG    G LG G +   C     I F S   +  V V +   HA  + Q G+VF+ 
Sbjct: 2962 KLYACGEGTNGRLGLGDDGNAC-EPKPIPFLSQYVIKKVAVHSGGKHALALTQDGRVFSW 3020

Query: 188  GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
            G+      GH + +  + +PRL+E+LK    + V  G   +  +T  G ++T G   +G+
Sbjct: 3021 GEGEDGKLGHGNCSS-LDKPRLIESLKSKRIRDVACGSGHSAAITSSGELYTWGLGEYGR 3079

Query: 248  LGHGDTLDRPTPKSIAPLEEVGS-VVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGHG 304
            LGHGDT  +  PK +  L  VG  V+Q+A G   +  +A+T +G VYS+G G    LG G
Sbjct: 3080 LGHGDTNTQLKPKLVQSL--VGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRG 3137

Query: 305  EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
                   P  +   R  G+ VV++  G +  +AL   G V
Sbjct: 3138 GSDGCYTPLLVD--RLNGLGVVQIECGAQFSLALTKYGEV 3175



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 72/236 (30%), Positives = 113/236 (47%), Gaps = 17/236 (7%)

Query: 118  TGRYHTL--LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV----VQVSAS 171
            TG   TL  + ++  V++ G    G LG G   T  V    +   S  HV    V V++ 
Sbjct: 3935 TGGEQTLFAVTADGKVYATGYGAVGRLGIG--GTDSVMMPTL-LESIQHVFVKKVAVNSG 3991

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFTGF 230
              H   +   G V++ G+      GH   NR  + RP+L+E L G     V  G + +  
Sbjct: 3992 GKHCLALSSEGHVYSWGEGDDGKLGH--GNRLSYDRPKLIEELLGTEIVDVACGGHHSAA 4049

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLAVTGNG 288
            +T  G ++T G   +G+LGHGD+ D+ TPK +  L++   V+ +A  +G +  L VT + 
Sbjct: 4050 ITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLVEALQDY-KVIDVACGSGDAQTLCVTDDD 4108

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             V+S+G G    LG G       P  I++    G+ V++V  G +  VAL  SG +
Sbjct: 4109 NVWSWGDGDYGKLGRGGSDGCKVPMKIESL--AGLGVIKVECGSQFSVALTRSGSI 4162



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 112/231 (48%), Gaps = 13/231 (5%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G+++  L  +SSV+S G+   G LGHG + T       I      ++  ++    ++A +
Sbjct: 515 GKHYLALTEDSSVYSWGNGDGGRLGHG-DRTWYEEPKLIESLVDKNITFIACGSTYSAAL 573

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG-----VPCKQVTAGLNFTGFLTI 233
             +G+++T G  +    GH +++  +  P LV AL G     V C    +G + T  +T 
Sbjct: 574 SSNGELYTWGRGNYGRLGHGNSDD-VMVPTLVSALNGHMIVYVAC---GSGDSQTLCVTA 629

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V + G   +G+LG G      TPK +  L ++ +V ++  G  +  A+T  G VY++
Sbjct: 630 SGIVFSWGDGDYGKLGRGGCNGSKTPKIVDKLLDI-NVAKVYCGGQFSAALTAYGEVYTW 688

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G G  + LGHG +     P+AI+  + K   V  +  G  HV+AL     V
Sbjct: 689 GKGEAYRLGHGNEEHVRYPKAIEALKTK--KVKELCVGSLHVLALTEDQLV 737



 Score = 79.0 bits (193), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 69/255 (27%), Positives = 115/255 (45%), Gaps = 20/255 (7%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSF 154
             L+S++H           + + +G  H L +S+   V+S G    G LGHG      +S+
Sbjct: 3974 LLESIQH------VFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNR----LSY 4023

Query: 155  TR---INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE 211
             R   I       +V V+   +H+A +  +G ++T G       GH D+   +  P+LVE
Sbjct: 4024 DRPKLIEELLGTEIVDVACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQL-TPKLVE 4082

Query: 212  ALKGVPCKQVTAGLNFTGFL--TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 269
            AL+      V  G      L  T   +V + G   +G+LG G +     P  I  L  +G
Sbjct: 4083 ALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPMKIESLAGLG 4142

Query: 270  SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
             V+++  G  + +A+T +G +Y++G G    LGHG      +PR +     +G  ++ ++
Sbjct: 4143 -VIKVECGSQFSVALTRSGSIYTWGKGDYHRLGHGTDDHVRRPRKVAAL--QGKKIISIA 4199

Query: 330  AGDEHVVALDSSGYV 344
             G  H VA    G V
Sbjct: 4200 TGSLHCVACSDKGEV 4214



 Score = 67.8 bits (164), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 84/183 (45%), Gaps = 4/183 (2%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
            S   +VQ  AS        Q   V+  G N     G    ++ I  P   E+L  +    
Sbjct: 2888 SDWEIVQEQASSQRGVETPQHSAVYVWGLNDKDQLGGLKGSK-IKLPVYSESLSKLKPVH 2946

Query: 221  VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE-VGSVVQIAAGPS 279
            +  G      ++  G ++ CG  T+G+LG GD  +   PK I  L + V   V + +G  
Sbjct: 2947 IAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDGNACEPKPIPFLSQYVIKKVAVHSGGK 3006

Query: 280  YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
            + LA+T +G V+S+G G +  LGHG      +PR I++ + K I    V+ G  H  A+ 
Sbjct: 3007 HALALTQDGRVFSWGEGEDGKLGHGNCSSLDKPRLIESLKSKRIR--DVACGSGHSAAIT 3064

Query: 340  SSG 342
            SSG
Sbjct: 3065 SSG 3067



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 62/226 (27%), Positives = 98/226 (43%), Gaps = 8/226 (3%)

Query: 115  QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS--AS 171
             +  G  H+  I++S  +++ G    G LGHG   TQ +    +       V+QV+  + 
Sbjct: 3052 DVACGSGHSAAITSSGELYTWGLGEYGRLGHGDTNTQ-LKPKLVQSLVGQRVIQVACGSR 3110

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
            +     +   G V++ GD      G R  +   + P LV+ L G+   Q+  G  F+  L
Sbjct: 3111 DAQTMALTADGSVYSWGDGDFGKLG-RGGSDGCYTPLLVDRLNGLGVVQIECGAQFSLAL 3169

Query: 232  TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            T  G V T G   + +LGHG+      P  +  L     V+ +A G  + LAVT  G VY
Sbjct: 3170 TKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRG-KKVIHVAVGALHCLAVTDTGQVY 3228

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            ++G   +   G+G      +P  +         V RVS G  H +A
Sbjct: 3229 AWGDNDHGQQGNGSTIVNKKPSLVHEL--DDARVNRVSCGSSHSIA 3272



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/230 (24%), Positives = 101/230 (43%), Gaps = 8/230 (3%)

Query: 114  MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            + +  G +H+  I+++  +++ G    G LGHG    Q ++   +       V+ V+   
Sbjct: 4038 VDVACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQ-LTPKLVEALQDYKVIDVACGS 4096

Query: 173  NHAAF--VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
              A    V     V++ GD      G R  +     P  +E+L G+   +V  G  F+  
Sbjct: 4097 GDAQTLCVTDDDNVWSWGDGDYGKLG-RGGSDGCKVPMKIESLAGLGVIKVECGSQFSVA 4155

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            LT  G ++T G   + +LGHG       P+ +A L+    ++ IA G  + +A +  G V
Sbjct: 4156 LTRSGSIYTWGKGDYHRLGHGTDDHVRRPRKVAALQG-KKIISIATGSLHCVACSDKGEV 4214

Query: 291  YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            +++G      LG G      +PR +     +G  + RV+ G  H +A  +
Sbjct: 4215 FTWGDNDEGQLGDGTTCALQRPRLVHAL--QGKKITRVACGSAHTLAWST 4262



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 3/139 (2%)

Query: 207  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            P L E+L  +   Q+T G      +T  G V+  G    G+LG G T     P  +  ++
Sbjct: 3920 PVLCESLSALRPVQLTGGEQTLFAVTADGKVYATGYGAVGRLGIGGTDSVMMPTLLESIQ 3979

Query: 267  EV-GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
             V    V + +G  + LA++  G VYS+G G +  LGHG +    +P+ I+     G  +
Sbjct: 3980 HVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLSYDRPKLIEELL--GTEI 4037

Query: 326  VRVSAGDEHVVALDSSGYV 344
            V V+ G  H  A+ S+G++
Sbjct: 4038 VDVACGGHHSAAITSAGWL 4056



 Score = 46.2 bits (108), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 7/113 (6%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  P   +S++ L  V    Q+  G   + AVT +G VY
Sbjct: 3896 GAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPV----QLTGGEQTLFAVTADGKVY 3951

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            + G G+   LG G     + P  +++ +   +  V V++G +H +AL S G+V
Sbjct: 3952 ATGYGAVGRLGIGGTDSVMMPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHV 4004



 Score = 45.4 bits (106), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 53/111 (47%), Gaps = 7/111 (6%)

Query: 237  VHTCGSNTHGQLG--HGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            V+  G N   QLG   G  +  P   +S++ L+ V     IA G   +  V+  G +Y+ 
Sbjct: 2911 VYVWGLNDKDQLGGLKGSKIKLPVYSESLSKLKPV----HIAGGSKTLFVVSQEGKLYAC 2966

Query: 294  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            G G+N  LG G+  +  +P+ I    +  I  V V +G +H +AL   G V
Sbjct: 2967 GEGTNGRLGLGDDGNACEPKPIPFLSQYVIKKVAVHSGGKHALALTQDGRV 3017



 Score = 41.6 bits (96), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 62/246 (25%), Positives = 102/246 (41%), Gaps = 24/246 (9%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P+   SLVD   + +    +  A +S N ++    R  GN+ R+            +V  
Sbjct: 549 PKLIESLVDKNITFIACGSTYSAALSSNGELYTWGR--GNYGRLGHGNSDDVMVPTLVSA 606

Query: 110 SAGNMQIT----TGRYHTLLISNSS-VFSCGSSLCGVLG----HGPETTQCVS-FTRINF 159
             G+M +     +G   TL ++ S  VFS G    G LG    +G +T + V     IN 
Sbjct: 607 LNGHMIVYVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGCNGSKTPKIVDKLLDIN- 665

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 219
                V +V      +A +   G+V+T G   ++  GH +    +  P+ +EALK    K
Sbjct: 666 -----VAKVYCGGQFSAALTAYGEVYTWGKGEAYRLGHGNEEH-VRYPKAIEALKTKKVK 719

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQL--GHGDTLDRPTPKSIAPLEEVGSVVQIAAG 277
           ++  G      LT    V+  G N +GQ+    G  +  PT   + P     +V+ +  G
Sbjct: 720 ELCVGSLHVLALTEDQLVYGWGRNDYGQIDPALGTIVSEPT---LCPTLSGKNVIGLVCG 776

Query: 278 PSYMLA 283
           P+   A
Sbjct: 777 PTQSFA 782


>gi|168050967|ref|XP_001777928.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162670688|gb|EDQ57252.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 364

 Score = 97.8 bits (242), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 66/181 (36%), Positives = 97/181 (53%), Gaps = 4/181 (2%)

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
           H  +V+A   H   +  SG V++ GD SS   GH + +     P LV++L G+   Q+  
Sbjct: 142 HFSRVAAGGYHTLALTGSGDVYSFGDGSSGALGHGNLD-GCSTPSLVKSLWGLGVTQIAC 200

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G N +  LT+ G V T G   +GQLGHG T +   P ++  L +   V+QIA G  + LA
Sbjct: 201 GENHSAALTVDGKVFTWGRGKYGQLGHGSTQNIKLPVAVKALVDH-DVIQIACGGDHTLA 259

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           +T +G ++S+G G     GHG + D L P+  Q  + +G  +V+VSAG  H V L   G 
Sbjct: 260 ITSDGRLFSWGHGLWGQTGHGTKEDVLSPK--QVHQLEGRVLVQVSAGARHTVVLLDRGE 317

Query: 344 V 344
           V
Sbjct: 318 V 318



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 105/217 (48%), Gaps = 7/217 (3%)

Query: 130 SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 189
           +V++ G    G LG G  +      T ++      +V ++AS+ H AF+   G+V+T G 
Sbjct: 3   AVYALGRGDLGQLGIGDYSDHPTP-TSLSTLVGKDIVHIAASDYHTAFLTDEGEVYTTGS 61

Query: 190 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
           N +   G R     +  P  V AL       +  G   T  +T  G + + G + +GQLG
Sbjct: 62  NDAGQLGVRGMEEQVV-PIRVAALDTHMVTHIACGFKHTVAVTETGALASWGGDEYGQLG 120

Query: 250 --HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 307
              G+ +D   P+ +    ++    ++AAG  + LA+TG+G VYSFG GS+  LGHG   
Sbjct: 121 FDSGNIVDGVQPRIVKGSRDL-HFSRVAAGGYHTLALTGSGDVYSFGDGSSGALGHGNLD 179

Query: 308 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
               P  +++    G+ V +++ G+ H  AL   G V
Sbjct: 180 GCSTPSLVKSLW--GLGVTQIACGENHSAALTVDGKV 214



 Score = 75.1 bits (183), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 60/183 (32%), Positives = 87/183 (47%), Gaps = 6/183 (3%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           ++  G YHTL ++ S  V+S G    G LGHG     C + + +       V Q++  EN
Sbjct: 145 RVAAGGYHTLALTGSGDVYSFGDGSSGALGHG-NLDGCSTPSLVKSLWGLGVTQIACGEN 203

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+A +   G+VFT G       GH  T   I  P  V+AL      Q+  G + T  +T 
Sbjct: 204 HSAALTVDGKVFTWGRGKYGQLGHGSTQN-IKLPVAVKALVDHDVIQIACGGDHTLAITS 262

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLAVTGNGVVYS 292
            G + + G    GQ GHG   D  +PK +  LE  G V VQ++AG  + + +   G VY 
Sbjct: 263 DGRLFSWGHGLWGQTGHGTKEDVLSPKQVHQLE--GRVLVQVSAGARHTVVLLDRGEVYG 320

Query: 293 FGS 295
           +G 
Sbjct: 321 WGD 323



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 64/231 (27%), Positives = 108/231 (46%), Gaps = 6/231 (2%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + I    YHT  +++   V++ GS+  G LG      Q V   R+       V  ++   
Sbjct: 38  VHIAASDYHTAFLTDEGEVYTTGSNDAGQLGVRGMEEQVVPI-RVAALDTHMVTHIACGF 96

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
            H   V ++G + + G +     G    N     +PR+V+  + +   +V AG   T  L
Sbjct: 97  KHTVAVTETGALASWGGDEYGQLGFDSGNIVDGVQPRIVKGSRDLHFSRVAAGGYHTLAL 156

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           T  G V++ G  + G LGHG+     TP  +  L  +G V QIA G ++  A+T +G V+
Sbjct: 157 TGSGDVYSFGDGSSGALGHGNLDGCSTPSLVKSLWGLG-VTQIACGENHSAALTVDGKVF 215

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           ++G G    LGHG   +   P A++        V++++ G +H +A+ S G
Sbjct: 216 TWGRGKYGQLGHGSTQNIKLPVAVKALVDH--DVIQIACGGDHTLAITSDG 264



 Score = 51.2 bits (121), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 47/154 (30%), Positives = 63/154 (40%), Gaps = 15/154 (9%)

Query: 112 GNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH------ 164
           G  QI  G  H+  L  +  VF+ G    G LGHG       S   I  P A        
Sbjct: 194 GVTQIACGENHSAALTVDGKVFTWGRGKYGQLGHG-------STQNIKLPVAVKALVDHD 246

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V+Q++   +H   +   G++F+ G       GH  T   +  P+ V  L+G    QV+AG
Sbjct: 247 VIQIACGGDHTLAITSDGRLFSWGHGLWGQTGH-GTKEDVLSPKQVHQLEGRVLVQVSAG 305

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT 258
              T  L  RG V+  G     QLG  D  D  T
Sbjct: 306 ARHTVVLLDRGEVYGWGDCEQRQLGTCDRCDFST 339


>gi|224011731|ref|XP_002295640.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|209583671|gb|ACI64357.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 277

 Score = 97.8 bits (242), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 70/234 (29%), Positives = 113/234 (48%), Gaps = 7/234 (2%)

Query: 115 QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
            +T G YHT  + SN  +++ G  + G LGHG E+       R+       +V ++    
Sbjct: 37  HVTCGSYHTAAVASNGDLYTWGGGMYGKLGHGNESGHSTP-RRVEALVGLSIVDIACGSR 95

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H A V   G ++T GD  +   GH DT    + P+L+E L G    Q++A    T  LT 
Sbjct: 96  HTAVVTSKGCLYTWGDKENGVAGHGDTEGHQYTPKLLERLNGKKVVQLSACGFHTACLTD 155

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLAVTGNGVVYS 292
                  G    G+LG+G   +  +P+ I  L  +G    Q+A G  +   +T +G +Y+
Sbjct: 156 DHETFAWGEGKFGRLGNGTERNCHSPRLIESL--IGKYPCQVACGGFHSAVITRDGKMYT 213

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSL 346
           FG G +  LGH ++ ++L+P  ++     G+ V +++ G  H VAL S G   L
Sbjct: 214 FGGGEHGQLGHADKVNKLKPTLVEAL--DGVVVKQITCGWSHSVALTSEGEYHL 265



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 2/106 (1%)

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           V + G    GQLG GDT D+  P  +  L  VG +  +  G  +  AV  NG +Y++G G
Sbjct: 1   VFSWGRGEDGQLGIGDTSDQDEPTYVDALRGVGIITHVTCGSYHTAAVASNGDLYTWGGG 60

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
               LGHG +     PR ++     G+ +V ++ G  H   + S G
Sbjct: 61  MYGKLGHGNESGHSTPRRVEAL--VGLSIVDIACGSRHTAVVTSKG 104



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 60/126 (47%), Gaps = 3/126 (2%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++   +HT  L  +   F+ G    G LG+G E   C S   I      +  QV+   
Sbjct: 141 VQLSACGFHTACLTDDHETFAWGEGKFGRLGNGTER-NCHSPRLIESLIGKYPCQVACGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+A + + G+++T G       GH D    + +P LVEAL GV  KQ+T G + +  LT
Sbjct: 200 FHSAVITRDGKMYTFGGGEHGQLGHADKVNKL-KPTLVEALDGVVVKQITCGWSHSVALT 258

Query: 233 IRGHVH 238
             G  H
Sbjct: 259 SEGEYH 264


>gi|328784403|ref|XP_395217.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Apis
           mellifera]
          Length = 1081

 Score = 97.8 bits (242), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 68/221 (30%), Positives = 109/221 (49%), Gaps = 9/221 (4%)

Query: 127 SNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAFVLQSGQVF 185
               +F  GS++ G LG G    + +   R ++F  AA + Q++  EN+   + Q G+++
Sbjct: 24  KKKDMFCWGSTIHGELGLGGIEDENILIPRELDFKKAAEIQQIACGENYTVVITQIGEIY 83

Query: 186 TCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH 245
           +CG+N     GH    +   R +L+  L     K+   G   T  +   G + + GSNT 
Sbjct: 84  SCGNNDYGQLGHEKGRK---RLQLIPGLDAFVFKKAACGAYHTLAINEWGQLFSWGSNTE 140

Query: 246 GQLG-HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG 304
           GQLG +       +P+ +  L     VVQIA G  +  A+T NG +YS+GS S   LG G
Sbjct: 141 GQLGLNSKNFMESSPRMVKTL-GTSVVVQIACGMKHAFALTNNGELYSWGSNSEGQLGLG 199

Query: 305 -EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            +   E++P+ I  F   GI +  ++ G  H +A+  SG V
Sbjct: 200 TDTKYEIKPKFISAFI--GIPIAFIACGGYHSIAISKSGAV 238



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 66/221 (29%), Positives = 104/221 (47%), Gaps = 4/221 (1%)

Query: 119 GRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 177
           G YHTL I+    +FS GS+  G LG   +     S   +     + VVQ++    HA  
Sbjct: 119 GAYHTLAINEWGQLFSWGSNTEGQLGLNSKNFMESSPRMVKTLGTSVVVQIACGMKHAFA 178

Query: 178 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
           +  +G++++ G NS    G     +   +P+ + A  G+P   +  G   +  ++  G V
Sbjct: 179 LTNNGELYSWGSNSEGQLGLGTDTKYEIKPKFISAFIGIPIAFIACGGYHSIAISKSGAV 238

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
              G NT GQLG  DT DR  P  +  L+    +   A G  + + +T +G V++ G+G 
Sbjct: 239 FGWGKNTFGQLGLNDTQDRNLPCQLQTLQN-AKICYAACGEEFSVFLTVDGGVFTCGAGM 297

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
              LGHG   +E+ PR  Q     G  V ++S G  H +AL
Sbjct: 298 YGQLGHGSNSNEILPR--QVMELMGSTVTQISCGKRHTLAL 336



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 64/149 (42%), Gaps = 4/149 (2%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G YH++ IS S +VF  G +  G LG      + +   ++     A +   +  E  
Sbjct: 222 IACGGYHSIAISKSGAVFGWGKNTFGQLGLNDTQDRNLP-CQLQTLQNAKICYAACGEEF 280

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFLTI 233
           + F+   G VFTCG       GH   +  I  PR V  L G    Q++ G   T   +  
Sbjct: 281 SVFLTVDGGVFTCGAGMYGQLGHGSNSNEIL-PRQVMELMGSTVTQISCGKRHTLALVPS 339

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           RG V+  G    GQLG+  T    TP+ +
Sbjct: 340 RGRVYAWGLGGAGQLGNHSTRSVTTPQVV 368


>gi|320163091|gb|EFW39990.1| chromosome condensation regulator RCC1 [Capsaspora owczarzaki ATCC
           30864]
          Length = 1230

 Score = 97.4 bits (241), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 80/257 (31%), Positives = 108/257 (42%), Gaps = 40/257 (15%)

Query: 115 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA---------- 163
           QI  G  H+L L SN  VF+ G +    LG  P  +     TR + P  A          
Sbjct: 177 QIACGETHSLALTSNGQVFAWGDNKASQLGLTPSESSRQPSTRSSAPKTAAASIDDVDEL 236

Query: 164 -----------------------HVVQVSASENHAAFVLQSGQVFTCGDNSS-FCCGHRD 199
                                   +VQ+    N +  + + G VF  GDN+S   C    
Sbjct: 237 DAATLAYMDFMTRPRLVRALTGHKIVQIVCGANFSLVLSERGDVFAWGDNTSGQLCLREL 296

Query: 200 TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP 259
              P+  P LV+ L G+P +Q+ AG   T  LT  G V++ G+N  GQLG GDT     P
Sbjct: 297 KTVPV--PTLVKELYGIPIRQLAAGGRHTLALTFNGQVYSWGNNQFGQLGVGDTAPHTIP 354

Query: 260 KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
             +  LE       IA G  + + +T  G VYSFG+G    LGHG   +E+ PR I  F 
Sbjct: 355 SRLKTLEH-QFCAHIACGEDHSVVLTETGGVYSFGAGGQGQLGHGTLQNEINPRMI--FE 411

Query: 320 RKGIHVVRVSAGDEHVV 336
             G    +V  G  H +
Sbjct: 412 LMGKSASQVLCGRRHTI 428



 Score = 97.4 bits (241), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 77/262 (29%), Positives = 116/262 (44%), Gaps = 39/262 (14%)

Query: 116 ITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHA 175
           I  GR HTL + +  V+SCGS+  G LGH    ++     R++      + Q++  E H+
Sbjct: 129 IACGRAHTLFLVDGQVYSCGSNDQGQLGHKKHRSKP---ERVDALEPYTITQIACGETHS 185

Query: 176 AFVLQSGQVFTCGDNSSFCCG---HRDTNRP----------------------------- 203
             +  +GQVF  GDN +   G      + +P                             
Sbjct: 186 LALTSNGQVFAWGDNKASQLGLTPSESSRQPSTRSSAPKTAAASIDDVDELDAATLAYMD 245

Query: 204 -IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
            + RPRLV AL G    Q+  G NF+  L+ RG V   G NT GQL   +    P P  +
Sbjct: 246 FMTRPRLVRALTGHKIVQIVCGANFSLVLSERGDVFAWGDNTSGQLCLRELKTVPVPTLV 305

Query: 263 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
             L  +  + Q+AAG  + LA+T NG VYS+G+     LG G+      P  ++T   + 
Sbjct: 306 KELYGI-PIRQLAAGGRHTLALTFNGQVYSWGNNQFGQLGVGDTAPHTIPSRLKTLEHQ- 363

Query: 323 IHVVRVSAGDEHVVALDSSGYV 344
                ++ G++H V L  +G V
Sbjct: 364 -FCAHIACGEDHSVVLTETGGV 384


>gi|312792299|ref|YP_004025222.1| regulator of chromosome condensation rcc1 [Caldicellulosiruptor
           kristjanssonii 177R1B]
 gi|312179439|gb|ADQ39609.1| regulator of chromosome condensation RCC1 [Caldicellulosiruptor
           kristjanssonii 177R1B]
          Length = 754

 Score = 97.4 bits (241), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 66/232 (28%), Positives = 119/232 (51%), Gaps = 14/232 (6%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + I  GRYH+L L  + +V++ G++  G LG+G       S+  +   +   VV ++A E
Sbjct: 250 VAIAAGRYHSLALKKDGTVWAWGNNYYGQLGNGKSED---SYDPVQVKNLKDVVAIAAGE 306

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           NH+  + + G ++  GDN     G+  + + +  P   ++LK V    + AG   +  L 
Sbjct: 307 NHSLALKKDGTIWAWGDNEWGQLGNSISEK-LCVPVQFKSLKDVVA--IAAGCEHSLALK 363

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G V + G+N +GQLG+G+++D   P  +  L++   VV IA G ++ LA+  +G V++
Sbjct: 364 KDGTVWSWGNNYYGQLGNGNSIDSYVPVQVRGLKD---VVAIATGNAHSLALKKDGTVWA 420

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           +G+     LG+G       P  ++  +     VV ++AG +H +A    G V
Sbjct: 421 WGNNEFGQLGNGTNKSSFVPVQVKGLK----DVVAIAAGSDHSLAFKKDGTV 468



 Score = 77.8 bits (190), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 68/232 (29%), Positives = 100/232 (43%), Gaps = 13/232 (5%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QI  G YH+L L  + +V++ G +  G  G     T+  S   +       VV ++A  
Sbjct: 49  IQIAAGNYHSLALKGDGTVWAWGWNHWGQCG-----TEESSIIPVKVKGLKDVVAIAAGR 103

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  + + G V+  G N     G+RD       P  V+ LK V    + AG  ++  L 
Sbjct: 104 YHSLTLKKDGTVWAWGSNKDGQLGNRDAGEYSIVPVQVKGLKDVVA--IAAGDGYSLGLK 161

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G V   G N   Q+  G   D   P  I  L++   VV IAAG  Y LA+  +G V+ 
Sbjct: 162 KDGTVWCWGLNESIQVIDGSNKDFSVPFQIKGLKD---VVAIAAGKDYSLALKKDGTVWM 218

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           +    N+        DE  P  +Q    K   VV ++AG  H +AL   G V
Sbjct: 219 WEYKYNYYEQLRRGADEYSPVPVQVEGLK--DVVAIAAGRYHSLALKKDGTV 268



 Score = 75.5 bits (184), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 109/234 (46%), Gaps = 15/234 (6%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + I  GRYH+L L  + +V++ GS+  G LG+        S   +       VV ++A +
Sbjct: 97  VAIAAGRYHSLTLKKDGTVWAWGSNKDGQLGN--RDAGEYSIVPVQVKGLKDVVAIAAGD 154

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            ++  + + G V+  G N S       +N+    P  ++ LK V    + AG +++  L 
Sbjct: 155 GYSLGLKKDGTVWCWGLNESIQV-IDGSNKDFSVPFQIKGLKDVVA--IAAGKDYSLALK 211

Query: 233 IRGHVHTC--GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
             G V       N + QL  G     P P  +  L++V   V IAAG  + LA+  +G V
Sbjct: 212 KDGTVWMWEYKYNYYEQLRRGADEYSPVPVQVEGLKDV---VAIAAGRYHSLALKKDGTV 268

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           +++G+     LG+G+  D   P  ++  +     VV ++AG+ H +AL   G +
Sbjct: 269 WAWGNNYYGQLGNGKSEDSYDPVQVKNLK----DVVAIAAGENHSLALKKDGTI 318



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 66/236 (27%), Positives = 113/236 (47%), Gaps = 20/236 (8%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + I  G  H+L L  + +V+S G++  G LG+G       S+  +       VV ++   
Sbjct: 350 VAIAAGCEHSLALKKDGTVWSWGNNYYGQLGNGNSID---SYVPVQVRGLKDVVAIATGN 406

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  + + G V+  G+N     G+  TN+  F P  V+ LK V    + AG + +    
Sbjct: 407 AHSLALKKDGTVWAWGNNEFGQLGN-GTNKSSFVPVQVKGLKDVVA--IAAGSDHSLAFK 463

Query: 233 IRGHVHTCGSNTHGQLGHGDT---LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             G V   G+N  GQLG+G          P  +  L++V   V +AAG  + LA+  +G 
Sbjct: 464 KDGTVWAWGNNEFGQLGNGSGGYGQYYAVPVQVKGLKDV---VAVAAGSVHSLALKKDGT 520

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH-VVRVSAGDEHVVALDSSGYV 344
           ++++  GSN+   HG   ++++ R+    + KG+  VV ++AG  H + L   G V
Sbjct: 521 IWAW--GSNY---HGLLGNDIE-RSFVPVQVKGLKDVVAIAAGSNHSLVLKKDGTV 570



 Score = 64.7 bits (156), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 88/187 (47%), Gaps = 17/187 (9%)

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
           +++Q++A   H+  +   G V+  G N    CG  +++     P  V+ LK V    + A
Sbjct: 47  NIIQIAAGNYHSLALKGDGTVWAWGWNHWGQCGTEESS---IIPVKVKGLKDVVA--IAA 101

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG--SVVQIAAGPSYM 281
           G   +  L   G V   GSN  GQLG+ D  +     SI P++  G   VV IAAG  Y 
Sbjct: 102 GRYHSLTLKKDGTVWAWGSNKDGQLGNRDAGEY----SIVPVQVKGLKDVVAIAAGDGYS 157

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH-VVRVSAGDEHVVALDS 340
           L +  +G V+ +G   +  +  G   D   P     F+ KG+  VV ++AG ++ +AL  
Sbjct: 158 LGLKKDGTVWCWGLNESIQVIDGSNKDFSVP-----FQIKGLKDVVAIAAGKDYSLALKK 212

Query: 341 SGYVSLC 347
            G V + 
Sbjct: 213 DGTVWMW 219



 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/193 (23%), Positives = 88/193 (45%), Gaps = 7/193 (3%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCV-SFTRINFPSAAHVVQVSAS 171
           + I  G  H+L++  + +V++ G     +L    E ++ V S   +       VV ++A 
Sbjct: 552 VAIAAGSNHSLVLKKDGTVWAWGEVWFDLLN---ENSRLVYSSVPVQIKGLKDVVAIAAG 608

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           E+H+  + + G V+  GDN     G+    +    P  V+ LK +    +  G   +  +
Sbjct: 609 EHHSLGLKKDGTVWAWGDNFFGQLGNSPREKYSLVPVQVKGLKDILA--IATGEWHSLAI 666

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
              G V   G N+ GQLG+  +           ++ +  V+ I+AG  + LA+  +G V+
Sbjct: 667 KKDGTVWAWGENSTGQLGNETSGKDKYSYVPVQVKGIKDVLAISAGSYHSLALKKDGTVW 726

Query: 292 SFGSGSNFCLGHG 304
            +G+ +   LG+G
Sbjct: 727 GWGANARGQLGNG 739


>gi|115446671|ref|NP_001047115.1| Os02g0554100 [Oryza sativa Japonica Group]
 gi|50725773|dbj|BAD33304.1| putative UVB-resistance protein (UVR8) [Oryza sativa Japonica
           Group]
 gi|113536646|dbj|BAF09029.1| Os02g0554100 [Oryza sativa Japonica Group]
 gi|215697683|dbj|BAG91677.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 453

 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 73/234 (31%), Positives = 117/234 (50%), Gaps = 9/234 (3%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRI----NFPSAAHVVQVSA 170
           I+ G  H++ L+S   V S G    G LGHG    + V         + P     V +  
Sbjct: 30  ISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLTAAFDDAPGGVASVVICG 89

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
           +++  A+  +  Q+++ G       GH +++  +F P+ ++AL+GV   Q+  G +    
Sbjct: 90  ADHTTAYSDEELQLYSWGWGDFGRLGHGNSSD-VFNPQPIQALQGVRITQIACGDSHCLA 148

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           +T+ GHVH+ G N +GQLG G+T D   P+ I   E V  V  IAAG  +  AVT +G +
Sbjct: 149 VTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQAFEGV-RVKMIAAGAEHTAAVTEDGDL 207

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           Y +G G    LG G++ D L P  + +    G  +V V+ G  H + + SSG +
Sbjct: 208 YGWGWGRYGNLGLGDRDDRLIPEKVSSV--NGQKMVLVACGWRHTITVSSSGSI 259



 Score = 78.6 bits (192), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 60/182 (32%), Positives = 89/182 (48%), Gaps = 7/182 (3%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRP---IFRPRLVEALKGVPCKQ 220
           VV +SA  +H+  +L  G V + G       GH D  +RP   +      +A  GV    
Sbjct: 27  VVLISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLTAAFDDAPGGVASVV 86

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           +    + T +      +++ G    G+LGHG++ D   P+ I  L+ V  + QIA G S+
Sbjct: 87  ICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQPIQALQGV-RITQIACGDSH 145

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            LAVT  G V+S+G   N  LG G   D L P+ IQ F  +G+ V  ++AG EH  A+  
Sbjct: 146 CLAVTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQAF--EGVRVKMIAAGAEHTAAVTE 203

Query: 341 SG 342
            G
Sbjct: 204 DG 205



 Score = 77.8 bits (190), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 96/209 (45%), Gaps = 6/209 (2%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G  HT  ++ +  ++  G    G LG G    + +   +++  +   +V V+    H
Sbjct: 191 IAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDDRLIP-EKVSSVNGQKMVLVACGWRH 249

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V  SG ++T G +     GH D    +  P  +EALK     Q++ G   T  L   
Sbjct: 250 TITVSSSGSIYTYGWSKYGQLGHGDFEDHLV-PHKLEALKDTTISQISGGWRHTMALAAD 308

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
           G ++  G N  GQ+G GD  D  +P  +  P E+   VVQ+A G  + LA+T    V+S+
Sbjct: 309 GKLYGWGWNKFGQVGVGDNEDHCSPVQVNFPNEQ--KVVQVACGWRHTLALTEAKNVFSW 366

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           G G++  LGHGE  D   P+ I      G
Sbjct: 367 GRGTSGQLGHGEIVDRNIPKMIDALSSDG 395



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/227 (28%), Positives = 103/227 (45%), Gaps = 10/227 (4%)

Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI  G  H L ++ +  V S G +  G LG G  T   +   +I       V  ++A   
Sbjct: 138 QIACGDSHCLAVTVAGHVHSWGRNQNGQLGLG-NTEDSLLPQKIQAFEGVRVKMIAAGAE 196

Query: 174 HAAFVLQSGQVFTCGDN--SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           H A V + G ++  G     +   G RD +R I  P  V ++ G     V  G   T  +
Sbjct: 197 HTAAVTEDGDLYGWGWGRYGNLGLGDRD-DRLI--PEKVSSVNGQKMVLVACGWRHTITV 253

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           +  G ++T G + +GQLGHGD  D   P  +  L++  ++ QI+ G  + +A+  +G +Y
Sbjct: 254 SSSGSIYTYGWSKYGQLGHGDFEDHLVPHKLEALKDT-TISQISGGWRHTMALAADGKLY 312

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            +G      +G G+  D   P  +Q        VV+V+ G  H +AL
Sbjct: 313 GWGWNKFGQVGVGDNEDHCSP--VQVNFPNEQKVVQVACGWRHTLAL 357



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 48/156 (30%), Positives = 67/156 (42%), Gaps = 3/156 (1%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HT+ +S+S S+++ G S  G LGHG      V   ++       + Q+S    H
Sbjct: 243 VACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFEDHLVPH-KLEALKDTTISQISGGWRH 301

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              +   G+++  G N     G  D N     P  V         QV  G   T  LT  
Sbjct: 302 TMALAADGKLYGWGWNKFGQVGVGD-NEDHCSPVQVNFPNEQKVVQVACGWRHTLALTEA 360

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 270
            +V + G  T GQLGHG+ +DR  PK I  L   GS
Sbjct: 361 KNVFSWGRGTSGQLGHGEIVDRNIPKMIDALSSDGS 396


>gi|218190962|gb|EEC73389.1| hypothetical protein OsI_07634 [Oryza sativa Indica Group]
          Length = 448

 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 73/234 (31%), Positives = 117/234 (50%), Gaps = 9/234 (3%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRI----NFPSAAHVVQVSA 170
           I+ G  H++ L+S   V S G    G LGHG    + V         + P     V +  
Sbjct: 25  ISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLTAAFDDAPGGVASVVICG 84

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
           +++  A+  +  Q+++ G       GH +++  +F P+ ++AL+GV   Q+  G +    
Sbjct: 85  ADHTTAYSDEELQLYSWGWGDFGRLGHGNSSD-VFNPQPIQALQGVRITQIACGDSHCLA 143

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           +T+ GHVH+ G N +GQLG G+T D   P+ I   E V  V  IAAG  +  AVT +G +
Sbjct: 144 VTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQAFEGV-RVKMIAAGAEHTAAVTEDGDL 202

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           Y +G G    LG G++ D L P  + +    G  +V V+ G  H + + SSG +
Sbjct: 203 YGWGWGRYGNLGLGDRDDRLIPEKVSSV--NGQKMVLVACGWRHTITVSSSGSI 254



 Score = 78.2 bits (191), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 60/182 (32%), Positives = 89/182 (48%), Gaps = 7/182 (3%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRP---IFRPRLVEALKGVPCKQ 220
           VV +SA  +H+  +L  G V + G       GH D  +RP   +      +A  GV    
Sbjct: 22  VVLISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLTAAFDDAPGGVASVV 81

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           +    + T +      +++ G    G+LGHG++ D   P+ I  L+ V  + QIA G S+
Sbjct: 82  ICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQPIQALQGV-RITQIACGDSH 140

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            LAVT  G V+S+G   N  LG G   D L P+ IQ F  +G+ V  ++AG EH  A+  
Sbjct: 141 CLAVTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQAF--EGVRVKMIAAGAEHTAAVTE 198

Query: 341 SG 342
            G
Sbjct: 199 DG 200



 Score = 77.8 bits (190), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 96/209 (45%), Gaps = 6/209 (2%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G  HT  ++ +  ++  G    G LG G    + +   +++  +   +V V+    H
Sbjct: 186 IAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDDRLIP-EKVSSVNGQKMVLVACGWRH 244

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V  SG ++T G +     GH D    +  P  +EALK     Q++ G   T  L   
Sbjct: 245 TITVSSSGSIYTYGWSKYGQLGHGDFEDHLV-PHKLEALKDTTISQISGGWRHTMALAAD 303

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
           G ++  G N  GQ+G GD  D  +P  +  P E+   VVQ+A G  + LA+T    V+S+
Sbjct: 304 GKLYGWGWNKFGQVGVGDNEDHCSPVQVNFPNEQ--KVVQVACGWRHTLALTEAKNVFSW 361

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           G G++  LGHGE  D   P+ I      G
Sbjct: 362 GRGTSGQLGHGEIVDRNIPKMIDALSSDG 390



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/227 (28%), Positives = 103/227 (45%), Gaps = 10/227 (4%)

Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI  G  H L ++ +  V S G +  G LG G  T   +   +I       V  ++A   
Sbjct: 133 QIACGDSHCLAVTVAGHVHSWGRNQNGQLGLG-NTEDSLLPQKIQAFEGVRVKMIAAGAE 191

Query: 174 HAAFVLQSGQVFTCGDN--SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           H A V + G ++  G     +   G RD +R I  P  V ++ G     V  G   T  +
Sbjct: 192 HTAAVTEDGDLYGWGWGRYGNLGLGDRD-DRLI--PEKVSSVNGQKMVLVACGWRHTITV 248

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           +  G ++T G + +GQLGHGD  D   P  +  L++  ++ QI+ G  + +A+  +G +Y
Sbjct: 249 SSSGSIYTYGWSKYGQLGHGDFEDHLVPHKLEALKDT-TISQISGGWRHTMALAADGKLY 307

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            +G      +G G+  D   P  +Q        VV+V+ G  H +AL
Sbjct: 308 GWGWNKFGQVGVGDNEDHCSP--VQVNFPNEQKVVQVACGWRHTLAL 352



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 48/156 (30%), Positives = 67/156 (42%), Gaps = 3/156 (1%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HT+ +S+S S+++ G S  G LGHG      V   ++       + Q+S    H
Sbjct: 238 VACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFEDHLVPH-KLEALKDTTISQISGGWRH 296

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              +   G+++  G N     G  D N     P  V         QV  G   T  LT  
Sbjct: 297 TMALAADGKLYGWGWNKFGQVGVGD-NEDHCSPVQVNFPNEQKVVQVACGWRHTLALTEA 355

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 270
            +V + G  T GQLGHG+ +DR  PK I  L   GS
Sbjct: 356 KNVFSWGRGTSGQLGHGEIVDRNIPKMIDALSSDGS 391


>gi|260786461|ref|XP_002588276.1| hypothetical protein BRAFLDRAFT_124709 [Branchiostoma floridae]
 gi|229273436|gb|EEN44287.1| hypothetical protein BRAFLDRAFT_124709 [Branchiostoma floridae]
          Length = 1914

 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 100/200 (50%), Gaps = 6/200 (3%)

Query: 149 TQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRP 207
           T  ++ T I  P+   + QV+    H   V     V+T G+ S    GH D   R   +P
Sbjct: 627 TCAMTLTPIELPAKIKIRQVAVGLEHMVVVAMERAVYTWGEGSKGQLGHGDLLGR--SKP 684

Query: 208 RLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE 267
            +VEALKG    +   G  F+ F++  G V TCG  ++G LGHGD +    P+ I PL  
Sbjct: 685 EMVEALKGKSIVRACCGDGFSVFVSDNGIVMTCGDGSNGCLGHGDWMSASRPRLIEPLLS 744

Query: 268 VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR 327
           V  V  I+ GP +++AV  +G V+++G G + CLG G++ D   P+ +Q    + + +  
Sbjct: 745 V-DVRAISCGPHHVVAVGSDGEVFAWGRGKHGCLGLGDEEDHFSPQEVQI--SEPVFIRE 801

Query: 328 VSAGDEHVVALDSSGYVSLC 347
           V  G +  + L   G V  C
Sbjct: 802 VKCGVDGTMFLTDMGSVLAC 821



 Score = 57.8 bits (138), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 92/228 (40%), Gaps = 19/228 (8%)

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSASENHAAFVL 179
           +   +  N  V +CG    G LGHG   +   S  R+  P  +  V  +S   +H   V 
Sbjct: 704 FSVFVSDNGIVMTCGDGSNGCLGHGDWMS--ASRPRLIEPLLSVDVRAISCGPHHVVAVG 761

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             G+VF  G     C G  D     F P+ V+  + V  ++V  G++ T FLT  G V  
Sbjct: 762 SDGEVFAWGRGKHGCLGLGD-EEDHFSPQEVQISEPVFIREVKCGVDGTMFLTDMGSVLA 820

Query: 240 CGSNTHGQLG--HGDTLDRPTP----KSIAPLEEVGSVVQ---------IAAGPSYMLAV 284
           CG+N + +LG  H     R       K   P  +V +VV+         +A GP +   +
Sbjct: 821 CGNNENNKLGLNHRQGFLRAMKNLLQKVEVPGRKVPTVVRALTNHRAIDMAVGPHHTSVL 880

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
              G VY+FG      LG G       P  ++        V  ++ GD
Sbjct: 881 VEPGKVYTFGRNLEGQLGTGHTKPRDAPMEVKDLSISDKTVTMLACGD 928



 Score = 45.1 bits (105), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 60/256 (23%), Positives = 96/256 (37%), Gaps = 28/256 (10%)

Query: 116  ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I+ G +H + + S+  VF+ G    G LG G E     S   +       + +V    + 
Sbjct: 750  ISCGPHHVVAVGSDGEVFAWGRGKHGCLGLGDEEDH-FSPQEVQISEPVFIREVKCGVDG 808

Query: 175  AAFVLQSGQVFTCGDNSSFCCG--HRDTNRPIFR-------------PRLVEALKGVPCK 219
              F+   G V  CG+N +   G  HR       +             P +V AL      
Sbjct: 809  TMFLTDMGSVLACGNNENNKLGLNHRQGFLRAMKNLLQKVEVPGRKVPTVVRALTNHRAI 868

Query: 220  QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE-EVGSVVQIAAGP 278
             +  G + T  L   G V+T G N  GQLG G T  R  P  +  L     +V  +A G 
Sbjct: 869  DMAVGPHHTSVLVEPGKVYTFGRNLEGQLGTGHTKPRDAPMEVKDLSISDKTVTMLACGD 928

Query: 279  SYM-LAVTGNGVVYSFGS---------GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 328
             +  + +     ++ +G+          +N     G    E Q  A    RR   ++   
Sbjct: 929  MFTAVGINSENALFFWGTRYRPKDKPEENNNQSAEGAGAGEEQDHAPIGHRRNSSNISIT 988

Query: 329  SAGDEHVVALDSSGYV 344
            SAG  + +A++S  + 
Sbjct: 989  SAGSVNNIAVESRAHT 1004


>gi|156396932|ref|XP_001637646.1| predicted protein [Nematostella vectensis]
 gi|156224760|gb|EDO45583.1| predicted protein [Nematostella vectensis]
          Length = 1345

 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 126/244 (51%), Gaps = 10/244 (4%)

Query: 106 IVETSAGNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH 164
           + ++ A   Q+  G+  T ++  N ++ +CG    G LG G  +    + + I+      
Sbjct: 513 VTKSLASAQQVVCGQNCTFVVQVNGTILACGEGSYGRLGMG-NSDDLFTLSPISALQGYV 571

Query: 165 VVQVS---ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
           V+Q++    S+ H+  +  SG+VF+ GD      GH +++R   RPR +EAL+G     +
Sbjct: 572 VIQIATSRGSDGHSLALTDSGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALRGEEVVNM 630

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
             G   +  +T+ G + T G+  +G+LGHG++ ++ TP+ +  LE+  ++ Q+A G ++ 
Sbjct: 631 ACGFKHSAVVTVDGKLFTFGNGDYGRLGHGNSANKKTPERVTALEK-HAIGQVACGLNHT 689

Query: 282 LAVTGNG-VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           L ++ +G  V++FG G    LG G    +  P+AI      GI   ++  G +  V L +
Sbjct: 690 LVLSADGNTVWAFGDGDYGKLGLGSCTAKTSPQAIDVL--AGIGCKKICCGTQFSVVLTN 747

Query: 341 SGYV 344
            G V
Sbjct: 748 DGRV 751


>gi|322795632|gb|EFZ18311.1| hypothetical protein SINV_02346 [Solenopsis invicta]
          Length = 3628

 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 72/231 (31%), Positives = 112/231 (48%), Gaps = 13/231 (5%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSASENHA 175
            G++   L  +  VFS G    G LGHG     C+S  +   I    +  +  ++    H+
Sbjct: 2685 GKHALALTQDGKVFSWGEGEDGKLGHG----NCISLDKPKLIEILKSKRIRDIACGSGHS 2740

Query: 176  AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTI 233
            A +  +G+++T G       GH DT     RP+LV+AL G    QV  G     T  LT 
Sbjct: 2741 AAIASNGELYTWGLGEYGRLGHGDTITQT-RPKLVQALVGQRVVQVACGSRDAQTMALTT 2799

Query: 234  RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
             G V++ G    G+LG G +    TP ++  L  +G V+Q+  G  + LA+T  G V+++
Sbjct: 2800 DGCVYSWGDGDFGKLGRGGSDGCYTPLAVDRLNGLG-VIQVECGAQFSLALTKYGEVWTW 2858

Query: 294  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            G G  F LGHG  H   +P  ++  R  G  ++ V+ G  H +A+  +G V
Sbjct: 2859 GKGDYFRLGHGNDHHVRKPTLVEGLR--GKKIIHVAVGALHCLAVTDTGQV 2907



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 112/228 (49%), Gaps = 7/228 (3%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G+++  L  +  V+S G+   G LGHG +T        I      ++V ++    ++A +
Sbjct: 156 GKHYLALTQDGCVYSWGNGDGGRLGHG-DTVSYDEPKLIESLLDKNIVFIACGSTYSAAL 214

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL--TIRGH 236
             SG+++T G  +    GH + +  +  P LV  LKG     V  G   +  L  T  G 
Sbjct: 215 SASGELYTWGRGNYGRLGHGNFDD-VLTPTLVTTLKGHTVVHVACGSGDSQTLCVTASGI 273

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           V + G   +G+LG G T    TPK +  L ++ +VV++  G  +  A+T +G VY++G G
Sbjct: 274 VFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDI-NVVKVFCGGQFSAALTAHGEVYTWGKG 332

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             + LGHG +     P+ I++ R K I    +S G  H++AL    +V
Sbjct: 333 DAYRLGHGSEEHVRYPKVIESLRDKKIK--DLSVGTTHILALTEDQFV 378



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 73/233 (31%), Positives = 110/233 (47%), Gaps = 13/233 (5%)

Query: 119  GRYHTLLI--SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS--AAHVVQVSASENH 174
            G   TL I      +++CG    G LG G +   C     I F S      V V +   H
Sbjct: 2629 GGSKTLFIVSQEGKLYACGEGTNGRLGLGDDNNVC-EPKAIPFLSQFVIKKVAVHSGGKH 2687

Query: 175  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
            A  + Q G+VF+ G+      GH +    + +P+L+E LK    + +  G   +  +   
Sbjct: 2688 ALALTQDGKVFSWGEGEDGKLGHGNCIS-LDKPKLIEILKSKRIRDIACGSGHSAAIASN 2746

Query: 235  GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAG--PSYMLAVTGNGVVY 291
            G ++T G   +G+LGHGDT+ +  PK +  L  VG  VVQ+A G   +  +A+T +G VY
Sbjct: 2747 GELYTWGLGEYGRLGHGDTITQTRPKLVQAL--VGQRVVQVACGSRDAQTMALTTDGCVY 2804

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            S+G G    LG G       P A+   R  G+ V++V  G +  +AL   G V
Sbjct: 2805 SWGDGDFGKLGRGGSDGCYTPLAVD--RLNGLGVIQVECGAQFSLALTKYGEV 2855



 Score = 68.6 bits (166), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 54/177 (30%), Positives = 85/177 (48%), Gaps = 6/177 (3%)

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
           A   H   + Q G V++ G+      GH DT      P+L+E+L       +  G  ++ 
Sbjct: 154 ADGKHYLALTQDGCVYSWGNGDGGRLGHGDT-VSYDEPKLIESLLDKNIVFIACGSTYSA 212

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLAVTGN 287
            L+  G ++T G   +G+LGHG+  D  TP  +  L+   +VV +A  +G S  L VT +
Sbjct: 213 ALSASGELYTWGRGNYGRLGHGNFDDVLTPTLVTTLKG-HTVVHVACGSGDSQTLCVTAS 271

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G+V+S+G G    LG G       P+ +       I+VV+V  G +   AL + G V
Sbjct: 272 GIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLL--DINVVKVFCGGQFSAALTAHGEV 326



 Score = 67.8 bits (164), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 92/200 (46%), Gaps = 14/200 (7%)

Query: 155  TRINFPSAAHV------VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR 208
            ++I  P  + V      + ++        V Q G+++ CG+ ++   G  D N  +  P+
Sbjct: 2608 SKIKLPIYSEVLSKLKPIHIAGGSKTLFIVSQEGKLYACGEGTNGRLGLGDDNN-VCEPK 2666

Query: 209  LVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
             +  L     K+V   +G      LT  G V + G    G+LGHG+ +    PK I  L+
Sbjct: 2667 AIPFLSQFVIKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNCISLDKPKLIEILK 2726

Query: 267  EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
                +  IA G  +  A+  NG +Y++G G    LGHG+   + +P+ +Q     G  VV
Sbjct: 2727 S-KRIRDIACGSGHSAAIASNGELYTWGLGEYGRLGHGDTITQTRPKLVQAL--VGQRVV 2783

Query: 327  RVSAG--DEHVVALDSSGYV 344
            +V+ G  D   +AL + G V
Sbjct: 2784 QVACGSRDAQTMALTTDGCV 2803



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 98/228 (42%), Gaps = 14/228 (6%)

Query: 116  ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA---AHVVQVS-- 169
            I  G  H+  I SN  +++ G    G LGHG   TQ    TR     A     VVQV+  
Sbjct: 2733 IACGSGHSAAIASNGELYTWGLGEYGRLGHGDTITQ----TRPKLVQALVGQRVVQVACG 2788

Query: 170  ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            + +     +   G V++ GD      G R  +   + P  V+ L G+   QV  G  F+ 
Sbjct: 2789 SRDAQTMALTTDGCVYSWGDGDFGKLG-RGGSDGCYTPLAVDRLNGLGVIQVECGAQFSL 2847

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             LT  G V T G   + +LGHG+      P  +  L     ++ +A G  + LAVT  G 
Sbjct: 2848 ALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRG-KKIIHVAVGALHCLAVTDTGQ 2906

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            VY++G   +   G+G      +P  +     +   V RVS G  H +A
Sbjct: 2907 VYAWGDNDHGQQGNGATSVNRKPSLVHDL--EDARVNRVSCGSSHSIA 2952



 Score = 45.4 bits (106), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 47/174 (27%), Positives = 78/174 (44%), Gaps = 18/174 (10%)

Query: 118 TGRYHTLLISNSS-VFSCGSSLCGVLGHG----PETTQCVS-FTRINFPSAAHVVQVSAS 171
           +G   TL ++ S  VFS G    G LG G     +T + V     IN      VV+V   
Sbjct: 260 SGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDIN------VVKVFCG 313

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
              +A +   G+V+T G   ++  GH  +   +  P+++E+L+    K ++ G      L
Sbjct: 314 GQFSAALTAHGEVYTWGKGDAYRLGH-GSEEHVRYPKVIESLRDKKIKDLSVGTTHILAL 372

Query: 232 TIRGHVHTCGSNTHGQLGH--GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           T    V+  G N +GQ+    G  +  PT   + P     +V+ +A+GP+   A
Sbjct: 373 TEDQFVYGWGRNDYGQIDPTLGPVVSEPT---LCPTLSSKTVIGLASGPTQSFA 423



 Score = 44.7 bits (104), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 53/110 (48%), Gaps = 5/110 (4%)

Query: 237  VHTCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
            V+  G N   QLG   G  +  P    +  L ++  +  IA G   +  V+  G +Y+ G
Sbjct: 2591 VYVWGLNDKDQLGGLKGSKIKLPIYSEV--LSKLKPI-HIAGGSKTLFIVSQEGKLYACG 2647

Query: 295  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             G+N  LG G+ ++  +P+AI    +  I  V V +G +H +AL   G V
Sbjct: 2648 EGTNGRLGLGDDNNVCEPKAIPFLSQFVIKKVAVHSGGKHALALTQDGKV 2697



 Score = 38.1 bits (87), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 5/62 (8%)

Query: 235  GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV--VQIAAGPSYMLAVTGNGVVYS 292
            G ++  G N  GQLG    L+ P  K  AP E + ++  +Q+A G   + AVT +G VYS
Sbjct: 3570 GAIYGWGHNHRGQLG---GLEGPKVKLPAPCESLSALRPIQLAGGEQTLFAVTADGKVYS 3626

Query: 293  FG 294
             G
Sbjct: 3627 TG 3628


>gi|222623048|gb|EEE57180.1| hypothetical protein OsJ_07117 [Oryza sativa Japonica Group]
          Length = 463

 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 73/234 (31%), Positives = 117/234 (50%), Gaps = 9/234 (3%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRI----NFPSAAHVVQVSA 170
           I+ G  H++ L+S   V S G    G LGHG    + V         + P     V +  
Sbjct: 25  ISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLTAAFDDAPGGVASVVICG 84

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
           +++  A+  +  Q+++ G       GH +++  +F P+ ++AL+GV   Q+  G +    
Sbjct: 85  ADHTTAYSDEELQLYSWGWGDFGRLGHGNSSD-VFNPQPIQALQGVRITQIACGDSHCLA 143

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           +T+ GHVH+ G N +GQLG G+T D   P+ I   E V  V  IAAG  +  AVT +G +
Sbjct: 144 VTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQAFEGV-RVKMIAAGAEHTAAVTEDGDL 202

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           Y +G G    LG G++ D L P  + +    G  +V V+ G  H + + SSG +
Sbjct: 203 YGWGWGRYGNLGLGDRDDRLIPEKVSSV--NGQKMVLVACGWRHTITVSSSGSI 254



 Score = 78.2 bits (191), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 60/182 (32%), Positives = 89/182 (48%), Gaps = 7/182 (3%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRP---IFRPRLVEALKGVPCKQ 220
           VV +SA  +H+  +L  G V + G       GH D  +RP   +      +A  GV    
Sbjct: 22  VVLISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLTAAFDDAPGGVASVV 81

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           +    + T +      +++ G    G+LGHG++ D   P+ I  L+ V  + QIA G S+
Sbjct: 82  ICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQPIQALQGV-RITQIACGDSH 140

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            LAVT  G V+S+G   N  LG G   D L P+ IQ F  +G+ V  ++AG EH  A+  
Sbjct: 141 CLAVTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQAF--EGVRVKMIAAGAEHTAAVTE 198

Query: 341 SG 342
            G
Sbjct: 199 DG 200



 Score = 64.7 bits (156), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 64/224 (28%), Positives = 96/224 (42%), Gaps = 21/224 (9%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G  HT  ++ +  ++  G    G LG G    + +   +++  +   +V V+    H
Sbjct: 186 IAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDDRLIP-EKVSSVNGQKMVLVACGWRH 244

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG------LNFT 228
              V  SG ++T G +     GH D    +  P  +EALK     Q  A       L   
Sbjct: 245 TITVSSSGSIYTYGWSKYGQLGHGDFEDHLV-PHKLEALKDTTISQEEAVELIFFFLGDE 303

Query: 229 GF---------LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGP 278
           GF         L   G ++  G N  GQ+G GD  D  +P  +  P E+   VVQ+A G 
Sbjct: 304 GFRVGGGIQWALAADGKLYGWGWNKFGQVGVGDNEDHCSPVQVNFPNEQ--KVVQVACGW 361

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
            + LA+T    V+S+G G++  LGHGE  D   P+ I      G
Sbjct: 362 RHTLALTEAKNVFSWGRGTSGQLGHGEIVDRNIPKMIDALSSDG 405



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 100/242 (41%), Gaps = 25/242 (10%)

Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI  G  H L ++ +  V S G +  G LG G  T   +   +I       V  ++A   
Sbjct: 133 QIACGDSHCLAVTVAGHVHSWGRNQNGQLGLG-NTEDSLLPQKIQAFEGVRVKMIAAGAE 191

Query: 174 HAAFVLQSGQVFTCGDN--SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           H A V + G ++  G     +   G RD +R I  P  V ++ G     V  G   T  +
Sbjct: 192 HTAAVTEDGDLYGWGWGRYGNLGLGDRD-DRLI--PEKVSSVNGQKMVLVACGWRHTITV 248

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA--------------- 276
           +  G ++T G + +GQLGHGD  D   P  +  L++  ++ Q  A               
Sbjct: 249 SSSGSIYTYGWSKYGQLGHGDFEDHLVPHKLEALKDT-TISQEEAVELIFFFLGDEGFRV 307

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
           G     A+  +G +Y +G      +G G+  D   P  +     +   VV+V+ G  H +
Sbjct: 308 GGGIQWALAADGKLYGWGWNKFGQVGVGDNEDHCSPVQVNFPNEQ--KVVQVACGWRHTL 365

Query: 337 AL 338
           AL
Sbjct: 366 AL 367



 Score = 47.0 bits (110), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 71/172 (41%), Gaps = 20/172 (11%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVV- 166
           +  G  HT+ +S+S S+++ G S  G LGHG       P   + +  T I+   A  ++ 
Sbjct: 238 VACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFEDHLVPHKLEALKDTTISQEEAVELIF 297

Query: 167 --------QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
                   +V      A  +   G+++  G N     G  D N     P  V        
Sbjct: 298 FFLGDEGFRVGGGIQWA--LAADGKLYGWGWNKFGQVGVGD-NEDHCSPVQVNFPNEQKV 354

Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 270
            QV  G   T  LT   +V + G  T GQLGHG+ +DR  PK I  L   GS
Sbjct: 355 VQVACGWRHTLALTEAKNVFSWGRGTSGQLGHGEIVDRNIPKMIDALSSDGS 406


>gi|432095949|gb|ELK26864.1| Putative E3 ubiquitin-protein ligase HERC3 [Myotis davidii]
          Length = 1031

 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 112/227 (49%), Gaps = 7/227 (3%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGHG E  +     +I   +  H+V V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGLNTKGQLGHGREGNKP---EQIGALADQHIVHVACGESHSLAL 99

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 239 TCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G D   + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKDFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V
Sbjct: 219 AGQLGLSDEEDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGV 263



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 75/234 (32%), Positives = 113/234 (48%), Gaps = 7/234 (2%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  VHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKDFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYV 344
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLI 316



 Score = 74.3 bits (181), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 52/165 (31%), Positives = 84/165 (50%), Gaps = 25/165 (15%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           T GQLGHG   ++P        E++G+     +V +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHGREGNKP--------EQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 299 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADG 156



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/195 (32%), Positives = 96/195 (49%), Gaps = 8/195 (4%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++ G +H L L ++   F+ G +  G LG G +     S  R+       + QV+A  
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKDFPSQASPQRVRSLEGIPLAQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
            H+  +  SG VF  G N++   G  D  +R    P  V+ L+      ++ G   T  L
Sbjct: 200 AHSFALSLSGAVFGWGMNNAGQLGLSDEEDRE--SPCHVKLLRTQKVVYISCGEEHTAVL 257

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGNGV 289
           T  G V T G+ + GQLGH    D   P+ +  LE +GS V QIA G  + LA V  +G+
Sbjct: 258 TKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGL 315

Query: 290 VYSFGSGSNFCLGHG 304
           +Y+FG G+   LG G
Sbjct: 316 IYAFGCGARGQLGTG 330


>gi|428170910|gb|EKX39831.1| hypothetical protein GUITHDRAFT_164838 [Guillardia theta CCMP2712]
          Length = 1983

 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 80/259 (30%), Positives = 124/259 (47%), Gaps = 14/259 (5%)

Query: 95  RFLQSVEHSSDIVETSAGN--MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQC 151
           R  +SV+H   I ET A    + I  G+  T  ++++  V++ G S  G LG G      
Sbjct: 536 RSEESVKHPKRI-ETLAKMSVVFIACGKDSTAALTDTGKVYTWGKSAQGKLGLGSGKPLA 594

Query: 152 VSFTRINFPSAAHVV-QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV 210
           +   ++    ++HVV Q+S   NHAA      + F  G N+    G    +  +  P  +
Sbjct: 595 IVVPQLVQDLSSHVVCQISLGRNHAACSTDMHKFFVWGSNTFGQLGIPHISSYMPDPYEI 654

Query: 211 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD-----TLDRPTPKSIAPL 265
            +L+    + +  G   T   T  G V +CG   HGQLGHGD      L +  P     +
Sbjct: 655 TSLREANIRSIACGGWHTLISTNTGSVMSCGKGWHGQLGHGDYESLTALSKTLPYFKKIV 714

Query: 266 EEVGS--VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 323
           E  G   +V+++AG     A+T  G ++++G G  + LGH    +E  PR ++ F +  I
Sbjct: 715 EGFGDSFIVKVSAGKESSAAITNKGRLFTWGKGDEYQLGHESSKNEAYPREVEFFAK--I 772

Query: 324 HVVRVSAGDEHVVALDSSG 342
            VV VS GD H++ALD SG
Sbjct: 773 RVVDVSIGDSHMLALDYSG 791



 Score = 77.8 bits (190), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 56/199 (28%), Positives = 96/199 (48%), Gaps = 4/199 (2%)

Query: 98  QSVEHSSDIVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR 156
           +S++    I+++    + I  G YH+L ++++  +FS GS   G LG G +     S   
Sbjct: 175 KSLDKLQAIIQSLNNIVGIAAGYYHSLALNDTGKIFSWGSGSWGKLGIGSDAN-AESPRF 233

Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
           +     + VV ++   +H A +   G V+T G       GH+      F PRL  +L+  
Sbjct: 234 VASLQNSKVVHIACGAHHTAAITTVGDVWTWGKGLRGQLGHKSVKEE-FSPRLNASLRKC 292

Query: 217 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
             +++  G + T  +   G +++ G+NTHGQLG GD  DR  P  +        V+ I A
Sbjct: 293 GAQKIRCGDDHTLVILRSGQLYSMGANTHGQLGLGDATDRIIPTLVTGFANE-KVIDIDA 351

Query: 277 GPSYMLAVTGNGVVYSFGS 295
                +A+T  G V++FG+
Sbjct: 352 KGCRSIALTNTGKVFAFGN 370



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/240 (27%), Positives = 110/240 (45%), Gaps = 19/240 (7%)

Query: 119 GRYHTLLIS-NSSVFSCGSSLCGVLGHG------------PETTQCVSFTRINFPSAAHV 165
           G+ HTL +S +  V SCGS++ G LG G            P   + +   +    S  ++
Sbjct: 131 GKQHTLFLSADGVVLSCGSNVYGQLGMGDHMLSRSTPVSEPSKQKSLDKLQAIIQSLNNI 190

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCG-HRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V ++A   H+  +  +G++F+ G  S    G   D N     PR V +L+      +  G
Sbjct: 191 VGIAAGYYHSLALNDTGKIFSWGSGSWGKLGIGSDANAE--SPRFVASLQNSKVVHIACG 248

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
            + T  +T  G V T G    GQLGH    +  +P+  A L + G+  +I  G  + L +
Sbjct: 249 AHHTAAITTVGDVWTWGKGLRGQLGHKSVKEEFSPRLNASLRKCGA-QKIRCGDDHTLVI 307

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             +G +YS G+ ++  LG G+  D + P  +  F  +   V+ + A     +AL ++G V
Sbjct: 308 LRSGQLYSMGANTHGQLGLGDATDRIIPTLVTGFANE--KVIDIDAKGCRSIALTNTGKV 365



 Score = 75.5 bits (184), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 60/178 (33%), Positives = 87/178 (48%), Gaps = 15/178 (8%)

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
           LQ   VF  GD  +   G++ +      P +V A + V  K    G   T FL+  G V 
Sbjct: 87  LQGSHVFMWGDGENGKLGNQ-SEEIQHVPYIVPAFRNVLVKVCALGKQHTLFLSADGVVL 145

Query: 239 TCGSNTHGQLGHGD-TLDRPTP-------KSIAPLEEV----GSVVQIAAGPSYMLAVTG 286
           +CGSN +GQLG GD  L R TP       KS+  L+ +     ++V IAAG  + LA+  
Sbjct: 146 SCGSNVYGQLGMGDHMLSRSTPVSEPSKQKSLDKLQAIIQSLNNIVGIAAGYYHSLALND 205

Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            G ++S+GSGS   LG G   +   PR + + +     VV ++ G  H  A+ + G V
Sbjct: 206 TGKIFSWGSGSWGKLGIGSDANAESPRFVASLQNS--KVVHIACGAHHTAAITTVGDV 261



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 105/229 (45%), Gaps = 11/229 (4%)

Query: 115  QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRIN--FPSAAHVVQVSAS 171
            +I  G +H+  I  S  +   G ++ G LGHG +T  C S  R+N        V      
Sbjct: 1327 KILCGGWHSAAILESGKILLWGKNVYGQLGHG-DTKSC-SAPRVNQYLRLEGKVRTAGLG 1384

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGF 230
             NH   V+ + +VF  G N     G  D +R     P  +E L G    QV AG   +  
Sbjct: 1385 ANHTLVVMVANKVFAMGSNIDGQLGLDDPSRTGKNVPVSIEELNGKNICQVAAGDQHSLA 1444

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNGV 289
            L++ G V + G +  GQLGH    D+  P  +    ++   V+ IA G ++  A++  G 
Sbjct: 1445 LSVFGEVWSWGGSPFGQLGHETITDKLAPTPLLERHKIPPDVKSIACGYTFSAAMSAKGE 1504

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            V+++G+G +  LGH  +     P  I+ F      VV+++ G +H+  +
Sbjct: 1505 VFTWGNGESGELGHAPKVLTYAPSLIKDFS----EVVQIACGFKHMAGI 1549



 Score = 72.4 bits (176), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 63/222 (28%), Positives = 97/222 (43%), Gaps = 24/222 (10%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLG------HGPETTQCVSFTRINFPSAAHVVQ 167
           QI+ GR H    ++    F  GS+  G LG      + P+  +  S    N  S      
Sbjct: 611 QISLGRNHAACSTDMHKFFVWGSNTFGQLGIPHISSYMPDPYEITSLREANIRS------ 664

Query: 168 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR--------PIFRPRLVEALKGVPCK 219
           ++    H      +G V +CG       GH D           P F+ ++VE        
Sbjct: 665 IACGGWHTLISTNTGSVMSCGKGWHGQLGHGDYESLTALSKTLPYFK-KIVEGFGDSFIV 723

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
           +V+AG   +  +T +G + T G     QLGH  + +   P+ +    ++  VV ++ G S
Sbjct: 724 KVSAGKESSAAITNKGRLFTWGKGDEYQLGHESSKNEAYPREVEFFAKI-RVVDVSIGDS 782

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRR 320
           +MLA+  +G+ YS+G+GS   LGHGE    E  PR I   RR
Sbjct: 783 HMLALDYSGLPYSWGNGSAGQLGHGEMCERETLPRPIMLCRR 824



 Score = 70.9 bits (172), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 69/250 (27%), Positives = 107/250 (42%), Gaps = 20/250 (8%)

Query: 108 ETSAGNMQITTGRY--HTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV 165
           E S G       RY    + +  S VF  G    G LG+  E  Q V +    F +   +
Sbjct: 67  EESEGYDYHMEKRYIRENIELQGSHVFMWGDGENGKLGNQSEEIQHVPYIVPAFRNV--L 124

Query: 166 VQVSA-SENHAAFVLQSGQVFTCGDNSSFCCGHRD----TNRPIFRPRLVEALKGVPC-- 218
           V+V A  + H  F+   G V +CG N     G  D     + P+  P   ++L  +    
Sbjct: 125 VKVCALGKQHTLFLSADGVVLSCGSNVYGQLGMGDHMLSRSTPVSEPSKQKSLDKLQAII 184

Query: 219 ------KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
                   + AG   +  L   G + + GS + G+LG G   +  +P+ +A L+    VV
Sbjct: 185 QSLNNIVGIAAGYYHSLALNDTGKIFSWGSGSWGKLGIGSDANAESPRFVASLQN-SKVV 243

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
            IA G  +  A+T  G V+++G G    LGH    +E  PR   + R+ G   +R   GD
Sbjct: 244 HIACGAHHTAAITTVGDVWTWGKGLRGQLGHKSVKEEFSPRLNASLRKCGAQKIR--CGD 301

Query: 333 EHVVALDSSG 342
           +H + +  SG
Sbjct: 302 DHTLVILRSG 311



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 56/192 (29%), Positives = 91/192 (47%), Gaps = 6/192 (3%)

Query: 114  MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            M++  G YH L L     V++ G    G  G    T   +    ++  +A  ++ V A  
Sbjct: 1698 MKVACGTYHCLALTEEKRVYAWGDGKWGNAGVS-NTNDVLEPQELSSLAACSIIGVHAGG 1756

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL- 231
             H+A + Q G +F  G NS+   G   T+     P  +  L GV    V+ G N +  L 
Sbjct: 1757 FHSAALSQYGDLFMWGKNSNGQLGLGTTSAAEDSPTKISNLDGV-VMDVSLGANHSAVLM 1815

Query: 232  -TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
                 ++ TCG N +GQLG GD +DR T  ++  L++   +V  + G ++  AV+  G +
Sbjct: 1816 QVTSPNLFTCGLNANGQLGLGDFVDRSTLTAVDALDDR-QIVSASCGAAHTAAVSQYGDL 1874

Query: 291  YSFGSGSNFCLG 302
             ++G+G N  LG
Sbjct: 1875 ITWGNGRNGQLG 1886



 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 73/243 (30%), Positives = 110/243 (45%), Gaps = 23/243 (9%)

Query: 114  MQITTGRYHTL-LISNSSVFSCGSSLCGVLGH----GPETTQCVSFTRINFPSAAHVVQV 168
            + I  GR+H + L S   V S G+   G LG        T Q V       P      ++
Sbjct: 1274 LSIACGRWHNMTLTSERQVLSWGAGEFGQLGLDHNLSKGTPQMVKALDGRAP-----CKI 1328

Query: 169  SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL--N 226
                 H+A +L+SG++   G N     GH DT +    PR+ + L+ +  K  TAGL  N
Sbjct: 1329 LCGGWHSAAILESGKILLWGKNVYGQLGHGDT-KSCSAPRVNQYLR-LEGKVRTAGLGAN 1386

Query: 227  FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP--TPKSI-APLEEVG--SVVQIAAGPSYM 281
             T  + +   V   GSN  GQLG    LD P  T K++   +EE+   ++ Q+AAG  + 
Sbjct: 1387 HTLVVMVANKVFAMGSNIDGQLG----LDDPSRTGKNVPVSIEELNGKNICQVAAGDQHS 1442

Query: 282  LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
            LA++  G V+S+G      LGH    D+L P  +    +    V  ++ G     A+ + 
Sbjct: 1443 LALSVFGEVWSWGGSPFGQLGHETITDKLAPTPLLERHKIPPDVKSIACGYTFSAAMSAK 1502

Query: 342  GYV 344
            G V
Sbjct: 1503 GEV 1505



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 76/161 (47%), Gaps = 4/161 (2%)

Query: 182  GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 241
            G VF  G+++    G R   +    P L+++L       ++A  + + F+T  G ++  G
Sbjct: 1610 GCVFVWGEDTCGQLGIRGL-QAARSPSLMQSLLATSIVHISANSDMSAFVTDSGSLYVSG 1668

Query: 242  SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 301
             + HG+LG G     PTP  I  L  V  ++++A G  + LA+T    VY++G G     
Sbjct: 1669 GSEHGRLGLGHMAPAPTPVEIRSLNTV-KIMKVACGTYHCLALTEEKRVYAWGDGKWGNA 1727

Query: 302  GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            G    +D L+P+ + +       ++ V AG  H  AL   G
Sbjct: 1728 GVSNTNDVLEPQELSSL--AACSIIGVHAGGFHSAALSQYG 1766



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/239 (26%), Positives = 99/239 (41%), Gaps = 11/239 (4%)

Query: 114  MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA------HVV 166
            +++  G  H+L  S +  V++ G+   G LG   E   CV       P          ++
Sbjct: 1216 VEVACGCEHSLARSFDGGVYAWGAGDRGQLG-SLENFDCVKINYAFNPQPVLNLKRYFIL 1274

Query: 167  QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG-VPCKQVTAGL 225
             ++    H   +    QV + G       G  D N     P++V+AL G  PCK +  G 
Sbjct: 1275 SIACGRWHNMTLTSERQVLSWGAGEFGQLG-LDHNLSKGTPQMVKALDGRAPCKILCGGW 1333

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            +    L   G +   G N +GQLGHGDT     P+    L   G V     G ++ L V 
Sbjct: 1334 HSAAILE-SGKILLWGKNVYGQLGHGDTKSCSAPRVNQYLRLEGKVRTAGLGANHTLVVM 1392

Query: 286  GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
                V++ GS  +  LG  +     +   +      G ++ +V+AGD+H +AL   G V
Sbjct: 1393 VANKVFAMGSNIDGQLGLDDPSRTGKNVPVSIEELNGKNICQVAAGDQHSLALSVFGEV 1451



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 8/111 (7%)

Query: 236  HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
            H++T G   +G+LGHG      TP+ I        +V++A G  + LA + +G VY++G+
Sbjct: 1180 HIYTWGCGVNGRLGHGFHTGYSTPQEITSFPSNTKIVEVACGCEHSLARSFDGGVYAWGA 1239

Query: 296  GSNFCLGHGEQHD------ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            G    LG  E  D         P+ +   +R    ++ ++ G  H + L S
Sbjct: 1240 GDRGQLGSLENFDCVKINYAFNPQPVLNLKR--YFILSIACGRWHNMTLTS 1288



 Score = 41.6 bits (96), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 36/108 (33%), Positives = 52/108 (48%), Gaps = 12/108 (11%)

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPT-----PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
           G+++T G    G+LGHG    R       PK I  L ++ SVV IA G     A+T  G 
Sbjct: 515 GYIYTYGKGVFGRLGHGVEYTRSEESVKHPKRIETLAKM-SVVFIACGKDSTAALTDTGK 573

Query: 290 VYSFGSGS--NFCLGHGEQHDELQPRAIQTFRRKGIHVV-RVSAGDEH 334
           VY++G  +     LG G+    + P+ +Q       HVV ++S G  H
Sbjct: 574 VYTWGKSAQGKLGLGSGKPLAIVVPQLVQDLSS---HVVCQISLGRNH 618


>gi|157111251|ref|XP_001651453.1| hect E3 ubiquitin ligase [Aedes aegypti]
 gi|108878447|gb|EAT42672.1| AAEL005820-PA [Aedes aegypti]
          Length = 1057

 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 66/224 (29%), Positives = 112/224 (50%), Gaps = 4/224 (1%)

Query: 116 ITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           ++ G  H+L ++N   VFS GS+  G LGH  +     +   I   +   VVQ+++ + H
Sbjct: 94  VSCGTTHSLALTNWGQVFSWGSNSIGQLGHDTDLQTYTTPRMIKTIATKTVVQIASGQFH 153

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           +  +  SG++F+ G N     G   T   +  P LV++L G+P   +  G N +  ++  
Sbjct: 154 SLALTNSGELFSWGANGYGQLGLGTTGEKVVTPTLVKSLAGIPIAFIACGGNHSFAVSKS 213

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G +   G NT GQLG  D + R  P+ +  L  +G V  I+ G  +   +T  G V++ G
Sbjct: 214 GAIFGWGKNTFGQLGLNDLVSRCFPQQLKTLRNLG-VRYISCGDDFSAFLTQEGGVFTCG 272

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           +G+   LGHG   +E+ PR +  F   G  + +++ G  H +A 
Sbjct: 273 AGTFGQLGHGTCSNEILPRMV--FELMGSKITQIACGRRHTLAF 314



 Score = 84.3 bits (207), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 71/243 (29%), Positives = 115/243 (47%), Gaps = 11/243 (4%)

Query: 110 SAGNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH---V 165
           S+   Q   G  HTLL++ +  +FSCG++  G LGH    T C+   R  F S+     V
Sbjct: 35  SSSVQQAACGTSHTLLLTKDGKLFSCGNNDHGQLGHD---TDCLPNKRPQFISSLENYIV 91

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
             VS    H+  +   GQVF+ G NS    GH    +    PR+++ +      Q+ +G 
Sbjct: 92  THVSCGTTHSLALTNWGQVFSWGSNSIGQLGHDTDLQTYTTPRMIKTIATKTVVQIASGQ 151

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             +  LT  G + + G+N +GQLG G T ++  TP  +  L  +  +  IA G ++  AV
Sbjct: 152 FHSLALTNSGELFSWGANGYGQLGLGTTGEKVVTPTLVKSLAGI-PIAFIACGGNHSFAV 210

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           + +G ++ +G  +   LG  +      P+ ++T R  G+    +S GD+    L   G V
Sbjct: 211 SKSGAIFGWGKNTFGQLGLNDLVSRCFPQQLKTLRNLGVRY--ISCGDDFSAFLTQEGGV 268

Query: 345 SLC 347
             C
Sbjct: 269 FTC 271



 Score = 84.3 bits (207), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 61/217 (28%), Positives = 109/217 (50%), Gaps = 4/217 (1%)

Query: 130 SVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
           +V+  G+++ G LG G  E  Q +    +++  ++ V Q +   +H   + + G++F+CG
Sbjct: 2   AVYCWGNTVHGELGLGGIEDEQVLLPREMDWCHSSSVQQAACGTSHTLLLTKDGKLFSCG 61

Query: 189 DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 248
           +N     GH     P  RP+ + +L+      V+ G   +  LT  G V + GSN+ GQL
Sbjct: 62  NNDHGQLGHDTDCLPNKRPQFISSLENYIVTHVSCGTTHSLALTNWGQVFSWGSNSIGQL 121

Query: 249 GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD 308
           GH   L   T   +       +VVQIA+G  + LA+T +G ++S+G+     LG G   +
Sbjct: 122 GHDTDLQTYTTPRMIKTIATKTVVQIASGQFHSLALTNSGELFSWGANGYGQLGLGTTGE 181

Query: 309 E-LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           + + P  +++    GI +  ++ G  H  A+  SG +
Sbjct: 182 KVVTPTLVKSL--AGIPIAFIACGGNHSFAVSKSGAI 216



 Score = 43.5 bits (101), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 58/131 (44%), Gaps = 16/131 (12%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ------V 168
           I  G  H+  +S S ++F  G +  G LG     ++C       FP     ++      +
Sbjct: 200 IACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLVSRC-------FPQQLKTLRNLGVRYI 252

Query: 169 SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
           S  ++ +AF+ Q G VFTCG  +    GH   +  I  PR+V  L G    Q+  G   T
Sbjct: 253 SCGDDFSAFLTQEGGVFTCGAGTFGQLGHGTCSNEIL-PRMVFELMGSKITQIACGRRHT 311

Query: 229 -GFLTIRGHVH 238
             F+  RG ++
Sbjct: 312 LAFVPSRGKIY 322


>gi|390353202|ref|XP_789385.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Strongylocentrotus purpuratus]
          Length = 1070

 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/231 (30%), Positives = 116/231 (50%), Gaps = 11/231 (4%)

Query: 115 QITTGRYHTLLISN-SSVFSCGSS---LCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
           Q++ G  HTL +++   V   G +    CG+     E  +   F  +   S+  V QV+ 
Sbjct: 92  QVSCGNDHTLAVTDRGQVLGWGRNDRGQCGLSTGDSEDKRKPRF--LKSLSSCQVAQVAC 149

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR--PRLVEALKGVPCKQVTAGLNFT 228
              H+  + + G++F  GDNS    G     R ++R  P+ + +L GVP +++  G   +
Sbjct: 150 GSMHSMALTRDGRIFAWGDNSFGQLGIGAPGRTLYRDHPQQLSSLPGVPIRRLACGGWHS 209

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
             L++ G V   G N  GQLG G T DR +P  +  L+    V  IA G +Y   +T +G
Sbjct: 210 FALSVSGAVFGWGKNNCGQLGLGTTEDRVSPTPLKNLK-TKQVKYIACGQNYTAILTASG 268

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
            ++ FG GS   LGHG   +E+ PR++Q F   G  + +V+ G +H + L+
Sbjct: 269 GLFLFGQGSEGQLGHGSHSNEVNPRSVQGFL--GSEITQVACGRQHTLVLE 317



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 64/223 (28%), Positives = 99/223 (44%), Gaps = 14/223 (6%)

Query: 130 SVFSCGSSLCGVLG---HGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 186
           SVFS G +  G LG    G +     S   +   +   + ++S    H   +L+ G V  
Sbjct: 2   SVFSWGCTQDGQLGISGLGDDVPSLSSPREVPALAGKQIREISCGLRHTCVLLRDGTVMM 61

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
           CG N     G    +RP      V A + +   QV+ G + T  +T RG V   G N  G
Sbjct: 62  CGANDR---GQLGQDRPGSELAHVPATETLVITQVSCGNDHTLAVTDRGQVLGWGRNDRG 118

Query: 247 QLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG 304
           Q G   GD+ D+  P+ +  L     V Q+A G  + +A+T +G ++++G  S   LG G
Sbjct: 119 QCGLSTGDSEDKRKPRFLKSLSSC-QVAQVACGSMHSMALTRDGRIFAWGDNSFGQLGIG 177

Query: 305 EQHDEL---QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
                L    P+ + +    G+ + R++ G  H  AL  SG V
Sbjct: 178 APGRTLYRDHPQQLSSL--PGVPIRRLACGGWHSFALSVSGAV 218



 Score = 46.2 bits (108), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 61/240 (25%), Positives = 104/240 (43%), Gaps = 40/240 (16%)

Query: 115 QITTGRYHTLLISNSS--VFSCGSSLCGVLGHGPETTQ-CVSFTRINFPSAAHVVQVSAS 171
           Q+  GR HTL++   +   FS G    G LG   ++++ C S     + + +     S  
Sbjct: 305 QVACGRQHTLVLEGRTGRFFSLGQGSKGQLGLDNDSSKSCASPVPGPWEAPSSTEGCSNG 364

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHR--DTNRPI-FRPRLVEALKGVPCKQVTAGLNFT 228
           E   + +   G +F  GD S FC   R  D + P+ FR    EA+  +    +T  L   
Sbjct: 365 EESRSII---GSIFAGGDQS-FCIVSRGNDPDHPLDFR----EAIPSIEPVVLTKDL--- 413

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
                             ++     L  P+ K++  LE   ++   A   +  L   G+G
Sbjct: 414 ----------------LQEVSESSPLLEPS-KAVQTLEM--ALSSPACLNASFLVGAGSG 454

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD--SSGYVSL 346
            ++ FG GS   LGHG   +E+ PR+++ F   G  + +V+ G +H + L+  + G+ SL
Sbjct: 455 GLFLFGQGSEGQLGHGSHSNEVNPRSVKDFL--GNEITQVACGRQHTLVLEGRTGGFYSL 512


>gi|380018521|ref|XP_003693176.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Apis
           florea]
          Length = 1081

 Score = 96.3 bits (238), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 68/217 (31%), Positives = 108/217 (49%), Gaps = 9/217 (4%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 189
           +F  GS++ G LG G    + +   R ++F  AA + Q++  EN+   + Q G++++CG+
Sbjct: 28  MFCWGSTIHGELGLGGIEDENILIPRELDFKKAAEIQQIACGENYTVVITQIGEIYSCGN 87

Query: 190 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
           N     GH    +   R +L+  L     K+   G   T  +   G + + GSNT GQLG
Sbjct: 88  NDYGQLGHEKGRK---RLQLIPGLDAFVFKKAACGAYHTLAINEWGQLFSWGSNTEGQLG 144

Query: 250 -HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-H 307
            +       +P+ +  L     VVQIA G  +  A+T NG +YS+GS S   LG G    
Sbjct: 145 LNSKNFMESSPRMVKTL-GTSVVVQIACGMKHAFALTNNGELYSWGSNSEGQLGLGTDIK 203

Query: 308 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            E++P+ I  F   GI +  ++ G  H +A+  SG V
Sbjct: 204 YEIKPKFISAF--IGIPIAFIACGGYHSIAISKSGAV 238



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 66/221 (29%), Positives = 104/221 (47%), Gaps = 4/221 (1%)

Query: 119 GRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 177
           G YHTL I+    +FS GS+  G LG   +     S   +     + VVQ++    HA  
Sbjct: 119 GAYHTLAINEWGQLFSWGSNTEGQLGLNSKNFMESSPRMVKTLGTSVVVQIACGMKHAFA 178

Query: 178 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
           +  +G++++ G NS    G     +   +P+ + A  G+P   +  G   +  ++  G V
Sbjct: 179 LTNNGELYSWGSNSEGQLGLGTDIKYEIKPKFISAFIGIPIAFIACGGYHSIAISKSGAV 238

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
              G NT GQLG  DT DR  P  +  L+    +   A G  + + +T +G V++ G+G 
Sbjct: 239 FGWGKNTFGQLGLNDTQDRNLPCQLQTLQN-AKICYAACGEEFSVFLTVDGGVFTCGAGM 297

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
              LGHG   +E+ PR  Q     G  V ++S G  H +AL
Sbjct: 298 YGQLGHGSNSNEILPR--QVMELMGSTVTQISCGKRHTLAL 336



 Score = 53.5 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 44/149 (29%), Positives = 64/149 (42%), Gaps = 4/149 (2%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G YH++ IS S +VF  G +  G LG      + +   ++     A +   +  E  
Sbjct: 222 IACGGYHSIAISKSGAVFGWGKNTFGQLGLNDTQDRNLP-CQLQTLQNAKICYAACGEEF 280

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFLTI 233
           + F+   G VFTCG       GH   +  I  PR V  L G    Q++ G   T   +  
Sbjct: 281 SVFLTVDGGVFTCGAGMYGQLGHGSNSNEIL-PRQVMELMGSTVTQISCGKRHTLALVPS 339

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           RG V+  G    GQLG+  T    TP+ +
Sbjct: 340 RGRVYAWGLGGAGQLGNHSTRSVTTPQVV 368


>gi|355694501|gb|AER99690.1| hect domain and RLD 5 [Mustela putorius furo]
          Length = 675

 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 74/223 (33%), Positives = 110/223 (49%), Gaps = 9/223 (4%)

Query: 99  SVEHSS-DIVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR 156
           S+EH+    +      +QIT G YH+L +S    +F+ G +L G LG G       +   
Sbjct: 34  SIEHARFQCILQEKSIIQITCGDYHSLALSKGGELFAWGQNLHGQLGIGRLFASIPTPQL 93

Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALK 214
           +   S   +VQ+SA + H+  +  SG +++ G N       GH D       P LVEAL 
Sbjct: 94  VEHLSGVPLVQISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTDGEE---FPSLVEALD 150

Query: 215 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 274
               + +  G + T  LT  G V T G+  HGQLGH  T +   P+ +  L  +  V Q+
Sbjct: 151 SQKVEFLACGGSHTALLTEDGQVFTFGAGKHGQLGHNSTQNELRPRLVTELTGI-RVTQV 209

Query: 275 AAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
           A G  + LA V+  G V+SFGSG    LG+G  H++L P  ++
Sbjct: 210 ACGRRHTLAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMK 252



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 55/173 (31%), Positives = 91/173 (52%), Gaps = 3/173 (1%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           ++Q++  + H+  + + G++F  G N     G       I  P+LVE L GVP  Q++AG
Sbjct: 49  IIQITCGDYHSLALSKGGELFAWGQNLHGQLGIGRLFASIPTPQLVEHLSGVPLVQISAG 108

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
              +  L++ G++++ G N  GQLG G T     P  +  L+    V  +A G S+   +
Sbjct: 109 KAHSMALSMSGNIYSWGRNDLGQLGLGHTDGEEFPSLVEALDS-QKVEFLACGGSHTALL 167

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           T +G V++FG+G +  LGH    +EL+PR +      GI V +V+ G  H +A
Sbjct: 168 TEDGQVFTFGAGKHGQLGHNSTQNELRPRLVTEL--TGIRVTQVACGRRHTLA 218


>gi|443690304|gb|ELT92472.1| hypothetical protein CAPTEDRAFT_172844 [Capitella teleta]
          Length = 4817

 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 82/259 (31%), Positives = 120/259 (46%), Gaps = 13/259 (5%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNMQI------TTGRYHTLLISNSSVFSCGSSLCGVLGHG 145
           RV +   S E  S    ++  +++I      + G +   L S   V+S G+   G LGHG
Sbjct: 454 RVYKMTNSAEPQSMHEISTLADIEIIKLAAHSEGSHCLALTSEGDVYSWGNGDFGKLGHG 513

Query: 146 PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF 205
            +T  C S   IN      VV V+   +H+A +  SG++FT G  S    G   T   I 
Sbjct: 514 -DTVTCDSPMLINELHGKSVVNVACGSHHSAAITASGELFTWGRGSFGRLGLGSTED-IL 571

Query: 206 RPRLVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
            P LV  L GV    V   +G   T  L   G V++ G   +G+LG G +     PK + 
Sbjct: 572 TPALVSGLLGVTVVDVACGSGDAQTIALADTGSVYSWGDGEYGKLGRGGSEGCKAPKLVD 631

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 323
            L+ +  V ++  GP Y  AV  NG V+++G+G  + LGHG +     PR ++T    G 
Sbjct: 632 KLQGL-DVTRVYCGPQYSAAVCKNGAVFTWGNGEGYKLGHGTEEHVRFPRQVETL--AGK 688

Query: 324 HVVRVSAGDEHVVALDSSG 342
           HV  +S G  H +A    G
Sbjct: 689 HVTSLSLGSHHCLATTEEG 707



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 74/228 (32%), Positives = 108/228 (47%), Gaps = 7/228 (3%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+   L  +  VFS G    G LGH      C     I    +  V  ++   +H+A +
Sbjct: 3011 GRHAMALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALRSKRVRDIACGGSHSAAI 3069

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
            + +G ++T G       GH D N    RP+LV+AL+G    QV  G     T  LT  G 
Sbjct: 3070 ISNGDLYTWGLGEYGRLGHGD-NTTQLRPKLVKALEGQRVIQVALGSRDAQTLALTDSGT 3128

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V++ G    G+LG G +     P  I  L  VG V QI  G  + LA+T +G V+++G G
Sbjct: 3129 VYSWGDGDFGKLGRGGSEGCSVPHPIERLNGVG-VCQIECGAQFSLALTKSGQVWTWGKG 3187

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              F LGHG      +P+ ++T   KG  V  V+ G  H +++  +G V
Sbjct: 3188 DYFRLGHGTDAHVRKPQLVETL--KGKKVTHVAVGALHCLSVLDNGQV 3233



 Score = 88.6 bits (218), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 70/235 (29%), Positives = 110/235 (46%), Gaps = 8/235 (3%)

Query: 113  NMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS 171
             + I +G  H L +S    V+S G    G LGHG   + C     I       VV ++A 
Sbjct: 4025 KVAINSGGKHCLALSAEGEVYSWGEGEDGKLGHG-NRSPCDRPRAIESLRGKEVVDIAAG 4083

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
              H+A +  +G++++ G       GH D+     +P+LV+ALKG     V  G      L
Sbjct: 4084 GAHSACITSTGELYSWGKGRYGRLGHGDSEDQT-KPKLVDALKGYRVTDVACGSGDAQTL 4142

Query: 232  TIRGH--VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             I     V + G   +G+LG G +     P  I  L+ +G V+++  G  + +A+T +G 
Sbjct: 4143 CITDDDSVWSWGDGDYGKLGRGGSDGCKVPMKIDALQGLG-VIKVECGSQFSVALTKSGA 4201

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            VY++G G    LGHG +    +PR   T   +G  +V ++ G  H VA   +G V
Sbjct: 4202 VYTWGKGDYHRLGHGTEDHIRRPRRCTTL--QGKKIVSIACGSLHCVACTDAGEV 4254



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 101/228 (44%), Gaps = 10/228 (4%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA-- 176
            G +   +ISN  +++ G    G LGHG  TTQ +    +       V+QV+     A   
Sbjct: 3063 GSHSAAIISNGDLYTWGLGEYGRLGHGDNTTQ-LRPKLVKALEGQRVIQVALGSRDAQTL 3121

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             +  SG V++ GD      G R  +     P  +E L GV   Q+  G  F+  LT  G 
Sbjct: 3122 ALTDSGTVYSWGDGDFGKLG-RGGSEGCSVPHPIERLNGVGVCQIECGAQFSLALTKSGQ 3180

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V T G   + +LGHG       P+ +  L+    V  +A G  + L+V  NG VY++G  
Sbjct: 3181 VWTWGKGDYFRLGHGTDAHVRKPQLVETLKG-KKVTHVAVGALHCLSVLDNGQVYAWGDN 3239

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA---LDSS 341
             +   G+       +P  +Q    +G  + RV+ G  H +A   LDSS
Sbjct: 3240 DHGQQGNSTTTVNRKPALVQGL--EGCKISRVACGSSHSIAWCTLDSS 3285



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/190 (30%), Positives = 89/190 (46%), Gaps = 11/190 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            S    VQ+         V Q G++F CG+  N     G    N P  +PR + +L     
Sbjct: 2945 STLKCVQIVGGSKSLFCVTQDGKLFACGEATNGRLGLGISAGNVP--QPRQLTSLSQYVI 3002

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L     V  IA 
Sbjct: 3003 KKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALRS-KRVRDIAC 3061

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+  NG +Y++G G    LGHG+   +L+P+ ++    +G  V++V+ G  D  
Sbjct: 3062 GGSHSAAIISNGDLYTWGLGEYGRLGHGDNTTQLRPKLVKAL--EGQRVIQVALGSRDAQ 3119

Query: 335  VVALDSSGYV 344
             +AL  SG V
Sbjct: 3120 TLALTDSGTV 3129



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 80/162 (49%), Gaps = 5/162 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            QVF  G N     G    ++ I  P + E L  + C Q+  G      +T  G +  CG 
Sbjct: 2915 QVFVWGLNDKDQLGGPKGSK-IKTPGINETLSTLKCVQIVGGSKSLFCVTQDGKLFACGE 2973

Query: 243  NTHGQLGHGDTL-DRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G +  + P P+ +  L + V   V + +G  + +A+T +G V+S+G G +  
Sbjct: 2974 ATNGRLGLGISAGNVPQPRQLTSLSQYVIKKVAVHSGGRHAMALTVDGKVFSWGEGDDGK 3033

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            LGH  + +  +PR I+  R K   V  ++ G  H  A+ S+G
Sbjct: 3034 LGHFSRMNCDKPRLIEALRSK--RVRDIACGGSHSAAIISNG 3073



 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 93/194 (47%), Gaps = 17/194 (8%)

Query: 155 TRINFPSA-AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHR-DTNRPIFRPRLVEA 212
           T I  P+    ++QV+ S N    +L++G+V+   +++     H   T   I   +L   
Sbjct: 425 TTIPLPNDLDDIIQVACSSNSLLILLRTGRVYKMTNSAEPQSMHEISTLADIEIIKLAAH 484

Query: 213 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
            +G  C  +T+           G V++ G+   G+LGHGDT+   +P  I  L    SVV
Sbjct: 485 SEGSHCLALTS----------EGDVYSWGNGDFGKLGHGDTVTCDSPMLINELHG-KSVV 533

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--A 330
            +A G  +  A+T +G ++++G GS   LG G   D L P  +      G+ VV V+  +
Sbjct: 534 NVACGSHHSAAITASGELFTWGRGSFGRLGLGSTEDILTPALVSGLL--GVTVVDVACGS 591

Query: 331 GDEHVVALDSSGYV 344
           GD   +AL  +G V
Sbjct: 592 GDAQTIALADTGSV 605



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 52/174 (29%), Positives = 77/174 (44%), Gaps = 4/174 (2%)

Query: 118  TGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL I++  SV+S G    G LG G  +  C    +I+      V++V      + 
Sbjct: 4136 SGDAQTLCITDDDSVWSWGDGDYGKLGRG-GSDGCKVPMKIDALQGLGVIKVECGSQFSV 4194

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH  T   I RPR    L+G     +  G       T  G 
Sbjct: 4195 ALTKSGAVYTWGKGDYHRLGH-GTEDHIRRPRRCTTLQGKKIVSIACGSLHCVACTDAGE 4253

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            V+T G N  GQLG G T     P+ +A L+    + ++A G ++ LA + N  V
Sbjct: 4254 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKINRVACGSAHSLAWSTNKPV 4306



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 68/149 (45%), Gaps = 3/149 (2%)

Query: 118 TGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   T+ ++++ SV+S G    G LG G  +  C +   ++      V +V     ++A
Sbjct: 591 SGDAQTIALADTGSVYSWGDGEYGKLGRG-GSEGCKAPKLVDKLQGLDVTRVYCGPQYSA 649

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            V ++G VFT G+   +  GH  T   +  PR VE L G     ++ G +     T  G 
Sbjct: 650 AVCKNGAVFTWGNGEGYKLGH-GTEEHVRFPRQVETLAGKHVTSLSLGSHHCLATTEEGE 708

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPL 265
           + + G N  GQLG G T  +  P   A L
Sbjct: 709 LLSWGRNDKGQLGEGHTGLKAEPAFAASL 737


>gi|405954128|gb|EKC21651.1| Putative E3 ubiquitin-protein ligase HERC1 [Crassostrea gigas]
          Length = 826

 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 75/234 (32%), Positives = 126/234 (53%), Gaps = 14/234 (5%)

Query: 115 QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS-- 171
           Q+  G++ T LI S+ +V +CG    G LG G ++  C S  +       +V ++S+S  
Sbjct: 432 QVEAGQFCTFLIYSDGTVGACGKGSYGRLGLG-DSNNC-SVPKKPLFDKKYVKKISSSKG 489

Query: 172 -ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTG 229
            + H+  +  +G+V++ GD      GH  T+     P+LV+  L G   K V+AG   + 
Sbjct: 490 SDGHSLALTTTGEVYSWGDGDYGKLGH-GTHSTQKIPKLVKGPLVGKVVKCVSAGYRHSA 548

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG- 288
            +T  G ++T G    G+LGH  T  +  P  +  +E VG V   A G S+ LAV+ +G 
Sbjct: 549 AVTEDGELYTWGDGEFGRLGHDYTSSKNFPTKVQSIESVGLV---ACGGSHTLAVSQDGK 605

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            ++SFG G N  LGHG+ + +L+P+ I+     G+++ +V+ G +  +A+ SSG
Sbjct: 606 TIWSFGGGENGKLGHGDTNRQLKPKVIEALN--GLYIRKVACGSQSSLAVTSSG 657



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 72/220 (32%), Positives = 115/220 (52%), Gaps = 11/220 (5%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           H+L L +   V+S G    G LGHG  +TQ +    +  P    VV+ VSA   H+A V 
Sbjct: 493 HSLALTTTGEVYSWGDGDYGKLGHGTHSTQKIP-KLVKGPLVGKVVKCVSAGYRHSAAVT 551

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VH 238
           + G+++T GD      GH  T+   F P  V++++ V    V  G + T  ++  G  + 
Sbjct: 552 EDGELYTWGDGEFGRLGHDYTSSKNF-PTKVQSIESVGL--VACGGSHTLAVSQDGKTIW 608

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           + G   +G+LGHGDT  +  PK I  L  +  + ++A G    LAVT +G +Y++G G+ 
Sbjct: 609 SFGGGENGKLGHGDTNRQLKPKVIEALNGL-YIRKVACGSQSSLAVTSSGQLYAWGCGAI 667

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
              G  E +  L+PR ++  + K   +V ++ GD HV+AL
Sbjct: 668 LGCGSAE-YTALRPRLVEDLQSK--RMVDIACGDSHVIAL 704



 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 58/232 (25%), Positives = 106/232 (45%), Gaps = 32/232 (13%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ----VSASENHA 175
           R+   +  +  +++ G    G LGH   +++       NFP+    ++    V+   +H 
Sbjct: 545 RHSAAVTEDGELYTWGDGEFGRLGHDYTSSK-------NFPTKVQSIESVGLVACGGSHT 597

Query: 176 AFVLQSGQ-VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
             V Q G+ +++ G   +   GH DTNR + +P+++EAL G+  ++V  G   +  +T  
Sbjct: 598 LAVSQDGKTIWSFGGGENGKLGHGDTNRQL-KPKVIEALNGLYIRKVACGSQSSLAVTSS 656

Query: 235 GHVHT--------CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
           G ++         CGS  +  L          P+ +  L+    +V IA G S+++A+T 
Sbjct: 657 GQLYAWGCGAILGCGSAEYTAL---------RPRLVEDLQS-KRMVDIACGDSHVIALTH 706

Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
              VY++G+ +    G G     +  R  +     G+ V +VSAG  H VA 
Sbjct: 707 ESEVYAWGNNAMGQCGQGHAQSPIT-RPKRVIGLDGVSVHQVSAGTSHSVAW 757



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/173 (30%), Positives = 81/173 (46%), Gaps = 7/173 (4%)

Query: 116 ITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           +  G  HTL +S    +++S G    G LGHG +T + +    I   +  ++ +V+    
Sbjct: 590 VACGGSHTLAVSQDGKTIWSFGGGENGKLGHG-DTNRQLKPKVIEALNGLYIRKVACGSQ 648

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
            +  V  SGQ++  G  +   CG  +      RPRLVE L+      +  G +    LT 
Sbjct: 649 SSLAVTSSGQLYAWGCGAILGCGSAEYT--ALRPRLVEDLQSKRMVDIACGDSHVIALTH 706

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVT 285
              V+  G+N  GQ G G      T PK +  L+ V SV Q++AG S+ +A T
Sbjct: 707 ESEVYAWGNNAMGQCGQGHAQSPITRPKRVIGLDGV-SVHQVSAGTSHSVAWT 758



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/180 (30%), Positives = 80/180 (44%), Gaps = 15/180 (8%)

Query: 169 SASENHAAFVLQSGQVFTCGDNSSFCCGHR---DTNRPIFRPRLVEALKGVPCKQVTAGL 225
           S S ++A      G+V+  G N    C H+        I  P+         C+QV AG 
Sbjct: 384 STSHSNANLSGSCGEVYVWGSN----CTHQLAEGGQEKITTPKYSAVF--TDCQQVEAGQ 437

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP---SYML 282
             T  +   G V  CG  ++G+LG GD+ +   PK   PL +   V +I++      + L
Sbjct: 438 FCTFLIYSDGTVGACGKGSYGRLGLGDSNNCSVPKK--PLFDKKYVKKISSSKGSDGHSL 495

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           A+T  G VYS+G G    LGHG    +  P+ ++     G  V  VSAG  H  A+   G
Sbjct: 496 ALTTTGEVYSWGDGDYGKLGHGTHSTQKIPKLVKG-PLVGKVVKCVSAGYRHSAAVTEDG 554



 Score = 41.2 bits (95), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 27/113 (23%), Positives = 51/113 (45%), Gaps = 7/113 (6%)

Query: 115 QITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS 171
           ++  G   +L +++S     + CG+    +LG G      +    +    +  +V ++  
Sbjct: 642 KVACGSQSSLAVTSSGQLYAWGCGA----ILGCGSAEYTALRPRLVEDLQSKRMVDIACG 697

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           ++H   +    +V+  G+N+   CG      PI RP+ V  L GV   QV+AG
Sbjct: 698 DSHVIALTHESEVYAWGNNAMGQCGQGHAQSPITRPKRVIGLDGVSVHQVSAG 750


>gi|363733282|ref|XP_420476.3| PREDICTED: E3 ISG15--protein ligase HERC5 [Gallus gallus]
          Length = 560

 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 55/172 (31%), Positives = 93/172 (54%), Gaps = 3/172 (1%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +VQ++  ++H+  + + G +FT G N+    G    +  I +P+LV+ LKG+P  Q+ AG
Sbjct: 85  IVQIACGDHHSMALSRGGSLFTWGQNTHGQLGVGSQDLLISKPQLVKGLKGIPLAQIAAG 144

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
              +  +++ G V++ G N  GQLG G T DR  P  +  LE   +V  I+ G  +   +
Sbjct: 145 GAHSVVVSLSGAVYSWGKNDFGQLGLGHTEDRDCPSYVEALEHWKAVF-ISCGEDHTAVL 203

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
           + NG+V++FG+G    LGH    +E +PR +      G  V  V+ G +H +
Sbjct: 204 SKNGLVFTFGAGGAGQLGHNSTRNEFRPRMVAELW--GARVSLVACGRQHTL 253



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/192 (27%), Positives = 84/192 (43%), Gaps = 17/192 (8%)

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRP--IFRPRLVEAL 213
           R+ F     V  ++  E H       G+++ C            T  P    + RLV+ L
Sbjct: 32  RVWFKGKEKVWCLNCDETHVLVCSCDGKLYECW-----------TTAPGKTSKLRLVKEL 80

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVV 272
           +     Q+  G + +  L+  G + T G NTHGQLG G   L    P+ +  L+ +  + 
Sbjct: 81  ENNDIVQIACGDHHSMALSRGGSLFTWGQNTHGQLGVGSQDLLISKPQLVKGLKGI-PLA 139

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
           QIAAG ++ + V+ +G VYS+G      LG G   D   P  ++         V +S G+
Sbjct: 140 QIAAGGAHSVVVSLSGAVYSWGKNDFGQLGLGHTEDRDCPSYVEALEH--WKAVFISCGE 197

Query: 333 EHVVALDSSGYV 344
           +H   L  +G V
Sbjct: 198 DHTAVLSKNGLV 209


>gi|356508943|ref|XP_003523212.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
           max]
          Length = 441

 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 70/231 (30%), Positives = 113/231 (48%), Gaps = 7/231 (3%)

Query: 116 ITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           I  G  HTL  S S   ++S G    G LGHG  +   +    I       + Q++  ++
Sbjct: 71  IACGADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPIIAL-QGLRIKQIACGDS 129

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H   V   G+V + G N +   G  +T   +  P+ ++A KGVP K V AG   +  +T 
Sbjct: 130 HCLAVTMEGEVQSWGRNQNGQLGLGNTEDSLV-PQKIQAFKGVPIKMVAAGAEHSVAITE 188

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G ++  G   +G LG GD  DR  P+ ++ + +   +V +A G  + ++V+ +G +Y++
Sbjct: 189 NGELYGWGWGRYGNLGLGDRNDRWNPEKVSSV-DCDKMVMVACGWRHTISVSSSGGIYTY 247

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G      LGHG   D L P+ +Q    K I   +VS G  H +AL S+G +
Sbjct: 248 GWSKYGQLGHGNFEDSLVPQKLQALSDKLIS--QVSGGWRHSMALTSTGLL 296



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/182 (34%), Positives = 92/182 (50%), Gaps = 7/182 (3%)

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQV 221
           + V+ +SA  +H   +L    V + G       GH DT+ RP+  P  + AL       +
Sbjct: 14  SRVLLISAGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRPL--PTQLSALDAQHIDSI 71

Query: 222 TAGLNFT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
             G + T  +   R  +++ G    G+LGHG++ D   P+ I  L+ +  + QIA G S+
Sbjct: 72  ACGADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPIIALQGL-RIKQIACGDSH 130

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            LAVT  G V S+G   N  LG G   D L P+ IQ F  KG+ +  V+AG EH VA+  
Sbjct: 131 CLAVTMEGEVQSWGRNQNGQLGLGNTEDSLVPQKIQAF--KGVPIKMVAAGAEHSVAITE 188

Query: 341 SG 342
           +G
Sbjct: 189 NG 190



 Score = 74.7 bits (182), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 60/209 (28%), Positives = 98/209 (46%), Gaps = 6/209 (2%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  H++ I+ N  ++  G    G LG G    +  +  +++      +V V+    H
Sbjct: 176 VAAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRW-NPEKVSSVDCDKMVMVACGWRH 234

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V  SG ++T G +     GH +    +  P+ ++AL      QV+ G   +  LT  
Sbjct: 235 TISVSSSGGIYTYGWSKYGQLGHGNFEDSLV-PQKLQALSDKLISQVSGGWRHSMALTST 293

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
           G +   G N  GQ+G GD LD  +P  +  P ++   VVQI+ G  + +AVT    V+S+
Sbjct: 294 GLLFGWGWNKFGQVGVGDNLDHCSPVQVKFPQDQ--RVVQISCGWRHTIAVTEKENVFSW 351

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           G G+N  LGHG+  D   P+ I+     G
Sbjct: 352 GRGTNGQLGHGDTIDRNSPKIIEALSVDG 380



 Score = 60.8 bits (146), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 53/166 (31%), Positives = 79/166 (47%), Gaps = 8/166 (4%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + +  G  HT+ +S+S  +++ G S  G LGHG      V   ++   S   + QVS   
Sbjct: 226 VMVACGWRHTISVSSSGGIYTYGWSKYGQLGHGNFEDSLVP-QKLQALSDKLISQVSGGW 284

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  +G +F  G N     G  D N     P  V+  +     Q++ G   T  +T
Sbjct: 285 RHSMALTSTGLLFGWGWNKFGQVGVGD-NLDHCSPVQVKFPQDQRVVQISCGWRHTIAVT 343

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
            + +V + G  T+GQLGHGDT+DR +PK I  L   GS     AGP
Sbjct: 344 EKENVFSWGRGTNGQLGHGDTIDRNSPKIIEALSVDGS-----AGP 384


>gi|417407153|gb|JAA50201.1| Putative e3 ubiquitin-protein ligase herc1 [Desmodus rotundus]
          Length = 4846

 Score = 95.5 bits (236), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 75/237 (31%), Positives = 124/237 (52%), Gaps = 14/237 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4016 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4074

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4075 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4133

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4134 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4190

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             VV++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+V
Sbjct: 4191 SVVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHV 4245



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 68/222 (30%), Positives = 116/222 (52%), Gaps = 13/222 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
           V+SFG G N  LGHG+ +   +P+ I+    +G+ + +V AG
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEAL--QGMFIRKVCAG 622



 Score = 84.7 bits (208), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 70/225 (31%), Positives = 110/225 (48%), Gaps = 7/225 (3%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 4078 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTS 4136

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV-HT 239
             G++FT G+      G  +T+     P  V AL+G    QV  GLN T  ++  G V   
Sbjct: 4137 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSVVWA 4195

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ +  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 4196 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 4254

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             L  G   +  +P+ I      G+ +  V+ G EH +AL S+G V
Sbjct: 4255 GLPEGRARNHNRPQQIPVL--AGVVIEDVAVGAEHTLALASTGDV 4297



 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 110/234 (47%), Gaps = 38/234 (16%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS----AAHVVQVSASENHA 175
           R+   +  +  +++ G    G LGHG   ++       N P+     ++V +VS   +H 
Sbjct: 521 RHSAAVTEDGELYTWGEGDFGRLGHGDSNSR-------NIPTLVKDISNVGEVSCGSSHT 573

Query: 176 AFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             + + G+    F  GDN     GH DTNR +++P+++EAL+G+  ++V AG   +  LT
Sbjct: 574 IALSKDGRTVWSFGGGDNGKL--GHGDTNR-VYKPKVIEALQGMFIRKVCAGSQSSLSLT 630

Query: 233 IRGHVHT--------CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             G V+         CGS+    L          PK I  L     +V I+ G S+ LA+
Sbjct: 631 STGQVYAWGCGACLGCGSSEATAL---------RPKLIEELAAT-RIVDISIGDSHCLAL 680

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           + +  VY++G+ S    G G     + +P+ +      GI + ++SAG  H +A
Sbjct: 681 SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGL--DGIAIQQISAGTSHSLA 732



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 104/229 (45%), Gaps = 13/229 (5%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ ++ S+  +F+ G+   G LG G  + + +   R+       + QV+   
Sbjct: 4122 VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 4180

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G V   F  GD      G+         P+ V+ L G+  K+V  G  F+ 
Sbjct: 4181 NHTLAVSADGSVVWAFGDGDYGKLGLGNSTAKS---SPQKVDVLCGIGIKKVACGTQFSV 4237

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNG 288
             LT  GHV+T G +    L  G   +   P+ I  L   G V++ +A G  + LA+   G
Sbjct: 4238 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVL--AGVVIEDVAVGAEHTLALASTG 4295

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             VY++GS S   LG G  +   +P  +   + K I   ++SAG  H  A
Sbjct: 4296 DVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIR--QISAGRCHSAA 4342



 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 84/189 (44%), Gaps = 14/189 (7%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSG 342
           H +AL   G
Sbjct: 572 HTIALSKDG 580



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 65/128 (50%), Gaps = 4/128 (3%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 4015 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4074

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H  
Sbjct: 4075 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 4132

Query: 337  ALDSSGYV 344
             + S G +
Sbjct: 4133 VVTSDGKL 4140



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 84/175 (48%), Gaps = 7/175 (4%)

Query: 115 QITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++ G  HT+ +S    +V+S G    G LGHG +T +      I       + +V A  
Sbjct: 565 EVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEALQGMFIRKVCAGS 623

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             +  +  +GQV+  G  +   CG  +      RP+L+E L       ++ G +    L+
Sbjct: 624 QSSLSLTSTGQVYAWGCGACLGCGSSEAT--ALRPKLIEELAATRIVDISIGDSHCLALS 681

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
               V+  G+N+ GQ G G++    T PK ++ L+ + ++ QI+AG S+ LA T 
Sbjct: 682 HDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI-AIQQISAGTSHSLAWTA 735



 Score = 47.8 bits (112), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 79/180 (43%), Gaps = 11/180 (6%)

Query: 115  QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HTL +S   S V++ G    G LG G  T +  S  +++      + +V+   
Sbjct: 4175 QVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGNSTAKS-SPQKVDVLCGIGIKKVACGT 4233

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + +  L GV  + V  G   T 
Sbjct: 4234 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQIPVLAGVVIEDVAVGAEHTL 4289

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L   G V+  GSN+ GQLG G T     P  +  L+   ++ QI+AG  +  A T   V
Sbjct: 4290 ALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQG-KNIRQISAGRCHSAAWTAPPV 4348


>gi|417407155|gb|JAA50202.1| Putative e3 ubiquitin-protein ligase herc1 [Desmodus rotundus]
          Length = 4853

 Score = 95.5 bits (236), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 75/237 (31%), Positives = 124/237 (52%), Gaps = 14/237 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4023 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4081

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4082 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4140

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4141 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4197

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             VV++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+V
Sbjct: 4198 SVVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHV 4252



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 68/222 (30%), Positives = 116/222 (52%), Gaps = 13/222 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
           V+SFG G N  LGHG+ +   +P+ I+    +G+ + +V AG
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEAL--QGMFIRKVCAG 622



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 70/225 (31%), Positives = 110/225 (48%), Gaps = 7/225 (3%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 4085 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTS 4143

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV-HT 239
             G++FT G+      G  +T+     P  V AL+G    QV  GLN T  ++  G V   
Sbjct: 4144 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSVVWA 4202

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ +  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 4203 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 4261

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             L  G   +  +P+ I      G+ +  V+ G EH +AL S+G V
Sbjct: 4262 GLPEGRARNHNRPQQIPVL--AGVVIEDVAVGAEHTLALASTGDV 4304



 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 110/234 (47%), Gaps = 38/234 (16%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS----AAHVVQVSASENHA 175
           R+   +  +  +++ G    G LGHG   ++       N P+     ++V +VS   +H 
Sbjct: 521 RHSAAVTEDGELYTWGEGDFGRLGHGDSNSR-------NIPTLVKDISNVGEVSCGSSHT 573

Query: 176 AFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             + + G+    F  GDN     GH DTNR +++P+++EAL+G+  ++V AG   +  LT
Sbjct: 574 IALSKDGRTVWSFGGGDNGKL--GHGDTNR-VYKPKVIEALQGMFIRKVCAGSQSSLSLT 630

Query: 233 IRGHVHT--------CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             G V+         CGS+    L          PK I  L     +V I+ G S+ LA+
Sbjct: 631 STGQVYAWGCGACLGCGSSEATAL---------RPKLIEELAAT-RIVDISIGDSHCLAL 680

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           + +  VY++G+ S    G G     + +P+ +      GI + ++SAG  H +A
Sbjct: 681 SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGL--DGIAIQQISAGTSHSLA 732



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 104/229 (45%), Gaps = 13/229 (5%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ ++ S+  +F+ G+   G LG G  + + +   R+       + QV+   
Sbjct: 4129 VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 4187

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G V   F  GD      G+         P+ V+ L G+  K+V  G  F+ 
Sbjct: 4188 NHTLAVSADGSVVWAFGDGDYGKLGLGNSTAKS---SPQKVDVLCGIGIKKVACGTQFSV 4244

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNG 288
             LT  GHV+T G +    L  G   +   P+ I  L   G V++ +A G  + LA+   G
Sbjct: 4245 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVL--AGVVIEDVAVGAEHTLALASTG 4302

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             VY++GS S   LG G  +   +P  +   + K I   ++SAG  H  A
Sbjct: 4303 DVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIR--QISAGRCHSAA 4349



 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 84/189 (44%), Gaps = 14/189 (7%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSG 342
           H +AL   G
Sbjct: 572 HTIALSKDG 580



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 65/128 (50%), Gaps = 4/128 (3%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 4022 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4081

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H  
Sbjct: 4082 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 4139

Query: 337  ALDSSGYV 344
             + S G +
Sbjct: 4140 VVTSDGKL 4147



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 84/175 (48%), Gaps = 7/175 (4%)

Query: 115 QITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++ G  HT+ +S    +V+S G    G LGHG +T +      I       + +V A  
Sbjct: 565 EVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEALQGMFIRKVCAGS 623

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             +  +  +GQV+  G  +   CG  +      RP+L+E L       ++ G +    L+
Sbjct: 624 QSSLSLTSTGQVYAWGCGACLGCGSSEAT--ALRPKLIEELAATRIVDISIGDSHCLALS 681

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
               V+  G+N+ GQ G G++    T PK ++ L+ + ++ QI+AG S+ LA T 
Sbjct: 682 HDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI-AIQQISAGTSHSLAWTA 735



 Score = 47.8 bits (112), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 79/180 (43%), Gaps = 11/180 (6%)

Query: 115  QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HTL +S   S V++ G    G LG G  T +  S  +++      + +V+   
Sbjct: 4182 QVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGNSTAKS-SPQKVDVLCGIGIKKVACGT 4240

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + +  L GV  + V  G   T 
Sbjct: 4241 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQIPVLAGVVIEDVAVGAEHTL 4296

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L   G V+  GSN+ GQLG G T     P  +  L+   ++ QI+AG  +  A T   V
Sbjct: 4297 ALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQG-KNIRQISAGRCHSAAWTAPPV 4355


>gi|301115610|ref|XP_002905534.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
 gi|262110323|gb|EEY68375.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
          Length = 456

 Score = 95.5 bits (236), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 112/226 (49%), Gaps = 21/226 (9%)

Query: 119 GRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 177
           G +HT+ L  +  +++ G+   G LG+G E+  C     I F S  +VV ++A  + +  
Sbjct: 230 GEFHTVALTKDGEIWAWGNGEYGRLGNG-ESDTCEVPEPIEFFSKDNVVSIAAGRDFSFA 288

Query: 178 VLQSGQVFTCGDNSSFCCG-----HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           +   G++++ G NS    G       D       P LVEA  G+  KQ+ AG +    +T
Sbjct: 289 LTDKGELYSWGGNSQNQLGIGGGLAMDVYNIESIPVLVEAFNGLLVKQIAAGYDHAAAVT 348

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G ++  G+    +           P  +  + E   + Q+A G  Y + +T +G V++
Sbjct: 349 EDGRLYMWGAKIWIE-----------PHEMTAVNE-HKMTQVACGRQYTVGLTDDGKVFT 396

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           FG GS+ CLGHG++ ++LQP  IQ     G+++  VS GD H+ A+
Sbjct: 397 FGKGSSNCLGHGDRKNQLQPVKIQAL--AGVNITSVSCGDYHMGAI 440



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 106/244 (43%), Gaps = 45/244 (18%)

Query: 127 SNSSVFSCGSSLCGVLGHG---------------PETTQCVSFTRINFPSAAHVVQVSAS 171
           + SSV++ G+   G LGHG               P+ T+ +            +  V   
Sbjct: 67  TQSSVYTWGNGTLGQLGHGSVIKSGIRSAYEELTPKLTEALE--------GKAITHVEFG 118

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
            +H+A + + G+++  G N     G  +++     PR VEALKG+    V+ G  FT  +
Sbjct: 119 ASHSAAIDEEGKLYVWGSNEYSKLGLGESSEMETLPREVEALKGIKIVDVSCGDYFTAAV 178

Query: 232 TIRGHVHTCGSNTHGQLGHGDTL------------DRPTPKSIAPLEEVG-SVVQIAAGP 278
              G +++ G         G T+            D PTP+ +  L + G  +  +  G 
Sbjct: 179 DEDGKMYSWGWG-------GSTMKGAGGLGHAGGKDEPTPRLLTTLVDQGVPIATVECGE 231

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            + +A+T +G ++++G+G    LG+GE      P  I+ F +   +VV ++AG +   AL
Sbjct: 232 FHTVALTKDGEIWAWGNGEYGRLGNGESDTCEVPEPIEFFSKD--NVVSIAAGRDFSFAL 289

Query: 339 DSSG 342
              G
Sbjct: 290 TDKG 293



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 88/183 (48%), Gaps = 15/183 (8%)

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR-------PRLVEALKGVPCKQVTAGLNF 227
           A++  QS  V+T G+ +    GH    +   R       P+L EAL+G     V  G + 
Sbjct: 63  ASYATQS-SVYTWGNGTLGQLGHGSVIKSGIRSAYEELTPKLTEALEGKAITHVEFGASH 121

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
           +  +   G ++  GSN + +LG G++ +  T P+ +  L+ +  +V ++ G  +  AV  
Sbjct: 122 SAAIDEEGKLYVWGSNEYSKLGLGESSEMETLPREVEALKGI-KIVDVSCGDYFTAAVDE 180

Query: 287 NGVVYSFGSGSN-----FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           +G +YS+G G +       LGH    DE  PR + T   +G+ +  V  G+ H VAL   
Sbjct: 181 DGKMYSWGWGGSTMKGAGGLGHAGGKDEPTPRLLTTLVDQGVPIATVECGEFHTVALTKD 240

Query: 342 GYV 344
           G +
Sbjct: 241 GEI 243


>gi|126330678|ref|XP_001365078.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Monodelphis
           domestica]
          Length = 1051

 Score = 95.5 bits (236), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 110/227 (48%), Gaps = 7/227 (3%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 44  GNHSIFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 100

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    GH  T   +  PRL++ L      QV+ G      L   G   
Sbjct: 101 SDQGQLFSWGAGSDGQLGHTTTEDSVAIPRLIKKLNQQMILQVSCGNWHCMALAADGQFF 160

Query: 239 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 161 TWGQNRHGQLGLGKEFPSQASPQRVKSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGRNN 219

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V
Sbjct: 220 AGQLGLSDETDRQSPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGV 264



 Score = 95.1 bits (235), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 75/234 (32%), Positives = 114/234 (48%), Gaps = 7/234 (2%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LGH   T   V+  R I   +   ++QVS  
Sbjct: 88  IHVACGESHSLALSDQGQLFSWGAGSDGQLGH-TTTEDSVAIPRLIKKLNQQMILQVSCG 146

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G N     G          P+ V++L+G+P  QV AG   +  L
Sbjct: 147 NWHCMALAADGQFFTWGQNRHGQLGLGKEFPSQASPQRVKSLEGIPLAQVAAGGAHSFAL 206

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 207 SLSGAVFGWGRNNAGQLGLSDETDRQSPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVF 265

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYV 344
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +
Sbjct: 266 TFGAGSFGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLI 317



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 65/195 (33%), Positives = 97/195 (49%), Gaps = 8/195 (4%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++ G +H + L ++   F+ G +  G LG G E     S  R+       + QV+A  
Sbjct: 141 LQVSCGNWHCMALAADGQFFTWGQNRHGQLGLGKEFPSQASPQRVKSLEGIPLAQVAAGG 200

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
            H+  +  SG VF  G N++   G  D T+R    P  V+ L+      ++ G   T  L
Sbjct: 201 AHSFALSLSGAVFGWGRNNAGQLGLSDETDRQ--SPCHVKLLRTQKVVYISCGEEHTAVL 258

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGNGV 289
           T  G V T G+ + GQLGH    D   P+ +  LE +GS V QIA G  + LA V  +G+
Sbjct: 259 TKSGGVFTFGAGSFGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGL 316

Query: 290 VYSFGSGSNFCLGHG 304
           +Y+FG G+   LG G
Sbjct: 317 IYAFGCGARGQLGTG 331



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 100/189 (52%), Gaps = 10/189 (5%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   + +V+   NH+ F+L+ G+V+TCG N+    GH R+ N    +P  + AL    
Sbjct: 31  FISDRSIKEVACGGNHSIFLLEDGEVYTCGLNTKGQLGHEREGN----KPEQIGALADQH 86

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ +G + + G+ + GQLGH  T D    P+ I  L +   ++Q++ 
Sbjct: 87  IIHVACGESHSLALSDQGQLFSWGAGSDGQLGHTTTEDSVAIPRLIKKLNQ-QMILQVSC 145

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + +A+  +G  +++G   +  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 146 GNWHCMALAADGQFFTWGQNRHGQLGLGKEFPSQASPQRVKSL--EGIPLAQVAAGGAHS 203

Query: 336 VALDSSGYV 344
            AL  SG V
Sbjct: 204 FALSLSGAV 212


>gi|307204521|gb|EFN83201.1| Probable E3 ubiquitin-protein ligase HERC2 [Harpegnathos saltator]
          Length = 4791

 Score = 95.1 bits (235), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 73/231 (31%), Positives = 111/231 (48%), Gaps = 13/231 (5%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSASENHA 175
            G++   L  +  VFS G    G LGHG     C +  +   I    +  +  ++    H+
Sbjct: 3047 GKHALALTQDGKVFSWGEGEDGKLGHG----NCTTLDKPRLIESLKSKRIRDIACGSGHS 3102

Query: 176  AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTI 233
            A +  +G+++T G       GH DT   + +P+LV+AL G    QV  G     T  LT 
Sbjct: 3103 AAIASNGELYTWGLGEYGRLGHGDTATQM-KPKLVQALSGQRVVQVACGSRDAQTMSLTA 3161

Query: 234  RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
             G V+T G    G+LG G +    TP  +  L  +G VVQ+  G  + LA+T  G V+++
Sbjct: 3162 DGCVYTWGDGDFGKLGRGGSDGCYTPLLVDRLNGLG-VVQVECGAQFSLALTKYGEVWTW 3220

Query: 294  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            G G  F LGHG  H   +P  ++  R  G  +V V+ G  H +A+  +G V
Sbjct: 3221 GKGDYFRLGHGNDHHVRKPTLVEGLR--GKKIVHVAVGALHCLAVTDTGQV 3269



 Score = 84.0 bits (206), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 70/232 (30%), Positives = 108/232 (46%), Gaps = 11/232 (4%)

Query: 119  GRYHTLLI--SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV--VQVSASENH 174
            G   TL I      +++CG    G LG G +   C     I F S   +  V V +   H
Sbjct: 2991 GGSKTLFIVSQEGKLYACGEGTNGRLGLGDDYNMC-EPKLIPFLSQYVIKKVAVHSGGKH 3049

Query: 175  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
            A  + Q G+VF+ G+      GH +    + +PRL+E+LK    + +  G   +  +   
Sbjct: 3050 ALALTQDGKVFSWGEGEDGKLGHGNCTT-LDKPRLIESLKSKRIRDIACGSGHSAAIASN 3108

Query: 235  GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG--PSYMLAVTGNGVVYS 292
            G ++T G   +G+LGHGDT  +  PK +  L     VVQ+A G   +  +++T +G VY+
Sbjct: 3109 GELYTWGLGEYGRLGHGDTATQMKPKLVQALSG-QRVVQVACGSRDAQTMSLTADGCVYT 3167

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            +G G    LG G       P  +   R  G+ VV+V  G +  +AL   G V
Sbjct: 3168 WGDGDFGKLGRGGSDGCYTPLLVD--RLNGLGVVQVECGAQFSLALTKYGEV 3217



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 113/230 (49%), Gaps = 7/230 (3%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           + G+++  L  +  V+S G+   G LGHG   +       I      +++ ++    ++A
Sbjct: 516 SDGKHYLALTQDGCVYSWGNGDGGRLGHGDNISH-DEPKLIETLLEKNIIFIACGSTYSA 574

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIR 234
            +  SG+++T G  +    GH  +N  +  P LV  LKG     V   +G + T  +T  
Sbjct: 575 ALSASGELYTWGRGNYGRLGH-GSNDDVTVPTLVTTLKGHMVVHVACGSGDSQTLCVTAS 633

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G V + G   +G+LG G +    TPK +  L ++ +VV++  G  +  A+T  G VY++G
Sbjct: 634 GIVFSWGDGDYGKLGRGGSDGSKTPKIVDKLLDI-NVVRVFCGGQFSAALTARGEVYTWG 692

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            G  + LGHG +     P+ I++ R K I    +S G  H++AL    +V
Sbjct: 693 KGDAYRLGHGNEEHVRYPKLIESLRDKKIK--DLSVGGTHILALTEDQFV 740



 Score = 80.9 bits (198), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 68/255 (26%), Positives = 116/255 (45%), Gaps = 20/255 (7%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSF 154
             L+S++H           + + +G  H L +S+   V+S G    G LGHG      +S+
Sbjct: 4010 LLESIQH------VFIKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNR----LSY 4059

Query: 155  TRINFPS---AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE 211
             R           +V ++   +H+A +  +G ++T G       GH D++  + RP++VE
Sbjct: 4060 DRPKLVEDLLGIEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQL-RPKVVE 4118

Query: 212  ALKGVPCKQVTAGLNFTGFL--TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 269
            AL+      V  G      L  T   +V + G   +G+LG G +     P  I  L  +G
Sbjct: 4119 ALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLG 4178

Query: 270  SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
             V+++  G  + +A+T +G VY++G G    LGHG      +PR +     +G  ++ ++
Sbjct: 4179 -VIKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRKVAAL--QGKKIISIA 4235

Query: 330  AGDEHVVALDSSGYV 344
             G  H VA    G V
Sbjct: 4236 TGSLHCVACSDKGEV 4250



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 107/227 (47%), Gaps = 15/227 (6%)

Query: 125  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV----VQVSASENHAAFVLQ 180
            + ++  V+S G    G LG G   +  V        S  HV    V V++   H   +  
Sbjct: 3980 VTADGKVYSTGYGAAGRLGIGGTDSVMVPTL---LESIQHVFIKKVAVNSGGKHCLALSS 4036

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             G V++ G+      GH   NR  + RP+LVE L G+    +  G + +  +T  G ++T
Sbjct: 4037 EGHVYSWGEGDDGKLGH--GNRLSYDRPKLVEDLLGIEIVDIACGGHHSAAITSAGWLYT 4094

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLAVTGNGVVYSFGSGS 297
             G   +G+LGHGD+ D+  PK +  L++   V+ +A  +G +  L VT +  V+S+G G 
Sbjct: 4095 WGKGRYGRLGHGDSDDQLRPKVVEALQDY-KVIDVACGSGDAQTLCVTDDDNVWSWGDGD 4153

Query: 298  NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
               LG G       P  I +    G+ V++V  G +  VAL  SG V
Sbjct: 4154 YGKLGRGGSDGCKVPLKIDSL--AGLGVIKVECGSQFSVALTRSGAV 4198



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 53/177 (29%), Positives = 84/177 (47%), Gaps = 5/177 (2%)

Query: 167  QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
            QV+A  +  A   QS  V+  G N     G    ++ I  P   E L  +    +  G  
Sbjct: 2937 QVTAQRSTDAPPQQSA-VYVWGLNDKDQLGGLKGSK-IKIPVRSEVLSKLKPIHIAGGSK 2994

Query: 227  FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVT 285
                ++  G ++ CG  T+G+LG GD  +   PK I  L + V   V + +G  + LA+T
Sbjct: 2995 TLFIVSQEGKLYACGEGTNGRLGLGDDYNMCEPKLIPFLSQYVIKKVAVHSGGKHALALT 3054

Query: 286  GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
             +G V+S+G G +  LGHG      +PR I++ + K I    ++ G  H  A+ S+G
Sbjct: 3055 QDGKVFSWGEGEDGKLGHGNCTTLDKPRLIESLKSKRIR--DIACGSGHSAAIASNG 3109



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 87/196 (44%), Gaps = 14/196 (7%)

Query: 125  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
            L ++  V++ G    G LG G  +  C +   ++  +   VVQV      +  + + G+V
Sbjct: 3159 LTADGCVYTWGDGDFGKLGRG-GSDGCYTPLLVDRLNGLGVVQVECGAQFSLALTKYGEV 3217

Query: 185  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
            +T G    F  GH + +  + +P LVE L+G     V  G      +T  G V+  G N 
Sbjct: 3218 WTWGKGDYFRLGHGNDHH-VRKPTLVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDND 3276

Query: 245  HGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA-------VTGNGVVYSFGSGS 297
            HGQ G+G T+    P  +  L++   + +++ G S+ +A         GN    +F +  
Sbjct: 3277 HGQQGNGTTIVNRKPSLVHELDDT-RMNRVSCGSSHSIAWILVDQPTNGNQEPVTFQTAR 3335

Query: 298  N----FCLGHGEQHDE 309
            +     CLG G   ++
Sbjct: 3336 DPLGQMCLGLGNAAEQ 3351



 Score = 54.3 bits (129), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 77/167 (46%), Gaps = 4/167 (2%)

Query: 118  TGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL +++  +V+S G    G LG G  +  C    +I+  +   V++V      + 
Sbjct: 4132 SGDAQTLCVTDDDNVWSWGDGDYGKLGRG-GSDGCKVPLKIDSLAGLGVIKVECGSQFSV 4190

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH  T+  + RPR V AL+G     +  G       + +G 
Sbjct: 4191 ALTRSGAVYTWGKGDYHRLGH-GTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGE 4249

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V T G N  GQLG G T     P+ +  L+    + ++A G ++ LA
Sbjct: 4250 VFTWGDNDEGQLGDGTTSALQRPRLVHALQG-KKITRVACGSAHTLA 4295



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 59/113 (52%), Gaps = 7/113 (6%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  P P +S++ L  +    Q+A G   + AVT +G VY
Sbjct: 3932 GAIYGWGHNHRGQLGGLEGAKIKLPAPCESLSALRPI----QLAGGEQTLFAVTADGKVY 3987

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            S G G+   LG G     + P  +++ +   I  V V++G +H +AL S G+V
Sbjct: 3988 STGYGAAGRLGIGGTDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSEGHV 4040



 Score = 45.8 bits (107), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 85/190 (44%), Gaps = 22/190 (11%)

Query: 106 IVETSAGNMQI----TTGRYHTLLISNSS-VFSCGSSLCGVLGHG----PETTQCVS-FT 155
           +V T  G+M +     +G   TL ++ S  VFS G    G LG G     +T + V    
Sbjct: 606 LVTTLKGHMVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGSDGSKTPKIVDKLL 665

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
            IN      VV+V      +A +   G+V+T G   ++  GH +    +  P+L+E+L+ 
Sbjct: 666 DIN------VVRVFCGGQFSAALTARGEVYTWGKGDAYRLGHGNEEH-VRYPKLIESLRD 718

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH--GDTLDRPTPKSIAPLEEVGSVVQ 273
              K ++ G      LT    V+  G N +GQ+    G  +  P   S+ P     +V+ 
Sbjct: 719 KKIKDLSVGGTHILALTEDQFVYGWGRNDYGQIDPTLGPVVSEP---SLCPTLSSKNVIG 775

Query: 274 IAAGPSYMLA 283
           +A+GP+   A
Sbjct: 776 LASGPTQSFA 785



 Score = 44.3 bits (103), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 52/110 (47%), Gaps = 5/110 (4%)

Query: 237  VHTCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
            V+  G N   QLG   G  +  P    +  L ++  +  IA G   +  V+  G +Y+ G
Sbjct: 2953 VYVWGLNDKDQLGGLKGSKIKIPVRSEV--LSKLKPI-HIAGGSKTLFIVSQEGKLYACG 3009

Query: 295  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             G+N  LG G+ ++  +P+ I    +  I  V V +G +H +AL   G V
Sbjct: 3010 EGTNGRLGLGDDYNMCEPKLIPFLSQYVIKKVAVHSGGKHALALTQDGKV 3059


>gi|410920940|ref|XP_003973941.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Takifugu
           rubripes]
          Length = 4822

 Score = 95.1 bits (235), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 72/233 (30%), Positives = 111/233 (47%), Gaps = 13/233 (5%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHG-----PETTQCVSFTRINFPSAAHVVQVSASEN 173
           G+++  L SN  VFS G    G LGHG      E T   +F      +  HVV ++    
Sbjct: 490 GQHYLALSSNGEVFSWGCGDGGRLGHGDATYLEEPTMIAAFN--GKQAGKHVVHIACGST 547

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           ++A +   G+++T G  +    GH  +      P LV ALKG+    V  G      L +
Sbjct: 548 YSAVITIDGELYTWGRGNYGRLGHGSSEDQT-TPMLVTALKGLKVVDVACGSGDAQTLAV 606

Query: 234 --RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
              G V + G   +G+LG G +    TPK +  L+++  +V++  G  + +A+T +G VY
Sbjct: 607 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDL-DIVKVCCGSQFSVALTKDGQVY 665

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           ++G G N  LGHG       P+ + T   +G  VV V+ G  H +AL   G V
Sbjct: 666 TWGKGDNQRLGHGTDEHVRFPKLLDTL--QGKKVVDVAVGSTHCLALTDDGEV 716



 Score = 87.4 bits (215), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 72/228 (31%), Positives = 106/228 (46%), Gaps = 7/228 (3%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+   L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3042 GRHAMALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAI 3100

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG++++ G       GH D N    RP+LV+ L G    QV  G     T  LT  G 
Sbjct: 3101 TSSGELYSWGLGEYGRLGHGD-NATQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGL 3159

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3160 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3218

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G V
Sbjct: 3219 DYFRLGHGTDVHVRKPQMVEGLR--GKKIVHVAVGALHCLAVTDTGQV 3264



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 72/235 (30%), Positives = 110/235 (46%), Gaps = 8/235 (3%)

Query: 113  NMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS 171
             + + +G  H L L S   V+S G +  G LGHG   + C     I       VV ++A 
Sbjct: 4029 KVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGVEVVDIAAG 4087

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTG 229
              H+A +  SG++FT G       GH D+   + +P+LV+AL+G     V   +G   T 
Sbjct: 4088 GAHSACITASGELFTWGKGRYGRLGHGDSEDQL-KPKLVDALQGHRVIDVACGSGDAQTL 4146

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             LT    V + G   +G+LG G +     P  I  L  +G V ++  G  + +A+T +G 
Sbjct: 4147 CLTDDDMVWSWGDGDYGKLGRGGSDGCKIPMKIDSLTGLG-VTKVECGSQFSVALTKSGA 4205

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            VY++G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G V
Sbjct: 4206 VYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEV 4258



 Score = 74.3 bits (181), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 57/188 (30%), Positives = 93/188 (49%), Gaps = 7/188 (3%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
            SA +VVQV+        V   G+++ CG+ ++   G   ++  I  PR + AL     K+
Sbjct: 2976 SALNVVQVAGGSKSLFAVTVEGKIYACGEATNGRLGLGLSSGTIPIPRQITALSNYVVKK 3035

Query: 221  VT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
            V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA G 
Sbjct: 3036 VAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIACGS 3094

Query: 279  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVV 336
            S+  A+T +G +YS+G G    LGHG+   +L+P+ ++     G  V++V+ G  D   +
Sbjct: 3095 SHSAAITSSGELYSWGLGEYGRLGHGDNATQLRPKLVKVLL--GHRVIQVACGSRDAQTL 3152

Query: 337  ALDSSGYV 344
            AL   G V
Sbjct: 3153 ALTDEGLV 3160



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 99/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  I++S  ++S G    G LGHG   TQ +    +       V+QV+     
Sbjct: 3090 IACGSSHSAAITSSGELYSWGLGEYGRLGHGDNATQ-LRPKLVKVLLGHRVIQVACGSRD 3148

Query: 175  AAFV--LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A  +     G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3149 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3207

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 3208 KSGVVWTWGKGDYFRLGHGTDVHVRKPQMVEGLRG-KKIVHVAVGALHCLAVTDTGQVYA 3266

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3267 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3309



 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 78/162 (48%), Gaps = 5/162 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G ++ CG 
Sbjct: 2946 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKIYACGE 3004

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  + +A+T +G V+S+G G +  
Sbjct: 3005 ATNGRLGLGLSSGTIPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGK 3064

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            LGH  + +  +PR I+  + K I    ++ G  H  A+ SSG
Sbjct: 3065 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAAITSSG 3104



 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 55/191 (28%), Positives = 86/191 (45%), Gaps = 20/191 (10%)

Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
           S+  V Q+  SE     +  SG V+T    S+              P L+ +L      +
Sbjct: 435 SSLGVTQIVCSEKGFLILSSSGAVYTQNYKST-----------TLAPMLIHSLSSRKIVK 483

Query: 221 VTAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIA 275
           + A  +   +L +   G V + G    G+LGHGD      P  IA    ++ G  VV IA
Sbjct: 484 LAAHPDGQHYLALSSNGEVFSWGCGDGGRLGHGDATYLEEPTMIAAFNGKQAGKHVVHIA 543

Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDE 333
            G +Y   +T +G +Y++G G+   LGHG   D+  P  +     KG+ VV V+  +GD 
Sbjct: 544 CGSTYSAVITIDGELYTWGRGNYGRLGHGSSEDQTTPMLVTAL--KGLKVVDVACGSGDA 601

Query: 334 HVVALDSSGYV 344
             +A+  +G V
Sbjct: 602 QTLAVTENGQV 612



 Score = 54.7 bits (130), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 49/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122  HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 3150 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 3208

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SG V+T G    F  GH  T+  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 3209 SGVVWTWGKGDYFRLGH-GTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQVYAW 3267

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 3268 GDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 3311



 Score = 54.3 bits (129), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 60/229 (26%), Positives = 104/229 (45%), Gaps = 24/229 (10%)

Query: 81  ELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQIT-----TGRYHTLLIS-NSSVFSC 134
           EL     GN+ R L    S + ++ ++ T+   +++      +G   TL ++ N  V+S 
Sbjct: 557 ELYTWGRGNYGR-LGHGSSEDQTTPMLVTALKGLKVVDVACGSGDAQTLAVTENGQVWSW 615

Query: 135 GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFC 194
           G    G LG G  +  C +   +       +V+V      +  + + GQV+T G   +  
Sbjct: 616 GDGDYGKLGRG-GSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQR 674

Query: 195 CGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTL 254
            GH  T+  +  P+L++ L+G     V  G      LT  G VH+ GSN   +L H DTL
Sbjct: 675 LGH-GTDEHVRFPKLLDTLQGKKVVDVAVGSTHCLALTDDGEVHSWGSND--KLQHFDTL 731

Query: 255 -DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
            ++  PK++  L+    +V I+ GP         G  +++ S S + +G
Sbjct: 732 SNKKQPKALPGLKH---IVGISCGP---------GQSFAWSSCSEWSVG 768



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 74/167 (44%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  +  V+S G    G LG G  +  C    +I+  +   V +V      + 
Sbjct: 4140 SGDAQTLCLTDDDMVWSWGDGDYGKLGRG-GSDGCKIPMKIDSLTGLGVTKVECGSQFSV 4198

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4199 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4257

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    + ++A G ++ LA
Sbjct: 4258 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKINRVACGSAHTLA 4303



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 67/137 (48%), Gaps = 3/137 (2%)

Query: 207  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            P   EAL  +   Q+  G      +T  G ++  G    G+LG G T    TP  +  ++
Sbjct: 3964 PTPTEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQ 4023

Query: 267  EVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
             V    V + +G  + LA++  G VYS+G   +  LGHG +    +PR I++ R  G+ V
Sbjct: 4024 HVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLR--GVEV 4081

Query: 326  VRVSAGDEHVVALDSSG 342
            V ++AG  H   + +SG
Sbjct: 4082 VDIAAGGAHSACITASG 4098



 Score = 41.2 bits (95), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 7/113 (6%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3940 GTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPV----QLIGGEQTLFAVTADGKLY 3995

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G V
Sbjct: 3996 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEV 4048


>gi|410900470|ref|XP_003963719.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Takifugu rubripes]
          Length = 1042

 Score = 95.1 bits (235), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 71/228 (31%), Positives = 112/228 (49%), Gaps = 6/228 (2%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           ++ G  HTL +++   +FS G    G LG      +CV   R I   S   + QV+    
Sbjct: 89  VSGGESHTLALNDKGQIFSWGLGSDGQLGLN-NFEECVRVPRNIKCLSDVQIAQVACGYR 147

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  + + GQVF+ G N     G       I  P+++++L+G+P  Q++AG   +  +T+
Sbjct: 148 HSHALSKGGQVFSWGQNQFGQLGLGMHGSSISTPQIIQSLQGIPFAQLSAGGAHSFAITL 207

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V   G N  GQLG  DT DR  P  +  L     V+ ++ G  +  A+T  G V++F
Sbjct: 208 SGAVFGWGRNKFGQLGLNDTNDRWFPALLKSLRS-QRVIYVSCGEDHTAALTKEGGVFTF 266

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           G+G    LGH   + E+ PR +  F   G  V ++S G +H +A   S
Sbjct: 267 GAGGYGQLGHNSTNHEINPRKV--FELMGNIVTQISCGRQHTLAFTPS 312



 Score = 84.3 bits (207), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 111/230 (48%), Gaps = 12/230 (5%)

Query: 119 GRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 177
           G  HT+ L+ + +V++CG +  G LGH     +      ++   A  +V VS  E+H   
Sbjct: 42  GLKHTVFLLDDGTVYTCGCNDLGQLGHEKPRKKPEHVVALD---AQIIVAVSGGESHTLA 98

Query: 178 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
           +   GQ+F+ G  S    G  +    +  PR ++ L  V   QV  G   +  L+  G V
Sbjct: 99  LNDKGQIFSWGLGSDGQLGLNNFEECVRVPRNIKCLSDVQIAQVACGYRHSHALSKGGQV 158

Query: 238 HTCGSNTHGQLG---HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
            + G N  GQLG   HG ++   TP+ I  L+ +    Q++AG ++  A+T +G V+ +G
Sbjct: 159 FSWGQNQFGQLGLGMHGSSIS--TPQIIQSLQGI-PFAQLSAGGAHSFAITLSGAVFGWG 215

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
                 LG  + +D   P  +++ R +   V+ VS G++H  AL   G V
Sbjct: 216 RNKFGQLGLNDTNDRWFPALLKSLRSQ--RVIYVSCGEDHTAALTKEGGV 263



 Score = 72.0 bits (175), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 65/191 (34%), Positives = 91/191 (47%), Gaps = 6/191 (3%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+  G  H+  +S    VFS G +  G LG G   +   +   I         Q+SA   
Sbjct: 141 QVACGYRHSHALSKGGQVFSWGQNQFGQLGLGMHGSSISTPQIIQSLQGIPFAQLSAGGA 200

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  +  SG VF  G N     G  DTN   F P L+++L+      V+ G + T  LT 
Sbjct: 201 HSFAITLSGAVFGWGRNKFGQLGLNDTNDRWF-PALLKSLRSQRVIYVSCGEDHTAALTK 259

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLAVT-GNGVVY 291
            G V T G+  +GQLGH  T     P+ +   E +G++V QI+ G  + LA T  +G +Y
Sbjct: 260 EGGVFTFGAGGYGQLGHNSTNHEINPRKV--FELMGNIVTQISCGRQHTLAFTPSSGKMY 317

Query: 292 SFGSGSNFCLG 302
           SFG G N  LG
Sbjct: 318 SFGLGGNGQLG 328



 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/213 (30%), Positives = 96/213 (45%), Gaps = 9/213 (4%)

Query: 135 GSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R   F     V  V     H  F+L  G V+TCG N   
Sbjct: 5   GNASYGQLGLGGIDEEIVIEPRKCEFFHGKKVCDVGCGLKHTVFLLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 253
             GH    +P  +P  V AL       V+ G + T  L  +G + + G  + GQLG  + 
Sbjct: 65  QLGHE---KPRKKPEHVVALDAQIIVAVSGGESHTLALNDKGQIFSWGLGSDGQLGLNNF 121

Query: 254 LD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ- 311
            +    P++I  L +V  + Q+A G  +  A++  G V+S+G      LG G     +  
Sbjct: 122 EECVRVPRNIKCLSDV-QIAQVACGYRHSHALSKGGQVFSWGQNQFGQLGLGMHGSSIST 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           P+ IQ+   +GI   ++SAG  H  A+  SG V
Sbjct: 181 PQIIQSL--QGIPFAQLSAGGAHSFAITLSGAV 211



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 73/168 (43%), Gaps = 24/168 (14%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPS------AAHVVQ 167
           Q++ G  H+  I+ S +VF  G +  G LG      +        FP+      +  V+ 
Sbjct: 194 QLSAGGAHSFAITLSGAVFGWGRNKFGQLGLNDTNDRW-------FPALLKSLRSQRVIY 246

Query: 168 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
           VS  E+H A + + G VFT G       GH  TN  I  PR V  L G    Q++ G   
Sbjct: 247 VSCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEI-NPRKVFELMGNIVTQISCGRQH 305

Query: 228 T-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI--------APLE 266
           T  F    G +++ G   +GQLG   T +R +P  +        AP+E
Sbjct: 306 TLAFTPSSGKMYSFGLGGNGQLGTRSTCNRKSPAPVKGPFVASAAPIE 353


>gi|402874534|ref|XP_003901090.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Papio
            anubis]
          Length = 3314

 Score = 95.1 bits (235), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 75/237 (31%), Positives = 124/237 (52%), Gaps = 14/237 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 2484 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 2542

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 2543 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 2601

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 2602 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 2658

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             +V++FG G    LG G    +  P+ I      GI + +V+ G +  VAL   G+V
Sbjct: 2659 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL--CGIGIKKVACGTQFSVALTKDGHV 2713



 Score = 84.7 bits (208), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 71/225 (31%), Positives = 110/225 (48%), Gaps = 7/225 (3%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 2546 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTS 2604

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHT 239
             G++FT G+      G  +T+     P  V AL+G    QV  GLN T  ++  G  V  
Sbjct: 2605 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 2663

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ I  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 2664 FGDGDYGKLGLGNSTAKSSPQKIDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 2722

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             L  G   +  +P+ I      G+ +  V+ G EH +AL S+G V
Sbjct: 2723 GLPEGRARNHNRPQQIPVL--AGMIIEDVAVGAEHTLALASNGDV 2765



 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 13/229 (5%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ ++ S+  +F+ G+   G LG G  + + +   R+       + QV+   
Sbjct: 2590 VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 2648

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G +   F  GD      G+         P+ ++ L G+  K+V  G  F+ 
Sbjct: 2649 NHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS---SPQKIDVLCGIGIKKVACGTQFSV 2705

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNG 288
             LT  GHV+T G +    L  G   +   P+ I  L   G +++ +A G  + LA+  NG
Sbjct: 2706 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVL--AGMIIEDVAVGAEHTLALASNG 2763

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             VY++GS S   LG G  +   +P  +     +G +V ++SAG  H  A
Sbjct: 2764 DVYAWGSNSEGQLGLGHTNHVREPTLVTGL--QGKNVRQISAGRCHSAA 2810



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 65/128 (50%), Gaps = 4/128 (3%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 2483 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 2542

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H  
Sbjct: 2543 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 2600

Query: 337  ALDSSGYV 344
             + S G +
Sbjct: 2601 VVTSDGKL 2608



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 92/218 (42%), Gaps = 14/218 (6%)

Query: 115  QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HTL +S   S V++ G    G LG G  T +  S  +I+      + +V+   
Sbjct: 2643 QVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKIDVLCGIGIKKVACGT 2701

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + +  L G+  + V  G   T 
Sbjct: 2702 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQIPVLAGMIIEDVAVGAEHTL 2757

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L   G V+  GSN+ GQLG G T     P  +  L+   +V QI+AG  +  A T   V
Sbjct: 2758 ALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQG-KNVRQISAGRCHSAAWTAPPV 2816

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR 327
                  G +  L  G   D L P+     R   IH VR
Sbjct: 2817 P-PRAPGVSVPLQLG-LPDTLPPQ-YGALREVSIHTVR 2851


>gi|340375548|ref|XP_003386296.1| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Amphimedon
           queenslandica]
          Length = 4694

 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 75/230 (32%), Positives = 107/230 (46%), Gaps = 8/230 (3%)

Query: 118 TGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 177
           +G +   L  +  V+S G    GVLG G   +Q    T +   S   +V +SA   H+A 
Sbjct: 516 SGNHILALTKDGKVYSWGQGSNGVLGIGNTESQTAP-TAVAALSGDRIVHISAGSMHSAA 574

Query: 178 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIRG 235
           V + G ++T G  S    GH +    +  P +VE L GV   QV   +G   T  L   G
Sbjct: 575 VTEDGVLYTWGKGSYGRLGHGNAEDKLI-PTIVEGLNGVKIVQVDCGSGDAHTLALDDTG 633

Query: 236 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
            V + G   +G+LG   +     PK I+ +     VV+I  G    +A+T +G +YS+G 
Sbjct: 634 QVWSWGDGDYGKLGRPGSDQNKVPKPISGIGSTSPVVKIICGNQISMALTKDGKLYSWGC 693

Query: 296 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--DSSGY 343
           G  + LGHG Q    QP+ I+        V  VS G +H VAL  DS  Y
Sbjct: 694 GDTYQLGHGNQEHVRQPKLIEGLSE--TVVSDVSVGAQHCVALTTDSDVY 741



 Score = 74.7 bits (182), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 69/233 (29%), Positives = 104/233 (44%), Gaps = 18/233 (7%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSASENHA 175
            GR+   + ++  VFS G    G LGHG       S+ R   I    A H+ +VS    H+
Sbjct: 3021 GRHVLAVTADGKVFSWGDGQYGQLGHG----SLQSYDRPKMIEIFQAKHIREVSCGTGHS 3076

Query: 176  AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG-LNFTGFLTIR 234
            A V  +G++FT G  +    GH D+N    +P+LV AL+ V    V  G  N        
Sbjct: 3077 AAVSVNGELFTWGQGADGRLGHGDSNNQT-KPKLVRALEKVRISCVACGSRNAHTLAAGD 3135

Query: 235  GHVHTCGSNTHGQLGHGD---TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
              +   G  + G+LG  D   + D P      P     +++QI  G  + + +T  G VY
Sbjct: 3136 NSLWAWGDGSFGKLGLKDGSSSTDVPVQVITFP----SNIIQIECGMHFSVLLTKEGKVY 3191

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            ++G G  + LG+     +  P  +     K I   +V+ G  H +AL SSG V
Sbjct: 3192 TWGKGEYYRLGNDSTSVQPIPTLVDGLASKTI--TQVAVGALHCLALTSSGEV 3242



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/116 (37%), Positives = 68/116 (58%), Gaps = 5/116 (4%)

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           LT  G V++ G  ++G LG G+T  +  P ++A L     +V I+AG  +  AVT +GV+
Sbjct: 523 LTKDGKVYSWGQGSNGVLGIGNTESQTAPTAVAALSG-DRIVHISAGSMHSAAVTEDGVL 581

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVALDSSGYV 344
           Y++G GS   LGHG   D+L P  ++     G+ +V+V   +GD H +ALD +G V
Sbjct: 582 YTWGKGSYGRLGHGNAEDKLIPTIVEGL--NGVKIVQVDCGSGDAHTLALDDTGQV 635



 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/238 (24%), Positives = 104/238 (43%), Gaps = 9/238 (3%)

Query: 113  NMQITTGRYHTL--LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS---AAHVVQ 167
            N  + TG   TL  +  +  V++ G +  G LG G            +  +   A   + 
Sbjct: 3868 NPAMITGGEQTLFAVTDDGKVYASGYAAHGRLGIGSSDNVATPTPLTSLATRGIAVKKIA 3927

Query: 168  VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
            + +   H   V   G+++  G+      G   T   +  P L+E+LK         G + 
Sbjct: 3928 IHSGGKHCLAVTTQGELYAWGEGEDGKLG-LGTTVNMNVPHLIESLKSKHVIDAGCGSSH 3986

Query: 228  TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE-EVGSVVQIAAGPSYMLAVTG 286
            +  +T  G ++T G   +G+LGH D   +  PK ++ L+ E  + V   +G +  L  T 
Sbjct: 3987 SACITDDGSLYTWGKGRYGRLGHNDHETQHKPKLVSALKGEQVTCVACGSGDAQTLCATA 4046

Query: 287  NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            +G V+S+G G    LG G       P+ I +    G HV+++  G +  +AL ++G+V
Sbjct: 4047 SGCVFSWGDGDYGKLGRGGNEGSKVPKKIDSL--TGKHVIKLLCGSQFSMALTTAGHV 4102



 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 61/228 (26%), Positives = 98/228 (42%), Gaps = 13/228 (5%)

Query: 119  GRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-----ASE 172
            G  H+  I++  S+++ G    G LGH    TQ     +    SA    QV+     + +
Sbjct: 3983 GSSHSACITDDGSLYTWGKGRYGRLGHNDHETQ----HKPKLVSALKGEQVTCVACGSGD 4038

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
                    SG VF+ GD      G R  N     P+ +++L G    ++  G  F+  LT
Sbjct: 4039 AQTLCATASGCVFSWGDGDYGKLG-RGGNEGSKVPKKIDSLTGKHVIKLLCGSQFSMALT 4097

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              GHV+T G   + +LGHGD   + TP+ +  L    +V+ I  G  + +  T +G V+S
Sbjct: 4098 TAGHVYTWGKGDYYRLGHGDDSHQRTPRRVLGLLAHENVIDIGCGSLHCIVCTESGKVFS 4157

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            +G      +G+        P+ I       I +  V+ G  H +A  S
Sbjct: 4158 WGDNDEGQIGNDTTQAVSVPKRINI--TDNICIDHVACGSAHSIAWSS 4203



 Score = 60.8 bits (146), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 85/177 (48%), Gaps = 6/177 (3%)

Query: 164  HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT- 222
            H +Q +     +  V   G+VF CG+ SS   G       I  P  + +L     ++V  
Sbjct: 2959 HPIQFAGGSKCSFVVSDDGKVFACGEGSSGRLGIGGFAN-IRMPHQISSLSMYVVRKVAV 3017

Query: 223  --AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
              AG +    +T  G V + G   +GQLGHG       PK I  + +   + +++ G  +
Sbjct: 3018 SCAGRHVLA-VTADGKVFSWGDGQYGQLGHGSLQSYDRPKMIE-IFQAKHIREVSCGTGH 3075

Query: 281  MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
              AV+ NG ++++G G++  LGHG+ +++ +P+ ++   +  I  V   + + H +A
Sbjct: 3076 SAAVSVNGELFTWGQGADGRLGHGDSNNQTKPKLVRALEKVRISCVACGSRNAHTLA 3132



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 82/165 (49%), Gaps = 9/165 (5%)

Query: 122  HTLLISNSSVFSCGSSLCGVLG--HGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
            HTL   ++S+++ G    G LG   G  +T  V    I FPS  +++Q+    + +  + 
Sbjct: 3129 HTLAAGDNSLWAWGDGSFGKLGLKDGSSSTD-VPVQVITFPS--NIIQIECGMHFSVLLT 3185

Query: 180  QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
            + G+V+T G    +  G+  T+ +PI  P LV+ L      QV  G      LT  G V+
Sbjct: 3186 KEGKVYTWGKGEYYRLGNDSTSVQPI--PTLVDGLASKTITQVAVGALHCLALTSSGEVY 3243

Query: 239  TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            + G N HGQ G+  T+    P+ +A L+    + +IA G S+ +A
Sbjct: 3244 SWGDNEHGQQGNNSTICNRKPQIVASLKG-HRICKIACGSSHSIA 3287



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 87/192 (45%), Gaps = 11/192 (5%)

Query: 114 MQITTGRYHTLLISNSSV-FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS--A 170
           + I+ G  H+  ++   V ++ G    G LGHG    + +  T +   +   +VQV   +
Sbjct: 563 VHISAGSMHSAAVTEDGVLYTWGKGSYGRLGHGNAEDKLIP-TIVEGLNGVKIVQVDCGS 621

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGH--RDTNRPIFRPRLVEALKGV-PCKQVTAGLNF 227
            + H   +  +GQV++ GD      G    D N+    P+ +  +    P  ++  G   
Sbjct: 622 GDAHTLALDDTGQVWSWGDGDYGKLGRPGSDQNK---VPKPISGIGSTSPVVKIICGNQI 678

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           +  LT  G +++ G     QLGHG+      PK I  L E   V  ++ G  + +A+T +
Sbjct: 679 SMALTKDGKLYSWGCGDTYQLGHGNQEHVRQPKLIEGLSET-VVSDVSVGAQHCVALTTD 737

Query: 288 GVVYSFGSGSNF 299
             VY++G  S+F
Sbjct: 738 SDVYAWGKNSSF 749



 Score = 51.2 bits (121), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 54/222 (24%), Positives = 93/222 (41%), Gaps = 7/222 (3%)

Query: 127  SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 186
            S  SVF  G +  G LG G E  +  S       S  +   ++  E     V   G+V+ 
Sbjct: 3832 STFSVFGWGHNHRGQLG-GIEGNKVKSPRLCESLSELNPAMITGGEQTLFAVTDDGKVYA 3890

Query: 187  CG--DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGS 242
             G   +     G  D N     P    A +G+  K++   +G      +T +G ++  G 
Sbjct: 3891 SGYAAHGRLGIGSSD-NVATPTPLTSLATRGIAVKKIAIHSGGKHCLAVTTQGELYAWGE 3949

Query: 243  NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
               G+LG G T++   P  I  L+    V+    G S+   +T +G +Y++G G    LG
Sbjct: 3950 GEDGKLGLGTTVNMNVPHLIESLKS-KHVIDAGCGSSHSACITDDGSLYTWGKGRYGRLG 4008

Query: 303  HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            H +   + +P+ +   + + +  V   +GD   +   +SG V
Sbjct: 4009 HNDHETQHKPKLVSALKGEQVTCVACGSGDAQTLCATASGCV 4050


>gi|47214126|emb|CAG01384.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 4628

 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 72/233 (30%), Positives = 111/233 (47%), Gaps = 13/233 (5%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHG-----PETTQCVSFTRINFPSAAHVVQVSASEN 173
           G+++  L SN  VFS G    G LGHG      E T   +F      +  HVV ++    
Sbjct: 467 GQHYLALSSNGEVFSWGCGDGGRLGHGDTTYLEEPTMIAAFN--GKQAGKHVVHIACGST 524

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           ++A +   G+++T G  +    GH  +      P LV ALKG+    V  G      L +
Sbjct: 525 YSAAITVDGELYTWGRGNYGRLGHGSSEDQT-TPMLVTALKGLKVVDVACGSGDAQTLAV 583

Query: 234 --RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
              G V + G   +G+LG G +    TPK +  L+++  +V++  G  + +A+T +G VY
Sbjct: 584 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDL-DIVKVCCGSQFSVALTKDGQVY 642

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           ++G G N  LGHG       P+ + T   +G  VV V+ G  H +AL   G V
Sbjct: 643 TWGKGDNQRLGHGTDEHVRFPKLLDTL--QGKKVVDVAVGSTHCLALTDDGEV 693



 Score = 90.1 bits (222), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 72/237 (30%), Positives = 113/237 (47%), Gaps = 8/237 (3%)

Query: 113  NMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS 171
             + + +G  H L L S   V+S G +  G LGHG   + C     I       VV ++A 
Sbjct: 3846 KVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGVEVVDIAAG 3904

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTG 229
              H+A +  SG++FT G       GH D+   + +P+LV+AL+G     V   +G   T 
Sbjct: 3905 GAHSACITASGELFTWGKGRYGRLGHGDSEDQL-KPKLVDALQGHRVIDVACGSGDAQTL 3963

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             LT    V + G   +G+LG G +    TP  I  L  +G V+++  G  + +A+T +G 
Sbjct: 3964 CLTDDDMVWSWGDGDYGKLGRGGSDGCKTPMKIDSLTGLG-VIKVECGSQFSVALTKSGA 4022

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSL 346
            VY++G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G + +
Sbjct: 4023 VYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGRIKV 4077



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 73/228 (32%), Positives = 107/228 (46%), Gaps = 7/228 (3%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+   L  +  VFS G    G LGH      C     I    A  +  ++   +H+A +
Sbjct: 2827 GRHAMALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKAKRIRDIACGSSHSAAI 2885

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG++++ G       GH D N    RP+LV+ L G    QV  G     T  LT  G 
Sbjct: 2886 TSSGELYSWGLGEYGRLGHGD-NTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGL 2944

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 2945 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3003

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G V
Sbjct: 3004 DYFRLGHGTDVHVRKPQMVEGLR--GKKIVHVAVGALHCLAVTDTGQV 3049



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 66/223 (29%), Positives = 107/223 (47%), Gaps = 18/223 (8%)

Query: 131  VFSCGSSLCGVLGHG------PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
            +++CG +  G LG G      P   Q  + +  N+      V V +   HA  +   G+V
Sbjct: 2784 IYACGEATNGRLGLGLSSGTIPIPRQITALS--NY--VVKKVAVHSGGRHAMALTVDGKV 2839

Query: 185  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
            F+ G+      GH  +     +PRL+EALK    + +  G + +  +T  G +++ G   
Sbjct: 2840 FSWGEGDDGKLGHF-SRMNCDKPRLIEALKAKRIRDIACGSSHSAAITSSGELYSWGLGE 2898

Query: 245  HGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCL 301
            +G+LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    L
Sbjct: 2899 YGRLGHGDNTTQLRPKLVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKL 2956

Query: 302  GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            G G       P+ I+  R  G  V ++  G +  +AL  SG V
Sbjct: 2957 GRGGSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVV 2997



 Score = 74.3 bits (181), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 57/188 (30%), Positives = 93/188 (49%), Gaps = 7/188 (3%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
            SA +VVQV+        V   G+++ CG+ ++   G   ++  I  PR + AL     K+
Sbjct: 2761 SALNVVQVAGGSKSLFAVTVEGKIYACGEATNGRLGLGLSSGTIPIPRQITALSNYVVKK 2820

Query: 221  VT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
            V   +G      LT+ G V + G    G+LGH   ++   P+ I  L +   +  IA G 
Sbjct: 2821 VAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL-KAKRIRDIACGS 2879

Query: 279  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVV 336
            S+  A+T +G +YS+G G    LGHG+   +L+P+ ++     G  V++V+ G  D   +
Sbjct: 2880 SHSAAITSSGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLL--GHRVIQVACGSRDAQTL 2937

Query: 337  ALDSSGYV 344
            AL   G V
Sbjct: 2938 ALTDEGLV 2945



 Score = 68.9 bits (167), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  I++S  ++S G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 2875 IACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQ-LRPKLVKVLLGHRVIQVACGSRD 2933

Query: 175  AAFV--LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A  +     G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 2934 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 2992

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 2993 KSGVVWTWGKGDYFRLGHGTDVHVRKPQMVEGLRG-KKIVHVAVGALHCLAVTDTGQVYA 3051

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3052 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3094



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 88/191 (46%), Gaps = 20/191 (10%)

Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
           S+  V Q+  SE     +  SG V+T    S+              P L+ +L      +
Sbjct: 412 SSLGVTQIVCSEKGFLILSSSGAVYTQNYKST-----------TLAPMLIHSLSSRKMVK 460

Query: 221 VTAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIA 275
           + A  +   +L +   G V + G    G+LGHGDT     P  IA    ++ G  VV IA
Sbjct: 461 LAAHPDGQHYLALSSNGEVFSWGCGDGGRLGHGDTTYLEEPTMIAAFNGKQAGKHVVHIA 520

Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDE 333
            G +Y  A+T +G +Y++G G+   LGHG   D+  P  +     KG+ VV V+  +GD 
Sbjct: 521 CGSTYSAAITVDGELYTWGRGNYGRLGHGSSEDQTTPMLVTAL--KGLKVVDVACGSGDA 578

Query: 334 HVVALDSSGYV 344
             +A+  +G V
Sbjct: 579 QTLAVTENGQV 589



 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 78/162 (48%), Gaps = 5/162 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G ++ CG 
Sbjct: 2731 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKIYACGE 2789

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  + +A+T +G V+S+G G +  
Sbjct: 2790 ATNGRLGLGLSSGTIPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGK 2849

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            LGH  + +  +PR I+  + K I    ++ G  H  A+ SSG
Sbjct: 2850 LGHFSRMNCDKPRLIEALKAKRIR--DIACGSSHSAAITSSG 2889



 Score = 54.7 bits (130), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 48/161 (29%), Positives = 70/161 (43%), Gaps = 3/161 (1%)

Query: 125  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
            L     VFS G    G LG G  +  C     I   +   V Q+      +  + +SG V
Sbjct: 2939 LTDEGLVFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVV 2997

Query: 185  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
            +T G    F  GH  T+  + +P++VE L+G     V  G      +T  G V+  G N 
Sbjct: 2998 WTWGKGDYFRLGH-GTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDND 3056

Query: 245  HGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 3057 HGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 3096



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 61/233 (26%), Positives = 104/233 (44%), Gaps = 23/233 (9%)

Query: 78  VQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQIT-----TGRYHTLLIS-NSSV 131
           V  EL     GN+ R L    S + ++ ++ T+   +++      +G   TL ++ N  V
Sbjct: 531 VDGELYTWGRGNYGR-LGHGSSEDQTTPMLVTALKGLKVVDVACGSGDAQTLAVTENGQV 589

Query: 132 FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNS 191
           +S G    G LG G  +  C +   +       +V+V      +  + + GQV+T G   
Sbjct: 590 WSWGDGDYGKLGRG-GSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGD 648

Query: 192 SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG 251
           +   GH  T+  +  P+L++ L+G     V  G      LT  G VH+ GSN   +L H 
Sbjct: 649 NQRLGH-GTDEHVRFPKLLDTLQGKKVVDVAVGSTHCLALTDDGEVHSWGSND--KLQHF 705

Query: 252 DTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
           DTL  ++  PK++  L     +V I+ GP         G  +++ S S + +G
Sbjct: 706 DTLFSNKKQPKALPGLNS-KHIVGISCGP---------GQSFAWSSCSEWSVG 748



 Score = 48.5 bits (114), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 67/137 (48%), Gaps = 3/137 (2%)

Query: 207  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            P   EAL  +   Q+  G      +T  G ++  G    G+LG G T    TP  +  ++
Sbjct: 3781 PTPTEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQ 3840

Query: 267  EVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
             V    V + +G  + LA++  G VYS+G   +  LGHG +    +PR I++ R  G+ V
Sbjct: 3841 HVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLR--GVEV 3898

Query: 326  VRVSAGDEHVVALDSSG 342
            V ++AG  H   + +SG
Sbjct: 3899 VDIAAGGAHSACITASG 3915



 Score = 41.2 bits (95), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 7/113 (6%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3757 GTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPV----QLIGGEQTLFAVTADGKLY 3812

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G V
Sbjct: 3813 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEV 3865


>gi|345494372|ref|XP_001602409.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Nasonia
           vitripennis]
          Length = 1083

 Score = 94.7 bits (234), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 69/224 (30%), Positives = 113/224 (50%), Gaps = 9/224 (4%)

Query: 124 LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAFVLQSG 182
           L+ ++++++  GS++ G LG G    + +   R ++F  A  V Q++  E H   + + G
Sbjct: 21  LIPNDNNMYCWGSTVYGELGLGGIEDENILMPRELDFQKATAVEQIACGETHTVLITKDG 80

Query: 183 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
           +VF+CG+N S   GH    +P  R +++  L     KQ   G + +  +   G +   GS
Sbjct: 81  EVFSCGNNDSGQLGHE---KPTKRLQMIPGLDAFIFKQAACGASHSVAVNNWGQLFCWGS 137

Query: 243 NTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 301
           N  GQLG G  L    TP+ +  L     VVQIA G  + LA+T NG +Y++GS S+  L
Sbjct: 138 NADGQLGLGTPLTIAHTPRMVKAL-GTSIVVQIACGKKHTLALTNNGELYAWGSNSDGQL 196

Query: 302 GHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G G+    E +P+ I       I +  ++ G  H + +  SG V
Sbjct: 197 GLGQDVKIETRPKLITGL--ATIPIAFIACGGYHSIVVSKSGAV 238



 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/183 (33%), Positives = 94/183 (51%), Gaps = 6/183 (3%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QI  G+ HTL L +N  +++ GS+  G LG G +         I   +   +  ++   
Sbjct: 167 VQIACGKKHTLALTNNGELYAWGSNSDGQLGLGQDVKIETRPKLITGLATIPIAFIACGG 226

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  V +SG VF  G N+    G  D +   + P L++ L+    K V  G  F+ FLT
Sbjct: 227 YHSIVVSKSGAVFGWGRNTFGQLGMNDISDK-YVPCLLKTLRNAKVKYVACGEEFSVFLT 285

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
           + G V TCG+  +GQLGHG   +   P+ I  +E +GSVV QI+ G  + LA V   G V
Sbjct: 286 MDGGVFTCGAGMYGQLGHGANSNEILPRQI--IELMGSVVTQISCGKRHTLALVPSRGKV 343

Query: 291 YSF 293
           Y++
Sbjct: 344 YAW 346


>gi|432863737|ref|XP_004070157.1| PREDICTED: E3 ISG15--protein ligase HERC5-like [Oryzias latipes]
          Length = 892

 Score = 94.7 bits (234), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 61/180 (33%), Positives = 90/180 (50%), Gaps = 3/180 (1%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V QV+    H   + + GQV+T G NS    G       I  P+ V +L G+P  QV+AG
Sbjct: 119 VSQVACGSRHTVALTKEGQVYTWGQNSRGQLGLGKKGCSISSPQCVRSLSGMPLVQVSAG 178

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
            + +  L++ G V   G N  GQLG GD+ DR TP S+  L  +     I+ G  +   +
Sbjct: 179 GDHSFALSVSGSVFGWGRNDCGQLGLGDSQDRCTPTSVDSL-NLKKTTSISCGKDHTAIL 237

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           T +G V++FGSG    LGH    +EL+PR +      G  V R++ G  H + L  +  +
Sbjct: 238 TKHGTVFTFGSGQFGQLGHNSSRNELRPRLVAELW--GAKVTRIACGRYHTLVLQENNKI 295



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/212 (28%), Positives = 95/212 (44%), Gaps = 28/212 (13%)

Query: 152 VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT----------CGDNSSFCCGHR--- 198
           ++F + N    A V++ S  EN A   ++  Q F           CGD+       +   
Sbjct: 41  LAFAKTN--GNAFVMRTSDGENGAR--MRGKQKFVKCKEKIEAVGCGDDEVILLSEKGSV 96

Query: 199 ---DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT-L 254
              D  + ++ PR++EA   +P  QV  G   T  LT  G V+T G N+ GQLG G    
Sbjct: 97  YRVDVTQALYLPRMLEAFCRIPVSQVACGSRHTVALTKEGQVYTWGQNSRGQLGLGKKGC 156

Query: 255 DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQP 312
              +P+ +  L  +  +VQ++AG  +  A++ +G V  FG G N C  LG G+  D   P
Sbjct: 157 SISSPQCVRSLSGM-PLVQVSAGGDHSFALSVSGSV--FGWGRNDCGQLGLGDSQDRCTP 213

Query: 313 RAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            ++ +   K      +S G +H   L   G V
Sbjct: 214 TSVDSLNLK--KTTSISCGKDHTAILTKHGTV 243



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 84/190 (44%), Gaps = 3/190 (1%)

Query: 115 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+  G  HT+ L     V++ G +  G LG G +     S   +   S   +VQVSA  +
Sbjct: 121 QVACGSRHTVALTKEGQVYTWGQNSRGQLGLGKKGCSISSPQCVRSLSGMPLVQVSAGGD 180

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  +  SG VF  G N     G  D+      P  V++L       ++ G + T  LT 
Sbjct: 181 HSFALSVSGSVFGWGRNDCGQLGLGDSQDRC-TPTSVDSLNLKKTTSISCGKDHTAILTK 239

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V T GS   GQLGH  + +   P+ +A L     V +IA G  + L +  N  +YSF
Sbjct: 240 HGTVFTFGSGQFGQLGHNSSRNELRPRLVAELWG-AKVTRIACGRYHTLVLQENNKIYSF 298

Query: 294 GSGSNFCLGH 303
           G      LG 
Sbjct: 299 GCNDQNQLGR 308



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 66/140 (47%), Gaps = 3/140 (2%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++ G  H+  +S S SVF  G + CG LG G    +C   T ++  +      +S  +
Sbjct: 173 VQVSAGGDHSFALSVSGSVFGWGRNDCGQLGLGDSQDRCTP-TSVDSLNLKKTTSISCGK 231

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           +H A + + G VFT G       GH +++R   RPRLV  L G    ++  G   T  L 
Sbjct: 232 DHTAILTKHGTVFTFGSGQFGQLGH-NSSRNELRPRLVAELWGAKVTRIACGRYHTLVLQ 290

Query: 233 IRGHVHTCGSNTHGQLGHGD 252
               +++ G N   QLG  +
Sbjct: 291 ENNKIYSFGCNDQNQLGRSN 310


>gi|340711630|ref|XP_003394376.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase
            HERC2-like [Bombus terrestris]
          Length = 5151

 Score = 94.7 bits (234), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 78/238 (32%), Positives = 114/238 (47%), Gaps = 14/238 (5%)

Query: 113  NMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQV 168
             M + +G  H L L  +  +FS G    G LGHG      VS  +   I    +  +  +
Sbjct: 3348 KMAVHSGGKHALALTQDGKIFSWGEGEDGKLGHG----NSVSLDKPRLIESLKSKRIRDI 3403

Query: 169  SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF- 227
            +    H+A +  SG+++T G       GH DT   + +P+LV++L G    QV  G    
Sbjct: 3404 ACGSGHSAAITSSGELYTWGLGEYGRLGHGDTATQM-KPKLVQSLVGQRVIQVACGSRDA 3462

Query: 228  -TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
             T  LT  G V++ G    G+LG G +    TP  I  L  +G VVQI  G  + LA+T 
Sbjct: 3463 QTMALTADGSVYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLG-VVQIECGAQFSLALTK 3521

Query: 287  NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             G V+++G G  F LGHG  H   +P  ++  R  G  VV V+ G  H +A+  +G V
Sbjct: 3522 YGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLR--GKKVVHVAVGALHCLAVTDTGQV 3577



 Score = 87.4 bits (215), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 68/220 (30%), Positives = 109/220 (49%), Gaps = 11/220 (5%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV--VQVSASENHAAFVLQSGQVFTC 187
             +++CG    G LG G ++  C     I F S   +  + V +   HA  + Q G++F+ 
Sbjct: 3312 KLYACGEGTNGRLGLGDDSNVC-EPKLIPFLSQYMIKKMAVHSGGKHALALTQDGKIFSW 3370

Query: 188  GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
            G+      GH ++   + +PRL+E+LK    + +  G   +  +T  G ++T G   +G+
Sbjct: 3371 GEGEDGKLGHGNSVS-LDKPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGR 3429

Query: 248  LGHGDTLDRPTPKSIAPLEEVGS-VVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGHG 304
            LGHGDT  +  PK +  L  VG  V+Q+A G   +  +A+T +G VYS+G G    LG G
Sbjct: 3430 LGHGDTATQMKPKLVQSL--VGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRG 3487

Query: 305  EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
                   P  I   R  G+ VV++  G +  +AL   G V
Sbjct: 3488 GSDGCYTPLLID--RLNGLGVVQIECGAQFSLALTKYGEV 3525



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 113/236 (47%), Gaps = 17/236 (7%)

Query: 118  TGRYHTLL--ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV----VQVSAS 171
            TG   TLL   ++  V++ G    G LG G   +  V        S  HV    V V++ 
Sbjct: 4331 TGGEQTLLAVTADGKVYATGYGAAGRLGIGGTDSVMVPTL---LESIQHVFVKKVAVNSG 4387

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFTGF 230
              H   +   G V++ G+      GH   NR ++ RP+L+E L G     +  G + +  
Sbjct: 4388 GKHCLALSSEGHVYSWGEGDDGKLGH--GNRLMYDRPKLIEELLGTEIVDIACGGHHSAA 4445

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLAVTGNG 288
            +T  G ++T G   +G+LGHGD+ D+ TPK +  L++   V+ +A  +G +  L VT + 
Sbjct: 4446 ITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLVEALQDY-KVIDVACGSGDAQTLCVTDDD 4504

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             V+S+G G    LG G       P  I++    G+ V++V  G +  VAL  SG +
Sbjct: 4505 NVWSWGDGDYGKLGRGGSDGCKIPMKIESL--AGLGVIKVECGSQFSVALTRSGAI 4558



 Score = 77.4 bits (189), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 65/237 (27%), Positives = 111/237 (46%), Gaps = 21/237 (8%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 169
           + G ++  L  +SSV+S G+   G LGHG       P+  + +    I F        ++
Sbjct: 512 SDGTHYLALTQDSSVYSWGNGDGGRLGHGDRVWYDEPKLVEALVDKNITF--------IA 563

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNF 227
               ++A +  +G+++T G  +    GH +++  +  P LV AL G     V   +G + 
Sbjct: 564 CGSTYSAVLSSNGELYTWGRGNYGRLGHGNSDN-VLIPTLVTALNGHMVVHVACGSGDSQ 622

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           T  +T  G V + G   +G+LG G      TPK +  L ++ +V ++  G  +  A+T  
Sbjct: 623 TLCVTASGIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDI-NVAKVYCGGQFSAALTAY 681

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G VY++G G  + LGHG +     P+ I+    K   V  +  G+ HV+AL     V
Sbjct: 682 GEVYTWGKGEGYRLGHGNEEHIRYPKVIEVLXTK--KVKELCVGNFHVLALTEDQLV 736



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 67/255 (26%), Positives = 114/255 (44%), Gaps = 20/255 (7%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSF 154
             L+S++H           + + +G  H L +S+   V+S G    G LGHG      + +
Sbjct: 4370 LLESIQH------VFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNR----LMY 4419

Query: 155  TR---INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE 211
             R   I       +V ++   +H+A +  +G ++T G       GH D+   +  P+LVE
Sbjct: 4420 DRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQL-TPKLVE 4478

Query: 212  ALKGVPCKQVTAGLNFTGFL--TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 269
            AL+      V  G      L  T   +V + G   +G+LG G +     P  I  L  +G
Sbjct: 4479 ALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLG 4538

Query: 270  SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
             V+++  G  + +A+T +G +Y++G G    LGHG      +PR +     +G  ++ ++
Sbjct: 4539 -VIKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGTDDHVRRPRKVAAL--QGKKIISIA 4595

Query: 330  AGDEHVVALDSSGYV 344
             G  H VA    G V
Sbjct: 4596 TGSLHCVACTDKGEV 4610



 Score = 64.7 bits (156), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 63/226 (27%), Positives = 98/226 (43%), Gaps = 8/226 (3%)

Query: 115  QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS--AS 171
             I  G  H+  I++S  +++ G    G LGHG   TQ +    +       V+QV+  + 
Sbjct: 3402 DIACGSGHSAAITSSGELYTWGLGEYGRLGHGDTATQ-MKPKLVQSLVGQRVIQVACGSR 3460

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
            +     +   G V++ GD      G R  +   + P L++ L G+   Q+  G  F+  L
Sbjct: 3461 DAQTMALTADGSVYSWGDGDFGKLG-RGGSDGCYTPLLIDRLNGLGVVQIECGAQFSLAL 3519

Query: 232  TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            T  G V T G   + +LGHG+      P  +  L     VV +A G  + LAVT  G VY
Sbjct: 3520 TKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRG-KKVVHVAVGALHCLAVTDTGQVY 3578

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            ++G   +   G+G      +P  +         V RVS G  H +A
Sbjct: 3579 AWGDNDHGQQGNGSTIVNKKPSLVHEL--DDARVNRVSCGSSHSIA 3622



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/227 (25%), Positives = 100/227 (44%), Gaps = 8/227 (3%)

Query: 114  MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            + I  G +H+  I+++  +++ G    G LGHG    Q ++   +       V+ V+   
Sbjct: 4434 VDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQ-LTPKLVEALQDYKVIDVACGS 4492

Query: 173  NHAAF--VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
              A    V     V++ GD      G R  +     P  +E+L G+   +V  G  F+  
Sbjct: 4493 GDAQTLCVTDDDNVWSWGDGDYGKLG-RGGSDGCKIPMKIESLAGLGVIKVECGSQFSVA 4551

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            LT  G ++T G   + +LGHG       P+ +A L+    ++ IA G  + +A T  G V
Sbjct: 4552 LTRSGAIYTWGKGDYHRLGHGTDDHVRRPRKVAALQG-KKIISIATGSLHCVACTDKGEV 4610

Query: 291  YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +++G      LG G      +PR +     +G  + RV+ G  H +A
Sbjct: 4611 FTWGDNDEGQLGDGTTSALQRPRLVHAL--QGKKITRVACGSAHTLA 4655



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 69/140 (49%), Gaps = 3/140 (2%)

Query: 204  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
            I  P   E L  +    +  G      ++  G ++ CG  T+G+LG GD  +   PK I 
Sbjct: 3280 IKLPVYSEVLSKLKPIHIAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDSNVCEPKLIP 3339

Query: 264  PLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
             L + +   + + +G  + LA+T +G ++S+G G +  LGHG      +PR I++ + K 
Sbjct: 3340 FLSQYMIKKMAVHSGGKHALALTQDGKIFSWGEGEDGKLGHGNSVSLDKPRLIESLKSKR 3399

Query: 323  IHVVRVSAGDEHVVALDSSG 342
            I    ++ G  H  A+ SSG
Sbjct: 3400 IR--DIACGSGHSAAITSSG 3417



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 68/139 (48%), Gaps = 3/139 (2%)

Query: 207  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            P L E+L  +   Q+T G      +T  G V+  G    G+LG G T     P  +  ++
Sbjct: 4316 PVLCESLSALRPVQLTGGEQTLLAVTADGKVYATGYGAAGRLGIGGTDSVMVPTLLESIQ 4375

Query: 267  EV-GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
             V    V + +G  + LA++  G VYS+G G +  LGHG +    +P+ I+     G  +
Sbjct: 4376 HVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLMYDRPKLIEELL--GTEI 4433

Query: 326  VRVSAGDEHVVALDSSGYV 344
            V ++ G  H  A+ S+G++
Sbjct: 4434 VDIACGGHHSAAITSAGWL 4452



 Score = 41.6 bits (96), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 30/110 (27%), Positives = 51/110 (46%), Gaps = 5/110 (4%)

Query: 237  VHTCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
            V+  G N   QLG   G  +  P    +  L ++  +  IA G   +  V+  G +Y+ G
Sbjct: 3261 VYVWGLNDKDQLGGLKGSKIKLPVYSEV--LSKLKPI-HIAGGSKTLFVVSQEGKLYACG 3317

Query: 295  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             G+N  LG G+  +  +P+ I    +  I  + V +G +H +AL   G +
Sbjct: 3318 EGTNGRLGLGDDSNVCEPKLIPFLSQYMIKKMAVHSGGKHALALTQDGKI 3367


>gi|229442455|gb|AAI72910.1| guanine nucleotide exchange factor p532 [synthetic construct]
          Length = 2441

 Score = 94.7 bits (234), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 75/237 (31%), Positives = 124/237 (52%), Gaps = 14/237 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 1611 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 1669

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 1670 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 1728

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 1729 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 1785

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             +V++FG G    LG G    +  P+ I      GI + +V+ G +  VAL   G+V
Sbjct: 1786 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL--CGIGIKKVACGTQFSVALTKDGHV 1840



 Score = 85.1 bits (209), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 71/225 (31%), Positives = 110/225 (48%), Gaps = 7/225 (3%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 1673 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTS 1731

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHT 239
             G++FT G+      G  +T+     P  V AL+G    QV  GLN T  ++  G  V  
Sbjct: 1732 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 1790

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ I  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 1791 FGDGDYGKLGLGNSTAKSSPQKIDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 1849

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             L  G   +  +P+ I      G+ +  V+ G EH +AL S+G V
Sbjct: 1850 GLPEGRARNHNRPQQIPVL--AGVIIEDVAVGAEHTLALASNGDV 1892



 Score = 64.7 bits (156), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 13/229 (5%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ ++ S+  +F+ G+   G LG G  + + +   R+       + QV+   
Sbjct: 1717 VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 1775

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G +   F  GD      G+         P+ ++ L G+  K+V  G  F+ 
Sbjct: 1776 NHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS---SPQKIDVLCGIGIKKVACGTQFSV 1832

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNG 288
             LT  GHV+T G +    L  G   +   P+ I  L   G +++ +A G  + LA+  NG
Sbjct: 1833 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVL--AGVIIEDVAVGAEHTLALASNG 1890

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             VY++GS S   LG G  +   +P  +     +G +V ++SAG  H  A
Sbjct: 1891 DVYAWGSNSEGQLGLGHTNHVREPTLVTGL--QGKNVRQISAGRCHSAA 1937



 Score = 57.8 bits (138), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 65/128 (50%), Gaps = 4/128 (3%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 1610 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 1669

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H  
Sbjct: 1670 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 1727

Query: 337  ALDSSGYV 344
             + S G +
Sbjct: 1728 VVTSDGKL 1735



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 53/180 (29%), Positives = 79/180 (43%), Gaps = 11/180 (6%)

Query: 115  QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HTL +S   S V++ G    G LG G  T +  S  +I+      + +V+   
Sbjct: 1770 QVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKIDVLCGIGIKKVACGT 1828

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + +  L GV  + V  G   T 
Sbjct: 1829 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQIPVLAGVIIEDVAVGAEHTL 1884

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L   G V+  GSN+ GQLG G T     P  +  L+   +V QI+AG  +  A T   V
Sbjct: 1885 ALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQG-KNVRQISAGRCHSAAWTAPPV 1943


>gi|345795045|ref|XP_544717.3| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC1 isoform 1 [Canis lupus familiaris]
          Length = 4861

 Score = 94.4 bits (233), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 124/237 (52%), Gaps = 14/237 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4089

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4090 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4148

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4149 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4205

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+V
Sbjct: 4206 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHV 4260



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 70/225 (31%), Positives = 110/225 (48%), Gaps = 7/225 (3%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 4093 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTS 4151

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHT 239
             G++FT G+      G  +T+     P  V AL+G    QV  GLN T  ++  G  V  
Sbjct: 4152 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 4210

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ +  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 4211 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 4269

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             L  G   +  +P+ I      G+ +  V+ G EH +AL S+G V
Sbjct: 4270 GLPEGRARNHNRPQQIPVL--AGVVIEDVAVGAEHTLALASTGDV 4312



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 108/234 (46%), Gaps = 38/234 (16%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS----AAHVVQVSASENHA 175
           R+   +  +  +++ G    G LGHG   ++       N P+     ++V +VS   +H 
Sbjct: 521 RHSAAVTEDGELYTWGEGDFGRLGHGDSNSR-------NIPTLVKDISNVGEVSCGSSHT 573

Query: 176 AFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             + + G+    F  GDN     GH DTNR +++P++VEAL+G+  ++V AG   +  LT
Sbjct: 574 IALSKDGRTVWSFGGGDNGKL--GHGDTNR-VYKPKVVEALQGMFIRKVCAGSQSSLALT 630

Query: 233 IRGHVHT--------CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             G V+         CGS+    L          PK I  L     +V I+ G S  LA+
Sbjct: 631 STGQVYAWGCGACLGCGSSEATAL---------RPKLIEELAAT-RIVDISIGDSXCLAL 680

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             +  VY++G+ S    G G     + +P+ +      GI + ++SAG  H +A
Sbjct: 681 RHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGL--DGIAIQQISAGTSHSLA 732



 Score = 64.3 bits (155), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 104/229 (45%), Gaps = 13/229 (5%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ ++ S+  +F+ G+   G LG G  + + +   R+       + QV+   
Sbjct: 4137 VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 4195

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G +   F  GD      G+         P+ V+ L G+  K+V  G  F+ 
Sbjct: 4196 NHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS---SPQKVDVLCGIGIKKVACGTQFSV 4252

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNG 288
             LT  GHV+T G +    L  G   +   P+ I  L   G V++ +A G  + LA+   G
Sbjct: 4253 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVL--AGVVIEDVAVGAEHTLALASTG 4310

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             VY++GS S   LG G  +   +P  +   + K I   ++SAG  H  A
Sbjct: 4311 DVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIR--QISAGRCHSAA 4357



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 70/254 (27%), Positives = 108/254 (42%), Gaps = 20/254 (7%)

Query: 96  FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
           F +    +SD   T A    I TG    ++     V+  GS+    L  G +        
Sbjct: 340 FEEVCRMASDYSRTCASPDSIQTGDA-PIVSETCEVYVWGSNSSHQLVEGTQEKILQPKM 398

Query: 156 RINFPSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTN------RPIFRPR 208
            ++F  A    Q   +  +  FV+ + G V  CG  S    G  D+N      +  F P 
Sbjct: 399 ALSFSDA----QTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH 454

Query: 209 LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 268
              ++K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    + 
Sbjct: 455 --RSIKKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQG 510

Query: 269 GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 328
             VV ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  V
Sbjct: 511 KVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEV 566

Query: 329 SAGDEHVVALDSSG 342
           S G  H +AL   G
Sbjct: 567 SCGSSHTIALSKDG 580



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 65/128 (50%), Gaps = 4/128 (3%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 4030 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4089

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H  
Sbjct: 4090 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 4147

Query: 337  ALDSSGYV 344
             + S G +
Sbjct: 4148 VVTSDGKL 4155



 Score = 48.1 bits (113), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 79/180 (43%), Gaps = 11/180 (6%)

Query: 115  QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HTL +S   S V++ G    G LG G  T +  S  +++      + +V+   
Sbjct: 4190 QVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKVDVLCGIGIKKVACGT 4248

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + +  L GV  + V  G   T 
Sbjct: 4249 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQIPVLAGVVIEDVAVGAEHTL 4304

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L   G V+  GSN+ GQLG G T     P  +  L+   ++ QI+AG  +  A T   V
Sbjct: 4305 ALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQG-KNIRQISAGRCHSAAWTAPPV 4363


>gi|344284757|ref|XP_003414131.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Loxodonta
           africana]
          Length = 1050

 Score = 94.4 bits (233), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 77/234 (32%), Positives = 114/234 (48%), Gaps = 7/234 (2%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  VHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G NS    G          P+ V +L+G+P  QVTAG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVTAGGAHSFAL 205

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T NG V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKNGGVF 264

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYV 344
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLI 316



 Score = 90.1 bits (222), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 108/225 (48%), Gaps = 7/225 (3%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H+V V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIVHVACGESHSLAL 99

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 239 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G     + +P+ +  LE +  + Q+ AG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVTAGGAHSFALSLSGAVFGWGMNN 218

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
              LG  ++ D   P  ++  R +   VV +S G+EH   L  +G
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKNG 261



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 58/189 (30%), Positives = 101/189 (53%), Gaps = 10/189 (5%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N    +P  + AL    
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN----KPEQIGALADQH 85

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVTAGGAHS 202

Query: 336 VALDSSGYV 344
            AL  SG V
Sbjct: 203 FALSLSGAV 211



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 64/194 (32%), Positives = 95/194 (48%), Gaps = 6/194 (3%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++ G +H L L ++   F+ G +  G LG G E     S  R+       + QV+A  
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVTAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG VF  G N++   G  D  +    P  V+ L+      ++ G   T  LT
Sbjct: 200 AHSFALSLSGAVFGWGMNNAGQLGLSD-EKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGNGVV 290
             G V T G+ + GQLGH    D   P+ +  LE +GS V QIA G  + LA V  +G++
Sbjct: 259 KNGGVFTFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLI 316

Query: 291 YSFGSGSNFCLGHG 304
           Y+FG G+   LG G
Sbjct: 317 YAFGCGARGQLGTG 330



 Score = 71.6 bits (174), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 51/165 (30%), Positives = 83/165 (50%), Gaps = 25/165 (15%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           T GQLGH    ++P        E++G+     +V +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 299 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADG 156


>gi|410918052|ref|XP_003972500.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC3-like [Takifugu rubripes]
          Length = 1031

 Score = 94.4 bits (233), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 72/228 (31%), Positives = 110/228 (48%), Gaps = 6/228 (2%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH-VVQVSASEN 173
           ++ G+ H+L ++    VF+ G+   G LG G  T   V   R+      H + QV     
Sbjct: 88  VSCGQAHSLAVNEQGQVFAWGAGEEGQLGLG-TTETAVRIPRLIKRLCDHRIAQVMCGNQ 146

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H   + + GQ+FT G N+S   G          P+ +++L G+P  ++TAG + +  L++
Sbjct: 147 HCIALSKDGQLFTWGQNTSGQLGLGKGEPSKLFPQPLKSLAGIPLAKITAGGDHSFALSL 206

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V   G N  GQLG  D  DR  P  I  L     VV I+ G  +  A+T +G +++F
Sbjct: 207 SGAVFGWGKNKAGQLGLNDIQDRAVPCHIKFLRS-QKVVHISCGEEHTAALTKDGGLFTF 265

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           G GS   LGHG   +EL PR +      G  V +++ G  H +A   S
Sbjct: 266 GDGSWGQLGHGSTANELLPRRV--LELMGTEVSQITCGRHHTLAFAPS 311



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 74/244 (30%), Positives = 108/244 (44%), Gaps = 20/244 (8%)

Query: 107 VETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHG-----PETTQCVSFTRINFP 160
           V T  G  +I  G  H++ L+ + SV++CGS+ CG LGH      PE    +   +I   
Sbjct: 29  VFTGRGLKEIVCGGQHSVFLLHDGSVYTCGSNSCGQLGHNKPGITPEFVGALDTQKITL- 87

Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
                  VS  + H+  V + GQVF  G       G   T   +  PRL++ L      Q
Sbjct: 88  -------VSCGQAHSLAVNEQGQVFAWGAGEEGQLGLGTTETAVRIPRLIKRLCDHRIAQ 140

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV--VQIAAGP 278
           V  G      L+  G + T G NT GQLG G     P+     PL+ +  +   +I AG 
Sbjct: 141 VMCGNQHCIALSKDGQLFTWGQNTSGQLGLGK--GEPSKLFPQPLKSLAGIPLAKITAGG 198

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            +  A++ +G V+ +G      LG  +  D   P  I+  R +   VV +S G+EH  AL
Sbjct: 199 DHSFALSLSGAVFGWGKNKAGQLGLNDIQDRAVPCHIKFLRSQ--KVVHISCGEEHTAAL 256

Query: 339 DSSG 342
              G
Sbjct: 257 TKDG 260



 Score = 71.2 bits (173), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 59/212 (27%), Positives = 100/212 (47%), Gaps = 8/212 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFC 194
           G +  G LG G E          N  +   + ++     H+ F+L  G V+TCG NS   
Sbjct: 5   GKAKDGQLGIGVERNPMFEPRNCNVFTGRGLKEIVCGGQHSVFLLHDGSVYTCGSNS--- 61

Query: 195 CGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTL 254
           CG    N+P   P  V AL       V+ G   +  +  +G V   G+   GQLG G T 
Sbjct: 62  CGQLGHNKPGITPEFVGALDTQKITLVSCGQAHSLAVNEQGQVFAWGAGEEGQLGLGTTE 121

Query: 255 DR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQP 312
                P+ I  L +   + Q+  G  + +A++ +G ++++G  ++  LG G+ +  +L P
Sbjct: 122 TAVRIPRLIKRLCD-HRIAQVMCGNQHCIALSKDGQLFTWGQNTSGQLGLGKGEPSKLFP 180

Query: 313 RAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           + +++    GI + +++AG +H  AL  SG V
Sbjct: 181 QPLKSL--AGIPLAKITAGGDHSFALSLSGAV 210



 Score = 64.3 bits (155), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 66/234 (28%), Positives = 110/234 (47%), Gaps = 11/234 (4%)

Query: 115 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+  G  H + +S +  +F+ G +  G LG G      +    +   +   + +++A  +
Sbjct: 140 QVMCGNQHCIALSKDGQLFTWGQNTSGQLGLGKGEPSKLFPQPLKSLAGIPLAKITAGGD 199

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           H+  +  SG VF  G N +   G  D  +R +  P  ++ L+      ++ G   T  LT
Sbjct: 200 HSFALSLSGAVFGWGKNKAGQLGLNDIQDRAV--PCHIKFLRSQKVVHISCGEEHTAALT 257

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLAVT-GNGVV 290
             G + T G  + GQLGHG T +   P+ +  LE +G+ V QI  G  + LA    +G V
Sbjct: 258 KDGGLFTFGDGSWGQLGHGSTANELLPRRV--LELMGTEVSQITCGRHHTLAFAPSSGGV 315

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQT-FRRKGIH--VVRVSAGDEHVVALDSS 341
           Y+FG  S+  LG G    +  P  ++T F    IH  V +++ G +H   L S+
Sbjct: 316 YAFGCNSHGQLGTGVLSADKSPYPLKTSFLSGSIHGTVTKITCGGDHSFLLYSN 369


>gi|449685467|ref|XP_002154638.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like, partial
           [Hydra magnipapillata]
          Length = 1679

 Score = 94.4 bits (233), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 70/260 (26%), Positives = 130/260 (50%), Gaps = 22/260 (8%)

Query: 98  QSVEHSSDIVETSAGN------MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETT- 149
           Q VE + D + T   N      +Q+  G+Y T  L  + S+ +CG    G LG G  ++ 
Sbjct: 349 QLVEGNKDKILTPKKNDAFKNAIQLEAGQYCTFALFDDGSLHACGKGSHGKLGLGDSSSK 408

Query: 150 QCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRL 209
           QC+    +   +   +     S++H   + ++G V++ GD      GH +    +   +L
Sbjct: 409 QCLHKLNLFNQNIDQISSSKGSDSHTLALTKNGVVYSWGDGEFGKLGHGN----VATQKL 464

Query: 210 VEALKGVPCKQV----TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 265
            + ++GV   Q+    +AG   +  +T  G ++T G   HG+LGHGD+  +  P  +   
Sbjct: 465 PKVIRGVFKNQIITFISAGSRHSAAITKDGDLYTWGEGEHGRLGHGDSSIQRVPTLV--- 521

Query: 266 EEVGSVVQIAAGPSYMLAVTGNGV-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
             + +  Q+AAG S+ + ++ + + V++FG+G N  LGHG    E  P+ +     KGI 
Sbjct: 522 RSIDAASQVAAGCSHTVVLSKDEMTVWTFGAGDNGKLGHGNTKMEYYPKIVDAL--KGIR 579

Query: 325 VVRVSAGDEHVVALDSSGYV 344
           + +++AG +  +AL  +G++
Sbjct: 580 IKKIAAGTQCSIALTWTGFI 599



 Score = 89.0 bits (219), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 91/308 (29%), Positives = 142/308 (46%), Gaps = 35/308 (11%)

Query: 48  LYPQK---FRSLVDLAASQLC--------ALHSIYAGMSRNVQIELLNRCNGNWKRVLRF 96
           L P+K   F++ + L A Q C        +LH+   G         L   + + K+ L  
Sbjct: 359 LTPKKNDAFKNAIQLEAGQYCTFALFDDGSLHACGKGSHGK-----LGLGDSSSKQCLHK 413

Query: 97  LQSVEHSSDIVETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
           L     + D + +S G+        HTL L  N  V+S G    G LGHG   TQ +   
Sbjct: 414 LNLFNQNIDQISSSKGSDS------HTLALTKNGVVYSWGDGEFGKLGHGNVATQKLPKV 467

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR-PRLVEALK 214
                    +  +SA   H+A + + G ++T G+      GH D++  I R P LV ++ 
Sbjct: 468 IRGVFKNQIITFISAGSRHSAAITKDGDLYTWGEGEHGRLGHGDSS--IQRVPTLVRSID 525

Query: 215 GVPCKQVTAGLNFTGFLTI-RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                QV AG + T  L+     V T G+  +G+LGHG+T     PK +  L+ +  + +
Sbjct: 526 AA--SQVAAGCSHTVVLSKDEMTVWTFGAGDNGKLGHGNTKMEYYPKIVDALKGI-RIKK 582

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD-ELQPRAIQTFRRKGIHVVRVSAGD 332
           IAAG    +A+T  G +Y +G G   CLG G      L P+ +++ R   +H+V +S GD
Sbjct: 583 IAAGTQCSIALTWTGFIYVWGCGP--CLGVGAADAVHLLPKIVESLR--DVHIVDISLGD 638

Query: 333 EHVVALDS 340
            H +AL +
Sbjct: 639 CHCLALSA 646



 Score = 63.5 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 64/229 (27%), Positives = 108/229 (47%), Gaps = 19/229 (8%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I+ G  H+  I+ +  +++ G    G LGHG  + Q V     +  +A+   QV+A  +H
Sbjct: 480 ISAGSRHSAAITKDGDLYTWGEGEHGRLGHGDSSIQRVPTLVRSIDAAS---QVAAGCSH 536

Query: 175 AAFVLQSGQV----FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
              VL   ++    F  GDN     GH +T    + P++V+ALKG+  K++ AG   +  
Sbjct: 537 TV-VLSKDEMTVWTFGAGDNGKL--GHGNTKMEYY-PKIVDALKGIRIKKIAAGTQCSIA 592

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           LT  G ++  G      +G  D +    PK +  L +V  +V I+ G  + LA++ +  V
Sbjct: 593 LTWTGFIYVWGCGPCLGVGAADAV-HLLPKIVESLRDV-HIVDISLGDCHCLALSADHEV 650

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQT--FRRKGIHVVRVSAGDEHVVA 337
           YS+G+ +    G G       P ++ T      GI + ++S G  H  A
Sbjct: 651 YSWGNNNMGQCGLGHC---FTPVSLPTKVLALDGIKIEQISTGTSHSFA 696


>gi|260832820|ref|XP_002611355.1| hypothetical protein BRAFLDRAFT_120334 [Branchiostoma floridae]
 gi|229296726|gb|EEN67365.1| hypothetical protein BRAFLDRAFT_120334 [Branchiostoma floridae]
          Length = 1187

 Score = 94.0 bits (232), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 77/252 (30%), Positives = 117/252 (46%), Gaps = 14/252 (5%)

Query: 96  FLQSVEHSSDIVETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSF 154
            L+S++H           + + +G  H L L S   VFS G +  G LGHG   + C   
Sbjct: 380 LLESIQH------VHIKKVAVNSGGKHCLALSSEGEVFSWGEAEDGKLGHGNRNS-CDRP 432

Query: 155 TRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK 214
             I       VV ++A   H+A +  +G++FT G       GH D+   + +P+LVEALK
Sbjct: 433 RVIESLRGKEVVDIAAGGAHSACITSTGELFTWGKGRYGRLGHGDSEDQM-KPKLVEALK 491

Query: 215 GVPCKQVTAGLNFTGFLTIRGH--VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
           GV    V  G      L I     V + G   +G+LG G +     P+ +  L   G VV
Sbjct: 492 GVRVIDVACGSGDAQTLCITDDDSVWSWGDGDYGKLGRGGSDGCKIPQKVEALIGQG-VV 550

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
           ++  G  + +A+T +G VY++G G    LGHG      +PR +     +G +V+ ++ G 
Sbjct: 551 KVECGSQFSVALTKSGCVYTWGKGDYHRLGHGSDDHVRRPRKVAAL--QGKNVISIATGS 608

Query: 333 EHVVALDSSGYV 344
            H VA    G V
Sbjct: 609 LHCVACTDQGEV 620



 Score = 57.4 bits (137), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 77/169 (45%), Gaps = 4/169 (2%)

Query: 118 TGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL I++  SV+S G    G LG G  +  C    ++       VV+V      + 
Sbjct: 502 SGDAQTLCITDDDSVWSWGDGDYGKLGRG-GSDGCKIPQKVEALIGQGVVKVECGSQFSV 560

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + +SG V+T G       GH   +  + RPR V AL+G     +  G       T +G 
Sbjct: 561 ALTKSGCVYTWGKGDYHRLGHGSDDH-VRRPRKVAALQGKNVISIATGSLHCVACTDQGE 619

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
           V T G N  GQLG G T   P P+ +A L+    + ++A G ++ LA +
Sbjct: 620 VFTWGDNDEGQLGDGSTSAIPRPRLVAALQG-KKINRVACGSAHSLAWS 667


>gi|345323388|ref|XP_001508293.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4
           [Ornithorhynchus anatinus]
          Length = 1006

 Score = 94.0 bits (232), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 76/248 (30%), Positives = 118/248 (47%), Gaps = 8/248 (3%)

Query: 101 EHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-I 157
           +    +V   A N+  ++ G  HTL +++   V++ G    G LG  P T +C+   R I
Sbjct: 22  QEREQVVALDAQNIVAVSCGDAHTLALNDKGQVYAWGLDTDGQLGL-PGTEECIRVPRNI 80

Query: 158 NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVP 217
              S   +VQVS    H+  + +  +VF+ G N     G     +    P+L+++L G+P
Sbjct: 81  KSLSDIQIVQVSCGYYHSLALSKGSEVFSWGQNKYGQLGLGFEFKKQTSPQLIKSLLGIP 140

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG 277
             Q+ AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V I  G
Sbjct: 141 FMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCG 199

Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +V+ G +H  A
Sbjct: 200 EDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHTSA 257

Query: 338 -LDSSGYV 344
            + SSG +
Sbjct: 258 FVPSSGRI 265



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 100/206 (48%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++ G YH+L +S  S VFS G +  G LG G E  +  S   I        +Q++A  
Sbjct: 89  VQVSCGYYHSLALSKGSEVFSWGQNKYGQLGLGFEFKKQTSPQLIKSLLGIPFMQIAAGG 148

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 149 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 207

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V Q+A G  +  A V  +G +
Sbjct: 208 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHTSAFVPSSGRI 265

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 266 YSFGLGGNGQLGTGSTSNRKSPFTVK 291


>gi|149042013|gb|EDL95854.1| rCG58270 [Rattus norvegicus]
          Length = 3507

 Score = 94.0 bits (232), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 124/237 (52%), Gaps = 14/237 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 2677 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 2735

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 2736 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 2794

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 2795 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 2851

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+V
Sbjct: 2852 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHV 2906



 Score = 84.7 bits (208), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 70/225 (31%), Positives = 110/225 (48%), Gaps = 7/225 (3%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 2739 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTS 2797

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHT 239
             G++FT G+      G  +T+     P  V AL+G    QV  GLN T  ++  G  V  
Sbjct: 2798 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 2856

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ +  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 2857 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 2915

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             L  G   +  +P+ I      G+ +  V+ G EH +AL S+G V
Sbjct: 2916 GLPEGRARNHNRPQQIPVL--AGVVIEDVAVGAEHTLALASTGDV 2958



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 104/229 (45%), Gaps = 13/229 (5%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ ++ S+  +F+ G+   G LG G  + + +   R+       + QV+   
Sbjct: 2783 VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 2841

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G +   F  GD      G+         P+ V+ L G+  K+V  G  F+ 
Sbjct: 2842 NHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS---SPQKVDVLCGIGIKKVACGTQFSV 2898

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNG 288
             LT  GHV+T G +    L  G   +   P+ I  L   G V++ +A G  + LA+   G
Sbjct: 2899 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVL--AGVVIEDVAVGAEHTLALASTG 2956

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             VY++GS S   LG G  +   +P  +   + K I   ++SAG  H  A
Sbjct: 2957 DVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIR--QISAGRCHSAA 3003



 Score = 57.8 bits (138), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 65/128 (50%), Gaps = 4/128 (3%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 2676 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 2735

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H  
Sbjct: 2736 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 2793

Query: 337  ALDSSGYV 344
             + S G +
Sbjct: 2794 VVTSDGKL 2801



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 79/180 (43%), Gaps = 11/180 (6%)

Query: 115  QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HTL +S   S V++ G    G LG G  T +  S  +++      + +V+   
Sbjct: 2836 QVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKVDVLCGIGIKKVACGT 2894

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + +  L GV  + V  G   T 
Sbjct: 2895 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQIPVLAGVVIEDVAVGAEHTL 2950

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L   G V+  GSN+ GQLG G T     P  +  L+   ++ QI+AG  +  A T   V
Sbjct: 2951 ALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQG-KNIRQISAGRCHSAAWTAPPV 3009


>gi|350405799|ref|XP_003487554.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Bombus impatiens]
          Length = 5118

 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 75/231 (32%), Positives = 111/231 (48%), Gaps = 13/231 (5%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSASENHA 175
            G++   L  +  +FS G    G LGHG      VS  +   I    +  +  ++    H+
Sbjct: 3350 GKHALALTQDGKIFSWGEGEDGKLGHG----NSVSLDKPRLIESLKSKRIRDIACGSGHS 3405

Query: 176  AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTI 233
            A +  SG+++T G       GH DT   + +P+LV++L G    QV  G     T  LT 
Sbjct: 3406 AAITSSGELYTWGLGEYGRLGHGDTATQM-KPKLVQSLVGQRVIQVACGSRDAQTMALTA 3464

Query: 234  RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
             G V++ G    G+LG G +    TP  I  L  +G VVQI  G  + LA+T  G V+++
Sbjct: 3465 DGSVYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLG-VVQIECGAQFSLALTKYGEVWTW 3523

Query: 294  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            G G  F LGHG  H   +P  ++  R  G  VV V+ G  H +A+  +G V
Sbjct: 3524 GKGDYFRLGHGNDHHVRKPTLVEGLR--GKKVVHVAVGALHCLAVTDTGQV 3572



 Score = 88.6 bits (218), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 69/220 (31%), Positives = 109/220 (49%), Gaps = 11/220 (5%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV--VQVSASENHAAFVLQSGQVFTC 187
             +++CG    G LG G ++  C     I F S   +  V V +   HA  + Q G++F+ 
Sbjct: 3307 KLYACGEGTNGRLGLGDDSNVC-EPKLIPFLSQYMIKKVAVHSGGKHALALTQDGKIFSW 3365

Query: 188  GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
            G+      GH ++   + +PRL+E+LK    + +  G   +  +T  G ++T G   +G+
Sbjct: 3366 GEGEDGKLGHGNS-VSLDKPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGR 3424

Query: 248  LGHGDTLDRPTPKSIAPLEEVGS-VVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGHG 304
            LGHGDT  +  PK +  L  VG  V+Q+A G   +  +A+T +G VYS+G G    LG G
Sbjct: 3425 LGHGDTATQMKPKLVQSL--VGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRG 3482

Query: 305  EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
                   P  I   R  G+ VV++  G +  +AL   G V
Sbjct: 3483 GSDGCYTPLLID--RLNGLGVVQIECGAQFSLALTKYGEV 3520



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 113/236 (47%), Gaps = 17/236 (7%)

Query: 118  TGRYHTLL--ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV----VQVSAS 171
            TG   TLL   ++  V++ G    G LG G   +  V        S  HV    V V++ 
Sbjct: 4298 TGGEQTLLAVTADGKVYATGYGAAGRLGIGGTDSVMVPTL---LESIQHVFVKKVAVNSG 4354

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFTGF 230
              H   +   G V++ G+      GH   NR ++ RP+L+E L G     +  G + +  
Sbjct: 4355 GKHCLALSSEGHVYSWGEGDDGKLGH--GNRLMYDRPKLIEELLGTEIVDIACGGHHSAA 4412

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLAVTGNG 288
            +T  G ++T G   +G+LGHGD+ D+ TPK +  L++   V+ +A  +G +  L VT + 
Sbjct: 4413 ITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLVEALQDY-KVIDVACGSGDAQTLCVTDDD 4471

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             V+S+G G    LG G       P  I++    G+ V++V  G +  VAL  SG +
Sbjct: 4472 NVWSWGDGDYGKLGRGGSDGCKIPMKIESL--AGLGVIKVECGSQFSVALTRSGAI 4525



 Score = 78.6 bits (192), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 66/240 (27%), Positives = 113/240 (47%), Gaps = 27/240 (11%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 169
           + G ++  L  +SSV+S G+   G LGHG       P+  + +    I F        ++
Sbjct: 504 SDGTHYLALTQDSSVYSWGNGDGGRLGHGDRVWYDEPKLVEALVDKNITF--------IA 555

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG-----VPCKQVTAG 224
               ++A +  +G+++T G  +    GH +++  +  P LV AL G     V C    +G
Sbjct: 556 CGSTYSAVLSSNGELYTWGRGNYGRLGHGNSDN-VLIPTLVTALNGHMVVYVACG---SG 611

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
            + T  +T  G V + G   +G+LG G      TPK +  L ++ +V ++  G  +  A+
Sbjct: 612 DSQTLCVTASGIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDI-NVAKVYCGGQFSAAL 670

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           T  G VY++G G  + LGHG +     P+ I+  + K   V  +  G+ HV+AL     V
Sbjct: 671 TAYGEVYTWGKGEGYRLGHGNEEHIRYPKVIEVLKPK--KVKELCVGNFHVLALTEDQLV 728



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 67/255 (26%), Positives = 114/255 (44%), Gaps = 20/255 (7%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSF 154
             L+S++H           + + +G  H L +S+   V+S G    G LGHG      + +
Sbjct: 4337 LLESIQH------VFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNR----LMY 4386

Query: 155  TR---INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE 211
             R   I       +V ++   +H+A +  +G ++T G       GH D+   +  P+LVE
Sbjct: 4387 DRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQL-TPKLVE 4445

Query: 212  ALKGVPCKQVTAGLNFTGFL--TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 269
            AL+      V  G      L  T   +V + G   +G+LG G +     P  I  L  +G
Sbjct: 4446 ALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLG 4505

Query: 270  SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
             V+++  G  + +A+T +G +Y++G G    LGHG      +PR +     +G  ++ ++
Sbjct: 4506 -VIKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGTDDHVRRPRKVAAL--QGKKIISIA 4562

Query: 330  AGDEHVVALDSSGYV 344
             G  H VA    G V
Sbjct: 4563 TGSLHCVACTDKGEV 4577



 Score = 64.7 bits (156), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 63/226 (27%), Positives = 98/226 (43%), Gaps = 8/226 (3%)

Query: 115  QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS--AS 171
             I  G  H+  I++S  +++ G    G LGHG   TQ +    +       V+QV+  + 
Sbjct: 3397 DIACGSGHSAAITSSGELYTWGLGEYGRLGHGDTATQ-MKPKLVQSLVGQRVIQVACGSR 3455

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
            +     +   G V++ GD      G R  +   + P L++ L G+   Q+  G  F+  L
Sbjct: 3456 DAQTMALTADGSVYSWGDGDFGKLG-RGGSDGCYTPLLIDRLNGLGVVQIECGAQFSLAL 3514

Query: 232  TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            T  G V T G   + +LGHG+      P  +  L     VV +A G  + LAVT  G VY
Sbjct: 3515 TKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRG-KKVVHVAVGALHCLAVTDTGQVY 3573

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            ++G   +   G+G      +P  +         V RVS G  H +A
Sbjct: 3574 AWGDNDHGQQGNGSTIVNKKPSLVHEL--DDARVNRVSCGSSHSIA 3617



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/227 (25%), Positives = 100/227 (44%), Gaps = 8/227 (3%)

Query: 114  MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            + I  G +H+  I+++  +++ G    G LGHG    Q ++   +       V+ V+   
Sbjct: 4401 VDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQ-LTPKLVEALQDYKVIDVACGS 4459

Query: 173  NHAAF--VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
              A    V     V++ GD      G R  +     P  +E+L G+   +V  G  F+  
Sbjct: 4460 GDAQTLCVTDDDNVWSWGDGDYGKLG-RGGSDGCKIPMKIESLAGLGVIKVECGSQFSVA 4518

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            LT  G ++T G   + +LGHG       P+ +A L+    ++ IA G  + +A T  G V
Sbjct: 4519 LTRSGAIYTWGKGDYHRLGHGTDDHVRRPRKVAALQG-KKIISIATGSLHCVACTDKGEV 4577

Query: 291  YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +++G      LG G      +PR +     +G  + RV+ G  H +A
Sbjct: 4578 FTWGDNDEGQLGDGTTSALQRPRLVHAL--QGKKITRVACGSAHTLA 4622



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 69/140 (49%), Gaps = 3/140 (2%)

Query: 204  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
            I  P   E L  +    +  G      ++  G ++ CG  T+G+LG GD  +   PK I 
Sbjct: 3275 IKLPVYSEVLSKLKPIHIAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDSNVCEPKLIP 3334

Query: 264  PLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
             L + +   V + +G  + LA+T +G ++S+G G +  LGHG      +PR I++ + K 
Sbjct: 3335 FLSQYMIKKVAVHSGGKHALALTQDGKIFSWGEGEDGKLGHGNSVSLDKPRLIESLKSKR 3394

Query: 323  IHVVRVSAGDEHVVALDSSG 342
            I    ++ G  H  A+ SSG
Sbjct: 3395 IR--DIACGSGHSAAITSSG 3412



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 68/139 (48%), Gaps = 3/139 (2%)

Query: 207  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            P L E+L  +   Q+T G      +T  G V+  G    G+LG G T     P  +  ++
Sbjct: 4283 PVLCESLSALRPVQLTGGEQTLLAVTADGKVYATGYGAAGRLGIGGTDSVMVPTLLESIQ 4342

Query: 267  EV-GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
             V    V + +G  + LA++  G VYS+G G +  LGHG +    +P+ I+     G  +
Sbjct: 4343 HVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLMYDRPKLIEELL--GTEI 4400

Query: 326  VRVSAGDEHVVALDSSGYV 344
            V ++ G  H  A+ S+G++
Sbjct: 4401 VDIACGGHHSAAITSAGWL 4419



 Score = 42.7 bits (99), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 5/110 (4%)

Query: 237  VHTCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
            V+  G N   QLG   G  +  P    +  L ++  +  IA G   +  V+  G +Y+ G
Sbjct: 3256 VYVWGLNDKDQLGGLKGSKIKLPVYSEV--LSKLKPI-HIAGGSKTLFVVSQEGKLYACG 3312

Query: 295  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             G+N  LG G+  +  +P+ I    +  I  V V +G +H +AL   G +
Sbjct: 3313 EGTNGRLGLGDDSNVCEPKLIPFLSQYMIKKVAVHSGGKHALALTQDGKI 3362


>gi|428164106|gb|EKX33145.1| hypothetical protein GUITHDRAFT_120666 [Guillardia theta CCMP2712]
          Length = 606

 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 79/243 (32%), Positives = 113/243 (46%), Gaps = 13/243 (5%)

Query: 112 GNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSF-TRINFPSAAHVVQVS 169
           G + ++ G  H   I S   +F+ G  LC     G ++ + V + TR++F     +V V+
Sbjct: 214 GIIDVSYGADHGAAIDSTGKLFTWG--LCDHGRLGLKSGKDVPYPTRVDFLKDEVIVDVT 271

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
                +A +    +VFT G  S    GH + +   + PR V AL  +P  QV  G     
Sbjct: 272 CGMYSSACISHDMKVFTWGSGSKGQLGHVEKSDE-WLPRSVAALHHIPIVQVALGYEHMA 330

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI--------APLEEVGSVVQIAAGPSYM 281
            L++ G V+T G   HGQLGHGD     TPK +          + +VGS V +A G S  
Sbjct: 331 ALSLDGDVYTWGEGEHGQLGHGDLNSCSTPKKLLLELENTTGEVADVGSPVLLACGASVT 390

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           L +T  G + SFG      LG GE+    +P  I +        V +SAGDEH  A+ S 
Sbjct: 391 LILTDYGRLISFGMSEFGALGLGEKRLAARPHLITSRIMDKRRFVHLSAGDEHCAAVTSK 450

Query: 342 GYV 344
           G V
Sbjct: 451 GNV 453



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 90/203 (44%), Gaps = 22/203 (10%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH---VVQVS 169
           + +T G Y +  IS +  VF+ GS   G LGH  ++ + +  +     +A H   +VQV+
Sbjct: 268 VDVTCGMYSSACISHDMKVFTWGSGSKGQLGHVEKSDEWLPRSV----AALHHIPIVQVA 323

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK---------GVPCKQ 220
               H A +   G V+T G+      GH D N      +L+  L+         G P   
Sbjct: 324 LGYEHMAALSLDGDVYTWGEGEHGQLGHGDLNSCSTPKKLLLELENTTGEVADVGSPV-L 382

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPS 279
           +  G + T  LT  G + + G +  G LG G+      P  I + + +    V ++AG  
Sbjct: 383 LACGASVTLILTDYGRLISFGMSEFGALGLGEKRLAARPHLITSRIMDKRRFVHLSAGDE 442

Query: 280 YMLAVTGNGVVYSFGSGSNFCLG 302
           +  AVT  G VY++G G   C G
Sbjct: 443 HCAAVTSKGNVYTWGQG---CFG 462



 Score = 38.9 bits (89), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 3/85 (3%)

Query: 261 SIAPLEEVGSVVQIAAGPSYM-LAVTGNGVVYSFGSGS--NFCLGHGEQHDELQPRAIQT 317
            +A L       ++ +GPS + L    +  +Y F  G   N+ LG G+   +  P+ + T
Sbjct: 148 DVAALRHEDPRARVVSGPSALSLQPRRDEAIYLFAWGCSHNYQLGTGQYQAQPFPKLVST 207

Query: 318 FRRKGIHVVRVSAGDEHVVALDSSG 342
             R G  ++ VS G +H  A+DS+G
Sbjct: 208 LTRLGNGIIDVSYGADHGAAIDSTG 232


>gi|195622006|gb|ACG32833.1| HECT domain and RCC1-like domain-containing protein 2 [Zea mays]
          Length = 353

 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/228 (30%), Positives = 115/228 (50%), Gaps = 5/228 (2%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           ++ G  H++ L++ + + S G    G LGHG    + V      F + A    +  +++ 
Sbjct: 18  VSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAPAITSVICGADHT 77

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
            A+     QV++ G       GH +++  +F P+ V+AL+G+  KQ+  G +    +T+ 
Sbjct: 78  TAYSEDELQVYSWGWGDFGRLGHGNSSD-VFTPQPVKALQGLKIKQIACGDSHCLAVTMA 136

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G V + G N +GQLG G T D   P+ I   E V  V  IAAG  +  AVT +G +Y +G
Sbjct: 137 GEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFESV-CVKMIAAGAEHTAAVTEDGDLYGWG 195

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            G    LG G+++D L P  + +   +G  +V V+ G  H + +  SG
Sbjct: 196 WGRYGNLGLGDRNDRLLPEKVSSV--EGEKMVLVACGWRHTITVSDSG 241



 Score = 81.6 bits (200), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 62/229 (27%), Positives = 107/229 (46%), Gaps = 7/229 (3%)

Query: 116 ITTGRYHTLLISNSS--VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           +  G  HT   S     V+S G    G LGHG  ++   +   +       + Q++  ++
Sbjct: 70  VICGADHTTAYSEDELQVYSWGWGDFGRLGHG-NSSDVFTPQPVKALQGLKIKQIACGDS 128

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H   V  +G+V + G N +   G   T   +  P+ ++A + V  K + AG   T  +T 
Sbjct: 129 HCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLL-PQKIQAFESVCVKMIAAGAEHTAAVTE 187

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G ++  G   +G LG GD  DR  P+ ++ +E    +V +A G  + + V+ +G +Y++
Sbjct: 188 DGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGE-KMVLVACGWRHTITVSDSGNLYTY 246

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           G      LGHG+  D L P  ++  +   I   ++S G  H +AL S G
Sbjct: 247 GWSKYGQLGHGDFEDHLVPHKVEALKDSTIS--QISGGWRHTMALTSEG 293



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/179 (31%), Positives = 83/179 (46%), Gaps = 5/179 (2%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           VV VSA  +H+  +L    + + G       GH D    +  P ++          V  G
Sbjct: 15  VVLVSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLV-PTVLSGFDAPAITSVICG 73

Query: 225 LNFT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            + T  +      V++ G    G+LGHG++ D  TP+ +  L+ +  + QIA G S+ LA
Sbjct: 74  ADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGL-KIKQIACGDSHCLA 132

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           VT  G V S+G   N  LG G   D L P+ IQ F    + V  ++AG EH  A+   G
Sbjct: 133 VTMAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFES--VCVKMIAAGAEHTAAVTEDG 189



 Score = 64.3 bits (155), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 91/202 (45%), Gaps = 4/202 (1%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI  G  H L ++ +  V S G +  G LG G  T   +   +I    +  V  ++A   
Sbjct: 122 QIACGDSHCLAVTMAGEVQSWGRNQNGQLGLG-TTEDSLLPQKIQAFESVCVKMIAAGAE 180

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H A V + G ++  G       G  D N  +  P  V +++G     V  G   T  ++ 
Sbjct: 181 HTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLL-PEKVSSVEGEKMVLVACGWRHTITVSD 239

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G+++T G + +GQLGHGD  D   P  +  L++  ++ QI+ G  + +A+T  G +Y +
Sbjct: 240 SGNLYTYGWSKYGQLGHGDFEDHLVPHKVEALKDS-TISQISGGWRHTMALTSEGKLYGW 298

Query: 294 GSGSNFCLGHGEQHDELQPRAI 315
           G      +G G   D   P  +
Sbjct: 299 GWNKFGQVGVGNNDDHSSPGQV 320



 Score = 51.2 bits (121), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 65/149 (43%), Gaps = 3/149 (2%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G  HT  ++ +  ++  G    G LG G    + +   +++      +V V+    H
Sbjct: 175 IAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLLP-EKVSSVEGEKMVLVACGWRH 233

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V  SG ++T G +     GH D    +  P  VEALK     Q++ G   T  LT  
Sbjct: 234 TITVSDSGNLYTYGWSKYGQLGHGDFEDHLV-PHKVEALKDSTISQISGGWRHTMALTSE 292

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           G ++  G N  GQ+G G+  D  +P  ++
Sbjct: 293 GKLYGWGWNKFGQVGVGNNDDHSSPGQVS 321



 Score = 38.1 bits (87), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 2/75 (2%)

Query: 263 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           AP     +VV ++AG S+ +A+    V+ S+G G +  LGHG+  D L P  +  F    
Sbjct: 7   APDSPPQTVVLVSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAPA 66

Query: 323 IHVVRVSAGDEHVVA 337
           I    V  G +H  A
Sbjct: 67  I--TSVICGADHTTA 79


>gi|449504701|ref|XP_002190698.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Taeniopygia
           guttata]
          Length = 991

 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/232 (31%), Positives = 113/232 (48%), Gaps = 7/232 (3%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           ++ G  HTL +++   V++ G +  G LG  P T +CV   R I   S   +VQV+    
Sbjct: 89  VSCGEAHTLALNDKGQVYAWGLATDGQLGL-PGTEECVRVPRNIRSLSEIQIVQVACGYY 147

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  + +  +VF+ G N     G     +    P+++++L G+P  Q+ AG   +  LT+
Sbjct: 148 HSLALSKGSEVFSWGQNKYGQLGLGYEYKKQTSPQMIKSLLGIPFAQIAAGGAHSFVLTL 207

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G +   G N  GQLG  D  DR  P  +  L     VV I  G  +  A+T  G V++F
Sbjct: 208 SGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRS-QKVVHICCGEDHTAALTKEGGVFTF 266

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYV 344
           G+G    LGH     E+ PR +  F   G  V +++ G +H  A + SSG +
Sbjct: 267 GAGGYGQLGHNSTSHEINPRKV--FELMGSVVTQITCGRQHTTAFVPSSGRI 316



 Score = 81.6 bits (200), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 68/206 (33%), Positives = 97/206 (47%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S  S VFS G +  G LG G E  +  S   I         Q++A  
Sbjct: 140 VQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQTSPQMIKSLLGIPFAQIAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDDNDR-YVPTLLKSLRSQKVVHICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GSVV QI  G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSVVTQITCGRQHTTAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGTTSNRKSPFTVK 342



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 103/226 (45%), Gaps = 7/226 (3%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKARKRPEHVGALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G  +    G   T   +  PR + +L  +   QV  G   +  L+    V +
Sbjct: 101 DKGQVYAWGLATDGQLGLPGTEECVRVPRNIRSLSEIQIVQVACGYYHSLALSKGSEVFS 160

Query: 240 CGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G    + T P+ I  L  +    QIAAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGYEYKKQTSPQMIKSLLGI-PFAQIAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             LG  + +D   P  +++ R +   VV +  G++H  AL   G V
Sbjct: 220 GQLGLNDDNDRYVPTLLKSLRSQ--KVVHICCGEDHTAALTKEGGV 263



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 67/213 (31%), Positives = 95/213 (44%), Gaps = 9/213 (4%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFLNKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 253
             GH    +   RP  V AL       V+ G   T  L  +G V+  G  T GQLG   T
Sbjct: 65  QLGHEKARK---RPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLPGT 121

Query: 254 LD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
            +    P++I  L E+  +VQ+A G  + LA++    V+S+G      LG G E   +  
Sbjct: 122 EECVRVPRNIRSLSEI-QIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           P+ I++    GI   +++AG  H   L  SG +
Sbjct: 181 PQMIKSLL--GIPFAQIAAGGAHSFVLTLSGAI 211


>gi|326673186|ref|XP_685685.5| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Danio rerio]
          Length = 1053

 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 73/249 (29%), Positives = 121/249 (48%), Gaps = 8/249 (3%)

Query: 101 EHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-I 157
           +    +V   A N+  ++ G  HTL +++   VF+ G    G LG       C+   R +
Sbjct: 73  KKPEQVVSLDAQNIVAVSCGEAHTLALNDKGQVFAWGLGSDGQLGLSI-VEDCLRVPRTV 131

Query: 158 NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVP 217
              S  H+ QV+    H+  + + G++F+ G N     G       +  P+++++L+G+P
Sbjct: 132 KSLSEVHITQVACGYWHSLALARGGEIFSWGQNKYGQLGLGQQGACVCSPQVIQSLQGIP 191

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG 277
             Q++AG   +  LT+ G +   G N  GQLG GD  DR  P  +  L     VV I  G
Sbjct: 192 FGQISAGGAHSFGLTLSGAIFGWGRNKFGQLGLGDNDDRRFPVLLKTLRS-QQVVYICCG 250

Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             +  A+T  G V++FG+G    LGH   + E+ PR +  F   G  V +++ G +H +A
Sbjct: 251 EDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKV--FELMGSVVSQIACGRQHTLA 308

Query: 338 -LDSSGYVS 345
            + SSG + 
Sbjct: 309 FIPSSGKID 317



 Score = 68.2 bits (165), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 58/191 (30%), Positives = 85/191 (44%), Gaps = 8/191 (4%)

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           R  F     V  V     H  F+L+ G V+TCG N     GH    +   +P  V +L  
Sbjct: 27  RCEFFEGKRVRDVGCGRRHTVFLLEDGTVYTCGCNDLGQLGHEKARK---KPEQVVSLDA 83

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQI 274
                V+ G   T  L  +G V   G  + GQLG     D    P+++  L EV  + Q+
Sbjct: 84  QNIVAVSCGEAHTLALNDKGQVFAWGLGSDGQLGLSIVEDCLRVPRTVKSLSEV-HITQV 142

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDE 333
           A G  + LA+   G ++S+G      LG G+Q   +  P+ IQ+   +GI   ++SAG  
Sbjct: 143 ACGYWHSLALARGGEIFSWGQNKYGQLGLGQQGACVCSPQVIQSL--QGIPFGQISAGGA 200

Query: 334 HVVALDSSGYV 344
           H   L  SG +
Sbjct: 201 HSFGLTLSGAI 211



 Score = 68.2 bits (165), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 93/205 (45%), Gaps = 6/205 (2%)

Query: 115 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+  G +H+L L     +FS G +  G LG G +     S   I         Q+SA   
Sbjct: 141 QVACGYWHSLALARGGEIFSWGQNKYGQLGLGQQGACVCSPQVIQSLQGIPFGQISAGGA 200

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  +  SG +F  G N     G  D +   F P L++ L+      +  G + T  LT 
Sbjct: 201 HSFGLTLSGAIFGWGRNKFGQLGLGDNDDRRF-PVLLKTLRSQQVVYICCGEDHTAALTK 259

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVY 291
            G V T G+  +GQLGH  T     P+ +   E +GSVV QIA G  + LA +  +G + 
Sbjct: 260 EGGVFTFGAGGYGQLGHNSTNHEVNPRKV--FELMGSVVSQIACGRQHTLAFIPSSGKID 317

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQ 316
           SFG G N  LG     + + P  ++
Sbjct: 318 SFGLGGNGQLGTRSTCNRISPTPVK 342



 Score = 67.8 bits (164), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 73/142 (51%), Gaps = 6/142 (4%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  E  +G   + V  G   T FL   G V+TCG N  GQLGH     R  P+ + 
Sbjct: 22  LLEPRRCEFFEGKRVRDVGCGRRHTVFLLEDGTVYTCGCNDLGQLGHEKA--RKKPEQVV 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKG 322
            L +  ++V ++ G ++ LA+   G V+++G GS+  LG     D L+ PR +++     
Sbjct: 80  SL-DAQNIVAVSCGEAHTLALNDKGQVFAWGLGSDGQLGLSIVEDCLRVPRTVKSLSE-- 136

Query: 323 IHVVRVSAGDEHVVALDSSGYV 344
           +H+ +V+ G  H +AL   G +
Sbjct: 137 VHITQVACGYWHSLALARGGEI 158


>gi|226495309|ref|NP_001141147.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
 gi|194702882|gb|ACF85525.1| unknown [Zea mays]
 gi|224030327|gb|ACN34239.1| unknown [Zea mays]
 gi|414587150|tpg|DAA37721.1| TPA: putative regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 443

 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/228 (30%), Positives = 115/228 (50%), Gaps = 5/228 (2%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           ++ G  H++ L++ + + S G    G LGHG    + V      F + A    +  +++ 
Sbjct: 18  VSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAPAITSVICGADHT 77

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
            A+     QV++ G       GH +++  +F P+ V+AL+G+  KQ+  G +    +T+ 
Sbjct: 78  TAYSEDELQVYSWGWGDFGRLGHGNSSD-VFTPQPVKALQGLKIKQIACGDSHCLAVTMA 136

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G V + G N +GQLG G T D   P+ I   E V  V  IAAG  +  AVT +G +Y +G
Sbjct: 137 GEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFESV-CVKMIAAGAEHTAAVTEDGDLYGWG 195

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            G    LG G+++D L P  + +   +G  +V V+ G  H + +  SG
Sbjct: 196 WGRYGNLGLGDRNDRLLPEKVSSV--EGEKMVLVACGWRHTITVSDSG 241



 Score = 71.6 bits (174), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 93/208 (44%), Gaps = 4/208 (1%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G  HT  ++ +  ++  G    G LG G    + +   +++      +V V+    H
Sbjct: 175 IAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLLP-EKVSSVEGEKMVLVACGWRH 233

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V  SG ++T G +     GH D    +  P  VEALK     Q++ G   T  LT  
Sbjct: 234 TITVSDSGNLYTYGWSKYGQLGHGDFEDHLV-PHKVEALKDSTISQISGGWRHTMALTSE 292

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G ++  G N  GQ+G G+  D  +P  ++   E   + Q+A G  + LA++    V+S+G
Sbjct: 293 GKLYGWGWNKFGQVGVGNNDDHSSPGQVS-FPEDQKISQVACGWRHTLALSEKKNVFSWG 351

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKG 322
            G++  LG+GE  D   P  I      G
Sbjct: 352 RGTSGQLGNGEIVDRNTPVLIDALSSDG 379



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/179 (31%), Positives = 84/179 (46%), Gaps = 5/179 (2%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           VV VSA  +H+  +L    + + G       GH D    +  P ++          V  G
Sbjct: 15  VVLVSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLV-PTVLSGFDAPAITSVICG 73

Query: 225 LNFT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            + T  +      V++ G    G+LGHG++ D  TP+ +  L+ +  + QIA G S+ LA
Sbjct: 74  ADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGL-KIKQIACGDSHCLA 132

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           VT  G V S+G   N  LG G   D L P+ IQ F  + + V  ++AG EH  A+   G
Sbjct: 133 VTMAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAF--ESVCVKMIAAGAEHTAAVTEDG 189



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 61/225 (27%), Positives = 101/225 (44%), Gaps = 6/225 (2%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI  G  H L ++ +  V S G +  G LG G  T   +   +I    +  V  ++A   
Sbjct: 122 QIACGDSHCLAVTMAGEVQSWGRNQNGQLGLG-TTEDSLLPQKIQAFESVCVKMIAAGAE 180

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H A V + G ++  G       G  D N  +  P  V +++G     V  G   T  ++ 
Sbjct: 181 HTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLL-PEKVSSVEGEKMVLVACGWRHTITVSD 239

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G+++T G + +GQLGHGD  D   P  +  L++  ++ QI+ G  + +A+T  G +Y +
Sbjct: 240 SGNLYTYGWSKYGQLGHGDFEDHLVPHKVEALKD-STISQISGGWRHTMALTSEGKLYGW 298

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           G      +G G   D   P  +     + I   +V+ G  H +AL
Sbjct: 299 GWNKFGQVGVGNNDDHSSPGQVSFPEDQKIS--QVACGWRHTLAL 341



 Score = 51.2 bits (121), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 72/161 (44%), Gaps = 7/161 (4%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HT+ +S+S ++++ G S  G LGHG      V   ++     + + Q+S    H
Sbjct: 227 VACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDHLVPH-KVEALKDSTISQISGGWRH 285

Query: 175 AAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
              +   G+++  G N       G+ D +    +    E  K     QV  G   T  L+
Sbjct: 286 TMALTSEGKLYGWGWNKFGQVGVGNNDDHSSPGQVSFPEDQK---ISQVACGWRHTLALS 342

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            + +V + G  T GQLG+G+ +DR TP  I  L   GS  +
Sbjct: 343 EKKNVFSWGRGTSGQLGNGEIVDRNTPVLIDALSSDGSACK 383



 Score = 38.1 bits (87), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 2/75 (2%)

Query: 263 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           AP     +VV ++AG S+ +A+    V+ S+G G +  LGHG+  D L P  +  F    
Sbjct: 7   APDSPPQTVVLVSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAPA 66

Query: 323 IHVVRVSAGDEHVVA 337
           I    V  G +H  A
Sbjct: 67  I--TSVICGADHTTA 79


>gi|301755552|ref|XP_002913643.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like
           [Ailuropoda melanoleuca]
          Length = 1129

 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 110/227 (48%), Gaps = 7/227 (3%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H+V V+  E+H+  +
Sbjct: 122 GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIVHVACGESHSLAL 178

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 179 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 238

Query: 239 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 239 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 297

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V
Sbjct: 298 AGQLGLSDEEDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGV 342



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 75/234 (32%), Positives = 113/234 (48%), Gaps = 7/234 (2%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 166 VHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 224

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 225 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 284

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 285 SLSGAVFGWGMNNAGQLGLSDEEDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVF 343

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYV 344
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +
Sbjct: 344 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLI 395



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 58/189 (30%), Positives = 101/189 (53%), Gaps = 10/189 (5%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N    +P  + AL    
Sbjct: 109 FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN----KPEQIGALADQH 164

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 165 IVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 223

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 224 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 281

Query: 336 VALDSSGYV 344
            AL  SG V
Sbjct: 282 FALSLSGAV 290



 Score = 72.4 bits (176), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 65/195 (33%), Positives = 96/195 (49%), Gaps = 8/195 (4%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++ G +H L L ++   F+ G +  G LG G E     S  R+       + QV+A  
Sbjct: 219 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGG 278

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
            H+  +  SG VF  G N++   G  D  +R    P  V+ L+      ++ G   T  L
Sbjct: 279 AHSFALSLSGAVFGWGMNNAGQLGLSDEEDRE--SPCHVKLLRTQKVVYISCGEEHTAVL 336

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGNGV 289
           T  G V T G+ + GQLGH    D   P+ +  LE +GS V QIA G  + LA V  +G+
Sbjct: 337 TKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGL 394

Query: 290 VYSFGSGSNFCLGHG 304
           +Y+FG G+   LG G
Sbjct: 395 IYAFGCGARGQLGTG 409



 Score = 71.6 bits (174), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 51/165 (30%), Positives = 83/165 (50%), Gaps = 25/165 (15%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 81  LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 140

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           T GQLGH    ++P        E++G+     +V +A G S+ LA++  G ++S+G+GS+
Sbjct: 141 TKGQLGHEREGNKP--------EQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSD 192

Query: 299 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G
Sbjct: 193 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADG 235


>gi|348529614|ref|XP_003452308.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Oreochromis
           niloticus]
          Length = 1004

 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 75/232 (32%), Positives = 113/232 (48%), Gaps = 7/232 (3%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH-VVQVSASEN 173
           ++ GR H++ ++    +F+ G+   G LG G  T   V   R+      H + QV     
Sbjct: 88  VSCGRGHSMAVNEQGQLFAWGAGDGGQLGLG-TTETTVRIPRLVKRLCDHRISQVMCGNQ 146

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H   + + GQ+FT G N+S   G          P  +++L G+P  Q+TAG + +  L++
Sbjct: 147 HCVALSRDGQLFTWGQNTSGQLGLGKGEPSKLFPHPLKSLAGIPLAQITAGGDHSFALSL 206

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V   G N  GQLG  D  DR  P  I  L     VV I+ G  +  A+T +G +++F
Sbjct: 207 SGAVFGWGKNRAGQLGLNDKQDRAVPCHIKFLRS-QKVVYISCGDEHTAALTKDGGLFTF 265

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYV 344
           G GS   LGHG  + EL PR +      G  V +++ G  H +A + SSG V
Sbjct: 266 GDGSWGQLGHGSTNSELLPRRV--LELMGTEVSQIACGRHHTLAFVPSSGVV 315



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 71/231 (30%), Positives = 102/231 (44%), Gaps = 19/231 (8%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGH-----GPETTQCVSFTRINFPSAAHVVQVSASEN 173
           G++   L+ + SV++CGS+ CG LGH      PE    +   +I          VS    
Sbjct: 42  GQHSVFLMHDGSVYTCGSNSCGQLGHDKAGISPEVVGALDTQKITM--------VSCGRG 93

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  V + GQ+F  G       G   T   +  PRLV+ L      QV  G      L+ 
Sbjct: 94  HSMAVNEQGQLFAWGAGDGGQLGLGTTETTVRIPRLVKRLCDHRISQVMCGNQHCVALSR 153

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV--VQIAAGPSYMLAVTGNGVVY 291
            G + T G NT GQLG G     P+     PL+ +  +   QI AG  +  A++ +G V+
Sbjct: 154 DGQLFTWGQNTSGQLGLGK--GEPSKLFPHPLKSLAGIPLAQITAGGDHSFALSLSGAVF 211

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            +G      LG  ++ D   P  I+  R +   VV +S GDEH  AL   G
Sbjct: 212 GWGKNRAGQLGLNDKQDRAVPCHIKFLRSQ--KVVYISCGDEHTAALTKDG 260



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/158 (34%), Positives = 76/158 (48%), Gaps = 7/158 (4%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QIT G  H+  +S S +VF  G +  G LG   +  + V    I F  +  VV +S  + 
Sbjct: 193 QITAGGDHSFALSLSGAVFGWGKNRAGQLGLNDKQDRAVP-CHIKFLRSQKVVYISCGDE 251

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFLT 232
           H A + + G +FT GD S    GH  TN  +  PR V  L G    Q+  G + T  F+ 
Sbjct: 252 HTAALTKDGGLFTFGDGSWGQLGHGSTNSELL-PRRVLELMGTEVSQIACGRHHTLAFVP 310

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTP---KSIAPLEE 267
             G V+  G N+HGQLG G   D  +P   K+  P E+
Sbjct: 311 SSGVVYAFGCNSHGQLGTGILGDARSPFPVKTSVPSED 348



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 99/207 (47%), Gaps = 8/207 (3%)

Query: 115 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+  G  H + +S +  +F+ G +  G LG G      +    +   +   + Q++A  +
Sbjct: 140 QVMCGNQHCVALSRDGQLFTWGQNTSGQLGLGKGEPSKLFPHPLKSLAGIPLAQITAGGD 199

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           H+  +  SG VF  G N +   G  D  +R +  P  ++ L+      ++ G   T  LT
Sbjct: 200 HSFALSLSGAVFGWGKNRAGQLGLNDKQDRAV--PCHIKFLRSQKVVYISCGDEHTAALT 257

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGNGVV 290
             G + T G  + GQLGHG T     P+ +  LE +G+ V QIA G  + LA V  +GVV
Sbjct: 258 KDGGLFTFGDGSWGQLGHGSTNSELLPRRV--LELMGTEVSQIACGRHHTLAFVPSSGVV 315

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQT 317
           Y+FG  S+  LG G   D   P  ++T
Sbjct: 316 YAFGCNSHGQLGTGILGDARSPFPVKT 342



 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 100/212 (47%), Gaps = 8/212 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFC 194
           G++  G LG G E          +  S   + +V     H+ F++  G V+TCG NS   
Sbjct: 5   GNAKDGQLGIGVEKNPVFEPRNCHVFSGRGLKEVGCGGQHSVFLMHDGSVYTCGSNS--- 61

Query: 195 CGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT- 253
           CG    ++    P +V AL       V+ G   +  +  +G +   G+   GQLG G T 
Sbjct: 62  CGQLGHDKAGISPEVVGALDTQKITMVSCGRGHSMAVNEQGQLFAWGAGDGGQLGLGTTE 121

Query: 254 LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQP 312
                P+ +  L +   + Q+  G  + +A++ +G ++++G  ++  LG G+ +  +L P
Sbjct: 122 TTVRIPRLVKRLCD-HRISQVMCGNQHCVALSRDGQLFTWGQNTSGQLGLGKGEPSKLFP 180

Query: 313 RAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             +++    GI + +++AG +H  AL  SG V
Sbjct: 181 HPLKSL--AGIPLAQITAGGDHSFALSLSGAV 210


>gi|410957260|ref|XP_003985249.1| PREDICTED: LOW QUALITY PROTEIN: E3 ISG15--protein ligase HERC5
           [Felis catus]
          Length = 1143

 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 78/246 (31%), Positives = 121/246 (49%), Gaps = 15/246 (6%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QIT G YH+L +S    +F+ G +L G LG G +         +   S   +VQ+SA +
Sbjct: 259 IQITCGDYHSLALSKGGELFAWGQNLHGQLGIGSQFASIAIPQIVENLSGIPLVQISAGK 318

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +++ G N     G   T+   F P L+EAL     + +  G + T  LT
Sbjct: 319 AHSMALSMSGNIYSWGRNDFGQLGLGHTDGKDF-PSLIEALDNQKVEFLACGGSHTALLT 377

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA-VTGNGVVY 291
             G V T G+  HGQLGH  T +   P+ +  L     V QIA G  + LA V+  G V+
Sbjct: 378 KDGLVFTFGAGKHGQLGHNSTQNELRPRLVTELAG-NRVTQIACGRQHTLAYVSDLGKVF 436

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQ-------TF--RRKGIHVVRVSAGDEHVVAL--DS 340
           SFGSG    LG+G  H++L P  ++       TF  R     ++ ++ G++ ++      
Sbjct: 437 SFGSGKEGQLGNGGTHNQLIPLPMKLPSNEELTFESRASEKELIMIAGGNQSILLWMGKK 496

Query: 341 SGYVSL 346
           + YV+L
Sbjct: 497 NSYVNL 502



 Score = 85.5 bits (210), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 52/173 (30%), Positives = 93/173 (53%), Gaps = 3/173 (1%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           ++Q++  + H+  + + G++F  G N     G       I  P++VE L G+P  Q++AG
Sbjct: 258 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGIGSQFASIAIPQIVENLSGIPLVQISAG 317

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
              +  L++ G++++ G N  GQLG G T  +  P  I  L+    V  +A G S+   +
Sbjct: 318 KAHSMALSMSGNIYSWGRNDFGQLGLGHTDGKDFPSLIEALDN-QKVEFLACGGSHTALL 376

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           T +G+V++FG+G +  LGH    +EL+PR +      G  V +++ G +H +A
Sbjct: 377 TKDGLVFTFGAGKHGQLGHNSTQNELRPRLVTEL--AGNRVTQIACGRQHTLA 427


>gi|432092257|gb|ELK24881.1| Putative E3 ubiquitin-protein ligase HERC1 [Myotis davidii]
          Length = 4856

 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 68/222 (30%), Positives = 116/222 (52%), Gaps = 13/222 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
           V+SFG G N  LGHG+ +   +P+ I+    +G+ + +V AG
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEAL--QGMFIRKVCAG 622



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 73/243 (30%), Positives = 123/243 (50%), Gaps = 17/243 (6%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4017 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4075

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4076 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4134

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGS------VVQIAAGPSYML 282
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G       +  +A G ++ L
Sbjct: 4135 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQARNKSIICSVACGLNHTL 4194

Query: 283  AVTGNG-VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
            AV+ +G +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   
Sbjct: 4195 AVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKD 4252

Query: 342  GYV 344
            G V
Sbjct: 4253 GQV 4255



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 68/234 (29%), Positives = 110/234 (47%), Gaps = 16/234 (6%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 4079 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTS 4137

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ---------VTAGLNFTGFL 231
             G++FT G+      G  +T+     P  V AL+G    Q         V  GLN T  +
Sbjct: 4138 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQARNKSIICSVACGLNHTLAV 4196

Query: 232  TIRGH-VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            +  G  V   G   +G+LG G++  + +P+ +  L  +G + ++A G  + +A+T +G V
Sbjct: 4197 SADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVALTKDGQV 4255

Query: 291  YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            Y+FG      L  G   +  +P+ +      G+ +  V+ G EH +AL S+G +
Sbjct: 4256 YTFGQDRLIGLPEGRARNHNRPQQVPVL--AGVVIEDVAVGAEHTLALTSTGDI 4307



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 110/234 (47%), Gaps = 38/234 (16%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS----AAHVVQVSASENHA 175
           R+   +  +  +++ G    G LGHG   ++       N P+     ++V +VS   +H 
Sbjct: 521 RHSAAVTEDGELYTWGEGDFGRLGHGDSNSR-------NIPTLVKDISNVGEVSCGSSHT 573

Query: 176 AFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             + + G+    F  GDN     GH DTNR +++P+++EAL+G+  ++V AG   +  LT
Sbjct: 574 IALSKDGRTVWSFGGGDNGKL--GHGDTNR-VYKPKVIEALQGMFIRKVCAGSQSSLSLT 630

Query: 233 IRGHVHT--------CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             G V+         CGS+    L          PK I  L     +V I+ G S+ LA+
Sbjct: 631 STGQVYAWGCGACLGCGSSEATAL---------RPKLIEELAAT-RIVDISIGDSHCLAL 680

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           + +  VY++G+ S    G G     + +P+ +      GI + +VSAG  H +A
Sbjct: 681 SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGL--DGIAIQQVSAGTSHSLA 732



 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 84/189 (44%), Gaps = 14/189 (7%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSG 342
           H +AL   G
Sbjct: 572 HTIALSKDG 580



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 65/128 (50%), Gaps = 4/128 (3%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 4016 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4075

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H  
Sbjct: 4076 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 4133

Query: 337  ALDSSGYV 344
             + S G +
Sbjct: 4134 VVTSDGKL 4141



 Score = 57.8 bits (138), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 63/237 (26%), Positives = 105/237 (44%), Gaps = 20/237 (8%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 165
            +Q++ G  H+ ++ S+  +F+ G+   G LG G       PE    +   +I       +
Sbjct: 4123 VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQARNKSI 4182

Query: 166  V-QVSASENHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
            +  V+   NH   V   G +   F  GD      G+         P+ V+ L G+  K+V
Sbjct: 4183 ICSVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS---SPQKVDVLCGIGIKKV 4239

Query: 222  TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSY 280
              G  F+  LT  G V+T G +    L  G   +   P+ +  L   G V++ +A G  +
Sbjct: 4240 ACGTQFSVALTKDGQVYTFGQDRLIGLPEGRARNHNRPQQVPVL--AGVVIEDVAVGAEH 4297

Query: 281  MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             LA+T  G +Y++GS S   LG G  +   +P  +     +G +V ++SAG  H  A
Sbjct: 4298 TLALTSTGDIYAWGSNSEGQLGLGHTNHVREPTLVTVL--QGKNVRQISAGRCHSAA 4352



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/175 (26%), Positives = 84/175 (48%), Gaps = 7/175 (4%)

Query: 115 QITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++ G  HT+ +S    +V+S G    G LGHG +T +      I       + +V A  
Sbjct: 565 EVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEALQGMFIRKVCAGS 623

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             +  +  +GQV+  G  +   CG  +      RP+L+E L       ++ G +    L+
Sbjct: 624 QSSLSLTSTGQVYAWGCGACLGCGSSEAT--ALRPKLIEELAATRIVDISIGDSHCLALS 681

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
               V+  G+N+ GQ G G++    T PK ++ L+ + ++ Q++AG S+ LA T 
Sbjct: 682 HDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI-AIQQVSAGTSHSLAWTA 735



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 53/179 (29%), Positives = 80/179 (44%), Gaps = 11/179 (6%)

Query: 116  ITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
            +  G  HTL +S   S V++ G    G LG G  T +  S  +++      + +V+    
Sbjct: 4186 VACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKVDVLCGIGIKKVACGTQ 4244

Query: 174  HAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
             +  + + GQV+T G +          R+ NRP    + V  L GV  + V  G   T  
Sbjct: 4245 FSVALTKDGQVYTFGQDRLIGLPEGRARNHNRP----QQVPVLAGVVIEDVAVGAEHTLA 4300

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
            LT  G ++  GSN+ GQLG G T     P  +  L+   +V QI+AG  +  A T   V
Sbjct: 4301 LTSTGDIYAWGSNSEGQLGLGHTNHVREPTLVTVLQG-KNVRQISAGRCHSAAWTAPPV 4358


>gi|115458498|ref|NP_001052849.1| Os04g0435700 [Oryza sativa Japonica Group]
 gi|32487442|emb|CAE02741.1| OSJNBa0006B20.1 [Oryza sativa Japonica Group]
 gi|113564420|dbj|BAF14763.1| Os04g0435700 [Oryza sativa Japonica Group]
 gi|125548381|gb|EAY94203.1| hypothetical protein OsI_15977 [Oryza sativa Indica Group]
 gi|125590466|gb|EAZ30816.1| hypothetical protein OsJ_14886 [Oryza sativa Japonica Group]
 gi|215704772|dbj|BAG94800.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 453

 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 70/230 (30%), Positives = 118/230 (51%), Gaps = 7/230 (3%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ--VSASE 172
           ++ G  H++ L++ + + S G    G LGHG    + V      F +AA  +   +  ++
Sbjct: 27  VSAGASHSVALLAGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAAAPGITSVICGAD 86

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           +  A+     QV++ G       GH +++  +F P+ V+AL+G+  KQ+  G +    +T
Sbjct: 87  HTTAYSEDEQQVYSWGWGDFGRLGHGNSSD-VFTPQPVKALQGIKIKQIACGDSHCLAVT 145

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
           + G V + G N +GQLG G T D   P+ I   E V  V  IAAG  +  AVT +G +Y 
Sbjct: 146 MAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQSFEGV-CVKMIAAGAEHTAAVTEDGDLYG 204

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           +G G    LG G+++D L P  + +   +G  +V ++ G  H + + SSG
Sbjct: 205 WGWGRYGNLGLGDRNDRLVPEKVSSV--EGEKMVLIACGWRHTITVSSSG 252



 Score = 84.0 bits (206), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 64/235 (27%), Positives = 110/235 (46%), Gaps = 7/235 (2%)

Query: 110 SAGNMQITTGRYHTLLISNSS--VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ 167
           + G   +  G  HT   S     V+S G    G LGHG  ++   +   +       + Q
Sbjct: 75  APGITSVICGADHTTAYSEDEQQVYSWGWGDFGRLGHG-NSSDVFTPQPVKALQGIKIKQ 133

Query: 168 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
           ++  ++H   V  +G+V + G N +   G   T   +  P+ +++ +GV  K + AG   
Sbjct: 134 IACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLL-PQKIQSFEGVCVKMIAAGAEH 192

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           T  +T  G ++  G   +G LG GD  DR  P+ ++ +E    +V IA G  + + V+ +
Sbjct: 193 TAAVTEDGDLYGWGWGRYGNLGLGDRNDRLVPEKVSSVEGE-KMVLIACGWRHTITVSSS 251

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           G +Y++G      LGHG+  D L P  ++  +   I   ++S G  H +AL S G
Sbjct: 252 GSLYTYGWSKYGQLGHGDFEDHLVPHKLEALKDSSIS--QISGGWRHTMALTSDG 304



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 92/208 (44%), Gaps = 4/208 (1%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G  HT  ++ +  ++  G    G LG G    + V   +++      +V ++    H
Sbjct: 186 IAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLVP-EKVSSVEGEKMVLIACGWRH 244

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V  SG ++T G +     GH D    +  P  +EALK     Q++ G   T  LT  
Sbjct: 245 TITVSSSGSLYTYGWSKYGQLGHGDFEDHLV-PHKLEALKDSSISQISGGWRHTMALTSD 303

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G ++  G N  GQ+G GDT D   P  +    E   V Q+A G  + LA T    V+S+G
Sbjct: 304 GKLYGWGWNKFGQVGVGDTDDHCFPVQVK-FPEDQKVAQVACGWRHTLAFTEKKNVFSWG 362

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKG 322
            G++  LGHGE  D  +P  I      G
Sbjct: 363 RGTSGQLGHGEIVDRNKPVMIDALSPDG 390



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 60/190 (31%), Positives = 89/190 (46%), Gaps = 9/190 (4%)

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR---PIFRPRLVEA 212
           R + P A  VV VSA  +H+  +L    + + G       GH D      P        A
Sbjct: 17  REDPPPA--VVLVSAGASHSVALLAGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAA 74

Query: 213 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
             G+    +    + T +      V++ G    G+LGHG++ D  TP+ +  L+ +  + 
Sbjct: 75  APGI-TSVICGADHTTAYSEDEQQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGI-KIK 132

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
           QIA G S+ LAVT  G V S+G   N  LG G   D L P+ IQ+F  +G+ V  ++AG 
Sbjct: 133 QIACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQSF--EGVCVKMIAAGA 190

Query: 333 EHVVALDSSG 342
           EH  A+   G
Sbjct: 191 EHTAAVTEDG 200



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 53/108 (49%), Gaps = 4/108 (3%)

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGN-GVVYSFGSG 296
           + G    GQLGHGD  DR  P  ++  +     +  +  G  +  A + +   VYS+G G
Sbjct: 45  SWGRGEDGQLGHGDAEDRLVPTVLSGFDAAAPGITSVICGADHTTAYSEDEQQVYSWGWG 104

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
               LGHG   D   P+ ++    +GI + +++ GD H +A+  +G V
Sbjct: 105 DFGRLGHGNSSDVFTPQPVKAL--QGIKIKQIACGDSHCLAVTMAGEV 150


>gi|350587982|ref|XP_003129374.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Sus scrofa]
          Length = 1050

 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 110/227 (48%), Gaps = 7/227 (3%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H+V V+  E+H+  +
Sbjct: 43  GDHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADEHIVHVACGESHSLAL 99

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEESVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 239 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V
Sbjct: 219 AGQLGLSDEEDRESPCHVKLLRAQ--KVVYISCGEEHTAVLTKSGGV 263



 Score = 90.9 bits (224), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 75/234 (32%), Positives = 114/234 (48%), Gaps = 7/234 (2%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T + V+  R I   +   ++QVS  
Sbjct: 87  VHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEESVAVPRLIQKLNQQTILQVSCG 145

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLR-AQKVVYISCGEEHTAVLTKSGGVF 264

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYV 344
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLI 316



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 65/195 (33%), Positives = 96/195 (49%), Gaps = 8/195 (4%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++ G +H L L ++   F+ G +  G LG G E     S  R+       + QV+A  
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
            H+  +  SG VF  G N++   G  D  +R    P  V+ L+      ++ G   T  L
Sbjct: 200 AHSFALSLSGAVFGWGMNNAGQLGLSDEEDRE--SPCHVKLLRAQKVVYISCGEEHTAVL 257

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGNGV 289
           T  G V T G+ + GQLGH    D   P+ +  LE +GS V QIA G  + LA V  +G+
Sbjct: 258 TKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGL 315

Query: 290 VYSFGSGSNFCLGHG 304
           +Y+FG G+   LG G
Sbjct: 316 IYAFGCGARGQLGTG 330



 Score = 68.2 bits (165), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 49/165 (29%), Positives = 83/165 (50%), Gaps = 25/165 (15%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         +  P++   +     K+V  G + + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGDHSVFLLEDGEVYTCGLN 61

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           T GQLGH    ++P        E++G+     +V +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADEHIVHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 299 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
             LG     + +  PR IQ   ++ I  ++VS G+ H +AL + G
Sbjct: 114 GQLGLMTTEESVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADG 156


>gi|344251059|gb|EGW07163.1| putative E3 ubiquitin-protein ligase HERC1 [Cricetulus griseus]
          Length = 1016

 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 73/237 (30%), Positives = 124/237 (52%), Gaps = 14/237 (5%)

Query: 115 QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
           Q+  G+  T +I +N +V +CG    G LG G  +      T I+      V Q+     
Sbjct: 186 QVICGQNCTFVIQANGTVLACGEGSYGRLGQG-NSDDLHVLTVISALQGFVVTQLVTSCG 244

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
           S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 245 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 303

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
           +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 304 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 360

Query: 289 -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+V
Sbjct: 361 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHV 415



 Score = 84.3 bits (207), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 70/225 (31%), Positives = 110/225 (48%), Gaps = 7/225 (3%)

Query: 122 HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 248 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRP-RQIEALQGEEVVQMSCGFKHSAVVTS 306

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHT 239
            G++FT G+      G  +T+     P  V AL+G    QV  GLN T  ++  G  V  
Sbjct: 307 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 365

Query: 240 CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
            G   +G+LG G++  + +P+ +  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 366 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 424

Query: 300 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            L  G   +  +P+ I      G+ +  V+ G EH +AL S+G V
Sbjct: 425 GLPEGRARNHNRPQQIPVL--AGVVIEDVAVGAEHTLALASTGDV 467



 Score = 63.9 bits (154), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 104/229 (45%), Gaps = 13/229 (5%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++ G  H+ ++ S+  +F+ G+   G LG G  + + +   R+       + QV+   
Sbjct: 292 VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 350

Query: 173 NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
           NH   V   G +   F  GD      G+         P+ V+ L G+  K+V  G  F+ 
Sbjct: 351 NHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS---SPQKVDVLCGIGIKKVACGTQFSV 407

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNG 288
            LT  GHV+T G +    L  G   +   P+ I  L   G V++ +A G  + LA+   G
Sbjct: 408 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVL--AGVVIEDVAVGAEHTLALASTG 465

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            VY++GS S   LG G  +   +P  +   + K I   ++SAG  H  A
Sbjct: 466 DVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIR--QISAGRCHSAA 512



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 64/126 (50%), Gaps = 4/126 (3%)

Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
           +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 185 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 244

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
              + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H  
Sbjct: 245 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 302

Query: 337 ALDSSG 342
            + S G
Sbjct: 303 VVTSDG 308



 Score = 48.1 bits (113), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 79/180 (43%), Gaps = 11/180 (6%)

Query: 115 QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           Q+  G  HTL +S   S V++ G    G LG G  T +  S  +++      + +V+   
Sbjct: 345 QVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKVDVLCGIGIKKVACGT 403

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
             +  + + G V+T G +          R+ NRP    + +  L GV  + V  G   T 
Sbjct: 404 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQIPVLAGVVIEDVAVGAEHTL 459

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
            L   G V+  GSN+ GQLG G T     P  +  L+   ++ QI+AG  +  A T   V
Sbjct: 460 ALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQG-KNIRQISAGRCHSAAWTAPPV 518


>gi|348563446|ref|XP_003467518.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Cavia
           porcellus]
          Length = 1050

 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 109/227 (48%), Gaps = 7/227 (3%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  Q     +I   +  H++ V+  E+H+  +
Sbjct: 43  GDHCVFLLEDGEVYTCGLNTKGQLGHEREGNQP---EQIGALADQHIIHVACGESHSLAL 99

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALATDGQFF 159

Query: 239 TCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G      T P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQTSPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGV 263



 Score = 90.9 bits (224), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 75/234 (32%), Positives = 113/234 (48%), Gaps = 7/234 (2%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDQGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALATDGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVF 264

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYV 344
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLI 316



 Score = 72.4 bits (176), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 64/194 (32%), Positives = 95/194 (48%), Gaps = 6/194 (3%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++ G +H L L ++   F+ G +  G LG G E     S  R+       + QV+A  
Sbjct: 140 LQVSCGNWHCLALATDGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG VF  G N++   G  D  +    P  V+ L+      ++ G   T  LT
Sbjct: 200 AHSFALSLSGAVFGWGMNNAGQLGLSD-EKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGNGVV 290
             G V T G+ + GQLGH    D   P+ +  LE +GS V QIA G  + LA V  +G++
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLI 316

Query: 291 YSFGSGSNFCLGHG 304
           Y+FG G+   LG G
Sbjct: 317 YAFGCGARGQLGTG 330



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/130 (34%), Positives = 72/130 (55%), Gaps = 16/130 (12%)

Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQ 273
           K+V  G +   FL   G V+TCG NT GQLGH    ++P        E++G+     ++ 
Sbjct: 37  KEVACGGDHCVFLLEDGEVYTCGLNTKGQLGHEREGNQP--------EQIGALADQHIIH 88

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGD 332
           +A G S+ LA++  G ++S+G+GS+  LG     D +  PR IQ   ++ I  ++VS G+
Sbjct: 89  VACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGN 146

Query: 333 EHVVALDSSG 342
            H +AL + G
Sbjct: 147 WHCLALATDG 156


>gi|345795569|ref|XP_535652.3| PREDICTED: E3 ISG15--protein ligase HERC5 [Canis lupus familiaris]
          Length = 1263

 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 111/221 (50%), Gaps = 5/221 (2%)

Query: 99  SVEHSS-DIVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR 156
           S+EH+    +      +QIT G YH+L +S    +F+ G +L G LG G   T   +   
Sbjct: 364 SIEHARFQCILQEKSIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRLFTSIPTPQL 423

Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
           +   S   +VQ+SA + H+  +  SG +++ G N     G   TN   F P L+EAL   
Sbjct: 424 VEHLSGVPLVQISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTNGEDF-PSLIEALDNQ 482

Query: 217 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
             + +  G + T  LT  G V T G+  +GQLGH  T +   P+ +  L     V Q+A 
Sbjct: 483 KVEFLACGGSHTALLTKDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAG-NRVTQVAC 541

Query: 277 GPSYMLA-VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
           G  + LA V+  G V+SFGSG    LG+G  H++L P  ++
Sbjct: 542 GRWHTLAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMK 582



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/175 (32%), Positives = 92/175 (52%), Gaps = 7/175 (4%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDN--SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           ++Q++  + H+  + + G++F  G N       G   T+ P   P+LVE L GVP  Q++
Sbjct: 379 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRLFTSIPT--PQLVEHLSGVPLVQIS 436

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
           AG   +  L++ G++++ G N  GQLG G T     P  I  L+    V  +A G S+  
Sbjct: 437 AGKAHSMALSMSGNIYSWGRNDLGQLGLGHTNGEDFPSLIEALDN-QKVEFLACGGSHTA 495

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +T +G+V++FG+G    LGH    +EL+PR +      G  V +V+ G  H +A
Sbjct: 496 LLTKDGLVFTFGAGKYGQLGHNSTQNELRPRLVTEL--AGNRVTQVACGRWHTLA 548


>gi|340505900|gb|EGR32173.1| regulator of chromosome condensation, putative [Ichthyophthirius
           multifiliis]
          Length = 427

 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 65/227 (28%), Positives = 110/227 (48%), Gaps = 17/227 (7%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G++  +L  N  V+S G+S+ G LG+  E T   +F     P   +++ +   +  +A V
Sbjct: 209 GQFTVVLTENGEVYSFGNSMKGQLGYQSEETG--NFQPKKIPDLQNIINIDCGQQFSAAV 266

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIF--RPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             SG+V+T G+N     G    N+ I+  RP  V    G     ++ G NF   L+  G 
Sbjct: 267 SSSGKVYTWGNNDH---GQLGNNQSIYQARPNQVTGFGGNKIINISCGDNFIAALSNEGK 323

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           + T G    GQLGH +  D   PK I   E+   ++++  G ++   +T N  +Y FG G
Sbjct: 324 LFTWGYGNDGQLGHSNRNDLYAPKQIEFKEK---IIKVDCGGTHTAFLTQNNQLYLFGRG 380

Query: 297 SNFCLGHGEQHD-----ELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           +   LG GE  +        P+ ++ F++  + VV V+ G E+ +A+
Sbjct: 381 NEGQLGIGENIESEAAIRTTPKIVEFFKK--MKVVDVTCGGEYTLAI 425



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 124/266 (46%), Gaps = 32/266 (12%)

Query: 98  QSVEHSSD--IVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETT-QCVSF 154
           Q VE  SD  I++  A N  ++       L  +  V++ G +  G+LGH   T+   +  
Sbjct: 68  QEVEKLSDRNIIKVKA-NKSVSMA-----LSQDGKVYTWGKNKGGILGHYDITSFNMIQP 121

Query: 155 TRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFR----- 206
             +       + Q+S    H A + Q G+++T G+      GH   + +N+   +     
Sbjct: 122 ELVEKLENIQIKQISCGPFHMAAISQDGELYTWGNKDHGKLGHEIQQKSNKVEIKRGNQN 181

Query: 207 ---------PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GDTLDR 256
                    P  V++L G+ CKQV+ G  FT  LT  G V++ G++  GQLG+  +    
Sbjct: 182 YDYAEGSMLPTKVQSLNGIKCKQVSCGGQFTVVLTENGEVYSFGNSMKGQLGYQSEETGN 241

Query: 257 PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
             PK I  L+   +++ I  G  +  AV+ +G VY++G+  +  LG+ +   + +P  + 
Sbjct: 242 FQPKKIPDLQ---NIINIDCGQQFSAAVSSSGKVYTWGNNDHGQLGNNQSIYQARPNQVT 298

Query: 317 TFRRKGIHVVRVSAGDEHVVALDSSG 342
            F   G  ++ +S GD  + AL + G
Sbjct: 299 GF--GGNKIINISCGDNFIAALSNEG 322



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/279 (23%), Positives = 128/279 (45%), Gaps = 33/279 (11%)

Query: 90  WKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNS----SVFSCGSSLCGVLGHG 145
           ++++  F +   ++  +   S   + +T+G +   + +++    +V++ G    G LG  
Sbjct: 3   YQKMYNFFKQKTNTKRLFTAS---LLVTSGFFAQSIFTDTPPQKTVYAWGYGNFGQLGLA 59

Query: 146 PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPI 204
            E  Q  S   +   S  ++++V A+++ +  + Q G+V+T G N     GH D T+  +
Sbjct: 60  NENNQ-YSPQEVEKLSDRNIIKVKANKSVSMALSQDGKVYTWGKNKGGILGHYDITSFNM 118

Query: 205 FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-------------- 250
            +P LVE L+ +  KQ++ G      ++  G ++T G+  HG+LGH              
Sbjct: 119 IQPELVEKLENIQIKQISCGPFHMAAISQDGELYTWGNKDHGKLGHEIQQKSNKVEIKRG 178

Query: 251 GDTLDRPT----PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GE 305
               D       P  +  L  +    Q++ G  + + +T NG VYSFG+     LG+  E
Sbjct: 179 NQNYDYAEGSMLPTKVQSLNGI-KCKQVSCGGQFTVVLTENGEVYSFGNSMKGQLGYQSE 237

Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           +    QP+ I   +    +++ +  G +   A+ SSG V
Sbjct: 238 ETGNFQPKKIPDLQ----NIINIDCGQQFSAAVSSSGKV 272


>gi|350596671|ref|XP_003361480.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like, partial
            [Sus scrofa]
          Length = 2561

 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 72/235 (30%), Positives = 122/235 (51%), Gaps = 10/235 (4%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G  +      T I+      V Q+     
Sbjct: 1642 QVICGQNCTFVIQANGTVLACGEGSYGRLGQG-NSDDLHVLTVISALQGFVVTQLVTSCG 1700

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 1701 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 1759

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
            +T  G + T G+  +G+LG G+T ++  P+ +  LE    + Q+A G ++ LAV+ +G +
Sbjct: 1760 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY-QIGQVACGLNHTLAVSADGSM 1818

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+V
Sbjct: 1819 VWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHV 1871



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 70/225 (31%), Positives = 110/225 (48%), Gaps = 7/225 (3%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 1704 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTS 1762

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHT 239
             G++FT G+      G  +T+     P  V AL+G    QV  GLN T  ++  G  V  
Sbjct: 1763 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 1821

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ +  L  +G + ++A G  + +A+T +G VY+FG     
Sbjct: 1822 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 1880

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             L  G   +  +P+ I      G+ +  V+ G EH +AL S+G V
Sbjct: 1881 GLPEGRARNHNRPQQIPVL--AGVVIEDVAVGAEHTLALASTGDV 1923



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 64/230 (27%), Positives = 105/230 (45%), Gaps = 13/230 (5%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ ++ S+  +F+ G+   G LG G  + + +   R+       + QV+   
Sbjct: 1748 VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 1806

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G +   F  GD      G+         P+ V+ L G+  K+V  G  F+ 
Sbjct: 1807 NHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS---SPQKVDVLCGIGIKKVACGTQFSV 1863

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNG 288
             LT  GHV+T G +    L  G   +   P+ I  L   G V++ +A G  + LA+   G
Sbjct: 1864 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVL--AGVVIEDVAVGAEHTLALASTG 1921

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             VY++GS S   LG G  +   +P  +     +G +V ++SAG  H  A 
Sbjct: 1922 DVYAWGSNSEGQLGLGHTNHVREPTLVTVL--QGKNVRQISAGRCHSAAW 1969



 Score = 57.8 bits (138), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 65/128 (50%), Gaps = 4/128 (3%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE--VGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 1641 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 1700

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H  
Sbjct: 1701 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 1758

Query: 337  ALDSSGYV 344
             + S G +
Sbjct: 1759 VVTSDGKL 1766



 Score = 47.8 bits (112), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 79/180 (43%), Gaps = 11/180 (6%)

Query: 115  QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HTL +S   S V++ G    G LG G  T +  S  +++      + +V+   
Sbjct: 1801 QVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKVDVLCGIGIKKVACGT 1859

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G V+T G +          R+ NRP    + +  L GV  + V  G   T 
Sbjct: 1860 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQIPVLAGVVIEDVAVGAEHTL 1915

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L   G V+  GSN+ GQLG G T     P  +  L+   +V QI+AG  +  A T   V
Sbjct: 1916 ALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQG-KNVRQISAGRCHSAAWTAPPV 1974


>gi|432906474|ref|XP_004077549.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Oryzias
           latipes]
          Length = 1059

 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 72/228 (31%), Positives = 111/228 (48%), Gaps = 6/228 (2%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           ++ G  HTL +++   VFS G    G LG      +C+   R I   S   V QV+    
Sbjct: 89  LSCGESHTLALNDKGQVFSWGLGSDGQLGLN-NFEECIRVPRNIKSLSDVQVAQVACGYW 147

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  + + G +F+ G N     G   T + I  P+ +++L+G+P  Q+ AG   +  LT+
Sbjct: 148 HSLALSKGGHIFSWGQNRYGQLGLGMTGQSISVPQHLQSLQGIPFAQIAAGGAHSFALTL 207

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V   G N  GQLG  DT DR  P  +  L     V+ I+ G  +  A+T  G V++F
Sbjct: 208 SGAVFGWGRNKFGQLGLNDTNDRCFPALLKALRS-QRVIYISCGEDHTAALTKEGGVFTF 266

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           G+G    LGH   + E+ PR +  F   G  V +++ G +H +A   S
Sbjct: 267 GAGGYGQLGHNSTNHEVNPRKV--FELMGNVVTQIACGRQHTLAFTPS 312



 Score = 87.4 bits (215), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 68/228 (29%), Positives = 110/228 (48%), Gaps = 8/228 (3%)

Query: 119 GRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 177
           GR HT  L+ + +V++CG +  G LGH     +      ++   A  +V +S  E+H   
Sbjct: 42  GRRHTAFLLEDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQIIVALSCGESHTLA 98

Query: 178 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
           +   GQVF+ G  S    G  +    I  PR +++L  V   QV  G   +  L+  GH+
Sbjct: 99  LNDKGQVFSWGLGSDGQLGLNNFEECIRVPRNIKSLSDVQVAQVACGYWHSLALSKGGHI 158

Query: 238 HTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            + G N +GQLG G T      P+ +  L+ +    QIAAG ++  A+T +G V+ +G  
Sbjct: 159 FSWGQNRYGQLGLGMTGQSISVPQHLQSLQGI-PFAQIAAGGAHSFALTLSGAVFGWGRN 217

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
               LG  + +D   P  ++  R +   V+ +S G++H  AL   G V
Sbjct: 218 KFGQLGLNDTNDRCFPALLKALRSQ--RVIYISCGEDHTAALTKEGGV 263



 Score = 67.8 bits (164), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 64/213 (30%), Positives = 99/213 (46%), Gaps = 9/213 (4%)

Query: 135 GSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R   F     V  V     H AF+L+ G V+TCG N   
Sbjct: 5   GNASYGQLGLGGIDEEIVVEPRKCEFFHGKRVRDVGCGRRHTAFLLEDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 253
             GH  + +   +P  V AL       ++ G + T  L  +G V + G  + GQLG  + 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQIIVALSCGESHTLALNDKGQVFSWGLGSDGQLGLNNF 121

Query: 254 LD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ- 311
            +    P++I  L +V  V Q+A G  + LA++  G ++S+G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDV-QVAQVACGYWHSLALSKGGHIFSWGQNRYGQLGLGMTGQSISV 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           P+ +Q+   +GI   +++AG  H  AL  SG V
Sbjct: 181 PQHLQSL--QGIPFAQIAAGGAHSFALTLSGAV 211



 Score = 51.2 bits (121), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 44/150 (29%), Positives = 65/150 (43%), Gaps = 4/150 (2%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI  G  H+  ++ S +VF  G +  G LG      +C     +    +  V+ +S  E+
Sbjct: 194 QIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDTNDRCFP-ALLKALRSQRVIYISCGED 252

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFLT 232
           H A + + G VFT G       GH  TN  +  PR V  L G    Q+  G   T  F  
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTNHEV-NPRKVFELMGNVVTQIACGRQHTLAFTP 311

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
             G + + G   +GQLG   T +R +P  +
Sbjct: 312 SSGKMDSFGLGGNGQLGTRSTCNRKSPAPV 341


>gi|417405695|gb|JAA49551.1| Putative e3 ubiquitin-protein ligase herc3 [Desmodus rotundus]
          Length = 1050

 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 110/227 (48%), Gaps = 7/227 (3%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H+V V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIVHVACGESHSLAL 99

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 239 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V
Sbjct: 219 AGQLGLSDEEDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGV 263



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 75/234 (32%), Positives = 113/234 (48%), Gaps = 7/234 (2%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  VHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYV 344
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLI 316



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/189 (30%), Positives = 101/189 (53%), Gaps = 10/189 (5%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N    +P  + AL    
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN----KPEQIGALADQH 85

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 336 VALDSSGYV 344
            AL  SG V
Sbjct: 203 FALSLSGAV 211



 Score = 71.6 bits (174), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 65/195 (33%), Positives = 96/195 (49%), Gaps = 8/195 (4%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++ G +H L L ++   F+ G +  G LG G E     S  R+       + QV+A  
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
            H+  +  SG VF  G N++   G  D  +R    P  V+ L+      ++ G   T  L
Sbjct: 200 AHSFALSLSGAVFGWGMNNAGQLGLSDEEDRE--SPCHVKLLRTQKVVYISCGEEHTAVL 257

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGNGV 289
           T  G V T G+ + GQLGH    D   P+ +  LE +GS V QIA G  + LA V  +G+
Sbjct: 258 TKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGL 315

Query: 290 VYSFGSGSNFCLGHG 304
           +Y+FG G+   LG G
Sbjct: 316 IYAFGCGARGQLGTG 330



 Score = 71.6 bits (174), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 51/165 (30%), Positives = 83/165 (50%), Gaps = 25/165 (15%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           T GQLGH    ++P        E++G+     +V +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 299 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADG 156


>gi|354500120|ref|XP_003512150.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like, partial
           [Cricetulus griseus]
          Length = 631

 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 109/227 (48%), Gaps = 7/227 (3%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H+V V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGVNSKGQLGHEREGNKP---EQIGALADQHIVHVACGESHSLAL 99

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 239 TCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G      T P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQTSPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGV 263



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 76/234 (32%), Positives = 114/234 (48%), Gaps = 7/234 (2%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  VHVACGESHSLALSDRGQLFSWGAGSDGQLGL-MTTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYV 344
           +FG+GS   LGHG  +DE+ PR +      G  V +++ G +H +A + SSG +
Sbjct: 265 TFGAGSCGQLGHGSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLI 316



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/189 (30%), Positives = 101/189 (53%), Gaps = 10/189 (5%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   + +V+   NH+ F+L+ G+V+TCG NS    GH R+ N    +P  + AL    
Sbjct: 30  FVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNSKGQLGHEREGN----KPEQIGALADQH 85

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 336 VALDSSGYV 344
            AL  SG V
Sbjct: 203 FALSLSGAV 211



 Score = 75.1 bits (183), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 65/194 (33%), Positives = 96/194 (49%), Gaps = 6/194 (3%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++ G +H L L ++   F+ G +  G LG G E     S  R+       + QV+A  
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG VF  G N++   G  D  +    P  V+ L+      ++ G   T  LT
Sbjct: 200 AHSFALSLSGAVFGWGMNNAGQLGLSD-EKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGNGVV 290
             G V T G+ + GQLGHG   D   P+ +  LE +GS V QIA G  + LA V  +G++
Sbjct: 259 KSGGVFTFGAGSCGQLGHGSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLI 316

Query: 291 YSFGSGSNFCLGHG 304
           Y+FG G+   LG G
Sbjct: 317 YAFGCGARGQLGTG 330



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 83/165 (50%), Gaps = 25/165 (15%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISSNLRGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVN 61

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           + GQLGH    ++P        E++G+     +V +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  SKGQLGHEREGNKP--------EQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 299 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADG 156


>gi|281344274|gb|EFB19858.1| hypothetical protein PANDA_001437 [Ailuropoda melanoleuca]
          Length = 1050

 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 110/227 (48%), Gaps = 7/227 (3%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H+V V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIVHVACGESHSLAL 99

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 239 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V
Sbjct: 219 AGQLGLSDEEDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGV 263



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 75/234 (32%), Positives = 113/234 (48%), Gaps = 7/234 (2%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  VHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYV 344
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLI 316



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/189 (30%), Positives = 101/189 (53%), Gaps = 10/189 (5%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N    +P  + AL    
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN----KPEQIGALADQH 85

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 336 VALDSSGYV 344
            AL  SG V
Sbjct: 203 FALSLSGAV 211



 Score = 71.6 bits (174), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 65/195 (33%), Positives = 96/195 (49%), Gaps = 8/195 (4%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++ G +H L L ++   F+ G +  G LG G E     S  R+       + QV+A  
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
            H+  +  SG VF  G N++   G  D  +R    P  V+ L+      ++ G   T  L
Sbjct: 200 AHSFALSLSGAVFGWGMNNAGQLGLSDEEDRE--SPCHVKLLRTQKVVYISCGEEHTAVL 257

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGNGV 289
           T  G V T G+ + GQLGH    D   P+ +  LE +GS V QIA G  + LA V  +G+
Sbjct: 258 TKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGL 315

Query: 290 VYSFGSGSNFCLGHG 304
           +Y+FG G+   LG G
Sbjct: 316 IYAFGCGARGQLGTG 330



 Score = 71.6 bits (174), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 51/165 (30%), Positives = 83/165 (50%), Gaps = 25/165 (15%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           T GQLGH    ++P        E++G+     +V +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 299 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADG 156


>gi|242077750|ref|XP_002448811.1| hypothetical protein SORBIDRAFT_06g033680 [Sorghum bicolor]
 gi|241939994|gb|EES13139.1| hypothetical protein SORBIDRAFT_06g033680 [Sorghum bicolor]
          Length = 879

 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 70/240 (29%), Positives = 115/240 (47%), Gaps = 15/240 (6%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           ++ G +HT LI++S  +++ G    GVLGHG   + C     +        + VS    H
Sbjct: 190 VSCGTWHTALITSSGQLYTFGDGTFGVLGHGNRAS-CSYPKEVESLKGLRTISVSCGVWH 248

Query: 175 AAFVLQ---------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            A V++         SG++FT GD   +  GH D +  + +P  + +L      +   G 
Sbjct: 249 TAAVVEVIISQSNASSGKLFTWGDGDKYRLGHGDRSSKL-KPTCIPSLIDYNFHKAACGH 307

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
             T  LT  GH+ T GS+ +GQLG+ +   R  P+ +      G VV++A G  ++  +T
Sbjct: 308 TLTIGLTTSGHIFTVGSSVYGQLGNPNNDGR-YPRLVEEQLGGGGVVEVACGSYHVAVLT 366

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVS 345
             G VY++G G+N  LGHG+  D   P  ++  R + +   RV+ G     A+    +VS
Sbjct: 367 NAGEVYTWGKGANGRLGHGDIADRKVPTLVEALRDRSVK--RVACGSSFTAAICQHKWVS 424



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/177 (32%), Positives = 91/177 (51%), Gaps = 7/177 (3%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  V+    HAA V +  +VFT G+  S   GH  T   +F+PRLVE+L     + +  G
Sbjct: 80  VSYVACGVKHAALVTRQSEVFTWGEECSGRLGH-GTGTNVFQPRLVESLSICNVELIACG 138

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
              T  +T  G ++T G  TH  G LGHG  +    PK ++ PL+ +  V  ++ G  + 
Sbjct: 139 EFHTCAVTATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSGPLDGL-PVSTVSCGTWHT 197

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             +T +G +Y+FG G+   LGHG +     P+ +++   KG+  + VS G  H  A+
Sbjct: 198 ALITSSGQLYTFGDGTFGVLGHGNRASCSYPKEVESL--KGLRTISVSCGVWHTAAV 252



 Score = 74.7 bits (182), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 60/236 (25%), Positives = 105/236 (44%), Gaps = 15/236 (6%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           ++  L+   S VF+ G    G LGHG   T       +   S  +V  ++  E H   V 
Sbjct: 88  KHAALVTRQSEVFTWGEECSGRLGHG-TGTNVFQPRLVESLSICNVELIACGEFHTCAVT 146

Query: 180 QSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
            +G ++T GD  +++   GH          R+   L G+P   V+ G   T  +T  G +
Sbjct: 147 ATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSGPLDGLPVSTVSCGTWHTALITSSGQL 206

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV---------TGNG 288
           +T G  T G LGHG+      PK +  L+ +   + ++ G  +  AV           +G
Sbjct: 207 YTFGDGTFGVLGHGNRASCSYPKEVESLKGL-RTISVSCGVWHTAAVVEVIISQSNASSG 265

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            ++++G G  + LGHG++  +L+P  I +      H  + + G    + L +SG++
Sbjct: 266 KLFTWGDGDKYRLGHGDRSSKLKPTCIPSLIDYNFH--KAACGHTLTIGLTTSGHI 319



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 71/156 (45%), Gaps = 7/156 (4%)

Query: 189 DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 248
           D S++  G   T   +  P+ +E+   +    V  G+     +T +  V T G    G+L
Sbjct: 54  DRSAYSPG---TTTDVLVPKPLESNVMLDVSYVACGVKHAALVTRQSEVFTWGEECSGRL 110

Query: 249 GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQ 306
           GHG   +   P+ +  L  + +V  IA G  +  AVT  G +Y++G G++    LGHG  
Sbjct: 111 GHGTGTNVFQPRLVESL-SICNVELIACGEFHTCAVTATGDLYTWGDGTHNAGLLGHGSN 169

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
                P+ + +    G+ V  VS G  H   + SSG
Sbjct: 170 VSHWIPKRV-SGPLDGLPVSTVSCGTWHTALITSSG 204


>gi|148666329|gb|EDK98745.1| hect domain and RLD 3, isoform CRA_a [Mus musculus]
          Length = 913

 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 109/227 (48%), Gaps = 7/227 (3%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 99

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 239 TCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G      T P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQTSPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGV 263



 Score = 91.3 bits (225), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 76/234 (32%), Positives = 113/234 (48%), Gaps = 7/234 (2%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVF 264

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYV 344
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +AL  SSG +
Sbjct: 265 TFGAGSCGQLGHDSVNDEVNPRRV--LELMGSEVTQIACGRQHTLALVPSSGLI 316



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 57/189 (30%), Positives = 101/189 (53%), Gaps = 10/189 (5%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   + +V+   NH+ F+L+ G+V+TCG N+    GH R+ N    +P  + AL    
Sbjct: 30  FVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGN----KPEQIGALADQH 85

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 336 VALDSSGYV 344
            AL  SG V
Sbjct: 203 FALSLSGAV 211



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 64/194 (32%), Positives = 95/194 (48%), Gaps = 6/194 (3%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++ G +H L L ++   F+ G +  G LG G E     S  R+       + QV+A  
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG VF  G N++   G  D  +    P  V+ L+      ++ G   T  LT
Sbjct: 200 AHSFALSLSGAVFGWGMNNAGQLGLSD-EKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGNGVV 290
             G V T G+ + GQLGH    D   P+ +  LE +GS V QIA G  + LA V  +G++
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSVNDEVNPRRV--LELMGSEVTQIACGRQHTLALVPSSGLI 316

Query: 291 YSFGSGSNFCLGHG 304
           Y+FG G+   LG G
Sbjct: 317 YAFGCGAKGQLGTG 330



 Score = 72.0 bits (175), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 83/165 (50%), Gaps = 25/165 (15%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVN 61

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           T GQLGH    ++P        E++G+     ++ +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 299 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADG 156


>gi|391339113|ref|XP_003743897.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like
            [Metaseiulus occidentalis]
          Length = 4496

 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 75/232 (32%), Positives = 112/232 (48%), Gaps = 7/232 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            + +G  H L L S+  VFS G    G LGHG +   C     I      HVV V+    H
Sbjct: 3711 VNSGGKHCLALTSSGDVFSWGEGDDGKLGHGSKAL-CERPKLIESLRDKHVVSVACGGAH 3769

Query: 175  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI- 233
            +A +  SG+++T G       GH D+   + +P+ VE L G     V  G      L + 
Sbjct: 3770 SACITASGELYTWGKGRYGRLGHGDSEDQL-KPKKVEELAGHNVLDVACGSGDAQTLCVS 3828

Query: 234  -RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V + G   +G+LG G +     P+ I  L+  G V+++  G  + +A+T  GVVY+
Sbjct: 3829 RDGLVWSWGDGDYGKLGRGGSDGCKFPQKIDSLQNAG-VIKVECGSQFSVALTAAGVVYT 3887

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            +G G    LGHG +    +P+A+Q    +G  V++V+ G  H VA   SG V
Sbjct: 3888 WGKGDYHRLGHGSEDHVRRPQAVQG-ALQGKRVIQVAVGSLHCVACTDSGEV 3938



 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 71/231 (30%), Positives = 109/231 (47%), Gaps = 13/231 (5%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA---AHVVQVSASENHA 175
            GR+   L  +  VFS G    G LGHG +    +S+ R     +     +  V+   +H+
Sbjct: 2748 GRHALALTIDGRVFSWGEGEDGKLGHGNK----ISYDRPKLVESLKCKRIRDVACGSSHS 2803

Query: 176  AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTI 233
            A V  SG+++T G       GH D N P  +P+ V AL      QV  G     T  LT 
Sbjct: 2804 AAVTSSGELYTWGSGEYGRLGHGD-NVPQLKPKQVRALSHERVVQVACGSRDAQTLALTE 2862

Query: 234  RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            R  V++ G    G+LG G +     P+++  L     V+Q+  G  + LA++ NG V+++
Sbjct: 2863 RHWVYSWGDGDFGKLGKGGSDGSSLPQNVETLNS-QQVIQVECGAQFSLALSKNGKVWTW 2921

Query: 294  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            G G  F LGHG       P+ ++    K  +V++VS G  H +A+   G V
Sbjct: 2922 GKGDYFRLGHGSDSHVRWPQVVEELADK--NVIQVSVGALHCIAVTDRGEV 2970



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 113/237 (47%), Gaps = 12/237 (5%)

Query: 114  MQITTGRYHTLLIS-NSSVFSCGSSLCGVLG--HGPETTQCVSFTRINFPSAAHVVQVSA 170
            M I  G     ++S +  VF+CG    G LG  H     Q    T ++ P     V V +
Sbjct: 2688 MNIAGGSKSLFIVSHDGKVFACGEGTNGRLGLGHSHNVAQPKPLTDLS-PYFIKKVAVHS 2746

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFTG 229
               HA  +   G+VF+ G+      GH   N+  + RP+LVE+LK    + V  G + + 
Sbjct: 2747 GGRHALALTIDGRVFSWGEGEDGKLGH--GNKISYDRPKLVESLKCKRIRDVACGSSHSA 2804

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG--PSYMLAVTGN 287
             +T  G ++T GS  +G+LGHGD + +  PK +  L     VVQ+A G   +  LA+T  
Sbjct: 2805 AVTSSGELYTWGSGEYGRLGHGDNVPQLKPKQVRALSH-ERVVQVACGSRDAQTLALTER 2863

Query: 288  GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              VYS+G G    LG G       P+ ++T   +   V++V  G +  +AL  +G V
Sbjct: 2864 HWVYSWGDGDFGKLGKGGSDGSSLPQNVETLNSQ--QVIQVECGAQFSLALSKNGKV 2918



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 92/207 (44%), Gaps = 5/207 (2%)

Query: 140  GVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRD 199
            G LG G E  +  + T  +  +A   VQ+   E     +   G+V+  G  +    G   
Sbjct: 3630 GQLG-GVEGAKVKTATICDALTALRPVQIVGGEQTLFALTSDGKVYATGYGAGGRLGIGG 3688

Query: 200  TNRPIFRPRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP 257
            T   +  P L+E L+ V   QV   +G      LT  G V + G    G+LGHG      
Sbjct: 3689 TES-VSTPTLIETLQHVIVTQVAVNSGGKHCLALTSSGDVFSWGEGDDGKLGHGSKALCE 3747

Query: 258  TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQT 317
             PK I  L +   VV +A G ++   +T +G +Y++G G    LGHG+  D+L+P+ ++ 
Sbjct: 3748 RPKLIESLRD-KHVVSVACGGAHSACITASGELYTWGKGRYGRLGHGDSEDQLKPKKVEE 3806

Query: 318  FRRKGIHVVRVSAGDEHVVALDSSGYV 344
                 +  V   +GD   + +   G V
Sbjct: 3807 LAGHNVLDVACGSGDAQTLCVSRDGLV 3833



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 55/225 (24%), Positives = 105/225 (46%), Gaps = 6/225 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF- 177
            G +   + ++  +++ G    G LGHG    Q +   ++   +  +V+ V+     A   
Sbjct: 3767 GAHSACITASGELYTWGKGRYGRLGHGDSEDQ-LKPKKVEELAGHNVLDVACGSGDAQTL 3825

Query: 178  -VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             V + G V++ GD      G   ++   F P+ +++L+     +V  G  F+  LT  G 
Sbjct: 3826 CVSRDGLVWSWGDGDYGKLGRGGSDGCKF-PQKIDSLQNAGVIKVECGSQFSVALTAAGV 3884

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V+T G   + +LGHG       P+++    +   V+Q+A G  + +A T +G V+++G  
Sbjct: 3885 VYTWGKGDYHRLGHGSEDHVRRPQAVQGALQGKRVIQVAVGSLHCVACTDSGEVFTWGDN 3944

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
                LG G  +   +P+ + +   KG  + RV+ G  H V+  +S
Sbjct: 3945 DEGQLGDGSTNAIQRPKLVASL--KGKKMNRVACGSAHTVSWSTS 3987



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/230 (26%), Positives = 103/230 (44%), Gaps = 10/230 (4%)

Query: 116  ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            +  G  H+  +++S  +++ GS   G LGHG    Q +   ++   S   VVQV+     
Sbjct: 2796 VACGSSHSAAVTSSGELYTWGSGEYGRLGHGDNVPQ-LKPKQVRALSHERVVQVACGSRD 2854

Query: 175  AAFVLQSGQ--VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A  +  + +  V++ GD      G   ++     P+ VE L      QV  G  F+  L+
Sbjct: 2855 AQTLALTERHWVYSWGDGDFGKLGKGGSDGSSL-PQNVETLNSQQVIQVECGAQFSLALS 2913

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG       P+ +  L +  +V+Q++ G  + +AVT  G VY+
Sbjct: 2914 KNGKVWTWGKGDYFRLGHGSDSHVRWPQVVEELAD-KNVIQVSVGALHCIAVTDRGEVYA 2972

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            +G   +   G+G      +P  ++        +  V+ G  H VA  S+G
Sbjct: 2973 WGDNDHGQQGNGNTTVNRKPAIVRGLE----AITNVACGSSHSVAWSSTG 3018



 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 76/161 (47%), Gaps = 4/161 (2%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P+  E +  +    +  G      ++  G V  CG 
Sbjct: 2653 KVFVWGLNDKDQLGGLKGSK-IKEPKFSEVISNLKPMNIAGGSKSLFIVSHDGKVFACGE 2711

Query: 243  NTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 301
             T+G+LG G + +   PK +  L       V + +G  + LA+T +G V+S+G G +  L
Sbjct: 2712 GTNGRLGLGHSHNVAQPKPLTDLSPYFIKKVAVHSGGRHALALTIDGRVFSWGEGEDGKL 2771

Query: 302  GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            GHG +    +P+ +++ + K I    V+ G  H  A+ SSG
Sbjct: 2772 GHGNKISYDRPKLVESLKCKRIR--DVACGSSHSAAVTSSG 2810


>gi|443704116|gb|ELU01328.1| hypothetical protein CAPTEDRAFT_228560 [Capitella teleta]
          Length = 1874

 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 71/235 (30%), Positives = 118/235 (50%), Gaps = 10/235 (4%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS-- 171
            QI  G+  T +I +N +V +CG    G LG G  +    S T ++      V Q+  S  
Sbjct: 1025 QIICGQNCTFVIQANGTVLACGEGSYGRLGQG-NSDDLHSLTIVSALQGFVVTQLVTSVG 1083

Query: 172  -ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
             + H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q+  G   +  
Sbjct: 1084 SDGHSLALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVIQIACGFKHSAV 1142

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
            +T+ G + T G+  +G+LG G   +R TP+ +  LE    +  +A G ++ + V+ +G  
Sbjct: 1143 VTVDGKLLTFGNGDYGRLGLGTVCNRKTPERVKALENY-HIGHVACGLNHTVCVSADGST 1201

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             ++FG G    LG G    +  P  I+     G+ V +V+ G +  VAL   G+V
Sbjct: 1202 TWAFGDGDYGKLGLGNTSAKSTPVKIEAL--SGLKVKKVACGTQFSVALTRDGFV 1254



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 66/125 (52%), Gaps = 6/125 (4%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +Q+  G N T  +   G V  CG  ++G+LG G++ D  +   ++ L+   V  +V    
Sbjct: 1024 QQIICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHSLTIVSALQGFVVTQLVTSVG 1083

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH-- 334
               + LA+T +G V+S+G G    LGHG    + +PR I+    +G  V++++ G +H  
Sbjct: 1084 SDGHSLALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVIQIACGFKHSA 1141

Query: 335  VVALD 339
            VV +D
Sbjct: 1142 VVTVD 1146



 Score = 41.2 bits (95), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 48/178 (26%), Positives = 72/178 (40%), Gaps = 14/178 (7%)

Query: 116  ITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCV-----SFTRINFPSAAHVVQV 168
            +  G  HT+ +S   S+ ++ G    G LG G  + +       + + +     A   Q 
Sbjct: 1185 VACGLNHTVCVSADGSTTWAFGDGDYGKLGLGNTSAKSTPVKIEALSGLKVKKVACGTQF 1244

Query: 169  SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
            S +     FVL  GQ    G   +   GH         P+ V  L G   ++V  G   T
Sbjct: 1245 SVALTRDGFVLTWGQDRLIGQTEAQMRGH-------CTPQKVTTLAGHFIEEVVVGSEHT 1297

Query: 229  GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
              LT  G+V   G N  GQLG G T     P+ +  L     + QI+AG ++  A +G
Sbjct: 1298 LALTSDGNVWGWGLNADGQLGLGHTGTVREPQLLGGLGSSEPIKQISAGRTHSAAWSG 1355


>gi|395834129|ref|XP_003790065.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Otolemur
           garnettii]
          Length = 1050

 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 76/234 (32%), Positives = 113/234 (48%), Gaps = 7/234 (2%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDRGQLFSWGAGSDGQLGL-TTTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T NG V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKNGGVF 264

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYV 344
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLI 316



 Score = 90.1 bits (222), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 108/225 (48%), Gaps = 7/225 (3%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+    V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEGGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 99

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLTTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 239 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
              LG  ++ D   P  ++  R +   VV +S G+EH   L  +G
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKNG 261



 Score = 75.5 bits (184), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/189 (30%), Positives = 101/189 (53%), Gaps = 10/189 (5%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N    +P  + AL    
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEGGEVYTCGLNTKGQLGHEREGN----KPEQIGALADQH 85

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLTTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 336 VALDSSGYV 344
            AL  SG V
Sbjct: 203 FALSLSGAV 211



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 64/194 (32%), Positives = 95/194 (48%), Gaps = 6/194 (3%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++ G +H L L ++   F+ G +  G LG G E     S  R+       + QV+A  
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG VF  G N++   G  D  +    P  V+ L+      ++ G   T  LT
Sbjct: 200 AHSFALSLSGAVFGWGMNNAGQLGLSD-EKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGNGVV 290
             G V T G+ + GQLGH    D   P+ +  LE +GS V QIA G  + LA V  +G++
Sbjct: 259 KNGGVFTFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLI 316

Query: 291 YSFGSGSNFCLGHG 304
           Y+FG G+   LG G
Sbjct: 317 YAFGCGARGQLGTG 330



 Score = 70.9 bits (172), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 83/165 (50%), Gaps = 25/165 (15%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEGGEVYTCGLN 61

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           T GQLGH    ++P        E++G+     ++ +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 299 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G
Sbjct: 114 GQLGLTTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADG 156


>gi|301113129|ref|XP_002998335.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262112629|gb|EEY70681.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 2353

 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/216 (31%), Positives = 99/216 (45%), Gaps = 9/216 (4%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
           V+SCG +  G LGHG +T    SF RI       ++Q+ A   H   +   G+VFTCG N
Sbjct: 564 VWSCGQNSYGELGHG-DTASRKSFERIQALQQKEIIQIGAGNEHTVVLTADGKVFTCGYN 622

Query: 191 SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH 250
            +  CG   T R      + +   G        G   T  ++  G V TCG N  GQLGH
Sbjct: 623 DNGQCGQGGTARVSHLSEIPKMDSGSSQAHAYNGCEHTILVSTDGRVATCGYNYRGQLGH 682

Query: 251 GDTLDRPTPKSIAPLEEVGSVVQIAAGPSY--MLAVTGNGV--VYSFGSGSNFCLGHGEQ 306
           G+T     PK I  LE    +V++ +   Y  +LA     +  +Y+FG      LGH + 
Sbjct: 683 GNTTSESVPKIIRSLE--NKIVRLVSCSYYHTVLACEDGNLQNLYTFGRNDYGQLGHNDS 740

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            D   P+ ++    +   +V V+ G  H + + +SG
Sbjct: 741 IDRKIPQFVEALSDQ--QIVSVACGQYHTMVVTASG 774



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 75/268 (27%), Positives = 122/268 (45%), Gaps = 32/268 (11%)

Query: 100 VEHSSDIVETSAGNMQI--TTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTR 156
           V H S+I +  +G+ Q     G  HT+L+S +  V +CG +  G LGHG  T++ V   +
Sbjct: 635 VSHLSEIPKMDSGSSQAHAYNGCEHTILVSTDGRVATCGYNYRGQLGHGNTTSESVP--K 692

Query: 157 INFPSAAHVVQ-VSASENHAAFVLQSG---QVFTCGDNSSFCCGHRDT-NRPIFRPRLVE 211
           I       +V+ VS S  H     + G    ++T G N     GH D+ +R I  P+ VE
Sbjct: 693 IIRSLENKIVRLVSCSYYHTVLACEDGNLQNLYTFGRNDYGQLGHNDSIDRKI--PQFVE 750

Query: 212 ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV 271
           AL       V  G   T  +T  G     G N +GQLG  DT++      +AP++  G +
Sbjct: 751 ALSDQQIVSVACGQYHTMVVTASGKAFAFGKNDYGQLGI-DTME----NQLAPVQVRGGL 805

Query: 272 -----VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD------ELQPRAIQTFR- 319
                ++I  G  + +A+     +++FG      LG G  +       +LQ +     R 
Sbjct: 806 ERQECLEIRCGYYHTIALCSGAHLFAFGRNDYGQLGLGRSNASSTSNLQLQQQRFSNARL 865

Query: 320 ---RKGIHVVRVSAGDEHVVALDSSGYV 344
               +G  +VR++ G  H +A+  +G +
Sbjct: 866 IDELEGKDIVRIACGCYHTIAVSDNGVM 893



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 68/148 (45%), Gaps = 3/148 (2%)

Query: 183 QVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 241
           +V++CG NS    GH DT +R  F    ++AL+     Q+ AG   T  LT  G V TCG
Sbjct: 563 EVWSCGQNSYGELGHGDTASRKSFE--RIQALQQKEIIQIGAGNEHTVVLTADGKVFTCG 620

Query: 242 SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 301
            N +GQ G G T        I  ++   S      G  + + V+ +G V + G      L
Sbjct: 621 YNDNGQCGQGGTARVSHLSEIPKMDSGSSQAHAYNGCEHTILVSTDGRVATCGYNYRGQL 680

Query: 302 GHGEQHDELQPRAIQTFRRKGIHVVRVS 329
           GHG    E  P+ I++   K + +V  S
Sbjct: 681 GHGNTTSESVPKIIRSLENKIVRLVSCS 708



 Score = 42.4 bits (98), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 81/192 (42%), Gaps = 31/192 (16%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLG--------------HGPETTQCVS-----FT 155
           +  G+YHT++++ S   F+ G +  G LG               G E  +C+      + 
Sbjct: 760 VACGQYHTMVVTASGKAFAFGKNDYGQLGIDTMENQLAPVQVRGGLERQECLEIRCGYYH 819

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
            I   S AH+     ++         GQ+     N+S     +   +     RL++ L+G
Sbjct: 820 TIALCSGAHLFAFGRND--------YGQLGLGRSNASSTSNLQLQQQRFSNARLIDELEG 871

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQI 274
               ++  G   T  ++  G ++  G N HGQLG GDT +R  P  I     VG  V  +
Sbjct: 872 KDIVRIACGCYHTIAVSDNGVMYVFGRNNHGQLGTGDTTERVYPFPIDDF--VGKRVALV 929

Query: 275 AAGPSYMLAVTG 286
           AAG  + + +TG
Sbjct: 930 AAGFYHTVVLTG 941


>gi|149033226|gb|EDL88027.1| hect domain and RLD 3 (predicted), isoform CRA_b [Rattus
           norvegicus]
          Length = 909

 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 109/227 (48%), Gaps = 7/227 (3%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 99

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 239 TCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G      T P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQTSPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGV 263



 Score = 90.9 bits (224), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 76/234 (32%), Positives = 113/234 (48%), Gaps = 7/234 (2%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVF 264

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYV 344
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +AL  SSG +
Sbjct: 265 TFGAGSCGQLGHDSVNDEVNPRRV--LELMGSEVTQIACGRQHTLALVPSSGLI 316



 Score = 75.5 bits (184), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 57/189 (30%), Positives = 101/189 (53%), Gaps = 10/189 (5%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   + +V+   NH+ F+L+ G+V+TCG N+    GH R+ N    +P  + AL    
Sbjct: 30  FVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGN----KPEQIGALADQH 85

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 336 VALDSSGYV 344
            AL  SG V
Sbjct: 203 FALSLSGAV 211



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 64/194 (32%), Positives = 95/194 (48%), Gaps = 6/194 (3%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++ G +H L L ++   F+ G +  G LG G E     S  R+       + QV+A  
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG VF  G N++   G  D  +    P  V+ L+      ++ G   T  LT
Sbjct: 200 AHSFALSLSGAVFGWGMNNAGQLGLSD-EKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGNGVV 290
             G V T G+ + GQLGH    D   P+ +  LE +GS V QIA G  + LA V  +G++
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSVNDEVNPRRV--LELMGSEVTQIACGRQHTLALVPSSGLI 316

Query: 291 YSFGSGSNFCLGHG 304
           Y+FG G+   LG G
Sbjct: 317 YAFGCGAKGQLGTG 330



 Score = 72.0 bits (175), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 83/165 (50%), Gaps = 25/165 (15%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVN 61

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           T GQLGH    ++P        E++G+     ++ +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 299 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADG 156


>gi|12856817|dbj|BAB30794.1| unnamed protein product [Mus musculus]
          Length = 913

 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 109/227 (48%), Gaps = 7/227 (3%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 99

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 239 TCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G      T P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQTSPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGV 263



 Score = 90.9 bits (224), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 76/234 (32%), Positives = 113/234 (48%), Gaps = 7/234 (2%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVF 264

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYV 344
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +AL  SSG +
Sbjct: 265 TFGAGSCGQLGHDSVNDEVNPRRV--LELMGSEVTQIACGRQHTLALVPSSGLI 316



 Score = 75.5 bits (184), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 57/189 (30%), Positives = 101/189 (53%), Gaps = 10/189 (5%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   + +V+   NH+ F+L+ G+V+TCG N+    GH R+ N    +P  + AL    
Sbjct: 30  FVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGN----KPEQIGALADQH 85

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 336 VALDSSGYV 344
            AL  SG V
Sbjct: 203 FALSLSGAV 211



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 64/194 (32%), Positives = 95/194 (48%), Gaps = 6/194 (3%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++ G +H L L ++   F+ G +  G LG G E     S  R+       + QV+A  
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG VF  G N++   G  D  +    P  V+ L+      ++ G   T  LT
Sbjct: 200 AHSFALSLSGAVFGWGMNNAGQLGLSD-EKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGNGVV 290
             G V T G+ + GQLGH    D   P+ +  LE +GS V QIA G  + LA V  +G++
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSVNDEVNPRRV--LELMGSEVTQIACGRQHTLALVPSSGLI 316

Query: 291 YSFGSGSNFCLGHG 304
           Y+FG G+   LG G
Sbjct: 317 YAFGCGAKGQLGTG 330



 Score = 72.0 bits (175), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 83/165 (50%), Gaps = 25/165 (15%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVN 61

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           T GQLGH    ++P        E++G+     ++ +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 299 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADG 156


>gi|27503689|gb|AAH42574.1| Hect domain and RLD 3 [Mus musculus]
          Length = 1050

 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 109/227 (48%), Gaps = 7/227 (3%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 99

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 239 TCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G      T P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQTSPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGV 263



 Score = 90.9 bits (224), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 76/234 (32%), Positives = 113/234 (48%), Gaps = 7/234 (2%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYV 344
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +AL  SSG +
Sbjct: 265 TFGAGSCGQLGHDSVNDEVNPRRV--LELMGSEVTQIACGRQHTLALVPSSGLI 316



 Score = 75.5 bits (184), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 57/189 (30%), Positives = 101/189 (53%), Gaps = 10/189 (5%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   + +V+   NH+ F+L+ G+V+TCG N+    GH R+ N    +P  + AL    
Sbjct: 30  FVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGN----KPEQIGALADQH 85

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 336 VALDSSGYV 344
            AL  SG V
Sbjct: 203 FALSLSGAV 211



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 64/194 (32%), Positives = 95/194 (48%), Gaps = 6/194 (3%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++ G +H L L ++   F+ G +  G LG G E     S  R+       + QV+A  
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG VF  G N++   G  D  +    P  V+ L+      ++ G   T  LT
Sbjct: 200 AHSFALSLSGAVFGWGMNNAGQLGLSD-EKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGNGVV 290
             G V T G+ + GQLGH    D   P+ +  LE +GS V QIA G  + LA V  +G++
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSVNDEVNPRRV--LELMGSEVTQIACGRQHTLALVPSSGLI 316

Query: 291 YSFGSGSNFCLGHG 304
           Y+FG G+   LG G
Sbjct: 317 YAFGCGAKGQLGTG 330



 Score = 72.0 bits (175), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 83/165 (50%), Gaps = 25/165 (15%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVN 61

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           T GQLGH    ++P        E++G+     ++ +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 299 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADG 156


>gi|157820833|ref|NP_001102101.1| probable E3 ubiquitin-protein ligase HERC3 [Rattus norvegicus]
 gi|149033223|gb|EDL88024.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
           norvegicus]
 gi|149033224|gb|EDL88025.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
           norvegicus]
 gi|149033225|gb|EDL88026.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
           norvegicus]
          Length = 1050

 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 109/227 (48%), Gaps = 7/227 (3%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 99

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 239 TCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G      T P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQTSPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGV 263



 Score = 90.9 bits (224), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 76/234 (32%), Positives = 113/234 (48%), Gaps = 7/234 (2%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYV 344
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +AL  SSG +
Sbjct: 265 TFGAGSCGQLGHDSVNDEVNPRRV--LELMGSEVTQIACGRQHTLALVPSSGLI 316



 Score = 75.5 bits (184), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 57/189 (30%), Positives = 101/189 (53%), Gaps = 10/189 (5%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   + +V+   NH+ F+L+ G+V+TCG N+    GH R+ N    +P  + AL    
Sbjct: 30  FVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGN----KPEQIGALADQH 85

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 336 VALDSSGYV 344
            AL  SG V
Sbjct: 203 FALSLSGAV 211



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 64/194 (32%), Positives = 95/194 (48%), Gaps = 6/194 (3%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++ G +H L L ++   F+ G +  G LG G E     S  R+       + QV+A  
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG VF  G N++   G  D  +    P  V+ L+      ++ G   T  LT
Sbjct: 200 AHSFALSLSGAVFGWGMNNAGQLGLSD-EKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGNGVV 290
             G V T G+ + GQLGH    D   P+ +  LE +GS V QIA G  + LA V  +G++
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSVNDEVNPRRV--LELMGSEVTQIACGRQHTLALVPSSGLI 316

Query: 291 YSFGSGSNFCLGHG 304
           Y+FG G+   LG G
Sbjct: 317 YAFGCGAKGQLGTG 330



 Score = 72.0 bits (175), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 83/165 (50%), Gaps = 25/165 (15%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVN 61

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           T GQLGH    ++P        E++G+     ++ +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 299 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADG 156


>gi|188035869|ref|NP_082981.3| hect domain and RLD 3 [Mus musculus]
 gi|148666330|gb|EDK98746.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
 gi|148666331|gb|EDK98747.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
 gi|148666332|gb|EDK98748.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
 gi|148877724|gb|AAI45981.1| Hect domain and RLD 3 [Mus musculus]
 gi|148877951|gb|AAI45979.1| Hect domain and RLD 3 [Mus musculus]
          Length = 1050

 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 109/227 (48%), Gaps = 7/227 (3%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 99

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 239 TCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G      T P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQTSPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGV 263



 Score = 90.9 bits (224), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 76/234 (32%), Positives = 113/234 (48%), Gaps = 7/234 (2%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYV 344
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +AL  SSG +
Sbjct: 265 TFGAGSCGQLGHDSVNDEVNPRRV--LELMGSEVTQIACGRQHTLALVPSSGLI 316



 Score = 75.5 bits (184), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 57/189 (30%), Positives = 101/189 (53%), Gaps = 10/189 (5%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   + +V+   NH+ F+L+ G+V+TCG N+    GH R+ N    +P  + AL    
Sbjct: 30  FVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGN----KPEQIGALADQH 85

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 336 VALDSSGYV 344
            AL  SG V
Sbjct: 203 FALSLSGAV 211



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 64/194 (32%), Positives = 95/194 (48%), Gaps = 6/194 (3%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++ G +H L L ++   F+ G +  G LG G E     S  R+       + QV+A  
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG VF  G N++   G  D  +    P  V+ L+      ++ G   T  LT
Sbjct: 200 AHSFALSLSGAVFGWGMNNAGQLGLSD-EKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGNGVV 290
             G V T G+ + GQLGH    D   P+ +  LE +GS V QIA G  + LA V  +G++
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSVNDEVNPRRV--LELMGSEVTQIACGRQHTLALVPSSGLI 316

Query: 291 YSFGSGSNFCLGHG 304
           Y+FG G+   LG G
Sbjct: 317 YAFGCGAKGQLGTG 330



 Score = 72.0 bits (175), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 83/165 (50%), Gaps = 25/165 (15%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVN 61

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           T GQLGH    ++P        E++G+     ++ +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 299 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADG 156


>gi|444729789|gb|ELW70193.1| putative E3 ubiquitin-protein ligase HERC3 [Tupaia chinensis]
          Length = 983

 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 110/227 (48%), Gaps = 7/227 (3%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 99

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 239 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGV 263



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 75/234 (32%), Positives = 113/234 (48%), Gaps = 7/234 (2%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDQGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYV 344
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLI 316



 Score = 72.4 bits (176), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 64/194 (32%), Positives = 95/194 (48%), Gaps = 6/194 (3%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++ G +H L L ++   F+ G +  G LG G E     S  R+       + QV+A  
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG VF  G N++   G  D  +    P  V+ L+      ++ G   T  LT
Sbjct: 200 AHSFALSLSGAVFGWGMNNAGQLGLSD-EKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGNGVV 290
             G V T G+ + GQLGH    D   P+ +  LE +GS V QIA G  + LA V  +G++
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLI 316

Query: 291 YSFGSGSNFCLGHG 304
           Y+FG G+   LG G
Sbjct: 317 YAFGCGARGQLGTG 330



 Score = 71.2 bits (173), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 83/165 (50%), Gaps = 25/165 (15%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           T GQLGH    ++P        E++G+     ++ +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIIHVACGESHSLALSDQGQLFSWGAGSD 113

Query: 299 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADG 156


>gi|296196017|ref|XP_002745644.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
           [Callithrix jacchus]
          Length = 1050

 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 110/227 (48%), Gaps = 7/227 (3%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 99

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 239 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGV 263



 Score = 90.9 bits (224), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 75/234 (32%), Positives = 113/234 (48%), Gaps = 7/234 (2%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYV 344
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLI 316



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/189 (30%), Positives = 101/189 (53%), Gaps = 10/189 (5%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N    +P  + AL    
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN----KPEQIGALADQH 85

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 336 VALDSSGYV 344
            AL  SG V
Sbjct: 203 FALSLSGAV 211



 Score = 72.4 bits (176), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 64/194 (32%), Positives = 95/194 (48%), Gaps = 6/194 (3%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++ G +H L L ++   F+ G +  G LG G E     S  R+       + QV+A  
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG VF  G N++   G  D  +    P  V+ L+      ++ G   T  LT
Sbjct: 200 AHSFALSLSGAVFGWGMNNAGQLGLSD-EKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGNGVV 290
             G V T G+ + GQLGH    D   P+ +  LE +GS V QIA G  + LA V  +G++
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLI 316

Query: 291 YSFGSGSNFCLGHG 304
           Y+FG G+   LG G
Sbjct: 317 YAFGCGARGQLGTG 330



 Score = 71.2 bits (173), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 83/165 (50%), Gaps = 25/165 (15%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           T GQLGH    ++P        E++G+     ++ +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 299 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADG 156


>gi|345795744|ref|XP_535653.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Canis lupus
           familiaris]
          Length = 1050

 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 109/225 (48%), Gaps = 7/225 (3%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H+V V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIVHVACGESHSLAL 99

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 239 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEYPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG
Sbjct: 219 AGQLGLSDEEDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSG 261



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 75/234 (32%), Positives = 113/234 (48%), Gaps = 7/234 (2%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  VHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEYPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYV 344
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLI 316



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/189 (30%), Positives = 102/189 (53%), Gaps = 10/189 (5%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N    +P  + AL    
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN----KPEQIGALADQH 85

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + LA+  +G  +++G  S+  LG G+++  +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEYPSQASPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 336 VALDSSGYV 344
            AL  SG V
Sbjct: 203 FALSLSGAV 211



 Score = 72.4 bits (176), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 65/195 (33%), Positives = 96/195 (49%), Gaps = 8/195 (4%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++ G +H L L ++   F+ G +  G LG G E     S  R+       + QV+A  
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEYPSQASPQRVRSLEGIPLAQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
            H+  +  SG VF  G N++   G  D  +R    P  V+ L+      ++ G   T  L
Sbjct: 200 AHSFALSLSGAVFGWGMNNAGQLGLSDEEDRE--SPCHVKLLRTQKVVYISCGEEHTAVL 257

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGNGV 289
           T  G V T G+ + GQLGH    D   P+ +  LE +GS V QIA G  + LA V  +G+
Sbjct: 258 TKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGL 315

Query: 290 VYSFGSGSNFCLGHG 304
           +Y+FG G+   LG G
Sbjct: 316 IYAFGCGAKGQLGTG 330



 Score = 71.6 bits (174), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 51/165 (30%), Positives = 83/165 (50%), Gaps = 25/165 (15%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           T GQLGH    ++P        E++G+     +V +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 299 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADG 156


>gi|301121999|ref|XP_002908726.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262099488|gb|EEY57540.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 2298

 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/216 (31%), Positives = 98/216 (45%), Gaps = 9/216 (4%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
           V+SCG +  G LGHG +T    SF RI       ++Q+ A   H   +   G+VFTCG N
Sbjct: 375 VWSCGQNSYGELGHG-DTASRKSFERIQALQQKEIIQIGAGNEHTVVLTADGKVFTCGYN 433

Query: 191 SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH 250
            +  CG   T R      + +   G        G   T  ++  G V TCG N  GQLGH
Sbjct: 434 DNGQCGQGGTARVSHLSEIPKMDSGSSQAHAYNGCEHTILVSTDGRVATCGYNYRGQLGH 493

Query: 251 GDTLDRPTPKSIAPLEEVGSVVQIAAGPSY--MLAVTGNGV--VYSFGSGSNFCLGHGEQ 306
           G+T     PK I  LE    +V++ +   Y  +LA     +  +Y+FG      LGH + 
Sbjct: 494 GNTTSESVPKIIRSLE--NKIVRLVSCSYYHTVLACEDGNLQNLYTFGRNDYGQLGHNDS 551

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            D   P+ ++    +   +V V+ G  H + +  SG
Sbjct: 552 IDRKIPQFVEALSDQ--QIVSVACGQYHTMVVTVSG 585



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 72/261 (27%), Positives = 116/261 (44%), Gaps = 22/261 (8%)

Query: 100 VEHSSDIVETSAGNMQI--TTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTR 156
           V H S+I +  +G+ Q     G  HT+L+S +  V +CG +  G LGHG  T++ V   +
Sbjct: 446 VSHLSEIPKMDSGSSQAHAYNGCEHTILVSTDGRVATCGYNYRGQLGHGNTTSESVP--K 503

Query: 157 INFPSAAHVVQ-VSASENHAAFVLQSG---QVFTCGDNSSFCCGHRDT-NRPIFRPRLVE 211
           I       +V+ VS S  H     + G    ++T G N     GH D+ +R I  P+ VE
Sbjct: 504 IIRSLENKIVRLVSCSYYHTVLACEDGNLQNLYTFGRNDYGQLGHNDSIDRKI--PQFVE 561

Query: 212 ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV 271
           AL       V  G   T  +T+ G     G N +GQLG     ++  P  +    E    
Sbjct: 562 ALSDQQIVSVACGQYHTMVVTVSGKAFAFGKNDYGQLGIDTMENQLAPVQVRGGLERQEC 621

Query: 272 VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD------ELQPRAIQTFR----RK 321
           ++I  G  + +A+     +++FG      LG G  +       +LQ +     R     +
Sbjct: 622 LEIRCGYYHTIALCSGAHLFAFGRNDYGQLGLGRSNASSTSNLQLQQQRFSNARLIDELE 681

Query: 322 GIHVVRVSAGDEHVVALDSSG 342
           G  +VR++ G  H +A+  +G
Sbjct: 682 GKDIVRIACGCYHTIAVSDNG 702



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 68/148 (45%), Gaps = 3/148 (2%)

Query: 183 QVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 241
           +V++CG NS    GH DT +R  F    ++AL+     Q+ AG   T  LT  G V TCG
Sbjct: 374 EVWSCGQNSYGELGHGDTASRKSFER--IQALQQKEIIQIGAGNEHTVVLTADGKVFTCG 431

Query: 242 SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 301
            N +GQ G G T        I  ++   S      G  + + V+ +G V + G      L
Sbjct: 432 YNDNGQCGQGGTARVSHLSEIPKMDSGSSQAHAYNGCEHTILVSTDGRVATCGYNYRGQL 491

Query: 302 GHGEQHDELQPRAIQTFRRKGIHVVRVS 329
           GHG    E  P+ I++   K + +V  S
Sbjct: 492 GHGNTTSESVPKIIRSLENKIVRLVSCS 519



 Score = 42.4 bits (98), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 48/193 (24%), Positives = 84/193 (43%), Gaps = 33/193 (17%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLG--------------HGPETTQCVS-----FT 155
           +  G+YHT++++ S   F+ G +  G LG               G E  +C+      + 
Sbjct: 571 VACGQYHTMVVTVSGKAFAFGKNDYGQLGIDTMENQLAPVQVRGGLERQECLEIRCGYYH 630

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
            I   S AH+     ++         GQ+     N+S     +   +     RL++ L+G
Sbjct: 631 TIALCSGAHLFAFGRND--------YGQLGLGRSNASSTSNLQLQQQRFSNARLIDELEG 682

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE-VGS-VVQ 273
               ++  G   T  ++  G ++  G N HGQLG GDT +R  P    P+++ VG  +  
Sbjct: 683 KDIVRIACGCYHTIAVSDNGVMYVFGRNNHGQLGTGDTTERVYP---FPIDDFVGKRIAL 739

Query: 274 IAAGPSYMLAVTG 286
           +AAG  + + +TG
Sbjct: 740 VAAGFYHTVVLTG 752


>gi|402869928|ref|XP_003898995.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
           [Papio anubis]
          Length = 1050

 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 110/227 (48%), Gaps = 7/227 (3%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 99

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 239 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGV 263



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 75/234 (32%), Positives = 113/234 (48%), Gaps = 7/234 (2%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYV 344
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLI 316



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/189 (30%), Positives = 101/189 (53%), Gaps = 10/189 (5%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N    +P  + AL    
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN----KPEQIGALADQH 85

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 336 VALDSSGYV 344
            AL  SG V
Sbjct: 203 FALSLSGAV 211



 Score = 72.4 bits (176), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 64/194 (32%), Positives = 95/194 (48%), Gaps = 6/194 (3%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++ G +H L L ++   F+ G +  G LG G E     S  R+       + QV+A  
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG VF  G N++   G  D  +    P  V+ L+      ++ G   T  LT
Sbjct: 200 AHSFALSLSGAVFGWGMNNAGQLGLSD-EKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGNGVV 290
             G V T G+ + GQLGH    D   P+ +  LE +GS V QIA G  + LA V  +G++
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLI 316

Query: 291 YSFGSGSNFCLGHG 304
           Y+FG G+   LG G
Sbjct: 317 YAFGCGARGQLGTG 330



 Score = 71.2 bits (173), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 83/165 (50%), Gaps = 25/165 (15%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           T GQLGH    ++P        E++G+     ++ +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 299 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADG 156


>gi|332233510|ref|XP_003265945.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
           [Nomascus leucogenys]
          Length = 1050

 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 110/227 (48%), Gaps = 7/227 (3%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 99

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 239 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGV 263



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 75/234 (32%), Positives = 113/234 (48%), Gaps = 7/234 (2%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYV 344
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLI 316



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/189 (30%), Positives = 101/189 (53%), Gaps = 10/189 (5%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N    +P  + AL    
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN----KPEQIGALADQH 85

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 336 VALDSSGYV 344
            AL  SG V
Sbjct: 203 FALSLSGAV 211



 Score = 72.4 bits (176), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 64/194 (32%), Positives = 95/194 (48%), Gaps = 6/194 (3%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++ G +H L L ++   F+ G +  G LG G E     S  R+       + QV+A  
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG VF  G N++   G  D  +    P  V+ L+      ++ G   T  LT
Sbjct: 200 AHSFALSLSGAVFGWGMNNAGQLGLSD-EKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGNGVV 290
             G V T G+ + GQLGH    D   P+ +  LE +GS V QIA G  + LA V  +G++
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLI 316

Query: 291 YSFGSGSNFCLGHG 304
           Y+FG G+   LG G
Sbjct: 317 YAFGCGARGQLGTG 330



 Score = 71.2 bits (173), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 83/165 (50%), Gaps = 25/165 (15%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           T GQLGH    ++P        E++G+     ++ +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 299 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADG 156


>gi|194767960|ref|XP_001966082.1| GF19414 [Drosophila ananassae]
 gi|190622967|gb|EDV38491.1| GF19414 [Drosophila ananassae]
          Length = 5087

 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 75/228 (32%), Positives = 107/228 (46%), Gaps = 7/228 (3%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            G++   L  +  VFS G    G LGHG  TT      ++    A  +  V+   +H+A +
Sbjct: 3170 GKHALALTLDGKVFSWGEGEDGKLGHGNRTT-LDKPRQVEALRAKKIRDVACGSSHSAAI 3228

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
               G+++T G       GH D N    +P+LV AL G    QV  G     T  LT  G 
Sbjct: 3229 SSQGELYTWGLGEYGRLGHGD-NATQLKPKLVAALAGRRVVQVACGSRDAQTLALTEDGA 3287

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +    TP  I  L  +G V+QI  G  + LA+T  G V+++G G
Sbjct: 3288 VFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIG-VIQIECGAQFSLALTRAGEVWTWGKG 3346

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              + LGHG      +P+ I   R  G  V+ V+ G  H +A+  SG V
Sbjct: 3347 DYYRLGHGGDQHVRKPQPIGGLR--GRRVIHVAVGALHCLAVTDSGQV 3392



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 72/242 (29%), Positives = 113/242 (46%), Gaps = 22/242 (9%)

Query: 114  MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV------- 165
            + I  G     ++S    VF+CG    G LG G      V++  +  P    V       
Sbjct: 3110 IHIAGGSKSLFIVSQEGRVFACGEGTNGRLGLG------VTYN-VPLPHQLPVLHQYVVK 3162

Query: 166  -VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
             V V +   HA  +   G+VF+ G+      GH +    + +PR VEAL+    + V  G
Sbjct: 3163 KVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTT-LDKPRQVEALRAKKIRDVACG 3221

Query: 225  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG--PSYML 282
             + +  ++ +G ++T G   +G+LGHGD   +  PK +A L     VVQ+A G   +  L
Sbjct: 3222 SSHSAAISSQGELYTWGLGEYGRLGHGDNATQLKPKLVAALAGR-RVVQVACGSRDAQTL 3280

Query: 283  AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            A+T +G V+S+G G    LG G       P  I+  R  GI V+++  G +  +AL  +G
Sbjct: 3281 ALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIE--RLSGIGVIQIECGAQFSLALTRAG 3338

Query: 343  YV 344
             V
Sbjct: 3339 EV 3340



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 55/181 (30%), Positives = 87/181 (48%), Gaps = 6/181 (3%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAG 224
            V V++   H   +   G+V+  G+      GH   NR  + RP+LVE L G+    +  G
Sbjct: 4314 VAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH--GNRVSYDRPKLVEHLHGMSVADIACG 4371

Query: 225  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLA 283
               +  +T  G V T G   +G+LGHGD+ D+  PK +  L    ++ +   +G +  L 
Sbjct: 4372 SAHSAAITASGQVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLC 4431

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I++    G+ V++V  G +  VAL  SG 
Sbjct: 4432 ITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESL--AGLGVIKVECGSQFSVALTKSGA 4489

Query: 344  V 344
            V
Sbjct: 4490 V 4490



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 76/287 (26%), Positives = 113/287 (39%), Gaps = 66/287 (22%)

Query: 113  NMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH---VVQV 168
             + + +G  H L L +   V++ G    G LGHG      VS+ R       H   V  +
Sbjct: 4313 KVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNR----VSYDRPKLVEHLHGMSVADI 4368

Query: 169  SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG------------- 215
            +    H+A +  SGQV T G       GH D+   + RP+LVEAL G             
Sbjct: 4369 ACGSAHSAAITASGQVLTWGKGRYGRLGHGDSEDQL-RPKLVEALLGYRAIDIACGSGDA 4427

Query: 216  -------------------------------VPCK----------QVTAGLNFTGFLTIR 234
                                           +P K          +V  G  F+  LT  
Sbjct: 4428 QTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKS 4487

Query: 235  GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
            G V+T G     +LGHG       PK +A L+    ++ IA G  + +A + +G VY++G
Sbjct: 4488 GAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQG-KKIISIATGSLHCVACSDSGEVYTWG 4546

Query: 295  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
                  LG G      +PR +     +G H+V+V+ G  H +AL +S
Sbjct: 4547 DNDEGQLGDGTVTAIQRPRLVSAL--QGKHIVKVTCGSAHTLALSTS 4591



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/162 (32%), Positives = 85/162 (52%), Gaps = 6/162 (3%)

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            ++ G       GH DT+     P  + AL+    + V  G  ++  +T  G++ T G  
Sbjct: 652 AYSWGAGEDHRLGHGDTHARAV-PTKIAALEQHCVQSVFCGCTYSAVITCGGNLLTWGRG 710

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
           T+ +LGHG++ DR  P  +A L E   V V + +G ++ LA+T  G+V+++G G    LG
Sbjct: 711 TYARLGHGNSDDRCLPTLVAALAEHTVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLG 770

Query: 303 HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           +G  +  LQP  +++  R    V R+ AG ++ VAL S G V
Sbjct: 771 NGNCNGSLQPILVESLPR----VQRIFAGSQYSVALSSEGQV 808



 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 97/225 (43%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            +  G  H+  IS+   +++ G    G LGHG   TQ +    +   +   VVQV+     
Sbjct: 3218 VACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQ-LKPKLVAALAGRRVVQVACGSRD 3276

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    + + G VF+ GD      G R  +     P  +E L G+   Q+  G  F+  LT
Sbjct: 3277 AQTLALTEDGAVFSWGDGDFGKLG-RGGSEGSDTPHEIERLSGIGVIQIECGAQFSLALT 3335

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG       P+ I  L     V+ +A G  + LAVT +G VY+
Sbjct: 3336 RAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGR-RVIHVAVGALHCLAVTDSGQVYA 3394

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G G      +P  +       + V RV+ G  H +A
Sbjct: 3395 WGDNDHGQQGSGNTFVNKKPALVIGL--DDVFVNRVACGSSHSIA 3437



 Score = 54.7 bits (130), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 58/129 (44%), Gaps = 15/129 (11%)

Query: 230 FLTIRGH--------------VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
           F++I GH               ++ G+    +LGHGDT  R  P  IA LE+   V  + 
Sbjct: 631 FISIAGHCEGRHFMAIDSNHNAYSWGAGEDHRLGHGDTHARAVPTKIAALEQ-HCVQSVF 689

Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
            G +Y   +T  G + ++G G+   LGHG   D   P  +       +  V + +GD H 
Sbjct: 690 CGCTYSAVITCGGNLLTWGRGTYARLGHGNSDDRCLPTLVAALAEHTVVDVALGSGDAHS 749

Query: 336 VALDSSGYV 344
           +AL S G V
Sbjct: 750 LALTSEGLV 758


>gi|386780812|ref|NP_001248295.1| probable E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
 gi|355687450|gb|EHH26034.1| Putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
 gi|355749437|gb|EHH53836.1| Putative E3 ubiquitin-protein ligase HERC3 [Macaca fascicularis]
 gi|380817668|gb|AFE80708.1| putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
 gi|383408291|gb|AFH27359.1| putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
          Length = 1050

 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 110/227 (48%), Gaps = 7/227 (3%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 99

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 239 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGV 263



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 75/234 (32%), Positives = 113/234 (48%), Gaps = 7/234 (2%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYV 344
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLI 316



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/189 (30%), Positives = 101/189 (53%), Gaps = 10/189 (5%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N    +P  + AL    
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN----KPEQIGALADQH 85

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 336 VALDSSGYV 344
            AL  SG V
Sbjct: 203 FALSLSGAV 211



 Score = 72.4 bits (176), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 64/194 (32%), Positives = 95/194 (48%), Gaps = 6/194 (3%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++ G +H L L ++   F+ G +  G LG G E     S  R+       + QV+A  
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG VF  G N++   G  D  +    P  V+ L+      ++ G   T  LT
Sbjct: 200 AHSFALSLSGAVFGWGMNNAGQLGLSD-EKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGNGVV 290
             G V T G+ + GQLGH    D   P+ +  LE +GS V QIA G  + LA V  +G++
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLI 316

Query: 291 YSFGSGSNFCLGHG 304
           Y+FG G+   LG G
Sbjct: 317 YAFGCGARGQLGTG 330



 Score = 71.2 bits (173), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 83/165 (50%), Gaps = 25/165 (15%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           T GQLGH    ++P        E++G+     ++ +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 299 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADG 156


>gi|118398943|ref|XP_001031798.1| regulator of chromosome condensation (RCC1) [Tetrahymena
           thermophila]
 gi|89286132|gb|EAR84135.1| regulator of chromosome condensation (RCC1) [Tetrahymena
           thermophila SB210]
          Length = 443

 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/238 (28%), Positives = 109/238 (45%), Gaps = 24/238 (10%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETT-QCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 183
           L  N  V+S G +  G+LGH    +       RI       + Q+S  + H A V + G+
Sbjct: 97  LTHNGEVYSWGKNKGGILGHEDRLSFNMTQPERIEKLLGKKIKQISCGQFHMAAVTEDGE 156

Query: 184 VFTCGDNSSFCCGHR------------------DTNRPIFRPRLVEALKGVPCKQVTAGL 225
           V+T G+      GH                   D  +    P+ +E+L  +  KQV  G+
Sbjct: 157 VYTWGNKEFGKLGHEEELKQEQKIKIKRGNLSHDYLQDSMLPQKIESLGNIKAKQVACGI 216

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
            FT  L+  G V+T G N +G LG+  D     TP+ I  L +   +V+I+AG S+  A+
Sbjct: 217 QFTVVLSEDGKVYTFGYNQYGSLGYVSDQNSVTTPQLIKDLND---IVKISAGYSFCAAI 273

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           T  G +Y++G+  N  LG+ +   + +P  +  F  +   +V VS GD  + AL   G
Sbjct: 274 TKQGKLYTWGNNRNGQLGNSQSLYQTKPSIVTGFGSQN-SIVDVSCGDNFIAALTQQG 330



 Score = 88.6 bits (218), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 60/241 (24%), Positives = 117/241 (48%), Gaps = 25/241 (10%)

Query: 115 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPE--TTQCVSFTRINF----------PS 161
           QI+ G++H   ++ +  V++ G+   G LGH  E    Q +   R N           P 
Sbjct: 140 QISCGQFHMAAVTEDGEVYTWGNKEFGKLGHEEELKQEQKIKIKRGNLSHDYLQDSMLPQ 199

Query: 162 AAHVV------QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
               +      QV+        + + G+V+T G N     G+      +  P+L++ L  
Sbjct: 200 KIESLGNIKAKQVACGIQFTVVLSEDGKVYTFGYNQYGSLGYVSDQNSVTTPQLIKDLND 259

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
           +   +++AG +F   +T +G ++T G+N +GQLG+  +L +  P  +       S+V ++
Sbjct: 260 IV--KISAGYSFCAAITKQGKLYTWGNNRNGQLGNSQSLYQTKPSIVTGFGSQNSIVDVS 317

Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
            G +++ A+T  G +Y++G G +  LGHG + D   PR ++ F++K   +++++ G  H 
Sbjct: 318 CGDNFIAALTQQGQLYTWGFGGDGQLGHGNKSDLYAPRHVE-FKQK---IIKIACGGSHA 373

Query: 336 V 336
            
Sbjct: 374 A 374



 Score = 75.5 bits (184), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 67/241 (27%), Positives = 116/241 (48%), Gaps = 22/241 (9%)

Query: 110 SAGNM---QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV 165
           S GN+   Q+  G   T+++S +  V++ G +  G LG+  +     +   I       +
Sbjct: 203 SLGNIKAKQVACGIQFTVVLSEDGKVYTFGYNQYGSLGYVSDQNSVTTPQLI--KDLNDI 260

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF--RPRLVEALKGV-PCKQVT 222
           V++SA  +  A + + G+++T G+N +   G    ++ ++  +P +V           V+
Sbjct: 261 VKISAGYSFCAAITKQGKLYTWGNNRN---GQLGNSQSLYQTKPSIVTGFGSQNSIVDVS 317

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
            G NF   LT +G ++T G    GQLGHG+  D   P+ +   +++   ++IA G S+  
Sbjct: 318 CGDNFIAALTQQGQLYTWGFGGDGQLGHGNKSDLYAPRHVEFKQKI---IKIACGGSHAA 374

Query: 283 AVTGNGVVYSFGSGSNFCLGHG-----EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +T +  +Y FG GS   LG G     E      P  +Q F  KG  VV V+ G EH +A
Sbjct: 375 FITEDNQLYQFGRGSEGQLGIGQNVASEASIRSTPNLVQYF--KGKQVVDVTCGGEHTIA 432

Query: 338 L 338
           +
Sbjct: 433 I 433



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 58/233 (24%), Positives = 99/233 (42%), Gaps = 27/233 (11%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
           V+S G    G LG   E       T I   +   + +V A ++ +  +  +G+V++ G N
Sbjct: 51  VYSWGYGGFGQLGLQNENNYYTP-TEIEVLTDKKIKKVEAGKSISMALTHNGEVYSWGKN 109

Query: 191 SSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
                GH D  +  + +P  +E L G   KQ++ G      +T  G V+T G+   G+LG
Sbjct: 110 KGGILGHEDRLSFNMTQPERIEKLLGKKIKQISCGQFHMAAVTEDGEVYTWGNKEFGKLG 169

Query: 250 HGDTL-------------------DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           H + L                   D   P+ I  L  +    Q+A G  + + ++ +G V
Sbjct: 170 HEEELKQEQKIKIKRGNLSHDYLQDSMLPQKIESLGNI-KAKQVACGIQFTVVLSEDGKV 228

Query: 291 YSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           Y+FG      LG+  +Q+    P+ I+        +V++SAG     A+   G
Sbjct: 229 YTFGYNQYGSLGYVSDQNSVTTPQLIKDLN----DIVKISAGYSFCAAITKQG 277



 Score = 58.2 bits (139), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 75/162 (46%), Gaps = 26/162 (16%)

Query: 205 FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTL--DRPTPKSI 262
           + P  +E L     K+V AG + +  LT  G V++ G N  G LGH D L  +   P+ I
Sbjct: 71  YTPTEIEVLTDKKIKKVEAGKSISMALTHNGEVYSWGKNKGGILGHEDRLSFNMTQPERI 130

Query: 263 APLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ--------------- 306
             L  +G  + QI+ G  +M AVT +G VY++G+     LGH E+               
Sbjct: 131 EKL--LGKKIKQISCGQFHMAAVTEDGEVYTWGNKEFGKLGHEEELKQEQKIKIKRGNLS 188

Query: 307 HDELQ----PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           HD LQ    P+ I++     I   +V+ G +  V L   G V
Sbjct: 189 HDYLQDSMLPQKIESLGN--IKAKQVACGIQFTVVLSEDGKV 228


>gi|405954062|gb|EKC21598.1| Putative E3 ubiquitin-protein ligase HERC4 [Crassostrea gigas]
          Length = 1059

 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/236 (28%), Positives = 120/236 (50%), Gaps = 9/236 (3%)

Query: 115 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP---SAAHVVQVSA 170
           +I+ G  HTL+++ +  ++SCGS+  G LGH    ++ VS   +      S+  V+Q + 
Sbjct: 41  EISCGEKHTLIVTKDGKLYSCGSNEYGELGHSKPRSRAVSIDVVELVSSLSSMQVIQAAG 100

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTG 229
               +  +  +G+VF+ G N     G    ++   R P+L+++L      Q+T G N   
Sbjct: 101 GSEFSLVITTAGEVFSWGRNDKGQLGRGKLSKEEERKPKLMKSLAVCTVVQITCGANHCL 160

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
            LT  G + + G N +GQLG G +     TP+ I  L  +  + QIA+G ++   +T + 
Sbjct: 161 ALTDDGRLFSWGCNKYGQLGLGSSHSFHDTPQQIVCLRGI-PIAQIASGGNHSFILTWSR 219

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            V+ +G  S   LG  +++D+  P   ++ R +   V+ +S G++H VAL   G V
Sbjct: 220 AVFGWGKNSFGQLGLNDEYDKSHPTLCKSLRNQ--KVMYISCGEDHTVALTKEGGV 273



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 72/246 (29%), Positives = 116/246 (47%), Gaps = 10/246 (4%)

Query: 103 SSDIVE--TSAGNMQITT---GRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR 156
           S D+VE  +S  +MQ+     G   +L+I+ +  VFS G +  G LG G  + +     +
Sbjct: 80  SIDVVELVSSLSSMQVIQAAGGSEFSLVITTAGEVFSWGRNDKGQLGRGKLSKEEERKPK 139

Query: 157 INFPSAA-HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           +    A   VVQ++   NH   +   G++F+ G N     G   ++     P+ +  L+G
Sbjct: 140 LMKSLAVCTVVQITCGANHCLALTDDGRLFSWGCNKYGQLGLGSSHSFHDTPQQIVCLRG 199

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
           +P  Q+ +G N +  LT    V   G N+ GQLG  D  D+  P     L     V+ I+
Sbjct: 200 IPIAQIASGGNHSFILTWSRAVFGWGKNSFGQLGLNDEYDKSHPTLCKSLRN-QKVMYIS 258

Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
            G  + +A+T  G V+SFG+G    LGH    +E+ P+ +      G  + +V+ G  H 
Sbjct: 259 CGEDHTVALTKEGGVFSFGAGGFGQLGHNSTQNEILPKRVMELM--GSVISQVACGRRHT 316

Query: 336 VALDSS 341
           VA   S
Sbjct: 317 VAFSPS 322



 Score = 74.3 bits (181), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 66/218 (30%), Positives = 98/218 (44%), Gaps = 10/218 (4%)

Query: 131 VFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 189
           VF  G S  G L  G  E T  +S   ++      + ++S  E H   V + G++++CG 
Sbjct: 4   VFGWGRSNDGQLSIGFSEETSILSPKEVSRLQELDIKEISCGEKHTLIVTKDGKLYSCGS 63

Query: 190 NSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
           N     GH   R     I    LV +L  +   Q   G  F+  +T  G V + G N  G
Sbjct: 64  NEYGELGHSKPRSRAVSIDVVELVSSLSSMQVIQAAGGSEFSLVITTAGEVFSWGRNDKG 123

Query: 247 QLGHGD--TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG 304
           QLG G     +   PK +  L  V +VVQI  G ++ LA+T +G ++S+G      LG G
Sbjct: 124 QLGRGKLSKEEERKPKLMKSL-AVCTVVQITCGANHCLALTDDGRLFSWGCNKYGQLGLG 182

Query: 305 EQHD-ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
             H     P+ I   R  GI + ++++G  H   L  S
Sbjct: 183 SSHSFHDTPQQIVCLR--GIPIAQIASGGNHSFILTWS 218



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 75/146 (51%), Gaps = 11/146 (7%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           I  P+ V  L+ +  K+++ G   T  +T  G +++CGSN +G+LGH     R    SI 
Sbjct: 25  ILSPKEVSRLQELDIKEISCGEKHTLIVTKDGKLYSCGSNEYGELGHSKPRSRAV--SID 82

Query: 264 PLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE--QHDELQPRAIQ 316
            +E V S     V+Q A G  + L +T  G V+S+G      LG G+  + +E +P+ ++
Sbjct: 83  VVELVSSLSSMQVIQAAGGSEFSLVITTAGEVFSWGRNDKGQLGRGKLSKEEERKPKLMK 142

Query: 317 TFRRKGIHVVRVSAGDEHVVALDSSG 342
           +       VV+++ G  H +AL   G
Sbjct: 143 SL--AVCTVVQITCGANHCLALTDDG 166



 Score = 57.8 bits (138), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 88/183 (48%), Gaps = 6/183 (3%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QIT G  H L L  +  +FS G +  G LG G   +   +  +I       + Q+++  
Sbjct: 150 VQITCGANHCLALTDDGRLFSWGCNKYGQLGLGSSHSFHDTPQQIVCLRGIPIAQIASGG 209

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           NH+  +  S  VF  G NS    G  D       P L ++L+      ++ G + T  LT
Sbjct: 210 NHSFILTWSRAVFGWGKNSFGQLGLNDEYDKS-HPTLCKSLRNQKVMYISCGEDHTVALT 268

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLAVT-GNGVV 290
             G V + G+   GQLGH  T +   PK +  +E +GSV+ Q+A G  + +A +  +G +
Sbjct: 269 KEGGVFSFGAGGFGQLGHNSTQNEILPKRV--MELMGSVISQVACGRRHTVAFSPSSGKM 326

Query: 291 YSF 293
           Y+F
Sbjct: 327 YAF 329


>gi|403263478|ref|XP_003924058.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Saimiri
           boliviensis boliviensis]
          Length = 1050

 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 110/227 (48%), Gaps = 7/227 (3%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 99

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 239 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGV 263



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 75/234 (32%), Positives = 113/234 (48%), Gaps = 7/234 (2%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYV 344
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLI 316



 Score = 75.5 bits (184), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/189 (30%), Positives = 101/189 (53%), Gaps = 10/189 (5%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N    +P  + AL    
Sbjct: 30  FISDRTVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN----KPEQIGALADQH 85

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 336 VALDSSGYV 344
            AL  SG V
Sbjct: 203 FALSLSGAV 211



 Score = 72.4 bits (176), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 64/194 (32%), Positives = 95/194 (48%), Gaps = 6/194 (3%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++ G +H L L ++   F+ G +  G LG G E     S  R+       + QV+A  
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG VF  G N++   G  D  +    P  V+ L+      ++ G   T  LT
Sbjct: 200 AHSFALSLSGAVFGWGMNNAGQLGLSD-EKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGNGVV 290
             G V T G+ + GQLGH    D   P+ +  LE +GS V QIA G  + LA V  +G++
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLI 316

Query: 291 YSFGSGSNFCLGHG 304
           Y+FG G+   LG G
Sbjct: 317 YAFGCGARGQLGTG 330



 Score = 71.2 bits (173), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 83/165 (50%), Gaps = 25/165 (15%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTSLQGIVAEPQVCGFISDRTVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           T GQLGH    ++P        E++G+     ++ +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 299 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADG 156


>gi|426231463|ref|XP_004009758.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Ovis aries]
          Length = 1050

 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 110/227 (48%), Gaps = 7/227 (3%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG++  G LGH  E  +     +I   +  H+V V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGANTKGQLGHEREGNKP---EQIGALADQHIVHVACGESHSLAL 99

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 239 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G     + +P+ +  LE +  + Q+ AG ++  A++ +G V+ +G  +
Sbjct: 160 TWGRNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVVAGGAHSFALSLSGAVFGWGMNN 218

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGV 263



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 75/234 (32%), Positives = 113/234 (48%), Gaps = 7/234 (2%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  VHVACGESHSLALSDQGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGRNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVVAGGAHSFAL 205

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVF 264

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYV 344
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLI 316



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/165 (30%), Positives = 84/165 (50%), Gaps = 25/165 (15%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG+N
Sbjct: 2   LCWGYWSLGQPGISPNLQGVVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGAN 61

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           T GQLGH    ++P        E++G+     +V +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIVHVACGESHSLALSDQGQLFSWGAGSD 113

Query: 299 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADG 156



 Score = 70.9 bits (172), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 64/194 (32%), Positives = 94/194 (48%), Gaps = 6/194 (3%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++ G +H L L ++   F+ G +  G LG G E     S  R+       + QV A  
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGRNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVVAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG VF  G N++   G  D  +    P  V+ L+      ++ G   T  LT
Sbjct: 200 AHSFALSLSGAVFGWGMNNAGQLGLSD-EKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGNGVV 290
             G V T G+ + GQLGH    D   P+ +  LE +GS V QIA G  + LA V  +G++
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLI 316

Query: 291 YSFGSGSNFCLGHG 304
           Y+FG G+   LG G
Sbjct: 317 YAFGCGARGQLGTG 330


>gi|115461450|ref|NP_001054325.1| Os04g0686200 [Oryza sativa Japonica Group]
 gi|38345822|emb|CAD41927.2| OSJNBa0070M12.5 [Oryza sativa Japonica Group]
 gi|113565896|dbj|BAF16239.1| Os04g0686200 [Oryza sativa Japonica Group]
 gi|222629813|gb|EEE61945.1| hypothetical protein OsJ_16701 [Oryza sativa Japonica Group]
          Length = 1057

 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 113/227 (49%), Gaps = 15/227 (6%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           ++ G +HT LI++S  +++ G    GVLGHG   T  +S+ + +        + VS    
Sbjct: 373 VSCGTWHTALITSSGKLYTFGDGTFGVLGHGNRET--ISYPKEVESLKGLRTISVSCGVW 430

Query: 174 HAAFVLQ---------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           H A V++         SG++FT GD   +  GH D +  + +P  V +L      +   G
Sbjct: 431 HTAAVVEVIMAQSNTSSGKLFTWGDGDKYRLGHGDRSSKL-KPTCVPSLIDYNFHKAVCG 489

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
              T  LT  GH+ T GS+ +GQLG+ +   R  P+ +      G VV++A G  ++  +
Sbjct: 490 HTLTIGLTTSGHIFTAGSSVYGQLGNPNNDGR-YPRLVEEKLGGGGVVEVACGAYHVAVL 548

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
           T +G VY++G G+N  LGHG+  D   P  ++  R + +  +   +G
Sbjct: 549 TQSGEVYTWGKGANGRLGHGDIADRKTPTFVEALRDRSVKRIACGSG 595



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/177 (33%), Positives = 90/177 (50%), Gaps = 7/177 (3%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  V+    HAA V +  +VFT G+  S   GH      IF+PRLVE+L     + +  G
Sbjct: 263 VSYVACGVKHAALVTRQAEVFTWGEECSGRLGH-GAGTSIFQPRLVESLSICNVETIACG 321

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
              T  +T  G ++T G  TH  G LGHG  +    PK ++ PLE +  V  ++ G  + 
Sbjct: 322 EFHTCAITATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSGPLEGL-QVSAVSCGTWHT 380

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             +T +G +Y+FG G+   LGHG +     P+ +++   KG+  + VS G  H  A+
Sbjct: 381 ALITSSGKLYTFGDGTFGVLGHGNRETISYPKEVESL--KGLRTISVSCGVWHTAAV 435



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/236 (24%), Positives = 106/236 (44%), Gaps = 15/236 (6%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           ++  L+   + VF+ G    G LGHG  T+       +   S  +V  ++  E H   + 
Sbjct: 271 KHAALVTRQAEVFTWGEECSGRLGHGAGTS-IFQPRLVESLSICNVETIACGEFHTCAIT 329

Query: 180 QSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
            +G ++T GD  +++   GH          R+   L+G+    V+ G   T  +T  G +
Sbjct: 330 ATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSGPLEGLQVSAVSCGTWHTALITSSGKL 389

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV---------TGNG 288
           +T G  T G LGHG+      PK +  L+ +   + ++ G  +  AV         T +G
Sbjct: 390 YTFGDGTFGVLGHGNRETISYPKEVESLKGL-RTISVSCGVWHTAAVVEVIMAQSNTSSG 448

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            ++++G G  + LGHG++  +L+P  + +      H  +   G    + L +SG++
Sbjct: 449 KLFTWGDGDKYRLGHGDRSSKLKPTCVPSLIDYNFH--KAVCGHTLTIGLTTSGHI 502



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 65/141 (46%), Gaps = 4/141 (2%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           I  P+ +E+   +    V  G+     +T +  V T G    G+LGHG       P+ + 
Sbjct: 249 ILVPKPLESNVMLDVSYVACGVKHAALVTRQAEVFTWGEECSGRLGHGAGTSIFQPRLVE 308

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRK 321
            L  + +V  IA G  +  A+T  G +Y++G G++    LGHG       P+ + +   +
Sbjct: 309 SL-SICNVETIACGEFHTCAITATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRV-SGPLE 366

Query: 322 GIHVVRVSAGDEHVVALDSSG 342
           G+ V  VS G  H   + SSG
Sbjct: 367 GLQVSAVSCGTWHTALITSSG 387



 Score = 43.5 bits (101), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 54/114 (47%), Gaps = 7/114 (6%)

Query: 122 HTL---LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           HTL   L ++  +F+ GSS+ G LG+     +              VV+V+    H A +
Sbjct: 490 HTLTIGLTTSGHIFTAGSSVYGQLGNPNNDGRYPRLVEEKL-GGGGVVEVACGAYHVAVL 548

Query: 179 LQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
            QSG+V+T G  ++   GH D  +R    P  VEAL+    K++  G  FT  +
Sbjct: 549 TQSGEVYTWGKGANGRLGHGDIADRKT--PTFVEALRDRSVKRIACGSGFTAAI 600


>gi|7657152|ref|NP_055421.1| probable E3 ubiquitin-protein ligase HERC3 isoform 1 [Homo sapiens]
 gi|397480079|ref|XP_003811323.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
           [Pan paniscus]
 gi|426344933|ref|XP_004039158.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
           [Gorilla gorilla gorilla]
 gi|2495699|sp|Q15034.1|HERC3_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC3; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           3
 gi|119626429|gb|EAX06024.1| hect domain and RLD 3 [Homo sapiens]
 gi|158261003|dbj|BAF82679.1| unnamed protein product [Homo sapiens]
 gi|168274306|dbj|BAG09573.1| E3 ubiquitin-protein ligase HERC3 [synthetic construct]
 gi|187252515|gb|AAI66672.1| Hect domain and RLD 3 [synthetic construct]
 gi|410211922|gb|JAA03180.1| hect domain and RLD 3 [Pan troglodytes]
 gi|410261200|gb|JAA18566.1| hect domain and RLD 3 [Pan troglodytes]
 gi|410295580|gb|JAA26390.1| hect domain and RLD 3 [Pan troglodytes]
 gi|410339519|gb|JAA38706.1| hect domain and RLD 3 [Pan troglodytes]
          Length = 1050

 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 109/225 (48%), Gaps = 7/225 (3%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 99

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 239 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSG 261



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 75/234 (32%), Positives = 113/234 (48%), Gaps = 7/234 (2%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYV 344
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLI 316



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/189 (30%), Positives = 101/189 (53%), Gaps = 10/189 (5%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N    +P  + AL    
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN----KPEQIGALADQH 85

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 336 VALDSSGYV 344
            AL  SG V
Sbjct: 203 FALSLSGAV 211



 Score = 72.4 bits (176), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 64/194 (32%), Positives = 95/194 (48%), Gaps = 6/194 (3%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++ G +H L L ++   F+ G +  G LG G E     S  R+       + QV+A  
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG VF  G N++   G  D  +    P  V+ L+      ++ G   T  LT
Sbjct: 200 AHSFALSLSGAVFGWGMNNAGQLGLSD-EKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGNGVV 290
             G V T G+ + GQLGH    D   P+ +  LE +GS V QIA G  + LA V  +G++
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLI 316

Query: 291 YSFGSGSNFCLGHG 304
           Y+FG G+   LG G
Sbjct: 317 YAFGCGARGQLGTG 330



 Score = 71.2 bits (173), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 83/165 (50%), Gaps = 25/165 (15%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           T GQLGH    ++P        E++G+     ++ +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 299 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADG 156


>gi|225438373|ref|XP_002274569.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Vitis
           vinifera]
 gi|296082603|emb|CBI21608.3| unnamed protein product [Vitis vinifera]
          Length = 445

 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/231 (29%), Positives = 112/231 (48%), Gaps = 7/231 (3%)

Query: 114 MQITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS 171
           + +T G  HT   S S   V+S G    G LGHG  ++   +   I       + Q++  
Sbjct: 71  VSVTCGADHTTAYSESFTQVYSWGWGDFGRLGHG-NSSDLFTPQPIKALHGLRIKQIACG 129

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           ++H   V   G+V + G N +   G   T   +  P+ ++A +GV  K V AG   T  +
Sbjct: 130 DSHCLAVTMDGEVQSWGRNQNGQLGLGTTEDSLV-PQKIQAFQGVSVKMVAAGAEHTAAV 188

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           T  G ++  G   +G LG GD  DR  P+ ++ +E V  +V++A G  + ++V+ +G +Y
Sbjct: 189 TEDGELYGWGWGRYGNLGLGDRNDRLVPEKVSTVEGV-KMVKVACGWRHTISVSSSGGLY 247

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           ++G      LGHG+  D L P  ++  +   I    +S G  H +AL S G
Sbjct: 248 TYGWSKYGQLGHGDFEDHLTPHKLEALQENLIS--EISGGWRHTMALTSDG 296



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/179 (34%), Positives = 88/179 (49%), Gaps = 5/179 (2%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V+ +SA  +H+  +L    V + G       GH D    +  P  + AL G     VT G
Sbjct: 18  VLLISAGASHSVALLSGNVVCSWGRGEDGQLGHGDAEDRL-SPTYLSALDGHEVVSVTCG 76

Query: 225 LNFT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            + T  +      V++ G    G+LGHG++ D  TP+ I  L  +  + QIA G S+ LA
Sbjct: 77  ADHTTAYSESFTQVYSWGWGDFGRLGHGNSSDLFTPQPIKALHGL-RIKQIACGDSHCLA 135

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           VT +G V S+G   N  LG G   D L P+ IQ F  +G+ V  V+AG EH  A+   G
Sbjct: 136 VTMDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAF--QGVSVKMVAAGAEHTAAVTEDG 192



 Score = 78.6 bits (192), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 98/209 (46%), Gaps = 6/209 (2%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HT  ++ +  ++  G    G LG G    + V   +++      +V+V+    H
Sbjct: 178 VAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRNDRLVP-EKVSTVEGVKMVKVACGWRH 236

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V  SG ++T G +     GH D    +  P  +EAL+     +++ G   T  LT  
Sbjct: 237 TISVSSSGGLYTYGWSKYGQLGHGDFEDHL-TPHKLEALQENLISEISGGWRHTMALTSD 295

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
           G ++  G N  GQ+G GD +D  +P  +  P E+   VV I+ G  + LAVT    V+S+
Sbjct: 296 GKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPHEQ--KVVHISCGWRHTLAVTERQNVFSW 353

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           G G+N  LGHGE  D   P+ I+     G
Sbjct: 354 GRGTNGQLGHGESIDRNIPKMIEVLSADG 382



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 74/158 (46%), Gaps = 3/158 (1%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G  HT+ +S+S  +++ G S  G LGHG +    ++  ++       + ++S   
Sbjct: 228 VKVACGWRHTISVSSSGGLYTYGWSKYGQLGHG-DFEDHLTPHKLEALQENLISEISGGW 286

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H   +   G+++  G N     G  D N     P  V+         ++ G   T  +T
Sbjct: 287 RHTMALTSDGKLYGWGWNKFGQVGVGD-NVDHCSPVQVKFPHEQKVVHISCGWRHTLAVT 345

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 270
            R +V + G  T+GQLGHG+++DR  PK I  L   GS
Sbjct: 346 ERQNVFSWGRGTNGQLGHGESIDRNIPKMIEVLSADGS 383


>gi|156372872|ref|XP_001629259.1| predicted protein [Nematostella vectensis]
 gi|156216255|gb|EDO37196.1| predicted protein [Nematostella vectensis]
          Length = 4220

 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 72/230 (31%), Positives = 110/230 (47%), Gaps = 7/230 (3%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           T G++   L     V+S GS   G LGHG +T+     T +   +   V+++S    H+A
Sbjct: 24  TDGKHFLALTREGEVYSWGSGDGGKLGHG-DTSPREEPTLVTGLAGKQVIRISCGSTHSA 82

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI--R 234
            V   G+++T G  +    GH  +   +  P LV  L+G     V  G      L     
Sbjct: 83  AVTSEGELYTWGRGNYGRLGHGSSEDQLV-PVLVSGLRGHHIIDVACGSGDAHTLAAADD 141

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G V + G   +G+LG G +     PKSI  L+ +G V ++  G  + LA+T +G V+++G
Sbjct: 142 GTVWSWGDGDYGKLGRGGSDGCKNPKSIERLQGLG-VCKVYCGAQFSLALTRDGSVWTWG 200

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            G  F LGHG +     P+ ++     G HVV VS G  H +AL  +G V
Sbjct: 201 KGEGFRLGHGTEDHVRHPKLVEAL--DGKHVVDVSVGSIHCLALTDAGEV 248



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 106/228 (46%), Gaps = 7/228 (3%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+   L     +FS G    G LGHG     C     I+   ++ V  +S   +H+A +
Sbjct: 2518 GRHAMALTIEGKLFSWGEGEDGKLGHG-NRMNCDHPKLIDTFKSSCVRDMSCGSSHSAAI 2576

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
            L SG+++T G       GH D N    +P+ V++        +  G     T  LT  G 
Sbjct: 2577 LSSGELYTWGLGEYGRLGHGD-NYTHLKPKKVQSFTSHRVIDIACGSRDAQTLALTDDGT 2635

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P  +  L+  G V ++A G  + LA++ +G+V+++G G
Sbjct: 2636 VWSWGDGDFGKLGRGGSEGCSVPNPVEKLQGQG-VCKVACGAQFSLALSTSGLVWTWGKG 2694

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              + LGHG      +P+ +   R  G  +V V+ G  H +A+  SG V
Sbjct: 2695 DYYRLGHGNDTHVRKPQIVDGLR--GKKIVDVAVGALHCLAVTDSGQV 2740



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 69/253 (27%), Positives = 121/253 (47%), Gaps = 12/253 (4%)

Query: 94   LRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVS 153
            ++ L+S++H   +V   A +   + G++   L ++  V+S G    G LGHG   + C  
Sbjct: 3430 IKMLESLQHV--VVRKVAVH---SGGKHAMALSADGDVYSWGEGDDGKLGHGNRNS-CDR 3483

Query: 154  FTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
               I       V+ +S   +H+A + Q+ +++T G       GH D+   +  P++VEAL
Sbjct: 3484 PRVIEALRGKGVIDISCGGSHSACITQNHELYTWGKGRYGRLGHGDSEDQLL-PKVVEAL 3542

Query: 214  KGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV 271
            +G     V   +G   T  LT    V + G   +G+LG G +     P  +  L  +G V
Sbjct: 3543 RGNRVIDVACGSGDAQTLCLTDDDCVWSWGDGDYGKLGRGGSDGCKIPMKVESLIGLG-V 3601

Query: 272  VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
             ++  G  + +A+T +G VY++G G  + LGHG      +P+ +     +G  V+ ++ G
Sbjct: 3602 SKVECGSQFSVALTRSGAVYTWGKGDYYRLGHGVDDHVRRPKRVAAL--QGKKVITIATG 3659

Query: 332  DEHVVALDSSGYV 344
              H VA   +G V
Sbjct: 3660 SLHCVASTDTGEV 3672



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/235 (28%), Positives = 109/235 (46%), Gaps = 9/235 (3%)

Query: 115  QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS--AS 171
            QI  G      +S +  VF+CG S  G LG GP +       +I   S+  V +VS  + 
Sbjct: 2458 QIAGGSKTLFAVSHDGKVFACGESTNGRLGLGPLSANVTVPRQIENLSSFMVRKVSVHSG 2517

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
              HA  +   G++F+ G+      GH +       P+L++  K    + ++ G + +  +
Sbjct: 2518 GRHAMALTIEGKLFSWGEGEDGKLGHGNRMN-CDHPKLIDTFKSSCVRDMSCGSSHSAAI 2576

Query: 232  TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG--PSYMLAVTGNGV 289
               G ++T G   +G+LGHGD      PK +        V+ IA G   +  LA+T +G 
Sbjct: 2577 LSSGELYTWGLGEYGRLGHGDNYTHLKPKKVQSFTS-HRVIDIACGSRDAQTLALTDDGT 2635

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            V+S+G G    LG G       P  ++  + +G  V +V+ G +  +AL +SG V
Sbjct: 2636 VWSWGDGDFGKLGRGGSEGCSVPNPVEKLQGQG--VCKVACGAQFSLALSTSGLV 2688



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 90/189 (47%), Gaps = 3/189 (1%)

Query: 158  NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVP 217
             F  A  V Q++        V   G+VF CG++++   G    +  +  PR +E L    
Sbjct: 2449 EFIGALKVQQIAGGSKTLFAVSHDGKVFACGESTNGRLGLGPLSANVTVPRQIENLSSFM 2508

Query: 218  CKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
             ++V+  +G      LTI G + + G    G+LGHG+ ++   PK I   +    V  ++
Sbjct: 2509 VRKVSVHSGGRHAMALTIEGKLFSWGEGEDGKLGHGNRMNCDHPKLIDTFKS-SCVRDMS 2567

Query: 276  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
             G S+  A+  +G +Y++G G    LGHG+ +  L+P+ +Q+F    +  +   + D   
Sbjct: 2568 CGSSHSAAILSSGELYTWGLGEYGRLGHGDNYTHLKPKKVQSFTSHRVIDIACGSRDAQT 2627

Query: 336  VALDSSGYV 344
            +AL   G V
Sbjct: 2628 LALTDDGTV 2636



 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 59/185 (31%), Positives = 83/185 (44%), Gaps = 5/185 (2%)

Query: 118 TGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G  HTL  ++  +V+S G    G LG G  +  C +   I       V +V      + 
Sbjct: 130 SGDAHTLAAADDGTVWSWGDGDYGKLGRG-GSDGCKNPKSIERLQGLGVCKVYCGAQFSL 188

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + G V+T G    F  GH  T   +  P+LVEAL G     V+ G      LT  G 
Sbjct: 189 ALTRDGSVWTWGKGEGFRLGH-GTEDHVRHPKLVEALDGKHVVDVSVGSIHCLALTDAGE 247

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           V+  G N  GQLG  D   RP P  ++ L   G +V IA GP+   A +  G  +S G+ 
Sbjct: 248 VYCWGRNDQGQLGDIDCQIRPEPTLVSGLASKG-IVGIACGPAQSFAWSCAG-QWSVGTR 305

Query: 297 SNFCL 301
             FC+
Sbjct: 306 LQFCV 310



 Score = 54.3 bits (129), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 80/167 (47%), Gaps = 7/167 (4%)

Query: 180  QSGQ--VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
            Q GQ  VF  G N     G    ++ I  P L E +  +  +Q+  G      ++  G V
Sbjct: 2417 QEGQIKVFVWGLNDKDQLGGLKGSK-IKVPVLSEFIGALKVQQIAGGSKTLFAVSHDGKV 2475

Query: 238  HTCGSNTHGQLGHGD-TLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
              CG +T+G+LG G  + +   P+ I  L   +   V + +G  + +A+T  G ++S+G 
Sbjct: 2476 FACGESTNGRLGLGPLSANVTVPRQIENLSSFMVRKVSVHSGGRHAMALTIEGKLFSWGE 2535

Query: 296  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            G +  LGHG + +   P+ I TF+   +    +S G  H  A+ SSG
Sbjct: 2536 GEDGKLGHGNRMNCDHPKLIDTFKSSCVR--DMSCGSSHSAAILSSG 2580



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 49/158 (31%), Positives = 77/158 (48%), Gaps = 10/158 (6%)

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SG ++  G N     G  +  + +  P+ +EAL  +   Q+  G      +T  G V+  
Sbjct: 3353 SGTIYGWGHNHRGQLGSLEGAK-VKLPQTIEALASIRPVQIVGGEQTLFAVTAEGKVYAT 3411

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV----VQIAAGPSYMLAVTGNGVVYSFGSG 296
            G    G+LG G T    T  SI  LE +  V    V + +G  + +A++ +G VYS+G G
Sbjct: 3412 GYGHGGRLGLGGT---DTVTSIKMLESLQHVVVRKVAVHSGGKHAMALSADGDVYSWGEG 3468

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 334
             +  LGHG ++   +PR I+  R KG  V+ +S G  H
Sbjct: 3469 DDGKLGHGNRNSCDRPRVIEALRGKG--VIDISCGGSH 3504



 Score = 45.8 bits (107), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 70/160 (43%), Gaps = 5/160 (3%)

Query: 125  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
            L  + +V+S G    G LG G  +  C     +       V +V+     +  +  SG V
Sbjct: 2630 LTDDGTVWSWGDGDFGKLGRG-GSEGCSVPNPVEKLQGQGVCKVACGAQFSLALSTSGLV 2688

Query: 185  FTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            +T G    +  GH  DT+  + +P++V+ L+G     V  G      +T  G V   G N
Sbjct: 2689 WTWGKGDYYRLGHGNDTH--VRKPQIVDGLRGKKIVDVAVGALHCLAVTDSGQVFAWGDN 2746

Query: 244  THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
             HGQ G+  T     P+ +  LE    + ++A G S+ +A
Sbjct: 2747 DHGQQGNNTTTVNRRPQLVNGLEG-QKITRVACGSSHSIA 2785


>gi|627469|pir||B38919 hypothetical protein 2 - human (fragment)
 gi|40788957|dbj|BAA04945.2| KIAA0032 [Homo sapiens]
          Length = 1054

 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 109/225 (48%), Gaps = 7/225 (3%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 47  GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 103

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 104 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 163

Query: 239 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 164 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 222

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG
Sbjct: 223 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSG 265



 Score = 90.1 bits (222), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 75/234 (32%), Positives = 113/234 (48%), Gaps = 7/234 (2%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 91  IHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 149

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 150 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 209

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 210 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 268

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYV 344
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +
Sbjct: 269 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLI 320



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/189 (30%), Positives = 101/189 (53%), Gaps = 10/189 (5%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N    +P  + AL    
Sbjct: 34  FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN----KPEQIGALADQH 89

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 90  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 148

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 149 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 206

Query: 336 VALDSSGYV 344
            AL  SG V
Sbjct: 207 FALSLSGAV 215



 Score = 72.4 bits (176), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 64/194 (32%), Positives = 95/194 (48%), Gaps = 6/194 (3%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++ G +H L L ++   F+ G +  G LG G E     S  R+       + QV+A  
Sbjct: 144 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGG 203

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG VF  G N++   G  D  +    P  V+ L+      ++ G   T  LT
Sbjct: 204 AHSFALSLSGAVFGWGMNNAGQLGLSD-EKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 262

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGNGVV 290
             G V T G+ + GQLGH    D   P+ +  LE +GS V QIA G  + LA V  +G++
Sbjct: 263 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLI 320

Query: 291 YSFGSGSNFCLGHG 304
           Y+FG G+   LG G
Sbjct: 321 YAFGCGARGQLGTG 334



 Score = 71.2 bits (173), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 83/165 (50%), Gaps = 25/165 (15%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 6   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 65

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           T GQLGH    ++P        E++G+     ++ +A G S+ LA++  G ++S+G+GS+
Sbjct: 66  TKGQLGHEREGNKP--------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD 117

Query: 299 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G
Sbjct: 118 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADG 160


>gi|270002031|gb|EEZ98478.1| hypothetical protein TcasGA2_TC000971 [Tribolium castaneum]
          Length = 4191

 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 75/233 (32%), Positives = 114/233 (48%), Gaps = 9/233 (3%)

Query: 115 QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA-SE 172
           Q+  G+Y T  I  + SV +CG    G LG G  + Q +   RI        +  S  S+
Sbjct: 383 QVEAGQYCTFAIHWDGSVSACGKGSYGRLGLGESSNQSLP-KRILLDCVVKKLSSSKGSD 441

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H   + ++G V++ GD      GH +        R+     G   K + AG   +  +T
Sbjct: 442 GHTLALAETGVVYSWGDGDYGKLGHGNCATHKQPERITGPFLGKTIKYIHAGYRHSAAVT 501

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-VVY 291
             G ++T G   HG+LGHGD+  R  P  +A L EVGSV   A G S+ L V+ +G  V+
Sbjct: 502 DDGKLYTWGEGDHGRLGHGDSNARYVPTQVAGLAEVGSV---ACGSSHTLVVSKDGKTVW 558

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           SFGSG +  LG GE     +P+ ++    +G+ + +V AG    +AL ++G V
Sbjct: 559 SFGSGEHGKLGTGELGKVYRPQVVEAL--QGLTIQKVCAGTWFSMALTTAGEV 609



 Score = 78.2 bits (191), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 70/246 (28%), Positives = 119/246 (48%), Gaps = 10/246 (4%)

Query: 107  VETSAGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV 165
            VE+ +   +I  G+  T +I S+ +V +CG    G LG G  +    S + I+      +
Sbjct: 3353 VESFSIARKIICGQNCTFVIQSDGTVLACGEGSYGRLGQG-NSDDLHSLSVISSLQGFVI 3411

Query: 166  VQVSAS---ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
              ++ S   + H+  + +SG+VF+ GD      GH + +R   RPR +EAL+     QV 
Sbjct: 3412 TDLATSVGSDGHSLALAESGEVFSWGDGDFGKLGHGNPDRQ-RRPRQIEALQTEQVVQVA 3470

Query: 223  AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
             G   +  +T  G + T G+   G+LG G   ++  P+ +  LE    + Q+A G ++  
Sbjct: 3471 CGFKHSAVVTSDGKLFTFGNGDFGKLGLGSVANKKLPERVMALEGY-RIGQVACGLNHTA 3529

Query: 283  AVTGNGV-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
             V+ +G+ V++FG G    LG G    +L P+ ++T    GI   +V  G    + L   
Sbjct: 3530 CVSTDGMTVWTFGEGDYGKLGLGYATMKLLPQKVETVCNLGIK--KVGCGTHLTLFLTKD 3587

Query: 342  GYVSLC 347
            G V +C
Sbjct: 3588 GKVFVC 3593



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 58/224 (25%), Positives = 103/224 (45%), Gaps = 12/224 (5%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   +  +  +++ G    G LGHG    +   +        A V  V+   +H   V 
Sbjct: 495 RHSAAVTDDGKLYTWGEGDHGRLGHGDSNAR---YVPTQVAGLAEVGSVACGSSHTLVVS 551

Query: 180 QSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
           + G+    F  G++     G       ++RP++VEAL+G+  ++V AG  F+  LT  G 
Sbjct: 552 KDGKTVWSFGSGEHGKLGTGELGK---VYRPQVVEALQGLTIQKVCAGTWFSMALTTAGE 608

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           V+T GS      G  D +    P  +  L +   +V I+AG ++ LA+T    V+++G+ 
Sbjct: 609 VYTWGSGAILGKGSADAIVN-LPMYVEDLAQY-RIVDISAGDNHCLALTDEHEVFAWGTN 666

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           S    G G     +  R ++    +G+ + ++SAG  H +A  S
Sbjct: 667 SMGQCGQGHTCSPIT-RPLKVIGLEGVSIRQISAGTSHSMAWTS 709



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 63/240 (26%), Positives = 98/240 (40%), Gaps = 16/240 (6%)

Query: 103 SSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA 162
            S I++  +G  +I +  +     S  SV+    +L  +L              I+F   
Sbjct: 281 KSAIMQLESGKYKIKSDLWKGQTSSEVSVYEAAINLMEILAG----------MAIDFGGV 330

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
              V+ + SE+    V +   V+  G NSS      +  + I  P  V++      +QV 
Sbjct: 331 CSAVE-TTSESEVG-VYEKSDVYVWGSNSSHQLAEGNQEK-ILMP--VKSKMFTQVQQVE 385

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
           AG   T  +   G V  CG  ++G+LG G++ ++  PK I     V  +        + L
Sbjct: 386 AGQYCTFAIHWDGSVSACGKGSYGRLGLGESSNQSLPKRILLDCVVKKLSSSKGSDGHTL 445

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           A+   GVVYS+G G    LGHG      QP  I T    G  +  + AG  H  A+   G
Sbjct: 446 ALAETGVVYSWGDGDYGKLGHGNCATHKQPERI-TGPFLGKTIKYIHAGYRHSAAVTDDG 504



 Score = 46.2 bits (108), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 56/227 (24%), Positives = 96/227 (42%), Gaps = 20/227 (8%)

Query: 115  QITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HT  +S    +V++ G    G LG G  T + +   ++       + +V    
Sbjct: 3520 QVACGLNHTACVSTDGMTVWTFGEGDYGKLGLGYATMKLLP-QKVETVCNLGIKKVGCGT 3578

Query: 173  NHAAFVLQSGQVFTCG-DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
            +   F+ + G+VF CG D   +    R+  R +F+P+++ +L     + +  G     FL
Sbjct: 3579 HLTLFLTKDGKVFVCGIDRMPWHSLFRE--RAVFKPQIMTSLSDYSIEDLAVGTEHVLFL 3636

Query: 232  TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA-------- 283
            T  G V   G    GQLG         P+ I  L + G + QI+ G ++  A        
Sbjct: 3637 TTCGKVLGWGMTGEGQLGLPHVSLVRHPEIITELSDKG-IRQISTGRTHSAAWSAPPLPQ 3695

Query: 284  -VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
             V G     +FG  +N       Q+D LQ  +I+  + + + + R S
Sbjct: 3696 RVPGVTRSLTFGLPANI----PSQYDHLQGLSIELIQARVMFLHRFS 3738


>gi|291296242|ref|YP_003507640.1| chromosome condensation regulator RCC1 [Meiothermus ruber DSM 1279]
 gi|290471201|gb|ADD28620.1| regulator of chromosome condensation RCC1 [Meiothermus ruber DSM
           1279]
          Length = 593

 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 78/227 (34%), Positives = 110/227 (48%), Gaps = 11/227 (4%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + +  GRYH+L L S  +V++ G +  G LG G  T    S   I  P  + V+ ++A +
Sbjct: 332 VAVQAGRYHSLALTSEGTVYAWGRNDVGQLGLGTITAPQESPALI--PGLSDVIALAAGD 389

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           +H   +   G V+  GDN +   G  D   P   P  V  L GV  K + AG N +  L 
Sbjct: 390 DHTLALKADGSVWAWGDNPNGELGTGDIT-PYSVPTAVSNLPGV--KAIAAGGNHSVALL 446

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G V T G N HGQLG+G   +   P    P+  +  VV IAAG  + LAV  NG V +
Sbjct: 447 ADGTVRTWGYNNHGQLGNGSNTNSNVP---VPVTGLTDVVGIAAGYEFTLAVLSNGSVKA 503

Query: 293 FGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           +G   +F LG+G    D+  P  +Q     G  V  ++AG  H +AL
Sbjct: 504 WGHDDSFQLGNGATTGDQTTPVDVQGI-PTGRSVRGLTAGIFHALAL 549



 Score = 67.8 bits (164), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 75/263 (28%), Positives = 113/263 (42%), Gaps = 37/263 (14%)

Query: 106 IVETSAGNMQITT---------------GRYHTLLISNSSVFSCGSSLCGVLGHG---PE 147
           IV+ S+GN+  T                G +   +  N  V+S G +  G LG     P 
Sbjct: 202 IVQASSGNLTRTAPLTLRVLRANTLAAGGYFSAAIKPNGQVWSWGDNTYGQLGRATTSPS 261

Query: 148 TTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG--DNSSFCCGHRDTN---- 201
            +     + IN       V +S  E HA  +   G+V T G  D      G  D++    
Sbjct: 262 DSTPTQASLIN-----DAVSISLGEYHAIALTNDGRVVTLGRDDYGQLGDGPGDSSGTHT 316

Query: 202 RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 261
            P  R  ++ A  G+    V AG   +  LT  G V+  G N  GQLG G T+  P  +S
Sbjct: 317 APNLRDNILPA--GIKAVAVQAGRYHSLALTSEGTVYAWGRNDVGQLGLG-TITAPQ-ES 372

Query: 262 IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 321
            A +  +  V+ +AAG  + LA+  +G V+++G   N  LG G    ++ P ++ T    
Sbjct: 373 PALIPGLSDVIALAAGDDHTLALKADGSVWAWGDNPNGELGTG----DITPYSVPTAVSN 428

Query: 322 GIHVVRVSAGDEHVVALDSSGYV 344
              V  ++AG  H VAL + G V
Sbjct: 429 LPGVKAIAAGGNHSVALLADGTV 451



 Score = 40.0 bits (92), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 63/147 (42%), Gaps = 6/147 (4%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+++ +V + G +  G LG+G  T   V            VV ++A       V
Sbjct: 439 GNHSVALLADGTVRTWGYNNHGQLGNGSNTNSNVPVPVTGL---TDVVGIAAGYEFTLAV 495

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK-GVPCKQVTAGLNFTGFLTIRGHV 237
           L +G V   G + SF  G+  T      P  V+ +  G   + +TAG+     L   G +
Sbjct: 496 LSNGSVKAWGHDDSFQLGNGATTGDQTTPVDVQGIPTGRSVRGLTAGIFHALALLDDGSM 555

Query: 238 HTCGSNTHGQLGHG--DTLDRPTPKSI 262
              GSN  GQLG G  ++ D   P SI
Sbjct: 556 VAWGSNVQGQLGDGTPNSSDTAKPVSI 582


>gi|24659266|gb|AAH38960.1| HERC3 protein [Homo sapiens]
          Length = 368

 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 110/227 (48%), Gaps = 7/227 (3%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK---PEQIGALADQHIIHVACGESHSLAL 99

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 239 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGV 263



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 75/234 (32%), Positives = 113/234 (48%), Gaps = 7/234 (2%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDRGQLFSWGAGSDGQLGL-MTTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYV 344
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLI 316



 Score = 72.4 bits (176), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 65/208 (31%), Positives = 100/208 (48%), Gaps = 6/208 (2%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++ G +H L L ++   F+ G +  G LG G E     S  R+       + QV+A  
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG VF  G N++   G  D  +    P  V+ L+      ++ G   T  LT
Sbjct: 200 AHSFALSLSGAVFGWGMNNAGQLGLSD-EKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGNGVV 290
             G V T G+ + GQLGH    D   P+ +  LE +GS V QIA G  + LA V  +G++
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTF 318
           Y+FG G+   LG G   +   P  ++ +
Sbjct: 317 YAFGCGARGQLGTGHTCNVKCPSPVKGY 344



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/160 (31%), Positives = 82/160 (51%), Gaps = 15/160 (9%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 303
           T GQLGH    ++  P+ I  L +   ++ +A G S+ LA++  G ++S+G+GS+  LG 
Sbjct: 62  TKGQLGHEREGNK--PEQIGALADQ-HIIHVACGESHSLALSDRGQLFSWGAGSDGQLGL 118

Query: 304 GEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
               D +  PR IQ   ++ I  ++VS G+ H +AL + G
Sbjct: 119 MTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADG 156


>gi|302804446|ref|XP_002983975.1| hypothetical protein SELMODRAFT_119181 [Selaginella moellendorffii]
 gi|300148327|gb|EFJ14987.1| hypothetical protein SELMODRAFT_119181 [Selaginella moellendorffii]
          Length = 435

 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 68/214 (31%), Positives = 106/214 (49%), Gaps = 8/214 (3%)

Query: 113 NMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            M    G ++  L    +V++ G    G LGHG    + +    +  P    +V VSA  
Sbjct: 138 QMASAGGLHNIALTEVGNVYTWGYGAFGALGHGSYERELLP-RLLEGPWKDRIVHVSAGG 196

Query: 173 NHAAFVLQSGQVFTCG-DNSSFCCGHRDTN----RPIFRPRLVEALKGVPCKQVTAGLNF 227
           +H+A V +SG+++T G D      GH + +      + RP  V+AL  VP   V  G  F
Sbjct: 197 SHSAAVTESGELYTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQALD-VPIASVYCGGFF 255

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           T  LT  G + + G N + +LGHG   +   PK +A LE+V ++VQ+A G  +  A+T +
Sbjct: 256 TMALTKSGQLWSWGGNANHELGHGTRANNWKPKVVAALEDV-TLVQVACGGFHAAALTQD 314

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 321
           G V ++G G N  LGHG   +  +P  ++    K
Sbjct: 315 GKVITWGYGGNGQLGHGTLENGKEPAIVEAMADK 348



 Score = 45.8 bits (107), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 57/132 (43%), Gaps = 3/132 (2%)

Query: 119 GRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 177
           G + T+ ++ S  ++S G +    LGHG                   +VQV+    HAA 
Sbjct: 252 GGFFTMALTKSGQLWSWGGNANHELGHGTRANNWKPKVVAALEDVT-LVQVACGGFHAAA 310

Query: 178 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
           + Q G+V T G   +   GH  T      P +VEA+    C  +  G  +T  +T  G +
Sbjct: 311 LTQDGKVITWGYGGNGQLGH-GTLENGKEPAIVEAMADKTCTYIACGPAWTAAITENGDL 369

Query: 238 HTCGSNTHGQLG 249
           +T G N   QLG
Sbjct: 370 YTWGKNRDYQLG 381



 Score = 43.9 bits (102), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 57/122 (46%), Gaps = 6/122 (4%)

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           VT GL F   L     V   G    G+LG     ++  P  + P   +  V   +AG  +
Sbjct: 91  VTCGL-FHSVLFAEQDVFVWGKGDGGRLGIDTEFNQYKP-YVNP--RIKRVQMASAGGLH 146

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            +A+T  G VY++G G+   LGHG    EL PR ++   +    +V VSAG  H  A+  
Sbjct: 147 NIALTEVGNVYTWGYGAFGALGHGSYERELLPRLLEGPWKD--RIVHVSAGGSHSAAVTE 204

Query: 341 SG 342
           SG
Sbjct: 205 SG 206


>gi|313221390|emb|CBY32143.1| unnamed protein product [Oikopleura dioica]
          Length = 560

 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 66/232 (28%), Positives = 114/232 (49%), Gaps = 10/232 (4%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-AS 171
           M IT G+Y T  ++SN +V + G    G LG+G   +       I FP+    +  S  S
Sbjct: 164 MSITAGQYCTFAVLSNGTVMANGKGSYGRLGNGASASSSSPIL-IEFPAPVRKILTSKGS 222

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           + H+  + ++GQ++T GD      GH D+      P+L+EAL          G   +  +
Sbjct: 223 DGHSMAIGKNGQIWTWGDGDYGKLGHGDSTTQK-SPKLIEALASRVIVDADCGHRHSAAV 281

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-VV 290
              GH++  G   +G+LG GD L R  P  +  + E   VV    G ++ + ++ +G  V
Sbjct: 282 CDAGHLYMWGEGDYGRLGLGDALQRSVPVQVPDIREASQVV---CGFNHTVVLSTDGRTV 338

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           +SFG+  N  LGHG+ + + +P+ I     +G+ + +++AG +   A+   G
Sbjct: 339 WSFGAAENGKLGHGDTNRQFRPKIIDAL--QGLTITQIAAGTQISAAVTREG 388



 Score = 54.7 bits (130), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 51/181 (28%), Positives = 84/181 (46%), Gaps = 11/181 (6%)

Query: 105 DIVETSAGNMQITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA 162
           DI E S    Q+  G  HT+++S    +V+S G++  G LGHG +T +      I+    
Sbjct: 314 DIREAS----QVVCGFNHTVVLSTDGRTVWSFGAAENGKLGHG-DTNRQFRPKIIDALQG 368

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
             + Q++A    +A V + G ++  G     C G+  ++     P++V  L G     + 
Sbjct: 369 LTITQIAAGTQISAAVTREGALYVWGFGP--CLGNGSSDETFMLPKVVRGLSGRVVIDIA 426

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYM 281
            G N    LT  G V T G+N +GQ G G  +   T P+ +  L   G + Q+ AG ++ 
Sbjct: 427 IGENHVVALTKDGLVFTWGNNQNGQCGTGSGMATYTSPQMVQGLHGAG-IQQVTAGTTHT 485

Query: 282 L 282
            
Sbjct: 486 F 486



 Score = 47.0 bits (110), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 40/164 (24%), Positives = 70/164 (42%), Gaps = 4/164 (2%)

Query: 183 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
           +VF  G NSS           +  PR +     V    +TAG   T  +   G V   G 
Sbjct: 130 EVFCWGSNSSQQLTDATPEDKLLYPRNLSVYGKV--MSITAGQYCTFAVLSNGTVMANGK 187

Query: 243 NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
            ++G+LG+G +    +P  I     V  ++       + +A+  NG ++++G G    LG
Sbjct: 188 GSYGRLGNGASASSSSPILIEFPAPVRKILTSKGSDGHSMAIGKNGQIWTWGDGDYGKLG 247

Query: 303 HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSL 346
           HG+   +  P+ I+    + I  V    G  H  A+  +G++ +
Sbjct: 248 HGDSTTQKSPKLIEALASRVI--VDADCGHRHSAAVCDAGHLYM 289


>gi|198421625|ref|XP_002120080.1| PREDICTED: similar to mCG130390, partial [Ciona intestinalis]
          Length = 1609

 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 68/232 (29%), Positives = 114/232 (49%), Gaps = 8/232 (3%)

Query: 115  QITTGRYHTLLISNSSV-FSCGSSLCGVLGHG--PETTQCVSFTRINFPSAAHVVQVSAS 171
            ++  G+  T +I+N+ V  SCG    G LG G   ++ +    + +       +   + S
Sbjct: 784  KVVCGQNCTFIINNNGVVLSCGEGSYGRLGQGNSDDSNRLTHISALQGFIVKQLATSTGS 843

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
            + HA  + ++G+VF+ GD      GH +++R   RPR +EAL+G    QV  G   +  +
Sbjct: 844  DGHAIALTENGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALRGQEVVQVACGFKHSAVV 902

Query: 232  TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT-GNGVV 290
            TI G + T G   +G+LGHG T ++  P+ +  LE    + Q+A G ++ + V+  N  V
Sbjct: 903  TIDGKLFTFGYGDYGRLGHGSTTNKKIPERVMALENY-IIGQVACGLNHTVIVSQDNLTV 961

Query: 291  YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            ++ G G    LG G    +  P  I+   R GI   ++S G +   AL   G
Sbjct: 962  WACGDGDYGKLGIGGTSAKTSPTKIEVLSRVGIK--KISCGAQFTAALTWDG 1011



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 75/279 (26%), Positives = 108/279 (38%), Gaps = 62/279 (22%)

Query: 125  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
            L  N  VFS G    G LGHG    Q     +I       VVQV+    H+A V   G++
Sbjct: 850  LTENGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALRGQEVVQVACGFKHSAVVTIDGKL 908

Query: 185  FTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG-HVHTCGS 242
            FT G       GH   TN+ I  P  V AL+     QV  GLN T  ++     V  CG 
Sbjct: 909  FTFGYGDYGRLGHGSTTNKKI--PERVMALENYIIGQVACGLNHTVIVSQDNLTVWACGD 966

Query: 243  NTHGQLGHGDTLDRPTPKSIAPLEEVG--------------------------------- 269
              +G+LG G T  + +P  I  L  VG                                 
Sbjct: 967  GDYGKLGIGGTSAKTSPTKIEVLSRVGIKKISCGAQFTAALTWDGKLFMFGQDRMCGNCE 1026

Query: 270  ------------------SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ 311
                               ++ I+ G  + +A+T  G+VY++GS ++  LG G  +   +
Sbjct: 1027 TRTSPSFNPQVVTALSSHHIIDISVGAEHTIALTSKGIVYTWGSNTDGQLGLGHTNHVQE 1086

Query: 312  PRAIQTFRRKGIHVVRVSAGDEHVVAL----DSSGYVSL 346
            P  +++   K I   ++SAG  H  A     D +G+  L
Sbjct: 1087 PTLVESLSGKNIR--QISAGRTHSAAWSCEHDDAGHTLL 1123



 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 56/172 (32%), Positives = 86/172 (50%), Gaps = 7/172 (4%)

Query: 115  QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HT+++S  N +V++CG    G LG G  T+   S T+I   S   + ++S   
Sbjct: 943  QVACGLNHTVIVSQDNLTVWACGDGDYGKLGIGG-TSAKTSPTKIEVLSRVGIKKISCGA 1001

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
               A +   G++F  G +    CG+ +T   P F P++V AL       ++ G   T  L
Sbjct: 1002 QFTAALTWDGKLFMFGQDR--MCGNCETRTSPSFNPQVVTALSSHHIIDISVGAEHTIAL 1059

Query: 232  TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            T +G V+T GSNT GQLG G T     P  +  L    ++ QI+AG ++  A
Sbjct: 1060 TSKGIVYTWGSNTDGQLGLGHTNHVQEPTLVESLSG-KNIRQISAGRTHSAA 1110



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 75/142 (52%), Gaps = 12/142 (8%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  P+L ++      ++V  G N T  +   G V +CG  ++G+LG G++ D      I+
Sbjct: 770 VLVPQLTKSFH--EARKVVCGQNCTFIINNNGVVLSCGEGSYGRLGQGNSDDSNRLTHIS 827

Query: 264 PLEEVGSVVQIAAGPS----YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
            L+  G +V+  A  +    + +A+T NG V+S+G G    LGHG    + +PR I+  R
Sbjct: 828 ALQ--GFIVKQLATSTGSDGHAIALTENGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALR 885

Query: 320 RKGIHVVRVSAGDEH--VVALD 339
             G  VV+V+ G +H  VV +D
Sbjct: 886 --GQEVVQVACGFKHSAVVTID 905


>gi|196005109|ref|XP_002112421.1| hypothetical protein TRIADDRAFT_56425 [Trichoplax adhaerens]
 gi|190584462|gb|EDV24531.1| hypothetical protein TRIADDRAFT_56425 [Trichoplax adhaerens]
          Length = 4625

 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 70/229 (30%), Positives = 108/229 (47%), Gaps = 9/229 (3%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+  +L SN  VFS G    G LGHG + +      +I       +V +S   +H+A +
Sbjct: 3866 GRHAMVLTSNFEVFSWGDGEDGKLGHGDKLSSETP-RKIEALLGKQIVHISCGSSHSAAI 3924

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-- 236
               G+++T G       GH D +    +P+L+EALK      V  G      L I     
Sbjct: 3925 TSKGELYTWGKGRYGRLGHGDGD-DCLKPKLLEALKSYKVIDVACGSGDAQTLAITDDDC 3983

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGS 295
            V + G   +G+LG G +     P  I  L  +G +V ++  G  + +A+T NG +Y++G 
Sbjct: 3984 VWSWGDGDYGKLGRGGSDGCKKPLRIESL--IGMAVCKVECGSQFSVALTKNGDLYTWGK 4041

Query: 296  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            G  + LGHG      +PR +     +G  +V V+AG  H VA   +G V
Sbjct: 4042 GDYYRLGHGTNDHVRRPRKVACL--QGKQIVTVAAGSLHCVACTDAGEV 4088



 Score = 79.0 bits (193), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 52/142 (36%), Positives = 76/142 (53%), Gaps = 9/142 (6%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
           P L+++L  +  K++ A +    +L +   G V++ GS   G+LGHGD   R  P+ +  
Sbjct: 502 PVLLDSLIDIKIKKIAANVEGEHYLALSSDGCVYSWGSGDGGRLGHGDI--RREPELVKE 559

Query: 265 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
           L     + QIA G +Y  AVT NG +Y++G GS   LGHG   D L P  +      G H
Sbjct: 560 LVN-KKITQIACGSTYSAAVTSNGELYTWGRGSYGRLGHGNSEDRLLPTLVAGL--SGSH 616

Query: 325 VVRVS--AGDEHVVALDSSGYV 344
           VV V+  +GD H +A+D  G V
Sbjct: 617 VVDVACGSGDAHTLAIDKDGIV 638



 Score = 77.8 bits (190), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 109/229 (47%), Gaps = 8/229 (3%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+   +     VFS G  + G LGHG  T++ +S T I    +  +V+++   +H+A V
Sbjct: 2965 GRHSLCITREGKVFSWGEGIDGKLGHGDVTSR-LSPTLIEALESKLIVEIACGSSHSAAV 3023

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
               G+++T G       GH D+ + +  P+ V+AL+      +  G     T  LT    
Sbjct: 3024 TADGELYTWGLGDYGRLGHGDS-KTLHIPKQVKALQDYKVIDIACGSRDAQTLALTDNNC 3082

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGS 295
            V + G    G+LG G +     P+ I  L   G  V +IA G  + LA++  G V+++G 
Sbjct: 3083 VWSWGDGDFGKLGRGGSEGCNIPQKIDAL--CGRDVCRIACGAQFSLALSTTGKVWTWGK 3140

Query: 296  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            G  + LGHG       P+ I+   +K   +  ++ G  H +A+  +G V
Sbjct: 3141 GDYYRLGHGNDSHYRSPQLIEGPLKKK-RITEIAVGALHCLAVTDTGEV 3188



 Score = 77.8 bits (190), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 53/167 (31%), Positives = 84/167 (50%), Gaps = 8/167 (4%)

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            G V++ G       GH D  R    P LV+ L      Q+  G  ++  +T  G ++T 
Sbjct: 531 DGCVYSWGSGDGGRLGHGDIRR---EPELVKELVNKKITQIACGSTYSAAVTSNGELYTW 587

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIA--AGPSYMLAVTGNGVVYSFGSGS 297
           G  ++G+LGHG++ DR  P  +A L   GS VV +A  +G ++ LA+  +G+V+S+G G 
Sbjct: 588 GRGSYGRLGHGNSEDRLLPTLVAGLS--GSHVVDVACGSGDAHTLAIDKDGIVWSWGDGD 645

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              LG G       P+ ++T +    ++V V  G +  VAL   G V
Sbjct: 646 YGKLGRGGSDCCKVPKVVETLKHHNKYIVNVLCGSQFSVALGKDGTV 692



 Score = 68.2 bits (165), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 107/240 (44%), Gaps = 22/240 (9%)

Query: 107 VETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-----PETTQCVSFTRINFPS 161
           ++  A N++   G ++  L S+  V+S GS   G LGHG     PE  + +   +I    
Sbjct: 513 IKKIAANVE---GEHYLALSSDGCVYSWGSGDGGRLGHGDIRREPELVKELVNKKI---- 565

Query: 162 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
                Q++    ++A V  +G+++T G  S    GH ++   +  P LV  L G     V
Sbjct: 566 ----TQIACGSTYSAAVTSNGELYTWGRGSYGRLGHGNSEDRLL-PTLVAGLSGSHVVDV 620

Query: 222 TAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGP 278
             G      L I   G V + G   +G+LG G +     PK +  L+     +V +  G 
Sbjct: 621 ACGSGDAHTLAIDKDGIVWSWGDGDYGKLGRGGSDCCKVPKVVETLKHHNKYIVNVLCGS 680

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            + +A+  +G V+++G    + LGHG       P+ ++       H+V ++ G  H +AL
Sbjct: 681 QFSVALGKDGTVWTWGKSDGYRLGHGTLDHVRYPKMVEGL--INYHIVDIAVGPSHCLAL 738



 Score = 68.2 bits (165), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 72/138 (52%), Gaps = 5/138 (3%)

Query: 204  IFRPRLVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 261
            I  P ++E L+ +  ++++  +G      LT    V + G    G+LGHGD L   TP+ 
Sbjct: 3843 IVTPVIIEPLQHLKIEKLSVHSGGRHAMVLTSNFEVFSWGDGEDGKLGHGDKLSSETPRK 3902

Query: 262  IAPLEEVGS-VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR 320
            I  L  +G  +V I+ G S+  A+T  G +Y++G G    LGHG+  D L+P+ ++  + 
Sbjct: 3903 IEAL--LGKQIVHISCGSSHSAAITSKGELYTWGKGRYGRLGHGDGDDCLKPKLLEALKS 3960

Query: 321  KGIHVVRVSAGDEHVVAL 338
              +  V   +GD   +A+
Sbjct: 3961 YKVIDVACGSGDAQTLAI 3978



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 89/195 (45%), Gaps = 26/195 (13%)

Query: 115 QITTGR-YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS--AS 171
           QI  G  Y   + SN  +++ G    G LGHG    + +  T +   S +HVV V+  + 
Sbjct: 567 QIACGSTYSAAVTSNGELYTWGRGSYGRLGHGNSEDRLLP-TLVAGLSGSHVVDVACGSG 625

Query: 172 ENHAAFVLQSGQVFTCGDNS--------SFCCGHRDTNRPIFRPRLVEALK--GVPCKQV 221
           + H   + + G V++ GD          S CC           P++VE LK        V
Sbjct: 626 DAHTLAIDKDGIVWSWGDGDYGKLGRGGSDCCK---------VPKVVETLKHHNKYIVNV 676

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSY 280
             G  F+  L   G V T G +   +LGHG TLD    PK +  L     +V IA GPS+
Sbjct: 677 LCGSQFSVALGKDGTVWTWGKSDGYRLGHG-TLDHVRYPKMVEGLINY-HIVDIAVGPSH 734

Query: 281 MLAVTGNGVVYSFGS 295
            LA+T N  ++++GS
Sbjct: 735 CLALTDNCQIFTWGS 749



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 65/152 (42%), Gaps = 3/152 (1%)

Query: 118  TGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL I++   V+S G    G LG G  +  C    RI       V +V      + 
Sbjct: 3970 SGDAQTLAITDDDCVWSWGDGDYGKLGRGG-SDGCKKPLRIESLIGMAVCKVECGSQFSV 4028

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + ++G ++T G    +  GH  TN  + RPR V  L+G     V AG       T  G 
Sbjct: 4029 ALTKNGDLYTWGKGDYYRLGH-GTNDHVRRPRKVACLQGKQIVTVAAGSLHCVACTDAGE 4087

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 268
            V T G N  GQLG+G     P P  +  LE V
Sbjct: 4088 VFTWGDNDEGQLGNGTLNPIPEPTLVTVLENV 4119



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 60/134 (44%), Gaps = 6/134 (4%)

Query: 210  VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE-EV 268
            + AL+ V    +  G      +T  G V+  G   +G+LG G+T +   P  +  L    
Sbjct: 2899 IAALRPV---SIAGGSKTVFIVTYDGKVYVSGEGANGRLGLGNTENISIPVQLDTLNMHF 2955

Query: 269  GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 328
               V +  G  + L +T  G V+S+G G +  LGHG+    L P  I+    K I  V +
Sbjct: 2956 VKKVTVHPGGRHSLCITREGKVFSWGEGIDGKLGHGDVTSRLSPTLIEALESKLI--VEI 3013

Query: 329  SAGDEHVVALDSSG 342
            + G  H  A+ + G
Sbjct: 3014 ACGSSHSAAVTADG 3027


>gi|297797389|ref|XP_002866579.1| UVB-resistance 8 [Arabidopsis lyrata subsp. lyrata]
 gi|297312414|gb|EFH42838.1| UVB-resistance 8 [Arabidopsis lyrata subsp. lyrata]
          Length = 440

 Score = 92.0 bits (227), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 71/229 (31%), Positives = 116/229 (50%), Gaps = 7/229 (3%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I+ G  H++ L+S   V S G    G LGHG +     S T+++      +V V+   +H
Sbjct: 20  ISAGASHSVALLSGDIVCSWGRGEDGQLGHG-DAEDRPSPTQLSALDGHQIVSVTCGADH 78

Query: 175 AAFVLQSG-QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
                QSG +V++ G       GH +++  +F P  ++AL G+  KQ+  G +    +T+
Sbjct: 79  TVAYSQSGMEVYSWGWGDFGRLGHGNSSD-LFTPLPIKALHGIRIKQIACGDSHCLAVTM 137

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V + G N +GQLG GDT D   P+ I   E +  +  +AAG  +  AVT +G +Y +
Sbjct: 138 EGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGI-RIKMVAAGAEHTAAVTEDGDLYGW 196

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           G G    LG G+++D L P  + +    G  +  V+ G  H +++  SG
Sbjct: 197 GWGRYGNLGLGDRNDRLVPERVTS--AGGEKMSMVACGWRHTISVSYSG 243



 Score = 81.6 bits (200), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 65/180 (36%), Positives = 90/180 (50%), Gaps = 7/180 (3%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTA 223
           V+ +SA  +H+  +L    V + G       GH D  +RP   P  + AL G     VT 
Sbjct: 17  VLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRP--SPTQLSALDGHQIVSVTC 74

Query: 224 GLNFTGFLTIRG-HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
           G + T   +  G  V++ G    G+LGHG++ D  TP  I  L  +  + QIA G S+ L
Sbjct: 75  GADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGI-RIKQIACGDSHCL 133

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           AVT  G V S+G   N  LG G+  D L P+ IQ F  +GI +  V+AG EH  A+   G
Sbjct: 134 AVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAF--EGIRIKMVAAGAEHTAAVTEDG 191



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/209 (28%), Positives = 95/209 (45%), Gaps = 6/209 (2%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HT  ++ +  ++  G    G LG G    + V   R+       +  V+    H
Sbjct: 177 VAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLVP-ERVTSAGGEKMSMVACGWRH 235

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V  SG ++T G +     GH D    +  P  +EAL      Q++ G   T  LT  
Sbjct: 236 TISVSYSGALYTYGWSKYGQLGHGDLEDHLI-PHKLEALSNSFISQISGGWRHTMALTSD 294

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
           G ++  G N  GQ+G G+ LD+ +P  +  P ++   VVQ++ G  + LAVT    V+++
Sbjct: 295 GKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQ--KVVQVSCGWRHTLAVTERNNVFAW 352

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           G G+N  LG GE  D   P+ I+     G
Sbjct: 353 GRGTNGQLGIGESVDRNFPKIIEALSVDG 381



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 51/172 (29%), Positives = 82/172 (47%), Gaps = 12/172 (6%)

Query: 109 TSAGNMQITT---GRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH 164
           TSAG  +++    G  HT+ +S S ++++ G S  G LGHG      +   ++   S + 
Sbjct: 219 TSAGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPH-KLEALSNSF 277

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCG---HRDTNRPIFRPRLVEALKGVPCKQV 221
           + Q+S    H   +   G+++  G N     G   + D   P+ + R  +  K V   QV
Sbjct: 278 ISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPV-QVRFPDDQKVV---QV 333

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           + G   T  +T R +V   G  T+GQLG G+++DR  PK I  L   G+  Q
Sbjct: 334 SCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALSVDGASGQ 385



 Score = 42.0 bits (97), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 2/73 (2%)

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
           +V+ I+AG S+ +A+    +V S+G G +  LGHG+  D   P  +      G  +V V+
Sbjct: 16  TVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSAL--DGHQIVSVT 73

Query: 330 AGDEHVVALDSSG 342
            G +H VA   SG
Sbjct: 74  CGADHTVAYSQSG 86


>gi|326664251|ref|XP_688463.5| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Danio rerio]
          Length = 992

 Score = 92.0 bits (227), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 58/178 (32%), Positives = 90/178 (50%), Gaps = 3/178 (1%)

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
            V+Q++  + H+  +   GQ+F  G+N+    G R        PR +++L G+P  Q++A
Sbjct: 119 QVIQIACGDQHSMALTNDGQLFVWGENALGQLGLRKEQAGTQSPRHLQSLCGIPVAQISA 178

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G N +  L++ G V   G N+ GQLG GDT DR  P  +  L+    +V I+ G  +  A
Sbjct: 179 GGNHSFVLSLSGVVFGWGGNSAGQLGLGDTTDRFVPTVVNSLKR-KKIVSISCGGEHTAA 237

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           +   G V++FGSG    LGH    DE  PR +      G  V +V+ G  H +   +S
Sbjct: 238 LAKGGTVFTFGSGGFGQLGHNSFKDEHHPRLVAELW--GSKVSQVTCGRNHTLVSTAS 293



 Score = 77.4 bits (189), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 74/230 (32%), Positives = 105/230 (45%), Gaps = 8/230 (3%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QI  G  H++ ++N   +F  G +  G LG   E     S   +       V Q+SA  
Sbjct: 121 IQIACGDQHSMALTNDGQLFVWGENALGQLGLRKEQAGTQSPRHLQSLCGIPVAQISAGG 180

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           NH+  +  SG VF  G NS+   G  DT    F P +V +LK      ++ G   T  L 
Sbjct: 181 NHSFVLSLSGVVFGWGGNSAGQLGLGDTTDR-FVPTVVNSLKRKKIVSISCGGEHTAALA 239

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLAVTGN-GVV 290
             G V T GS   GQLGH    D   P+ +A L   GS V Q+  G ++ L  T +  ++
Sbjct: 240 KGGTVFTFGSGGFGQLGHNSFKDEHHPRLVAEL--WGSKVSQVTCGRNHTLVSTASPKLI 297

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ--TFRRKGIHVVRVSAGDEHVVAL 338
           YSFG G    LG+GEQ  +  P  +   T       + ++ AG+ H  AL
Sbjct: 298 YSFGCGMQGQLGNGEQVKQSVPLPVDQPTEYNDEYTIQKLVAGENHSFAL 347


>gi|301615126|ref|XP_002937025.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC2-like [Xenopus (Silurana) tropicalis]
          Length = 4845

 Score = 92.0 bits (227), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 84/304 (27%), Positives = 140/304 (46%), Gaps = 24/304 (7%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P +  +L +L  +Q+      +  +SRN +  L  +   N     + +Q +  S +IV+ 
Sbjct: 442 PIQCEALANLGVTQVACAEKCFLILSRNGK--LYTQAYNNNTLGPQLVQGLA-SRNIVKI 498

Query: 110 SAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA------- 162
           +A       G+++  L + S +FS G    G LGHG      VS       SA       
Sbjct: 499 AAH----PDGQHYLALSATSELFSWGCGDGGRLGHG----DTVSLEEPKLVSALSGKQTG 550

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
             V+ ++    ++A +   G+++T G  +    GH  +      P LV  LKG+    V+
Sbjct: 551 KQVIHIACGSTYSAAITADGELYTWGRGNYGRLGHGSSEDQTV-PMLVTGLKGLKVVDVS 609

Query: 223 AGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
            G      L++   G V + G   +G+LG G +    TPK I  L+++  +V++  G  +
Sbjct: 610 CGSGDAQTLSVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DIVKVRCGSQF 668

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            +A+T +G VYS+G G N  LGHG +     P+ +     +G  VV V+ G  H +AL  
Sbjct: 669 SIAITKDGQVYSWGKGDNQRLGHGTEEHVRYPKIMNGL--QGKKVVDVAVGSTHCLALTE 726

Query: 341 SGYV 344
           SG V
Sbjct: 727 SGEV 730



 Score = 87.8 bits (216), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 74/251 (29%), Positives = 118/251 (47%), Gaps = 12/251 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4043 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4096

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV ++A   H+A +  +G+++T G       GH D+   + +P+LVEAL+G
Sbjct: 4097 VIESLRGTEVVDIAAGGAHSACITAAGELYTWGKGRYGRLGHGDSEDQL-KPKLVEALQG 4155

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  VG V +
Sbjct: 4156 YRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGVG-VTK 4214

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4215 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4272

Query: 334  HVVALDSSGYV 344
            H V     G V
Sbjct: 4273 HCVCCTEDGEV 4283



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 68/226 (30%), Positives = 111/226 (49%), Gaps = 12/226 (5%)

Query: 125  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQS 181
            + +   V++CG +  G LG G  ++  V   R     + +VV+   V +   HA  +   
Sbjct: 3011 VTAEGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSNYVVKKVAVHSGGRHATALTVD 3069

Query: 182  GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 241
            G+VF+ G+      GH  +     +PRL+EALK    + +  G + +  +T  G ++T G
Sbjct: 3070 GKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWG 3128

Query: 242  SNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSN 298
               +G+LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G  
Sbjct: 3129 LGEYGRLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3186

Query: 299  FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              LG G       P+ I+  R  G  V ++  G +  +AL  SG V
Sbjct: 3187 GKLGRGGSEGCNIPQNIE--RLNGQAVCQIECGAQFSLALTKSGVV 3230



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 91/190 (47%), Gaps = 11/190 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2994 SALNVVQVAGGSKSLFAVTAEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSNYVV 3051

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L +   +  IA 
Sbjct: 3052 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL-KTKRIRDIAC 3110

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3111 GSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3168

Query: 335  VVALDSSGYV 344
             +AL   G V
Sbjct: 3169 TLALTDEGLV 3178



 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 53/177 (29%), Positives = 83/177 (46%), Gaps = 5/177 (2%)

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF--V 178
           Y   + ++  +++ G    G LGHG    Q V            VV VS     A    V
Sbjct: 562 YSAAITADGELYTWGRGNYGRLGHGSSEDQTVPMLVTGL-KGLKVVDVSCGSGDAQTLSV 620

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
            ++GQV++ GD      G R  +     P+L+E L+ +   +V  G  F+  +T  G V+
Sbjct: 621 TENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIAITKDGQVY 679

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
           + G   + +LGHG       PK +  L+    VV +A G ++ LA+T +G VYS+GS
Sbjct: 680 SWGKGDNQRLGHGTEEHVRYPKIMNGLQG-KKVVDVAVGSTHCLALTESGEVYSWGS 735



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 54/177 (30%), Positives = 81/177 (45%), Gaps = 5/177 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3060 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAI 3118

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3119 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3177

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            V + G    G+LG G +     P++I  L    +V QI  G  + LA+T +GVV+++
Sbjct: 3178 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNG-QAVCQIECGAQFSLALTKSGVVWTW 3233



 Score = 61.2 bits (147), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 50/162 (30%), Positives = 76/162 (46%), Gaps = 5/162 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T  G V+ CG 
Sbjct: 2964 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTAEGKVYACGE 3022

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3023 ATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3082

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            LGH  + +  +PR I+  + K I    ++ G  H  A+ SSG
Sbjct: 3083 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAAITSSG 3122



 Score = 54.3 bits (129), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 75/167 (44%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   V +V      + 
Sbjct: 4165 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGVGVTKVECGSQFSV 4223

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4224 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4282

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    + ++A G ++ LA
Sbjct: 4283 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKINRVACGSAHTLA 4328



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/130 (33%), Positives = 60/130 (46%), Gaps = 10/130 (7%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG--HGDTLDRPT-PKSIAPLEEVGSVVQIA 275
            ++ TAGL  T   TIR  V   G N   QLG   G  +  P+  ++++ L    +VVQ+A
Sbjct: 2949 RKKTAGLESTA--TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSAL----NVVQVA 3002

Query: 276  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEH 334
             G   + AVT  G VY+ G  +N  LG G     +  PR I       +  V V +G  H
Sbjct: 3003 GGSKSLFAVTAEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRH 3062

Query: 335  VVALDSSGYV 344
              AL   G V
Sbjct: 3063 ATALTVDGKV 3072



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 51/181 (28%), Positives = 80/181 (44%), Gaps = 13/181 (7%)

Query: 106 IVETSAGNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH 164
           +V+ S G     +G   TL ++ N  V+S G    G LG G  +  C +   I       
Sbjct: 605 VVDVSCG-----SGDAQTLSVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLD 658

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +V+V      +  + + GQV++ G   +   GH  T   +  P+++  L+G     V  G
Sbjct: 659 IVKVRCGSQFSIAITKDGQVYSWGKGDNQRLGH-GTEEHVRYPKIMNGLQGKKVVDVAVG 717

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD--RPTPKSIAPLEEVGSVVQIAAGPSYML 282
                 LT  G V++ GSN   Q  H DTL   +P P S+ P  +   +V I+ GP+   
Sbjct: 718 STHCLALTESGEVYSWGSNDQCQ--HFDTLRIAKPVP-SVLPGLDSKHIVGISCGPAQSF 774

Query: 283 A 283
           A
Sbjct: 775 A 775



 Score = 45.8 bits (107), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 66/137 (48%), Gaps = 3/137 (2%)

Query: 207  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            P   EAL  +   Q+  G      +T  G ++  G    G+LG G T    TP  +  ++
Sbjct: 3989 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQ 4048

Query: 267  EVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
             V    V + +G  + LA++  G VYS+G   +  LGHG +    +PR I++ R  G  V
Sbjct: 4049 HVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLR--GTEV 4106

Query: 326  VRVSAGDEHVVALDSSG 342
            V ++AG  H   + ++G
Sbjct: 4107 VDIAAGGAHSACITAAG 4123



 Score = 41.2 bits (95), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 7/113 (6%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3965 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4020

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G V
Sbjct: 4021 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4073


>gi|390359737|ref|XP_003729552.1| PREDICTED: E3 ubiquitin-protein ligase HERC2, partial
            [Strongylocentrotus purpuratus]
          Length = 4064

 Score = 92.0 bits (227), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 115/252 (45%), Gaps = 14/252 (5%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSF 154
             L+S++H           + + +G  H L +S    V+S G    G LGHG   TQC   
Sbjct: 3259 LLESIQH------VHIKKVAVNSGGKHALALSVEGEVYSWGEGEDGKLGHG-NRTQCDRP 3311

Query: 155  TRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK 214
              I       V+ ++    H+A V  SG+++T G       GH D+   + RP++ +ALK
Sbjct: 3312 RVIESLRGKEVIDIACGGAHSACVTSSGELYTWGKGRYGRLGHGDSEDQL-RPKMADALK 3370

Query: 215  GVPCKQVTAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
            G     V  G   +  L I    +V + G   +G+LG G +     P+ +  L  +G V 
Sbjct: 3371 GYRVIDVACGSGDSQTLCISDDDNVWSWGDGDYGKLGRGGSDGCKVPQKVDALSSIG-VC 3429

Query: 273  QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
            ++  G  + +A+T +G VY++G G    LGHG      +PR +     +G  ++ ++ G 
Sbjct: 3430 KVECGSQFSIALTKSGCVYTWGKGDYHRLGHGSDDHVRRPRKVAAL--QGKKIISIATGS 3487

Query: 333  EHVVALDSSGYV 344
             H VA    G V
Sbjct: 3488 LHCVACSDQGEV 3499



 Score = 88.6 bits (218), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 69/228 (30%), Positives = 106/228 (46%), Gaps = 7/228 (3%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+   L  +  VFS G    G LGH      C     +       +  ++   +H+A V
Sbjct: 2302 GRHAMALTVDGKVFSWGEGDDGKLGH-LSRMNCEKPRLLEALKTKRIRDIACGSSHSAAV 2360

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI--RGH 236
              SG+++T G       GH D+   + RP+LV+AL G    QV  G      LT+   G 
Sbjct: 2361 TSSGELYTWGLGEYGRLGHGDSTTQL-RPKLVKALVGKRVIQVACGSRDAQTLTLTDEGM 2419

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V++ G    G+LG G +     P ++  L   G V+QI  G  + LA+T  G V+++G G
Sbjct: 2420 VYSWGDGDFGKLGRGGSEGCSVPHNVERLNGQG-VIQIECGAQFSLALTKAGQVWTWGKG 2478

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              F LGHG      +P+  +    KG  ++ V+ G  H +A+  +G V
Sbjct: 2479 DYFRLGHGTDSHVRKPQVAEGL--KGKKIIHVAVGALHCLAVTDTGQV 2524



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 112/227 (49%), Gaps = 13/227 (5%)

Query: 124  LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQ 180
            ++ +   V++CG    G LG G  ++Q V   +     + +VV+   V +   HA  +  
Sbjct: 2253 VVTAEGKVYACGEGTNGRLGLG--SSQNVDIPKQVNGLSQYVVKKVAVHSGGRHAMALTV 2310

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
             G+VF+ G+      GH  +     +PRL+EALK    + +  G + +  +T  G ++T 
Sbjct: 2311 DGKVFSWGEGDDGKLGHL-SRMNCEKPRLLEALKTKRIRDIACGSSHSAAVTSSGELYTW 2369

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAG--PSYMLAVTGNGVVYSFGSGS 297
            G   +G+LGHGD+  +  PK +  L  VG  V+Q+A G   +  L +T  G+VYS+G G 
Sbjct: 2370 GLGEYGRLGHGDSTTQLRPKLVKAL--VGKRVIQVACGSRDAQTLTLTDEGMVYSWGDGD 2427

Query: 298  NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
               LG G       P  ++  R  G  V+++  G +  +AL  +G V
Sbjct: 2428 FGKLGRGGSEGCSVPHNVE--RLNGQGVIQIECGAQFSLALTKAGQV 2472



 Score = 72.4 bits (176), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 69/243 (28%), Positives = 112/243 (46%), Gaps = 14/243 (5%)

Query: 109  TSAGNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV-- 165
            TS   +QI  G      ++ +  +++ G    G LG G   T  VS T     S  HV  
Sbjct: 3212 TSLRPIQIVGGEQTLFAVTADGKLYATGYGASGRLGIG--GTDSVS-TPTLLESIQHVHI 3268

Query: 166  --VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
              V V++   HA  +   G+V++ G+      GH +  +   RPR++E+L+G     +  
Sbjct: 3269 KKVAVNSGGKHALALSVEGEVYSWGEGEDGKLGHGNRTQ-CDRPRVIESLRGKEVIDIAC 3327

Query: 224  GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYM 281
            G   +  +T  G ++T G   +G+LGHGD+ D+  PK    L+    V+ +A  +G S  
Sbjct: 3328 GGAHSACVTSSGELYTWGKGRYGRLGHGDSEDQLRPKMADALKGY-RVIDVACGSGDSQT 3386

Query: 282  LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
            L ++ +  V+S+G G    LG G       P+ +       I V +V  G +  +AL  S
Sbjct: 3387 LCISDDDNVWSWGDGDYGKLGRGGSDGCKVPQKVDAL--SSIGVCKVECGSQFSIALTKS 3444

Query: 342  GYV 344
            G V
Sbjct: 3445 GCV 3447



 Score = 64.7 bits (156), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 57/219 (26%), Positives = 99/219 (45%), Gaps = 5/219 (2%)

Query: 128  NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
             + VF  G +    LG GP  ++  +     F S+  VV  +        V   G+V+ C
Sbjct: 2205 QTKVFVWGLNDKDQLG-GPRGSKIKTPVLNEFLSSLKVVCCAGGSKSLFVVTAEGKVYAC 2263

Query: 188  GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTH 245
            G+ ++   G   +++ +  P+ V  L     K+V   +G      LT+ G V + G    
Sbjct: 2264 GEGTNGRLG-LGSSQNVDIPKQVNGLSQYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDD 2322

Query: 246  GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
            G+LGH   ++   P+ +  L +   +  IA G S+  AVT +G +Y++G G    LGHG+
Sbjct: 2323 GKLGHLSRMNCEKPRLLEAL-KTKRIRDIACGSSHSAAVTSSGELYTWGLGEYGRLGHGD 2381

Query: 306  QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
               +L+P+ ++    K +  V   + D   + L   G V
Sbjct: 2382 STTQLRPKLVKALVGKRVIQVACGSRDAQTLTLTDEGMV 2420



 Score = 64.7 bits (156), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 98/225 (43%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  +++S  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 2350 IACGSSHSAAVTSSGELYTWGLGEYGRLGHGDSTTQ-LRPKLVKALVGKRVIQVACGSRD 2408

Query: 175  AAFVL--QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A  +     G V++ GD      G R  +     P  VE L G    Q+  G  F+  LT
Sbjct: 2409 AQTLTLTDEGMVYSWGDGDFGKLG-RGGSEGCSVPHNVERLNGQGVIQIECGAQFSLALT 2467

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG       P+ +A   +   ++ +A G  + LAVT  G V++
Sbjct: 2468 KAGQVWTWGKGDYFRLGHGTDSHVRKPQ-VAEGLKGKKIIHVAVGALHCLAVTDTGQVFA 2526

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G G      +P  +Q    +G+ + RV+ G  H  A
Sbjct: 2527 WGDNDHGQQGDGSTTVNKKPALVQGL--EGVRITRVACGSSHSTA 2569



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 86/177 (48%), Gaps = 5/177 (2%)

Query: 167  QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
            Q SA ++  +  +Q+ +VF  G N     G    ++ I  P L E L  +       G  
Sbjct: 2192 QRSAGDHGGSREIQT-KVFVWGLNDKDQLGGPRGSK-IKTPVLNEFLSSLKVVCCAGGSK 2249

Query: 227  FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVT 285
                +T  G V+ CG  T+G+LG G + +   PK +  L + V   V + +G  + +A+T
Sbjct: 2250 SLFVVTAEGKVYACGEGTNGRLGLGSSQNVDIPKQVNGLSQYVVKKVAVHSGGRHAMALT 2309

Query: 286  GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
             +G V+S+G G +  LGH  + +  +PR ++  + K I    ++ G  H  A+ SSG
Sbjct: 2310 VDGKVFSWGEGDDGKLGHLSRMNCEKPRLLEALKTKRIR--DIACGSSHSAAVTSSG 2364



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 67/137 (48%), Gaps = 3/137 (2%)

Query: 207  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            P  +E+L  +   Q+  G      +T  G ++  G    G+LG G T    TP  +  ++
Sbjct: 3205 PTAIESLTSLRPIQIVGGEQTLFAVTADGKLYATGYGASGRLGIGGTDSVSTPTLLESIQ 3264

Query: 267  EVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
             V    V + +G  + LA++  G VYS+G G +  LGHG +    +PR I++ R  G  V
Sbjct: 3265 HVHIKKVAVNSGGKHALALSVEGEVYSWGEGEDGKLGHGNRTQCDRPRVIESLR--GKEV 3322

Query: 326  VRVSAGDEHVVALDSSG 342
            + ++ G  H   + SSG
Sbjct: 3323 IDIACGGAHSACVTSSG 3339



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 77/167 (46%), Gaps = 4/167 (2%)

Query: 118  TGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL IS+  +V+S G    G LG G  +  C    +++  S+  V +V      + 
Sbjct: 3381 SGDSQTLCISDDDNVWSWGDGDYGKLGRG-GSDGCKVPQKVDALSSIGVCKVECGSQFSI 3439

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V AL+G     +  G       + +G 
Sbjct: 3440 ALTKSGCVYTWGKGDYHRLGHGSDDH-VRRPRKVAALQGKKIISIATGSLHCVACSDQGE 3498

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +  L++   +  +A G ++ +A
Sbjct: 3499 VYTWGDNDEGQLGDGTTNAIQRPRIVTALQD-KKITNVACGSAHTVA 3544



 Score = 41.2 bits (95), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 56/131 (42%), Gaps = 12/131 (9%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVGSVVQI-- 274
            +Q +AG +  G   I+  V   G N   QLG   G  +  P       L E  S +++  
Sbjct: 2191 RQRSAG-DHGGSREIQTKVFVWGLNDKDQLGGPRGSKIKTPV------LNEFLSSLKVVC 2243

Query: 275  -AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
             A G   +  VT  G VY+ G G+N  LG G   +   P+ +    +  +  V V +G  
Sbjct: 2244 CAGGSKSLFVVTAEGKVYACGEGTNGRLGLGSSQNVDIPKQVNGLSQYVVKKVAVHSGGR 2303

Query: 334  HVVALDSSGYV 344
            H +AL   G V
Sbjct: 2304 HAMALTVDGKV 2314



 Score = 39.7 bits (91), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 3/94 (3%)

Query: 255 DRPTPKSIAPLEEVGSV-VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPR 313
           D+ TPK ++ L+E   V + + +     LAVT  G+++SFG+G    LG G       P+
Sbjct: 4   DQLTPKLVSGLKEQKFVHIALGSNDGQTLAVTDTGLLFSFGNGDYGKLGRGGSDGCKLPK 63

Query: 314 AIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSLC 347
            +     +G H V    G++  V L  +G V  C
Sbjct: 64  LVDKL--QGQHAVIACCGNQFSVILTKTGTVYTC 95


>gi|224043006|ref|XP_002197493.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Taeniopygia guttata]
          Length = 4839

 Score = 92.0 bits (227), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 69/237 (29%), Positives = 113/237 (47%), Gaps = 17/237 (7%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 169
           + G ++  L +N  VFS G    G LGHG       P+    +S  +    +  HVV ++
Sbjct: 503 SDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQ----AGKHVVHIA 558

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V+ G     
Sbjct: 559 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTI-PMLVTGLKGLKVIDVSCGSGDAQ 617

Query: 230 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
            L +   G V + G   +G+LG G +    TPK I  L+++  +V++  G  + +A+T +
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DIVKVRCGSQFSIALTKD 676

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G VY++G G N  LGHG +     P+ ++    KG  V+ V+AG  H +AL     V
Sbjct: 677 GQVYTWGKGDNQRLGHGTEEHVRYPKLLEGL--KGKKVIDVAAGSTHCLALTEDSEV 731



 Score = 87.8 bits (216), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 74/252 (29%), Positives = 116/252 (46%), Gaps = 14/252 (5%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSF 154
             L+S++H           + + +G  H L +S    V+S G +  G LGHG   + C   
Sbjct: 4035 LLESIQH------VFIKKVAVNSGGKHCLALSFEGEVYSWGEAEDGKLGHG-NRSPCDRP 4087

Query: 155  TRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK 214
              I       VV ++A   H+A +  +G +FT G       GH D+   + +P+LVEAL+
Sbjct: 4088 RVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQL-KPKLVEALQ 4146

Query: 215  GVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
            G     +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV
Sbjct: 4147 GYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VV 4205

Query: 273  QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
            ++  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G 
Sbjct: 4206 KVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGS 4263

Query: 333  EHVVALDSSGYV 344
             H V     G V
Sbjct: 4264 LHCVCCTEDGEV 4275



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 71/228 (31%), Positives = 106/228 (46%), Gaps = 7/228 (3%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+   L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3060 GRHAMALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAI 3118

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3119 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3177

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3178 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3236

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G V
Sbjct: 3237 DYFRLGHGTDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDTGQV 3282



 Score = 77.4 bits (189), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 68/221 (30%), Positives = 109/221 (49%), Gaps = 12/221 (5%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFT 186
             V++CG +  G LG G  ++  V   R     + +VV+   V +   HA  +   G+VF+
Sbjct: 3016 KVYACGEATNGRLGLGI-SSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFS 3074

Query: 187  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
             G+      GH  +     +PRL+EALK    + +  G + +  +T  G ++T G   +G
Sbjct: 3075 WGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYG 3133

Query: 247  QLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGH 303
            +LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG 
Sbjct: 3134 RLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGR 3191

Query: 304  GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            G       P+ I+  R  G  V ++  G +  +AL  SG V
Sbjct: 3192 GGSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVV 3230



 Score = 74.7 bits (182), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 60/187 (32%), Positives = 96/187 (51%), Gaps = 20/187 (10%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V+QV+ +E     + ++G+V+T   NS       DT      P+LV++L      ++ A 
Sbjct: 454 VMQVACAEKRFLILSRNGRVYTQAYNS-------DT----LGPQLVQSLASRNIVKIAAH 502

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V + G    G+LGHGDT+    PK I+ L  ++ G  VV IA G +
Sbjct: 503 SDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVHIACGST 562

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   D+  P  +     KG+ V+ VS  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGL--KGLKVIDVSCGSGDAQTLA 620

Query: 338 LDSSGYV 344
           +  +G V
Sbjct: 621 VTENGQV 627



 Score = 68.2 bits (165), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  I++S  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3108 IACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3166

Query: 175  AAFV--LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A  +     G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3167 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3225

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 3226 KSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDTGQVYA 3284

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3285 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3327



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 90/185 (48%), Gaps = 6/185 (3%)

Query: 160  PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 219
            P+   +V+  A+   +A  +++ +VF  G N     G    ++ I  P   E L  +   
Sbjct: 2942 PNTGSLVRKKAAGLESAATIRT-KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVV 2999

Query: 220  QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAG 277
            QV  G      +T+ G V+ CG  T+G+LG G  +   P P+ I  L   V   V + +G
Sbjct: 3000 QVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSG 3059

Query: 278  PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
              + +A+T +G V+S+G G +  LGH  + +  +PR I+  + K I    ++ G  H  A
Sbjct: 3060 GRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAA 3117

Query: 338  LDSSG 342
            + SSG
Sbjct: 3118 ITSSG 3122



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 83/177 (46%), Gaps = 5/177 (2%)

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS--ASENHAAFV 178
           Y   + +   +++ G    G LGHG    Q +            V+ VS  + +     V
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGL-KGLKVIDVSCGSGDAQTLAV 621

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
            ++GQV++ GD      G R  +     P+L+E L+ +   +V  G  F+  LT  G V+
Sbjct: 622 TENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVY 680

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
           T G   + +LGHG       PK +  L+    V+ +AAG ++ LA+T +  V+S+GS
Sbjct: 681 TWGKGDNQRLGHGTEEHVRYPKLLEGLKG-KKVIDVAAGSTHCLALTEDSEVHSWGS 736



 Score = 57.4 bits (137), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 53/169 (31%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       +V+V      + 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDIVKVRCGSQFSI 671

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV+T G   +   GH  T   +  P+L+E LKG     V AG      LT    
Sbjct: 672 ALTKDGQVYTWGKGDNQRLGH-GTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSE 730

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 731 VHSWGSNDQCQ--HFDTLRITKPEPAALPGL-DTKHIVGIACGPAQSFA 776



 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4157 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4215

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4216 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4274

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    + ++A G ++ LA
Sbjct: 4275 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKINRVACGSAHTLA 4320



 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122  HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 3168 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 3226

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SG V+T G    F  GH  T+  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 3227 SGVVWTWGKGDYFRLGH-GTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAW 3285

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 3286 GDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 3329



 Score = 46.6 bits (109), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 67/137 (48%), Gaps = 3/137 (2%)

Query: 207  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            P   EAL  +   Q+  G      +T  G ++  G    G+LG G T    TP  +  ++
Sbjct: 3981 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQ 4040

Query: 267  EVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
             V    V + +G  + LA++  G VYS+G   +  LGHG +    +PR I++ R  GI V
Sbjct: 4041 HVFIKKVAVNSGGKHCLALSFEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLR--GIEV 4098

Query: 326  VRVSAGDEHVVALDSSG 342
            V ++AG  H   + ++G
Sbjct: 4099 VDIAAGGAHSACITAAG 4115



 Score = 38.5 bits (88), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 56/113 (49%), Gaps = 7/113 (6%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3957 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4012

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            + G G+   LG G       P  +++ +   I  V V++G +H +AL   G V
Sbjct: 4013 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSFEGEV 4065


>gi|63995563|gb|AAY41038.1| unknown [Homo sapiens]
          Length = 382

 Score = 92.0 bits (227), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 110/227 (48%), Gaps = 7/227 (3%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 99

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 239 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGV 263



 Score = 90.1 bits (222), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 75/234 (32%), Positives = 113/234 (48%), Gaps = 7/234 (2%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDRGQLFSWGAGSDGQLGL-MTTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYV 344
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLI 316



 Score = 74.7 bits (182), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 58/189 (30%), Positives = 101/189 (53%), Gaps = 10/189 (5%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N    +P  + AL    
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN----KPEQIGALADQH 85

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQ-TILQVSC 144

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 336 VALDSSGYV 344
            AL  SG V
Sbjct: 203 FALSLSGAV 211



 Score = 72.0 bits (175), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 65/208 (31%), Positives = 100/208 (48%), Gaps = 6/208 (2%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++ G +H L L ++   F+ G +  G LG G E     S  R+       + QV+A  
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG VF  G N++   G  D  +    P  V+ L+      ++ G   T  LT
Sbjct: 200 AHSFALSLSGAVFGWGMNNAGQLGLSD-EKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGNGVV 290
             G V T G+ + GQLGH    D   P+ +  LE +GS V QIA G  + LA V  +G++
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTF 318
           Y+FG G+   LG G   +   P  ++ +
Sbjct: 317 YAFGCGARGQLGTGHTCNVKCPSPVKGY 344



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/160 (31%), Positives = 82/160 (51%), Gaps = 15/160 (9%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 303
           T GQLGH    ++  P+ I  L +   ++ +A G S+ LA++  G ++S+G+GS+  LG 
Sbjct: 62  TKGQLGHEREGNK--PEQIGALADQ-HIIHVACGESHSLALSDRGQLFSWGAGSDGQLGL 118

Query: 304 GEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
               D +  PR IQ   ++ I  ++VS G+ H +AL + G
Sbjct: 119 MTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADG 156


>gi|338534909|ref|YP_004668243.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
 gi|337261005|gb|AEI67165.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
          Length = 862

 Score = 92.0 bits (227), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 79/236 (33%), Positives = 105/236 (44%), Gaps = 18/236 (7%)

Query: 112 GNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
           G   I  G YHTL +  + +V++ G++  G LG G  T +    T +  P    V  +SA
Sbjct: 208 GVTAIAAGDYHTLAVRQDGTVWAWGNNALGQLGDGTYTER---LTPVQVPGLTGVTAISA 264

Query: 171 SENHAAFVLQSGQVFTCGDN--SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
            E+H   V Q G V+  GDN       G R T+R    P  V  L GV    +  G   T
Sbjct: 265 GESHTVAVRQDGTVWAWGDNVWGQLGDGTR-TDR--LTPVQVPGLSGVTA--IAEGRRHT 319

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
             +   G V   G N  GQLG G   DR TP  +  L    SV  IAAG  + LAV  +G
Sbjct: 320 FAVRQDGTVWAWGLNFWGQLGDGTRSDRLTPVQVPDLT---SVTAIAAGDYHTLAVRQDG 376

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            V+++G      LG G   D L P  +         V  ++AG+ H VA+   G V
Sbjct: 377 TVWAWGDNVWGQLGDGTYTDRLTPVQVPGL----TGVTAIAAGESHTVAMRQDGTV 428



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 77/236 (32%), Positives = 108/236 (45%), Gaps = 13/236 (5%)

Query: 112 GNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
           G   I  G  HT+ +  + +V++ G ++ G LG G  T +    T +  P    V  ++A
Sbjct: 408 GVTAIAAGESHTVAMRQDGTVWAWGDNVWGQLGDGTYTDR---LTPVQVPDLTSVTAIAA 464

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC-KQVTAGLNFTG 229
            + H   V Q G V   G N+    G   ++R    P +V  L GV     + AG + T 
Sbjct: 465 GDYHTLAVRQDGTVCAWGFNAYGQLGDGTSSRSP-SPVMVPGLTGVTVFAALAAGDSHTV 523

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
            +   G V   G N  GQLG G T+DR  P  I  L     V  IAAG ++ LA   +G 
Sbjct: 524 AVMQDGTVWAWGLNASGQLGDGATIDRRIPVQIPGLA---GVTAIAAGSAHTLAAGQDGA 580

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVS 345
           V+S+G+ S   LG G     L P  +Q     G+    ++AGD H VAL   G VS
Sbjct: 581 VWSWGANSYGQLGDGTTTHRLSP--VQVPGLTGVSA--MAAGDAHSVALLQDGTVS 632



 Score = 84.3 bits (207), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 73/236 (30%), Positives = 103/236 (43%), Gaps = 18/236 (7%)

Query: 112 GNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
           G   I  GR HT  +  + +V++ G +  G LG G  T +    T +  P    V  ++A
Sbjct: 158 GVTAIAAGRRHTFAVRQDGTVWAWGDNAWGQLGDGTRTNR---LTPVQVPGLTGVTAIAA 214

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            + H   V Q G V+  G+N+    G   T      P  V  L GV    ++AG + T  
Sbjct: 215 GDYHTLAVRQDGTVWAWGNNALGQLGD-GTYTERLTPVQVPGLTGVTA--ISAGESHTVA 271

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           +   G V   G N  GQLG G   DR TP  +  L     V  IA G  +  AV  +G V
Sbjct: 272 VRQDGTVWAWGDNVWGQLGDGTRTDRLTPVQVPGLS---GVTAIAEGRRHTFAVRQDGTV 328

Query: 291 YSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           +++  G NF   LG G + D L P  +         V  ++AGD H +A+   G V
Sbjct: 329 WAW--GLNFWGQLGDGTRSDRLTPVQVPDL----TSVTAIAAGDYHTLAVRQDGTV 378



 Score = 84.0 bits (206), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 71/232 (30%), Positives = 104/232 (44%), Gaps = 20/232 (8%)

Query: 117 TTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHA 175
           T G YHT+ +  + + ++ G++  G LG G  T +    T +  P    V  V+A  +H 
Sbjct: 13  TAGEYHTVAVRQDGTAWAWGNNAWGQLGDGTRTDR---LTPVQVPGLTGVTAVAAGRHHT 69

Query: 176 AFVLQSGQVFTCGDNSSFCCG---HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             V Q G V+  G N     G   H + + P+  P     L GV    + AG   T  ++
Sbjct: 70  FAVRQDGTVWAWGLNVWGQLGDGTHTERHTPVQVP----GLTGVTA--IAAGRRHTFAVS 123

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G V   G N  GQLG G   DR TP     L E+  V  IAAG  +  AV  +G V++
Sbjct: 124 QDGTVWAWGDNDWGQLGDGTRADRHTPVQ---LPELTGVTAIAAGRRHTFAVRQDGTVWA 180

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           +G  +   LG G + + L P  +         V  ++AGD H +A+   G V
Sbjct: 181 WGDNAWGQLGDGTRTNRLTPVQVPGL----TGVTAIAAGDYHTLAVRQDGTV 228



 Score = 81.6 bits (200), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 68/233 (29%), Positives = 102/233 (43%), Gaps = 17/233 (7%)

Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G YHTL +  + +V++ G ++ G LG G  T +    T +  P    V  ++A E+H
Sbjct: 362 IAAGDYHTLAVRQDGTVWAWGDNVWGQLGDGTYTDR---LTPVQVPGLTGVTAIAAGESH 418

Query: 175 AAFVLQSGQVFTCGDNSSFCCG---HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
              + Q G V+  GDN     G   + D   P+  P L           + AG   T  +
Sbjct: 419 TVAMRQDGTVWAWGDNVWGQLGDGTYTDRLTPVQVPDLTS------VTAIAAGDYHTLAV 472

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
              G V   G N +GQLG G +   P+P  +  L  V     +AAG S+ +AV  +G V+
Sbjct: 473 RQDGTVCAWGFNAYGQLGDGTSSRSPSPVMVPGLTGVTVFAALAAGDSHTVAVMQDGTVW 532

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           ++G  ++  LG G   D   P  I         V  ++AG  H +A    G V
Sbjct: 533 AWGLNASGQLGDGATIDRRIPVQIPGL----AGVTAIAAGSAHTLAAGQDGAV 581



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 75/234 (32%), Positives = 109/234 (46%), Gaps = 19/234 (8%)

Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV---VQVSAS 171
           I  G YHTL +  + +V + G +  G LG G   T   S + +  P    V     ++A 
Sbjct: 462 IAAGDYHTLAVRQDGTVCAWGFNAYGQLGDG---TSSRSPSPVMVPGLTGVTVFAALAAG 518

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
           ++H   V+Q G V+  G N+S   G   T +R I  P  +  L GV    + AG   T  
Sbjct: 519 DSHTVAVMQDGTVWAWGLNASGQLGDGATIDRRI--PVQIPGLAGVTA--IAAGSAHTLA 574

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
               G V + G+N++GQLG G T  R +P  +  L  V +   +AAG ++ +A+  +G V
Sbjct: 575 AGQDGAVWSWGANSYGQLGDGTTTHRLSPVQVPGLTGVSA---MAAGDAHSVALLQDGTV 631

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            ++G  S   LG G     L P  +Q     G  V  V+AG  H VAL   G V
Sbjct: 632 SAWGRNSWGQLGDGTTAARLTP--VQVHGLTG--VTAVAAGSLHTVALRQDGTV 681



 Score = 67.8 bits (164), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 62/219 (28%), Positives = 95/219 (43%), Gaps = 13/219 (5%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L+ + +V + G +  G LG G   T     T +       V  V+A   H   + Q G V
Sbjct: 625 LLQDGTVSAWGRNSWGQLGDG---TTAARLTPVQVHGLTGVTAVAAGSLHTVALRQDGTV 681

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
           +  G N     G   T R +  P  V+ L  V    + AG   T  +   G V   G N 
Sbjct: 682 WAWGYNDLGQLGDGTTTRRL-APVQVQGLTDVTA--IAAGYFHTVAVRQDGTVWAWGYNL 738

Query: 245 HGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG 304
            GQLG G +  R TP  +   +E+  V  +AAG ++ +AV  +G V+++G+ S   LG+G
Sbjct: 739 WGQLGDGSSTARSTPVQV---QELTGVSALAAGYAHTVAVKQDGTVWAWGNNSGTQLGNG 795

Query: 305 EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
              D   P  ++        V  ++AG  H  A+   G+
Sbjct: 796 SSTDRYTPVWVEGL----TGVSALTAGRFHTAAVSPEGF 830



 Score = 64.3 bits (155), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 70/149 (46%), Gaps = 9/149 (6%)

Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G +HT+ +  + +V++ G +L G LG G  T +    T +       V  ++A   H
Sbjct: 715 IAAGYFHTVAVRQDGTVWAWGYNLWGQLGDGSSTARS---TPVQVQELTGVSALAAGYAH 771

Query: 175 AAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
              V Q G V+  G+NS    G+   T+R  + P  VE L GV    +TAG   T  ++ 
Sbjct: 772 TVAVKQDGTVWAWGNNSGTQLGNGSSTDR--YTPVWVEGLTGVSA--LTAGRFHTAAVSP 827

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
            G     G N  GQ+G G T DRP P  +
Sbjct: 828 EGFGWAWGRNNFGQVGDGTTADRPRPVDV 856



 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 58/188 (30%), Positives = 78/188 (41%), Gaps = 10/188 (5%)

Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
           +  P    V   +A E H   V Q G  +  G+N+    G   T      P  V  L GV
Sbjct: 1   MQVPGLTGVTATTAGEYHTVAVRQDGTAWAWGNNAWGQLGD-GTRTDRLTPVQVPGLTGV 59

Query: 217 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
               V AG + T  +   G V   G N  GQLG G   +R TP  +  L     V  IAA
Sbjct: 60  TA--VAAGRHHTFAVRQDGTVWAWGLNVWGQLGDGTHTERHTPVQVPGLT---GVTAIAA 114

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
           G  +  AV+ +G V+++G      LG G + D   P  +Q     G  V  ++AG  H  
Sbjct: 115 GRRHTFAVSQDGTVWAWGDNDWGQLGDGTRADRHTP--VQLPELTG--VTAIAAGRRHTF 170

Query: 337 ALDSSGYV 344
           A+   G V
Sbjct: 171 AVRQDGTV 178


>gi|326918486|ref|XP_003205519.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like
           [Meleagris gallopavo]
          Length = 1050

 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 117/244 (47%), Gaps = 13/244 (5%)

Query: 102 HSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS 161
           H  ++ E + G      G +   L+ +  V++CG +  G LGH  E ++      I   +
Sbjct: 32  HDRNVKEVACG------GNHSVFLLEDGEVYTCGLNTKGQLGHESEGSKP---ELIGALA 82

Query: 162 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
             H+V V+  E+H+  +   GQVF+ G  S    G       +  PRL++ L      Q+
Sbjct: 83  GQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQI 142

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           + G      L   G   T G N++GQLG G +   + +P+ +  L+ +  + Q+AAG ++
Sbjct: 143 SCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGI-PLAQVAAGGAH 201

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
             A++ +G V+ +G  S+  LG  ++ D   P  ++  R +   VV +S G+EH   L  
Sbjct: 202 SFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQ--KVVYISCGEEHTAVLTK 259

Query: 341 SGYV 344
           SG V
Sbjct: 260 SGGV 263



 Score = 87.8 bits (216), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 109/233 (46%), Gaps = 5/233 (2%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + +  G  H++ +S+   VFS G+   G LG             I   +   ++Q+S   
Sbjct: 87  VHVACGESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQISCGN 146

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H   +   GQ FT G NS    G          P+ V++L G+P  QV AG   +  L+
Sbjct: 147 WHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALS 206

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
           + G V   G N+ GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V++
Sbjct: 207 LSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRS-QKVVYISCGEEHTAVLTKSGGVFT 265

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYV 344
           FG+GS   LGH   +DE+ PR +      G  V +++ G  H +A + SSG +
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVSQIACGRHHTLAFVPSSGMI 316



 Score = 77.8 bits (190), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 68/194 (35%), Positives = 95/194 (48%), Gaps = 6/194 (3%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QI+ G +H L L ++   F+ G +  G LG G E     S  R+       + QV+A  
Sbjct: 140 LQISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG VF  G NSS   G  D  R    P  V+ L+      ++ G   T  LT
Sbjct: 200 AHSFALSLSGAVFGWGKNSSGQLGLSD-ERDRESPCHVKLLRSQKVVYISCGEEHTAVLT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGNGVV 290
             G V T G+ + GQLGH    D   P+ +  LE +GS V QIA G  + LA V  +G++
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVSQIACGRHHTLAFVPSSGMI 316

Query: 291 YSFGSGSNFCLGHG 304
           Y+FG G+   LG G
Sbjct: 317 YAFGCGTRGQLGTG 330



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/150 (32%), Positives = 67/150 (44%), Gaps = 4/150 (2%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+  G  H+  +S S +VF  G +  G LG   E  +  S   +    +  VV +S  E 
Sbjct: 194 QVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDR-ESPCHVKLLRSQKVVYISCGEE 252

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFLT 232
           H A + +SG VFT G  S    GH   N  +  PR V  L G    Q+  G + T  F+ 
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV-NPRRVLELMGSEVSQIACGRHHTLAFVP 311

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
             G ++  G  T GQLG G T +   P  +
Sbjct: 312 SSGMIYAFGCGTRGQLGTGHTCNVKCPSPV 341


>gi|297673957|ref|XP_002815007.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
           [Pongo abelii]
          Length = 1050

 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 109/225 (48%), Gaps = 7/225 (3%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 99

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALASDGQFF 159

Query: 239 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSG 261



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 75/234 (32%), Positives = 113/234 (48%), Gaps = 7/234 (2%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALASDGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYV 344
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +
Sbjct: 265 TFGAGSYGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLI 316



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 65/194 (33%), Positives = 96/194 (49%), Gaps = 6/194 (3%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++ G +H L L S+   F+ G +  G LG G E     S  R+       + QV+A  
Sbjct: 140 LQVSCGNWHCLALASDGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG VF  G N++   G  D  +    P  V+ L+      ++ G   T  LT
Sbjct: 200 AHSFALSLSGAVFGWGMNNAGQLGLSD-EKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGNGVV 290
             G V T G+ ++GQLGH    D   P+ +  LE +GS V QIA G  + LA V  +G++
Sbjct: 259 KSGGVFTFGAGSYGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLI 316

Query: 291 YSFGSGSNFCLGHG 304
           Y+FG G+   LG G
Sbjct: 317 YAFGCGARGQLGTG 330



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 58/189 (30%), Positives = 101/189 (53%), Gaps = 10/189 (5%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N    +P  + AL    
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN----KPEQIGALADQH 85

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALASDGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 336 VALDSSGYV 344
            AL  SG V
Sbjct: 203 FALSLSGAV 211



 Score = 72.0 bits (175), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 51/165 (30%), Positives = 83/165 (50%), Gaps = 25/165 (15%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           T GQLGH    ++P        E++G+     ++ +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 299 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL S G
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALASDG 156


>gi|449499989|ref|XP_004174916.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC3-like [Taeniopygia guttata]
          Length = 1050

 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 67/242 (27%), Positives = 117/242 (48%), Gaps = 13/242 (5%)

Query: 102 HSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS 161
           H  ++ E + G      G +   L+ +  V++CG +  G LGH  E ++     +I   +
Sbjct: 32  HDRNVKEVACG------GNHSVFLLEDGEVYTCGLNTKGQLGHDCEGSKP---EQIGALA 82

Query: 162 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
             H+V V+  E+H+  +   GQ+F+ G  S    G       +  PRL++ L      QV
Sbjct: 83  GQHIVHVACGESHSVALSDQGQLFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQV 142

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           + G      L   G   T G N++GQLG G +   + +P+ +  L+ +  + Q+AAG ++
Sbjct: 143 SCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGI-PLAQVAAGGAH 201

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
             A++ +G V+ +G  S+  LG  ++ D   P  ++  R +   VV +S G+EH   L  
Sbjct: 202 SFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQ--KVVYISCGEEHTAVLTK 259

Query: 341 SG 342
           SG
Sbjct: 260 SG 261



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 109/233 (46%), Gaps = 5/233 (2%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + +  G  H++ +S+   +FS G+   G LG             I   +   ++QVS   
Sbjct: 87  VHVACGESHSVALSDQGQLFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQVSCGN 146

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H   +   GQ FT G NS    G          P+ V++L G+P  QV AG   +  L+
Sbjct: 147 WHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALS 206

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
           + G V   G N+ GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V++
Sbjct: 207 LSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRS-QKVVYISCGEEHTAVLTKSGGVFT 265

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYV 344
           FG+GS   LGH   +DE+ PR +      G  V +++ G  H +A + SSG +
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVSQIACGRHHTLAFVPSSGMI 316



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 67/194 (34%), Positives = 95/194 (48%), Gaps = 6/194 (3%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++ G +H L L ++   F+ G +  G LG G E     S  R+       + QV+A  
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG VF  G NSS   G  D  R    P  V+ L+      ++ G   T  LT
Sbjct: 200 AHSFALSLSGAVFGWGKNSSGQLGLSD-ERDRESPCHVKLLRSQKVVYISCGEEHTAVLT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGNGVV 290
             G V T G+ + GQLGH    D   P+ +  LE +GS V QIA G  + LA V  +G++
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVSQIACGRHHTLAFVPSSGMI 316

Query: 291 YSFGSGSNFCLGHG 304
           Y+FG G+   LG G
Sbjct: 317 YAFGCGTRGQLGTG 330



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/150 (32%), Positives = 67/150 (44%), Gaps = 4/150 (2%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+  G  H+  +S S +VF  G +  G LG   E  +  S   +    +  VV +S  E 
Sbjct: 194 QVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDR-ESPCHVKLLRSQKVVYISCGEE 252

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFLT 232
           H A + +SG VFT G  S    GH   N  +  PR V  L G    Q+  G + T  F+ 
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV-NPRRVLELMGSEVSQIACGRHHTLAFVP 311

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
             G ++  G  T GQLG G T +   P  +
Sbjct: 312 SSGMIYAFGCGTRGQLGTGHTCNVKCPSPV 341


>gi|338723767|ref|XP_001496703.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Equus
           caballus]
          Length = 1050

 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 109/225 (48%), Gaps = 7/225 (3%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H+V V+  E+H   +
Sbjct: 43  GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIVHVACGESHNLAL 99

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PR+++ L      QV+ G   +  L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDAVAVPRVIQKLNQQTILQVSCGNWHSLALAADGQFF 159

Query: 239 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG
Sbjct: 219 AGQLGLSDEEDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSG 261



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 75/234 (32%), Positives = 113/234 (48%), Gaps = 7/234 (2%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  VHVACGESHNLALSDRGQLFSWGAGSDGQLGLM-TTEDAVAVPRVIQKLNQQTILQVSCG 145

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H+  +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHSLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYV 344
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLI 316



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 58/189 (30%), Positives = 100/189 (52%), Gaps = 10/189 (5%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N    +P  + AL    
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN----KPEQIGALADQH 85

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G +    L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IVHVACGESHNLALSDRGQLFSWGAGSDGQLGLMTTEDAVAVPRVIQKLNQ-QTILQVSC 144

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHSLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 336 VALDSSGYV 344
            AL  SG V
Sbjct: 203 FALSLSGAV 211



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 65/195 (33%), Positives = 97/195 (49%), Gaps = 8/195 (4%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++ G +H+L L ++   F+ G +  G LG G E     S  R+       + QV+A  
Sbjct: 140 LQVSCGNWHSLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
            H+  +  SG VF  G N++   G  D  +R    P  V+ L+      ++ G   T  L
Sbjct: 200 AHSFALSLSGAVFGWGMNNAGQLGLSDEEDRE--SPCHVKLLRTQKVVYISCGEEHTAVL 257

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGNGV 289
           T  G V T G+ + GQLGH    D   P+ +  LE +GS V QIA G  + LA V  +G+
Sbjct: 258 TKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGL 315

Query: 290 VYSFGSGSNFCLGHG 304
           +Y+FG G+   LG G
Sbjct: 316 IYAFGCGARGQLGTG 330



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 51/165 (30%), Positives = 83/165 (50%), Gaps = 25/165 (15%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           T GQLGH    ++P        E++G+     +V +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIVHVACGESHNLALSDRGQLFSWGAGSD 113

Query: 299 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G
Sbjct: 114 GQLGLMTTEDAVAVPRVIQKLNQQTI--LQVSCGNWHSLALAADG 156


>gi|414586169|tpg|DAA36740.1| TPA: putative regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 1056

 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 70/240 (29%), Positives = 114/240 (47%), Gaps = 15/240 (6%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           ++ G +HT LI++S  +++ G    GVLGHG   + C     +        + VS    H
Sbjct: 375 VSCGTWHTALITSSGQLYTFGDGTFGVLGHGNRAS-CSYPKEVESLKGLRTISVSCGVWH 433

Query: 175 AAFVLQ---------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            A V++         SG++FT GD   +  GH D +  + +P  V +L      +   G 
Sbjct: 434 TAAVVEVIISQSNASSGKLFTWGDGDKYRLGHGDRSSKL-KPTCVPSLIDYNFHKAACGH 492

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
             T  LT  GH+ T GS  +GQLG+ +  D   P+ +      G VV++A G  ++  +T
Sbjct: 493 TLTIGLTTSGHIFTVGSPVYGQLGNPNN-DGRYPRLVEEQLGGGGVVEVACGSYHVAVLT 551

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVS 345
             G VY++G G+N  LGHG+  D   P  ++  + + +   RV+ G     A+    +VS
Sbjct: 552 NAGEVYTWGKGTNGRLGHGDIADRKVPTLVEALKDRSVK--RVACGSSFTAAICQHKWVS 609



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/178 (33%), Positives = 92/178 (51%), Gaps = 9/178 (5%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHR-DTNRPIFRPRLVEALKGVPCKQVTA 223
           V  V+    HAA V +  +VFT G+  S   GH   TN  +F+PRLVE+L     + +  
Sbjct: 265 VSYVACGVKHAALVTRQAEVFTWGEECSGRLGHGIGTN--VFQPRLVESLSTCNVELIAC 322

Query: 224 GLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSY 280
           G   T  +T  G ++T G  TH  G LGHG  +    PK ++ PL+ +  V  ++ G  +
Sbjct: 323 GEFHTCAVTATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSGPLDGL-PVSAVSCGTWH 381

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
              +T +G +Y+FG G+   LGHG +     P+ +++   KG+  + VS G  H  A+
Sbjct: 382 TALITSSGQLYTFGDGTFGVLGHGNRASCSYPKEVESL--KGLRTISVSCGVWHTAAV 437



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/236 (24%), Positives = 104/236 (44%), Gaps = 15/236 (6%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           ++  L+   + VF+ G    G LGHG   T       +   S  +V  ++  E H   V 
Sbjct: 273 KHAALVTRQAEVFTWGEECSGRLGHGI-GTNVFQPRLVESLSTCNVELIACGEFHTCAVT 331

Query: 180 QSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
            +G ++T GD +  +   GH          R+   L G+P   V+ G   T  +T  G +
Sbjct: 332 ATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSGPLDGLPVSAVSCGTWHTALITSSGQL 391

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV---------TGNG 288
           +T G  T G LGHG+      PK +  L+ +   + ++ G  +  AV           +G
Sbjct: 392 YTFGDGTFGVLGHGNRASCSYPKEVESLKGL-RTISVSCGVWHTAAVVEVIISQSNASSG 450

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            ++++G G  + LGHG++  +L+P  + +      H  + + G    + L +SG++
Sbjct: 451 KLFTWGDGDKYRLGHGDRSSKLKPTCVPSLIDYNFH--KAACGHTLTIGLTTSGHI 504



 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 70/156 (44%), Gaps = 7/156 (4%)

Query: 189 DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 248
           D S++  G   T   +  P+ +E+   +    V  G+     +T +  V T G    G+L
Sbjct: 239 DRSAYSPG---TTTDVLVPKPLESNVMLDVSYVACGVKHAALVTRQAEVFTWGEECSGRL 295

Query: 249 GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQ 306
           GHG   +   P+ +  L    +V  IA G  +  AVT  G +Y++G G++    LGHG  
Sbjct: 296 GHGIGTNVFQPRLVESLSTC-NVELIACGEFHTCAVTATGDLYTWGDGTHNAGLLGHGSN 354

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
                P+ + +    G+ V  VS G  H   + SSG
Sbjct: 355 VSHWIPKRV-SGPLDGLPVSAVSCGTWHTALITSSG 389


>gi|291401438|ref|XP_002717008.1| PREDICTED: hect domain and RLD 3 [Oryctolagus cuniculus]
          Length = 1504

 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 109/227 (48%), Gaps = 7/227 (3%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H+V V+  E+H+  +
Sbjct: 497 GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIVHVACGESHSLAL 553

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 554 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 613

Query: 239 TCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G      T P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 614 TWGKNSHGQLGLGKEFPSQTSPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 672

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V
Sbjct: 673 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGV 717



 Score = 90.1 bits (222), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 75/234 (32%), Positives = 113/234 (48%), Gaps = 7/234 (2%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 541 VHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 599

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 600 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFAL 659

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 660 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVF 718

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYV 344
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +
Sbjct: 719 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLI 770



 Score = 74.3 bits (181), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 56/183 (30%), Positives = 99/183 (54%), Gaps = 10/183 (5%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTA 223
           V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N    +P  + AL       V  
Sbjct: 490 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN----KPEQIGALADQHIVHVAC 545

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAGPSYML 282
           G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ G  + L
Sbjct: 546 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSCGNWHCL 604

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           A+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H  AL  S
Sbjct: 605 ALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSL--EGIPLAQVAAGGAHSFALSLS 662

Query: 342 GYV 344
           G V
Sbjct: 663 GAV 665



 Score = 72.4 bits (176), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 64/194 (32%), Positives = 95/194 (48%), Gaps = 6/194 (3%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++ G +H L L ++   F+ G +  G LG G E     S  R+       + QV+A  
Sbjct: 594 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGG 653

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG VF  G N++   G  D  +    P  V+ L+      ++ G   T  LT
Sbjct: 654 AHSFALSLSGAVFGWGMNNAGQLGLSD-EKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 712

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGNGVV 290
             G V T G+ + GQLGH    D   P+ +  LE +GS V QIA G  + LA V  +G++
Sbjct: 713 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLI 770

Query: 291 YSFGSGSNFCLGHG 304
           Y+FG G+   LG G
Sbjct: 771 YAFGCGARGQLGTG 784


>gi|86129504|ref|NP_001034387.1| probable E3 ubiquitin-protein ligase HERC3 [Gallus gallus]
 gi|60098971|emb|CAH65316.1| hypothetical protein RCJMB04_17g7 [Gallus gallus]
          Length = 1050

 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 117/244 (47%), Gaps = 13/244 (5%)

Query: 102 HSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS 161
           H  ++ E + G      G +   L+ +  V++CG +  G LGH  E ++      I   +
Sbjct: 32  HDRNVKEVACG------GNHSVFLLEDGEVYTCGLNTKGQLGHESEGSKP---EPIGALA 82

Query: 162 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
             H+V V+  E+H+  +   GQVF+ G  S    G       +  PRL++ L      Q+
Sbjct: 83  GQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQI 142

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           + G      L   G   T G N++GQLG G +   + +P+ +  L+ +  + Q+AAG ++
Sbjct: 143 SCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGI-PLAQVAAGGAH 201

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
             A++ +G V+ +G  S+  LG  ++ D   P  ++  R +   VV +S G+EH   L  
Sbjct: 202 SFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQ--KVVYISCGEEHTAVLTK 259

Query: 341 SGYV 344
           SG V
Sbjct: 260 SGGV 263



 Score = 87.8 bits (216), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 109/233 (46%), Gaps = 5/233 (2%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + +  G  H++ +S+   VFS G+   G LG             I   +   ++Q+S   
Sbjct: 87  VHVACGESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQISCGN 146

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H   +   GQ FT G NS    G          P+ V++L G+P  QV AG   +  L+
Sbjct: 147 WHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALS 206

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
           + G V   G N+ GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V++
Sbjct: 207 LSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRS-QKVVYISCGEEHTAVLTKSGGVFT 265

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYV 344
           FG+GS   LGH   +DE+ PR +      G  V +++ G  H +A + SSG +
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVSQIACGRHHTLAFVPSSGMI 316



 Score = 77.4 bits (189), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 68/194 (35%), Positives = 95/194 (48%), Gaps = 6/194 (3%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QI+ G +H L L ++   F+ G +  G LG G E     S  R+       + QV+A  
Sbjct: 140 LQISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG VF  G NSS   G  D  R    P  V+ L+      ++ G   T  LT
Sbjct: 200 AHSFALSLSGAVFGWGKNSSGQLGLSD-ERDRESPCHVKLLRSQKVVYISCGEEHTAVLT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGNGVV 290
             G V T G+ + GQLGH    D   P+ +  LE +GS V QIA G  + LA V  +G++
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVSQIACGRHHTLAFVPSSGMI 316

Query: 291 YSFGSGSNFCLGHG 304
           Y+FG G+   LG G
Sbjct: 317 YAFGCGTRGQLGTG 330



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/150 (32%), Positives = 67/150 (44%), Gaps = 4/150 (2%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+  G  H+  +S S +VF  G +  G LG   E  +  S   +    +  VV +S  E 
Sbjct: 194 QVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDR-ESPCHVKLLRSQKVVYISCGEE 252

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFLT 232
           H A + +SG VFT G  S    GH   N  +  PR V  L G    Q+  G + T  F+ 
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV-NPRRVLELMGSEVSQIACGRHHTLAFVP 311

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
             G ++  G  T GQLG G T +   P  +
Sbjct: 312 SSGMIYAFGCGTRGQLGTGHTCNVKCPSPV 341


>gi|168035990|ref|XP_001770491.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162678199|gb|EDQ64660.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1102

 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 63/177 (35%), Positives = 91/177 (51%), Gaps = 7/177 (3%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  V+    HAA V + G+VFT G+ S    GH   +  +  P+LVEAL     + V  G
Sbjct: 311 VQYVACGGKHAALVTKQGEVFTWGEESGGRLGH-GVDCDVSHPQLVEALASSTTEVVACG 369

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYM 281
                 +T+ G ++T G  TH  G LGHG+ +    PK +  PLEEV  V  IA GP + 
Sbjct: 370 EYHGCAVTLSGDLYTWGDGTHSLGLLGHGNDISHWIPKRVNGPLEEV-RVASIACGPWHT 428

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             VT  G +++FG G+   LGH ++     PR +++   KG+  VR + G  H  A+
Sbjct: 429 AVVTTAGQLFTFGDGTFGVLGHNDRQSAYSPREVESL--KGLRTVRAACGVWHTAAV 483



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 70/282 (24%), Positives = 108/282 (38%), Gaps = 69/282 (24%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G YH   ++ S     +  G+   G+LGHG + +  +   R+N P     V  ++  
Sbjct: 366 VACGEYHGCAVTLSGDLYTWGDGTHSLGLLGHGNDISHWIP-KRVNGPLEEVRVASIACG 424

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H A V  +GQ+FT GD +    GH D  +  + PR VE+LKG+   +   G+  T  +
Sbjct: 425 PWHTAVVTTAGQLFTFGDGTFGVLGHND-RQSAYSPREVESLKGLRTVRAACGVWHTAAV 483

Query: 232 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE------------ 267
                          G + T G    G+LGHGD   R  P  +A L +            
Sbjct: 484 VEVMVGSSSASSCSSGKLFTWGDGDKGRLGHGDKEQRLVPTCVAALVDHNFRKVACGHSL 543

Query: 268 ------------VGS---------------------------VVQIAAGPSYMLAVTGNG 288
                       +GS                           V  IA G  ++  VT   
Sbjct: 544 TVALTTKGEVFTMGSSMFGQLGDPQADGKLPGMVEGRLVDAYVEDIACGAHHVACVTLKS 603

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
            VY++G G+N  LGHG+Q D   P  ++  + K +  +   A
Sbjct: 604 EVYTWGKGANGRLGHGDQEDRNTPTLVEALKEKQVKSIACGA 645



 Score = 45.8 bits (107), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 36/140 (25%), Positives = 66/140 (47%), Gaps = 4/140 (2%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E+   +  + V  G      +T +G V T G  + G+LGHG   D   P+ +  L 
Sbjct: 300 PKALESAIVLDVQYVACGGKHAALVTKQGEVFTWGEESGGRLGHGVDCDVSHPQLVEALA 359

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF--CLGHGEQHDELQPRAIQTFRRKGIH 324
              + V +A G  +  AVT +G +Y++G G++    LGHG       P+ +     + + 
Sbjct: 360 SSTTEV-VACGEYHGCAVTLSGDLYTWGDGTHSLGLLGHGNDISHWIPKRVNGPLEE-VR 417

Query: 325 VVRVSAGDEHVVALDSSGYV 344
           V  ++ G  H   + ++G +
Sbjct: 418 VASIACGPWHTAVVTTAGQL 437



 Score = 38.9 bits (89), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 46/104 (44%), Gaps = 2/104 (1%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L +   VF+ GSS+ G LG  P+    +          A+V  ++   +H A V    +V
Sbjct: 547 LTTKGEVFTMGSSMFGQLGD-PQADGKLPGMVEGRLVDAYVEDIACGAHHVACVTLKSEV 605

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
           +T G  ++   GH D       P LVEALK    K +  G  FT
Sbjct: 606 YTWGKGANGRLGHGD-QEDRNTPTLVEALKEKQVKSIACGATFT 648


>gi|449444879|ref|XP_004140201.1| PREDICTED: uncharacterized protein LOC101207486 [Cucumis sativus]
 gi|449480975|ref|XP_004156044.1| PREDICTED: uncharacterized LOC101207486 [Cucumis sativus]
          Length = 1104

 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 60/177 (33%), Positives = 94/177 (53%), Gaps = 7/177 (3%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  ++    HAA V + G++FT G+ S    GH   +  + +P+LV+AL     + V+ G
Sbjct: 310 VQNIACGGRHAALVTKQGEIFTWGEESGGRLGH-GVDSDVLQPKLVDALGNTNIELVSCG 368

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYM 281
              T  +T+ G ++T G  T+  G LGHG+ +    PK I  PLE +  V  IA GP + 
Sbjct: 369 EYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWIPKKINGPLEGI-HVSSIACGPWHT 427

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             VT  G +++FG G+   LGHG++     PR +++   KG+  VR + G  H  A+
Sbjct: 428 AVVTSAGQLFTFGDGTFGVLGHGDRGSVTMPREVESL--KGLRTVRAACGVWHTAAV 482



 Score = 75.5 bits (184), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 103/225 (45%), Gaps = 18/225 (8%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           I  G +HT +++++  +F+ G    GVLGHG   +  V+  R +        V+ +    
Sbjct: 420 IACGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRGS--VTMPREVESLKGLRTVRAACGVW 477

Query: 174 HAAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
           H A V++            SG++FT GD      GH D    +  P  V AL      +V
Sbjct: 478 HTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKETKLV-PTCVAALVDPNFCRV 536

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
           + G + T  LT  GHV+T GS  +GQLG+    D   P  +        V +IA G  ++
Sbjct: 537 SCGHSMTVALTTSGHVYTMGSPVYGQLGNPHA-DGKVPVRVEGKLSKSFVEEIACGAYHV 595

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
             +T    VY++G G+N  LGHG+  D   P  ++  + K +  +
Sbjct: 596 AVLTSRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALKDKQVKSI 640



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/196 (30%), Positives = 93/196 (47%), Gaps = 19/196 (9%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           ++ G YHT  ++ S     +  G+   G+LGHG E +  +   +IN P    HV  ++  
Sbjct: 365 VSCGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWIP-KKINGPLEGIHVSSIACG 423

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H A V  +GQ+FT GD +    GH D    +  PR VE+LKG+   +   G+  T  +
Sbjct: 424 PWHTAVVTSAGQLFTFGDGTFGVLGHGDRGS-VTMPREVESLKGLRTVRAACGVWHTAAV 482

Query: 232 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
                          G + T G    G+LGHGD   +  P  +A L +  +  +++ G S
Sbjct: 483 VEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKETKLVPTCVAALVDP-NFCRVSCGHS 541

Query: 280 YMLAVTGNGVVYSFGS 295
             +A+T +G VY+ GS
Sbjct: 542 MTVALTTSGHVYTMGS 557



 Score = 68.6 bits (166), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 64/240 (26%), Positives = 105/240 (43%), Gaps = 18/240 (7%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           GR+  L+     +F+ G    G LGHG + +  +    ++     ++  VS  E H   V
Sbjct: 317 GRHAALVTKQGEIFTWGEESGGRLGHGVD-SDVLQPKLVDALGNTNIELVSCGEYHTCAV 375

Query: 179 LQSGQVFTCGDNS-SF-CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             SG ++T GD + +F   GH +        ++   L+G+    +  G   T  +T  G 
Sbjct: 376 TLSGDLYTWGDGTYNFGLLGHGNEVSHWIPKKINGPLEGIHVSSIACGPWHTAVVTSAGQ 435

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT----------- 285
           + T G  T G LGHGD      P+ +  L+ +   V+ A G  +  AV            
Sbjct: 436 LFTFGDGTFGVLGHGDRGSVTMPREVESLKGL-RTVRAACGVWHTAAVVEVMVGSSSSSN 494

Query: 286 -GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             +G ++++G G    LGHG++  +L P  +        +  RVS G    VAL +SG+V
Sbjct: 495 CSSGKLFTWGDGDKGRLGHGDKETKLVPTCVAALVDP--NFCRVSCGHSMTVALTTSGHV 552



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 86/195 (44%), Gaps = 14/195 (7%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQC 151
           R +R    V H++ +VE       +  G   +   S+  +F+ G    G LGHG + T+ 
Sbjct: 468 RTVRAACGVWHTAAVVE-------VMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKETKL 520

Query: 152 VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCG--HRDTNRPIFRPRL 209
           V  T +      +  +VS   +    +  SG V+T G       G  H D   P+   R+
Sbjct: 521 VP-TCVAALVDPNFCRVSCGHSMTVALTTSGHVYTMGSPVYGQLGNPHADGKVPV---RV 576

Query: 210 VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 269
              L     +++  G      LT R  V+T G   +G+LGHGDT DR +P  +  L++  
Sbjct: 577 EGKLSKSFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALKD-K 635

Query: 270 SVVQIAAGPSYMLAV 284
            V  IA G ++  A+
Sbjct: 636 QVKSIACGTNFTAAI 650



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 69/138 (50%), Gaps = 4/138 (2%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E+   +  + +  G      +T +G + T G  + G+LGHG   D   PK +  L 
Sbjct: 299 PKALESAVVLDVQNIACGGRHAALVTKQGEIFTWGEESGGRLGHGVDSDVLQPKLVDALG 358

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPRAIQTFRRKGIH 324
              ++  ++ G  +  AVT +G +Y++G G+ NF  LGHG +     P+ I     +GIH
Sbjct: 359 NT-NIELVSCGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWIPKKING-PLEGIH 416

Query: 325 VVRVSAGDEHVVALDSSG 342
           V  ++ G  H   + S+G
Sbjct: 417 VSSIACGPWHTAVVTSAG 434


>gi|449275747|gb|EMC84515.1| putative E3 ubiquitin-protein ligase HERC2 [Columba livia]
          Length = 4840

 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 69/237 (29%), Positives = 113/237 (47%), Gaps = 17/237 (7%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 169
           + G ++  L +N  VFS G    G LGHG       P+    +S  +    +  HVV ++
Sbjct: 503 SDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQ----AGKHVVHIA 558

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V+ G     
Sbjct: 559 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTI-PMLVTGLKGLKVIDVSCGSGDAQ 617

Query: 230 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
            L +   G V + G   +G+LG G +    TPK I  L+++  +V++  G  + +A+T +
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DIVKVRCGSQFSIALTKD 676

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G VY++G G N  LGHG +     P+ ++    KG  V+ V+AG  H +AL     V
Sbjct: 677 GQVYTWGKGDNQRLGHGTEEHVRYPKLLEGL--KGKKVIDVAAGSTHCLALTEDSEV 731



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 71/228 (31%), Positives = 106/228 (46%), Gaps = 7/228 (3%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+   L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3060 GRHAMALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAI 3118

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3119 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3177

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3178 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3236

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G V
Sbjct: 3237 DYFRLGHGTDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDTGQV 3282



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 58/181 (32%), Positives = 92/181 (50%), Gaps = 6/181 (3%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4047 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4105

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G + T G   +G+LGHGD+ D+  PK +  L+    V+ IA  +G +  L 
Sbjct: 4106 AHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGY-RVIDIACGSGDAQTLC 4164

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4165 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4222

Query: 344  V 344
            V
Sbjct: 4223 V 4223



 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 74/252 (29%), Positives = 118/252 (46%), Gaps = 13/252 (5%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4035 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4088

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A +  +G +FT G       GH D+   + +P+LVEAL+G
Sbjct: 4089 VIESLRGIEVVDVAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQL-KPKLVEALQG 4147

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4148 YRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4206

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNF-CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
            +  G  + +A+T +G VY++    ++  LGHG      +PR +Q    +G  V+ ++ G 
Sbjct: 4207 VECGSQFSVALTKSGAVYTWQVFRDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGS 4264

Query: 333  EHVVALDSSGYV 344
             H V     G V
Sbjct: 4265 LHCVCCTEDGEV 4276



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 68/224 (30%), Positives = 107/224 (47%), Gaps = 18/224 (8%)

Query: 130  SVFSCGSSLCGVLGHG------PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 183
             V++CG +  G LG G      P   Q  + +  N+      V V +   HA  +   G+
Sbjct: 3016 KVYACGEATNGRLGLGISSGTVPIPRQITALS--NY--VVKKVAVHSGGRHAMALTVDGK 3071

Query: 184  VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            VF+ G+      GH  +     +PRL+EALK    + +  G + +  +T  G ++T G  
Sbjct: 3072 VFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLG 3130

Query: 244  THGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFC 300
             +G+LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    
Sbjct: 3131 EYGRLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGK 3188

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            LG G       P+ I+  R  G  V ++  G +  +AL  SG V
Sbjct: 3189 LGRGGSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVV 3230



 Score = 75.5 bits (184), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 61/187 (32%), Positives = 96/187 (51%), Gaps = 20/187 (10%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           VVQV+ +E     + ++G+V+T   NS       DT      P+LV++L      ++ A 
Sbjct: 454 VVQVACAEKRFLILSRNGRVYTQAYNS-------DT----LGPQLVQSLASRNIVKIAAH 502

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V + G    G+LGHGDT+    PK I+ L  ++ G  VV IA G +
Sbjct: 503 SDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVHIACGST 562

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   D+  P  +     KG+ V+ VS  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGL--KGLKVIDVSCGSGDAQTLA 620

Query: 338 LDSSGYV 344
           +  +G V
Sbjct: 621 VTENGQV 627



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 91/190 (47%), Gaps = 11/190 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2994 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSNYVV 3051

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L +   +  IA 
Sbjct: 3052 KKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL-KTKRIRDIAC 3110

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3111 GSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3168

Query: 335  VVALDSSGYV 344
             +AL   G V
Sbjct: 3169 TLALTDEGLV 3178



 Score = 67.8 bits (164), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  I++S  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3108 IACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3166

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3167 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3225

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 3226 KSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDTGQVYA 3284

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3285 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3327



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/162 (30%), Positives = 78/162 (48%), Gaps = 5/162 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2964 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3022

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  + +A+T +G V+S+G G +  
Sbjct: 3023 ATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGK 3082

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            LGH  + +  +PR I+  + K I    ++ G  H  A+ SSG
Sbjct: 3083 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAAITSSG 3122



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 83/177 (46%), Gaps = 5/177 (2%)

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS--ASENHAAFV 178
           Y   + +   +++ G    G LGHG    Q +            V+ VS  + +     V
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGL-KGLKVIDVSCGSGDAQTLAV 621

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
            ++GQV++ GD      G R  +     P+L+E L+ +   +V  G  F+  LT  G V+
Sbjct: 622 TENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVY 680

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
           T G   + +LGHG       PK +  L+    V+ +AAG ++ LA+T +  V+S+GS
Sbjct: 681 TWGKGDNQRLGHGTEEHVRYPKLLEGLKG-KKVIDVAAGSTHCLALTEDSEVHSWGS 736



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 53/169 (31%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       +V+V      + 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDIVKVRCGSQFSI 671

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV+T G   +   GH  T   +  P+L+E LKG     V AG      LT    
Sbjct: 672 ALTKDGQVYTWGKGDNQRLGH-GTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSE 730

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 731 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 776



 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122  HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 3168 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 3226

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SG V+T G    F  GH  T+  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 3227 SGVVWTWGKGDYFRLGH-GTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAW 3285

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 3286 GDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 3329



 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 49/170 (28%), Positives = 77/170 (45%), Gaps = 9/170 (5%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4157 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4215

Query: 177  FVLQSGQVFTCGDNSSFCCGHR---DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
             + +SG V+T      F   HR    ++  + RPR V+ L+G     +  G       T 
Sbjct: 4216 ALTKSGAVYTW---QVFRDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE 4272

Query: 234  RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
             G V+T G N  GQLG G T     P+ +A L+    + ++A G ++ LA
Sbjct: 4273 DGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKINRVACGSAHTLA 4321



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 67/137 (48%), Gaps = 3/137 (2%)

Query: 207  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            P   EAL  +   Q+  G      +T  G ++  G    G+LG G T    TP  +  ++
Sbjct: 3981 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQ 4040

Query: 267  EVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
             V    V + +G  + LA++  G VYS+G   +  LGHG +    +PR I++ R  GI V
Sbjct: 4041 HVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLR--GIEV 4098

Query: 326  VRVSAGDEHVVALDSSG 342
            V V+AG  H   + ++G
Sbjct: 4099 VDVAAGGAHSACITAAG 4115



 Score = 40.8 bits (94), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 7/113 (6%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3957 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4012

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G V
Sbjct: 4013 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4065


>gi|348542108|ref|XP_003458528.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Oreochromis
            niloticus]
          Length = 4936

 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 73/235 (31%), Positives = 119/235 (50%), Gaps = 10/235 (4%)

Query: 115  QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I  N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4106 QVVCGQNCTFVIQPNGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4164

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4165 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4223

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
            +T  G + T G+  +G+LG G+T ++  P+ +  LE    V Q+A G ++ L V+ +G +
Sbjct: 4224 VTADGKLFTFGNGDYGRLGLGNTSNKKLPEKVTALEGY-HVGQVACGLNHTLVVSADGMM 4282

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G V
Sbjct: 4283 VWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGKV 4335



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 69/225 (30%), Positives = 110/225 (48%), Gaps = 7/225 (3%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 4168 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTA 4226

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHT 239
             G++FT G+      G  +T+     P  V AL+G    QV  GLN T  ++  G  V  
Sbjct: 4227 DGKLFTFGNGDYGRLGLGNTSNKKL-PEKVTALEGYHVGQVACGLNHTLVVSADGMMVWA 4285

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G   +G+LG G++  + +P+ +  L  +G + ++A G  + +A+T +G V++FG     
Sbjct: 4286 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVALTKDGKVFTFGQDRLI 4344

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             L  G   +  +P+ +      GIH+  V+ G EH + L S+G V
Sbjct: 4345 GLPEGRARNHNRPQQVPGL--SGIHIQDVAVGAEHTLVLSSTGDV 4387



 Score = 67.8 bits (164), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 67/239 (28%), Positives = 114/239 (47%), Gaps = 39/239 (16%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS----AAHVVQVSA 170
           ++ G  H+  +S +  +++ G    G LGHG   ++       N P+     ++V +VS 
Sbjct: 523 VSAGYRHSAAVSEDGELYTWGEGDFGRLGHGDSNSR-------NIPTLVKDISNVGEVSC 575

Query: 171 SENHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
             +H   + + G+    F  GDN     GH DTNR +++P++VEAL+G+  ++V AG   
Sbjct: 576 GSSHTIALSKDGRTVWSFGGGDNGKL--GHGDTNR-VYKPKVVEALQGMFIRKVCAGSQS 632

Query: 228 TGFLTIRGHVHT--------CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
           +  LT  G V+         CGS+    L          PK I  L     VV I+ G S
Sbjct: 633 SLALTSTGQVYAWGCGACLGCGSSEATAL---------RPKLIEELATT-RVVDISIGDS 682

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           + LA++ +  VY++G+ S    G G     + +P+ +      G+ + ++SAG  H +A
Sbjct: 683 HCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVIGL--DGVAIQQISAGTSHSLA 739



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 61/228 (26%), Positives = 103/228 (45%), Gaps = 11/228 (4%)

Query: 114  MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            +Q++ G  H+ +++ +  +F+ G+   G LG G  + + +   ++      HV QV+   
Sbjct: 4212 VQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLP-EKVTALEGYHVGQVACGL 4270

Query: 173  NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH   V   G +   F  GD      G+         P+ V+ L G+  K+V  G  F+ 
Sbjct: 4271 NHTLVVSADGMMVWAFGDGDYGKLGLGNSTAKS---SPQKVDVLCGIGIKKVACGTQFSV 4327

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             LT  G V T G +    L  G   +   P+ +  L  +  +  +A G  + L ++  G 
Sbjct: 4328 ALTKDGKVFTFGQDRLIGLPEGRARNHNRPQQVPGLSGI-HIQDVAVGAEHTLVLSSTGD 4386

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            VY++GS S   LG G  +   +P  + T + K IH  ++SAG  H  A
Sbjct: 4387 VYTWGSNSEGQLGLGHTNHVREPTLVTTLQGKNIH--QISAGRCHSAA 4432



 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 55/177 (31%), Positives = 82/177 (46%), Gaps = 15/177 (8%)

Query: 173 NHAAFVLQS-GQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEALKGVPCKQVTAGL 225
            +  FV+ S G V  CG  S    G  D+N      +  F P    A+K V   + + G 
Sbjct: 419 QYCTFVISSDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RAIKKVSSSKGSDG- 475

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
             T   T  G V + G   +G+LGHG++  +  PK I    +   VV ++AG  +  AV+
Sbjct: 476 -HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVS 534

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  H +AL   G
Sbjct: 535 EDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSSHTIALSKDG 587



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 65/128 (50%), Gaps = 4/128 (3%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 4105 QQVVCGQNCTFVIQPNGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4164

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H  
Sbjct: 4165 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 4222

Query: 337  ALDSSGYV 344
             + + G +
Sbjct: 4223 VVTADGKL 4230



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 82/180 (45%), Gaps = 11/180 (6%)

Query: 115  QITTGRYHTLLISNSS--VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q+  G  HTL++S     V++ G    G LG G  T +  S  +++      + +V+   
Sbjct: 4265 QVACGLNHTLVVSADGMMVWAFGDGDYGKLGLGNSTAKS-SPQKVDVLCGIGIKKVACGT 4323

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  + + G+VFT G +          R+ NRP    + V  L G+  + V  G   T 
Sbjct: 4324 QFSVALTKDGKVFTFGQDRLIGLPEGRARNHNRP----QQVPGLSGIHIQDVAVGAEHTL 4379

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L+  G V+T GSN+ GQLG G T     P  +  L+   ++ QI+AG  +  A T   V
Sbjct: 4380 VLSSTGDVYTWGSNSEGQLGLGHTNHVREPTLVTTLQG-KNIHQISAGRCHSAAWTAPSV 4438


>gi|326677630|ref|XP_003200872.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Danio
           rerio]
          Length = 4647

 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 72/234 (30%), Positives = 115/234 (49%), Gaps = 11/234 (4%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP--SAAHVVQVSASE 172
           I  G+Y T  +S + +V +CG    G LG G    Q +    +  P  +   V     S+
Sbjct: 406 IEAGQYCTFSVSADGAVKACGKGSYGRLGLGDSNNQSMPKKLVLEPPRTMRKVSSSKGSD 465

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGFL 231
            H   V   G+VF+ GD      GH ++    + P++++  L G     V+AG   +  +
Sbjct: 466 GHTLAVTAEGEVFSWGDGDYGKLGHGNSATQKY-PKIIQGPLLGKVVVCVSAGYRHSAAV 524

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-VV 290
           T  G ++T G    G+LGH D+  R  P  +  +  VG   Q+A G S+ +AV  +G +V
Sbjct: 525 TNDGELYTWGEGDFGRLGHSDSHSRNVPTLVKDISGVG---QVACGSSHTIAVAQDGRIV 581

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           +SFG G N  LGHG+ +   +P+ I+     G  + +V AG +  +AL S+G V
Sbjct: 582 WSFGGGDNGKLGHGDTNRVYRPKVIEALH--GFIIRKVCAGSQSSLALTSAGQV 633



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/255 (25%), Positives = 111/255 (43%), Gaps = 36/255 (14%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T L+ +N +V + G    G LG G  +    + T I+      V Q+     
Sbjct: 3894 QVVCGQNCTFLVQANGTVLAVGEGSYGRLGQG-NSDDLYTPTIISALQGYVVTQLVTSYG 3952

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + ++G+VF+ GD      GH ++ R   RP+ +E L+G    Q+  G   +  
Sbjct: 3953 SDGHSLALTETGEVFSWGDGDYGKLGHGNSERQ-RRPKQIEGLQGEEVVQLACGFKHSAV 4011

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGS------------------ 270
            +T  G + T GS   G+LG   T ++  P+ +  L+   +G                   
Sbjct: 4012 VTADGKLFTFGSGDSGRLGQRSTSNKMIPERVTALDGHHIGQRLIGLPDAMLKNHNRPQI 4071

Query: 271  --------VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
                    +  IA G  ++LA++  G VY++G      LG G  +   +P  + T + K 
Sbjct: 4072 IPALEGVFIEDIAVGCEHILALSNTGDVYAWGCNCEAQLGLGHSNPVKEPILVTTLQGKN 4131

Query: 323  IHVVRVSAGDEHVVA 337
            I   ++SAG  H  A
Sbjct: 4132 IR--QISAGRCHSSA 4144



 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 54/215 (25%), Positives = 94/215 (43%), Gaps = 32/215 (14%)

Query: 160  PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 219
            PS +   QV   +N    V  +G V   G+ S    G  +++  ++ P ++ AL+G    
Sbjct: 3887 PSLSQTQQVVCGQNCTFLVQANGTVLAVGEGSYGRLGQGNSDD-LYTPTIISALQGYVVT 3945

Query: 220  QVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            Q+       G    LT  G V + G   +G+LGHG++  +  PK I  L+    VVQ+A 
Sbjct: 3946 QLVTSYGSDGHSLALTETGEVFSWGDGDYGKLGHGNSERQRRPKQIEGLQG-EEVVQLAC 4004

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR----------------- 319
            G  +   VT +G +++FGSG +  LG     +++ P  +                     
Sbjct: 4005 GFKHSAVVTADGKLFTFGSGDSGRLGQRSTSNKMIPERVTALDGHHIGQRLIGLPDAMLK 4064

Query: 320  ----------RKGIHVVRVSAGDEHVVALDSSGYV 344
                       +G+ +  ++ G EH++AL ++G V
Sbjct: 4065 NHNRPQIIPALEGVFIEDIAVGCEHILALSNTGDV 4099



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/161 (31%), Positives = 74/161 (45%), Gaps = 6/161 (3%)

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           V+  G NSS       T   I +P+L +       + + AG   T  ++  G V  CG  
Sbjct: 372 VYVWGSNSSHQLAE-GTLEKILQPKLAQGFSDA--QMIEAGQYCTFSVSADGAVKACGKG 428

Query: 244 THGQLGHGDTLDRPTPKSIA--PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 301
           ++G+LG GD+ ++  PK +   P   +  V        + LAVT  G V+S+G G    L
Sbjct: 429 SYGRLGLGDSNNQSMPKKLVLEPPRTMRKVSSSKGSDGHTLAVTAEGEVFSWGDGDYGKL 488

Query: 302 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           GHG    +  P+ IQ     G  VV VSAG  H  A+ + G
Sbjct: 489 GHGNSATQKYPKIIQG-PLLGKVVVCVSAGYRHSAAVTNDG 528



 Score = 61.2 bits (147), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 62/198 (31%), Positives = 88/198 (44%), Gaps = 10/198 (5%)

Query: 95  RFLQSVEHSSDI---VETSAGNMQITTGRYHTLLISNSS--VFSCGSSLCGVLGHGPETT 149
           R   S  HS ++   V+  +G  Q+  G  HT+ ++     V+S G    G LGHG +T 
Sbjct: 540 RLGHSDSHSRNVPTLVKDISGVGQVACGSSHTIAVAQDGRIVWSFGGGDNGKLGHG-DTN 598

Query: 150 QCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRL 209
           +      I       + +V A    +  +  +GQVF  G  S   CG  +T     RPRL
Sbjct: 599 RVYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSCLGCGSSETTS--LRPRL 656

Query: 210 VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEV 268
           +E L       ++ G +    L+    V   G+N  GQ G G T    T PK +  LE V
Sbjct: 657 IEELSITKIIDISCGDSHCLALSHENEVFAWGNNAMGQCGQGHTSTPVTKPKKVIGLEGV 716

Query: 269 GSVVQIAAGPSYMLAVTG 286
            S+ QI AG S+ LA T 
Sbjct: 717 -SIQQITAGTSHSLAWTA 733


>gi|37695550|gb|AAR00320.1| HECT E3 ubiquitin ligase [Homo sapiens]
          Length = 1024

 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 70/208 (33%), Positives = 105/208 (50%), Gaps = 10/208 (4%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QIT G YH+L +S    +F+ G +L G LG G +     +   +   +   + Q+SA E
Sbjct: 141 IQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGE 200

Query: 173 NHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            H+  +  SG +++ G N       GH ++      P L+E L     + V  G + +  
Sbjct: 201 AHSTALSMSGNIYSWGKNECGQLGLGHTESKDD---PSLIEGLDNQKVEFVACGGSHSAL 257

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLA-VTGNG 288
           LT  G + T G+  HGQLGH  T +   P  +A L  VG  V QIA G  + LA V+  G
Sbjct: 258 LTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAEL--VGYRVTQIACGRWHTLAYVSDLG 315

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
            V+SFGSG +  LG+G   D+L P  ++
Sbjct: 316 KVFSFGSGKDGQLGNGGTRDQLMPLPVK 343



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 50/173 (28%), Positives = 90/173 (52%), Gaps = 3/173 (1%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           ++Q++  + H+  + + G++F  G N     G          P++VE L GVP  Q++AG
Sbjct: 140 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAG 199

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
              +  L++ G++++ G N  GQLG G T  +  P  I  L+    V  +A G S+   +
Sbjct: 200 EAHSTALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDN-QKVEFVACGGSHSALL 258

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           T +G++++FG+G +  LGH    +EL+P  +      G  V +++ G  H +A
Sbjct: 259 TQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELV--GYRVTQIACGRWHTLA 309



 Score = 45.1 bits (105), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 14/131 (10%)

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP--LEEVGSV--VQIA 275
           Q+T G   +  L+  G +   G N HGQLG G    R  P +  P  +E +  V   QI+
Sbjct: 142 QITCGDYHSLALSKGGELFAWGQNLHGQLGVG----RKFPSTTTPQIVEHLAGVPLAQIS 197

Query: 276 AGPSYMLAVTGNGVVYSFGSGS--NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           AG ++  A++ +G +YS+G        LGH E  D+  P  I+    + +    V+ G  
Sbjct: 198 AGEAHSTALSMSGNIYSWGKNECGQLGLGHTESKDD--PSLIEGLDNQKVEF--VACGGS 253

Query: 334 HVVALDSSGYV 344
           H   L   G +
Sbjct: 254 HSALLTQDGLL 264


>gi|325192607|emb|CCA27034.1| regulator of chromosome condensation (RCC1)like protein putative
           [Albugo laibachii Nc14]
          Length = 362

 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 72/231 (31%), Positives = 114/231 (49%), Gaps = 11/231 (4%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           ++ G  H+LL++ +   F+ G+   G LG G      V+ TRI   +     QV     H
Sbjct: 128 VSCGWKHSLLVTATGEAFAWGTGRHGELGLGTSILHSVNPTRI--LTRQMFQQVHCGWQH 185

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV-----EALKGVPCKQVTAGLNFTG 229
           + FV   G+V +CG N     G  D+  P++ PRL+     + +K +  KQ++ G +   
Sbjct: 186 SVFVSFDGKVSSCGSNKHGQLGTNDSLAPLYSPRLITTTESDEVKSIVVKQISVGWHHCV 245

Query: 230 FLTIRGHVHTCGSNTHGQLGHG--DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
            +T+   V + G  +HGQLG G  D    PT   I P++   ++ Q+A G  + L +T +
Sbjct: 246 CITLGNEVLSWGKGSHGQLGIGLDDGAYTPTSILIDPIKHR-AISQVACGSEHTLLLTHD 304

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           G VYS G G +  LGHG   +E  P  I  F+ + + V  V AG    +A+
Sbjct: 305 GSVYSCGWGEHGNLGHGTTTNEDIPSEILYFQDQQLAVESVRAGGAVSIAI 355



 Score = 68.2 bits (165), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 82/284 (28%), Positives = 119/284 (41%), Gaps = 15/284 (5%)

Query: 72  AGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSV 131
           +G  R  +  +L  C  NW  V+R + +V           G + +T G   T       V
Sbjct: 34  SGSDRVQRTNILAPCAANW--VVRNVVAVACGWQNTIAITGPVNLTEG---TQSSHEHKV 88

Query: 132 FSCGSSLCGVLGHGPE--TTQCVSFTRINFPSAAHVVQ-VSASENHAAFVLQSGQVFTCG 188
           F  GS+  G LG   E     C +   I   +  + VQ VS    H+  V  +G+ F  G
Sbjct: 89  FCWGSNKFGQLGTASEGIDVHCPTAINIYLLAQPYRVQSVSCGWKHSLLVTATGEAFAWG 148

Query: 189 DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 248
                  G   +      P  +  L     +QV  G   + F++  G V +CGSN HGQL
Sbjct: 149 TGRHGELGLGTSILHSVNPTRI--LTRQMFQQVHCGWQHSVFVSFDGKVSSCGSNKHGQL 206

Query: 249 GHGDTL-DRPTPKSIAPLE--EVGSVV--QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 303
           G  D+L    +P+ I   E  EV S+V  QI+ G  + + +T    V S+G GS+  LG 
Sbjct: 207 GTNDSLAPLYSPRLITTTESDEVKSIVVKQISVGWHHCVCITLGNEVLSWGKGSHGQLGI 266

Query: 304 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSLC 347
           G       P +I     K   + +V+ G EH + L   G V  C
Sbjct: 267 GLDDGAYTPTSILIDPIKHRAISQVACGSEHTLLLTHDGSVYSC 310



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 79/179 (44%), Gaps = 10/179 (5%)

Query: 115 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPE-----TTQCVSFTRINFPSAAHVVQV 168
           Q+  G  H++ +S +  V SCGS+  G LG         + + ++ T  +   +  V Q+
Sbjct: 178 QVHCGWQHSVFVSFDGKVSSCGSNKHGQLGTNDSLAPLYSPRLITTTESDEVKSIVVKQI 237

Query: 169 SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR--LVEALKGVPCKQVTAGLN 226
           S   +H   +    +V + G  S    G    +   + P   L++ +K     QV  G  
Sbjct: 238 SVGWHHCVCITLGNEVLSWGKGSHGQLG-IGLDDGAYTPTSILIDPIKHRAISQVACGSE 296

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAV 284
            T  LT  G V++CG   HG LGHG T +   P  I   ++    V+ + AG +  +A+
Sbjct: 297 HTLLLTHDGSVYSCGWGEHGNLGHGTTTNEDIPSEILYFQDQQLAVESVRAGGAVSIAI 355


>gi|147899463|ref|NP_001085604.1| HECT and RLD domain containing E3 ubiquitin protein ligase 3
           [Xenopus laevis]
 gi|49256123|gb|AAH73004.1| MGC82587 protein [Xenopus laevis]
          Length = 1050

 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 68/224 (30%), Positives = 111/224 (49%), Gaps = 4/224 (1%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G+ H+L +S   +++S G+   G LGH            I   S   + Q+S  ++H
Sbjct: 89  IACGQSHSLALSLQGNLYSWGAGNDGQLGHATVEHYSRIPRIIKKLSQQKIQQMSCGDDH 148

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              +   GQ+FT G N+    G  +       P+ V++L+G+P  QVTAG + +  L++ 
Sbjct: 149 CLALGDDGQLFTWGQNTHGQLGLGNGFISQSSPQKVKSLEGIPLAQVTAGGSHSFALSLS 208

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G V   G N+ GQLG  D   + TP  + PL     VV I+ G  +   +T  G +++FG
Sbjct: 209 GAVFGWGKNSAGQLGLNDEQVKETPCHVKPL-RTHKVVYISCGEEHTAILTKAGGLFTFG 267

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           +G +  LGH   H+E+ PR +      G  V +++ G +H +A 
Sbjct: 268 AGGSGQLGHDSLHNEINPRRV--LELMGSEVSQIACGRKHTLAF 309



 Score = 84.0 bits (206), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 62/230 (26%), Positives = 112/230 (48%), Gaps = 8/230 (3%)

Query: 115 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           ++  G  HTL L+ +  V+SCG +  G LGH  E T       +   +  H+  ++  ++
Sbjct: 38  EVACGGKHTLFLMEDGQVYSCGWNGEGQLGHSHEGTHPAPVATL---AEEHIKHIACGQS 94

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  +   G +++ G  +    GH         PR+++ L     +Q++ G +    L  
Sbjct: 95  HSLALSLQGNLYSWGAGNDGQLGHATVEHYSRIPRIIKKLSQQKIQQMSCGDDHCLALGD 154

Query: 234 RGHVHTCGSNTHGQLGHGD-TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
            G + T G NTHGQLG G+  + + +P+ +  LE +  + Q+ AG S+  A++ +G V+ 
Sbjct: 155 DGQLFTWGQNTHGQLGLGNGFISQSSPQKVKSLEGI-PLAQVTAGGSHSFALSLSGAVFG 213

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           +G  S   LG  ++  +  P  ++  R     VV +S G+EH   L  +G
Sbjct: 214 WGKNSAGQLGLNDEQVKETPCHVKPLRTH--KVVYISCGEEHTAILTKAG 261



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/125 (37%), Positives = 68/125 (54%), Gaps = 6/125 (4%)

Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
           K+V  G   T FL   G V++CG N  GQLGH      P P  +A L E   +  IA G 
Sbjct: 37  KEVACGGKHTLFLMEDGQVYSCGWNGEGQLGHSHEGTHPAP--VATLAE-EHIKHIACGQ 93

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           S+ LA++  G +YS+G+G++  LGH   +H    PR I+   ++ I   ++S GD+H +A
Sbjct: 94  SHSLALSLQGNLYSWGAGNDGQLGHATVEHYSRIPRIIKKLSQQKIQ--QMSCGDDHCLA 151

Query: 338 LDSSG 342
           L   G
Sbjct: 152 LGDDG 156



 Score = 67.4 bits (163), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 60/214 (28%), Positives = 105/214 (49%), Gaps = 11/214 (5%)

Query: 135 GSSLCGVLGHGPETTQCVSFT-RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G S  G LG+G      VS      F  A  V +V+    H  F+++ GQV++CG N   
Sbjct: 5   GHSAFGQLGNGHSLKNAVSEPCACTFSLATCVKEVACGGKHTLFLMEDGQVYSCGWNGEG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 253
             GH         P  V  L     K +  G + +  L+++G++++ G+   GQLGH  T
Sbjct: 65  QLGHSHEGT---HPAPVATLAEEHIKHIACGQSHSLALSLQGNLYSWGAGNDGQLGHA-T 120

Query: 254 LDRPT--PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DEL 310
           ++  +  P+ I  L +   + Q++ G  + LA+  +G ++++G  ++  LG G     + 
Sbjct: 121 VEHYSRIPRIIKKLSQ-QKIQQMSCGDDHCLALGDDGQLFTWGQNTHGQLGLGNGFISQS 179

Query: 311 QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            P+ +++   +GI + +V+AG  H  AL  SG V
Sbjct: 180 SPQKVKSL--EGIPLAQVTAGGSHSFALSLSGAV 211


>gi|224589107|ref|NP_001139174.1| probable E3 ubiquitin-protein ligase HERC4-like [Danio rerio]
          Length = 985

 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 58/174 (33%), Positives = 89/174 (51%), Gaps = 3/174 (1%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V+Q++  + H+  +   GQ+F  G+N+    G R     I  P+ +++L G+P  Q++AG
Sbjct: 120 VIQIACGDQHSVALSNDGQLFVWGENAHGQLGLRKEQALIQSPQHLQSLCGIPVAQISAG 179

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
            N +  L++ G V   GSN+ GQLG GDT DR  P  +  L      V I+ G  +   +
Sbjct: 180 GNHSFVLSLSGVVFGWGSNSAGQLGLGDTTDRFVPTIVKSLSG-KKTVSISCGGEHTATL 238

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           +  G V++FGSG    LGH    DE  PR +      G  V +V+ G  H + L
Sbjct: 239 SKGGTVFTFGSGGFGQLGHNSLKDEHHPRLVAELW--GSKVSQVTCGRHHTLVL 290



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 74/230 (32%), Positives = 105/230 (45%), Gaps = 8/230 (3%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QI  G  H++ +SN   +F  G +  G LG   E     S   +       V Q+SA  
Sbjct: 121 IQIACGDQHSVALSNDGQLFVWGENAHGQLGLRKEQALIQSPQHLQSLCGIPVAQISAGG 180

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           NH+  +  SG VF  G NS+   G  DT    F P +V++L G     ++ G   T  L+
Sbjct: 181 NHSFVLSLSGVVFGWGSNSAGQLGLGDTTDR-FVPTIVKSLSGKKTVSISCGGEHTATLS 239

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLAVTG-NGVV 290
             G V T GS   GQLGH    D   P+ +A L   GS V Q+  G  + L +      +
Sbjct: 240 KGGTVFTFGSGGFGQLGHNSLKDEHHPRLVAEL--WGSKVSQVTCGRHHTLVLVALTNRI 297

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAI--QTFRRKGIHVVRVSAGDEHVVAL 338
           YSFG G    LG+GEQ  +  P  +   T       + ++ AG++H  AL
Sbjct: 298 YSFGCGMQGQLGNGEQVKQSVPLPVLLPTDCNCEFTMEKIIAGEKHSFAL 347



 Score = 51.2 bits (121), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 64/138 (46%), Gaps = 4/138 (2%)

Query: 208 RLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGDTLDRPTPKSIAPLE 266
           R ++ L      Q+  G   +  L+  G +   G N HGQLG   +     +P+ +  L 
Sbjct: 110 RPLKGLDNTKVIQIACGDQHSVALSNDGQLFVWGENAHGQLGLRKEQALIQSPQHLQSLC 169

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
            +  V QI+AG ++   ++ +GVV+ +GS S   LG G+  D   P  +++    G   V
Sbjct: 170 GI-PVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTTDRFVPTIVKSL--SGKKTV 226

Query: 327 RVSAGDEHVVALDSSGYV 344
            +S G EH   L   G V
Sbjct: 227 SISCGGEHTATLSKGGTV 244


>gi|431911482|gb|ELK13688.1| Putative E3 ubiquitin-protein ligase HERC3 [Pteropus alecto]
          Length = 1017

 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 111/227 (48%), Gaps = 7/227 (3%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  ++V V+  E+H+  +
Sbjct: 90  GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQNIVHVACGESHSLAL 146

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 147 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 206

Query: 239 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+++G  +
Sbjct: 207 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFAWGMNN 265

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V
Sbjct: 266 AGQLGLSDEEDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGV 310



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 75/234 (32%), Positives = 113/234 (48%), Gaps = 7/234 (2%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 134 VHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 192

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 193 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 252

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 253 SLSGAVFAWGMNNAGQLGLSDEEDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVF 311

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYV 344
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +
Sbjct: 312 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLI 363



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 58/189 (30%), Positives = 101/189 (53%), Gaps = 10/189 (5%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N    +P  + AL    
Sbjct: 77  FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN----KPEQIGALADQN 132

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 133 IVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 191

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 192 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 249

Query: 336 VALDSSGYV 344
            AL  SG V
Sbjct: 250 FALSLSGAV 258



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 65/195 (33%), Positives = 96/195 (49%), Gaps = 8/195 (4%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++ G +H L L ++   F+ G +  G LG G E     S  R+       + QV+A  
Sbjct: 187 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGG 246

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
            H+  +  SG VF  G N++   G  D  +R    P  V+ L+      ++ G   T  L
Sbjct: 247 AHSFALSLSGAVFAWGMNNAGQLGLSDEEDRE--SPCHVKLLRTQKVVYISCGEEHTAVL 304

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGNGV 289
           T  G V T G+ + GQLGH    D   P+ +  LE +GS V QIA G  + LA V  +G+
Sbjct: 305 TKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGL 362

Query: 290 VYSFGSGSNFCLGHG 304
           +Y+FG G+   LG G
Sbjct: 363 IYAFGCGARGQLGTG 377



 Score = 71.2 bits (173), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 48/140 (34%), Positives = 78/140 (55%), Gaps = 6/140 (4%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  P++   +     K+V  G N + FL   G V+TCG NT GQLGH    ++  P+ I 
Sbjct: 69  VAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK--PEQIG 126

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKG 322
            L +  ++V +A G S+ LA++  G ++S+G+GS+  LG     D +  PR IQ   ++ 
Sbjct: 127 ALAD-QNIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQT 185

Query: 323 IHVVRVSAGDEHVVALDSSG 342
           I  ++VS G+ H +AL + G
Sbjct: 186 I--LQVSCGNWHCLALAADG 203


>gi|326507328|dbj|BAJ95741.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 343

 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 115/228 (50%), Gaps = 5/228 (2%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           ++ G  H++ L++ + + + G    G LGHG    + V      F +      +  +++ 
Sbjct: 19  VSAGASHSVALLAGNVLCTWGRGEDGQLGHGDAEDRLVPTVISGFDAPGITSVICGADHT 78

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
            A+     QV++ G       GH ++   +F P+ V+AL+G+  KQ+  G +    +T+ 
Sbjct: 79  TAYSEDEHQVYSWGWGDFGRLGHGNSTD-VFTPQPVKALQGIKIKQLACGDSHCLAVTMA 137

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G V + G N +GQLG G T D   P++I   E + SV  IAAG  +  AVT +G +Y +G
Sbjct: 138 GEVLSWGRNQNGQLGLGTTEDSLLPQTIQAFEGI-SVKMIAAGAEHTAAVTEDGDIYGWG 196

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            G    LG G+++D   P  + +   +G  +V V+ G  H + + SSG
Sbjct: 197 WGRYGNLGLGDRNDRFVPEKVSSV--EGDKMVLVACGWRHTITVSSSG 242



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/233 (27%), Positives = 108/233 (46%), Gaps = 7/233 (3%)

Query: 112 GNMQITTGRYHTLLISNSS--VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           G   +  G  HT   S     V+S G    G LGHG  +T   +   +       + Q++
Sbjct: 67  GITSVICGADHTTAYSEDEHQVYSWGWGDFGRLGHG-NSTDVFTPQPVKALQGIKIKQLA 125

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
             ++H   V  +G+V + G N +   G   T   +  P+ ++A +G+  K + AG   T 
Sbjct: 126 CGDSHCLAVTMAGEVLSWGRNQNGQLGLGTTEDSLL-PQTIQAFEGISVKMIAAGAEHTA 184

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
            +T  G ++  G   +G LG GD  DR  P+ ++ +E    +V +A G  + + V+ +G 
Sbjct: 185 AVTEDGDIYGWGWGRYGNLGLGDRNDRFVPEKVSSVEG-DKMVLVACGWRHTITVSSSGS 243

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           +Y++G      LGHG+  D L P  ++  +       ++S G  H +AL S G
Sbjct: 244 LYTYGWSKYGQLGHGDFEDHLVPHKVEALKDS--STSQISGGWRHTMALTSDG 294



 Score = 77.8 bits (190), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 59/181 (32%), Positives = 87/181 (48%), Gaps = 5/181 (2%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           VV VSA  +H+  +L    + T G       GH D    +  P ++          V  G
Sbjct: 16  VVLVSAGASHSVALLAGNVLCTWGRGEDGQLGHGDAEDRLV-PTVISGFDAPGITSVICG 74

Query: 225 LNFTGFLTIRGH-VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            + T   +   H V++ G    G+LGHG++ D  TP+ +  L+ +  + Q+A G S+ LA
Sbjct: 75  ADHTTAYSEDEHQVYSWGWGDFGRLGHGNSTDVFTPQPVKALQGI-KIKQLACGDSHCLA 133

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           VT  G V S+G   N  LG G   D L P+ IQ F  +GI V  ++AG EH  A+   G 
Sbjct: 134 VTMAGEVLSWGRNQNGQLGLGTTEDSLLPQTIQAF--EGISVKMIAAGAEHTAAVTEDGD 191

Query: 344 V 344
           +
Sbjct: 192 I 192



 Score = 61.2 bits (147), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 51/171 (29%), Positives = 75/171 (43%), Gaps = 4/171 (2%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G  HT  ++ +  ++  G    G LG G    + V   +++      +V V+    H
Sbjct: 176 IAAGAEHTAAVTEDGDIYGWGWGRYGNLGLGDRNDRFVP-EKVSSVEGDKMVLVACGWRH 234

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V  SG ++T G +     GH D    +  P  VEALK     Q++ G   T  LT  
Sbjct: 235 TITVSSSGSLYTYGWSKYGQLGHGDFEDHLV-PHKVEALKDSSTSQISGGWRHTMALTSD 293

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
           G ++  G N  GQ+G GD  D  +P  +   EE   V Q+A G  + LA T
Sbjct: 294 GKLYGWGWNKFGQVGAGDNADHCSPAQVNFPEEQ-KVAQVACGWRHTLAFT 343



 Score = 40.0 bits (92), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 2/68 (2%)

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
           +VV ++AG S+ +A+    V+ ++G G +  LGHG+  D L P  I  F   GI    V 
Sbjct: 15  AVVLVSAGASHSVALLAGNVLCTWGRGEDGQLGHGDAEDRLVPTVISGFDAPGI--TSVI 72

Query: 330 AGDEHVVA 337
            G +H  A
Sbjct: 73  CGADHTTA 80


>gi|168035996|ref|XP_001770494.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162678202|gb|EDQ64663.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1125

 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 63/177 (35%), Positives = 91/177 (51%), Gaps = 7/177 (3%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  V+    HAA V + G+VFT G+ S    GH   +  +  P+LVEAL     + V  G
Sbjct: 311 VQYVACGGKHAALVTKQGEVFTWGEESGGRLGH-GVDCDVSHPQLVEALASSTTEVVACG 369

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYM 281
                 +T+ G ++T G  TH  G LGHG+ +    PK +  PLEEV  V  IA GP + 
Sbjct: 370 EYHGCAVTLSGDLYTWGDGTHSLGLLGHGNDISHWIPKRVNGPLEEV-RVASIACGPWHT 428

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             VT  G +++FG G+   LGH ++     PR +++   KG+  VR + G  H  A+
Sbjct: 429 AVVTTAGQLFTFGDGTFGVLGHNDRQSAYSPREVESL--KGLRTVRAACGVWHTAAV 483



 Score = 74.7 bits (182), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 70/282 (24%), Positives = 108/282 (38%), Gaps = 69/282 (24%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G YH   ++ S     +  G+   G+LGHG + +  +   R+N P     V  ++  
Sbjct: 366 VACGEYHGCAVTLSGDLYTWGDGTHSLGLLGHGNDISHWIP-KRVNGPLEEVRVASIACG 424

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H A V  +GQ+FT GD +    GH D  +  + PR VE+LKG+   +   G+  T  +
Sbjct: 425 PWHTAVVTTAGQLFTFGDGTFGVLGHND-RQSAYSPREVESLKGLRTVRAACGVWHTAAV 483

Query: 232 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE------------ 267
                          G + T G    G+LGHGD   R  P  +A L +            
Sbjct: 484 VEVMVGSSSASSCSSGKLFTWGDGDKGRLGHGDKEQRLVPTCVAALVDHNFRKVACGHSL 543

Query: 268 ------------VGS---------------------------VVQIAAGPSYMLAVTGNG 288
                       +GS                           V  IA G  ++  VT   
Sbjct: 544 TVALTTKGEVFTMGSSMFGQLGDPQADGKLPGMVEGRLVDAYVEDIACGAHHVACVTLKS 603

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
            VY++G G+N  LGHG+Q D   P  ++  + K +  +   A
Sbjct: 604 EVYTWGKGANGRLGHGDQEDRNTPTLVEALKEKQVKSIACGA 645



 Score = 44.7 bits (104), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 36/140 (25%), Positives = 66/140 (47%), Gaps = 4/140 (2%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E+   +  + V  G      +T +G V T G  + G+LGHG   D   P+ +  L 
Sbjct: 300 PKALESAIVLDVQYVACGGKHAALVTKQGEVFTWGEESGGRLGHGVDCDVSHPQLVEALA 359

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF--CLGHGEQHDELQPRAIQTFRRKGIH 324
              + V +A G  +  AVT +G +Y++G G++    LGHG       P+ +     + + 
Sbjct: 360 SSTTEV-VACGEYHGCAVTLSGDLYTWGDGTHSLGLLGHGNDISHWIPKRVNGPLEE-VR 417

Query: 325 VVRVSAGDEHVVALDSSGYV 344
           V  ++ G  H   + ++G +
Sbjct: 418 VASIACGPWHTAVVTTAGQL 437



 Score = 39.3 bits (90), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 46/104 (44%), Gaps = 2/104 (1%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L +   VF+ GSS+ G LG  P+    +          A+V  ++   +H A V    +V
Sbjct: 547 LTTKGEVFTMGSSMFGQLGD-PQADGKLPGMVEGRLVDAYVEDIACGAHHVACVTLKSEV 605

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
           +T G  ++   GH D       P LVEALK    K +  G  FT
Sbjct: 606 YTWGKGANGRLGHGD-QEDRNTPTLVEALKEKQVKSIACGATFT 648


>gi|242073146|ref|XP_002446509.1| hypothetical protein SORBIDRAFT_06g017130 [Sorghum bicolor]
 gi|241937692|gb|EES10837.1| hypothetical protein SORBIDRAFT_06g017130 [Sorghum bicolor]
          Length = 443

 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 68/228 (29%), Positives = 114/228 (50%), Gaps = 5/228 (2%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           ++ G  H++ L++ + + S G    G LGHG    + V      F +      +  +++ 
Sbjct: 19  VSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAPGITSVICGADHT 78

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
            A+     QV++ G       GH +++  +F P+ V+AL+G+  KQ+  G +    +T+ 
Sbjct: 79  TAYSEDELQVYSWGWGDFGRLGHGNSSD-VFTPQPVKALQGLKIKQIACGDSHCLAVTMA 137

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G V + G N +GQLG G T D   P+ I   E V  V  IAAG  +  AVT +G +Y +G
Sbjct: 138 GQVQSWGRNQNGQLGLGTTEDSLLPQKIQAFEGV-CVKMIAAGAEHTAAVTEDGDLYGWG 196

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            G    LG G+++D L P  + +   +G  +V V+ G  H + +  SG
Sbjct: 197 WGRYGNLGLGDRNDRLLPEKVSSV--EGEKMVLVACGWRHTITVSDSG 242



 Score = 72.0 bits (175), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 57/179 (31%), Positives = 85/179 (47%), Gaps = 5/179 (2%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           VV VSA  +H+  +L    + + G       GH D    +  P ++          V  G
Sbjct: 16  VVLVSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLV-PTVLSGFDAPGITSVICG 74

Query: 225 LNFT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            + T  +      V++ G    G+LGHG++ D  TP+ +  L+ +  + QIA G S+ LA
Sbjct: 75  ADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGL-KIKQIACGDSHCLA 133

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           VT  G V S+G   N  LG G   D L P+ IQ F  +G+ V  ++AG EH  A+   G
Sbjct: 134 VTMAGQVQSWGRNQNGQLGLGTTEDSLLPQKIQAF--EGVCVKMIAAGAEHTAAVTEDG 190



 Score = 67.4 bits (163), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 61/225 (27%), Positives = 101/225 (44%), Gaps = 6/225 (2%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI  G  H L ++ +  V S G +  G LG G  T   +   +I       V  ++A   
Sbjct: 123 QIACGDSHCLAVTMAGQVQSWGRNQNGQLGLG-TTEDSLLPQKIQAFEGVCVKMIAAGAE 181

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H A V + G ++  G       G  D N  +  P  V +++G     V  G   T  ++ 
Sbjct: 182 HTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLL-PEKVSSVEGEKMVLVACGWRHTITVSD 240

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G+++T G + +GQLGHGD  D   P  +  L++  ++ QI+ G  + +A+T  G +Y +
Sbjct: 241 SGNLYTYGWSKYGQLGHGDFEDHLVPHKLEALKD-STISQISGGWRHTMALTSEGKLYGW 299

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           G      +G G   D   P  +Q    +   + +V+ G  H +AL
Sbjct: 300 GWNKFGQVGVGNNDDHCSP--VQVHFPEDQKISQVACGWRHTLAL 342



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 92/208 (44%), Gaps = 4/208 (1%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G  HT  ++ +  ++  G    G LG G    + +   +++      +V V+    H
Sbjct: 176 IAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLLP-EKVSSVEGEKMVLVACGWRH 234

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V  SG ++T G +     GH D    +  P  +EALK     Q++ G   T  LT  
Sbjct: 235 TITVSDSGNLYTYGWSKYGQLGHGDFEDHLV-PHKLEALKDSTISQISGGWRHTMALTSE 293

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G ++  G N  GQ+G G+  D  +P  +    E   + Q+A G  + LA++    V+S+G
Sbjct: 294 GKLYGWGWNKFGQVGVGNNDDHCSPVQVH-FPEDQKISQVACGWRHTLALSEKKNVFSWG 352

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKG 322
            G++  LG+GE  D   P  I      G
Sbjct: 353 RGTSGQLGNGEIVDRNTPVLIDALSTDG 380



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/158 (27%), Positives = 71/158 (44%), Gaps = 7/158 (4%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HT+ +S+S ++++ G S  G LGHG      V   ++     + + Q+S    H
Sbjct: 228 VACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDHLVPH-KLEALKDSTISQISGGWRH 286

Query: 175 AAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
              +   G+++  G N       G+ D +    +    E  K     QV  G   T  L+
Sbjct: 287 TMALTSEGKLYGWGWNKFGQVGVGNNDDHCSPVQVHFPEDQK---ISQVACGWRHTLALS 343

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 270
            + +V + G  T GQLG+G+ +DR TP  I  L   GS
Sbjct: 344 EKKNVFSWGRGTSGQLGNGEIVDRNTPVLIDALSTDGS 381



 Score = 39.3 bits (90), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 2/68 (2%)

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
           +VV ++AG S+ +A+    V+ S+G G +  LGHG+  D L P  +  F   GI    V 
Sbjct: 15  TVVLVSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAPGI--TSVI 72

Query: 330 AGDEHVVA 337
            G +H  A
Sbjct: 73  CGADHTTA 80


>gi|356559685|ref|XP_003548128.1| PREDICTED: uncharacterized protein LOC100813700 [Glycine max]
          Length = 1120

 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 59/168 (35%), Positives = 90/168 (53%), Gaps = 7/168 (4%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           HA+ V + G+VFT G+ S  C GH    + + +PRLVEAL       V  G   +  +T+
Sbjct: 289 HASLVTRQGEVFTWGEESGGCLGH-GVGKNVVQPRLVEALTSTTVDFVACGEFHSCAVTM 347

Query: 234 RGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            G ++T G  TH  G LGHG  +    PK IA PLE +  +  +A GP +   VT  G +
Sbjct: 348 AGELYTWGDGTHNAGLLGHGSDVSHWIPKRIAGPLEGL-QIAFVACGPWHTALVTSTGQL 406

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           ++FG G+   LGHG++ +   PR +++    G+  + V+ G  H  A+
Sbjct: 407 FTFGDGTFGVLGHGDRQNVSYPREVESLL--GLRTIAVACGVWHTAAV 452



 Score = 84.7 bits (208), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 112/245 (45%), Gaps = 23/245 (9%)

Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTR--------------INFP 160
           +  G +HT L+ S   +F+ G    GVLGHG    Q VS+ R                  
Sbjct: 390 VACGPWHTALVTSTGQLFTFGDGTFGVLGHG--DRQNVSYPREVESLLGLRTIAVACGVW 447

Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
             A VV+V A+  H++  + SG++FT GD      GH D      +P  V AL      +
Sbjct: 448 HTAAVVEVIAT--HSSTSISSGKLFTWGDGDKNRLGHGD-KEARLKPTCVAALIDSNFHK 504

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           +  G + T  LT  G V T GS  +GQLG+  + D   P  +       S+ +IA G  +
Sbjct: 505 IACGHSLTAGLTKSGRVFTMGSTVYGQLGNPQS-DGKVPCLVGDKIARESIEEIACGAYH 563

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           +  +T    VY++G G+N  LGHG+  D   P  ++  + +  HV  ++ G  +  A+  
Sbjct: 564 VAVLTSKNEVYTWGKGANGRLGHGDIEDRKTPALVEALKDR--HVKYIACGSNYSAAICL 621

Query: 341 SGYVS 345
             +VS
Sbjct: 622 HKWVS 626



 Score = 68.6 bits (166), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 61/245 (24%), Positives = 104/245 (42%), Gaps = 31/245 (12%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSASE 172
           R+ +L+     VF+ G    G LGHG       P   + ++ T ++F        V+  E
Sbjct: 288 RHASLVTRQGEVFTWGEESGGCLGHGVGKNVVQPRLVEALTSTTVDF--------VACGE 339

Query: 173 NHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            H+  V  +G+++T GD  +++   GH          R+   L+G+    V  G   T  
Sbjct: 340 FHSCAVTMAGELYTWGDGTHNAGLLGHGSDVSHWIPKRIAGPLEGLQIAFVACGPWHTAL 399

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT----- 285
           +T  G + T G  T G LGHGD  +   P+ +  L  + ++  +A G  +  AV      
Sbjct: 400 VTSTGQLFTFGDGTFGVLGHGDRQNVSYPREVESLLGLRTIA-VACGVWHTAAVVEVIAT 458

Query: 286 ------GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
                  +G ++++G G    LGHG++   L+P  +        H  +++ G      L 
Sbjct: 459 HSSTSISSGKLFTWGDGDKNRLGHGDKEARLKPTCVAALIDSNFH--KIACGHSLTAGLT 516

Query: 340 SSGYV 344
            SG V
Sbjct: 517 KSGRV 521


>gi|168008673|ref|XP_001757031.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162691902|gb|EDQ78262.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 420

 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 74/231 (32%), Positives = 106/231 (45%), Gaps = 11/231 (4%)

Query: 116 ITTGRYHTLLISNSS--VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           IT G  HT   S S+  V+S G    G LGHG  +   +    I       + Q++  ++
Sbjct: 71  ITCGADHTTARSESTRTVYSWGWGDFGRLGHGNSSDLFIPRA-IKGLKGLEIKQIACGDS 129

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H   +   G+V + G N +   G   T   +  P  V A +G+  K + AG   T  +T 
Sbjct: 130 HCLAITGDGEVHSWGRNQNGQLGLGHT-EDVLVPNKVAAFEGIAVKMLAAGAEHTAAVTE 188

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIA--PLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G   +G LG GD  DR  P  +A  P E++  V   A G  + +AV  +G +Y
Sbjct: 189 SGKLYGWGWGRYGNLGLGDRNDRLVPGEVAAVPGEKMNLV---ACGWRHTIAVANSGNLY 245

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           +FG      LGHG+  D L P  +Q  + K I    VS G  H VALD  G
Sbjct: 246 TFGWSKYGQLGHGDFEDHLVPHQVQALKNKTIQA--VSGGWRHTVALDEDG 294



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 68/231 (29%), Positives = 116/231 (50%), Gaps = 7/231 (3%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + ++ G  HT+ L+S   V S G    G LGHG    + +    I+      +  ++   
Sbjct: 17  ISVSAGASHTVALLSGDLVCSWGRGEDGQLGHGDAEERHLPLV-ISALDDCEISSITCGA 75

Query: 173 NHAAFVLQSGQ-VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           +H     +S + V++ G       GH +++  +F PR ++ LKG+  KQ+  G +    +
Sbjct: 76  DHTTARSESTRTVYSWGWGDFGRLGHGNSS-DLFIPRAIKGLKGLEIKQIACGDSHCLAI 134

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           T  G VH+ G N +GQLG G T D   P  +A  E + +V  +AAG  +  AVT +G +Y
Sbjct: 135 TGDGEVHSWGRNQNGQLGLGHTEDVLVPNKVAAFEGI-AVKMLAAGAEHTAAVTESGKLY 193

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            +G G    LG G+++D L P  +     + +++  V+ G  H +A+ +SG
Sbjct: 194 GWGWGRYGNLGLGDRNDRLVPGEVAAVPGEKMNL--VACGWRHTIAVANSG 242



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 61/182 (33%), Positives = 89/182 (48%), Gaps = 11/182 (6%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V+ VSA  +H   +L    V + G       GH D       P ++ AL       +T G
Sbjct: 16  VISVSAGASHTVALLSGDLVCSWGRGEDGQLGHGDAEERHL-PLVISALDDCEISSITCG 74

Query: 225 LNFTGFLTIRGH----VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
            + T   T R      V++ G    G+LGHG++ D   P++I  L+ +  + QIA G S+
Sbjct: 75  ADHT---TARSESTRTVYSWGWGDFGRLGHGNSSDLFIPRAIKGLKGL-EIKQIACGDSH 130

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            LA+TG+G V+S+G   N  LG G   D L P  +  F  +GI V  ++AG EH  A+  
Sbjct: 131 CLAITGDGEVHSWGRNQNGQLGLGHTEDVLVPNKVAAF--EGIAVKMLAAGAEHTAAVTE 188

Query: 341 SG 342
           SG
Sbjct: 189 SG 190



 Score = 74.3 bits (181), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 60/209 (28%), Positives = 93/209 (44%), Gaps = 4/209 (1%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HT  ++ S  ++  G    G LG G    + V       P    +  V+    H
Sbjct: 176 LAAGAEHTAAVTESGKLYGWGWGRYGNLGLGDRNDRLVPGEVAAVP-GEKMNLVACGWRH 234

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V  SG ++T G +     GH D    +  P  V+ALK    + V+ G   T  L   
Sbjct: 235 TIAVANSGNLYTFGWSKYGQLGHGDFEDHLV-PHQVQALKNKTIQAVSGGWRHTVALDED 293

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G ++  G N  GQ+G G+T D  +PK I  +     V ++  G  + +A+T  G VYS+G
Sbjct: 294 GELYGWGWNKFGQVGCGNTDDHNSPKLITGIVNE-KVTRVTCGWRHTVAITDRGNVYSWG 352

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGI 323
            G++  LGHG+  D   P+ I+     G+
Sbjct: 353 RGTSGQLGHGDAVDRCVPKRIELLSADGL 381



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/168 (30%), Positives = 80/168 (47%), Gaps = 8/168 (4%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HT+ ++NS ++++ G S  G LGHG      V   ++       +  VS    H
Sbjct: 228 VACGWRHTIAVANSGNLYTFGWSKYGQLGHGDFEDHLVPH-QVQALKNKTIQAVSGGWRH 286

Query: 175 AAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
              + + G+++  G N      CG+ D +     P+L+  +      +VT G   T  +T
Sbjct: 287 TVALDEDGELYGWGWNKFGQVGCGNTDDHNS---PKLITGIVNEKVTRVTCGWRHTVAIT 343

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPS 279
            RG+V++ G  T GQLGHGD +DR  PK I  L   G   Q I + PS
Sbjct: 344 DRGNVYSWGRGTSGQLGHGDAVDRCVPKRIELLSADGLACQGIESSPS 391



 Score = 58.5 bits (140), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 43/125 (34%), Positives = 62/125 (49%), Gaps = 4/125 (3%)

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           V+AG + T  L     V + G    GQLGHGD  +R  P  I+ L++   +  I  G  +
Sbjct: 19  VSAGASHTVALLSGDLVCSWGRGEDGQLGHGDAEERHLPLVISALDDC-EISSITCGADH 77

Query: 281 MLAVT-GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
             A +     VYS+G G    LGHG   D   PRAI+    KG+ + +++ GD H +A+ 
Sbjct: 78  TTARSESTRTVYSWGWGDFGRLGHGNSSDLFIPRAIKGL--KGLEIKQIACGDSHCLAIT 135

Query: 340 SSGYV 344
             G V
Sbjct: 136 GDGEV 140


>gi|356991167|ref|NP_001239305.1| E3 ubiquitin-protein ligase HERC2 [Gallus gallus]
          Length = 4839

 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 69/237 (29%), Positives = 113/237 (47%), Gaps = 17/237 (7%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 169
           + G ++  L +N  VFS G    G LGHG       P+    +S  +    +  HVV ++
Sbjct: 503 SDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLISALSGKQ----AGKHVVHIA 558

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V+ G     
Sbjct: 559 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTI-PMLVTGLKGLKVIDVSCGSGDAQ 617

Query: 230 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
            L +   G V + G   +G+LG G +    TPK I  L+++  +V++  G  + +A+T +
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DIVKVRCGSQFSIALTKD 676

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G VY++G G N  LGHG +     P+ ++    KG  V+ V+AG  H +AL     V
Sbjct: 677 GQVYTWGKGDNQRLGHGTEEHVRYPKLLEGL--KGKKVIDVAAGSTHCLALTEDSEV 731



 Score = 90.1 bits (222), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 119/251 (47%), Gaps = 12/251 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4035 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4088

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV ++A   H+A +  +G +FT G       GH D+   + +P+LVEAL+G
Sbjct: 4089 VIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQL-KPKLVEALQG 4147

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L ++G VV+
Sbjct: 4148 YRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTDLG-VVK 4206

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4207 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4264

Query: 334  HVVALDSSGYV 344
            H V     G V
Sbjct: 4265 HCVCCTEDGEV 4275



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/228 (30%), Positives = 106/228 (46%), Gaps = 7/228 (3%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+   L  +  +FS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3060 GRHAMALTVDGKIFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAI 3118

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3119 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3177

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3178 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3236

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G V
Sbjct: 3237 DYFRLGHGTDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDTGQV 3282



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 67/221 (30%), Positives = 109/221 (49%), Gaps = 12/221 (5%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFT 186
             V++CG +  G LG G  ++  V   R     + +VV+   V +   HA  +   G++F+
Sbjct: 3016 KVYACGEATNGRLGLGI-SSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFS 3074

Query: 187  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
             G+      GH  +     +PRL+EALK    + +  G + +  +T  G ++T G   +G
Sbjct: 3075 WGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYG 3133

Query: 247  QLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGH 303
            +LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG 
Sbjct: 3134 RLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGR 3191

Query: 304  GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            G       P+ I+  R  G  V ++  G +  +AL  SG V
Sbjct: 3192 GGSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVV 3230



 Score = 74.7 bits (182), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 60/187 (32%), Positives = 96/187 (51%), Gaps = 20/187 (10%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           VVQ++ +E     + ++G+V+T   NS       DT      P+LV++L      ++ A 
Sbjct: 454 VVQIACAEKRFLILSRNGRVYTQAYNS-------DT----LGPQLVQSLASRNIVKIAAH 502

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V + G    G+LGHGDT+    PK I+ L  ++ G  VV IA G +
Sbjct: 503 SDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLISALSGKQAGKHVVHIACGST 562

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   D+  P  +     KG+ V+ VS  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGL--KGLKVIDVSCGSGDAQTLA 620

Query: 338 LDSSGYV 344
           +  +G V
Sbjct: 621 VTENGQV 627



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/190 (30%), Positives = 91/190 (47%), Gaps = 11/190 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2994 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSNYVV 3051

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G + + G    G+LGH   ++   P+ I  L +   +  IA 
Sbjct: 3052 KKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEAL-KTKRIRDIAC 3110

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3111 GSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3168

Query: 335  VVALDSSGYV 344
             +AL   G V
Sbjct: 3169 TLALTDEGLV 3178



 Score = 67.8 bits (164), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  I++S  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3108 IACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3166

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3167 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3225

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 3226 KSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDTGQVYA 3284

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3285 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3327



 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 78/162 (48%), Gaps = 5/162 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2964 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3022

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  + +A+T +G ++S+G G +  
Sbjct: 3023 ATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGK 3082

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            LGH  + +  +PR I+  + K I    ++ G  H  A+ SSG
Sbjct: 3083 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAAITSSG 3122



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 83/177 (46%), Gaps = 5/177 (2%)

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS--ASENHAAFV 178
           Y   + +   +++ G    G LGHG    Q +            V+ VS  + +     V
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGL-KGLKVIDVSCGSGDAQTLAV 621

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
            ++GQV++ GD      G R  +     P+L+E L+ +   +V  G  F+  LT  G V+
Sbjct: 622 TENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVY 680

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
           T G   + +LGHG       PK +  L+    V+ +AAG ++ LA+T +  V+S+GS
Sbjct: 681 TWGKGDNQRLGHGTEEHVRYPKLLEGLKG-KKVIDVAAGSTHCLALTEDSEVHSWGS 736



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 53/169 (31%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       +V+V      + 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDIVKVRCGSQFSI 671

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV+T G   +   GH  T   +  P+L+E LKG     V AG      LT    
Sbjct: 672 ALTKDGQVYTWGKGDNQRLGH-GTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSE 730

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 731 VHSWGSNDQCQ--HFDTLRITKPEPAALPGL-DTKHIVGIACGPAQSFA 776



 Score = 55.1 bits (131), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4157 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTDLGVVKVECGSQFSV 4215

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4216 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4274

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    + ++A G ++ LA
Sbjct: 4275 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKINRVACGSAHTLA 4320



 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122  HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 3168 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 3226

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SG V+T G    F  GH  T+  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 3227 SGVVWTWGKGDYFRLGH-GTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAW 3285

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 3286 GDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 3329



 Score = 47.8 bits (112), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 67/137 (48%), Gaps = 3/137 (2%)

Query: 207  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            P   EAL  +   Q+  G      +T  G ++  G    G+LG G T    TP  +  ++
Sbjct: 3981 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQ 4040

Query: 267  EVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
             V    V + +G  + LA++  G VYS+G   +  LGHG +    +PR I++ R  GI V
Sbjct: 4041 HVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLR--GIEV 4098

Query: 326  VRVSAGDEHVVALDSSG 342
            V ++AG  H   + ++G
Sbjct: 4099 VDIAAGGAHSACITAAG 4115



 Score = 40.8 bits (94), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 7/113 (6%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3957 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4012

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G V
Sbjct: 4013 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4065


>gi|332233500|ref|XP_003265940.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Nomascus leucogenys]
          Length = 1024

 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 70/208 (33%), Positives = 107/208 (51%), Gaps = 10/208 (4%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QIT G YH+L +S    +F+ G +L G LG G +     +   +   +   + Q+SA E
Sbjct: 141 IQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGE 200

Query: 173 NHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            H+  +  SG +++ G N       GH ++      P L+EAL     + +  G + +  
Sbjct: 201 AHSMALSMSGNIYSWGKNEFGQLGLGHTESKD---YPSLIEALDNQEVEFLACGGSHSAL 257

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGNG 288
           LT  G + T G+  HGQLGH  T +   P  +A L  VG+ V QIA G  + LA V+  G
Sbjct: 258 LTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAEL--VGNRVTQIACGRWHTLAYVSDLG 315

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
            V+SFGSG +  LG+G   D+L P  ++
Sbjct: 316 KVFSFGSGKDGQLGNGGTRDQLIPLPVK 343



 Score = 77.8 bits (190), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 50/173 (28%), Positives = 90/173 (52%), Gaps = 3/173 (1%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           ++Q++  + H+  + + G++F  G N     G          P++VE L GVP  Q++AG
Sbjct: 140 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAG 199

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
              +  L++ G++++ G N  GQLG G T  +  P  I  L+    V  +A G S+   +
Sbjct: 200 EAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDYPSLIEALDN-QEVEFLACGGSHSALL 258

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           T +G++++FG+G +  LGH    +EL+P  +      G  V +++ G  H +A
Sbjct: 259 TQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELV--GNRVTQIACGRWHTLA 309



 Score = 44.7 bits (104), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 60/131 (45%), Gaps = 14/131 (10%)

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP--LEEVGSV--VQIA 275
           Q+T G   +  L+  G +   G N HGQLG G    R  P +  P  +E +  V   QI+
Sbjct: 142 QITCGDYHSLALSKGGELFAWGQNLHGQLGVG----RKFPSTTTPQIVEHLAGVPLAQIS 197

Query: 276 AGPSYMLAVTGNGVVYSFGSGS--NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           AG ++ +A++ +G +YS+G        LGH E  D   P  I+    + +    ++ G  
Sbjct: 198 AGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKD--YPSLIEALDNQEVEF--LACGGS 253

Query: 334 HVVALDSSGYV 344
           H   L   G +
Sbjct: 254 HSALLTQDGLL 264


>gi|110825982|ref|NP_057407.2| E3 ISG15--protein ligase HERC5 [Homo sapiens]
 gi|296434523|sp|Q9UII4.2|HERC5_HUMAN RecName: Full=E3 ISG15--protein ligase HERC5; AltName:
           Full=Cyclin-E-binding protein 1; AltName: Full=HECT
           domain and RCC1-like domain-containing protein 5
 gi|119626425|gb|EAX06020.1| hect domain and RLD 5 [Homo sapiens]
          Length = 1024

 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 70/208 (33%), Positives = 105/208 (50%), Gaps = 10/208 (4%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QIT G YH+L +S    +F+ G +L G LG G +     +   +   +   + Q+SA E
Sbjct: 141 IQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGE 200

Query: 173 NHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            H+  +  SG +++ G N       GH ++      P L+E L     + V  G + +  
Sbjct: 201 AHSMALSMSGNIYSWGKNECGQLGLGHTESKDD---PSLIEGLDNQKVEFVACGGSHSAL 257

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLA-VTGNG 288
           LT  G + T G+  HGQLGH  T +   P  +A L  VG  V QIA G  + LA V+  G
Sbjct: 258 LTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAEL--VGYRVTQIACGRWHTLAYVSDLG 315

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
            V+SFGSG +  LG+G   D+L P  ++
Sbjct: 316 KVFSFGSGKDGQLGNGGTRDQLMPLPVK 343



 Score = 77.8 bits (190), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 50/173 (28%), Positives = 90/173 (52%), Gaps = 3/173 (1%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           ++Q++  + H+  + + G++F  G N     G          P++VE L GVP  Q++AG
Sbjct: 140 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAG 199

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
              +  L++ G++++ G N  GQLG G T  +  P  I  L+    V  +A G S+   +
Sbjct: 200 EAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDN-QKVEFVACGGSHSALL 258

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           T +G++++FG+G +  LGH    +EL+P  +      G  V +++ G  H +A
Sbjct: 259 TQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELV--GYRVTQIACGRWHTLA 309



 Score = 46.6 bits (109), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 61/131 (46%), Gaps = 14/131 (10%)

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP--LEEVGSV--VQIA 275
           Q+T G   +  L+  G +   G N HGQLG G    R  P +  P  +E +  V   QI+
Sbjct: 142 QITCGDYHSLALSKGGELFAWGQNLHGQLGVG----RKFPSTTTPQIVEHLAGVPLAQIS 197

Query: 276 AGPSYMLAVTGNGVVYSFGSGS--NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           AG ++ +A++ +G +YS+G        LGH E  D+  P  I+    + +    V+ G  
Sbjct: 198 AGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDD--PSLIEGLDNQKVEF--VACGGS 253

Query: 334 HVVALDSSGYV 344
           H   L   G +
Sbjct: 254 HSALLTQDGLL 264


>gi|6630609|dbj|BAA88519.1| cyclin-E binding protein 1 [Homo sapiens]
          Length = 1024

 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 70/208 (33%), Positives = 105/208 (50%), Gaps = 10/208 (4%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QIT G YH+L +S    +F+ G +L G LG G +     +   +   +   + Q+SA E
Sbjct: 141 IQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGE 200

Query: 173 NHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            H+  +  SG +++ G N       GH ++      P L+E L     + V  G + +  
Sbjct: 201 AHSMALSMSGNIYSWGKNECGQLGLGHTESKDD---PSLIEGLDNQKVEFVACGGSHSAL 257

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLA-VTGNG 288
           LT  G + T G+  HGQLGH  T +   P  +A L  VG  V QIA G  + LA V+  G
Sbjct: 258 LTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAEL--VGYRVTQIACGRWHTLAYVSDLG 315

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
            V+SFGSG +  LG+G   D+L P  ++
Sbjct: 316 KVFSFGSGKDGQLGNGGTRDQLMPLPVK 343



 Score = 77.8 bits (190), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 50/173 (28%), Positives = 90/173 (52%), Gaps = 3/173 (1%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           ++Q++  + H+  + + G++F  G N     G          P++VE L GVP  Q++AG
Sbjct: 140 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAG 199

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
              +  L++ G++++ G N  GQLG G T  +  P  I  L+    V  +A G S+   +
Sbjct: 200 EAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDN-QKVEFVACGGSHSALL 258

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           T +G++++FG+G +  LGH    +EL+P  +      G  V +++ G  H +A
Sbjct: 259 TQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELV--GYRVTQIACGRWHTLA 309



 Score = 46.6 bits (109), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 61/131 (46%), Gaps = 14/131 (10%)

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP--LEEVGSV--VQIA 275
           Q+T G   +  L+  G +   G N HGQLG G    R  P +  P  +E +  V   QI+
Sbjct: 142 QITCGDYHSLALSKGGELFAWGQNLHGQLGVG----RKFPSTTTPQIVEHLAGVPLAQIS 197

Query: 276 AGPSYMLAVTGNGVVYSFGSGS--NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           AG ++ +A++ +G +YS+G        LGH E  D+  P  I+    + +    V+ G  
Sbjct: 198 AGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDD--PSLIEGLDNQKVEF--VACGGS 253

Query: 334 HVVALDSSGYV 344
           H   L   G +
Sbjct: 254 HSALLTQDGLL 264


>gi|324502986|gb|ADY41305.1| E3 ubiquitin-protein ligase HERC4 [Ascaris suum]
          Length = 1038

 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 82/301 (27%), Positives = 124/301 (41%), Gaps = 50/301 (16%)

Query: 82  LLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCG 140
            LN  +GN  +  + +     S D V   A    I TG  HTL +++   V+SCGS+  G
Sbjct: 43  FLNGDDGNIVKTPQVVVGAPTSHDGVSVRA----IATGERHTLFLADDGKVWSCGSNENG 98

Query: 141 VLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSS-------- 192
            LG G       +   +      ++VQ++A   H   V   G++F  G NS         
Sbjct: 99  ELGRGGCQEGSFTIYPVLLSGGVNIVQIAAGRAHNMAVADDGRLFAWGSNSHGQLALPSN 158

Query: 193 -----------------------------------FCCGHRDTNRPIFRPRLVEALKGVP 217
                                              F  G +   R ++ P+ +E    +P
Sbjct: 159 ITSTDIPKRVVSLTETVQVACGTDHTIAIVESGRIFVWGLQPDGRVLYAPKEIEFFMALP 218

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG 277
             QV AG ++   LT+ G +   GSN +GQLG  D  +R TP  +  L  + +VV +A G
Sbjct: 219 VVQVNAGSDYYVALTVSGAMFVWGSNEYGQLGTSDNKERTTPAEVTTLHSL-NVVHVACG 277

Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            S+ +A+T  G ++  GS S   LG G +    Q   +      G HV RV+ G  H +A
Sbjct: 278 HSHTVALTHEGRLFVCGSDSCGQLGSGRKVPS-QNTMLAVTEMLGTHVTRVACGRCHTLA 336

Query: 338 L 338
           L
Sbjct: 337 L 337



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/179 (27%), Positives = 80/179 (44%), Gaps = 13/179 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  ++  E H  F+   G+V++CG N +   G        F    V    GV   Q+ AG
Sbjct: 70  VRAIATGERHTLFLADDGKVWSCGSNENGELGRGGCQEGSFTIYPVLLSGGVNIVQIAAG 129

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLG-HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
                 +   G +   GSN+HGQL    +      PK +  L E    VQ+A G  + +A
Sbjct: 130 RAHNMAVADDGRLFAWGSNSHGQLALPSNITSTDIPKRVVSLTE---TVQVACGTDHTIA 186

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           +  +G ++ +G   +  + +        P+ I+ F    + VV+V+AG ++ VAL  SG
Sbjct: 187 IVESGRIFVWGLQPDGRVLYA-------PKEIEFF--MALPVVQVNAGSDYYVALTVSG 236



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/134 (29%), Positives = 67/134 (50%), Gaps = 11/134 (8%)

Query: 215 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG--SVV 272
           GV  + +  G   T FL   G V +CGSN +G+LG G    +    +I P+   G  ++V
Sbjct: 67  GVSVRAIATGERHTLFLADDGKVWSCGSNENGELGRGGC--QEGSFTIYPVLLSGGVNIV 124

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGS--NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           QIAAG ++ +AV  +G ++++GS S     L       ++  R +          V+V+ 
Sbjct: 125 QIAAGRAHNMAVADDGRLFAWGSNSHGQLALPSNITSTDIPKRVVSL-----TETVQVAC 179

Query: 331 GDEHVVALDSSGYV 344
           G +H +A+  SG +
Sbjct: 180 GTDHTIAIVESGRI 193



 Score = 45.1 bits (105), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 75/164 (45%), Gaps = 13/164 (7%)

Query: 114 MQITTG-RYHTLLISNSSVFSCGSSLCGVLG--HGPETTQCVSFTRINFPSAAHVVQVSA 170
           +Q+  G  Y+  L  + ++F  GS+  G LG     E T     T ++   + +VV V+ 
Sbjct: 220 VQVNAGSDYYVALTVSGAMFVWGSNEYGQLGTSDNKERTTPAEVTTLH---SLNVVHVAC 276

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA---LKGVPCKQVTAGLNF 227
             +H   +   G++F CG +S   CG   + R +     + A   + G    +V  G   
Sbjct: 277 GHSHTVALTHEGRLFVCGSDS---CGQLGSGRKVPSQNTMLAVTEMLGTHVTRVACGRCH 333

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV 271
           T  L   G ++  G N+ GQLG G+   + TP+ I  L +V SV
Sbjct: 334 TLALA-GGKMYAFGLNSSGQLGSGNVRSQVTPRPIDALTDVVSV 376


>gi|187954501|gb|AAI40717.1| Hect domain and RLD 5 [Homo sapiens]
          Length = 1024

 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 70/208 (33%), Positives = 105/208 (50%), Gaps = 10/208 (4%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QIT G YH+L +S    +F+ G +L G LG G +     +   +   +   + Q+SA E
Sbjct: 141 IQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGE 200

Query: 173 NHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            H+  +  SG +++ G N       GH ++      P L+E L     + V  G + +  
Sbjct: 201 AHSMALSMSGNIYSWGKNECGQLGLGHTESKDD---PSLIEGLDNQKVEFVACGGSHSAL 257

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLA-VTGNG 288
           LT  G + T G+  HGQLGH  T +   P  +A L  VG  V QIA G  + LA V+  G
Sbjct: 258 LTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAEL--VGYRVTQIACGRWHTLAYVSDLG 315

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
            V+SFGSG +  LG+G   D+L P  ++
Sbjct: 316 KVFSFGSGKDGQLGNGGTRDQLMPLPVK 343



 Score = 77.8 bits (190), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 50/173 (28%), Positives = 90/173 (52%), Gaps = 3/173 (1%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           ++Q++  + H+  + + G++F  G N     G          P++VE L GVP  Q++AG
Sbjct: 140 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAG 199

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
              +  L++ G++++ G N  GQLG G T  +  P  I  L+    V  +A G S+   +
Sbjct: 200 EAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDN-QKVEFVACGGSHSALL 258

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           T +G++++FG+G +  LGH    +EL+P  +      G  V +++ G  H +A
Sbjct: 259 TQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELV--GYRVTQIACGRWHTLA 309



 Score = 46.6 bits (109), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 61/131 (46%), Gaps = 14/131 (10%)

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP--LEEVGSV--VQIA 275
           Q+T G   +  L+  G +   G N HGQLG G    R  P +  P  +E +  V   QI+
Sbjct: 142 QITCGDYHSLALSKGGELFAWGQNLHGQLGVG----RKFPSTTTPQIVEHLAGVPLAQIS 197

Query: 276 AGPSYMLAVTGNGVVYSFGSGS--NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           AG ++ +A++ +G +YS+G        LGH E  D+  P  I+    + +    V+ G  
Sbjct: 198 AGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDD--PSLIEGLDNQKVEF--VACGGS 253

Query: 334 HVVALDSSGYV 344
           H   L   G +
Sbjct: 254 HSALLTQDGLL 264


>gi|426344976|ref|XP_004039179.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Gorilla gorilla gorilla]
          Length = 1016

 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 70/208 (33%), Positives = 105/208 (50%), Gaps = 10/208 (4%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QIT G YH+L +S    +F+ G +L G LG G +     +   +   +   + Q+SA E
Sbjct: 141 IQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGE 200

Query: 173 NHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            H+  +  SG +++ G N       GH ++      P L+E L     + V  G + +  
Sbjct: 201 AHSMALSMSGNIYSWGKNEFGQLGLGHTESKD---YPSLIEGLDNQKVEFVACGGSHSAL 257

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLA-VTGNG 288
           LT  G + T G+  HGQLGH  T +   P  +A L  VG  V QIA G  + LA V+  G
Sbjct: 258 LTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAEL--VGYRVTQIACGRWHTLAYVSDLG 315

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
            V+SFGSG +  LG+G   D+L P  ++
Sbjct: 316 KVFSFGSGKDGQLGNGGTRDQLMPLPVK 343



 Score = 79.0 bits (193), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 91/180 (50%), Gaps = 3/180 (1%)

Query: 158 NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVP 217
           N      ++Q++  + H+  + + G++F  G N     G          P++VE L GVP
Sbjct: 133 NVLQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVP 192

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG 277
             Q++AG   +  L++ G++++ G N  GQLG G T  +  P  I  L+    V  +A G
Sbjct: 193 LAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDYPSLIEGLDN-QKVEFVACG 251

Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            S+   +T +G++++FG+G +  LGH    +EL+P  +      G  V +++ G  H +A
Sbjct: 252 GSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELV--GYRVTQIACGRWHTLA 309



 Score = 45.4 bits (106), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 63/143 (44%), Gaps = 14/143 (9%)

Query: 208 RLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP--L 265
           R    L+     Q+T G   +  L+  G +   G N HGQLG G    R  P +  P  +
Sbjct: 130 RFENVLQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVG----RKFPSTTTPQIV 185

Query: 266 EEVGSV--VQIAAGPSYMLAVTGNGVVYSFGSGS--NFCLGHGEQHDELQPRAIQTFRRK 321
           E +  V   QI+AG ++ +A++ +G +YS+G        LGH E  D   P  I+    +
Sbjct: 186 EHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKD--YPSLIEGLDNQ 243

Query: 322 GIHVVRVSAGDEHVVALDSSGYV 344
            +    V+ G  H   L   G +
Sbjct: 244 KVEF--VACGGSHSALLTQDGLL 264


>gi|255563857|ref|XP_002522929.1| uvb-resistance protein uvr8, putative [Ricinus communis]
 gi|223537856|gb|EEF39472.1| uvb-resistance protein uvr8, putative [Ricinus communis]
          Length = 437

 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 112/231 (48%), Gaps = 7/231 (3%)

Query: 114 MQITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS 171
           + +  G  HT+  S S   V+S G    G LGHG  ++   +   I       + Q++  
Sbjct: 69  ISVICGADHTIAYSESHTDVYSWGWGDFGRLGHG-NSSDLFTPQPIRQLHGLKIKQIACG 127

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           ++H   V   GQV + G N +   G   T   +  P+ ++A +GVP K V AG   T  +
Sbjct: 128 DSHCLAVTMEGQVQSWGRNQNGQLGLGTTEDSLV-PQKIQAFQGVPIKMVAAGAEHTAAV 186

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           T  G ++  G   +G LG GD  DR  P+ ++ L     +V +A G  + ++V+ +G +Y
Sbjct: 187 TEDGELYGWGWGRYGNLGLGDRKDRLVPEKVS-LPHGEKMVMVACGWRHTISVSSSGGLY 245

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           ++G      LGHG+  D L P  ++    +G  + ++S G  H +A+ S G
Sbjct: 246 TYGWSKYGQLGHGDYADHLIPHQLEAL--QGSFISQISGGWRHTMAVTSDG 294



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 64/209 (30%), Positives = 100/209 (47%), Gaps = 6/209 (2%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HT  ++ +  ++  G    G LG G    + V   +++ P    +V V+    H
Sbjct: 176 VAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRKDRLVP-EKVSLPHGEKMVMVACGWRH 234

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V  SG ++T G +     GH D    +  P  +EAL+G    Q++ G   T  +T  
Sbjct: 235 TISVSSSGGLYTYGWSKYGQLGHGDYADHLI-PHQLEALQGSFISQISGGWRHTMAVTSD 293

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
           G ++  G N  GQ+G GD +DR +P  +  PLE+   V+ I+ G  + LAVT    V+S+
Sbjct: 294 GKLYGWGWNKFGQVGVGDNVDRSSPVQVKLPLEQ--KVILISCGWRHTLAVTERQNVFSW 351

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           G G+N  LG+GE  D   P  I+     G
Sbjct: 352 GRGTNGQLGNGECTDRNVPVIIKALSVDG 380



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 60/179 (33%), Positives = 88/179 (49%), Gaps = 5/179 (2%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V+ +SA  +H+  +L    V T G       GH D    +  P ++  L+G+    V  G
Sbjct: 16  VLLISAGASHSVALLSGNVVCTWGRGEDGQLGHGDAQDRL-SPTILSTLEGLEIISVICG 74

Query: 225 LNFT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            + T  +      V++ G    G+LGHG++ D  TP+ I  L  +  + QIA G S+ LA
Sbjct: 75  ADHTIAYSESHTDVYSWGWGDFGRLGHGNSSDLFTPQPIRQLHGL-KIKQIACGDSHCLA 133

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           VT  G V S+G   N  LG G   D L P+ IQ F  +G+ +  V+AG EH  A+   G
Sbjct: 134 VTMEGQVQSWGRNQNGQLGLGTTEDSLVPQKIQAF--QGVPIKMVAAGAEHTAAVTEDG 190



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 56/107 (52%), Gaps = 4/107 (3%)

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV-VYSFGSGS 297
           T G    GQLGHGD  DR +P  ++ LE +  ++ +  G  + +A + +   VYS+G G 
Sbjct: 37  TWGRGEDGQLGHGDAQDRLSPTILSTLEGL-EIISVICGADHTIAYSESHTDVYSWGWGD 95

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              LGHG   D   P+ I+     G+ + +++ GD H +A+   G V
Sbjct: 96  FGRLGHGNSSDLFTPQPIRQLH--GLKIKQIACGDSHCLAVTMEGQV 140



 Score = 47.8 bits (112), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 74/165 (44%), Gaps = 11/165 (6%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + +  G  HT+ +S+S  +++ G S  G LGHG      +   ++     + + Q+S   
Sbjct: 226 VMVACGWRHTISVSSSGGLYTYGWSKYGQLGHGDYADHLIPH-QLEALQGSFISQISGGW 284

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ----VTAGLNFT 228
            H   V   G+++  G N     G  D    + R   V+    +P +Q    ++ G   T
Sbjct: 285 RHTMAVTSDGKLYGWGWNKFGQVGVGDN---VDRSSPVQVK--LPLEQKVILISCGWRHT 339

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
             +T R +V + G  T+GQLG+G+  DR  P  I  L   GS  Q
Sbjct: 340 LAVTERQNVFSWGRGTNGQLGNGECTDRNVPVIIKALSVDGSCGQ 384


>gi|357609796|gb|EHJ66680.1| hypothetical protein KGM_08790 [Danaus plexippus]
          Length = 479

 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 76/246 (30%), Positives = 110/246 (44%), Gaps = 28/246 (11%)

Query: 122 HTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           H++LIS     +S G + CG LG G  TT+ +    I      +++  +   NH+ FV  
Sbjct: 122 HSILISAEGEAYSFGRNSCGQLGFGDTTTRNIP-EPIPTLKGFNIIHAAVGRNHSLFVTD 180

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           +G V+ CGDN S  CG   T   I  P  V    G P  +V  G  F+  L   G +H+ 
Sbjct: 181 TGTVYACGDNKSAQCGLGHTTPQILVPTRVR-YTGAPIVKVGCGAEFSMILDCNGALHSF 239

Query: 241 GSNTHGQLGH---GDTLDRPT---------PKSIA------------PLEEVGSVVQIAA 276
           G   +GQLGH   G      T         PK IA            P+++V  +V  + 
Sbjct: 240 GLPEYGQLGHNTDGKYFVTSTKLSYHFEMVPKHIAFFFEKSKDGHVSPVKDV-DIVDFSC 298

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
           G ++ +A+      YS+G G    LGH EQ DE  PR I+ F  +   V  V  G  + +
Sbjct: 299 GNNHTVAIDSKKRAYSWGFGGFGRLGHAEQRDESVPRLIKYFDSQARGVRSVHCGATYSL 358

Query: 337 ALDSSG 342
           A++  G
Sbjct: 359 AVNEHG 364



 Score = 42.0 bits (97), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 55/247 (22%), Positives = 98/247 (39%), Gaps = 32/247 (12%)

Query: 119 GRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN---- 173
           GR H+L ++++ +V++CG +     G G  T Q +  TR+ + + A +V+V         
Sbjct: 171 GRNHSLFVTDTGTVYACGDNKSAQCGLGHTTPQILVPTRVRY-TGAPIVKVGCGAEFSMI 229

Query: 174 -------HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRL------------VEALK 214
                  H+  + + GQ+    D   F    + +      P+             V  +K
Sbjct: 230 LDCNGALHSFGLPEYGQLGHNTDGKYFVTSTKLSYHFEMVPKHIAFFFEKSKDGHVSPVK 289

Query: 215 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE-EVGSVVQ 273
            V     + G N T  +  +   ++ G    G+LGH +  D   P+ I   + +   V  
Sbjct: 290 DVDIVDFSCGNNHTVAIDSKKRAYSWGFGGFGRLGHAEQRDESVPRLIKYFDSQARGVRS 349

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           +  G +Y LAV  +G ++ FG         GE +  + P+ +Q      I  V  S    
Sbjct: 350 VHCGATYSLAVNEHGALFMFGQTKR----TGEAN--MYPKPVQDLTGWNIRSVGTSNTSI 403

Query: 334 HVVALDS 340
            + A DS
Sbjct: 404 VIAADDS 410


>gi|302817810|ref|XP_002990580.1| hypothetical protein SELMODRAFT_185380 [Selaginella moellendorffii]
 gi|300141748|gb|EFJ08457.1| hypothetical protein SELMODRAFT_185380 [Selaginella moellendorffii]
          Length = 863

 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 59/177 (33%), Positives = 94/177 (53%), Gaps = 7/177 (3%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++    HAA V + G+VF+ G+ S    GH   +  +  P+L+++L     + V  G
Sbjct: 125 VQQIACGVRHAALVTRQGEVFSWGEESGGRLGH-GVDADVAHPQLIDSLASSTVQYVACG 183

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYM 281
              +  +T  G ++T G  TH  G LGHG+ +   TPK +  PLE V  V  +A GP + 
Sbjct: 184 EYHSCAVTQSGDLYTWGDGTHNFGLLGHGNNISHWTPKRVGGPLEGV-RVSSVACGPWHT 242

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           + VT  G ++SFG G+   LGHG++     PR +++   KG+  +R + G  H  A+
Sbjct: 243 VLVTSTGQLFSFGDGTFGVLGHGDRKSASMPREVESL--KGLKTLRAACGPWHTAAV 297



 Score = 80.9 bits (198), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 73/238 (30%), Positives = 113/238 (47%), Gaps = 24/238 (10%)

Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETT-----QCVSFTRINFPSAA------ 163
           +  G +HT+L+ S   +FS G    GVLGHG   +     +  S   +    AA      
Sbjct: 235 VACGPWHTVLVTSTGQLFSFGDGTFGVLGHGDRKSASMPREVESLKGLKTLRAACGPWHT 294

Query: 164 -HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
             VV+V +  ++A   L SG++FT GD      GH D  + +  P  V AL     +QV 
Sbjct: 295 AAVVEVMSRYSNAGSSL-SGKLFTWGDGDKNRLGHGDKEQKLV-PTCVAALVDHNFRQVA 352

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV--QIAAGPSY 280
            G + T  LT  GH++T GS ++GQLG      R     +  +  +G  +  +++ G  +
Sbjct: 353 CGHSLTVALTTTGHLYTMGSVSYGQLGDPQATGR-----LPGVLRLGRTLIEEVSCGAYH 407

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           + A+T  G V ++G G+N  LGHG+  D   P  ++  R K   V +VS G     A+
Sbjct: 408 VAALTSKGDVCTWGKGANGRLGHGDAEDRDVPSLVEALRDK--QVKKVSCGSSFTSAI 463



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 70/247 (28%), Positives = 111/247 (44%), Gaps = 21/247 (8%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSAS 171
            QI  G  H  L++    VFS G    G LGHG +    V+  ++    A+  VQ V+  
Sbjct: 126 QQIACGVRHAALVTRQGEVFSWGEESGGRLGHGVDAD--VAHPQLIDSLASSTVQYVACG 183

Query: 172 ENHAAFVLQSGQVFTCGDNS-SFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTG 229
           E H+  V QSG ++T GD + +F       N   + P+ V   L+GV    V  G   T 
Sbjct: 184 EYHSCAVTQSGDLYTWGDGTHNFGLLGHGNNISHWTPKRVGGPLEGVRVSSVACGPWHTV 243

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG--- 286
            +T  G + + G  T G LGHGD      P+ +  L+ +   ++ A GP +  AV     
Sbjct: 244 LVTSTGQLFSFGDGTFGVLGHGDRKSASMPREVESLKGL-KTLRAACGPWHTAAVVEVMS 302

Query: 287 ---------NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
                    +G ++++G G    LGHG++  +L P  +           +V+ G    VA
Sbjct: 303 RYSNAGSSLSGKLFTWGDGDKNRLGHGDKEQKLVPTCVAALVDHNFR--QVACGHSLTVA 360

Query: 338 LDSSGYV 344
           L ++G++
Sbjct: 361 LTTTGHL 367



 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/143 (32%), Positives = 73/143 (51%), Gaps = 6/143 (4%)

Query: 205 FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
           F PR V +L  +  +Q+  G+     +T +G V + G  + G+LGHG   D   P+ I  
Sbjct: 112 FLPRAVRSLVVLDVQQIACGVRHAALVTRQGEVFSWGEESGGRLGHGVDADVAHPQLIDS 171

Query: 265 LEEVGSVVQ-IAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPRAIQTFRRK 321
           L    S VQ +A G  +  AVT +G +Y++G G+ NF  LGHG       P+ +     +
Sbjct: 172 L--ASSTVQYVACGEYHSCAVTQSGDLYTWGDGTHNFGLLGHGNNISHWTPKRVGG-PLE 228

Query: 322 GIHVVRVSAGDEHVVALDSSGYV 344
           G+ V  V+ G  H V + S+G +
Sbjct: 229 GVRVSSVACGPWHTVLVTSTGQL 251


>gi|356534059|ref|XP_003535575.1| PREDICTED: uncharacterized protein LOC100783270 [Glycine max]
          Length = 1120

 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 59/177 (33%), Positives = 93/177 (52%), Gaps = 7/177 (3%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V+Q++    HAA V + G++FT G+ S    GH    + + +PRLVEA+       V  G
Sbjct: 281 VLQIACGVKHAALVTRQGELFTWGEESGGRLGH-GVGKNVIQPRLVEAMASTTVDFVACG 339

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
              T  +T+ G ++T G  TH  G LGHG  +    PK IA PLE +  V  +  GP + 
Sbjct: 340 EFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRIAGPLEGL-QVALVTCGPWHT 398

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             +T  G +++FG G+   LGHG++ +   PR +++    G+  + V+ G  H  A+
Sbjct: 399 ALITSTGQLFTFGDGTFGVLGHGDRENVSYPREVESL--SGLRTIAVACGVWHTAAV 453



 Score = 81.6 bits (200), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 71/243 (29%), Positives = 114/243 (46%), Gaps = 19/243 (7%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           +T G +HT LI+++  +F+ G    GVLGHG    + VS+ R +   S    + V+    
Sbjct: 391 VTCGPWHTALITSTGQLFTFGDGTFGVLGHGDR--ENVSYPREVESLSGLRTIAVACGVW 448

Query: 174 HAAFVLQ-----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           H A V++           S ++FT GD      GH D +  +  P  V  L      ++ 
Sbjct: 449 HTAAVVEVIVTQSSASVSSDKLFTWGDGDKNRLGHGDKDARL-EPTCVSLLIDSNFHRIA 507

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
            G + T  LT  G V T GS+ +GQLG+  + D   P  +       SV +IA G  ++ 
Sbjct: 508 CGHSLTVGLTTSGEVFTMGSSVYGQLGNPQS-DGKVPCLVKDKLAGESVEEIACGAYHVA 566

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            +T    VY++G G+N  LGHG+  D   P  ++  + +  HV  ++ G  +  A+    
Sbjct: 567 VLTSKNEVYTWGKGANGRLGHGDVEDRKTPTLVEALKDR--HVKYIACGSNYSAAICLHK 624

Query: 343 YVS 345
           +VS
Sbjct: 625 WVS 627



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 67/141 (47%), Gaps = 4/141 (2%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           I  PR +E+   +   Q+  G+     +T +G + T G  + G+LGHG   +   P+ + 
Sbjct: 267 ILLPRPLESNVVLDVLQIACGVKHAALVTRQGELFTWGEESGGRLGHGVGKNVIQPRLVE 326

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRK 321
            +    +V  +A G  +  AVT  G +Y++G G++    LGHG       P+ I     +
Sbjct: 327 AMAST-TVDFVACGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRI-AGPLE 384

Query: 322 GIHVVRVSAGDEHVVALDSSG 342
           G+ V  V+ G  H   + S+G
Sbjct: 385 GLQVALVTCGPWHTALITSTG 405


>gi|167518173|ref|XP_001743427.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163778526|gb|EDQ92141.1| predicted protein [Monosiga brevicollis MX1]
          Length = 1024

 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 71/229 (31%), Positives = 113/229 (49%), Gaps = 11/229 (4%)

Query: 119 GRYHTLLISNSS-VFSCGSSLCGVLGH-GPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           G YH+LL++    V+S G +    LG  GP       F RI     A + QV+A E+ + 
Sbjct: 40  GAYHSLLVTTDGLVYSAGKNDHRQLGRSGPAGI----FKRIEAIEVASIRQVAAGEDFSL 95

Query: 177 FVLQSGQVFT--CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
            +   G+V+    G+     CG + +      P+++ +L  VP   ++ G      L+  
Sbjct: 96  MLDDRGKVYAVGAGERGQLGCGRQTSEEGHRVPKIIRSLHDVPIVALSVGGRHALALSAS 155

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
             V   G N +GQLG+G  +    P  I  L   G VV +AAG  + LA+T    +Y+FG
Sbjct: 156 SIVFAWGENANGQLGNGHFVPSYQPTPIPELNGRG-VVGLAAGRQHSLALTAASELYAFG 214

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           +  +  LG G+    L+P  ++   RKG+  V+VSAGD H +A  ++G+
Sbjct: 215 ANEHGQLGVGDTKPRLRPELVRAALRKGL--VKVSAGDFHSLARSATGH 261



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 101/227 (44%), Gaps = 27/227 (11%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG--PETT 149
           RV + ++S+ H   IV  S G      GR+   L ++S VF+ G +  G LG+G    + 
Sbjct: 126 RVPKIIRSL-HDVPIVALSVG------GRHALALSASSIVFAWGENANGQLGNGHFVPSY 178

Query: 150 QCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRL 209
           Q      +N      VV ++A   H+  +  + +++  G N     G  DT +P  RP L
Sbjct: 179 QPTPIPELN---GRGVVGLAAGRQHSLALTAASELYAFGANEHGQLGVGDT-KPRLRPEL 234

Query: 210 VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEV 268
           V A       +V+AG   +   +  GH    G N  GQ G GD  D    P+ I  ++E 
Sbjct: 235 VRAALRKGLVKVSAGDFHSLARSATGHAFAWGGNQWGQCGVGDDADAILLPREIDSVQEH 294

Query: 269 GSVVQIAAGP--SYMLAVTGN-----------GVVYSFGSGSNFCLG 302
           G +  IA G   S +L VT N            ++++FG+ S   LG
Sbjct: 295 GHIADIATGKRHSVLLVVTSNQTTPTPSTFHKQLLFTFGANSLAQLG 341


>gi|379318635|pdb|4DNW|A Chain A, Crystal Structure Of Uvb-Resistance Protein Uvr8
 gi|379318636|pdb|4DNW|B Chain B, Crystal Structure Of Uvb-Resistance Protein Uvr8
          Length = 374

 Score = 91.3 bits (225), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 71/229 (31%), Positives = 115/229 (50%), Gaps = 7/229 (3%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I+ G  H++ L+S   V S G    G LGHG +     S T+++      +V V+   +H
Sbjct: 9   ISAGASHSVALLSGDIVCSWGRGEDGQLGHG-DAEDRPSPTQLSALDGHQIVSVTCGADH 67

Query: 175 AAFVLQSG-QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
                QSG +V++ G       GH +++  +F P  ++AL G+  KQ+  G +    +T+
Sbjct: 68  TVAYSQSGMEVYSWGWGDFGRLGHGNSS-DLFTPLPIKALHGIRIKQIACGDSHCLAVTM 126

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V + G N +GQLG GDT D   P+ I   E +  +  +AAG  +  AVT +G +Y +
Sbjct: 127 EGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGI-RIKMVAAGAEHTAAVTEDGDLYGW 185

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           G G    LG G++ D L P  + +    G  +  V+ G  H +++  SG
Sbjct: 186 GWGRYGNLGLGDRTDRLVPERVTS--TGGEKMSMVACGWRHTISVSYSG 232



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 65/180 (36%), Positives = 90/180 (50%), Gaps = 7/180 (3%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTA 223
           V+ +SA  +H+  +L    V + G       GH D  +RP   P  + AL G     VT 
Sbjct: 6   VLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRP--SPTQLSALDGHQIVSVTC 63

Query: 224 GLNFTGFLTIRG-HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
           G + T   +  G  V++ G    G+LGHG++ D  TP  I  L  +  + QIA G S+ L
Sbjct: 64  GADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGI-RIKQIACGDSHCL 122

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           AVT  G V S+G   N  LG G+  D L P+ IQ F  +GI +  V+AG EH  A+   G
Sbjct: 123 AVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAF--EGIRIKMVAAGAEHTAAVTEDG 180



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 96/209 (45%), Gaps = 6/209 (2%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HT  ++ +  ++  G    G LG G  T + V   R+       +  V+    H
Sbjct: 166 VAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVP-ERVTSTGGEKMSMVACGWRH 224

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V  SG ++T G +     GH D    +  P  +EAL      Q++ G   T  LT  
Sbjct: 225 TISVSYSGALYTYGWSKYGQLGHGDLEDHLI-PHKLEALSNSFISQISGGWRHTMALTSD 283

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
           G ++  G N  GQ+G G+ LD+ +P  +  P ++   VVQ++ G  + LAVT    V+++
Sbjct: 284 GKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQ--KVVQVSCGWRHTLAVTERNNVFAW 341

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           G G+N  LG GE  D   P+ I+     G
Sbjct: 342 GRGTNGQLGIGESVDRNFPKIIEALSVDG 370



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 76/162 (46%), Gaps = 9/162 (5%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HT+ +S S ++++ G S  G LGHG      +   ++   S + + Q+S    H
Sbjct: 218 VACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPH-KLEALSNSFISQISGGWRH 276

Query: 175 AAFVLQSGQVFTCGDNSSFCCG---HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
              +   G+++  G N     G   + D   P+ + R  +  K V   QV+ G   T  +
Sbjct: 277 TMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPV-QVRFPDDQKVV---QVSCGWRHTLAV 332

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           T R +V   G  T+GQLG G+++DR  PK I  L   G+  Q
Sbjct: 333 TERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALSVDGASGQ 374


>gi|449270679|gb|EMC81336.1| putative E3 ubiquitin-protein ligase HERC3 [Columba livia]
          Length = 1050

 Score = 91.3 bits (225), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 67/242 (27%), Positives = 117/242 (48%), Gaps = 13/242 (5%)

Query: 102 HSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS 161
           H  ++ E + G      G +   L+ +  V++CG +  G LGH  E ++     +I   +
Sbjct: 32  HDRNVKEVACG------GNHSVFLLEDGEVYTCGLNTKGQLGHDCEGSKP---EQIGALA 82

Query: 162 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
             H+V V+  E+H+  +   GQ+F+ G  S    G       +  PRL++ L      QV
Sbjct: 83  GQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQV 142

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           + G      L   G   T G N++GQLG G +   + +P+ +  L+ +  + Q+AAG ++
Sbjct: 143 SCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGI-PLAQVAAGGAH 201

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
             A++ +G V+ +G  S+  LG  ++ D   P  ++  R +   VV +S G+EH   L  
Sbjct: 202 SFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQ--KVVYISCGEEHTAVLTK 259

Query: 341 SG 342
           SG
Sbjct: 260 SG 261



 Score = 88.2 bits (217), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 72/233 (30%), Positives = 109/233 (46%), Gaps = 5/233 (2%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + +  G  H+L +S+   +FS G+   G LG             I   +   ++QVS   
Sbjct: 87  VHVACGESHSLALSDQGQLFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQVSCGN 146

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H   +   GQ FT G NS    G          P+ V++L G+P  QV AG   +  L+
Sbjct: 147 WHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALS 206

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
           + G V   G N+ GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V++
Sbjct: 207 LSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRS-QKVVYISCGEEHTAVLTKSGGVFT 265

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYV 344
           FG+GS   LGH   +DE+ PR +      G  V +++ G  H +A + SSG +
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVSQIACGRHHTLAFVPSSGMI 316



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 67/194 (34%), Positives = 95/194 (48%), Gaps = 6/194 (3%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++ G +H L L ++   F+ G +  G LG G E     S  R+       + QV+A  
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG VF  G NSS   G  D  R    P  V+ L+      ++ G   T  LT
Sbjct: 200 AHSFALSLSGAVFGWGKNSSGQLGLSD-ERDRESPCHVKLLRSQKVVYISCGEEHTAVLT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGNGVV 290
             G V T G+ + GQLGH    D   P+ +  LE +GS V QIA G  + LA V  +G++
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVSQIACGRHHTLAFVPSSGMI 316

Query: 291 YSFGSGSNFCLGHG 304
           Y+FG G+   LG G
Sbjct: 317 YAFGCGTRGQLGTG 330



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/150 (32%), Positives = 67/150 (44%), Gaps = 4/150 (2%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+  G  H+  +S S +VF  G +  G LG   E  +  S   +    +  VV +S  E 
Sbjct: 194 QVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDR-ESPCHVKLLRSQKVVYISCGEE 252

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFLT 232
           H A + +SG VFT G  S    GH   N  +  PR V  L G    Q+  G + T  F+ 
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV-NPRRVLELMGSEVSQIACGRHHTLAFVP 311

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
             G ++  G  T GQLG G T +   P  +
Sbjct: 312 SSGMIYAFGCGTRGQLGTGHTCNVKCPSPV 341


>gi|195482069|ref|XP_002101897.1| GE17877 [Drosophila yakuba]
 gi|194189421|gb|EDX03005.1| GE17877 [Drosophila yakuba]
          Length = 2660

 Score = 91.3 bits (225), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 76/229 (33%), Positives = 108/229 (47%), Gaps = 9/229 (3%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAF 177
            G++   L  +  VFS G    G LGHG  TT  +   R +    A  +  V+   +H+A 
Sbjct: 828  GKHALALTLDGKVFSWGEGEDGKLGHGNRTT--LDKPRLVEALRAKKIRDVACGSSHSAA 885

Query: 178  VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRG 235
            +   G+++T G       GH D N    +P+LV AL G    QV  G     T  LT  G
Sbjct: 886  ISSQGELYTWGLGEYGRLGHGD-NATQLKPKLVTALAGRRVVQVACGSRDAQTLALTEDG 944

Query: 236  HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
             V + G    G+LG G +    TP  I  L  +G VVQI  G  + LA+T  G V+++G 
Sbjct: 945  AVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIG-VVQIECGAQFSLALTRAGEVWTWGK 1003

Query: 296  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            G  + LGHG      +P+ I   R  G  V+ V+ G  H +A+  +G V
Sbjct: 1004 GDYYRLGHGGDQHVRKPQPIGGLR--GRRVIHVAVGALHCLAVTDAGQV 1050



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 73/238 (30%), Positives = 111/238 (46%), Gaps = 14/238 (5%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVS 169
           + I  G     ++S +  V++CG    G LG G   T  V       +        V V 
Sbjct: 768 IHIAGGSKSLFIVSQDGKVYACGEGTNGRLGLG--VTHNVPLPHQLPVLHQYVVKKVAVH 825

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFT 228
           +   HA  +   G+VF+ G+      GH   NR    +PRLVEAL+    + V  G + +
Sbjct: 826 SGGKHALALTLDGKVFSWGEGEDGKLGH--GNRTTLDKPRLVEALRAKKIRDVACGSSHS 883

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG--PSYMLAVTG 286
             ++ +G ++T G   +G+LGHGD   +  PK +  L     VVQ+A G   +  LA+T 
Sbjct: 884 AAISSQGELYTWGLGEYGRLGHGDNATQLKPKLVTALAGR-RVVQVACGSRDAQTLALTE 942

Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           +G V+S+G G    LG G       P  I+  R  GI VV++  G +  +AL  +G V
Sbjct: 943 DGAVFSWGDGDFGKLGRGGSEGSDTPHEIE--RLSGIGVVQIECGAQFSLALTRAGEV 998



 Score = 78.2 bits (191), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 57/181 (31%), Positives = 88/181 (48%), Gaps = 6/181 (3%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAG 224
            V V++   H   +   G+V+  G+      GH   NR  + RP+LVE L G+    +  G
Sbjct: 1887 VAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH--GNRMSYDRPKLVEHLNGMSVADIACG 1944

Query: 225  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLA 283
               +  +T  GHV T G   +G+LGHGD+ D+  PK +  L    ++ +   +G +  L 
Sbjct: 1945 SAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLC 2004

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I++    G+ VV+V  G +  VAL  SG 
Sbjct: 2005 ITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESL--AGLGVVKVECGSQFSVALTKSGA 2062

Query: 344  V 344
            V
Sbjct: 2063 V 2063



 Score = 68.9 bits (167), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 73/287 (25%), Positives = 113/287 (39%), Gaps = 66/287 (22%)

Query: 113  NMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQV 168
             + + +G  H L L +   V++ G    G LGHG      +S+ R   +   +   V  +
Sbjct: 1886 KVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNR----MSYDRPKLVEHLNGMSVADI 1941

Query: 169  SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG------------- 215
            +    H+A +  SG V T G       GH D+   + RP+LVEAL G             
Sbjct: 1942 ACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQL-RPKLVEALLGYRAIDIACGSGDA 2000

Query: 216  -------------------------------VPCK----------QVTAGLNFTGFLTIR 234
                                           +P K          +V  G  F+  LT  
Sbjct: 2001 QTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKS 2060

Query: 235  GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
            G V+T G     +LGHG       PK +A L+    ++ IA G  + +A + +G VY++G
Sbjct: 2061 GAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQG-KKIISIATGSLHCVACSDSGEVYTWG 2119

Query: 295  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
                  LG G      +PR +     +G H+V+V+ G  H +AL +S
Sbjct: 2120 DNDEGQLGDGTVTAIQRPRLVAAL--QGKHIVKVTCGSAHTLALSTS 2164



 Score = 64.7 bits (156), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 96/225 (42%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            +  G  H+  IS+   +++ G    G LGHG   TQ +    +   +   VVQV+     
Sbjct: 876  VACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQ-LKPKLVTALAGRRVVQVACGSRD 934

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    + + G VF+ GD      G R  +     P  +E L G+   Q+  G  F+  LT
Sbjct: 935  AQTLALTEDGAVFSWGDGDFGKLG-RGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALT 993

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG       P+ I  L     V+ +A G  + LAVT  G VY+
Sbjct: 994  RAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGR-RVIHVAVGALHCLAVTDAGQVYA 1052

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G G      +P  +       + V RV+ G  H +A
Sbjct: 1053 WGDNDHGQQGSGNTFVNKKPALVIGL--DAVFVNRVACGSSHSIA 1095


>gi|326913714|ref|XP_003203179.1| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Meleagris
           gallopavo]
          Length = 4815

 Score = 91.3 bits (225), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 69/237 (29%), Positives = 113/237 (47%), Gaps = 17/237 (7%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 169
           + G ++  L +N  VFS G    G LGHG       P+    +S  +    +  HVV ++
Sbjct: 479 SDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLISALSGKQ----AGKHVVHIA 534

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V+ G     
Sbjct: 535 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTI-PMLVTGLKGLKVIDVSCGSGDAQ 593

Query: 230 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
            L +   G V + G   +G+LG G +    TPK I  L+++  +V++  G  + +A+T +
Sbjct: 594 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DIVKVRCGSQFSIALTKD 652

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G VY++G G N  LGHG +     P+ ++    KG  V+ V+AG  H +AL     V
Sbjct: 653 GQVYTWGKGDNQRLGHGTEEHVRYPKLLEGL--KGKKVIDVAAGSTHCLALTEDSEV 707



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 118/251 (47%), Gaps = 12/251 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4011 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4064

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV ++A   H+A +  +G +FT G       GH D+   + +P+LVEAL+G
Sbjct: 4065 VIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQL-KPKLVEALQG 4123

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4124 YRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4182

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4183 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4240

Query: 334  HVVALDSSGYV 344
            H V     G V
Sbjct: 4241 HCVCCTEDGEV 4251



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/228 (30%), Positives = 106/228 (46%), Gaps = 7/228 (3%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+   L  +  +FS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3036 GRHAMALTVDGKIFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAI 3094

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3095 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3153

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3154 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3212

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G V
Sbjct: 3213 DYFRLGHGTDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDTGQV 3258



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/221 (30%), Positives = 109/221 (49%), Gaps = 12/221 (5%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFT 186
             V++CG +  G LG G  ++  V   R     + +VV+   V +   HA  +   G++F+
Sbjct: 2992 KVYACGEATNGRLGLGI-SSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFS 3050

Query: 187  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
             G+      GH  +     +PRL+EALK    + +  G + +  +T  G ++T G   +G
Sbjct: 3051 WGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYG 3109

Query: 247  QLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGH 303
            +LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG 
Sbjct: 3110 RLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGR 3167

Query: 304  GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            G       P+ I+  R  G  V ++  G +  +AL  SG V
Sbjct: 3168 GGSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVV 3206



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 60/187 (32%), Positives = 96/187 (51%), Gaps = 20/187 (10%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           VVQ++ +E     + ++G+V+T   NS       DT      P+LV++L      ++ A 
Sbjct: 430 VVQIACAEKRFLILSRNGRVYTQAYNS-------DT----LGPQLVQSLASRNIVKIAAH 478

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V + G    G+LGHGDT+    PK I+ L  ++ G  VV IA G +
Sbjct: 479 SDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLISALSGKQAGKHVVHIACGST 538

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   D+  P  +     KG+ V+ VS  +GD   +A
Sbjct: 539 YSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGL--KGLKVIDVSCGSGDAQTLA 596

Query: 338 LDSSGYV 344
           +  +G V
Sbjct: 597 VTENGQV 603



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/190 (30%), Positives = 91/190 (47%), Gaps = 11/190 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2970 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSNYVV 3027

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G + + G    G+LGH   ++   P+ I  L +   +  IA 
Sbjct: 3028 KKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEAL-KTKRIRDIAC 3086

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3087 GSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3144

Query: 335  VVALDSSGYV 344
             +AL   G V
Sbjct: 3145 TLALTDEGLV 3154



 Score = 67.8 bits (164), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  I++S  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3084 IACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3142

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3143 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3201

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 3202 KSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDTGQVYA 3260

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3261 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3303



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 78/162 (48%), Gaps = 5/162 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2940 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 2998

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  + +A+T +G ++S+G G +  
Sbjct: 2999 ATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGK 3058

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            LGH  + +  +PR I+  + K I    ++ G  H  A+ SSG
Sbjct: 3059 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAAITSSG 3098



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 83/177 (46%), Gaps = 5/177 (2%)

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS--ASENHAAFV 178
           Y   + +   +++ G    G LGHG    Q +            V+ VS  + +     V
Sbjct: 539 YSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGL-KGLKVIDVSCGSGDAQTLAV 597

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
            ++GQV++ GD      G R  +     P+L+E L+ +   +V  G  F+  LT  G V+
Sbjct: 598 TENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVY 656

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
           T G   + +LGHG       PK +  L+    V+ +AAG ++ LA+T +  V+S+GS
Sbjct: 657 TWGKGDNQRLGHGTEEHVRYPKLLEGLKG-KKVIDVAAGSTHCLALTEDSEVHSWGS 712



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 53/169 (31%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       +V+V      + 
Sbjct: 589 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDIVKVRCGSQFSI 647

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV+T G   +   GH  T   +  P+L+E LKG     V AG      LT    
Sbjct: 648 ALTKDGQVYTWGKGDNQRLGH-GTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSE 706

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 707 VHSWGSNDQCQ--HFDTLRITKPEPAALPGL-DTKHIVGIACGPAQSFA 752



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4133 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4191

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4192 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4250

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    + ++A G ++ LA
Sbjct: 4251 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKINRVACGSAHTLA 4296



 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122  HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 3144 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 3202

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SG V+T G    F  GH  T+  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 3203 SGVVWTWGKGDYFRLGH-GTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAW 3261

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 3262 GDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 3305



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 67/137 (48%), Gaps = 3/137 (2%)

Query: 207  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            P   EAL  +   Q+  G      +T  G ++  G    G+LG G T    TP  +  ++
Sbjct: 3957 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQ 4016

Query: 267  EVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
             V    V + +G  + LA++  G VYS+G   +  LGHG +    +PR I++ R  GI V
Sbjct: 4017 HVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLR--GIEV 4074

Query: 326  VRVSAGDEHVVALDSSG 342
            V ++AG  H   + ++G
Sbjct: 4075 VDIAAGGAHSACITAAG 4091



 Score = 40.8 bits (94), Expect = 0.92,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 7/113 (6%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3933 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 3988

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G V
Sbjct: 3989 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4041


>gi|55727310|emb|CAH90411.1| hypothetical protein [Pongo abelii]
          Length = 975

 Score = 91.3 bits (225), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 110/227 (48%), Gaps = 7/227 (3%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGLNTKGQLGHVREGNKP---EQIGALADQHIIHVACGESHSLAL 99

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALASDGQFF 159

Query: 239 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGV 263



 Score = 90.9 bits (224), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 75/234 (32%), Positives = 113/234 (48%), Gaps = 7/234 (2%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALASDGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYV 344
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +
Sbjct: 265 TFGAGSYGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLI 316



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 65/194 (33%), Positives = 96/194 (49%), Gaps = 6/194 (3%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++ G +H L L S+   F+ G +  G LG G E     S  R+       + QV+A  
Sbjct: 140 LQVSCGNWHCLALASDGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG VF  G N++   G  D  +    P  V+ L+      ++ G   T  LT
Sbjct: 200 AHSFALSLSGAVFGWGMNNAGQLGLSD-EKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGNGVV 290
             G V T G+ ++GQLGH    D   P+ +  LE +GS V QIA G  + LA V  +G++
Sbjct: 259 KSGGVFTFGAGSYGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLI 316

Query: 291 YSFGSGSNFCLGHG 304
           Y+FG G+   LG G
Sbjct: 317 YAFGCGARGQLGTG 330



 Score = 75.1 bits (183), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 58/189 (30%), Positives = 101/189 (53%), Gaps = 10/189 (5%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N    +P  + AL    
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHVREGN----KPEQIGALADQH 85

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALASDGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 336 VALDSSGYV 344
            AL  SG V
Sbjct: 203 FALSLSGAV 211



 Score = 71.2 bits (173), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 51/165 (30%), Positives = 83/165 (50%), Gaps = 25/165 (15%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           T GQLGH    ++P        E++G+     ++ +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHVREGNKP--------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 299 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL S G
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALASDG 156


>gi|281361147|ref|NP_608388.2| HERC2 [Drosophila melanogaster]
 gi|91206848|sp|Q9VR91.3|HERC2_DROME RecName: Full=Probable E3 ubiquitin-protein ligase HERC2; AltName:
            Full=HECT domain and RCC1-like domain-containing protein
            2
 gi|272506184|gb|AAF50913.3| HERC2 [Drosophila melanogaster]
          Length = 4912

 Score = 91.3 bits (225), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 76/229 (33%), Positives = 108/229 (47%), Gaps = 9/229 (3%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAF 177
            G++   L  +  VFS G    G LGHG  TT  +   R +    A  +  V+   +H+A 
Sbjct: 3082 GKHALALTLDGKVFSWGEGEDGKLGHGNRTT--LDKPRLVEALRAKKIRDVACGSSHSAA 3139

Query: 178  VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRG 235
            +   G+++T G       GH D N    +P+LV AL G    QV  G     T  LT  G
Sbjct: 3140 ISSQGELYTWGLGEYGRLGHGD-NTTQLKPKLVTALAGRRVVQVACGSRDAQTLALTEDG 3198

Query: 236  HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
             V + G    G+LG G +    TP  I  L  +G VVQI  G  + LA+T  G V+++G 
Sbjct: 3199 AVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIG-VVQIECGAQFSLALTRAGEVWTWGK 3257

Query: 296  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            G  + LGHG      +P+ I   R  G  V+ V+ G  H +A+  +G V
Sbjct: 3258 GDYYRLGHGGDQHVRKPQPIGGLR--GRRVIHVAVGALHCLAVTDAGQV 3304



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 74/238 (31%), Positives = 113/238 (47%), Gaps = 14/238 (5%)

Query: 114  MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VS 169
            + I  G     ++S +  V++CG    G LG G   T  V           +VV+   V 
Sbjct: 3022 IHIAGGSKSLFIVSQDGKVYACGEGTNGRLGLG--VTHNVPLPHQLPVLRQYVVKKVAVH 3079

Query: 170  ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFT 228
            +   HA  +   G+VF+ G+      GH   NR    +PRLVEAL+    + V  G + +
Sbjct: 3080 SGGKHALALTLDGKVFSWGEGEDGKLGH--GNRTTLDKPRLVEALRAKKIRDVACGSSHS 3137

Query: 229  GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG--PSYMLAVTG 286
              ++ +G ++T G   +G+LGHGD   +  PK +  L     VVQ+A G   +  LA+T 
Sbjct: 3138 AAISSQGELYTWGLGEYGRLGHGDNTTQLKPKLVTALAGR-RVVQVACGSRDAQTLALTE 3196

Query: 287  NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            +G V+S+G G    LG G       P  I+  R  GI VV++  G +  +AL  +G V
Sbjct: 3197 DGAVFSWGDGDFGKLGRGGSEGSDTPHEIE--RLSGIGVVQIECGAQFSLALTRAGEV 3252



 Score = 78.2 bits (191), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 57/181 (31%), Positives = 88/181 (48%), Gaps = 6/181 (3%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAG 224
            V V++   H   +   G+V+  G+      GH   NR  + RP+LVE L G+    +  G
Sbjct: 4139 VAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH--GNRMSYDRPKLVEHLNGMSVADIACG 4196

Query: 225  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLA 283
               +  +T  GHV T G   +G+LGHGD+ D+  PK +  L    ++ +   +G +  L 
Sbjct: 4197 SAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLC 4256

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I++    G+ VV+V  G +  VAL  SG 
Sbjct: 4257 ITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESL--AGLGVVKVECGSQFSVALTKSGA 4314

Query: 344  V 344
            V
Sbjct: 4315 V 4315



 Score = 68.9 bits (167), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 51/163 (31%), Positives = 86/163 (52%), Gaps = 8/163 (4%)

Query: 184 VFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            ++ G       GH DT+ R +  P  + AL+    + V  G +++  +T  G++ T G 
Sbjct: 637 AYSWGTGEDHRLGHGDTHARAV--PTKIAALEQHCVQSVYCGCSYSAAITCGGNLLTWGR 694

Query: 243 NTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 301
            T+ +LGHG++ DR  P  +  L +   V V + +G ++ LA+T  G+V+++G G    L
Sbjct: 695 GTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKL 754

Query: 302 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G+G  +  LQP  +++  R    V RV AG +  VAL S G +
Sbjct: 755 GNGNCNGSLQPILVESLPR----VQRVFAGSQFSVALSSEGQL 793



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 73/287 (25%), Positives = 113/287 (39%), Gaps = 66/287 (22%)

Query: 113  NMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQV 168
             + + +G  H L L +   V++ G    G LGHG      +S+ R   +   +   V  +
Sbjct: 4138 KVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNR----MSYDRPKLVEHLNGMSVADI 4193

Query: 169  SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG------------- 215
            +    H+A +  SG V T G       GH D+   + RP+LVEAL G             
Sbjct: 4194 ACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQL-RPKLVEALLGYRAIDIACGSGDA 4252

Query: 216  -------------------------------VPCK----------QVTAGLNFTGFLTIR 234
                                           +P K          +V  G  F+  LT  
Sbjct: 4253 QTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKS 4312

Query: 235  GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
            G V+T G     +LGHG       PK +A L+    ++ IA G  + +A + +G VY++G
Sbjct: 4313 GAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQG-KKIISIATGSLHCVACSDSGEVYTWG 4371

Query: 295  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
                  LG G      +PR +     +G H+V+V+ G  H +AL +S
Sbjct: 4372 DNDEGQLGDGTVTAIQRPRLVAAL--QGKHIVKVTCGSAHTLALSTS 4416



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 97/225 (43%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            +  G  H+  IS+   +++ G    G LGHG  TTQ +    +   +   VVQV+     
Sbjct: 3130 VACGSSHSAAISSQGELYTWGLGEYGRLGHGDNTTQ-LKPKLVTALAGRRVVQVACGSRD 3188

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    + + G VF+ GD      G R  +     P  +E L G+   Q+  G  F+  LT
Sbjct: 3189 AQTLALTEDGAVFSWGDGDFGKLG-RGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALT 3247

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG       P+ I  L     V+ +A G  + LAVT  G VY+
Sbjct: 3248 RAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGR-RVIHVAVGALHCLAVTDAGQVYA 3306

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G G      +P  +       + V RV+ G  H +A
Sbjct: 3307 WGDNDHGQQGSGNTFVNKKPALVIGL--DAVFVNRVACGSSHSIA 3349



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 57/117 (48%), Gaps = 3/117 (2%)

Query: 230 FLTIRGH--VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           FL I  +   ++ G+    +LGHGDT  R  P  IA LE+   V  +  G SY  A+T  
Sbjct: 628 FLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQ-HCVQSVYCGCSYSAAITCG 686

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G + ++G G+   LGHG   D   P  +       +  V + +GD H +AL S G V
Sbjct: 687 GNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLV 743


>gi|380019055|ref|XP_003693433.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Apis florea]
          Length = 4812

 Score = 91.3 bits (225), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 70/220 (31%), Positives = 110/220 (50%), Gaps = 11/220 (5%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE--NHAAFVLQSGQVFTC 187
             +++CG    G LG G ++  C     I F S   + +VS      HA  + Q G+VF+ 
Sbjct: 2987 KLYACGEGTNGRLGLGDDSNVCEP-KPIPFLSQYVIKKVSVHSGGKHALALTQDGKVFSW 3045

Query: 188  GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
            G+      GH ++   + +PRL+E+LK    + +  G   +  +T  G ++T G   +G+
Sbjct: 3046 GEGEDGKLGHGNSIS-LDKPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGR 3104

Query: 248  LGHGDTLDRPTPKSIAPLEEVGS-VVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGHG 304
            LGHGDT  +  PK +  L  VG  ++QIA G   +  +A+T +G+VYS+G G    LG G
Sbjct: 3105 LGHGDTATQSKPKLVQSL--VGQRIIQIACGSRDAQTMALTADGLVYSWGDGDFGKLGRG 3162

Query: 305  EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
                   P  I   R  G+ VV++  G +  +AL   G V
Sbjct: 3163 GSDGCYTPLLID--RLNGLGVVQIECGAQFSLALTKYGEV 3200



 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/231 (31%), Positives = 109/231 (47%), Gaps = 13/231 (5%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSASENHA 175
            G++   L  +  VFS G    G LGHG      +S  +   I    +  +  ++    H+
Sbjct: 3030 GKHALALTQDGKVFSWGEGEDGKLGHG----NSISLDKPRLIESLKSKRIRDIACGSGHS 3085

Query: 176  AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTI 233
            A +  SG+++T G       GH DT     +P+LV++L G    Q+  G     T  LT 
Sbjct: 3086 AAITSSGELYTWGLGEYGRLGHGDTATQ-SKPKLVQSLVGQRIIQIACGSRDAQTMALTA 3144

Query: 234  RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
             G V++ G    G+LG G +    TP  I  L  +G VVQI  G  + LA+T  G V+++
Sbjct: 3145 DGLVYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLG-VVQIECGAQFSLALTKYGEVWTW 3203

Query: 294  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            G G  F LGHG  H   +P  ++  R  G  V+ V+ G  H +A+   G V
Sbjct: 3204 GKGDYFRLGHGNDHHVRKPTLVEGLR--GKKVIHVAVGALHCLAVTDIGQV 3252



 Score = 80.9 bits (198), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 72/236 (30%), Positives = 112/236 (47%), Gaps = 17/236 (7%)

Query: 118  TGRYHTL--LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV----VQVSAS 171
            TG   TL  + ++  V++ G    G LG G   +  V        S  HV    V V++ 
Sbjct: 3992 TGGEQTLFAVTADGKVYATGYGAVGRLGIGGTDSVMVPTL---LESIQHVFVKKVAVNSG 4048

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFTGF 230
              H   +   G V++ G+      GH   NR  + RP+L+E L G     +  G + +  
Sbjct: 4049 GKHCLALSSEGHVYSWGEGDDGKLGH--GNRLSYDRPKLIEELLGTEIVDIACGGHHSAA 4106

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLAVTGNG 288
            +T  G ++T G   +G+LGHGD+ D+ TPK I  L++   V+ +A  +G +  L VT + 
Sbjct: 4107 ITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLIEALQDY-KVIDVACGSGDAQTLCVTDDD 4165

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             V+S+G G    LG G       P  I++    G+ VV+V  G +  VAL  SG +
Sbjct: 4166 NVWSWGDGDYGKLGRGGSDGCKIPMKIESL--AGLGVVKVECGSQFSVALTRSGAI 4219



 Score = 78.6 bits (192), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 68/255 (26%), Positives = 115/255 (45%), Gaps = 20/255 (7%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSF 154
             L+S++H           + + +G  H L +S+   V+S G    G LGHG      +S+
Sbjct: 4031 LLESIQH------VFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNR----LSY 4080

Query: 155  TR---INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE 211
             R   I       +V ++   +H+A +  +G ++T G       GH D+   +  P+L+E
Sbjct: 4081 DRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQL-TPKLIE 4139

Query: 212  ALKGVPCKQVTAGLNFTGFL--TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 269
            AL+      V  G      L  T   +V + G   +G+LG G +     P  I  L  +G
Sbjct: 4140 ALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLG 4199

Query: 270  SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
             VV++  G  + +A+T +G +Y++G G    LGHG      +PR +     +G  ++ ++
Sbjct: 4200 -VVKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGTDDHVRRPRKVAAL--QGKKIISIA 4256

Query: 330  AGDEHVVALDSSGYV 344
             G  H VA    G V
Sbjct: 4257 TGSLHCVACTDKGEV 4271



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 111/234 (47%), Gaps = 27/234 (11%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 169
           + G ++  L  ++SV+S G+   G LGHG       P+  + +    I F        ++
Sbjct: 512 SDGTHYLALTQDNSVYSWGNGDGGRLGHGDRAWYDEPKLIEALVEKNITF--------IA 563

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG-----VPCKQVTAG 224
               ++A +  +G+++T G  +    GH +++  +  P LV AL G     V C    +G
Sbjct: 564 CGSTYSAALSSNGELYTWGRGNYGRLGHGNSDN-VMIPTLVTALNGHMVVYVACG---SG 619

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
            + T  +T  G V + G   +G+LG G      TPK +  L ++ +V ++  G  +  A+
Sbjct: 620 DSQTLCVTASGIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDI-NVAKVYCGGQFSAAL 678

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           T  G VY++G G  + LGHG +     P+ I   + K   V  +  G+ HV+AL
Sbjct: 679 TAYGEVYTWGKGEAYRLGHGNEDHVRYPKIIDILKTK--KVKELCVGNLHVLAL 730



 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/227 (25%), Positives = 100/227 (44%), Gaps = 8/227 (3%)

Query: 114  MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            + I  G +H+  I+++  +++ G    G LGHG    Q ++   I       V+ V+   
Sbjct: 4095 VDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQ-LTPKLIEALQDYKVIDVACGS 4153

Query: 173  NHAAF--VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
              A    V     V++ GD      G R  +     P  +E+L G+   +V  G  F+  
Sbjct: 4154 GDAQTLCVTDDDNVWSWGDGDYGKLG-RGGSDGCKIPMKIESLAGLGVVKVECGSQFSVA 4212

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            LT  G ++T G   + +LGHG       P+ +A L+    ++ IA G  + +A T  G V
Sbjct: 4213 LTRSGAIYTWGKGDYHRLGHGTDDHVRRPRKVAALQG-KKIISIATGSLHCVACTDKGEV 4271

Query: 291  YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +++G      LG G      +PR +     +G  + RV+ G  H +A
Sbjct: 4272 FTWGDNDEGQLGDGTTSALQRPRLVHAL--QGKKITRVACGSAHTLA 4316



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 69/140 (49%), Gaps = 3/140 (2%)

Query: 204  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
            I  P   E L  +    +  G      ++  G ++ CG  T+G+LG GD  +   PK I 
Sbjct: 2955 IKLPVYSEVLSKLKPVHIAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDSNVCEPKPIP 3014

Query: 264  PLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
             L + V   V + +G  + LA+T +G V+S+G G +  LGHG      +PR I++ + K 
Sbjct: 3015 FLSQYVIKKVSVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNSISLDKPRLIESLKSKR 3074

Query: 323  IHVVRVSAGDEHVVALDSSG 342
            I    ++ G  H  A+ SSG
Sbjct: 3075 IR--DIACGSGHSAAITSSG 3092



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 60/225 (26%), Positives = 97/225 (43%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS--ASE 172
            I  G  H+  I++S  +++ G    G LGHG   TQ      +       ++Q++  + +
Sbjct: 3078 IACGSGHSAAITSSGELYTWGLGEYGRLGHGDTATQSKP-KLVQSLVGQRIIQIACGSRD 3136

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
                 +   G V++ GD      G R  +   + P L++ L G+   Q+  G  F+  LT
Sbjct: 3137 AQTMALTADGLVYSWGDGDFGKLG-RGGSDGCYTPLLIDRLNGLGVVQIECGAQFSLALT 3195

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG+      P  +  L     V+ +A G  + LAVT  G VY+
Sbjct: 3196 KYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRG-KKVIHVAVGALHCLAVTDIGQVYA 3254

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +         V RVS G  H +A
Sbjct: 3255 WGDNDHGQQGNGTTIVNKKPSLVHEL--DDARVNRVSCGSSHSIA 3297



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 68/139 (48%), Gaps = 3/139 (2%)

Query: 207  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            P L E+L  +   Q+T G      +T  G V+  G    G+LG G T     P  +  ++
Sbjct: 3977 PVLCESLSALRPVQLTGGEQTLFAVTADGKVYATGYGAVGRLGIGGTDSVMVPTLLESIQ 4036

Query: 267  EV-GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
             V    V + +G  + LA++  G VYS+G G +  LGHG +    +P+ I+     G  +
Sbjct: 4037 HVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLSYDRPKLIEELL--GTEI 4094

Query: 326  VRVSAGDEHVVALDSSGYV 344
            V ++ G  H  A+ S+G++
Sbjct: 4095 VDIACGGHHSAAITSAGWL 4113



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 57/114 (50%), Gaps = 1/114 (0%)

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           LT    V++ G+   G+LGHGD      PK I  L E  ++  IA G +Y  A++ NG +
Sbjct: 520 LTQDNSVYSWGNGDGGRLGHGDRAWYDEPKLIEALVE-KNITFIACGSTYSAALSSNGEL 578

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           Y++G G+   LGHG   + + P  +       +  V   +GD   + + +SG V
Sbjct: 579 YTWGRGNYGRLGHGNSDNVMIPTLVTALNGHMVVYVACGSGDSQTLCVTASGIV 632



 Score = 45.8 bits (107), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 7/113 (6%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  P   +S++ L  V    Q+  G   + AVT +G VY
Sbjct: 3953 GAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPV----QLTGGEQTLFAVTADGKVY 4008

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            + G G+   LG G     + P  +++ +   +  V V++G +H +AL S G+V
Sbjct: 4009 ATGYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHV 4061



 Score = 44.3 bits (103), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 51/110 (46%), Gaps = 5/110 (4%)

Query: 237  VHTCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
            V+  G N   QLG   G  +  P    +  L ++  V  IA G   +  V+  G +Y+ G
Sbjct: 2936 VYVWGLNDKDQLGGLKGSKIKLPVYSEV--LSKLKPV-HIAGGSKTLFVVSQEGKLYACG 2992

Query: 295  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             G+N  LG G+  +  +P+ I    +  I  V V +G +H +AL   G V
Sbjct: 2993 EGTNGRLGLGDDSNVCEPKPIPFLSQYVIKKVSVHSGGKHALALTQDGKV 3042



 Score = 40.0 bits (92), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 75/172 (43%), Gaps = 14/172 (8%)

Query: 118 TGRYHTLLISNSS-VFSCGSSLCGVLGHG----PETTQCVS-FTRINFPSAAHVVQVSAS 171
           +G   TL ++ S  VFS G    G LG G     +T + V     IN      V +V   
Sbjct: 618 SGDSQTLCVTASGIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDIN------VAKVYCG 671

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
              +A +   G+V+T G   ++  GH + +  +  P++++ LK    K++  G      L
Sbjct: 672 GQFSAALTAYGEVYTWGKGEAYRLGHGNEDH-VRYPKIIDILKTKKVKELCVGNLHVLAL 730

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           T    ++  G N +GQ+        P P ++ P     +V+ +A GP+   A
Sbjct: 731 TEDQLIYGWGRNDYGQIDPALGTVVPEP-TLCPTLSGKNVIGLACGPTQSFA 781


>gi|326518338|dbj|BAJ88198.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326519062|dbj|BAJ96530.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 441

 Score = 91.3 bits (225), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 115/228 (50%), Gaps = 5/228 (2%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           ++ G  H++ L++ + + + G    G LGHG    + V      F +      +  +++ 
Sbjct: 19  VSAGASHSVALLAGNVLCTWGRGEDGQLGHGDAEDRLVPTVISGFDAPGITSVICGADHT 78

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
            A+     QV++ G       GH ++   +F P+ V+AL+G+  KQ+  G +    +T+ 
Sbjct: 79  TAYSEDEHQVYSWGWGDFGRLGHGNSTD-VFTPQPVKALQGIKIKQLACGDSHCLAVTMA 137

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G V + G N +GQLG G T D   P++I   E + SV  IAAG  +  AVT +G +Y +G
Sbjct: 138 GEVLSWGRNQNGQLGLGTTEDSLLPQTIQAFEGI-SVKMIAAGAEHTAAVTEDGDIYGWG 196

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            G    LG G+++D   P  + +   +G  +V V+ G  H + + SSG
Sbjct: 197 WGRYGNLGLGDRNDRFVPEKVSSV--EGDKMVLVACGWRHTITVSSSG 242



 Score = 77.4 bits (189), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 92/208 (44%), Gaps = 4/208 (1%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G  HT  ++ +  ++  G    G LG G    + V   +++      +V V+    H
Sbjct: 176 IAAGAEHTAAVTEDGDIYGWGWGRYGNLGLGDRNDRFVP-EKVSSVEGDKMVLVACGWRH 234

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V  SG ++T G +     GH D    +  P  VEALK     Q++ G   T  LT  
Sbjct: 235 TITVSSSGSLYTYGWSKYGQLGHGDFEDHLV-PHKVEALKDSSTSQISGGWRHTMALTSD 293

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G ++  G N  GQ+G GD  D  +P  +   EE   V Q+A G  + LA T    V+++G
Sbjct: 294 GKLYGWGWNKFGQVGAGDNADHCSPAQVNFPEEQ-KVAQVACGWRHTLAFTEKKNVFAWG 352

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKG 322
            G++  LGHGE  D   P  I      G
Sbjct: 353 RGTSGQLGHGEIVDRNTPVIIDALSPDG 380



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 59/181 (32%), Positives = 87/181 (48%), Gaps = 5/181 (2%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           VV VSA  +H+  +L    + T G       GH D    +  P ++          V  G
Sbjct: 16  VVLVSAGASHSVALLAGNVLCTWGRGEDGQLGHGDAEDRLV-PTVISGFDAPGITSVICG 74

Query: 225 LNFTGFLTIRGH-VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            + T   +   H V++ G    G+LGHG++ D  TP+ +  L+ +  + Q+A G S+ LA
Sbjct: 75  ADHTTAYSEDEHQVYSWGWGDFGRLGHGNSTDVFTPQPVKALQGI-KIKQLACGDSHCLA 133

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           VT  G V S+G   N  LG G   D L P+ IQ F  +GI V  ++AG EH  A+   G 
Sbjct: 134 VTMAGEVLSWGRNQNGQLGLGTTEDSLLPQTIQAF--EGISVKMIAAGAEHTAAVTEDGD 191

Query: 344 V 344
           +
Sbjct: 192 I 192



 Score = 40.0 bits (92), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 2/68 (2%)

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
           +VV ++AG S+ +A+    V+ ++G G +  LGHG+  D L P  I  F   GI    V 
Sbjct: 15  AVVLVSAGASHSVALLAGNVLCTWGRGEDGQLGHGDAEDRLVPTVISGFDAPGI--TSVI 72

Query: 330 AGDEHVVA 337
            G +H  A
Sbjct: 73  CGADHTTA 80


>gi|383280368|pdb|4D9S|A Chain A, Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv
           Resistance Locus 8)
 gi|383280369|pdb|4D9S|B Chain B, Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv
           Resistance Locus 8)
          Length = 406

 Score = 91.3 bits (225), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 71/229 (31%), Positives = 115/229 (50%), Gaps = 7/229 (3%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I+ G  H++ L+S   V S G    G LGHG +     S T+++      +V V+   +H
Sbjct: 21  ISAGASHSVALLSGDIVCSWGRGEDGQLGHG-DAEDRPSPTQLSALDGHQIVSVTCGADH 79

Query: 175 AAFVLQSG-QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
                QSG +V++ G       GH +++  +F P  ++AL G+  KQ+  G +    +T+
Sbjct: 80  TVAYSQSGMEVYSWGWGDFGRLGHGNSSD-LFTPLPIKALHGIRIKQIACGDSHCLAVTM 138

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V + G N +GQLG GDT D   P+ I   E +  +  +AAG  +  AVT +G +Y +
Sbjct: 139 EGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGI-RIKMVAAGAEHTAAVTEDGDLYGW 197

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           G G    LG G++ D L P  + +    G  +  V+ G  H +++  SG
Sbjct: 198 GWGRYGNLGLGDRTDRLVPERVTS--TGGEKMSMVACGWRHTISVSYSG 244



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 65/180 (36%), Positives = 90/180 (50%), Gaps = 7/180 (3%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTA 223
           V+ +SA  +H+  +L    V + G       GH D  +RP   P  + AL G     VT 
Sbjct: 18  VLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRP--SPTQLSALDGHQIVSVTC 75

Query: 224 GLNFTGFLTIRG-HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
           G + T   +  G  V++ G    G+LGHG++ D  TP  I  L  +  + QIA G S+ L
Sbjct: 76  GADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGI-RIKQIACGDSHCL 134

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           AVT  G V S+G   N  LG G+  D L P+ IQ F  +GI +  V+AG EH  A+   G
Sbjct: 135 AVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAF--EGIRIKMVAAGAEHTAAVTEDG 192



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 96/209 (45%), Gaps = 6/209 (2%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HT  ++ +  ++  G    G LG G  T + V   R+       +  V+    H
Sbjct: 178 VAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVP-ERVTSTGGEKMSMVACGWRH 236

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V  SG ++T G +     GH D    +  P  +EAL      Q++ G   T  LT  
Sbjct: 237 TISVSYSGALYTYGWSKYGQLGHGDLEDHLI-PHKLEALSNSFISQISGGWRHTMALTSD 295

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
           G ++  G N  GQ+G G+ LD+ +P  +  P ++   VVQ++ G  + LAVT    V+++
Sbjct: 296 GKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQ--KVVQVSCGWRHTLAVTERNNVFAW 353

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           G G+N  LG GE  D   P+ I+     G
Sbjct: 354 GRGTNGQLGIGESVDRNFPKIIEALSVDG 382



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 76/162 (46%), Gaps = 9/162 (5%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HT+ +S S ++++ G S  G LGHG      +   ++   S + + Q+S    H
Sbjct: 230 VACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPH-KLEALSNSFISQISGGWRH 288

Query: 175 AAFVLQSGQVFTCGDNSSFCCG---HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
              +   G+++  G N     G   + D   P+ + R  +  K V   QV+ G   T  +
Sbjct: 289 TMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPV-QVRFPDDQKVV---QVSCGWRHTLAV 344

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           T R +V   G  T+GQLG G+++DR  PK I  L   G+  Q
Sbjct: 345 TERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALSVDGASGQ 386


>gi|302753472|ref|XP_002960160.1| hypothetical protein SELMODRAFT_73640 [Selaginella moellendorffii]
 gi|300171099|gb|EFJ37699.1| hypothetical protein SELMODRAFT_73640 [Selaginella moellendorffii]
          Length = 435

 Score = 91.3 bits (225), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 68/214 (31%), Positives = 105/214 (49%), Gaps = 8/214 (3%)

Query: 113 NMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            M    G ++  L    +V++ G    G LGHG    + +    +  P    +V VSA  
Sbjct: 138 QMASAGGLHNIALTEVGNVYTWGYGAFGALGHGSYERELLP-RLLEGPWKDRIVHVSAGG 196

Query: 173 NHAAFVLQSGQVFTCG-DNSSFCCGHRDTN----RPIFRPRLVEALKGVPCKQVTAGLNF 227
           +H A V +SG+++T G D      GH + +      + RP  V+AL  VP   V  G  F
Sbjct: 197 SHTAAVTESGELYTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQALD-VPIALVYCGGFF 255

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           T  LT  G + + G N + +LGHG   +   PK +A LE+V ++VQ+A G  +  A+T +
Sbjct: 256 TMALTKSGQLWSWGGNANHELGHGTRANNWKPKVVAALEDV-TLVQVACGGFHAAALTQD 314

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 321
           G V ++G G N  LGHG   +  +P  ++    K
Sbjct: 315 GKVITWGYGGNGQLGHGTLENGKEPAIVEAMADK 348



 Score = 45.8 bits (107), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 57/132 (43%), Gaps = 3/132 (2%)

Query: 119 GRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 177
           G + T+ ++ S  ++S G +    LGHG                   +VQV+    HAA 
Sbjct: 252 GGFFTMALTKSGQLWSWGGNANHELGHGTRANNWKPKVVAALEDVT-LVQVACGGFHAAA 310

Query: 178 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
           + Q G+V T G   +   GH  T      P +VEA+    C  +  G  +T  +T  G +
Sbjct: 311 LTQDGKVITWGYGGNGQLGH-GTLENGKEPAIVEAMADKTCTYIACGPAWTAAITENGDL 369

Query: 238 HTCGSNTHGQLG 249
           +T G N   QLG
Sbjct: 370 YTWGKNRDYQLG 381



 Score = 44.7 bits (104), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 57/122 (46%), Gaps = 6/122 (4%)

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           VT GL F   L     V   G    G+LG     ++  P  + P   +  V   +AG  +
Sbjct: 91  VTCGL-FHSVLFAEQDVFVWGKGDGGRLGIDTEFNQYKP-YVNP--RIKRVQMASAGGLH 146

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            +A+T  G VY++G G+   LGHG    EL PR ++   +    +V VSAG  H  A+  
Sbjct: 147 NIALTEVGNVYTWGYGAFGALGHGSYERELLPRLLEGPWKD--RIVHVSAGGSHTAAVTE 204

Query: 341 SG 342
           SG
Sbjct: 205 SG 206


>gi|356576039|ref|XP_003556142.1| PREDICTED: uncharacterized protein LOC100811999 [Glycine max]
          Length = 1098

 Score = 91.3 bits (225), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 59/177 (33%), Positives = 93/177 (52%), Gaps = 7/177 (3%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V+Q++    HAA V + G++FT G+ S    GH    + + +PRLVEA+       V  G
Sbjct: 281 VLQIACGVKHAALVTRQGELFTWGEESGGRLGH-GVGKNVVQPRLVEAMASTTVDFVACG 339

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
              T  +T+ G ++T G  TH  G LGHG  +    PK IA PLE +  V  +  GP + 
Sbjct: 340 EFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRIAGPLEGL-QVALVTCGPWHT 398

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             +T  G +++FG G+   LGHG++ +   PR +++    G+  + V+ G  H  A+
Sbjct: 399 ALITSTGQLFTFGDGTFGVLGHGDRENVSYPREVESL--SGLRTIAVACGVWHTAAI 453



 Score = 80.9 bits (198), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 71/243 (29%), Positives = 113/243 (46%), Gaps = 19/243 (7%)

Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           +T G +HT LI S   +F+ G    GVLGHG    + VS+ R +   S    + V+    
Sbjct: 391 VTCGPWHTALITSTGQLFTFGDGTFGVLGHGDR--ENVSYPREVESLSGLRTIAVACGVW 448

Query: 174 HAAFVLQ-----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           H A +++           SG++FT GD      GH D +  +  P  V +L      ++ 
Sbjct: 449 HTAAIIEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKDARL-EPTCVPSLIEDNFHRIA 507

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
            G + T  LT  G V T GS  +GQLG+  + D   P  +       SV +IA G  ++ 
Sbjct: 508 CGHSLTVGLTTSGRVFTMGSTVYGQLGNPQS-DGKLPCLVEDKFAGESVEEIACGAYHVA 566

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            +T    V+++G G+N  LGHG+  D   P  ++  + +  HV  ++ G  +  A+    
Sbjct: 567 VLTSKNEVFTWGKGANGRLGHGDVEDRKSPTLVEALKDR--HVKYIACGSNYSSAICLHK 624

Query: 343 YVS 345
           +VS
Sbjct: 625 WVS 627



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 67/141 (47%), Gaps = 4/141 (2%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           I  PR +E+   +   Q+  G+     +T +G + T G  + G+LGHG   +   P+ + 
Sbjct: 267 ILLPRPLESNVVLDVLQIACGVKHAALVTRQGELFTWGEESGGRLGHGVGKNVVQPRLVE 326

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRK 321
            +    +V  +A G  +  AVT  G +Y++G G++    LGHG       P+ I     +
Sbjct: 327 AMAST-TVDFVACGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRI-AGPLE 384

Query: 322 GIHVVRVSAGDEHVVALDSSG 342
           G+ V  V+ G  H   + S+G
Sbjct: 385 GLQVALVTCGPWHTALITSTG 405


>gi|195345959|ref|XP_002039536.1| GM23027 [Drosophila sechellia]
 gi|194134762|gb|EDW56278.1| GM23027 [Drosophila sechellia]
          Length = 3806

 Score = 91.3 bits (225), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 76/229 (33%), Positives = 108/229 (47%), Gaps = 9/229 (3%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAF 177
            G++   L  +  VFS G    G LGHG  TT  +   R +    A  +  V+   +H+A 
Sbjct: 2737 GKHALALTLDGKVFSWGEGEDGKLGHGNRTT--LDKPRLVEALRAKKIRDVACGSSHSAA 2794

Query: 178  VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRG 235
            +   G+++T G       GH D N    +P+LV AL G    QV  G     T  LT  G
Sbjct: 2795 ISSQGELYTWGLGEYGRLGHGD-NTTQLKPKLVTALAGRRVVQVACGSRDAQTLALTEDG 2853

Query: 236  HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
             V + G    G+LG G +    TP  I  L  +G VVQI  G  + LA+T  G V+++G 
Sbjct: 2854 AVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIG-VVQIECGAQFSLALTRAGEVWTWGK 2912

Query: 296  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            G  + LGHG      +P+ I   R  G  V+ V+ G  H +A+  +G V
Sbjct: 2913 GDYYRLGHGGDQHVRKPQPIGGLR--GRRVIHVAVGALHCLAVTDAGQV 2959



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 111/239 (46%), Gaps = 16/239 (6%)

Query: 114  MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP----SAAHVVQV 168
            + I  G     ++S +  V++CG    G LG G   T  V       P         V V
Sbjct: 2677 IHIAGGSKSLFIVSQDGKVYACGEGTNGRLGLG--VTHNVPLPH-QLPVLHQYVVKKVAV 2733

Query: 169  SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNF 227
             +   HA  +   G+VF+ G+      GH   NR    +PRLVEAL+    + V  G + 
Sbjct: 2734 HSGGKHALALTLDGKVFSWGEGEDGKLGH--GNRTTLDKPRLVEALRAKKIRDVACGSSH 2791

Query: 228  TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG--PSYMLAVT 285
            +  ++ +G ++T G   +G+LGHGD   +  PK +  L     VVQ+A G   +  LA+T
Sbjct: 2792 SAAISSQGELYTWGLGEYGRLGHGDNTTQLKPKLVTALAGR-RVVQVACGSRDAQTLALT 2850

Query: 286  GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             +G V+S+G G    LG G       P  I+  R  GI VV++  G +  +AL  +G V
Sbjct: 2851 EDGAVFSWGDGDFGKLGRGGSEGSDTPHEIE--RLSGIGVVQIECGAQFSLALTRAGEV 2907



 Score = 68.9 bits (167), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 50/162 (30%), Positives = 84/162 (51%), Gaps = 6/162 (3%)

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            ++ G       GH DT+     P  + AL+    + V  G +++  +T  G++ T G  
Sbjct: 291 AYSWGTGEDHRLGHGDTHARAV-PTKIAALEQHCVQSVYCGCSYSAAITCGGNLLTWGRG 349

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
           T+ +LGHG++ DR  P  +  L +   V V + +G ++ LA+T  G+V+++G G    LG
Sbjct: 350 TYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLG 409

Query: 303 HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           +G  +  LQP  +++  R    V RV AG +  VAL S G +
Sbjct: 410 NGNCNGSLQPILVESLPR----VQRVFAGSQFSVALSSEGQL 447



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 97/225 (43%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            +  G  H+  IS+   +++ G    G LGHG  TTQ +    +   +   VVQV+     
Sbjct: 2785 VACGSSHSAAISSQGELYTWGLGEYGRLGHGDNTTQ-LKPKLVTALAGRRVVQVACGSRD 2843

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    + + G VF+ GD      G R  +     P  +E L G+   Q+  G  F+  LT
Sbjct: 2844 AQTLALTEDGAVFSWGDGDFGKLG-RGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALT 2902

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG       P+ I  L     V+ +A G  + LAVT  G VY+
Sbjct: 2903 RAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGR-RVIHVAVGALHCLAVTDAGQVYA 2961

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G G      +P  +       + V RV+ G  H +A
Sbjct: 2962 WGDNDHGQQGSGNTFVNKKPALVIGL--DAVFVNRVACGSSHSIA 3004



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 57/117 (48%), Gaps = 3/117 (2%)

Query: 230 FLTIRGH--VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           FL I  +   ++ G+    +LGHGDT  R  P  IA LE+   V  +  G SY  A+T  
Sbjct: 282 FLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQ-HCVQSVYCGCSYSAAITCG 340

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G + ++G G+   LGHG   D   P  +       +  V + +GD H +AL S G V
Sbjct: 341 GNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLV 397


>gi|444915391|ref|ZP_21235524.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444713468|gb|ELW54366.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 743

 Score = 91.3 bits (225), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 75/235 (31%), Positives = 111/235 (47%), Gaps = 16/235 (6%)

Query: 111 AGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G M +T G  H+L + S+ +V++ GS+  G  G G    +    + +        V V+
Sbjct: 346 SGGMAVTAGSSHSLAVGSDGTVWAWGSNFSGERGEGTTNNRA---SPVQVQGLGGGVAVA 402

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
           A  NH+      G V+  G N S   G   T R    P  V+ L GV    V AG + + 
Sbjct: 403 AGFNHSLAARSDGSVWAWGSNDSGQLGD-GTTRNSTSPVQVQGLSGVVA--VAAGFDHSL 459

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
            L   G V   GSN +GQLG G T +R     + P++ +  VV +AAG ++ LAV  +G 
Sbjct: 460 ALRSDGSVWAWGSNAYGQLGEGTTTNR-----LVPVQVLSGVVAVAAGSNHSLAVRSDGT 514

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           V+++GS     LG G   + L P  +Q        V  V+AG  H +A+ S G V
Sbjct: 515 VWTWGSNLYGQLGDGTTSNRLVPVQVQGLS----GVAAVAAGSFHSLAVHSDGSV 565



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 78/240 (32%), Positives = 114/240 (47%), Gaps = 18/240 (7%)

Query: 107 VETSAGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV 165
           V+   G + +  G  H+L   S+ SV++ GS+  G LG G   T   S + +     + V
Sbjct: 392 VQGLGGGVAVAAGFNHSLAARSDGSVWAWGSNDSGQLGDG---TTRNSTSPVQVQGLSGV 448

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V V+A  +H+  +   G V+  G N+    G    TNR +  P  V+ L GV    V AG
Sbjct: 449 VAVAAGFDHSLALRSDGSVWAWGSNAYGQLGEGTTTNRLV--P--VQVLSGVVA--VAAG 502

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
            N +  +   G V T GSN +GQLG G T +R  P  +  L     V  +AAG  + LAV
Sbjct: 503 SNHSLAVRSDGTVWTWGSNLYGQLGDGTTSNRLVPVQVQGLS---GVAAVAAGSFHSLAV 559

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             +G V+++GS S+  LG G   + L P  +          V V+AG  H + + S G V
Sbjct: 560 HSDGSVWAWGSNSSGELGDGTTSNRLVPGRVPGLSGG----VAVAAGGFHSLVVRSDGTV 615



 Score = 72.0 bits (175), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 78/243 (32%), Positives = 113/243 (46%), Gaps = 22/243 (9%)

Query: 107 VETSAGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV 165
           V+  +G + +  G  H+L + S+ +V++ GS+L G LG G  + + V    +     + V
Sbjct: 490 VQVLSGVVAVAAGSNHSLAVRSDGTVWTWGSNLYGQLGDGTTSNRLVP---VQVQGLSGV 546

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
             V+A   H+  V   G V+  G NSS   G   T+  +  P  V  L G     V AG 
Sbjct: 547 AAVAAGSFHSLAVHSDGSVWAWGSNSSGELGDGTTSNRLV-PGRVPGLSG--GVAVAAG- 602

Query: 226 NFTGF--LTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
              GF  L +R  G V T GSN+ G+LG G T  R  P  +  L     VV + AG S+ 
Sbjct: 603 ---GFHSLVVRSDGTVWTWGSNSFGELGDGTTTSRSVPVQVQGLS---GVVAVDAGNSHS 656

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           LAV  +G V+++G  S   LG G       P  +Q     G  VV ++ G  H + + S 
Sbjct: 657 LAVRSDGTVWTWGYNSYGQLGDGTTTRRSVP--VQVPGLSG--VVAMATGALHPLVVRSD 712

Query: 342 GYV 344
           G V
Sbjct: 713 GTV 715



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 75/248 (30%), Positives = 116/248 (46%), Gaps = 15/248 (6%)

Query: 99  SVEHSSDI-VETSAGNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTR 156
           +  HS+ + V   +G + +  G  H+L +  + +V++ GS+  G LG G   T  +  T 
Sbjct: 83  TTNHSAPVQVPGLSGVVAVAAGSSHSLAVRHDGTVWAWGSNSDGQLGDG---TTTMRLTP 139

Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
           +     + VV V+A  +++  V   G V+  G N S   G   T+  +  P  V  L GV
Sbjct: 140 VRVQGLSGVVSVAAGSSYSLAVRSDGTVWAWGSNFSGQLGDGTTSNRLV-PVQVPGLSGV 198

Query: 217 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
               V AG + +  +   G V   G+N+ GQLG G  ++R  P  +  L  V +V   AA
Sbjct: 199 --VSVAAGSSHSLAVLSDGSVWAWGANSSGQLGDGTKINRLVPVQVPGLSGVVAVAAGAA 256

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
              + LAV  +G V+++G+ S   LG G + D L P  +Q        VV    G  H +
Sbjct: 257 ---HSLAVRSDGTVWTWGANSFGQLGDGTKSDRLVPVRVQGLS----GVVASDVGSYHSL 309

Query: 337 ALDSSGYV 344
           AL S G V
Sbjct: 310 ALRSDGSV 317



 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 77/238 (32%), Positives = 105/238 (44%), Gaps = 28/238 (11%)

Query: 114 MQITTGRYHTLLISNSSVFSCGSSLCGVL---GHGPETTQCVSFTRINFP--SAAHVVQV 168
           MQ   GR+ + L+             GVL   G G  T +    T    P   A    ++
Sbjct: 1   MQGNAGRWMSRLLG---------VWIGVLMGVGCGLPTDESAEQTSRGAPLRDAPSRARL 51

Query: 169 SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
           +A  +++  +   G V+  G N     G   T      P  V  L GV    V AG + +
Sbjct: 52  AAGSSYSLALRPDGTVWATGSNDLGQLGDGTTTNH-SAPVQVPGLSGVVA--VAAGSSHS 108

Query: 229 GFLTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
             L +R  G V   GSN+ GQLG G T  R TP  +  L     VV +AAG SY LAV  
Sbjct: 109 --LAVRHDGTVWAWGSNSDGQLGDGTTTMRLTPVRVQGLS---GVVSVAAGSSYSLAVRS 163

Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           +G V+++GS  +  LG G   + L P  +Q     G  VV V+AG  H +A+ S G V
Sbjct: 164 DGTVWAWGSNFSGQLGDGTTSNRLVP--VQVPGLSG--VVSVAAGSSHSLAVLSDGSV 217



 Score = 64.7 bits (156), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 70/235 (29%), Positives = 106/235 (45%), Gaps = 14/235 (5%)

Query: 111 AGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G + +  G  H+L ++S+ SV++ G++  G LG G +  + V    +  P  + VV V+
Sbjct: 196 SGVVSVAAGSSHSLAVLSDGSVWAWGANSSGQLGDGTKINRLVP---VQVPGLSGVVAVA 252

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
           A   H+  V   G V+T G NS    G   T      P  V+ L GV    V  G   + 
Sbjct: 253 AGAAHSLAVRSDGTVWTWGANSFGQLGD-GTKSDRLVPVRVQGLSGVVASDV--GSYHSL 309

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
            L   G V   G N+ GQLG   +  R  P  +  L      + + AG S+ LAV  +G 
Sbjct: 310 ALRSDGSVWAWGHNSSGQLGDDSSTSRSVPVQVRGLS---GGMAVTAGSSHSLAVGSDGT 366

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           V+++GS  +   G G  ++   P  +Q         V V+AG  H +A  S G V
Sbjct: 367 VWAWGSNFSGERGEGTTNNRASPVQVQGLGGG----VAVAAGFNHSLAARSDGSV 417



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/147 (32%), Positives = 71/147 (48%), Gaps = 11/147 (7%)

Query: 111 AGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G + +  G +H+L++ S+ +V++ GS+  G LG G  T++ V    +     + VV V 
Sbjct: 594 SGGVAVAAGGFHSLVVRSDGTVWTWGSNSFGELGDGTTTSRSVP---VQVQGLSGVVAVD 650

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
           A  +H+  V   G V+T G NS    G   T R    P  V  L GV     T  L+   
Sbjct: 651 AGNSHSLAVRSDGTVWTWGYNSYGQLGDGTTTRRSV-PVQVPGLSGV-VAMATGALHP-- 706

Query: 230 FLTIR--GHVHTCGSNTHGQLGHGDTL 254
            L +R  G V   G N+ GQLG+G  L
Sbjct: 707 -LVVRSDGTVWAWGYNSFGQLGNGSPL 732


>gi|379318631|pdb|4DNV|A Chain A, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
           Protein Uvr8
 gi|379318632|pdb|4DNV|B Chain B, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
           Protein Uvr8
 gi|379318633|pdb|4DNV|C Chain C, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
           Protein Uvr8
 gi|379318634|pdb|4DNV|D Chain D, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
           Protein Uvr8
          Length = 370

 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 71/229 (31%), Positives = 115/229 (50%), Gaps = 7/229 (3%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I+ G  H++ L+S   V S G    G LGHG +     S T+++      +V V+   +H
Sbjct: 9   ISAGASHSVALLSGDIVCSWGRGEDGQLGHG-DAEDRPSPTQLSALDGHQIVSVTCGADH 67

Query: 175 AAFVLQSG-QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
                QSG +V++ G       GH +++  +F P  ++AL G+  KQ+  G +    +T+
Sbjct: 68  TVAYSQSGMEVYSWGWGDFGRLGHGNSS-DLFTPLPIKALHGIRIKQIACGDSHCLAVTM 126

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V + G N +GQLG GDT D   P+ I   E +  +  +AAG  +  AVT +G +Y +
Sbjct: 127 EGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGI-RIKMVAAGAEHTAAVTEDGDLYGW 185

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           G G    LG G++ D L P  + +    G  +  V+ G  H +++  SG
Sbjct: 186 GWGRYGNLGLGDRTDRLVPERVTS--TGGEKMSMVACGWRHTISVSYSG 232



 Score = 81.6 bits (200), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 65/180 (36%), Positives = 90/180 (50%), Gaps = 7/180 (3%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTA 223
           V+ +SA  +H+  +L    V + G       GH D  +RP   P  + AL G     VT 
Sbjct: 6   VLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRP--SPTQLSALDGHQIVSVTC 63

Query: 224 GLNFTGFLTIRG-HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
           G + T   +  G  V++ G    G+LGHG++ D  TP  I  L  +  + QIA G S+ L
Sbjct: 64  GADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGI-RIKQIACGDSHCL 122

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           AVT  G V S+G   N  LG G+  D L P+ IQ F  +GI +  V+AG EH  A+   G
Sbjct: 123 AVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAF--EGIRIKMVAAGAEHTAAVTEDG 180



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 96/209 (45%), Gaps = 6/209 (2%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HT  ++ +  ++  G    G LG G  T + V   R+       +  V+    H
Sbjct: 166 VAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVP-ERVTSTGGEKMSMVACGWRH 224

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V  SG ++T G +     GH D    +  P  +EAL      Q++ G   T  LT  
Sbjct: 225 TISVSYSGALYTYGWSKYGQLGHGDLEDHLI-PHKLEALSNSFISQISGGFRHTMALTSD 283

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
           G ++  G N  GQ+G G+ LD+ +P  +  P ++   VVQ++ G  + LAVT    V+++
Sbjct: 284 GKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQ--KVVQVSCGWRHTLAVTERNNVFAW 341

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           G G+N  LG GE  D   P+ I+     G
Sbjct: 342 GRGTNGQLGIGESVDRNFPKIIEALSVDG 370


>gi|5478530|gb|AAD43920.1|AF130441_1 UVB-resistance protein UVR8 [Arabidopsis thaliana]
          Length = 440

 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 71/229 (31%), Positives = 115/229 (50%), Gaps = 7/229 (3%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I+ G  H++ L+S   V S G    G LGHG +     S T+++      +V V+   +H
Sbjct: 20  ISAGASHSVALLSGDIVCSWGRGEDGQLGHG-DAEDRPSPTQLSALDGHQIVSVTCGADH 78

Query: 175 AAFVLQSG-QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
                QSG +V++ G       GH +++  +F P  ++AL G+  KQ+  G +    +T+
Sbjct: 79  TVAYSQSGMEVYSWGWGDFGRLGHGNSSD-LFTPLPIKALHGIRIKQIACGDSHCLAVTM 137

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V + G N +GQLG GDT D   P+ I   E +  +  +AAG  +  AVT +G +Y +
Sbjct: 138 EGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGI-PIKMVAAGAEHTAAVTEDGDLYGW 196

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           G G    LG G++ D L P  + +    G  +  V+ G  H +++  SG
Sbjct: 197 GWGRYGNLGLGDRTDRLVPERVTS--TGGEKMSMVACGWRHTISVSYSG 243



 Score = 80.9 bits (198), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 65/180 (36%), Positives = 90/180 (50%), Gaps = 7/180 (3%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTA 223
           V+ +SA  +H+  +L    V + G       GH D  +RP   P  + AL G     VT 
Sbjct: 17  VLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRP--SPTQLSALDGHQIVSVTC 74

Query: 224 GLNFTGFLTIRG-HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
           G + T   +  G  V++ G    G+LGHG++ D  TP  I  L  +  + QIA G S+ L
Sbjct: 75  GADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGI-RIKQIACGDSHCL 133

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           AVT  G V S+G   N  LG G+  D L P+ IQ F  +GI +  V+AG EH  A+   G
Sbjct: 134 AVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAF--EGIPIKMVAAGAEHTAAVTEDG 191



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 96/209 (45%), Gaps = 6/209 (2%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HT  ++ +  ++  G    G LG G  T + V   R+       +  V+    H
Sbjct: 177 VAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVP-ERVTSTGGEKMSMVACGWRH 235

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V  SG ++T G +     GH D    +  P  +EAL      Q++ G   T  LT  
Sbjct: 236 TISVSYSGALYTYGWSKYGQLGHGDLEDHLI-PHKLEALSNSFISQISGGWRHTMALTSD 294

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
           G ++  G N  GQ+G G+ LD+ +P  +  P ++   VVQ++ G  + LAVT    V+++
Sbjct: 295 GKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQ--KVVQVSCGWRHTLAVTERNNVFAW 352

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           G G+N  LG GE  D   P+ I+     G
Sbjct: 353 GRGTNGQLGIGESVDRNFPKIIEALSVDG 381



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 76/162 (46%), Gaps = 9/162 (5%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HT+ +S S ++++ G S  G LGHG      +   ++   S + + Q+S    H
Sbjct: 229 VACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPH-KLEALSNSFISQISGGWRH 287

Query: 175 AAFVLQSGQVFTCGDNSSFCCG---HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
              +   G+++  G N     G   + D   P+ + R  +  K V   QV+ G   T  +
Sbjct: 288 TMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPV-QVRFPDDQKVV---QVSCGWRHTLAV 343

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           T R +V   G  T+GQLG G+++DR  PK I  L   G+  Q
Sbjct: 344 TERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALSVDGASGQ 385


>gi|15237540|ref|NP_201191.1| protein UV-B resistance 8 [Arabidopsis thaliana]
 gi|10177674|dbj|BAB11034.1| UVB-resistance protein UVR8 [Arabidopsis thaliana]
 gi|21928123|gb|AAM78089.1| AT5g63860/MGI19_6 [Arabidopsis thaliana]
 gi|23308399|gb|AAN18169.1| At5g63860/MGI19_6 [Arabidopsis thaliana]
 gi|332010422|gb|AED97805.1| protein UV-B resistance 8 [Arabidopsis thaliana]
          Length = 440

 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 71/229 (31%), Positives = 115/229 (50%), Gaps = 7/229 (3%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I+ G  H++ L+S   V S G    G LGHG +     S T+++      +V V+   +H
Sbjct: 20  ISAGASHSVALLSGDIVCSWGRGEDGQLGHG-DAEDRPSPTQLSALDGHQIVSVTCGADH 78

Query: 175 AAFVLQSG-QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
                QSG +V++ G       GH +++  +F P  ++AL G+  KQ+  G +    +T+
Sbjct: 79  TVAYSQSGMEVYSWGWGDFGRLGHGNSSD-LFTPLPIKALHGIRIKQIACGDSHCLAVTM 137

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V + G N +GQLG GDT D   P+ I   E +  +  +AAG  +  AVT +G +Y +
Sbjct: 138 EGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGI-RIKMVAAGAEHTAAVTEDGDLYGW 196

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           G G    LG G++ D L P  + +    G  +  V+ G  H +++  SG
Sbjct: 197 GWGRYGNLGLGDRTDRLVPERVTS--TGGEKMSMVACGWRHTISVSYSG 243



 Score = 81.6 bits (200), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 65/180 (36%), Positives = 90/180 (50%), Gaps = 7/180 (3%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTA 223
           V+ +SA  +H+  +L    V + G       GH D  +RP   P  + AL G     VT 
Sbjct: 17  VLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRP--SPTQLSALDGHQIVSVTC 74

Query: 224 GLNFTGFLTIRG-HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
           G + T   +  G  V++ G    G+LGHG++ D  TP  I  L  +  + QIA G S+ L
Sbjct: 75  GADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGI-RIKQIACGDSHCL 133

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           AVT  G V S+G   N  LG G+  D L P+ IQ F  +GI +  V+AG EH  A+   G
Sbjct: 134 AVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAF--EGIRIKMVAAGAEHTAAVTEDG 191



 Score = 75.1 bits (183), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 96/209 (45%), Gaps = 6/209 (2%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HT  ++ +  ++  G    G LG G  T + V   R+       +  V+    H
Sbjct: 177 VAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVP-ERVTSTGGEKMSMVACGWRH 235

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V  SG ++T G +     GH D    +  P  +EAL      Q++ G   T  LT  
Sbjct: 236 TISVSYSGALYTYGWSKYGQLGHGDLEDHLI-PHKLEALSNSFISQISGGWRHTMALTSD 294

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
           G ++  G N  GQ+G G+ LD+ +P  +  P ++   VVQ++ G  + LAVT    V+++
Sbjct: 295 GKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQ--KVVQVSCGWRHTLAVTERNNVFAW 352

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           G G+N  LG GE  D   P+ I+     G
Sbjct: 353 GRGTNGQLGIGESVDRNFPKIIEALSVDG 381



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 76/162 (46%), Gaps = 9/162 (5%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HT+ +S S ++++ G S  G LGHG      +   ++   S + + Q+S    H
Sbjct: 229 VACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPH-KLEALSNSFISQISGGWRH 287

Query: 175 AAFVLQSGQVFTCGDNSSFCCG---HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
              +   G+++  G N     G   + D   P+ + R  +  K V   QV+ G   T  +
Sbjct: 288 TMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPV-QVRFPDDQKVV---QVSCGWRHTLAV 343

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           T R +V   G  T+GQLG G+++DR  PK I  L   G+  Q
Sbjct: 344 TERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALSVDGASGQ 385


>gi|345494033|ref|XP_001605647.2| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Nasonia
            vitripennis]
          Length = 4752

 Score = 90.9 bits (224), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 73/231 (31%), Positives = 111/231 (48%), Gaps = 13/231 (5%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSASENHA 175
            G++   L  +  VFS G    G LGHG      VS  +   I    +  +  ++    H+
Sbjct: 3018 GKHALALTQDGKVFSWGEGEDGKLGHGNR----VSLDKPRLIEALKSKRIRDIACGSGHS 3073

Query: 176  AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTI 233
            A +  +G+++T G       GH DT   + +P+LV+AL G    QV  G     T  LT 
Sbjct: 3074 AAIASNGELYTWGLGEYGRLGHGDTTTHL-KPKLVDALVGQRVIQVACGSRDAQTMALTE 3132

Query: 234  RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
             G V++ G    G+LG G +    +P  +  L  +G VVQ+  G  + LA+T  G V+++
Sbjct: 3133 DGSVYSWGDGDFGKLGRGGSDGCYSPLPVDRLNGLG-VVQVECGAQFSLALTKYGEVWTW 3191

Query: 294  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            G G  F LGHG  H   +P  ++  R  G  VV V+ G  H +A+  +G V
Sbjct: 3192 GKGDYFRLGHGNDHHVRRPTLVEGLR--GKKVVHVAVGALHCLAVTDAGQV 3240



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 71/221 (32%), Positives = 105/221 (47%), Gaps = 13/221 (5%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV--VQVSASENHAAFVLQSGQVFTC 187
             +++CG    G LG G +         I F S   +  V V +   HA  + Q G+VF+ 
Sbjct: 2975 KLYACGEGTNGRLGLG-DNNNVGEPKPIPFLSQYIIKKVAVHSGGKHALALTQDGKVFSW 3033

Query: 188  GDNSSFCCGHRDTNR-PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G+      GH   NR  + +PRL+EALK    + +  G   +  +   G ++T G   +G
Sbjct: 3034 GEGEDGKLGH--GNRVSLDKPRLIEALKSKRIRDIACGSGHSAAIASNGELYTWGLGEYG 3091

Query: 247  QLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGH 303
            +LGHGDT     PK +  L  VG  V+Q+A G   +  +A+T +G VYS+G G    LG 
Sbjct: 3092 RLGHGDTTTHLKPKLVDAL--VGQRVIQVACGSRDAQTMALTEDGSVYSWGDGDFGKLGR 3149

Query: 304  GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            G       P  +   R  G+ VV+V  G +  +AL   G V
Sbjct: 3150 GGSDGCYSPLPVD--RLNGLGVVQVECGAQFSLALTKYGEV 3188



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 70/258 (27%), Positives = 117/258 (45%), Gaps = 20/258 (7%)

Query: 93   VLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQC 151
            V   L+S++H           + + +G  H L +S+   V+S G    G LGHG      
Sbjct: 3969 VPTLLESIQH------VFIKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNR---- 4018

Query: 152  VSFTRINFPSA---AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR 208
            +++ R     A     +V ++   +H+A +  +G ++T G       GH D++  + +P 
Sbjct: 4019 ITYDRPKLIEALLGTEIVDIACGGHHSAAISSAGWLYTWGKGRYGRLGHGDSDDQL-KPT 4077

Query: 209  LVEALKGVPCKQVTAGLNFTGFL--TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            +V AL+G     V  G      L  T   +V + G   +G+LG G +     P  I  L 
Sbjct: 4078 VVTALQGYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPMKIESLA 4137

Query: 267  EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
             +G VV++  G  + +A+T +G VY++G G    LGHG      +PR +     +G  +V
Sbjct: 4138 GLG-VVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRKVSAL--QGKKIV 4194

Query: 327  RVSAGDEHVVALDSSGYV 344
             ++ G  H VA    G V
Sbjct: 4195 SIATGSLHCVACSDKGEV 4212



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 106/227 (46%), Gaps = 15/227 (6%)

Query: 125  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV----VQVSASENHAAFVLQ 180
            + ++  V++ G    G LG G   +  V        S  HV    V V++   H   +  
Sbjct: 3942 VTADGKVYATGYGALGRLGTGGVDSVMVPTL---LESIQHVFIKKVAVNSGGKHCLALSS 3998

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             G V++ G+      GH   NR  + RP+L+EAL G     +  G + +  ++  G ++T
Sbjct: 3999 EGHVYSWGEGDDGKLGH--GNRITYDRPKLIEALLGTEIVDIACGGHHSAAISSAGWLYT 4056

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLAVTGNGVVYSFGSGS 297
             G   +G+LGHGD+ D+  P  +  L+    V+ +A  +G +  L VT +  V+S+G G 
Sbjct: 4057 WGKGRYGRLGHGDSDDQLKPTVVTALQGY-KVIDVACGSGDAQTLCVTDDDNVWSWGDGD 4115

Query: 298  NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
               LG G       P  I++    G+ VV+V  G +  VAL  SG V
Sbjct: 4116 YGKLGRGGSDGCKVPMKIESL--AGLGVVKVECGSQFSVALTRSGAV 4160



 Score = 74.3 bits (181), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 110/228 (48%), Gaps = 7/228 (3%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G+++  L +   V+S G+   G LGHG ++  C     I   S   V  ++    ++A +
Sbjct: 510 GKHYLALTTKGIVYSWGNGDGGRLGHG-DSFSCDEPQVIEVLSDRTVTYIACGSTYSAAI 568

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIRGH 236
             +G++ T G  S    GH   +  I  P +V AL G     V   +G + T  +T  G 
Sbjct: 569 SSTGELLTWGRGSYGRLGHGICDD-ISIPTVVTALNGHTVTHVACGSGDSQTLCVTNSGI 627

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           V + G   +G+LG G +     PK +  L +  +VV++  G  +  A+T +G VY++G G
Sbjct: 628 VFSWGDGDYGKLGRGGSDGSKLPKIVDKLLD-QNVVKVFCGGQFSAALTAHGEVYTWGKG 686

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            ++ LGHG +     P+ ++  R K +    +S G+ H++A+     V
Sbjct: 687 DHYRLGHGNEEHVRFPKLVEGLRNKKVR--DLSVGNLHILAITEDQLV 732



 Score = 71.2 bits (173), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 62/231 (26%), Positives = 104/231 (45%), Gaps = 8/231 (3%)

Query: 114  MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            + I  G +H+  IS++  +++ G    G LGHG    Q +  T +       V+ V+   
Sbjct: 4036 VDIACGGHHSAAISSAGWLYTWGKGRYGRLGHGDSDDQ-LKPTVVTALQGYKVIDVACGS 4094

Query: 173  NHAAF--VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
              A    V     V++ GD      G R  +     P  +E+L G+   +V  G  F+  
Sbjct: 4095 GDAQTLCVTDDDNVWSWGDGDYGKLG-RGGSDGCKVPMKIESLAGLGVVKVECGSQFSVA 4153

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            LT  G V+T G   + +LGHG       P+ ++ L+    +V IA G  + +A +  G V
Sbjct: 4154 LTRSGAVYTWGKGDYHRLGHGTDDHVRRPRKVSALQG-KKIVSIATGSLHCVACSDKGEV 4212

Query: 291  YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
            Y++G      LG G  H +  PR +     +G ++ RV+ G  H +A  ++
Sbjct: 4213 YTWGDNDEGQLGDGTTHAQQSPRLVHAL--QGKNITRVACGSAHTLAWSTT 4261



 Score = 67.8 bits (164), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 55/190 (28%), Positives = 90/190 (47%), Gaps = 5/190 (2%)

Query: 155  TRINF-PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            T ++F  S   VVQ   +   A+ V Q+  V+  G N     G    ++ I  P   E L
Sbjct: 2894 TSVSFLASDWEVVQEQMTAQRASDVQQNAAVYVWGLNDKDQLGGLKGSK-IKLPVHSEVL 2952

Query: 214  KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE-VGSVV 272
              +    +  G      ++  G ++ CG  T+G+LG GD  +   PK I  L + +   V
Sbjct: 2953 SKLKPIHIAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDNNNVGEPKPIPFLSQYIIKKV 3012

Query: 273  QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
             + +G  + LA+T +G V+S+G G +  LGHG +    +PR I+  + K I    ++ G 
Sbjct: 3013 AVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNRVSLDKPRLIEALKSKRIR--DIACGS 3070

Query: 333  EHVVALDSSG 342
             H  A+ S+G
Sbjct: 3071 GHSAAIASNG 3080



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS--ASE 172
            I  G  H+  I SN  +++ G    G LGHG +TT  +    ++      V+QV+  + +
Sbjct: 3066 IACGSGHSAAIASNGELYTWGLGEYGRLGHG-DTTTHLKPKLVDALVGQRVIQVACGSRD 3124

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
                 + + G V++ GD      G R  +   + P  V+ L G+   QV  G  F+  LT
Sbjct: 3125 AQTMALTEDGSVYSWGDGDFGKLG-RGGSDGCYSPLPVDRLNGLGVVQVECGAQFSLALT 3183

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG+      P  +  L     VV +A G  + LAVT  G VY+
Sbjct: 3184 KYGEVWTWGKGDYFRLGHGNDHHVRRPTLVEGLRG-KKVVHVAVGALHCLAVTDAGQVYA 3242

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +       ++  RV+ G  H +A
Sbjct: 3243 WGDNDHGQQGNGSTMVNRKPSLVHNLEDAKVN--RVACGSSHSIA 3285



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/176 (27%), Positives = 78/176 (44%), Gaps = 5/176 (2%)

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHG--PETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           Y   + S   + + G    G LGHG   + +     T +N  +  HV    + ++    V
Sbjct: 564 YSAAISSTGELLTWGRGSYGRLGHGICDDISIPTVVTALNGHTVTHVA-CGSGDSQTLCV 622

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
             SG VF+ GD      G   ++     P++V+ L      +V  G  F+  LT  G V+
Sbjct: 623 TNSGIVFSWGDGDYGKLGRGGSDGSKL-PKIVDKLLDQNVVKVFCGGQFSAALTAHGEVY 681

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           T G   H +LGHG+      PK +  L     V  ++ G  ++LA+T + +VY +G
Sbjct: 682 TWGKGDHYRLGHGNEEHVRFPKLVEGLRN-KKVRDLSVGNLHILAITEDQLVYGWG 736



 Score = 51.2 bits (121), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 59/113 (52%), Gaps = 7/113 (6%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  P P +S++ L  +    Q+A G   + AVT +G VY
Sbjct: 3894 GAIYGWGHNHRGQLGGLEGAKVKLPLPCESLSALRPI----QLAGGEQTLFAVTADGKVY 3949

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            + G G+   LG G     + P  +++ +   I  V V++G +H +AL S G+V
Sbjct: 3950 ATGYGALGRLGTGGVDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSEGHV 4002



 Score = 42.7 bits (99), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 52/110 (47%), Gaps = 5/110 (4%)

Query: 237  VHTCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
            V+  G N   QLG   G  +  P    +  L ++  +  IA G   +  V+  G +Y+ G
Sbjct: 2924 VYVWGLNDKDQLGGLKGSKIKLPVHSEV--LSKLKPI-HIAGGSKTLFVVSQEGKLYACG 2980

Query: 295  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             G+N  LG G+ ++  +P+ I    +  I  V V +G +H +AL   G V
Sbjct: 2981 EGTNGRLGLGDNNNVGEPKPIPFLSQYIIKKVAVHSGGKHALALTQDGKV 3030


>gi|195060098|ref|XP_001995753.1| GH17927 [Drosophila grimshawi]
 gi|193896539|gb|EDV95405.1| GH17927 [Drosophila grimshawi]
          Length = 4933

 Score = 90.9 bits (224), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 75/229 (32%), Positives = 108/229 (47%), Gaps = 9/229 (3%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAF 177
            G++   L  +  VFS G    G LGHG  TT  +   R +    A  +  ++   +H+A 
Sbjct: 3008 GKHALALTLDGKVFSWGEGEDGKLGHGNRTT--LDKPRLVEALRAKKIRDIACGSSHSAA 3065

Query: 178  VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRG 235
            +   G+++T G       GH D N    +P+LV AL G    QV  G     T  LT  G
Sbjct: 3066 ISSQGELYTWGLGEYGRLGHGD-NATQLKPKLVTALCGSRVIQVACGSRDAQTLALTEDG 3124

Query: 236  HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
             V + G    G+LG G +    TP  I  L  +G VVQI  G  + LA+T  G V+++G 
Sbjct: 3125 AVFSWGDGDFGKLGRGGSEGSATPHEIERLSGIG-VVQIECGAQFSLALTRAGEVWTWGK 3183

Query: 296  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            G  + LGHG      +P+ I   R  G  V+ V+ G  H +A+  +G V
Sbjct: 3184 GDYYRLGHGGDQHVRKPQPIAGLR--GRRVIHVAVGALHCLAVTDAGQV 3230



 Score = 85.5 bits (210), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 71/224 (31%), Positives = 107/224 (47%), Gaps = 15/224 (6%)

Query: 128  NSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSASENHAAFVLQSGQV 184
            +  VF+CG    G LG G   T  V       +        V V +   HA  +   G+V
Sbjct: 2963 DGKVFACGEGTNGRLGLG--VTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKV 3020

Query: 185  FTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            F+ G+      GH   NR    +PRLVEAL+    + +  G + +  ++ +G ++T G  
Sbjct: 3021 FSWGEGEDGKLGH--GNRTTLDKPRLVEALRAKKIRDIACGSSHSAAISSQGELYTWGLG 3078

Query: 244  THGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAG--PSYMLAVTGNGVVYSFGSGSNFC 300
             +G+LGHGD   +  PK +  L   GS V+Q+A G   +  LA+T +G V+S+G G    
Sbjct: 3079 EYGRLGHGDNATQLKPKLVTAL--CGSRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGK 3136

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            LG G       P  I+  R  GI VV++  G +  +AL  +G V
Sbjct: 3137 LGRGGSEGSATPHEIE--RLSGIGVVQIECGAQFSLALTRAGEV 3178



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 109/238 (45%), Gaps = 14/238 (5%)

Query: 113  NMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQV 168
             + + +G  H L L ++  V++ G    G LGHG      +S+ R   +   +   V  +
Sbjct: 4159 KVAVNSGGKHCLALTTDGEVYAWGEGEDGKLGHGNR----LSYDRPKLLEHLNGMSVADI 4214

Query: 169  SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
            +    H+A +  SG V T G       GH D+   + RP+LVEAL G     +  G    
Sbjct: 4215 ACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQL-RPKLVEALLGYRAIDIACGSGDA 4273

Query: 229  GFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
              L I    +V + G   +G+LG G +     P  I  L  +G V+++  G  + +A+T 
Sbjct: 4274 QTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLG-VIKVECGSQFSVALTK 4332

Query: 287  NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            +G VY++G G    LGHG      +P+ +     +G  ++ ++ G  H VA   +G V
Sbjct: 4333 SGAVYTWGKGDFHRLGHGSVDHVRRPKKVAAL--QGKKIISIATGSLHCVACSDAGEV 4388



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 51/164 (31%), Positives = 83/164 (50%), Gaps = 15/164 (9%)

Query: 185 FTCGDNSSFCCGHRDTNR---PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 241
           +  GDN     GH D +    P     LV  +K V C     G +++  +T+RG+++T G
Sbjct: 665 WGTGDNRRL--GHGDCHSRELPTKIESLVRRVKSVYC-----GCSYSAAITLRGNLYTWG 717

Query: 242 SNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
              +G+LGHG + D+  P  +  L++   V V + +G ++ L +T  G+VY++G G    
Sbjct: 718 RGNYGRLGHGISDDQCLPTMVMALKDHQVVDVALGSGDAHTLCLTNEGLVYAWGDGDYGK 777

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           LG+   +  LQP  I+   R    V RV AG +  +AL   G +
Sbjct: 778 LGNASCNSSLQPLLIECLPR----VQRVFAGSQFSLALTGEGQL 817



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 97/225 (43%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  IS+   +++ G    G LGHG   TQ +    +     + V+QV+     
Sbjct: 3056 IACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQ-LKPKLVTALCGSRVIQVACGSRD 3114

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    + + G VF+ GD      G R  +     P  +E L G+   Q+  G  F+  LT
Sbjct: 3115 AQTLALTEDGAVFSWGDGDFGKLG-RGGSEGSATPHEIERLSGIGVVQIECGAQFSLALT 3173

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG       P+ IA L     V+ +A G  + LAVT  G VY+
Sbjct: 3174 RAGEVWTWGKGDYYRLGHGGDQHVRKPQPIAGLRGR-RVIHVAVGALHCLAVTDAGQVYA 3232

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G G      +P  +       + V RV+ G  H +A
Sbjct: 3233 WGDNDHGQQGSGNTFVNKKPALVIGL--DAVFVNRVACGSSHSMA 3275



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 69/239 (28%), Positives = 107/239 (44%), Gaps = 30/239 (12%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHG-----PETTQCVSFTRINFPSAAHVVQVSASEN 173
           GR+   + +N + +S G+     LGHG        T+  S  R        V  V    +
Sbjct: 650 GRHFLAVDNNFNAYSWGTGDNRRLGHGDCHSRELPTKIESLVR-------RVKSVYCGCS 702

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFL 231
           ++A +   G ++T G  +    GH  ++     P +V ALK      V   +G   T  L
Sbjct: 703 YSAAITLRGNLYTWGRGNYGRLGHGISDDQCL-PTMVMALKDHQVVDVALGSGDAHTLCL 761

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGNGV 289
           T  G V+  G   +G+LG+          S+ PL  E +  V ++ AG  + LA+TG G 
Sbjct: 762 TNEGLVYAWGDGDYGKLGNASC-----NSSLQPLLIECLPRVQRVFAGSQFSLALTGEGQ 816

Query: 290 VYSFGSGSNFCLGHGEQHDELQ----PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           +YS+G  S  CLGH      +Q    PR I + + K   +V V+ G  H +AL S+G +
Sbjct: 817 LYSWGKAS--CLGHQLVERNVQGCSVPRLITSLQHK--RIVDVAVGVTHCLALSSAGEI 871


>gi|402869932|ref|XP_003898997.1| PREDICTED: LOW QUALITY PROTEIN: E3 ISG15--protein ligase HERC5
           [Papio anubis]
          Length = 1023

 Score = 90.9 bits (224), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 71/208 (34%), Positives = 107/208 (51%), Gaps = 10/208 (4%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QIT G YH+L +S    +F+ G +L G LG G +     +   +   +   + Q+SA E
Sbjct: 140 IQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGE 199

Query: 173 NHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            H+  +  SG V++ G N       GH ++      P L+EAL     + +  G + +  
Sbjct: 200 AHSMALSMSGNVYSWGKNEFGQLGLGHTESKD---SPSLIEALDNQKVEFLACGGSHSAL 256

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGNG 288
           LT  G + T G+  HGQLGH  T +   P  +A L  VG+ V QIA G  + LA V+  G
Sbjct: 257 LTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAEL--VGNRVTQIACGRWHTLAYVSDLG 314

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
            V+SFGSG +  LG+G   D+L P  ++
Sbjct: 315 KVFSFGSGKDGQLGNGGTLDQLIPLPVK 342



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/173 (29%), Positives = 91/173 (52%), Gaps = 3/173 (1%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           ++Q++  + H+  + + G++F  G N     G          P++VE L GVP  Q++AG
Sbjct: 139 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAG 198

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
              +  L++ G+V++ G N  GQLG G T  + +P  I  L+    V  +A G S+   +
Sbjct: 199 EAHSMALSMSGNVYSWGKNEFGQLGLGHTESKDSPSLIEALDN-QKVEFLACGGSHSALL 257

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           T +G++++FG+G +  LGH    +EL+P  +      G  V +++ G  H +A
Sbjct: 258 TQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELV--GNRVTQIACGRWHTLA 308



 Score = 45.4 bits (106), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 14/131 (10%)

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP--LEEVGSV--VQIA 275
           Q+T G   +  L+  G +   G N HGQLG G    R  P +  P  +E +  V   QI+
Sbjct: 141 QITCGDYHSLALSKGGELFAWGQNLHGQLGVG----RKFPSTTTPQIVEHLAGVPLAQIS 196

Query: 276 AGPSYMLAVTGNGVVYSFGSGS--NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           AG ++ +A++ +G VYS+G        LGH E  D   P  I+    + +    ++ G  
Sbjct: 197 AGEAHSMALSMSGNVYSWGKNEFGQLGLGHTESKD--SPSLIEALDNQKVEF--LACGGS 252

Query: 334 HVVALDSSGYV 344
           H   L   G +
Sbjct: 253 HSALLTQDGLL 263


>gi|328793081|ref|XP_395007.4| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Apis mellifera]
          Length = 4643

 Score = 90.9 bits (224), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 71/220 (32%), Positives = 110/220 (50%), Gaps = 11/220 (5%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV--VQVSASENHAAFVLQSGQVFTC 187
             +++CG    G LG G ++  C     I F S   +  V V +   HA  + Q G+VF+ 
Sbjct: 2843 KLYACGEGTNGRLGLGDDSNVCEP-KPIPFLSQYVIKKVAVHSGGKHALALTQDGKVFSW 2901

Query: 188  GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
            G+      GH ++   + +PRL+E+LK    + +  G   +  +T  G ++T G   +G+
Sbjct: 2902 GEGEDGKLGHGNSIS-LDKPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGR 2960

Query: 248  LGHGDTLDRPTPKSIAPLEEVGS-VVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGHG 304
            LGHGDT  +  PK +  L  VG  V+QIA G   +  +A+T +G+VYS+G G    LG G
Sbjct: 2961 LGHGDTATQSKPKLVQSL--VGQRVIQIACGSRDAQTMALTADGLVYSWGDGDFGKLGRG 3018

Query: 305  EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
                   P  I   R  G+ VV++  G +  +AL   G V
Sbjct: 3019 GSDGCYTPLLID--RLNGLGVVQIECGAQFSLALTKYGEV 3056



 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/231 (31%), Positives = 109/231 (47%), Gaps = 13/231 (5%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSASENHA 175
            G++   L  +  VFS G    G LGHG      +S  +   I    +  +  ++    H+
Sbjct: 2886 GKHALALTQDGKVFSWGEGEDGKLGHG----NSISLDKPRLIESLKSKRIRDIACGSGHS 2941

Query: 176  AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTI 233
            A +  SG+++T G       GH DT     +P+LV++L G    Q+  G     T  LT 
Sbjct: 2942 AAITSSGELYTWGLGEYGRLGHGDTATQ-SKPKLVQSLVGQRVIQIACGSRDAQTMALTA 3000

Query: 234  RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
             G V++ G    G+LG G +    TP  I  L  +G VVQI  G  + LA+T  G V+++
Sbjct: 3001 DGLVYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLG-VVQIECGAQFSLALTKYGEVWTW 3059

Query: 294  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            G G  F LGHG  H   +P  ++  R  G  ++ V+ G  H +A+   G V
Sbjct: 3060 GKGDYFRLGHGNDHHVRKPTLVEGLR--GKKIIHVAVGALHCLAVTDIGQV 3108



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 112/238 (47%), Gaps = 21/238 (8%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 169
           + G ++  L  ++SV+S G+  CG LGHG       P+  + +    I F        ++
Sbjct: 509 SDGTHYLALTQDNSVYSWGNGECGRLGHGNMTWYDEPKLIEALVEKNITF--------IA 560

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF-- 227
               ++A +  +G+++T G  +    GH ++++ +  P LV AL G     V  G     
Sbjct: 561 CGSTYSAALSSNGELYTWGRGNYGKLGHGNSDKDVMIPTLVTALNGHMVVYVACGGGRDP 620

Query: 228 -TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
            T  +T  G V + G   HG+LG G      TPK +  L ++ +V ++  G  +  A+T 
Sbjct: 621 QTLCVTASGIVFSWGDGNHGKLGRGGCDGSKTPKIVDKLLDI-NVAKVYCGQQFSAALTA 679

Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            G VY++G G ++ LGHG +     P+ I   + K I  + +  G  HV+AL     V
Sbjct: 680 YGEVYTWGKGEDYKLGHGNEDHVRYPKIIDILKTKKIKDLYI--GHLHVLALTEDQLV 735



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 112/236 (47%), Gaps = 17/236 (7%)

Query: 118  TGRYHTL--LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV----VQVSAS 171
            TG   TL  + ++  V++ G    G LG G   +  V        S  HV    V V++ 
Sbjct: 3823 TGGEQTLFAVTADGKVYATGYGAVGRLGIGGTDSVMVPTL---LESIQHVFVKKVAVNSG 3879

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFTGF 230
              H   +   G V++ G+      GH   NR  + RP+L+E L G     +  G + +  
Sbjct: 3880 GKHCLALSSEGHVYSWGEGDDGKLGH--GNRLSYDRPKLIEELLGTEIVDIACGGHHSAA 3937

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLAVTGNG 288
            +T  G ++T G   +G+LGHGD+ D+ TPK I  L++   V+ +A  +G +  L VT + 
Sbjct: 3938 ITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLIEALQDY-KVIDVACGSGDAQTLCVTDDD 3996

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             V+S+G G    LG G       P  I++    G+ V++V  G +  VAL  SG +
Sbjct: 3997 NVWSWGDGDYGKLGRGGSDGCKIPMKIESL--AGLGVIKVECGSQFSVALTRSGAI 4050



 Score = 78.6 bits (192), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 67/255 (26%), Positives = 115/255 (45%), Gaps = 20/255 (7%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSF 154
             L+S++H           + + +G  H L +S+   V+S G    G LGHG      +S+
Sbjct: 3862 LLESIQH------VFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNR----LSY 3911

Query: 155  TR---INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE 211
             R   I       +V ++   +H+A +  +G ++T G       GH D+   +  P+L+E
Sbjct: 3912 DRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQL-TPKLIE 3970

Query: 212  ALKGVPCKQVTAGLNFTGFL--TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 269
            AL+      V  G      L  T   +V + G   +G+LG G +     P  I  L  +G
Sbjct: 3971 ALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLG 4030

Query: 270  SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
             V+++  G  + +A+T +G +Y++G G    LGHG      +PR +     +G  ++ ++
Sbjct: 4031 -VIKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGTDDHVRRPRKVAAL--QGKKIISIA 4087

Query: 330  AGDEHVVALDSSGYV 344
             G  H VA    G V
Sbjct: 4088 TGSLHCVACTDKGEV 4102



 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/227 (25%), Positives = 100/227 (44%), Gaps = 8/227 (3%)

Query: 114  MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            + I  G +H+  I+++  +++ G    G LGHG    Q ++   I       V+ V+   
Sbjct: 3926 VDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQ-LTPKLIEALQDYKVIDVACGS 3984

Query: 173  NHAAF--VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
              A    V     V++ GD      G R  +     P  +E+L G+   +V  G  F+  
Sbjct: 3985 GDAQTLCVTDDDNVWSWGDGDYGKLG-RGGSDGCKIPMKIESLAGLGVIKVECGSQFSVA 4043

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            LT  G ++T G   + +LGHG       P+ +A L+    ++ IA G  + +A T  G V
Sbjct: 4044 LTRSGAIYTWGKGDYHRLGHGTDDHVRRPRKVAALQG-KKIISIATGSLHCVACTDKGEV 4102

Query: 291  YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +++G      LG G      +PR +     +G  + RV+ G  H +A
Sbjct: 4103 FTWGDNDEGQLGDGTTSALQRPRLVHAL--QGKKITRVACGSAHTLA 4147



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 69/140 (49%), Gaps = 3/140 (2%)

Query: 204  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
            I  P   E L  +    +  G      ++  G ++ CG  T+G+LG GD  +   PK I 
Sbjct: 2811 IKLPVYSEVLSKLKPVHIAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDSNVCEPKPIP 2870

Query: 264  PLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
             L + V   V + +G  + LA+T +G V+S+G G +  LGHG      +PR I++ + K 
Sbjct: 2871 FLSQYVIKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNSISLDKPRLIESLKSKR 2930

Query: 323  IHVVRVSAGDEHVVALDSSG 342
            I    ++ G  H  A+ SSG
Sbjct: 2931 IR--DIACGSGHSAAITSSG 2948



 Score = 60.8 bits (146), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 60/225 (26%), Positives = 97/225 (43%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS--ASE 172
            I  G  H+  I++S  +++ G    G LGHG   TQ      +       V+Q++  + +
Sbjct: 2934 IACGSGHSAAITSSGELYTWGLGEYGRLGHGDTATQSKP-KLVQSLVGQRVIQIACGSRD 2992

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
                 +   G V++ GD      G R  +   + P L++ L G+   Q+  G  F+  LT
Sbjct: 2993 AQTMALTADGLVYSWGDGDFGKLG-RGGSDGCYTPLLIDRLNGLGVVQIECGAQFSLALT 3051

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG+      P  +  L     ++ +A G  + LAVT  G VY+
Sbjct: 3052 KYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRG-KKIIHVAVGALHCLAVTDIGQVYA 3110

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +         V RVS G  H +A
Sbjct: 3111 WGDNDHGQQGNGTTIVNKKPSLVHEL--DDARVNRVSCGSSHSIA 3153



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 68/139 (48%), Gaps = 3/139 (2%)

Query: 207  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            P L E+L  +   Q+T G      +T  G V+  G    G+LG G T     P  +  ++
Sbjct: 3808 PVLCESLSALRPVQLTGGEQTLFAVTADGKVYATGYGAVGRLGIGGTDSVMVPTLLESIQ 3867

Query: 267  EV-GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
             V    V + +G  + LA++  G VYS+G G +  LGHG +    +P+ I+     G  +
Sbjct: 3868 HVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLSYDRPKLIEELL--GTEI 3925

Query: 326  VRVSAGDEHVVALDSSGYV 344
            V ++ G  H  A+ S+G++
Sbjct: 3926 VDIACGGHHSAAITSAGWL 3944



 Score = 45.8 bits (107), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 7/113 (6%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  P   +S++ L  V    Q+  G   + AVT +G VY
Sbjct: 3784 GAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPV----QLTGGEQTLFAVTADGKVY 3839

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            + G G+   LG G     + P  +++ +   +  V V++G +H +AL S G+V
Sbjct: 3840 ATGYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHV 3892



 Score = 43.9 bits (102), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 51/110 (46%), Gaps = 5/110 (4%)

Query: 237  VHTCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
            V+  G N   QLG   G  +  P    +  L ++  V  IA G   +  V+  G +Y+ G
Sbjct: 2792 VYVWGLNDKDQLGGLKGSKIKLPVYSEV--LSKLKPV-HIAGGSKTLFVVSQEGKLYACG 2848

Query: 295  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             G+N  LG G+  +  +P+ I    +  I  V V +G +H +AL   G V
Sbjct: 2849 EGTNGRLGLGDDSNVCEPKPIPFLSQYVIKKVAVHSGGKHALALTQDGKV 2898



 Score = 40.8 bits (94), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 72/168 (42%), Gaps = 14/168 (8%)

Query: 122 HTLLISNSS-VFSCGSSLCGVLGHG----PETTQCVS-FTRINFPSAAHVVQVSASENHA 175
            TL ++ S  VFS G    G LG G     +T + V     IN      V +V   +  +
Sbjct: 621 QTLCVTASGIVFSWGDGNHGKLGRGGCDGSKTPKIVDKLLDIN------VAKVYCGQQFS 674

Query: 176 AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 235
           A +   G+V+T G    +  GH + +  +  P++++ LK    K +  G      LT   
Sbjct: 675 AALTAYGEVYTWGKGEDYKLGHGNEDH-VRYPKIIDILKTKKIKDLYIGHLHVLALTEDQ 733

Query: 236 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+  G N HGQ+        P P ++ P     +V+ +A GP+   A
Sbjct: 734 LVYGWGRNDHGQIDPALGTIVPEP-TLCPTFSGKNVIGLACGPTQSFA 780


>gi|345324538|ref|XP_003430830.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Ornithorhynchus
           anatinus]
          Length = 3053

 Score = 90.9 bits (224), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 69/237 (29%), Positives = 112/237 (47%), Gaps = 17/237 (7%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 169
           + G ++  L +   VFS G    G LGHG       P+    +S  +    +  HVV ++
Sbjct: 207 SDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQ----AGKHVVHIA 262

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V+ G     
Sbjct: 263 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTI-PMLVTGLKGLKVIDVSCGSGDAQ 321

Query: 230 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
            L +   G V + G   +G+LG G +    TPK I  L+++  +V++  G  + +A+T +
Sbjct: 322 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DIVKVRCGSQFSIALTKD 380

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G VYS+G G N  LGHG +     P+ ++    +G  VV V+AG  H +AL     V
Sbjct: 381 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVVDVAAGSTHCLALTEDSEV 435



 Score = 85.5 bits (210), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 118/251 (47%), Gaps = 12/251 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    V+  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 2249 LLESIQHV--FVKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 2302

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             +       VV ++A   H+A +  +G +++ G       GH D+   + +P+LVEAL+G
Sbjct: 2303 VVESLRGIEVVDIAAGGAHSACITVAGDLYSWGKGRYGRLGHGDSEDQL-KPKLVEALQG 2361

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 2362 YRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 2420

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 2421 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 2478

Query: 334  HVVALDSSGYV 344
            H V     G V
Sbjct: 2479 HCVCCTEDGEV 2489



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 68/221 (30%), Positives = 109/221 (49%), Gaps = 12/221 (5%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFT 186
             V++CG +  G LG G  ++  V   R     + +VV+   V +   HA  +   G+VF+
Sbjct: 1202 KVYACGEATNGRLGLGI-SSGTVPLPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFS 1260

Query: 187  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
             G+      GH  +     +PRL+EALK    + +  G + +  +T  G ++T G   +G
Sbjct: 1261 WGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYG 1319

Query: 247  QLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGH 303
            +LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG 
Sbjct: 1320 RLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGR 1377

Query: 304  GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            G       P+ I+  R  G  V ++  G +  +AL  SG V
Sbjct: 1378 GGSEGCNVPQNIE--RLNGQGVCQIECGAQFSLALTKSGVV 1416



 Score = 71.2 bits (173), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 59/187 (31%), Positives = 93/187 (49%), Gaps = 20/187 (10%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++ +E     + ++G+V+    NS       DT      P+LV+ L      +V A 
Sbjct: 158 VTQIACAEKRFLILSRNGRVYVQAYNS-------DT----LGPQLVQGLASRNIVKVAAH 206

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V + G    G+LGHGDT+    PK I+ L  ++ G  VV IA G +
Sbjct: 207 SDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVHIACGST 266

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   D+  P  +     KG+ V+ VS  +GD   +A
Sbjct: 267 YSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGL--KGLKVIDVSCGSGDAQTLA 324

Query: 338 LDSSGYV 344
           +  +G V
Sbjct: 325 VTENGQV 331



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/181 (30%), Positives = 82/181 (45%), Gaps = 5/181 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+   L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 1246 GRHAMALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAI 1304

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 1305 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 1363

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 1364 VFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGRG 1422

Query: 297  S 297
             
Sbjct: 1423 D 1423



 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 54/184 (29%), Positives = 90/184 (48%), Gaps = 6/184 (3%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
            +A  +++  AS   +A  +++ +VF  G N     G    ++ I  P   E L  +   Q
Sbjct: 1129 NAGSLIRKKASGLESAATIRT-KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQ 1186

Query: 221  VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGP 278
            V  G      +T+ G V+ CG  T+G+LG G  +   P P+ I  L   V   V + +G 
Sbjct: 1187 VAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPLPRQITALSNYVVKKVAVHSGG 1246

Query: 279  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             + +A+T +G V+S+G G +  LGH  + +  +PR I+  + K I    ++ G  H  A+
Sbjct: 1247 RHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAAI 1304

Query: 339  DSSG 342
             SSG
Sbjct: 1305 TSSG 1308



 Score = 64.3 bits (155), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 60/222 (27%), Positives = 97/222 (43%), Gaps = 7/222 (3%)

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA--FV 178
           Y   + +   +++ G    G LGHG    Q +            V+ VS     A    V
Sbjct: 267 YSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGL-KGLKVIDVSCGSGDAQTLAV 325

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
            ++GQV++ GD      G R  +     P+L+E L+ +   +V  G  F+  LT  G V+
Sbjct: 326 TENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVY 384

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           + G   + +LGHG       PK +  L+    VV +AAG ++ LA+T +  V+S+GS   
Sbjct: 385 SWGKGDNQRLGHGTEEHVRYPKLLEGLQG-KKVVDVAAGSTHCLALTEDSEVHSWGSNDQ 443

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
                  +  + QP A+     K  H+V ++ G     A  S
Sbjct: 444 CQHFDTLRITKPQPSALPGLDTK--HIVGIACGPAQSFAWSS 483



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 2371 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 2429

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 2430 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 2488

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    + ++A G ++ LA
Sbjct: 2489 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKINRVACGSAHTLA 2534



 Score = 55.1 bits (131), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       +V+V      + 
Sbjct: 317 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDIVKVRCGSQFSI 375

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 376 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVVDVAAGSTHCLALTEDSE 434

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 435 VHSWGSNDQCQ--HFDTLRITKPQPSALPGL-DTKHIVGIACGPAQSFA 480



 Score = 45.8 bits (107), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 66/137 (48%), Gaps = 3/137 (2%)

Query: 207  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            P   EAL  +   Q+  G      +T  G ++  G    G+LG G T    TP  +  ++
Sbjct: 2195 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQ 2254

Query: 267  EV-GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
             V    V + +G  + LA++  G VYS+G   +  LGHG +    +PR +++ R  GI V
Sbjct: 2255 HVFVKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVVESLR--GIEV 2312

Query: 326  VRVSAGDEHVVALDSSG 342
            V ++AG  H   +  +G
Sbjct: 2313 VDIAAGGAHSACITVAG 2329



 Score = 40.0 bits (92), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 57/113 (50%), Gaps = 7/113 (6%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 2171 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 2226

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            + G G+   LG G       P  +++ +   +  V V++G +H +AL S G V
Sbjct: 2227 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFVKKVAVNSGGKHCLALSSEGEV 2279


>gi|428181106|gb|EKX49971.1| hypothetical protein GUITHDRAFT_161991 [Guillardia theta CCMP2712]
          Length = 658

 Score = 90.9 bits (224), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 66/234 (28%), Positives = 107/234 (45%), Gaps = 19/234 (8%)

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA--AHVVQVSASENHAAFV 178
           +   L+    +++ G +  G LG G  T+  +       PS    HV  ++    H   +
Sbjct: 172 FSAALMEGGQLYTWGCNRYGQLGQGDRTSSAIPRM---LPSMNHRHVHLMACGAAHIVVL 228

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
             S  V+T G+NS    GH    +   +P+ V  + G+  KQ+ AG N +  +T  G ++
Sbjct: 229 TTSRDVYTWGNNSYGQLGHGFRKKHCLQPKSVRVMSGLDIKQIVAGENHSCVMTSFGDIY 288

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           T G    GQLGHGD   +  P  ++PL+       I +G  +++A+T +G VYS+G    
Sbjct: 289 TWGRGDFGQLGHGDMESKDIPTLLSPLDPKTQASLIVSGADFIMAMTYSGAVYSWGRNCF 348

Query: 299 FCLGHG-EQH---------DELQPRAIQTF----RRKGIHVVRVSAGDEHVVAL 338
             LGHG + H         D + P+ I  F        I +  +S G  HV+A+
Sbjct: 349 GQLGHGVDMHYSKSNRFPSDVISPKIISFFAASEEHDAISLSSISCGSHHVLAI 402



 Score = 68.9 bits (167), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 62/234 (26%), Positives = 105/234 (44%), Gaps = 22/234 (9%)

Query: 124 LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 183
           +L ++  V++ G++  G LGHG     C+    +   S   + Q+ A ENH+  +   G 
Sbjct: 227 VLTTSRDVYTWGNNSYGQLGHGFRKKHCLQPKSVRVMSGLDIKQIVAGENHSCVMTSFGD 286

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ---VTAGLNFTGFLTIRGHVHTC 240
           ++T G       GH D       P L+  L   P  Q   + +G +F   +T  G V++ 
Sbjct: 287 IYTWGRGDFGQLGHGDMESKDI-PTLLSPLD--PKTQASLIVSGADFIMAMTYSGAVYSW 343

Query: 241 GSNTHGQLGHGDTL----------DRPTPKSI---APLEE--VGSVVQIAAGPSYMLAVT 285
           G N  GQLGHG  +          D  +PK I   A  EE    S+  I+ G  ++LA+T
Sbjct: 344 GRNCFGQLGHGVDMHYSKSNRFPSDVISPKIISFFAASEEHDAISLSSISCGSHHVLAIT 403

Query: 286 -GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
                ++++G G +  LG   +    +P   +  + KG+ V+  +  + H V +
Sbjct: 404 EKKDTLFAWGRGEHGQLGLDPRDTSFRPIPQEVKKMKGMIVLAAACSENHSVVV 457



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 88/178 (49%), Gaps = 5/178 (2%)

Query: 168 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
           ++   +H   +  SG++ + G   S   GH   +     P +++ L     K+V  G+ F
Sbjct: 114 ITCGSDHVLALDASGKIRSWGRGESGQLGHASFSHS-STPSIIDELASQRVKEVACGVAF 172

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           +  L   G ++T G N +GQLG GD      P+ +  +     V  +A G ++++ +T +
Sbjct: 173 SAALMEGGQLYTWGCNRYGQLGQGDRTSSAIPRMLPSMNHR-HVHLMACGAAHIVVLTTS 231

Query: 288 GVVYSFGSGSNFCLGHGEQHDE-LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             VY++G+ S   LGHG +    LQP++++     G+ + ++ AG+ H   + S G +
Sbjct: 232 RDVYTWGNNSYGQLGHGFRKKHCLQPKSVRVM--SGLDIKQIVAGENHSCVMTSFGDI 287



 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 67/138 (48%), Gaps = 7/138 (5%)

Query: 206 RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 265
           RP+ V +L G+  K +T G +    L   G + + G    GQLGH       TP  I   
Sbjct: 99  RPQEVVSLAGLSIKLITCGSDHVLALDASGKIRSWGRGESGQLGHASFSHSSTPSII--- 155

Query: 266 EEVGS--VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 323
           +E+ S  V ++A G ++  A+   G +Y++G      LG G++     PR + +   + +
Sbjct: 156 DELASQRVKEVACGVAFSAALMEGGQLYTWGCNRYGQLGQGDRTSSAIPRMLPSMNHRHV 215

Query: 324 HVVRVSAGDEHVVALDSS 341
           H+  ++ G  H+V L +S
Sbjct: 216 HL--MACGAAHIVVLTTS 231


>gi|156396924|ref|XP_001637642.1| predicted protein [Nematostella vectensis]
 gi|156224756|gb|EDO45579.1| predicted protein [Nematostella vectensis]
          Length = 1152

 Score = 90.9 bits (224), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 75/238 (31%), Positives = 119/238 (50%), Gaps = 17/238 (7%)

Query: 115 QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS---AAHVVQVSA 170
           QI  G+Y T +I  +  V +CG    G LG G  T Q     R+NF +      V     
Sbjct: 399 QIEAGQYCTFVIFPDGFVHACGKGSYGRLGLGDSTNQ-TQLKRLNFDNECLVKSVSSSKG 457

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG---VPCKQVTAGLNF 227
           S+ H   +   G+V++ GD      GH ++      P+LVE   G   V C  + AG   
Sbjct: 458 SDGHTLALTLDGKVYSWGDGDYGKLGHGNSQTQKI-PKLVEGALGNKVVCC--IAAGYRH 514

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           +  +T  G ++T G   +G+LGHGD   R  P  +   ++V +V Q+A G ++ + V+ +
Sbjct: 515 SAAVTEDGELYTWGEGDYGRLGHGDNNSRNVPVQV---KDVANVGQVACGSAHTVCVSQD 571

Query: 288 G-VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G  V+SFGSG N  LGH + +   +P+ I+    +G+ + +V  G +  +AL S+G V
Sbjct: 572 GQTVWSFGSGDNGKLGHSDTNRVYKPKVIEAL--QGMVIRKVCCGSQCSLALTSTGQV 627



 Score = 82.0 bits (201), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 74/240 (30%), Positives = 117/240 (48%), Gaps = 18/240 (7%)

Query: 106 IVETSAGNMQ---ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS 161
           +VE + GN     I  G  H+  ++ +  +++ G    G LGHG   ++ V    +    
Sbjct: 495 LVEGALGNKVVCCIAAGYRHSAAVTEDGELYTWGEGDYGRLGHGDNNSRNVP---VQVKD 551

Query: 162 AAHVVQVSASENHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            A+V QV+    H   V Q GQ    F  GDN     GH DTNR +++P+++EAL+G+  
Sbjct: 552 VANVGQVACGSAHTVCVSQDGQTVWSFGSGDNGKL--GHSDTNR-VYKPKVIEALQGMVI 608

Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
           ++V  G   +  LT  G V+  G       G  D     TPK +  L+   SVV I+ G 
Sbjct: 609 RKVCCGSQCSLALTSTGQVYVWGCGPSLGTGSVDA-TSATPKLLLALQS-HSVVDISVGD 666

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           S+ +A+T +  VY++G+ S    G G     + +P+ +      G+ V ++SAG  H VA
Sbjct: 667 SHCVALTQDNNVYAWGNNSMGQCGQGHCTTPITKPKKV--LGLDGVAVHQISAGTSHTVA 724


>gi|313236427|emb|CBY11744.1| unnamed protein product [Oikopleura dioica]
          Length = 516

 Score = 90.5 bits (223), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 64/232 (27%), Positives = 114/232 (49%), Gaps = 10/232 (4%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-AS 171
           M +T G+Y T  ++SN +V + G    G LG+G   +       I FP+    +  S  S
Sbjct: 164 MSMTAGQYCTFAVLSNGTVMANGKGSYGRLGNGASASSSSPIL-IEFPAPVRKILTSKGS 222

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           + H+  + ++GQ++T GD      GH D+      P+L+EAL          G   +  +
Sbjct: 223 DGHSIAIGKNGQIWTWGDGDYGKLGHGDSTTQK-SPKLIEALASRVIVDADCGHRHSAAV 281

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-VV 290
              GH++  G   +G+LG GD L R  P  +  + E     Q+  G ++ + ++ +G  V
Sbjct: 282 CDAGHLYMWGEGDYGRLGLGDALQRSVPVQVPDIREAS---QVVCGFNHTVVLSTDGRTV 338

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           +SFG+  N  LGHG+ + + +P+ I     +G+ + +++AG +   A+   G
Sbjct: 339 WSFGAAENGKLGHGDTNRQFRPKIIDAL--QGLTITQIAAGTQISAAVTREG 388



 Score = 85.1 bits (209), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 87/309 (28%), Positives = 141/309 (45%), Gaps = 31/309 (10%)

Query: 48  LYPQK---FRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSS 104
           LYP+    +  ++ + A Q C    +  G        ++    G++ R+     +   S 
Sbjct: 152 LYPRNLSVYGKVMSMTAGQYCTFAVLSNGT-------VMANGKGSYGRLGNGASASSSSP 204

Query: 105 DIVETSAGNMQITTGRY---HTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP 160
            ++E  A   +I T +    H++ I  N  +++ G    G LGHG  TTQ  S   I   
Sbjct: 205 ILIEFPAPVRKILTSKGSDGHSIAIGKNGQIWTWGDGDYGKLGHGDSTTQ-KSPKLIEAL 263

Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT---NRPIFRPRLVEALKGVP 217
           ++  +V       H+A V  +G ++  G+      G  D    + P+  P + EA     
Sbjct: 264 ASRVIVDADCGHRHSAAVCDAGHLYMWGEGDYGRLGLGDALQRSVPVQVPDIREA----- 318

Query: 218 CKQVTAGLNFTGFLTIRGH-VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
             QV  G N T  L+  G  V + G+  +G+LGHGDT  +  PK I  L+ + ++ QIAA
Sbjct: 319 -SQVVCGFNHTVVLSTDGRTVWSFGAAENGKLGHGDTNRQFRPKIIDALQGL-TITQIAA 376

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE-LQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G     AVT  G +Y +G G   CLG+G   +  + P+ ++     G  V+ ++ G+ HV
Sbjct: 377 GTQISAAVTREGALYVWGFGP--CLGNGSSDETFMLPKVVRGL--SGRVVIDIAVGENHV 432

Query: 336 VALDSSGYV 344
           VAL   G V
Sbjct: 433 VALTKDGLV 441



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 51/179 (28%), Positives = 84/179 (46%), Gaps = 11/179 (6%)

Query: 105 DIVETSAGNMQITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA 162
           DI E S    Q+  G  HT+++S    +V+S G++  G LGHG +T +      I+    
Sbjct: 314 DIREAS----QVVCGFNHTVVLSTDGRTVWSFGAAENGKLGHG-DTNRQFRPKIIDALQG 368

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
             + Q++A    +A V + G ++  G     C G+  ++     P++V  L G     + 
Sbjct: 369 LTITQIAAGTQISAAVTREGALYVWGFGP--CLGNGSSDETFMLPKVVRGLSGRVVIDIA 426

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSY 280
            G N    LT  G V T G+N +GQ G G  +   T P+ +  L   G + Q+ AG ++
Sbjct: 427 VGENHVVALTKDGLVFTWGNNQNGQCGTGSGMATYTSPQMVQGLHGAG-IQQVTAGTTH 484



 Score = 46.2 bits (108), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 40/164 (24%), Positives = 70/164 (42%), Gaps = 4/164 (2%)

Query: 183 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
           +VF  G NSS           +  PR +     V    +TAG   T  +   G V   G 
Sbjct: 130 EVFCWGSNSSQQLTDATPEDKLLYPRNLSVYGKV--MSMTAGQYCTFAVLSNGTVMANGK 187

Query: 243 NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
            ++G+LG+G +    +P  I     V  ++       + +A+  NG ++++G G    LG
Sbjct: 188 GSYGRLGNGASASSSSPILIEFPAPVRKILTSKGSDGHSIAIGKNGQIWTWGDGDYGKLG 247

Query: 303 HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSL 346
           HG+   +  P+ I+    + I  V    G  H  A+  +G++ +
Sbjct: 248 HGDSTTQKSPKLIEALASRVI--VDADCGHRHSAAVCDAGHLYM 289



 Score = 43.5 bits (101), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 22/64 (34%), Positives = 33/64 (51%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V+ ++  ENH   + + G VFT G+N +  CG          P++V+ L G   +QVTAG
Sbjct: 422 VIDIAVGENHVVALTKDGLVFTWGNNQNGQCGTGSGMATYTSPQMVQGLHGAGIQQVTAG 481

Query: 225 LNFT 228
              T
Sbjct: 482 TTHT 485


>gi|440792839|gb|ELR14047.1| regulator of chromosome condensation (RCC1) repeat domain
           containing protein [Acanthamoeba castellanii str. Neff]
          Length = 390

 Score = 90.5 bits (223), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 77/236 (32%), Positives = 114/236 (48%), Gaps = 13/236 (5%)

Query: 115 QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+   R H+L++ S+  V+S G    G LGHG +  + +  T I       VVQ +    
Sbjct: 157 QVCAARNHSLVVTSDGQVYSFGFPKHGRLGHGDDAYRRLP-TMIEGLRGKKVVQTTCFGA 215

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H A +  +GQVF  G  +    G  D N   F P LV AL+G   K +  G +F   + +
Sbjct: 216 HNAVLTDAGQVFMWGSGTDGKLGQGD-NESHFAPVLVRALEGKGIKSIQCGYDFAAAINV 274

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            GH+ T G    G+LGHGD  +R  P  +  L EV  +  IA G  +M A++   V+Y++
Sbjct: 275 EGHLFTWGHGLGGRLGHGDEENRTVPSLVTALAEV-PIRAIACGAGHMAAISDMNVLYTW 333

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTF--------RRKGIHVVRVSAGDEHVVALDSS 341
           G  +   LGHG++HD   P  + T           +G  V +VS G  H  +L S+
Sbjct: 334 GKNAEGQLGHGDRHDRHGPTVVATLLLAPSEDAPPRG-RVAKVSCGANHTASLVSA 388



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 66/224 (29%), Positives = 100/224 (44%), Gaps = 15/224 (6%)

Query: 126 ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN-----HAAFVLQ 180
           IS  S+   GS+  G LGHG E      +       + H   + A        H+  +  
Sbjct: 65  ISTISLGGLGST--GRLGHGDER----KYRDPTLVQSLHKQGIKAKSVVCGYFHSMVISS 118

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            GQV+TCG       GH++ N  I    LV+AL  +   QV A  N +  +T  G V++ 
Sbjct: 119 KGQVYTCGRGYKGFLGHKNQNN-IRSFLLVDALASLKVTQVCAARNHSLVVTSDGQVYSF 177

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
           G   HG+LGHGD   R  P  I  L     VVQ     ++   +T  G V+ +GSG++  
Sbjct: 178 GFPKHGRLGHGDDAYRRLPTMIEGLRGK-KVVQTTCFGAHNAVLTDAGQVFMWGSGTDGK 236

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           LG G+      P  ++    KGI  ++   G +   A++  G++
Sbjct: 237 LGQGDNESHFAPVLVRALEGKGIKSIQC--GYDFAAAINVEGHL 278


>gi|449457319|ref|XP_004146396.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Cucumis
           sativus]
          Length = 438

 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/229 (29%), Positives = 120/229 (52%), Gaps = 7/229 (3%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I+ G  H++ L+S + V S G    G LGHG +    +S T+++      +V V+   +H
Sbjct: 13  ISAGASHSVALLSGNIVCSWGRGEDGQLGHG-DAEDRLSPTQLSALDGHEIVSVTCGADH 71

Query: 175 A-AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
             A+ +   +V++ G       GH +++  +  P+ ++AL G+  +Q+  G +    +T+
Sbjct: 72  TTAYSVARTEVYSWGWGDFGRLGHGNSS-DLLTPKPIKALHGLKIRQIACGDSHCLAVTM 130

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V + G N +GQLG G T D   P+ I   E + S+  +AAG  +  AVT +G ++ +
Sbjct: 131 EGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFEGI-SIKMVAAGAEHTAAVTEDGELFGW 189

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           G G    LG G+++D L P+ + +    G  +V V+ G  H +++ S G
Sbjct: 190 GWGRYGNLGLGDRNDRLVPQKVSSV--DGDKMVMVACGWRHTISVSSLG 236



 Score = 87.4 bits (215), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 63/231 (27%), Positives = 113/231 (48%), Gaps = 7/231 (3%)

Query: 114 MQITTGRYHTLL--ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS 171
           + +T G  HT    ++ + V+S G    G LGHG  ++  ++   I       + Q++  
Sbjct: 63  VSVTCGADHTTAYSVARTEVYSWGWGDFGRLGHG-NSSDLLTPKPIKALHGLKIRQIACG 121

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           ++H   V   G+V + G N +   G   T   +  P+ ++A +G+  K V AG   T  +
Sbjct: 122 DSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDSLV-PQKIQAFEGISIKMVAAGAEHTAAV 180

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           T  G +   G   +G LG GD  DR  P+ ++ ++    +V +A G  + ++V+  G +Y
Sbjct: 181 TEDGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVDG-DKMVMVACGWRHTISVSSLGGLY 239

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           ++G      LGHG+  D L P  ++  R  G ++ ++S G  H +AL + G
Sbjct: 240 TYGWSKYGQLGHGDFEDRLVPHRLEALR--GDNISQISGGWRHTMALTTDG 288



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/179 (35%), Positives = 88/179 (49%), Gaps = 5/179 (2%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V+ +SA  +H+  +L    V + G       GH D    +  P  + AL G     VT G
Sbjct: 10  VLFISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRL-SPTQLSALDGHEIVSVTCG 68

Query: 225 LNFT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            + T  +   R  V++ G    G+LGHG++ D  TPK I  L  +  + QIA G S+ LA
Sbjct: 69  ADHTTAYSVARTEVYSWGWGDFGRLGHGNSSDLLTPKPIKALHGL-KIRQIACGDSHCLA 127

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           VT  G V S+G   N  LG G   D L P+ IQ F  +GI +  V+AG EH  A+   G
Sbjct: 128 VTMEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAF--EGISIKMVAAGAEHTAAVTEDG 184



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 97/209 (46%), Gaps = 6/209 (2%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HT  ++ +  +F  G    G LG G    + V   +++      +V V+    H
Sbjct: 170 VAAGAEHTAAVTEDGELFGWGWGRYGNLGLGDRNDRLVP-QKVSSVDGDKMVMVACGWRH 228

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V   G ++T G +     GH D    +  P  +EAL+G    Q++ G   T  LT  
Sbjct: 229 TISVSSLGGLYTYGWSKYGQLGHGDFEDRLV-PHRLEALRGDNISQISGGWRHTMALTTD 287

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
           G ++  G N  GQ+G GD +D  +P  I  P ++   V+QI+ G  + LAVT    V+S+
Sbjct: 288 GKLYGWGWNKFGQVGAGDNIDHCSPIQIKFPQDQ--KVIQISCGWRHTLAVTDKQNVFSW 345

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           G G+N  LGHGE  D   P  ++     G
Sbjct: 346 GRGTNGQLGHGESVDRNTPMILEALSVDG 374


>gi|443704114|gb|ELU01326.1| hypothetical protein CAPTEDRAFT_215877 [Capitella teleta]
          Length = 627

 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 70/237 (29%), Positives = 120/237 (50%), Gaps = 16/237 (6%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS-- 171
           Q+  G+Y T +I N  +V +CG    G LG G  + Q     +++F +   V ++S+S  
Sbjct: 393 QLEAGQYCTFVIDNDGAVSACGKGSYGRLGLGDSSNQTAP-KKLSFDATHLVKKISSSKG 451

Query: 172 -ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTG 229
            + H   +   G +F+ GD      GH + +   + P+L++  L G   K + AG   + 
Sbjct: 452 SDGHTLALTVEGALFSWGDGDYGKLGHGNISTQKY-PKLIQGPLAGKVVKCICAGYRHSA 510

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG- 288
            +T  G ++T G    G+LGHGD   R  P  +  +  VG   Q+A G S+ +AV+ +G 
Sbjct: 511 AVTEDGQLYTWGEGDFGRLGHGDNSGRNVPTLVKDISNVG---QVACGSSHTIAVSQDGR 567

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVS 345
            V++FG G    LG  + +   +P+ +  F   G+++ +V+ G    +AL SSG V+
Sbjct: 568 TVWTFGGGK---LGFEDANRVYRPKVVDAF--AGLYIRKVACGSHSSLALTSSGQVA 619



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 48/161 (29%), Positives = 73/161 (45%), Gaps = 6/161 (3%)

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           V+  G NSS       T+  I +P+LV     V  +Q+ AG   T  +   G V  CG  
Sbjct: 360 VYAWGSNSSHQLA-EGTSEKILQPKLVTNFPKV--QQLEAGQYCTFVIDNDGAVSACGKG 416

Query: 244 THGQLGHGDTLDRPTPKSIA--PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 301
           ++G+LG GD+ ++  PK ++      V  +        + LA+T  G ++S+G G    L
Sbjct: 417 SYGRLGLGDSSNQTAPKKLSFDATHLVKKISSSKGSDGHTLALTVEGALFSWGDGDYGKL 476

Query: 302 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           GHG    +  P+ IQ     G  V  + AG  H  A+   G
Sbjct: 477 GHGNISTQKYPKLIQG-PLAGKVVKCICAGYRHSAAVTEDG 516


>gi|348527836|ref|XP_003451425.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Oreochromis
           niloticus]
          Length = 4833

 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 70/232 (30%), Positives = 110/232 (47%), Gaps = 11/232 (4%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINF----PSAAHVVQVSASENH 174
           G+++  L SN  VFS G    G LGHG +TT       I       +  HVV V+    +
Sbjct: 495 GQHYLALSSNGEVFSWGCGDGGRLGHG-DTTYLEEPKMIGTFNGKQAGKHVVHVACGSTY 553

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI- 233
           +A +   G+++T G  +    GH  +      P +V A KG+    V  G      L + 
Sbjct: 554 SAAITADGELYTWGRGNYGRLGHGSSEDQT-TPMVVTAFKGLKVVDVACGSGDAQTLAVT 612

Query: 234 -RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G V + G   +G+LG G +    TPK +  L+++  +V++  G  + +A+T +G VY+
Sbjct: 613 ENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDL-DIVKVCCGSQFSVALTKDGQVYT 671

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           +G G N  LGHG       P+ + +   +G  VV V+ G  H +AL   G V
Sbjct: 672 WGKGDNQRLGHGTDEHVRYPKLLDSL--QGKKVVDVAVGSTHCLALTDDGEV 721



 Score = 88.6 bits (218), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 73/235 (31%), Positives = 111/235 (47%), Gaps = 8/235 (3%)

Query: 113  NMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS 171
             + + +G  H L L S   V+S G +  G LGHG   + C     I       VV ++A 
Sbjct: 4040 KVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGVEVVDIAAG 4098

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTG 229
              H+A +  SG++FT G       GH D+   + +P+LV+AL+G     V   +G   T 
Sbjct: 4099 GAHSACITASGELFTWGKGRYGRLGHGDSEDQL-KPKLVDALQGHRVIDVACGSGDAQTL 4157

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             LT    V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G 
Sbjct: 4158 CLTDDDMVWSWGDGDYGKLGRGGSDGCKIPMKIDSLTGLG-VVKVECGSQFSVALTKSGA 4216

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            VY++G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G V
Sbjct: 4217 VYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEV 4269



 Score = 88.2 bits (217), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 72/228 (31%), Positives = 106/228 (46%), Gaps = 7/228 (3%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+   L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3053 GRHAMALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAI 3111

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG++++ G       GH D N    RP+LV+ L G    QV  G     T  LT  G 
Sbjct: 3112 TSSGELYSWGLGEYGRLGHGD-NTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGF 3170

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3171 VFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3229

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G V
Sbjct: 3230 DYFRLGHGTDVHVRKPQMVEGLR--GKKIVHVAVGALHCLAVTDTGQV 3275



 Score = 75.5 bits (184), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 57/188 (30%), Positives = 94/188 (50%), Gaps = 7/188 (3%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
            SA +VVQV+        V   G+++ CG+ ++   G   ++  I  PR + AL     K+
Sbjct: 2987 SALNVVQVAGGSKSLFAVTVEGKIYACGEATNGRLGLGLSSGTIPIPRQITALSNYVIKK 3046

Query: 221  VT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
            V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA G 
Sbjct: 3047 VAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIACGS 3105

Query: 279  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVV 336
            S+  A+T +G +YS+G G    LGHG+   +L+P+ ++     G  V++V+ G  D   +
Sbjct: 3106 SHSAAITSSGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLL--GHRVIQVACGSRDAQTL 3163

Query: 337  ALDSSGYV 344
            AL   G+V
Sbjct: 3164 ALTDEGFV 3171



 Score = 68.2 bits (165), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  I++S  ++S G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3101 IACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQ-LRPKLVKVLLGHRVIQVACGSRD 3159

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3160 AQTLALTDEGFVFSWGDGDFGKLG-RGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALT 3218

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 3219 KSGVVWTWGKGDYFRLGHGTDVHVRKPQMVEGLRG-KKIVHVAVGALHCLAVTDTGQVYA 3277

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3278 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3320



 Score = 67.4 bits (163), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 56/191 (29%), Positives = 88/191 (46%), Gaps = 20/191 (10%)

Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
           S+  V Q+  SE     +  SG V++    S+              P L+  L      +
Sbjct: 440 SSLGVTQIVCSEKGFLILSSSGAVYSQNYKST-----------TLAPMLIHVLSSRKIVK 488

Query: 221 VTAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIA 275
           + A  +   +L +   G V + G    G+LGHGDT     PK I     ++ G  VV +A
Sbjct: 489 LAAHPDGQHYLALSSNGEVFSWGCGDGGRLGHGDTTYLEEPKMIGTFNGKQAGKHVVHVA 548

Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDE 333
            G +Y  A+T +G +Y++G G+   LGHG   D+  P  +  F  KG+ VV V+  +GD 
Sbjct: 549 CGSTYSAAITADGELYTWGRGNYGRLGHGSSEDQTTPMVVTAF--KGLKVVDVACGSGDA 606

Query: 334 HVVALDSSGYV 344
             +A+  +G V
Sbjct: 607 QTLAVTENGQV 617



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 78/162 (48%), Gaps = 5/162 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G ++ CG 
Sbjct: 2957 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKIYACGE 3015

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  + +A+T +G V+S+G G +  
Sbjct: 3016 ATNGRLGLGLSSGTIPIPRQITALSNYVIKKVAVHSGGRHAMALTVDGKVFSWGEGDDGK 3075

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            LGH  + +  +PR I+  + K I    ++ G  H  A+ SSG
Sbjct: 3076 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAAITSSG 3115



 Score = 54.7 bits (130), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 49/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122  HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 3161 QTLALTDEGFVFSWGDGDFGKLGRG-GSEGCNVPQNIERLNGQGVCQIECGAQFSLALTK 3219

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SG V+T G    F  GH  T+  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 3220 SGVVWTWGKGDYFRLGH-GTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQVYAW 3278

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 3279 GDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 3322



 Score = 54.7 bits (130), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 75/167 (44%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  +  V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4151 SGDAQTLCLTDDDMVWSWGDGDYGKLGRG-GSDGCKIPMKIDSLTGLGVVKVECGSQFSV 4209

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4210 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4268

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    + ++A G ++ LA
Sbjct: 4269 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKINRVACGSAHTLA 4314



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 60/230 (26%), Positives = 103/230 (44%), Gaps = 23/230 (10%)

Query: 81  ELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQIT-----TGRYHTLLIS-NSSVFSC 134
           EL     GN+ R L    S + ++ +V T+   +++      +G   TL ++ N  V+S 
Sbjct: 562 ELYTWGRGNYGR-LGHGSSEDQTTPMVVTAFKGLKVVDVACGSGDAQTLAVTENGQVWSW 620

Query: 135 GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFC 194
           G    G LG G  +  C +   +       +V+V      +  + + GQV+T G   +  
Sbjct: 621 GDGDYGKLGRG-GSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQR 679

Query: 195 CGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTL 254
            GH  T+  +  P+L+++L+G     V  G      LT  G V + GSN   +L H DTL
Sbjct: 680 LGH-GTDEHVRYPKLLDSLQGKKVVDVAVGSTHCLALTDDGEVLSWGSND--KLQHFDTL 736

Query: 255 --DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
             ++  PK++  L     +V I+ GP         G  +++ S S + +G
Sbjct: 737 FSNKKQPKALPGLNS-KHIVGISCGP---------GQSFAWSSSSEWSVG 776



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 67/137 (48%), Gaps = 3/137 (2%)

Query: 207  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            P   EAL  +   Q+  G      +T  G ++  G    G+LG G T    TP  +  ++
Sbjct: 3975 PTSTEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQ 4034

Query: 267  EVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
             V    V + +G  + LA++  G VYS+G   +  LGHG +    +PR I++ R  G+ V
Sbjct: 4035 HVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLR--GVEV 4092

Query: 326  VRVSAGDEHVVALDSSG 342
            V ++AG  H   + +SG
Sbjct: 4093 VDIAAGGAHSACITASG 4109



 Score = 38.1 bits (87), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 52/110 (47%), Gaps = 1/110 (0%)

Query: 235  GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
            G ++  G N  GQLG  +      P S   L  +   VQ+  G   + AVT +G +Y+ G
Sbjct: 3951 GTIYGWGHNHRGQLGGIEGAKVKVPTSTEALATL-RPVQLIGGEQTLFAVTADGKLYATG 4009

Query: 295  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             G+   LG G       P  +++ +   I  V V++G +H +AL S G V
Sbjct: 4010 YGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEV 4059


>gi|351699519|gb|EHB02438.1| Putative E3 ubiquitin-protein ligase HERC2 [Heterocephalus glaber]
          Length = 4833

 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 74/228 (32%), Positives = 108/228 (47%), Gaps = 7/228 (3%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I    A  +  ++   +H+A +
Sbjct: 3059 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALRAKRIRDIACGSSHSAAL 3117

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3118 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3176

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3177 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3235

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG V
Sbjct: 3236 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQV 3281



 Score = 88.2 bits (217), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 70/237 (29%), Positives = 108/237 (45%), Gaps = 17/237 (7%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 169
           + G ++  L +   VFS G    G LGHG       P+     S  +       HVV ++
Sbjct: 503 SDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----GGKHVVHIA 558

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G     
Sbjct: 559 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQ 617

Query: 230 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
            L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-EVVKVRCGSQFSVALTKD 676

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G VYS+G G N  LGHG +     PR ++     G  V+ V+AG  H +AL     V
Sbjct: 677 GQVYSWGKGDNQRLGHGTEEHVRYPRLLEGLH--GKKVIDVAAGSTHCLALTEDSEV 731



 Score = 85.5 bits (210), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 72/235 (30%), Positives = 109/235 (46%), Gaps = 8/235 (3%)

Query: 113  NMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS 171
             + + +G  H L L S   V+S G +  G LGHG  +  C     +       VV V+A 
Sbjct: 4045 KVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSP-CDRPRVVESLRGIEVVDVAAG 4103

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTG 229
              H+A V  +G ++T G       GH D+   + +P+LVE L+G     V   +G   T 
Sbjct: 4104 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEVLQGHRVVDVACGSGDAQTL 4162

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             LT    V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G 
Sbjct: 4163 CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIESLTGLG-VVKVECGSQFSVALTKSGA 4221

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            VY++G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G V
Sbjct: 4222 VYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEV 4274



 Score = 79.0 bits (193), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 68/221 (30%), Positives = 110/221 (49%), Gaps = 12/221 (5%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFT 186
             V++CG +  G LG G  ++  V   R     +++VV+   V +   HA  +   G+VF+
Sbjct: 3015 KVYACGEATNGRLGLG-LSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3073

Query: 187  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
             G+      GH  +     +PRL+EAL+    + +  G + +  LT  G ++T G   +G
Sbjct: 3074 WGEGDDGKLGHF-SRMNCDKPRLIEALRAKRIRDIACGSSHSAALTSSGELYTWGLGEYG 3132

Query: 247  QLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGH 303
            +LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG 
Sbjct: 3133 RLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGR 3190

Query: 304  GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            G       P+ I+  R  G  V ++  G +  +AL  SG V
Sbjct: 3191 GGSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVV 3229



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 90/190 (47%), Gaps = 11/190 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2993 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPI--PRQITALSSYVV 3050

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L     +  IA 
Sbjct: 3051 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL-RAKRIRDIAC 3109

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3110 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3167

Query: 335  VVALDSSGYV 344
             +AL   G V
Sbjct: 3168 TLALTDEGLV 3177



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/187 (31%), Positives = 93/187 (49%), Gaps = 20/187 (10%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 502

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V + G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 503 SDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQGGKHVVHIACGST 562

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 620

Query: 338 LDSSGYV 344
           +  +G V
Sbjct: 621 VTENGQV 627



 Score = 67.8 bits (164), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3107 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3165

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3166 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3224

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3225 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3283

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3284 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3326



 Score = 64.7 bits (156), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 52/162 (32%), Positives = 77/162 (47%), Gaps = 5/162 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2963 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3021

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3022 ATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3081

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            LGH  + +  +PR I+  R K I    ++ G  H  AL SSG
Sbjct: 3082 LGHFSRMNCDKPRLIEALRAKRIR--DIACGSSHSAALTSSG 3121



 Score = 57.8 bits (138), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 81/177 (45%), Gaps = 5/177 (2%)

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA--FV 178
           Y   + +   +++ G    G LGHG    + +            V+ V+     A    V
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAV 621

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
            ++GQV++ GD      G R  +     P+L+E L+ +   +V  G  F+  LT  G V+
Sbjct: 622 TENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLEVVKVRCGSQFSVALTKDGQVY 680

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
           + G   + +LGHG       P+ +  L     V+ +AAG ++ LA+T +  V+S+GS
Sbjct: 681 SWGKGDNQRLGHGTEEHVRYPRLLEGLHG-KKVIDVAAGSTHCLALTEDSEVHSWGS 736



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 53/169 (31%), Positives = 75/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLEVVKVRCGSQFSV 671

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  PRL+E L G     V AG      LT    
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPRLLEGLHGKKVIDVAAGSTHCLALTEDSE 730

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 731 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 776



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 75/167 (44%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I   +   VV+V      + 
Sbjct: 4156 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIESLTGLGVVKVECGSQFSV 4214

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4215 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4273

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4274 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4319



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122  HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 3167 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 3225

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SG V+T G    F  GH  ++  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 3226 SGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3284

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 3285 GDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 3328



 Score = 44.7 bits (104), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 66/137 (48%), Gaps = 3/137 (2%)

Query: 207  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            P   EAL  +   Q+  G      +T  G ++  G    G+LG G T     P  +  ++
Sbjct: 3980 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSAPTLLESIQ 4039

Query: 267  EVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
             V    V + +G  + LA++  G VYS+G   +  LGHG +    +PR +++ R  GI V
Sbjct: 4040 HVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSPCDRPRVVESLR--GIEV 4097

Query: 326  VRVSAGDEHVVALDSSG 342
            V V+AG  H   + ++G
Sbjct: 4098 VDVAAGGAHSACVTAAG 4114



 Score = 41.2 bits (95), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 7/113 (6%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3956 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4011

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G V
Sbjct: 4012 ATGYGAGGRLGIGGTESVSAPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEV 4064


>gi|302803759|ref|XP_002983632.1| hypothetical protein SELMODRAFT_180358 [Selaginella moellendorffii]
 gi|300148469|gb|EFJ15128.1| hypothetical protein SELMODRAFT_180358 [Selaginella moellendorffii]
          Length = 863

 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 58/177 (32%), Positives = 94/177 (53%), Gaps = 7/177 (3%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++    H A V + G+VF+ G+ S    GH   +  +  P+L+++L     + V  G
Sbjct: 125 VQQIACGVRHTALVTRQGEVFSWGEESGGRLGH-GVDADVAHPQLIDSLASSTVQYVACG 183

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYM 281
              +  +T  G ++T G  TH  G LGHG+++   TPK +  PLE V  V  +A GP + 
Sbjct: 184 EYHSCAVTQSGDLYTWGDGTHNFGLLGHGNSISHWTPKRVGGPLEGV-RVSSVACGPWHT 242

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           + VT  G ++SFG G+   LGHG++     PR +++   KG+  +R + G  H  A+
Sbjct: 243 VLVTSTGQLFSFGDGTFGVLGHGDRKSASMPREVESL--KGLKTLRAACGPWHTAAV 297



 Score = 80.9 bits (198), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 113/238 (47%), Gaps = 24/238 (10%)

Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPS-----A 162
           +  G +HT+L+ S   +FS G    GVLGHG       P   + +   +    +      
Sbjct: 235 VACGPWHTVLVTSTGQLFSFGDGTFGVLGHGDRKSASMPREVESLKGLKTLRAACGPWHT 294

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           A VV+V +  ++A   L SG++FT GD      GH D  + +  P  V AL     +QV 
Sbjct: 295 AAVVEVMSRYSNAGSSL-SGKLFTWGDGDKNRLGHGDKEQKLV-PTCVAALVDHNFRQVA 352

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV--QIAAGPSY 280
            G + T  LT  GH++T GS ++GQLG      R     +  +  +G  +  +++ G  +
Sbjct: 353 CGHSLTVALTTTGHLYTMGSVSYGQLGDPQATGR-----LPGVLRLGRTLIEEVSCGAYH 407

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           + A+T  G V ++G G+N  LGHG+  D   P  ++  R K   V +VS G     A+
Sbjct: 408 VAALTSKGDVCTWGKGANGRLGHGDAEDRDVPTLVEALRDK--QVKKVSCGSSFTSAI 463



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 71/247 (28%), Positives = 113/247 (45%), Gaps = 21/247 (8%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSAS 171
            QI  G  HT L++    VFS G    G LGHG +    V+  ++    A+  VQ V+  
Sbjct: 126 QQIACGVRHTALVTRQGEVFSWGEESGGRLGHGVDAD--VAHPQLIDSLASSTVQYVACG 183

Query: 172 ENHAAFVLQSGQVFTCGDNS-SF-CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
           E H+  V QSG ++T GD + +F   GH ++       R+   L+GV    V  G   T 
Sbjct: 184 EYHSCAVTQSGDLYTWGDGTHNFGLLGHGNSISHWTPKRVGGPLEGVRVSSVACGPWHTV 243

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG--- 286
            +T  G + + G  T G LGHGD      P+ +  L+ +   ++ A GP +  AV     
Sbjct: 244 LVTSTGQLFSFGDGTFGVLGHGDRKSASMPREVESLKGL-KTLRAACGPWHTAAVVEVMS 302

Query: 287 ---------NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
                    +G ++++G G    LGHG++  +L P  +           +V+ G    VA
Sbjct: 303 RYSNAGSSLSGKLFTWGDGDKNRLGHGDKEQKLVPTCVAALVDHNFR--QVACGHSLTVA 360

Query: 338 LDSSGYV 344
           L ++G++
Sbjct: 361 LTTTGHL 367



 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 48/143 (33%), Positives = 74/143 (51%), Gaps = 6/143 (4%)

Query: 205 FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
           F PR V +L  +  +Q+  G+  T  +T +G V + G  + G+LGHG   D   P+ I  
Sbjct: 112 FLPRAVRSLVVLDVQQIACGVRHTALVTRQGEVFSWGEESGGRLGHGVDADVAHPQLIDS 171

Query: 265 LEEVGSVVQ-IAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPRAIQTFRRK 321
           L    S VQ +A G  +  AVT +G +Y++G G+ NF  LGHG       P+ +     +
Sbjct: 172 L--ASSTVQYVACGEYHSCAVTQSGDLYTWGDGTHNFGLLGHGNSISHWTPKRVGG-PLE 228

Query: 322 GIHVVRVSAGDEHVVALDSSGYV 344
           G+ V  V+ G  H V + S+G +
Sbjct: 229 GVRVSSVACGPWHTVLVTSTGQL 251


>gi|427780149|gb|JAA55526.1| Putative hect e3 ubiquitin ligase culex quinquefasciatus hect e3
           ubiquitin ligase [Rhipicephalus pulchellus]
          Length = 1175

 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 72/224 (32%), Positives = 109/224 (48%), Gaps = 5/224 (2%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  H+L +S++  VFS G +  G LG G E    +    I   +  H+VQ++    H
Sbjct: 140 VACGEAHSLALSDAGQVFSWGCNRNGQLGCGTEEESRLRPKVIKKLATLHIVQIACGAVH 199

Query: 175 AAFVLQSGQVFTCGDNSSFCCG-HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
              +  +G++F+ G N+S   G  RD+      PR V  L GVP   V  G   +  LT 
Sbjct: 200 CLALANNGELFSWGGNASGQLGLGRDSTGNERLPRRVSHLVGVPLALVACGAMHSVGLTP 259

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V   G N+ GQLG  D  DR  P  + PL     +  +  G ++  A+T +G V++F
Sbjct: 260 SGTVFVWGRNSCGQLGLSDQRDRLHPTVLKPLRS-QRIKHVCCGENHTAALTADGGVFTF 318

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           G+G+   LGHG + +E  PR +      G  + ++S G  H VA
Sbjct: 319 GAGTYGQLGHGVKVNEAVPRRVVELM--GTAISQLSCGRCHTVA 360



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/235 (28%), Positives = 112/235 (47%), Gaps = 13/235 (5%)

Query: 115 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           ++  G  HTL L++N SV+SCG++  G LG      +     ++   SA  +  V+  E 
Sbjct: 89  EVACGHKHTLVLLANGSVYSCGANDFGQLGQDRSMRK---LEQVAALSAHEIRAVACGEA 145

Query: 174 HAAFVLQSGQVFT--CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           H+  +  +GQVF+  C  N    CG  + +R   RP++++ L  +   Q+  G      L
Sbjct: 146 HSLALSDAGQVFSWGCNRNGQLGCGTEEESR--LRPKVIKKLATLHIVQIACGAVHCLAL 203

Query: 232 TIRGHVHTCGSNTHGQLGHG--DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
              G + + G N  GQLG G   T +   P+ ++ L  V  +  +A G  + + +T +G 
Sbjct: 204 ANNGELFSWGGNASGQLGLGRDSTGNERLPRRVSHLVGV-PLALVACGAMHSVGLTPSGT 262

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           V+ +G  S   LG  +Q D L P  ++  R + I    V  G+ H  AL + G V
Sbjct: 263 VFVWGRNSCGQLGLSDQRDRLHPTVLKPLRSQRIK--HVCCGENHTAALTADGGV 315



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 62/195 (31%), Positives = 96/195 (49%), Gaps = 7/195 (3%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           +QI  G  H L L +N  +FS G +  G LG G ++T      R ++      +  V+  
Sbjct: 191 VQIACGAVHCLALANNGELFSWGGNASGQLGLGRDSTGNERLPRRVSHLVGVPLALVACG 250

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H+  +  SG VF  G NS    G  D  R    P +++ L+    K V  G N T  L
Sbjct: 251 AMHSVGLTPSGTVFVWGRNSCGQLGLSD-QRDRLHPTVLKPLRSQRIKHVCCGENHTAAL 309

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGV 289
           T  G V T G+ T+GQLGHG  ++   P+ +  +E +G+ + Q++ G  + +A    +G 
Sbjct: 310 TADGGVFTFGAGTYGQLGHGVKVNEAVPRRV--VELMGTAISQLSCGRCHTVAYAPQSGR 367

Query: 290 VYSFGSGSNFCLGHG 304
           +Y FG G +  LG+G
Sbjct: 368 LYIFGLGMSGQLGNG 382



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 77/150 (51%), Gaps = 16/150 (10%)

Query: 199 DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT 258
           DT  P+ +P  V        ++V  G   T  L   G V++CG+N  GQLG         
Sbjct: 68  DTETPVSQPERVRRFGTRAVREVACGHKHTLVLLANGSVYSCGANDFGQLGQD------- 120

Query: 259 PKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQP 312
            +S+  LE+V +     +  +A G ++ LA++  G V+S+G   N  LG G E+   L+P
Sbjct: 121 -RSMRKLEQVAALSAHEIRAVACGEAHSLALSDAGQVFSWGCNRNGQLGCGTEEESRLRP 179

Query: 313 RAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           + I+  +   +H+V+++ G  H +AL ++G
Sbjct: 180 KVIK--KLATLHIVQIACGAVHCLALANNG 207


>gi|351698259|gb|EHB01178.1| Putative E3 ubiquitin-protein ligase HERC1, partial [Heterocephalus
            glaber]
          Length = 3493

 Score = 90.1 bits (222), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 73/241 (30%), Positives = 123/241 (51%), Gaps = 15/241 (6%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 2656 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 2714

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 2715 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 2773

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQ----IAAGPSYMLAV 284
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G        +A G ++ LAV
Sbjct: 2774 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQAWNKSYSVACGLNHTLAV 2833

Query: 285  TGNG-VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            + +G +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+
Sbjct: 2834 STDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGH 2891

Query: 344  V 344
            V
Sbjct: 2892 V 2892



 Score = 77.4 bits (189), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 69/232 (29%), Positives = 110/232 (47%), Gaps = 14/232 (6%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       VVQ+S    H+A V  
Sbjct: 2718 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTS 2776

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ-------VTAGLNFTGFLTI 233
             G++FT G+      G  +T+     P  V AL+G    Q       V  GLN T  ++ 
Sbjct: 2777 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQAWNKSYSVACGLNHTLAVST 2835

Query: 234  RGH-VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G  V   G   +G+LG G++  + +P+ +  L  +G + ++A G  + +A+T +G VY+
Sbjct: 2836 DGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVALTKDGHVYT 2894

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            FG      L  G   +  +P+ +      G+ +  V+ G EH +AL S+G V
Sbjct: 2895 FGQDRLIGLPEGRARNHNRPQQVPVL--AGVVIEDVAVGAEHTLALASTGDV 2944



 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 65/128 (50%), Gaps = 4/128 (3%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 2655 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 2714

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H  
Sbjct: 2715 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 2772

Query: 337  ALDSSGYV 344
             + S G +
Sbjct: 2773 VVTSDGKL 2780



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 103/236 (43%), Gaps = 20/236 (8%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 165
            +Q++ G  H+ ++ S+  +F+ G+   G LG G       PE    +   +I   +    
Sbjct: 2762 VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG-QAWNKS 2820

Query: 166  VQVSASENHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
              V+   NH   V   G +   F  GD      G+         P+ V+ L G+  K+V 
Sbjct: 2821 YSVACGLNHTLAVSTDGSMVWAFGDGDYGKLGLGNSTAKS---SPQKVDVLCGIGIKKVA 2877

Query: 223  AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYM 281
             G  F+  LT  GHV+T G +    L  G   +   P+ +  L   G V++ +A G  + 
Sbjct: 2878 CGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPVL--AGVVIEDVAVGAEHT 2935

Query: 282  LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            LA+   G VY++GS S   LG G  +   +P  +   + K I   ++SAG  H  A
Sbjct: 2936 LALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIR--QISAGRCHSAA 2989



 Score = 47.0 bits (110), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 51/179 (28%), Positives = 78/179 (43%), Gaps = 11/179 (6%)

Query: 116  ITTGRYHTLLISN--SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
            +  G  HTL +S   S V++ G    G LG G  T +  S  +++      + +V+    
Sbjct: 2823 VACGLNHTLAVSTDGSMVWAFGDGDYGKLGLGNSTAKS-SPQKVDVLCGIGIKKVACGTQ 2881

Query: 174  HAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
             +  + + G V+T G +          R+ NRP    + V  L GV  + V  G   T  
Sbjct: 2882 FSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQVPVLAGVVIEDVAVGAEHTLA 2937

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
            L   G V+  GSN+ GQLG G T     P  +  L+   ++ QI+AG  +  A T   V
Sbjct: 2938 LASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQG-KNIRQISAGRCHSAAWTAPPV 2995


>gi|387541824|gb|AFJ71539.1| E3 ISG15--protein ligase HERC5 [Macaca mulatta]
          Length = 1023

 Score = 90.1 bits (222), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 70/208 (33%), Positives = 106/208 (50%), Gaps = 10/208 (4%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QIT G YH+L +S    +F+ G +L G LG G       +   +   +   + Q+SA E
Sbjct: 140 IQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRTFPSTTTPQIVEHLAGVPLAQISAGE 199

Query: 173 NHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            H+  +  SG +++ G N       GH ++      P L+EAL     + +  G + +  
Sbjct: 200 AHSMALSMSGNIYSWGKNEFGQLGLGHTESKD---SPSLIEALDNQKVEFLACGGSHSAL 256

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGNG 288
           LT  G + T G+  HGQLGH  T +   P  +A L  VG+ V QIA G  + LA V+  G
Sbjct: 257 LTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAEL--VGNRVTQIACGRWHTLAYVSDFG 314

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
            V+SFGSG +  LG+G   D+L P  ++
Sbjct: 315 KVFSFGSGKDGQLGNGGTLDQLIPLPVK 342



 Score = 80.9 bits (198), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 51/173 (29%), Positives = 92/173 (53%), Gaps = 3/173 (1%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           ++Q++  + H+  + + G++F  G N     G   T      P++VE L GVP  Q++AG
Sbjct: 139 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRTFPSTTTPQIVEHLAGVPLAQISAG 198

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
              +  L++ G++++ G N  GQLG G T  + +P  I  L+    V  +A G S+   +
Sbjct: 199 EAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDSPSLIEALDN-QKVEFLACGGSHSALL 257

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           T +G++++FG+G +  LGH    +EL+P  +      G  V +++ G  H +A
Sbjct: 258 TQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELV--GNRVTQIACGRWHTLA 308



 Score = 46.6 bits (109), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 60/128 (46%), Gaps = 8/128 (6%)

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGP 278
           Q+T G   +  L+  G +   G N HGQLG G T     TP+ +  L  V  + QI+AG 
Sbjct: 141 QITCGDYHSLALSKGGELFAWGQNLHGQLGVGRTFPSTTTPQIVEHLAGV-PLAQISAGE 199

Query: 279 SYMLAVTGNGVVYSFGSGS--NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
           ++ +A++ +G +YS+G        LGH E  D   P  I+    + +    ++ G  H  
Sbjct: 200 AHSMALSMSGNIYSWGKNEFGQLGLGHTESKD--SPSLIEALDNQKVEF--LACGGSHSA 255

Query: 337 ALDSSGYV 344
            L   G +
Sbjct: 256 LLTQDGLL 263


>gi|196012194|ref|XP_002115960.1| hypothetical protein TRIADDRAFT_59918 [Trichoplax adhaerens]
 gi|190581736|gb|EDV21812.1| hypothetical protein TRIADDRAFT_59918 [Trichoplax adhaerens]
          Length = 897

 Score = 90.1 bits (222), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 110/217 (50%), Gaps = 11/217 (5%)

Query: 131 VFSCGSSLCGVLGHGPETTQCV-SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 189
           +F+ G ++ G LG G     C+   T ++  +   +  +S   NH   +LQ GQ+++CG 
Sbjct: 1   MFAWGKAIEGQLGLGGIDENCILKATHVDLTTNHTIKLISCGLNHTILLLQDGQIYSCGS 60

Query: 190 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA-GLNFTGFLTIRGHVHTCGSNTHGQL 248
           N     G +  N+   R   ++A + +    V++ G N    +  +  ++  G N+ GQL
Sbjct: 61  NDYGQTGRQRNNKRFAR---IDAFESMRITNVSSNGANHNLAINDKNCIYAWGDNSDGQL 117

Query: 249 GHGDTLDRP---TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
           G  D   +    TP+ I  L +  +VVQ+A G S+ LAV  +G V+S+GS     LG   
Sbjct: 118 GVTDQNLKQFYRTPRQIKSLSKF-AVVQVACGQSHSLAVINDGTVFSWGSNRYGQLGIDS 176

Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
               ++P+  Q  +  G ++V+++AG  H +A+ +SG
Sbjct: 177 NVSSVEPK--QILKLSGFYIVQIAAGGAHSLAITNSG 211



 Score = 87.8 bits (216), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 69/231 (29%), Positives = 110/231 (47%), Gaps = 10/231 (4%)

Query: 116 ITTGRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS-EN 173
           I+ G  HT LL+ +  ++SCGS+  G  G      +   F RI+   +  +  VS++  N
Sbjct: 39  ISCGLNHTILLLQDGQIYSCGSNDYGQTGRQRNNKR---FARIDAFESMRITNVSSNGAN 95

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTN-RPIFR-PRLVEALKGVPCKQVTAGLNFTGFL 231
           H   +     ++  GDNS    G  D N +  +R PR +++L      QV  G + +  +
Sbjct: 96  HNLAINDKNCIYAWGDNSDGQLGVTDQNLKQFYRTPRQIKSLSKFAVVQVACGQSHSLAV 155

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
              G V + GSN +GQLG    +    PK I  L     +VQIAAG ++ LA+T +G + 
Sbjct: 156 INDGTVFSWGSNRYGQLGIDSNVSSVEPKQILKLSGF-YIVQIAAGGAHSLAITNSGALL 214

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           ++G  S   LG G     L P  + + R +  H+   + G++H   L   G
Sbjct: 215 TWGKNSFGQLGLGTNDGVLSPTCVSSLRSQ--HIAYAACGEDHTAVLTKEG 263



 Score = 64.7 bits (156), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 106/234 (45%), Gaps = 11/234 (4%)

Query: 114 MQITT----GRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFT--RINFPSAAHVV 166
           M+IT     G  H L I++ + +++ G +  G LG   +  +    T  +I   S   VV
Sbjct: 84  MRITNVSSNGANHNLAINDKNCIYAWGDNSDGQLGVTDQNLKQFYRTPRQIKSLSKFAVV 143

Query: 167 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
           QV+  ++H+  V+  G VF+ G N     G  D+N     P+ +  L G    Q+ AG  
Sbjct: 144 QVACGQSHSLAVINDGTVFSWGSNRYGQLG-IDSNVSSVEPKQILKLSGFYIVQIAAGGA 202

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
            +  +T  G + T G N+ GQLG G      +P  ++ L     +   A G  +   +T 
Sbjct: 203 HSLAITNSGALLTWGKNSFGQLGLGTNDGVLSPTCVSSLRS-QHIAYAACGEDHTAVLTK 261

Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            G V++FG+GS+  LGH        P+ +      GI V +++ G  + +  D 
Sbjct: 262 EGGVFTFGAGSSGQLGHNSLSHHCSPQMVVDLM--GIVVTQITCGRFYALQQDE 313


>gi|260814720|ref|XP_002602062.1| hypothetical protein BRAFLDRAFT_94436 [Branchiostoma floridae]
 gi|229287367|gb|EEN58074.1| hypothetical protein BRAFLDRAFT_94436 [Branchiostoma floridae]
          Length = 3971

 Score = 90.1 bits (222), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 73/235 (31%), Positives = 118/235 (50%), Gaps = 10/235 (4%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG--PETTQCVSFTRINFPSAAHVVQVSAS 171
            QI  G+  T +I +N +V +CG    G LG G   +  Q    + +       +V    S
Sbjct: 3217 QIICGQNCTFVIQANGTVQACGEGSYGRLGQGNSDDLHQLTIISALQGFVVTQLVTSCGS 3276

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
            + H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q+  G   +  +
Sbjct: 3277 DGHSMALTESGEVFSWGDGDYGKLGHGNSDR-QRRPRQIEALQGEEIIQMACGFKHSAVV 3335

Query: 232  TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLAVTGNG-V 289
            +  G + T G+  +G+LG G+T ++  P+ +  LE  G +V Q+  G ++ LAV+ +G  
Sbjct: 3336 SADGKLFTFGNGDYGRLGLGNTSNKKIPERVTALE--GQMVGQVGCGLNHTLAVSADGNT 3393

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            V+SFG G    LG G    +  P+ +      GI V +V  G +  VAL   G V
Sbjct: 3394 VWSFGDGDYGKLGLGNSTAKSTPQRVDPL--CGIGVKKVCCGTQFSVALTKDGRV 3446



 Score = 78.2 bits (191), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 70/226 (30%), Positives = 110/226 (48%), Gaps = 9/226 (3%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       ++Q++    H+A V  
Sbjct: 3279 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEIIQMACGFKHSAVVSA 3337

Query: 181  SGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VH 238
             G++FT G+      G  +T N+ I  P  V AL+G    QV  GLN T  ++  G+ V 
Sbjct: 3338 DGKLFTFGNGDYGRLGLGNTSNKKI--PERVTALEGQMVGQVGCGLNHTLAVSADGNTVW 3395

Query: 239  TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            + G   +G+LG G++  + TP+ + PL  +G V ++  G  + +A+T +G V++FG    
Sbjct: 3396 SFGDGDYGKLGLGNSTAKSTPQRVDPLCGIG-VKKVCCGTQFSVALTKDGRVFTFGQ--E 3452

Query: 299  FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              +G  E       R  Q    +   V  V  G EH +AL S+G V
Sbjct: 3453 RLIGQPESRSRNHNRPQQVPALEAFFVEDVVVGAEHSLALTSTGEV 3498



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/148 (25%), Positives = 72/148 (48%), Gaps = 6/148 (4%)

Query: 199  DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT 258
            +T R +  P +  +      +Q+  G N T  +   G V  CG  ++G+LG G++ D   
Sbjct: 3198 ETGRSLLTPTVTPSFSQA--QQIICGQNCTFVIQANGTVQACGEGSYGRLGQGNSDDLHQ 3255

Query: 259  PKSIAPLEE--VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
               I+ L+   V  +V       + +A+T +G V+S+G G    LGHG    + +PR I+
Sbjct: 3256 LTIISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIE 3315

Query: 317  TFRRKGIHVVRVSAGDEHVVALDSSGYV 344
                +G  +++++ G +H   + + G +
Sbjct: 3316 AL--QGEEIIQMACGFKHSAVVSADGKL 3341



 Score = 54.7 bits (130), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 68/252 (26%), Positives = 103/252 (40%), Gaps = 27/252 (10%)

Query: 87   NGNWKRVLRFLQSVEHSSDIVETSAGNM--QITTGRYHTLLIS--NSSVFSCGSSLCGVL 142
            NG++ R+     S +   + V    G M  Q+  G  HTL +S   ++V+S G    G L
Sbjct: 3346 NGDYGRLGLGNTSNKKIPERVTALEGQMVGQVGCGLNHTLAVSADGNTVWSFGDGDYGKL 3405

Query: 143  GHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR 202
            G G  T +     R++      V +V      +  + + G+VFT G            +R
Sbjct: 3406 GLGNSTAKSTP-QRVDPLCGIGVKKVCCGTQFSVALTKDGRVFTFG-QERLIGQPESRSR 3463

Query: 203  PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
               RP+ V AL+    + V  G   +  LT  G V   GSN  GQLG GDT  R      
Sbjct: 3464 NHNRPQQVPALEAFFVEDVVVGAEHSLALTSTGEVWAWGSNGDGQLGIGDTNAR------ 3517

Query: 263  APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
                           P  + A+ G  V   +GS  +  LG G+ +   +P  +     +G
Sbjct: 3518 -------------REPCLVTALQGKNVRQVWGSNGDGQLGIGDTNARREPCLVTDL--QG 3562

Query: 323  IHVVRVSAGDEH 334
             +V ++SAG  H
Sbjct: 3563 KNVRQISAGRNH 3574


>gi|2829910|gb|AAC00618.1| Unknown protein, contains regulator of chromosome condensation
           motifs [Arabidopsis thaliana]
          Length = 1108

 Score = 90.1 bits (222), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 60/177 (33%), Positives = 90/177 (50%), Gaps = 6/177 (3%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++    HAAFV + G++FT G+ S    GH    + +F PRLVE+L         A 
Sbjct: 288 VHQIACGVRHAAFVTRQGEIFTWGEESGGRLGH-GIGKDVFHPRLVESLTATSSVDFVAC 346

Query: 225 LNF-TGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
             F T  +T+ G ++T G  TH  G LGHG  +    PK IA   E   V  ++ GP + 
Sbjct: 347 GEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGSLEGLHVASVSCGPWHT 406

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             +T  G +++FG G+   LGHG++     PR +++    G+  + VS G  H  A+
Sbjct: 407 ALITSYGRLFTFGDGTFGVLGHGDKETVQYPREVESL--SGLRTIAVSCGVWHTAAV 461



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 75/244 (30%), Positives = 114/244 (46%), Gaps = 20/244 (8%)

Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           ++ G +HT LI S   +F+ G    GVLGHG + T  V + R +   S    + VS    
Sbjct: 399 VSCGPWHTALITSYGRLFTFGDGTFGVLGHGDKET--VQYPREVESLSGLRTIAVSCGVW 456

Query: 174 HAAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
           H A V++            SG++FT GD      GH D + P  +P  V AL      ++
Sbjct: 457 HTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKD-PRLKPTCVPALIDYNFHKI 515

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
             G + T  LT  G V T GS  +GQLG+  T D   P  +        V +I+ G  ++
Sbjct: 516 ACGHSLTVGLTTSGQVFTMGSTVYGQLGNLQT-DGKLPCLVEDKLASEFVEEISCGAYHV 574

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
            A+T    VY++G G+N  LGHG+  D   P  ++  + +  HV  ++ G  +  A+   
Sbjct: 575 AALTSRNEVYTWGKGANGRLGHGDLEDRKVPTIVEALKDR--HVKYIACGSNYTAAICLH 632

Query: 342 GYVS 345
            +VS
Sbjct: 633 KWVS 636



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 69/145 (47%), Gaps = 3/145 (2%)

Query: 200 TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP 259
           T   +  P+ +E+   +   Q+  G+    F+T +G + T G  + G+LGHG   D   P
Sbjct: 270 TRTDVLVPKPLESNIVLDVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDVFHP 329

Query: 260 KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQT 317
           + +  L    SV  +A G  +  AVT  G +Y++G G++    LGHG       P+ I  
Sbjct: 330 RLVESLTATSSVDFVACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAG 389

Query: 318 FRRKGIHVVRVSAGDEHVVALDSSG 342
              +G+HV  VS G  H   + S G
Sbjct: 390 -SLEGLHVASVSCGPWHTALITSYG 413


>gi|384947464|gb|AFI37337.1| E3 ISG15--protein ligase HERC5 [Macaca mulatta]
          Length = 1023

 Score = 90.1 bits (222), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 70/208 (33%), Positives = 106/208 (50%), Gaps = 10/208 (4%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QIT G YH+L +S    +F+ G +L G LG G       +   +   +   + Q+SA E
Sbjct: 140 IQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRTFPSTTTPQIVEHLAGVPLAQISAGE 199

Query: 173 NHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            H+  +  SG +++ G N       GH ++      P L+EAL     + +  G + +  
Sbjct: 200 AHSMALSMSGNIYSWGKNEFGQLGLGHTESKD---SPSLIEALDNQKVEFLACGGSHSAL 256

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGNG 288
           LT  G + T G+  HGQLGH  T +   P  +A L  VG+ V QIA G  + LA V+  G
Sbjct: 257 LTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAEL--VGNRVTQIACGRWHTLAYVSDFG 314

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
            V+SFGSG +  LG+G   D+L P  ++
Sbjct: 315 KVFSFGSGKDGQLGNGGTLDQLIPLPVK 342



 Score = 80.9 bits (198), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 51/173 (29%), Positives = 92/173 (53%), Gaps = 3/173 (1%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           ++Q++  + H+  + + G++F  G N     G   T      P++VE L GVP  Q++AG
Sbjct: 139 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRTFPSTTTPQIVEHLAGVPLAQISAG 198

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
              +  L++ G++++ G N  GQLG G T  + +P  I  L+    V  +A G S+   +
Sbjct: 199 EAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDSPSLIEALDN-QKVEFLACGGSHSALL 257

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           T +G++++FG+G +  LGH    +EL+P  +      G  V +++ G  H +A
Sbjct: 258 TQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELV--GNRVTQIACGRWHTLA 308



 Score = 46.6 bits (109), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 60/128 (46%), Gaps = 8/128 (6%)

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGP 278
           Q+T G   +  L+  G +   G N HGQLG G T     TP+ +  L  V  + QI+AG 
Sbjct: 141 QITCGDYHSLALSKGGELFAWGQNLHGQLGVGRTFPSTTTPQIVEHLAGV-PLAQISAGE 199

Query: 279 SYMLAVTGNGVVYSFGSGS--NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
           ++ +A++ +G +YS+G        LGH E  D   P  I+    + +    ++ G  H  
Sbjct: 200 AHSMALSMSGNIYSWGKNEFGQLGLGHTESKD--SPSLIEALDNQKVEF--LACGGSHSA 255

Query: 337 ALDSSGYV 344
            L   G +
Sbjct: 256 LLTQDGLL 263


>gi|350396381|ref|XP_003484535.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Bombus
           impatiens]
          Length = 1088

 Score = 90.1 bits (222), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 107/225 (47%), Gaps = 4/225 (1%)

Query: 115 QITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           ++  G YHT+ ++    +FS GS+  G LG   +     S   +     + +VQV+    
Sbjct: 120 KVACGAYHTIAVNEWGQLFSWGSNSEGQLGLNSKNFMECSPRMVKTLGTSIIVQVACGMK 179

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           HA  +  +G++++ G NS    G     R   +P+L+  L GVP   +  G   +  ++ 
Sbjct: 180 HALALTNNGELYSWGSNSEGQLGLGVDIRSEVKPKLINTLAGVPIAFIACGGYHSIAISK 239

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G +   G NT GQLG  DT +R  P  +  L     +   A G  + + +T +G V++ 
Sbjct: 240 SGAIFGWGKNTFGQLGLNDTQNRNLPHQLQTLRN-AKICYAACGEEFSVFLTVDGGVFTC 298

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           G+G    LGHG  ++E+ PR  Q     G  V ++S G  H +AL
Sbjct: 299 GAGMYGQLGHGSNNNEILPR--QVMELMGSTVTQISCGKRHTLAL 341



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 62/223 (27%), Positives = 111/223 (49%), Gaps = 9/223 (4%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFT-RINFPSAAHVVQVSASENHAAFVLQSGQ 183
           L+    +F  G++  G LG G    + +    +++F  A+ + Q++  EN+   +   G+
Sbjct: 27  LLKKGDMFCWGNTRHGELGLGGIEDEIILVPCQVDFKKASEIQQIACGENYTVVITHDGK 86

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           +++CG+N     GH    +   R +L+  L     K+V  G   T  +   G + + GSN
Sbjct: 87  IYSCGNNDYGQLGHERGRK---RLQLILGLDAFVFKKVACGAYHTIAVNEWGQLFSWGSN 143

Query: 244 THGQLG-HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
           + GQLG +       +P+ +  L     +VQ+A G  + LA+T NG +YS+GS S   LG
Sbjct: 144 SEGQLGLNSKNFMECSPRMVKTL-GTSIIVQVACGMKHALALTNNGELYSWGSNSEGQLG 202

Query: 303 HG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            G +   E++P+ I T    G+ +  ++ G  H +A+  SG +
Sbjct: 203 LGVDIRSEVKPKLINTL--AGVPIAFIACGGYHSIAISKSGAI 243



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 70/237 (29%), Positives = 108/237 (45%), Gaps = 12/237 (5%)

Query: 115 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGH--GPETTQCVSFTRINFPSAAHVVQVSAS 171
           QI  G  +T++I+ +  ++SCG++  G LGH  G +  Q +         A    +V+  
Sbjct: 70  QIACGENYTVVITHDGKIYSCGNNDYGQLGHERGRKRLQLILGL-----DAFVFKKVACG 124

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   V + GQ+F+ G NS    G    N     PR+V+ L      QV  G+     L
Sbjct: 125 AYHTIAVNEWGQLFSWGSNSEGQLGLNSKNFMECSPRMVKTLGTSIIVQVACGMKHALAL 184

Query: 232 TIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           T  G +++ GSN+ GQLG G D      PK I  L  V  +  IA G  + +A++ +G +
Sbjct: 185 TNNGELYSWGSNSEGQLGLGVDIRSEVKPKLINTLAGV-PIAFIACGGYHSIAISKSGAI 243

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSLC 347
           + +G  +   LG  +  +   P  +QT R   I     + G+E  V L   G V  C
Sbjct: 244 FGWGKNTFGQLGLNDTQNRNLPHQLQTLRNAKI--CYAACGEEFSVFLTVDGGVFTC 298



 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 65/149 (43%), Gaps = 4/149 (2%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G YH++ IS S ++F  G +  G LG      + +   ++     A +   +  E  
Sbjct: 227 IACGGYHSIAISKSGAIFGWGKNTFGQLGLNDTQNRNLPH-QLQTLRNAKICYAACGEEF 285

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFLTI 233
           + F+   G VFTCG       GH   N  I  PR V  L G    Q++ G   T   +  
Sbjct: 286 SVFLTVDGGVFTCGAGMYGQLGHGSNNNEIL-PRQVMELMGSTVTQISCGKRHTLALVPS 344

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           +G V+  G    GQLG+  T   PTP+ +
Sbjct: 345 QGRVYAWGLGGAGQLGNNSTRSIPTPQVV 373


>gi|281205822|gb|EFA80011.1| regulator of chromosome condensation domain-containing protein
            [Polysphondylium pallidum PN500]
          Length = 1800

 Score = 90.1 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 69/229 (30%), Positives = 113/229 (49%), Gaps = 12/229 (5%)

Query: 107  VET--SAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA 163
            VET  S+  + I+ G  H++ +  S  ++S GSS  G LGHG  T Q +     +F    
Sbjct: 1080 VETFKSSPIIMISCGGEHSVAVDQSFQIYSWGSSRYGQLGHGVLTPQNLPKKIEDFTGGQ 1139

Query: 164  HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVE-----ALKGVP 217
             V+ ++    H   + +SG +FT G N S   G  +  NR +  P  +E      + G  
Sbjct: 1140 KVLAIATGYAHTMVLKKSGDLFTFGWNDSGQLGLGNFKNRAV--PMRIETSEIVGIHGER 1197

Query: 218  CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG 277
               + AG + +      G +++ G+N+ GQLGHG+      PK I  L+    +++I+ G
Sbjct: 1198 ITAIAAGHSHSIMCLDNGDIYSWGANSKGQLGHGNIEKSLRPKQIDELKG-KPIIKISCG 1256

Query: 278  PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
              + +A++    VY +G G + CLG+G   +EL P+ I+ F  K I  V
Sbjct: 1257 HFHTVAISELNSVYCWGQGEHMCLGNGSNKNELSPKMIEFFINKKIEKV 1305



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 70/240 (29%), Positives = 111/240 (46%), Gaps = 10/240 (4%)

Query: 106  IVETSAGNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAA 163
            +V+     + +  G  H  +IS +  +F+ G++  G LGHG    +  S  R +    ++
Sbjct: 1027 LVKNEKKAVSVACGWEHIAVISSDGELFTWGNNSQGQLGHGLNVGKYQSTPRRVETFKSS 1086

Query: 164  HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK-GVPCKQVT 222
             ++ +S    H+  V QS Q+++ G +     GH     P   P+ +E    G     + 
Sbjct: 1087 PIIMISCGGEHSVAVDQSFQIYSWGSSRYGQLGH-GVLTPQNLPKKIEDFTGGQKVLAIA 1145

Query: 223  AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG----SVVQIAAGP 278
             G   T  L   G + T G N  GQLG G+  +R  P  I   E VG     +  IAAG 
Sbjct: 1146 TGYAHTMVLKKSGDLFTFGWNDSGQLGLGNFKNRAVPMRIETSEIVGIHGERITAIAAGH 1205

Query: 279  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            S+ +    NG +YS+G+ S   LGHG     L+P+ I     KG  ++++S G  H VA+
Sbjct: 1206 SHSIMCLDNGDIYSWGANSKGQLGHGNIEKSLRPKQIDEL--KGKPIIKISCGHFHTVAI 1263



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 55/212 (25%), Positives = 101/212 (47%), Gaps = 15/212 (7%)

Query: 116  ITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+++ + N  ++S G++  G LGHG    + +   +I+      ++++S    H
Sbjct: 1201 IAAGHSHSIMCLDNGDIYSWGANSKGQLGHG-NIEKSLRPKQIDELKGKPIIKISCGHFH 1259

Query: 175  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI- 233
               + +   V+  G     C G+  +N+    P+++E       ++V  GL  T  +T  
Sbjct: 1260 TVAISELNSVYCWGQGEHMCLGN-GSNKNELSPKMIEFFINKKIEKVVCGLYHTATVTAA 1318

Query: 234  -----RGHVHTCGSNTHGQLGHGDTL-----DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
                 RG+V+ CG   HG+LG G  L     D+P P  I  L  + ++V  ++G  +   
Sbjct: 1319 ENGSDRGNVYICGGGEHGKLGTGGDLKTPFFDKPHPAVIPSLNSM-NIVGFSSGSEFSAI 1377

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAI 315
            +T NG +Y++G G+   +G+G+  D   P  I
Sbjct: 1378 ITNNGALYTWGYGNFGQIGNGKTEDMWLPTKI 1409



 Score = 72.0 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 51/180 (28%), Positives = 86/180 (47%), Gaps = 5/180 (2%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAG 224
            V V+    H A +   G++FT G+NS    GH  +  +    PR VE  K  P   ++ G
Sbjct: 1035 VSVACGWEHIAVISSDGELFTWGNNSQGQLGHGLNVGKYQSTPRRVETFKSSPIIMISCG 1094

Query: 225  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
               +  +     +++ GS+ +GQLGHG    +  PK I        V+ IA G ++ + +
Sbjct: 1095 GEHSVAVDQSFQIYSWGSSRYGQLGHGVLTPQNLPKKIEDFTGGQKVLAIATGYAHTMVL 1154

Query: 285  TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH---VVRVSAGDEH-VVALDS 340
              +G +++FG   +  LG G   +   P  I+T    GIH   +  ++AG  H ++ LD+
Sbjct: 1155 KKSGDLFTFGWNDSGQLGLGNFKNRAVPMRIETSEIVGIHGERITAIAAGHSHSIMCLDN 1214



 Score = 47.4 bits (111), Expect = 0.010,   Method: Composition-based stats.
 Identities = 44/165 (26%), Positives = 71/165 (43%), Gaps = 20/165 (12%)

Query: 114  MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINF----------PSA 162
            ++I+ G +HT+ IS  +SV+  G      LG+G    + +S   I F             
Sbjct: 1251 IKISCGHFHTVAISELNSVYCWGQGEHMCLGNGSNKNE-LSPKMIEFFINKKIEKVVCGL 1309

Query: 163  AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHR-DTNRPIF---RPRLVEALKGVPC 218
             H   V+A+EN +      G V+ CG       G   D   P F    P ++ +L  +  
Sbjct: 1310 YHTATVTAAENGS----DRGNVYICGGGEHGKLGTGGDLKTPFFDKPHPAVIPSLNSMNI 1365

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
               ++G  F+  +T  G ++T G    GQ+G+G T D   P  I+
Sbjct: 1366 VGFSSGSEFSAIITNNGALYTWGYGNFGQIGNGKTEDMWLPTKIS 1410


>gi|326674002|ref|XP_001334658.4| PREDICTED: RCC1 and BTB domain-containing protein 2 [Danio rerio]
          Length = 527

 Score = 90.1 bits (222), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 103/218 (47%), Gaps = 4/218 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  VF+ G++  G LG G +T   +   RI+      ++ +S  +  H       G+V+ 
Sbjct: 40  NDEVFALGTNCSGCLGLG-DTQSTIEPRRIDILCGKKIISLSYGTGPHVVIATADGEVYA 98

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N     G+  TN  +    +   L G    +V+ G + T  LT  G V+  G N  G
Sbjct: 99  WGHNGYSQLGNGTTNHGLTPALVSTNLIGKRVTEVSCGSHHTIALTTDGEVYAWGYNNSG 158

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T ++PTP+ ++   +   VV IA G    +AV  NG  Y +G   N  LG G  
Sbjct: 159 QVGSGSTANQPTPRRVSSCLQNKVVVNIACGQLCSMAVLDNGETYGWGYNCNGQLGLGNN 218

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            ++  P  I     +GI++++V+ G  H +AL   G+V
Sbjct: 219 GNQQTPCRIAAL--QGINIIQVACGYAHTLALTDEGFV 254



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 101/213 (47%), Gaps = 11/213 (5%)

Query: 118 TGRYHTLLISNSSVFSCGSSLCGVLGHGPE----TTQCVSFTRINFPSAAHVVQVSASEN 173
           TG +  +  ++  V++ G +    LG+G      T   VS   I       V +VS   +
Sbjct: 83  TGPHVVIATADGEVYAWGHNGYSQLGNGTTNHGLTPALVSTNLI----GKRVTEVSCGSH 138

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           H   +   G+V+  G N+S   G   T N+P  R R+   L+      +  G   +  + 
Sbjct: 139 HTIALTTDGEVYAWGYNNSGQVGSGSTANQPTPR-RVSSCLQNKVVVNIACGQLCSMAVL 197

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G  +  G N +GQLG G+  ++ TP  IA L+ + +++Q+A G ++ LA+T  G VYS
Sbjct: 198 DNGETYGWGYNCNGQLGLGNNGNQQTPCRIAALQGI-NIIQVACGYAHTLALTDEGFVYS 256

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
           +G+ S   LG G + ++  P  I   + + + V
Sbjct: 257 WGANSYGQLGTGNKSNQAVPTLINMDKERMVEV 289



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 44/163 (26%), Positives = 79/163 (48%), Gaps = 4/163 (2%)

Query: 115 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           +++ G +HT+ L ++  V++ G +  G +G G    Q       +      VV ++  + 
Sbjct: 132 EVSCGSHHTIALTTDGEVYAWGYNNSGQVGSGSTANQPTPRRVSSCLQNKVVVNIACGQL 191

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
            +  VL +G+ +  G N +   G    N     P  + AL+G+   QV  G   T  LT 
Sbjct: 192 CSMAVLDNGETYGWGYNCNGQLG-LGNNGNQQTPCRIAALQGINIIQVACGYAHTLALTD 250

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            G V++ G+N++GQLG G+  ++  P  I   +E   +V++AA
Sbjct: 251 EGFVYSWGANSYGQLGTGNKSNQAVPTLINMDKE--RMVEVAA 291


>gi|224093583|ref|XP_002309939.1| predicted protein [Populus trichocarpa]
 gi|222852842|gb|EEE90389.1| predicted protein [Populus trichocarpa]
          Length = 444

 Score = 90.1 bits (222), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 111/231 (48%), Gaps = 7/231 (3%)

Query: 114 MQITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS 171
           + IT G  HT   S S   V+S G    G LGHG  ++   +   I    +  + Q++  
Sbjct: 73  ISITCGADHTTSYSESRMEVYSWGWGDFGRLGHG-NSSDLFTPQPIKALHSLKIRQIACG 131

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           ++H   V   G+V + G N +   G   T   +  P+ ++A +GV  K V AG   T  +
Sbjct: 132 DSHCLAVTMDGEVQSWGRNQNGQLGLGTTEDSLV-PQKIQAFQGVSIKMVAAGAEHTAAV 190

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           T  G ++  G   +G LG GD  DR  P+ ++ L     ++ +A G  + ++V+ +G +Y
Sbjct: 191 TEDGELYGWGWGRYGNLGLGDRNDRLVPEKVS-LVNGDKMIMVACGWRHTISVSSSGGLY 249

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           ++G      LGHG+  D L P  ++  R    ++  +S G  H +AL S G
Sbjct: 250 TYGWSKYGQLGHGDFEDHLTPHKVEALRDS--YISMISGGWRHTMALTSDG 298



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 100/209 (47%), Gaps = 4/209 (1%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HT  ++ +  ++  G    G LG G    + V   +++  +   ++ V+    H
Sbjct: 180 VAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRNDRLVP-EKVSLVNGDKMIMVACGWRH 238

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V  SG ++T G +     GH D    +  P  VEAL+      ++ G   T  LT  
Sbjct: 239 TISVSSSGGLYTYGWSKYGQLGHGDFEDHL-TPHKVEALRDSYISMISGGWRHTMALTSD 297

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
           G+++  G N  GQ+G GD +D  +P  +  P E+  S+VQI+ G  + LA+T    V+S+
Sbjct: 298 GNLYGWGWNKFGQVGVGDNIDHCSPVQVKFPHEQAHSLVQISCGWRHTLAITERQNVFSW 357

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           G G+N  LGHGE  D   P+ I+     G
Sbjct: 358 GRGTNGQLGHGESMDRNLPKIIEVLSADG 386



 Score = 84.0 bits (206), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 62/181 (34%), Positives = 91/181 (50%), Gaps = 7/181 (3%)

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVT 222
            V+ +SA  +H+  +L    V + G       GH D  +RP   P  +  L G+    +T
Sbjct: 19  QVILISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRPT--PTQLSTLDGLDIISIT 76

Query: 223 AGLNFT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
            G + T  +   R  V++ G    G+LGHG++ D  TP+ I  L  +  + QIA G S+ 
Sbjct: 77  CGADHTTSYSESRMEVYSWGWGDFGRLGHGNSSDLFTPQPIKALHSL-KIRQIACGDSHC 135

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           LAVT +G V S+G   N  LG G   D L P+ IQ F  +G+ +  V+AG EH  A+   
Sbjct: 136 LAVTMDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAF--QGVSIKMVAAGAEHTAAVTED 193

Query: 342 G 342
           G
Sbjct: 194 G 194


>gi|427794767|gb|JAA62835.1| Putative hect e3 ubiquitin ligase culex quinquefasciatus hect e3
           ubiquitin ligase, partial [Rhipicephalus pulchellus]
          Length = 1181

 Score = 90.1 bits (222), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 72/224 (32%), Positives = 109/224 (48%), Gaps = 5/224 (2%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  H+L +S++  VFS G +  G LG G E    +    I   +  H+VQ++    H
Sbjct: 146 VACGEAHSLALSDAGQVFSWGCNRNGQLGCGTEEESRLRPKVIKKLATLHIVQIACGAVH 205

Query: 175 AAFVLQSGQVFTCGDNSSFCCG-HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
              +  +G++F+ G N+S   G  RD+      PR V  L GVP   V  G   +  LT 
Sbjct: 206 CLALANNGELFSWGGNASGQLGLGRDSTGNERLPRRVSHLVGVPLALVACGAMHSVGLTP 265

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V   G N+ GQLG  D  DR  P  + PL     +  +  G ++  A+T +G V++F
Sbjct: 266 SGTVFVWGRNSCGQLGLSDQRDRLHPTVLKPLRS-QRIKHVCCGENHTAALTADGGVFTF 324

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           G+G+   LGHG + +E  PR +      G  + ++S G  H VA
Sbjct: 325 GAGTYGQLGHGVKVNEAVPRRVVELM--GTAISQLSCGRCHTVA 366



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/235 (28%), Positives = 112/235 (47%), Gaps = 13/235 (5%)

Query: 115 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           ++  G  HTL L++N SV+SCG++  G LG      +     ++   SA  +  V+  E 
Sbjct: 95  EVACGHKHTLVLLANGSVYSCGANDFGQLGQDRSMRK---LEQVAALSAHEIRAVACGEA 151

Query: 174 HAAFVLQSGQVFT--CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           H+  +  +GQVF+  C  N    CG  + +R   RP++++ L  +   Q+  G      L
Sbjct: 152 HSLALSDAGQVFSWGCNRNGQLGCGTEEESR--LRPKVIKKLATLHIVQIACGAVHCLAL 209

Query: 232 TIRGHVHTCGSNTHGQLGHG--DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
              G + + G N  GQLG G   T +   P+ ++ L  V  +  +A G  + + +T +G 
Sbjct: 210 ANNGELFSWGGNASGQLGLGRDSTGNERLPRRVSHLVGV-PLALVACGAMHSVGLTPSGT 268

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           V+ +G  S   LG  +Q D L P  ++  R + I    V  G+ H  AL + G V
Sbjct: 269 VFVWGRNSCGQLGLSDQRDRLHPTVLKPLRSQRIK--HVCCGENHTAALTADGGV 321



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 62/195 (31%), Positives = 96/195 (49%), Gaps = 7/195 (3%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           +QI  G  H L L +N  +FS G +  G LG G ++T      R ++      +  V+  
Sbjct: 197 VQIACGAVHCLALANNGELFSWGGNASGQLGLGRDSTGNERLPRRVSHLVGVPLALVACG 256

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H+  +  SG VF  G NS    G  D  R    P +++ L+    K V  G N T  L
Sbjct: 257 AMHSVGLTPSGTVFVWGRNSCGQLGLSD-QRDRLHPTVLKPLRSQRIKHVCCGENHTAAL 315

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGV 289
           T  G V T G+ T+GQLGHG  ++   P+ +  +E +G+ + Q++ G  + +A    +G 
Sbjct: 316 TADGGVFTFGAGTYGQLGHGVKVNEAVPRRV--VELMGTAISQLSCGRCHTVAYAPQSGR 373

Query: 290 VYSFGSGSNFCLGHG 304
           +Y FG G +  LG+G
Sbjct: 374 LYIFGLGMSGQLGNG 388



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 77/150 (51%), Gaps = 16/150 (10%)

Query: 199 DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT 258
           DT  P+ +P  V        ++V  G   T  L   G V++CG+N  GQLG         
Sbjct: 74  DTETPVSQPERVRRFGTRAVREVACGHKHTLVLLANGSVYSCGANDFGQLGQD------- 126

Query: 259 PKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQP 312
            +S+  LE+V +     +  +A G ++ LA++  G V+S+G   N  LG G E+   L+P
Sbjct: 127 -RSMRKLEQVAALSAHEIRAVACGEAHSLALSDAGQVFSWGCNRNGQLGCGTEEESRLRP 185

Query: 313 RAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           + I+  +   +H+V+++ G  H +AL ++G
Sbjct: 186 KVIK--KLATLHIVQIACGAVHCLALANNG 213


>gi|194893471|ref|XP_001977881.1| GG19286 [Drosophila erecta]
 gi|190649530|gb|EDV46808.1| GG19286 [Drosophila erecta]
          Length = 4908

 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 76/229 (33%), Positives = 108/229 (47%), Gaps = 9/229 (3%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAF 177
            G++   L  +  VFS G    G LGHG  TT  +   R +    A  +  V+   +H+A 
Sbjct: 3079 GKHALALTLDGKVFSWGEGEDGKLGHGNRTT--LDKPRLVEALRAKKIRDVACGSSHSAA 3136

Query: 178  VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRG 235
            +   G+++T G       GH D N    +P+LV AL G    QV  G     T  LT  G
Sbjct: 3137 ISSQGELYTWGLGEYGRLGHGD-NVTQLKPKLVVALAGRRVVQVACGSRDAQTLALTEDG 3195

Query: 236  HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
             V + G    G+LG G +    TP  I  L  +G VVQI  G  + LA+T  G V+++G 
Sbjct: 3196 AVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIG-VVQIECGAQFSLALTRAGEVWTWGK 3254

Query: 296  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            G  + LGHG      +P+ I   R  G  V+ V+ G  H +A+  +G V
Sbjct: 3255 GDYYRLGHGGDQHVRKPQPIGGLR--GRRVIHVAVGALHCLAVTDAGQV 3301



 Score = 84.3 bits (207), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 73/238 (30%), Positives = 112/238 (47%), Gaps = 14/238 (5%)

Query: 114  MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVS 169
            + I  G     ++S +  V++CG    G LG G   T  V       +        V V 
Sbjct: 3019 IHIAGGSKSLFIVSQDGKVYACGEGTNGRLGLG--VTHNVPLPHQLPVLHQYVVKKVAVH 3076

Query: 170  ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFT 228
            +   HA  +   G+VF+ G+      GH   NR    +PRLVEAL+    + V  G + +
Sbjct: 3077 SGGKHALALTLDGKVFSWGEGEDGKLGH--GNRTTLDKPRLVEALRAKKIRDVACGSSHS 3134

Query: 229  GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG--PSYMLAVTG 286
              ++ +G ++T G   +G+LGHGD + +  PK +  L     VVQ+A G   +  LA+T 
Sbjct: 3135 AAISSQGELYTWGLGEYGRLGHGDNVTQLKPKLVVALAGR-RVVQVACGSRDAQTLALTE 3193

Query: 287  NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            +G V+S+G G    LG G       P  I+  R  GI VV++  G +  +AL  +G V
Sbjct: 3194 DGAVFSWGDGDFGKLGRGGSEGSDTPHEIE--RLSGIGVVQIECGAQFSLALTRAGEV 3249



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 57/181 (31%), Positives = 88/181 (48%), Gaps = 6/181 (3%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAG 224
            V V++   H   +   G+V+  G+      GH   NR  + RP+LVE L G+    +  G
Sbjct: 4135 VAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH--GNRMSYDRPKLVEHLNGMSVADIACG 4192

Query: 225  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLA 283
               +  +T  GHV T G   +G+LGHGD+ D+  PK +  L    ++ +   +G +  L 
Sbjct: 4193 SAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLC 4252

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I++    G+ VV+V  G +  VAL  SG 
Sbjct: 4253 ITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESL--AGLGVVKVECGSQFSVALTKSGA 4310

Query: 344  V 344
            V
Sbjct: 4311 V 4311



 Score = 68.6 bits (166), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 73/287 (25%), Positives = 113/287 (39%), Gaps = 66/287 (22%)

Query: 113  NMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQV 168
             + + +G  H L L +   V++ G    G LGHG      +S+ R   +   +   V  +
Sbjct: 4134 KVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNR----MSYDRPKLVEHLNGMSVADI 4189

Query: 169  SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG------------- 215
            +    H+A +  SG V T G       GH D+   + RP+LVEAL G             
Sbjct: 4190 ACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQL-RPKLVEALLGYRAIDIACGSGDA 4248

Query: 216  -------------------------------VPCK----------QVTAGLNFTGFLTIR 234
                                           +P K          +V  G  F+  LT  
Sbjct: 4249 QTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKS 4308

Query: 235  GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
            G V+T G     +LGHG       PK +A L+    ++ IA G  + +A + +G VY++G
Sbjct: 4309 GAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQG-KKIISIATGSLHCVACSDSGEVYTWG 4367

Query: 295  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
                  LG G      +PR +     +G H+V+V+ G  H +AL +S
Sbjct: 4368 DNDEGQLGDGTVTAIQRPRLVAAL--QGKHIVKVTCGSAHTLALSTS 4412



 Score = 67.8 bits (164), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 49/161 (30%), Positives = 84/161 (52%), Gaps = 6/161 (3%)

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
           ++ G       GH DT+     P  + AL+    + V  G +++  +T  G++ T G  T
Sbjct: 635 YSWGTGEDHRLGHGDTHARAV-PTKIAALEQHCVQSVYCGCSYSAAITCGGNLLTWGRGT 693

Query: 245 HGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 303
           + +LGHG++ DR  P  +  L +   V V + +G ++ LA+T  G+V+++G G    LG+
Sbjct: 694 YARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGN 753

Query: 304 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G  +  LQP  +++  R    V RV AG +  +AL S G +
Sbjct: 754 GNCNGSLQPILVESLPR----VQRVFAGSQFSLALSSEGQL 790



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 95/225 (42%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            +  G  H+  IS+   +++ G    G LGHG   TQ      +   +   VVQV+     
Sbjct: 3127 VACGSSHSAAISSQGELYTWGLGEYGRLGHGDNVTQLKPKLVVAL-AGRRVVQVACGSRD 3185

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    + + G VF+ GD      G R  +     P  +E L G+   Q+  G  F+  LT
Sbjct: 3186 AQTLALTEDGAVFSWGDGDFGKLG-RGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALT 3244

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG       P+ I  L     V+ +A G  + LAVT  G VY+
Sbjct: 3245 RAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGR-RVIHVAVGALHCLAVTDAGQVYA 3303

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G G      +P  +       + V RV+ G  H +A
Sbjct: 3304 WGDNDHGQQGSGNTFVNKKPALVIGL--DAVFVNRVACGSSHSIA 3346



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 57/117 (48%), Gaps = 3/117 (2%)

Query: 230 FLTIRGH--VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           FL I  +   ++ G+    +LGHGDT  R  P  IA LE+   V  +  G SY  A+T  
Sbjct: 625 FLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQ-HCVQSVYCGCSYSAAITCG 683

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G + ++G G+   LGHG   D   P  +       +  V + +GD H +AL S G V
Sbjct: 684 GNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLV 740


>gi|18411298|ref|NP_565144.1| regulator of chromosome condensation and FYVE zinc finger
           domain-containing protein [Arabidopsis thaliana]
 gi|15811367|gb|AAL08940.1| zinc finger protein [Arabidopsis thaliana]
 gi|332197787|gb|AEE35908.1| regulator of chromosome condensation and FYVE zinc finger
           domain-containing protein [Arabidopsis thaliana]
          Length = 1103

 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/177 (33%), Positives = 90/177 (50%), Gaps = 6/177 (3%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++    HAAFV + G++FT G+ S    GH    + +F PRLVE+L         A 
Sbjct: 283 VHQIACGVRHAAFVTRQGEIFTWGEESGGRLGH-GIGKDVFHPRLVESLTATSSVDFVAC 341

Query: 225 LNF-TGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
             F T  +T+ G ++T G  TH  G LGHG  +    PK IA   E   V  ++ GP + 
Sbjct: 342 GEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGSLEGLHVASVSCGPWHT 401

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             +T  G +++FG G+   LGHG++     PR +++    G+  + VS G  H  A+
Sbjct: 402 ALITSYGRLFTFGDGTFGVLGHGDKETVQYPREVESL--SGLRTIAVSCGVWHTAAV 456



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 75/244 (30%), Positives = 114/244 (46%), Gaps = 20/244 (8%)

Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           ++ G +HT LI S   +F+ G    GVLGHG + T  V + R +   S    + VS    
Sbjct: 394 VSCGPWHTALITSYGRLFTFGDGTFGVLGHGDKET--VQYPREVESLSGLRTIAVSCGVW 451

Query: 174 HAAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
           H A V++            SG++FT GD      GH D + P  +P  V AL      ++
Sbjct: 452 HTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKD-PRLKPTCVPALIDYNFHKI 510

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
             G + T  LT  G V T GS  +GQLG+  T D   P  +        V +I+ G  ++
Sbjct: 511 ACGHSLTVGLTTSGQVFTMGSTVYGQLGNLQT-DGKLPCLVEDKLASEFVEEISCGAYHV 569

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
            A+T    VY++G G+N  LGHG+  D   P  ++  + +  HV  ++ G  +  A+   
Sbjct: 570 AALTSRNEVYTWGKGANGRLGHGDLEDRKVPTIVEALKDR--HVKYIACGSNYTAAICLH 627

Query: 342 GYVS 345
            +VS
Sbjct: 628 KWVS 631



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 69/145 (47%), Gaps = 3/145 (2%)

Query: 200 TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP 259
           T   +  P+ +E+   +   Q+  G+    F+T +G + T G  + G+LGHG   D   P
Sbjct: 265 TRTDVLVPKPLESNIVLDVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDVFHP 324

Query: 260 KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQT 317
           + +  L    SV  +A G  +  AVT  G +Y++G G++    LGHG       P+ I  
Sbjct: 325 RLVESLTATSSVDFVACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRI-A 383

Query: 318 FRRKGIHVVRVSAGDEHVVALDSSG 342
              +G+HV  VS G  H   + S G
Sbjct: 384 GSLEGLHVASVSCGPWHTALITSYG 408


>gi|357464765|ref|XP_003602664.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|358348400|ref|XP_003638235.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355491712|gb|AES72915.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355504170|gb|AES85373.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
          Length = 439

 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/229 (31%), Positives = 118/229 (51%), Gaps = 8/229 (3%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I+ G  H++ LIS + V S G    G LGHG +T   +  T+++   A  +V V    +H
Sbjct: 20  ISAGGSHSVALISGNVVCSWGRGEDGQLGHG-DTDDRLLPTQLSALDAQQIVSVVCGADH 78

Query: 175 A-AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
             A+     +V++ G       GH +++  +F P+ + AL+G+  KQ+  G +    +T+
Sbjct: 79  TLAYSESKVEVYSWGWGDFGRLGHGNSSD-LFIPQPIRALQGLRIKQIACGDSHCLAVTM 137

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V + G N +GQLG G T D   P+ I   + V  +  +AAG  + +A+T NG +Y +
Sbjct: 138 EGEVQSWGRNQNGQLGLGTTEDSLVPQKIQTFQGV-PIKMVAAGAEHSVAITENGELYGW 196

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           G G    LG G+++D   P  +     K   +V V+ G  H +++ SSG
Sbjct: 197 GWGRYGNLGLGDRNDRCIPEKVSVDCDK---MVLVACGWRHTISVSSSG 242



 Score = 89.0 bits (219), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 69/238 (28%), Positives = 112/238 (47%), Gaps = 22/238 (9%)

Query: 114 MQITTGRYHTLLISNSSV--FSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAH 164
           + +  G  HTL  S S V  +S G    G LGHG       P+  + +   RI       
Sbjct: 70  VSVVCGADHTLAYSESKVEVYSWGWGDFGRLGHGNSSDLFIPQPIRALQGLRIK------ 123

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
             Q++  ++H   V   G+V + G N +   G   T   +  P+ ++  +GVP K V AG
Sbjct: 124 --QIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDSLV-PQKIQTFQGVPIKMVAAG 180

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
              +  +T  G ++  G   +G LG GD  DR  P+ ++   +   +V +A G  + ++V
Sbjct: 181 AEHSVAITENGELYGWGWGRYGNLGLGDRNDRCIPEKVSV--DCDKMVLVACGWRHTISV 238

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           + +G +Y++G      LGHG+  D L P  +Q F  K   + +VS G  H +AL + G
Sbjct: 239 SSSGELYTYGWSKYGQLGHGDCKDHLVPHKLQAFSDK--LICQVSGGWRHTMALTTGG 294



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 64/194 (32%), Positives = 96/194 (49%), Gaps = 5/194 (2%)

Query: 150 QCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRL 209
           Q V  T  + P    V+ +SA  +H+  ++    V + G       GH DT+  +  P  
Sbjct: 2   QEVEATTASPPPPRRVLLISAGGSHSVALISGNVVCSWGRGEDGQLGHGDTDDRLL-PTQ 60

Query: 210 VEALKGVPCKQVTAGLNFT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 268
           + AL       V  G + T  +   +  V++ G    G+LGHG++ D   P+ I  L+ +
Sbjct: 61  LSALDAQQIVSVVCGADHTLAYSESKVEVYSWGWGDFGRLGHGNSSDLFIPQPIRALQGL 120

Query: 269 GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 328
             + QIA G S+ LAVT  G V S+G   N  LG G   D L P+ IQTF  +G+ +  V
Sbjct: 121 -RIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQTF--QGVPIKMV 177

Query: 329 SAGDEHVVALDSSG 342
           +AG EH VA+  +G
Sbjct: 178 AAGAEHSVAITENG 191



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 98/209 (46%), Gaps = 7/209 (3%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  H++ I+ N  ++  G    G LG G    +C+   +++      +V V+    H
Sbjct: 177 VAAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRCIP-EKVSV-DCDKMVLVACGWRH 234

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V  SG+++T G +     GH D    +  P  ++A       QV+ G   T  LT  
Sbjct: 235 TISVSSSGELYTYGWSKYGQLGHGDCKDHLV-PHKLQAFSDKLICQVSGGWRHTMALTTG 293

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
           G ++  G N  GQ+G GD +DR +P  +  P ++   V QI+ G  + +AVT    VYS+
Sbjct: 294 GQLYGWGWNKFGQVGVGDNVDRCSPVQVKFPHDQ--KVAQISCGWRHTIAVTEKDNVYSW 351

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           G G+N  LG G+  D   P+ I+     G
Sbjct: 352 GRGTNGQLGIGDTIDWNYPKIIEALSVDG 380



 Score = 55.1 bits (131), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 50/159 (31%), Positives = 71/159 (44%), Gaps = 3/159 (1%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HT+ +S+S  +++ G S  G LGHG      V      F S   + QVS    H
Sbjct: 228 VACGWRHTISVSSSGELYTYGWSKYGQLGHGDCKDHLVPHKLQAF-SDKLICQVSGGWRH 286

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              +   GQ++  G N     G  D N     P  V+        Q++ G   T  +T +
Sbjct: 287 TMALTTGGQLYGWGWNKFGQVGVGD-NVDRCSPVQVKFPHDQKVAQISCGWRHTIAVTEK 345

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            +V++ G  T+GQLG GDT+D   PK I  L   GS  Q
Sbjct: 346 DNVYSWGRGTNGQLGIGDTIDWNYPKIIEALSVDGSCGQ 384


>gi|18087541|gb|AAL58903.1|AF462811_1 At1g76950/F22K20_5 [Arabidopsis thaliana]
 gi|27363446|gb|AAO11642.1| At1g76950/F22K20_5 [Arabidopsis thaliana]
          Length = 1103

 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/177 (33%), Positives = 90/177 (50%), Gaps = 6/177 (3%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++    HAAFV + G++FT G+ S    GH    + +F PRLVE+L         A 
Sbjct: 283 VHQIACGVRHAAFVTRQGEIFTWGEESGGRLGH-GIGKDVFHPRLVESLTATSSVDFVAC 341

Query: 225 LNF-TGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
             F T  +T+ G ++T G  TH  G LGHG  +    PK IA   E   V  ++ GP + 
Sbjct: 342 GEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGSLEGLHVASVSCGPWHT 401

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             +T  G +++FG G+   LGHG++     PR +++    G+  + VS G  H  A+
Sbjct: 402 ALITSYGRLFTFGDGTFGVLGHGDKETVQYPREVESL--SGLRTIAVSCGVWHTAAV 456



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 75/244 (30%), Positives = 114/244 (46%), Gaps = 20/244 (8%)

Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           ++ G +HT LI S   +F+ G    GVLGHG + T  V + R +   S    + VS    
Sbjct: 394 VSCGPWHTALITSYGRLFTFGDGTFGVLGHGDKET--VQYPREVESLSGLRTIAVSCGVW 451

Query: 174 HAAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
           H A V++            SG++FT GD      GH D + P  +P  V AL      ++
Sbjct: 452 HTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKD-PRLKPTCVPALIDYNFHKI 510

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
             G + T  LT  G V T GS  +GQLG+  T D   P  +        V +I+ G  ++
Sbjct: 511 ACGHSLTVGLTTSGQVFTMGSTVYGQLGNLQT-DGKLPCLVEDKLASEFVEEISCGAYHV 569

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
            A+T    VY++G G+N  LGHG+  D   P  ++  + +  HV  ++ G  +  A+   
Sbjct: 570 AALTSRNEVYTWGKGANGRLGHGDLEDRKVPTIVEALKDR--HVKYIACGSNYTAAICLH 627

Query: 342 GYVS 345
            +VS
Sbjct: 628 KWVS 631



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 69/145 (47%), Gaps = 3/145 (2%)

Query: 200 TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP 259
           T   +  P+ +E+   +   Q+  G+    F+T +G + T G  + G+LGHG   D   P
Sbjct: 265 TRTDVLVPKPLESNIVLDVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDVFHP 324

Query: 260 KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQT 317
           + +  L    SV  +A G  +  AVT  G +Y++G G++    LGHG       P+ I  
Sbjct: 325 RLVESLTATSSVDFVACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRI-A 383

Query: 318 FRRKGIHVVRVSAGDEHVVALDSSG 342
              +G+HV  VS G  H   + S G
Sbjct: 384 GSLEGLHVASVSCGPWHTALITSYG 408


>gi|391344583|ref|XP_003746575.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Metaseiulus occidentalis]
          Length = 1152

 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/232 (31%), Positives = 112/232 (48%), Gaps = 8/232 (3%)

Query: 115 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI TG +HTL L S+  V SCGS+    LG    TT+    T +       +VQV   + 
Sbjct: 55  QIATGAHHTLVLTSHGRVLSCGSNDHDQLGQEVSTTKPEPVTALQ---CLRIVQVCCGQQ 111

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  + ++GQV+  G NS    G+ +       PR V+ L      Q+  G N    L  
Sbjct: 112 HSMALTEAGQVYMWGSNSKGQLGNGEGQESRLSPRFVKTLAPFTVVQIACGSNHCLALLN 171

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYS 292
            G ++  G N +GQLG G T+  P    +     +G  + QIA G ++ + ++ +GV++ 
Sbjct: 172 NGALYAWGDNGNGQLGIG-TVGEPQRVPVEVTNLLGLPLSQIACGANHSMVLSKSGVIFV 230

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           +GS     LG  +  D   P  ++T R++  HV  ++AG  H  AL + G V
Sbjct: 231 WGSNRFGQLGLSDNKDRAFPTLLKTLRQQ--HVKFIAAGGAHSAALTAHGGV 280



 Score = 81.3 bits (199), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 73/264 (27%), Positives = 115/264 (43%), Gaps = 44/264 (16%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G+ H++ ++ +  V+  GS+  G LG+G      +S   +   +   VVQ++   
Sbjct: 104 VQVCCGQQHSMALTEAGQVYMWGSNSKGQLGNGEGQESRLSPRFVKTLAPFTVVQIACGS 163

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           NH   +L +G ++  GDN +   G      P   P  V  L G+P  Q+  G N +  L+
Sbjct: 164 NHCLALLNNGALYAWGDNGNGQLGIGTVGEPQRVPVEVTNLLGLPLSQIACGANHSMVLS 223

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G +   GSN  GQLG  D  DR  P  +  L +   V  IAAG ++  A+T +G V++
Sbjct: 224 KSGVIFVWGSNRFGQLGLSDNKDRAFPTLLKTLRQ-QHVKFIAAGGAHSAALTAHGGVFT 282

Query: 293 F---------------GSGSN----------------FC---------LGHGEQHDELQP 312
           F               G+ SN                FC         LGHG ++D+L P
Sbjct: 283 FGWSFYESHEVRISLRGTESNPQSALARKLFSLIEREFCRHSYGSYGQLGHGSKNDQLTP 342

Query: 313 RAIQTFRRKGIHVVRVSAGDEHVV 336
             IQ     G  + +++ G  H V
Sbjct: 343 MKIQEL--MGTTITQIALGRCHTV 364



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/137 (35%), Positives = 74/137 (54%), Gaps = 6/137 (4%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           PR +  L+G+  +Q+  G + T  LT  G V +CGSN H QLG   +  +P P +     
Sbjct: 42  PRSIPQLEGIRVRQIATGAHHTLVLTSHGRVLSCGSNDHDQLGQEVSTTKPEPVTAL--- 98

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGIHV 325
           +   +VQ+  G  + +A+T  G VY +GS S   LG+GE Q   L PR ++T       V
Sbjct: 99  QCLRIVQVCCGQQHSMALTEAGQVYMWGSNSKGQLGNGEGQESRLSPRFVKTL--APFTV 156

Query: 326 VRVSAGDEHVVALDSSG 342
           V+++ G  H +AL ++G
Sbjct: 157 VQIACGSNHCLALLNNG 173



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 65/215 (30%), Positives = 102/215 (47%), Gaps = 13/215 (6%)

Query: 135 GSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G      V   R I       V Q++   +H   +   G+V +CG N   
Sbjct: 22  GNTNSGELGLGGIEDHIVRVPRSIPQLEGIRVRQIATGAHHTLVLTSHGRVLSCGSNDHD 81

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 253
             G   +     +P  V AL+ +   QV  G   +  LT  G V+  GSN+ GQLG+G+ 
Sbjct: 82  QLGQEVSTT---KPEPVTALQCLRIVQVCCGQQHSMALTEAGQVYMWGSNSKGQLGNGEG 138

Query: 254 LD-RPTP---KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE 309
            + R +P   K++AP     +VVQIA G ++ LA+  NG +Y++G   N  LG G    E
Sbjct: 139 QESRLSPRFVKTLAPF----TVVQIACGSNHCLALLNNGALYAWGDNGNGQLGIGTV-GE 193

Query: 310 LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            Q   ++     G+ + +++ G  H + L  SG +
Sbjct: 194 PQRVPVEVTNLLGLPLSQIACGANHSMVLSKSGVI 228



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 60/235 (25%), Positives = 92/235 (39%), Gaps = 52/235 (22%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHG----PETTQCVSFTRINFPSAAHVVQV 168
           +QI  G  H L L++N ++++ G +  G LG G    P+         +  P    + Q+
Sbjct: 157 VQIACGSNHCLALLNNGALYAWGDNGNGQLGIGTVGEPQRVPVEVTNLLGLP----LSQI 212

Query: 169 SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
           +   NH+  + +SG +F  G N     G  D     F P L++ L+    K + AG   +
Sbjct: 213 ACGANHSMVLSKSGVIFVWGSNRFGQLGLSDNKDRAF-PTLLKTLRQQHVKFIAAGGAHS 271

Query: 229 GFLTIRGHVHTCGSN----------------------------------------THGQL 248
             LT  G V T G +                                        ++GQL
Sbjct: 272 AALTAHGGVFTFGWSFYESHEVRISLRGTESNPQSALARKLFSLIEREFCRHSYGSYGQL 331

Query: 249 GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN-GVVYSFGSGSNFCLG 302
           GHG   D+ TP  I  L    ++ QIA G  + +      G V++FG G N  LG
Sbjct: 332 GHGSKNDQLTPMKIQELMGT-TITQIALGRCHTVCYAPTVGKVFTFGLGGNGQLG 385


>gi|198471444|ref|XP_001355626.2| GA11166 [Drosophila pseudoobscura pseudoobscura]
 gi|198145920|gb|EAL32685.2| GA11166 [Drosophila pseudoobscura pseudoobscura]
          Length = 5072

 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 74/229 (32%), Positives = 108/229 (47%), Gaps = 9/229 (3%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAF 177
            G++   L  +  VFS G    G LGHG  TT  +   R +    +  +  V+   +H+A 
Sbjct: 3191 GKHALALTLDGKVFSWGEGEDGKLGHGNRTT--LDKPRLVETLRSKKIRDVACGSSHSAA 3248

Query: 178  VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRG 235
            +   G+++T G       GH D N    +P+LV AL G    QV  G     T  LT  G
Sbjct: 3249 ISSQGELYTWGLGEYGRLGHGD-NSTQLKPKLVAALAGRRVIQVACGSRDAQTLALTEDG 3307

Query: 236  HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
             V + G    G+LG G +    TP  I  L  +G V+QI  G  + LA+T  G V+++G 
Sbjct: 3308 AVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIG-VIQIECGAQFSLALTRAGEVWTWGK 3366

Query: 296  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            G  + LGHG      +P+ I   R  G  V+ V+ G  H +A+  +G V
Sbjct: 3367 GDYYRLGHGGDQHVRKPQPIAGLR--GRRVIHVAVGALHCLAVTDAGQV 3413



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 69/223 (30%), Positives = 105/223 (47%), Gaps = 13/223 (5%)

Query: 128  NSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSASENHAAFVLQSGQV 184
            N  V++CG    G LG G   T  V       +        V V +   HA  +   G+V
Sbjct: 3146 NGKVYACGEGTNGRLGLG--VTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKV 3203

Query: 185  FTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            F+ G+      GH   NR    +PRLVE L+    + V  G + +  ++ +G ++T G  
Sbjct: 3204 FSWGEGEDGKLGH--GNRTTLDKPRLVETLRSKKIRDVACGSSHSAAISSQGELYTWGLG 3261

Query: 244  THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCL 301
             +G+LGHGD   +  PK +A L     V+Q+A G   +  LA+T +G V+S+G G    L
Sbjct: 3262 EYGRLGHGDNSTQLKPKLVAALAGR-RVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKL 3320

Query: 302  GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            G G       P  I+  R  GI V+++  G +  +AL  +G V
Sbjct: 3321 GRGGSEGSDTPHEIE--RLSGIGVIQIECGAQFSLALTRAGEV 3361



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 67/238 (28%), Positives = 109/238 (45%), Gaps = 14/238 (5%)

Query: 113  NMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQV 168
             + + +G  H L L +   V++ G    G LGHG      +S+ R   +   +  +V  +
Sbjct: 4325 KVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNR----MSYDRPKLVEHLNGMNVADI 4380

Query: 169  SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
            +    H+A +  SG V T G       GH D+   + RP+LVEAL G     +  G    
Sbjct: 4381 ACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQL-RPQLVEALLGYRAIDIACGSGDA 4439

Query: 229  GFLTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
              L I    +V + G   +G+LG G +     P  I  L  +G V+++  G  + +A+T 
Sbjct: 4440 QTLCINDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLG-VIKVECGSQFSVALTK 4498

Query: 287  NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            +G VY++G G    LGHG      +P+ +     +G  ++ ++ G  H VA   SG V
Sbjct: 4499 SGAVYTWGKGDFHRLGHGSVDHVRRPKKVAAL--QGKKIISIATGSLHCVACSDSGEV 4554



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 103/237 (43%), Gaps = 10/237 (4%)

Query: 106  IVET--SAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA 162
            +VET  S     +  G  H+  IS+   +++ G    G LGHG  +TQ +    +   + 
Sbjct: 3227 LVETLRSKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNSTQ-LKPKLVAALAG 3285

Query: 163  AHVVQVSASENHAA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
              V+QV+     A    + + G VF+ GD      G R  +     P  +E L G+   Q
Sbjct: 3286 RRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLG-RGGSEGSDTPHEIERLSGIGVIQ 3344

Query: 221  VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
            +  G  F+  LT  G V T G   + +LGHG       P+ IA L     V+ +A G  +
Sbjct: 3345 IECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIAGLRGR-RVIHVAVGALH 3403

Query: 281  MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             LAVT  G VY++G   +   G G      +P  +       + V RV+ G  H +A
Sbjct: 3404 CLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGL--DAVFVNRVACGSSHSIA 3458



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 52/175 (29%), Positives = 85/175 (48%), Gaps = 14/175 (8%)

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTI 233
             V Q+G+V+ CG+ ++   G   T N P+  P  +  L     K+V   +G      LT+
Sbjct: 3142 IVGQNGKVYACGEGTNGRLGLGVTHNVPL--PHQLPVLHQYVVKKVAVHSGGKHALALTL 3199

Query: 234  RGHVHTCGSNTHGQLGHGD--TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
             G V + G    G+LGHG+  TLD+P    +        +  +A G S+  A++  G +Y
Sbjct: 3200 DGKVFSWGEGEDGKLGHGNRTTLDKP---RLVETLRSKKIRDVACGSSHSAAISSQGELY 3256

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVVALDSSGYV 344
            ++G G    LGHG+   +L+P+ +      G  V++V+ G  D   +AL   G V
Sbjct: 3257 TWGLGEYGRLGHGDNSTQLKPKLVAAL--AGRRVIQVACGSRDAQTLALTEDGAV 3309



 Score = 61.2 bits (147), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 82/161 (50%), Gaps = 7/161 (4%)

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
           ++ G+      GH DT+      ++    + V  K V  G +++  +T  G+++T G  T
Sbjct: 642 YSWGNGEDHRLGHGDTHARAVPTKITLLDRCV--KAVFCGCSYSAAITCSGNLYTWGRGT 699

Query: 245 HGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 303
           + +LGHG++ D+P P  +  L E   + V + +G ++ L +T  G VY++G      LG+
Sbjct: 700 YARLGHGNSDDQPLPTVVMALTEHEIIDVALGSGDAHSLCLTSEGHVYAWGDADYGKLGN 759

Query: 304 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G  +  + P  +++  +    V RV AG +  +AL + G +
Sbjct: 760 GNLNGSMSPVLVESLPK----VQRVFAGAQFSMALTTDGQL 796



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 70/146 (47%), Gaps = 6/146 (4%)

Query: 202 RPIFRPRLVEALKGVPCKQVTA---GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT 258
           +P   P+L+E +       + +   G +F   + I  + ++ G+    +LGHGDT  R  
Sbjct: 604 KPETEPQLLEEIAHETIVSIASHCEGRHFMA-IDINRNAYSWGNGEDHRLGHGDTHARAV 662

Query: 259 PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 318
           P  I  L+    V  +  G SY  A+T +G +Y++G G+   LGHG   D+  P  +   
Sbjct: 663 PTKITLLDRC--VKAVFCGCSYSAAITCSGNLYTWGRGTYARLGHGNSDDQPLPTVVMAL 720

Query: 319 RRKGIHVVRVSAGDEHVVALDSSGYV 344
               I  V + +GD H + L S G+V
Sbjct: 721 TEHEIIDVALGSGDAHSLCLTSEGHV 746



 Score = 40.8 bits (94), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 50/111 (45%), Gaps = 7/111 (6%)

Query: 237  VHTCGSNTHGQLG--HGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            V   G N   QLG   G  +  PT  ++I+ L  +     IA G   +  V  NG VY+ 
Sbjct: 3097 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPI----HIAGGSKSLFIVGQNGKVYAC 3152

Query: 294  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            G G+N  LG G  H+   P  +    +  +  V V +G +H +AL   G V
Sbjct: 3153 GEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKV 3203


>gi|3414809|gb|AAC31431.1| rjs [Mus musculus]
          Length = 4836

 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/228 (32%), Positives = 107/228 (46%), Gaps = 7/228 (3%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3057 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3115

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3116 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGTRDAQTLALTDEGL 3174

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3175 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3233

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG V
Sbjct: 3234 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQV 3279



 Score = 89.0 bits (219), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 118/251 (47%), Gaps = 12/251 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4032 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4085

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4086 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4144

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4145 HRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGSKVPMKIDSLTGLG-VVK 4203

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4204 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4261

Query: 334  HVVALDSSGYV 344
            H V     G V
Sbjct: 4262 HCVCCTEDGEV 4272



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 109/237 (45%), Gaps = 17/237 (7%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 169
           + G ++  L +   V+S G    G LGHG       P+     S  +    +  HVV ++
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AGKHVVHIA 558

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G     
Sbjct: 559 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQ 617

Query: 230 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
            L +   G V + G   +G+LG G +    TPK I  L+++  V+++  G  + +A+T +
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVIKVRCGSQFSIALTKD 676

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G VYS+G G N  LG G +     P+ ++    +G  V+ V+AG  H +AL     V
Sbjct: 677 GQVYSWGKGDNQRLGLGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEV 731



 Score = 80.9 bits (198), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 70/221 (31%), Positives = 110/221 (49%), Gaps = 12/221 (5%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFT 186
             V+SCG +  G LG G  ++  V   R     +++VV+   V +   HA  +   G+VF+
Sbjct: 3013 KVYSCGEATNGRLGLG-MSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3071

Query: 187  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
             G+      GH  +     +PRL+EALK    + +  G + +  LT  G ++T G   +G
Sbjct: 3072 WGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 3130

Query: 247  QLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGH 303
            +LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG 
Sbjct: 3131 RLGHGDNTTQLKPKMVKVL--LGHRVIQVACGTRDAQTLALTDEGLVFSWGDGDFGKLGR 3188

Query: 304  GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            G       P+ I+  R  G  V ++  G +  +AL  SG V
Sbjct: 3189 GGSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVV 3227



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 57/187 (30%), Positives = 94/187 (50%), Gaps = 20/187 (10%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V+QV+ +E     + ++G+V+T   NS            +  P+LV+ L      ++ A 
Sbjct: 454 VMQVACAEKRFLILSRNGRVYTQAYNSD-----------MLAPQLVQGLASRNIVKIAAH 502

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 620

Query: 338 LDSSGYV 344
           +  +G V
Sbjct: 621 VTENGQV 627



 Score = 74.7 bits (182), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 92/190 (48%), Gaps = 11/190 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V++CG+  N     G      PI  PR + AL     
Sbjct: 2991 SALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPI--PRQITALSSYVV 3048

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L +   +  IA 
Sbjct: 3049 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL-KTKRIRDIAC 3107

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3108 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGTRDAQ 3165

Query: 335  VVALDSSGYV 344
             +AL   G V
Sbjct: 3166 TLALTDEGLV 3175



 Score = 67.8 bits (164), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3105 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGTRD 3163

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3164 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3222

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3223 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3281

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3282 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3324



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 78/162 (48%), Gaps = 5/162 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V++CG 
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGE 3019

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3020 ATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3079

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG
Sbjct: 3080 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSG 3119



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 81/177 (45%), Gaps = 5/177 (2%)

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA--FV 178
           Y   + +   +++ G    G LGHG    + +            V+ V+     A    V
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAV 621

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
            ++GQV++ GD      G R  +     P+L+E L+ +   +V  G  F+  LT  G V+
Sbjct: 622 TENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVY 680

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
           + G   + +LG G       PK +  L+    V+ +AAG ++ LA+T +  V+S+GS
Sbjct: 681 SWGKGDNQRLGLGTEEHVRYPKLLEGLQG-KKVIDVAAGSTHCLALTEDSEVHSWGS 736



 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 75/167 (44%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G      V   +I+  +   VV+V      + 
Sbjct: 4154 SGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGSKVPM-KIDSLTGLGVVKVECGSQFSV 4212

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4213 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4271

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4272 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4317



 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/171 (30%), Positives = 76/171 (44%), Gaps = 12/171 (7%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       V++V      + 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVIKVRCGSQFSI 671

Query: 177 FVLQSGQVFTCG--DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
            + + GQV++ G  DN     G   T   +  P+L+E L+G     V AG      LT  
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGLG---TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTED 728

Query: 235 GHVHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
             VH+ GSN   Q  H DTL   +P P ++  L+    +V IA GP+   A
Sbjct: 729 SEVHSWGSNDQCQ--HFDTLRVTKPEPTALPGLDS-KHIVGIACGPAQSFA 776



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122  HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 3165 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 3223

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SG V+T G    F  GH  ++  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 3224 SGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3282

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 3283 GDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 3326



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 67/137 (48%), Gaps = 3/137 (2%)

Query: 207  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            P   EAL  +   Q+  G      +T  G ++  G    G+LG G T    TP  +  ++
Sbjct: 3978 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQ 4037

Query: 267  EVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
             V    V + +G  + LA++  G VYS+G   +  LGHG +    +PR I++ R  GI V
Sbjct: 4038 HVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLR--GIEV 4095

Query: 326  VRVSAGDEHVVALDSSG 342
            V V+AG  H   + ++G
Sbjct: 4096 VDVAAGGAHSACVTAAG 4112



 Score = 41.2 bits (95), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 7/113 (6%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3954 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4009

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G V
Sbjct: 4010 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4062


>gi|170050907|ref|XP_001861523.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
 gi|167872400|gb|EDS35783.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
          Length = 4784

 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 76/235 (32%), Positives = 108/235 (45%), Gaps = 21/235 (8%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSAS 171
            G++   L  +  VFS G    G LGHG       P+  + +   RI          ++  
Sbjct: 3003 GKHAMALTLDGKVFSWGEGEDGKLGHGNRVTLEKPKLLESLRTKRIR--------DIACG 3054

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TG 229
             +H+A +  SG+++T G       GH D N    +P+LV AL+G    QV  G     T 
Sbjct: 3055 SSHSAAITSSGELYTWGLGEYGRLGHGD-NCTQLKPKLVTALQGHRVVQVACGSRDAQTL 3113

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             LT  G V + G    G+LG G +     P  +  L  VG VVQI  G  + LA+T  G 
Sbjct: 3114 CLTEEGLVFSWGDGDFGKLGRGGSEGCSVPHQVERLNGVG-VVQIECGAQFSLALTKIGE 3172

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            V+++G G  + LGHG      +P  IQ  R  G  V+ V+ G  H +A+  SG V
Sbjct: 3173 VWTWGKGDYYRLGHGTDQHVRKPTPIQGLR--GKKVIHVAVGALHCLAVTDSGQV 3225



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/194 (32%), Positives = 94/194 (48%), Gaps = 15/194 (7%)

Query: 153 SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA 212
           S   I  P +  V QV+ +EN    V  SGQ+++     S C            P+LVE 
Sbjct: 524 STATIELPPSLQVRQVACTENSIYIVTTSGQLYSI---HSSCA-------ETVAPKLVEG 573

Query: 213 LKGVPCKQVTAGLN--FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 270
           L+GV   Q+ A         L+  G V++ G+   G+LGHGDT  +  P  IA LE+   
Sbjct: 574 LEGVSVIQIAAHCEGRHAMALSSAGEVYSWGAGEGGRLGHGDTASKEVPTKIA-LEK--Q 630

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V  I AG SY  AV+  G ++++G G+   LGHG   D+  P  +Q  +   +  V + +
Sbjct: 631 VTAIYAGASYSAAVSSVGELFTWGRGTYGRLGHGNSDDKFVPTQVQALKAYKVVDVALGS 690

Query: 331 GDEHVVALDSSGYV 344
           GD H +A+   G +
Sbjct: 691 GDAHSMAVTDGGLL 704



 Score = 81.6 bits (200), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 70/226 (30%), Positives = 108/226 (47%), Gaps = 11/226 (4%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           GR+   L S   V+S G+   G LGHG   ++ V  T+I       V  + A  +++A V
Sbjct: 588 GRHAMALSSAGEVYSWGAGEGGRLGHGDTASKEVP-TKIAL--EKQVTAIYAGASYSAAV 644

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIRGH 236
              G++FT G  +    GH +++   F P  V+ALK      V   +G   +  +T  G 
Sbjct: 645 SSVGELFTWGRGTYGRLGHGNSDDK-FVPTQVQALKAYKVVDVALGSGDAHSMAVTDGGL 703

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           +   G    G+LG+G     P P  I   E V SV +I +G  + +A++ +G +YS+G G
Sbjct: 704 LFAWGDGDFGKLGNGSCNGSPLPVQI---EGVSSVARIYSGSQFSVALSYDGTLYSWGKG 760

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
               LGHG       P+ +     +G  +V V+ G  H +AL SSG
Sbjct: 761 HGGRLGHGNSEHSNVPKLVHAL--EGKKIVDVAVGSAHCLALTSSG 804



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 37/212 (17%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAG 224
            V V++   H   +   G+VF+ G+      GH   NR  + RP+L+EAL G+    +  G
Sbjct: 4034 VAVNSGGKHCLALSSDGEVFSWGEGEDGKLGH--GNRDSYDRPKLIEALSGIGVVDIACG 4091

Query: 225  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK-------------------SIAPL 265
               +  +T +GHV T G   +G+LGHGD+ D+  PK                   S+A  
Sbjct: 4092 SAHSACITSQGHVLTWGKGRYGRLGHGDSEDQLQPKRCVLRTTIMCGVGVTAIMASLAEE 4151

Query: 266  EEVGS-------------VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQP 312
              +G+             V+++  G  + +A+T +G VY++G G    LGHG      +P
Sbjct: 4152 VPMGARSPMKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGNTDHVRRP 4211

Query: 313  RAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            + +     +G  ++ ++ G  H VA   SG V
Sbjct: 4212 KKVAAL--QGKKIISIATGSLHCVACSDSGEV 4241



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 77/280 (27%), Positives = 122/280 (43%), Gaps = 47/280 (16%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             ++S++H   I++  A N   + G++   L S+  VFS G    G LGHG       S+ 
Sbjct: 4022 LVESLQHV--IIKKVAVN---SGGKHCLALSSDGEVFSWGEGEDGKLGHGNRD----SYD 4072

Query: 156  R---INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT------NRPIFR 206
            R   I   S   VV ++    H+A +   G V T G       GH D+       R + R
Sbjct: 4073 RPKLIEALSGIGVVDIACGSAHSACITSQGHVLTWGKGRYGRLGHGDSEDQLQPKRCVLR 4132

Query: 207  --------------------------PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
                                      P  +E+L G+   +V  G  F+  LT  G V+T 
Sbjct: 4133 TTIMCGVGVTAIMASLAEEVPMGARSPMKIESLAGLGVIKVECGSQFSVALTRSGSVYTW 4192

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
            G   + +LGHG+T     PK +A L+    ++ IA G  + +A + +G V+++G      
Sbjct: 4193 GKGDYHRLGHGNTDHVRRPKKVAALQG-KKIISIATGSLHCVACSDSGEVFTWGDNDEGQ 4251

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            LG G      +PR +Q+   +G H+V+V  G  H +AL +
Sbjct: 4252 LGDGTVTAIQRPRLVQSL--QGKHIVKVICGSAHTLALST 4289



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 67/245 (27%), Positives = 112/245 (45%), Gaps = 28/245 (11%)

Query: 114  MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV------- 165
            + I+ G     ++S +  +++CG    G LG G            N P+   V       
Sbjct: 2943 IHISGGSKSLFIVSQDGKLYACGEGTNGRLGLGHNN---------NVPTPRQVPILNQYV 2993

Query: 166  ---VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR-PIFRPRLVEALKGVPCKQV 221
               V V +   HA  +   G+VF+ G+      GH   NR  + +P+L+E+L+    + +
Sbjct: 2994 VKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGH--GNRVTLEKPKLLESLRTKRIRDI 3051

Query: 222  TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG--PS 279
              G + +  +T  G ++T G   +G+LGHGD   +  PK +  L+    VVQ+A G   +
Sbjct: 3052 ACGSSHSAAITSSGELYTWGLGEYGRLGHGDNCTQLKPKLVTALQG-HRVVQVACGSRDA 3110

Query: 280  YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
              L +T  G+V+S+G G    LG G       P  ++  R  G+ VV++  G +  +AL 
Sbjct: 3111 QTLCLTEEGLVFSWGDGDFGKLGRGGSEGCSVPHQVE--RLNGVGVVQIECGAQFSLALT 3168

Query: 340  SSGYV 344
              G V
Sbjct: 3169 KIGEV 3173



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 70/227 (30%), Positives = 101/227 (44%), Gaps = 12/227 (5%)

Query: 116  ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  I++S  +++ G    G LGHG   TQ +    +       VVQV+     
Sbjct: 3051 IACGSSHSAAITSSGELYTWGLGEYGRLGHGDNCTQ-LKPKLVTALQGHRVVQVACGSRD 3109

Query: 175  AAFV--LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A  +   + G VF+ GD      G R  +     P  VE L GV   Q+  G  F+  LT
Sbjct: 3110 AQTLCLTEEGLVFSWGDGDFGKLG-RGGSEGCSVPHQVERLNGVGVVQIECGAQFSLALT 3168

Query: 233  IRGHVHTCGSNTHGQLGHGDT--LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
              G V T G   + +LGHG    + +PTP  I  L     V+ +A G  + LAVT +G V
Sbjct: 3169 KIGEVWTWGKGDYYRLGHGTDQHVRKPTP--IQGLRG-KKVIHVAVGALHCLAVTDSGQV 3225

Query: 291  YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +++G   +   G G      +P  +      G+ V RV+ G  H VA
Sbjct: 3226 FAWGDNDHGQQGSGNTVVNKKPNLVLGL--DGVFVNRVACGSSHSVA 3270



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 76/162 (46%), Gaps = 4/162 (2%)

Query: 184  VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            +F  G N     G  D +R I  P   EAL  +   Q+  G      +T  G ++  G  
Sbjct: 3946 IFGWGHNHRGQLGGLDGSR-IKMPTPCEALSLLRPIQIAGGEQTLYAVTPDGKLYATGYG 4004

Query: 244  THGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
              G+LG G T    TP  +  L+ V    V + +G  + LA++ +G V+S+G G +  LG
Sbjct: 4005 AGGRLGIGGTDSVSTPTLVESLQHVIIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLG 4064

Query: 303  HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            HG +    +P+ I+     GI VV ++ G  H   + S G+V
Sbjct: 4065 HGNRDSYDRPKLIEAL--SGIGVVDIACGSAHSACITSQGHV 4104


>gi|334346980|ref|XP_001366466.2| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Monodelphis
           domestica]
          Length = 4706

 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 70/237 (29%), Positives = 112/237 (47%), Gaps = 17/237 (7%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 169
           + G ++  L +   VFS G    G LGHG       P+    +S  +    +  HVV ++
Sbjct: 503 SDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQ----AGKHVVHIA 558

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V+ G     
Sbjct: 559 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTI-PMLVTGLKGLKVIDVSCGSGDAQ 617

Query: 230 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
            L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSVALTKD 676

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G VYS+G G N  LGHG +     P+ ++    +G  VV V+AG  H +AL     V
Sbjct: 677 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVVDVAAGSTHCLALTEDSEV 731



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 71/228 (31%), Positives = 106/228 (46%), Gaps = 7/228 (3%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+   L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3057 GRHAMALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAI 3115

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3116 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3174

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3175 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3233

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G V
Sbjct: 3234 DYFRLGHGTDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDTGQV 3279



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 68/224 (30%), Positives = 107/224 (47%), Gaps = 18/224 (8%)

Query: 130  SVFSCGSSLCGVLGHG------PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 183
             V++CG +  G LG G      P   Q  + +  N+      V V +   HA  +   G+
Sbjct: 3013 KVYACGEATNGRLGLGISSGTVPIPRQITALS--NY--VVKKVAVHSGGRHAMALTVDGK 3068

Query: 184  VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            VF+ G+      GH  +     +PRL+EALK    + +  G + +  +T  G ++T G  
Sbjct: 3069 VFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLG 3127

Query: 244  THGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFC 300
             +G+LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    
Sbjct: 3128 EYGRLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGK 3185

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            LG G       P+ I+  R  G  V ++  G +  +AL  SG V
Sbjct: 3186 LGRGGSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVV 3227



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 91/190 (47%), Gaps = 11/190 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2991 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSNYVV 3048

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L +   +  IA 
Sbjct: 3049 KKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL-KTKRIRDIAC 3107

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3108 GSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3165

Query: 335  VVALDSSGYV 344
             +AL   G V
Sbjct: 3166 TLALTDEGLV 3175



 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/187 (30%), Positives = 93/187 (49%), Gaps = 20/187 (10%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           + Q++ +E     + ++G+V+    NS       DT      P+LV+ L      ++ A 
Sbjct: 454 ITQIACAEKRFLILSRNGRVYMQAYNS-------DT----LGPQLVQGLASRNIVKIAAH 502

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V + G    G+LGHGDT+    PK I+ L  ++ G  VV IA G +
Sbjct: 503 SDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVHIACGST 562

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   D+  P  +     KG+ V+ VS  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGL--KGLKVIDVSCGSGDAQTLA 620

Query: 338 LDSSGYV 344
           +  +G V
Sbjct: 621 VTENGQV 627



 Score = 67.8 bits (164), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  I++S  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3105 IACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3163

Query: 175  AAFV--LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A  +     G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3164 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3222

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 3223 KSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDTGQVYA 3281

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3282 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3324



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/162 (30%), Positives = 78/162 (48%), Gaps = 5/162 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3019

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  + +A+T +G V+S+G G +  
Sbjct: 3020 ATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGK 3079

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            LGH  + +  +PR I+  + K I    ++ G  H  A+ SSG
Sbjct: 3080 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAAITSSG 3119



 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 83/177 (46%), Gaps = 5/177 (2%)

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS--ASENHAAFV 178
           Y   + +   +++ G    G LGHG    Q +            V+ VS  + +     V
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGL-KGLKVIDVSCGSGDAQTLAV 621

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
            ++GQV++ GD      G R  +     P+L+E L+ +   +V  G  F+  LT  G V+
Sbjct: 622 TENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVY 680

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
           + G   + +LGHG       PK +  L+    VV +AAG ++ LA+T +  V+S+GS
Sbjct: 681 SWGKGDNQRLGHGTEEHVRYPKLLEGLQG-KKVVDVAAGSTHCLALTEDSEVHSWGS 736



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 66/135 (48%), Gaps = 3/135 (2%)

Query: 207  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            P  +++L G+   +V  G  F+  LT  G V+T G   + +LGHG       P+ +  L+
Sbjct: 4060 PMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQ 4119

Query: 267  EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
                V+ IA G  + +  T +G VY++G      LG G  +   +PR +   + K I+  
Sbjct: 4120 G-KKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKIN-- 4176

Query: 327  RVSAGDEHVVALDSS 341
            RV+ G  H +A  +S
Sbjct: 4177 RVACGSAHTLAWSTS 4191



 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 65/137 (47%), Gaps = 5/137 (3%)

Query: 210  VEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE 267
            VEAL+G     +   +G   T  LT    V + G   +G+LG G +     P  I  L  
Sbjct: 4009 VEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTG 4068

Query: 268  VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR 327
            +G VV++  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ 
Sbjct: 4069 LG-VVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIA 4125

Query: 328  VSAGDEHVVALDSSGYV 344
            ++ G  H V     G V
Sbjct: 4126 IATGSLHCVCCTEDGEV 4142



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4024 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4082

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4083 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4141

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    + ++A G ++ LA
Sbjct: 4142 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKINRVACGSAHTLA 4187



 Score = 55.1 bits (131), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSV 671

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVVDVAAGSTHCLALTEDSE 730

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 731 VHSWGSNDQCQ--HFDTLRITKPEPTALPGL-DTKHIVGIACGPAQSFA 776



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122  HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 3165 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 3223

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SG V+T G    F  GH  T+  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 3224 SGVVWTWGKGDYFRLGH-GTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAW 3282

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 3283 GDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 3326


>gi|395855546|ref|XP_003800216.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Otolemur garnettii]
          Length = 5093

 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 69/233 (29%), Positives = 109/233 (46%), Gaps = 9/233 (3%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHG---PETTQCVSFTRINFPSAAHVVQVSASEN 173
           + G ++  L +   V+S G    G LGHG   P     V  T     +  HVV ++    
Sbjct: 763 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISTFSGKQAGKHVVHIACGST 822

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G      L +
Sbjct: 823 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAV 881

Query: 234 --RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
              G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +G VY
Sbjct: 882 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSIALTKDGQVY 940

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           S+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V
Sbjct: 941 SWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEV 991



 Score = 89.0 bits (219), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 73/228 (32%), Positives = 107/228 (46%), Gaps = 7/228 (3%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3317 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3375

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3376 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3434

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3435 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3493

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG V
Sbjct: 3494 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQV 3539



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 117/251 (46%), Gaps = 12/251 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4289 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4342

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       V  V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4343 VIESLRGIEVADVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4401

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4402 HRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4460

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4461 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4518

Query: 334  HVVALDSSGYV 344
            H V     G V
Sbjct: 4519 HCVCCTEDGEV 4529



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 69/221 (31%), Positives = 110/221 (49%), Gaps = 12/221 (5%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFT 186
             V++CG +  G LG G  ++  V   R     +++VV+   V +   HA  +   G+VF+
Sbjct: 3273 KVYACGEATNGRLGLG-LSSGTVPIPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFS 3331

Query: 187  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
             G+      GH  +     +PRL+EALK    + +  G + +  LT  G ++T G   +G
Sbjct: 3332 WGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 3390

Query: 247  QLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGH 303
            +LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG 
Sbjct: 3391 RLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGR 3448

Query: 304  GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            G       P+ I+  R  G  V ++  G +  +AL  SG V
Sbjct: 3449 GGSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVV 3487



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/190 (31%), Positives = 91/190 (47%), Gaps = 11/190 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR V AL     
Sbjct: 3251 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPI--PRQVTALSSYVV 3308

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L +   +  IA 
Sbjct: 3309 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL-KTKRIRDIAC 3367

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3368 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3425

Query: 335  VVALDSSGYV 344
             +AL   G V
Sbjct: 3426 TLALTDEGLV 3435



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/187 (31%), Positives = 94/187 (50%), Gaps = 20/187 (10%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 714 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 762

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 763 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISTFSGKQAGKHVVHIACGST 822

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 823 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 880

Query: 338 LDSSGYV 344
           +  +G V
Sbjct: 881 VTENGQV 887



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 99/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3365 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3423

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3424 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3482

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3483 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3541

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +     +G  + RV+ G  H VA
Sbjct: 3542 WGDNDHGQQGNGTTTVNRKPTLVHGL--EGQKITRVACGSSHSVA 3584



 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/162 (30%), Positives = 77/162 (47%), Gaps = 5/162 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 3221 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3279

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ +  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3280 ATNGRLGLGLSSGTVPIPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3339

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG
Sbjct: 3340 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSG 3379



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 82/177 (46%), Gaps = 5/177 (2%)

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA--FV 178
           Y   + +   +++ G    G LGHG    + +            V+ V+     A    V
Sbjct: 823 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAV 881

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
            ++GQV++ GD      G R  +     P+L+E L+ +   +V  G  F+  LT  G V+
Sbjct: 882 TENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 940

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
           + G   + +LGHG       PK +  L+    V+ +AAG ++ LA+T +  V+S+GS
Sbjct: 941 SWGKGDNQRLGHGTEEHVRYPKLLEGLQG-KKVIDVAAGSTHCLALTEDSEVHSWGS 996



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4411 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4469

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4470 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4528

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4529 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4574



 Score = 55.1 bits (131), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118  TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 873  SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 931

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 932  ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 990

Query: 237  VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 991  VHSWGSNDQCQ--HFDTLRVTKPEPTALPGL-DTKHIVGIACGPAQSFA 1036



 Score = 52.0 bits (123), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122  HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 3425 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 3483

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SG V+T G    F  GH  ++  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 3484 SGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3542

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 3543 GDNDHGQQGNGTTTVNRKPTLVHGLEG-QKITRVACGSSHSVAWT 3586



 Score = 45.8 bits (107), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 66/137 (48%), Gaps = 3/137 (2%)

Query: 207  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            P   EAL  +   Q+  G      +T  G ++  G    G+LG G T    TP  +  ++
Sbjct: 4235 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQ 4294

Query: 267  EVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
             V    V + +G  + LA++  G VYS+G   +  LGHG +    +PR I++ R  GI V
Sbjct: 4295 HVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLR--GIEV 4352

Query: 326  VRVSAGDEHVVALDSSG 342
              V+AG  H   + ++G
Sbjct: 4353 ADVAAGGAHSACVTAAG 4369



 Score = 40.4 bits (93), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 7/113 (6%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 4211 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4266

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G V
Sbjct: 4267 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4319


>gi|327273159|ref|XP_003221348.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Anolis
           carolinensis]
          Length = 1109

 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 75/234 (32%), Positives = 112/234 (47%), Gaps = 7/234 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 146 IHVACGESHSLALSDQGRLFSWGAGSDGQLGLT-TTEDSVAVPRLIKKLNQEMILQVSCG 204

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ F  G NS    G          P+ V++L G+P  QV AG   +  L
Sbjct: 205 NWHCLALAADGQFFAWGQNSHGQLGLGKEFPSQASPQRVKSLDGIPLAQVAAGGAHSFAL 264

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G NT GQLG  D  DR +P  +  L     VV I+ G  +   +T  G V+
Sbjct: 265 SLSGAVFGWGKNTSGQLGLSDEQDRESPCHVK-LLRTQKVVYISCGSDHTAVLTKTGGVF 323

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYV 344
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +
Sbjct: 324 TFGAGSCGQLGHDSFNDEVNPRRV--LELMGSEVSQIACGRQHTLAFVPSSGLI 375



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 64/244 (26%), Positives = 115/244 (47%), Gaps = 13/244 (5%)

Query: 102 HSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS 161
           H   + E + G      G +   L+ +  V++CG +  G LGH  E ++     +I   +
Sbjct: 91  HERSVKEVACG------GNHSIFLLEDGEVYTCGVNTKGQLGHEKEGSKP---EQIGALA 141

Query: 162 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
             H++ V+  E+H+  +   G++F+ G  S    G   T   +  PRL++ L      QV
Sbjct: 142 DQHIIHVACGESHSLALSDQGRLFSWGAGSDGQLGLTTTEDSVAVPRLIKKLNQEMILQV 201

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSY 280
           + G      L   G     G N+HGQLG G     + +P+ +  L+ +  + Q+AAG ++
Sbjct: 202 SCGNWHCLALAADGQFFAWGQNSHGQLGLGKEFPSQASPQRVKSLDGI-PLAQVAAGGAH 260

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
             A++ +G V+ +G  ++  LG  ++ D   P  ++  R +   VV +S G +H   L  
Sbjct: 261 SFALSLSGAVFGWGKNTSGQLGLSDEQDRESPCHVKLLRTQ--KVVYISCGSDHTAVLTK 318

Query: 341 SGYV 344
           +G V
Sbjct: 319 TGGV 322



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 65/194 (33%), Positives = 95/194 (48%), Gaps = 6/194 (3%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++ G +H L L ++   F+ G +  G LG G E     S  R+       + QV+A  
Sbjct: 199 LQVSCGNWHCLALAADGQFFAWGQNSHGQLGLGKEFPSQASPQRVKSLDGIPLAQVAAGG 258

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG VF  G N+S   G  D  +    P  V+ L+      ++ G + T  LT
Sbjct: 259 AHSFALSLSGAVFGWGKNTSGQLGLSD-EQDRESPCHVKLLRTQKVVYISCGSDHTAVLT 317

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGNGVV 290
             G V T G+ + GQLGH    D   P+ +  LE +GS V QIA G  + LA V  +G++
Sbjct: 318 KTGGVFTFGAGSCGQLGHDSFNDEVNPRRV--LELMGSEVSQIACGRQHTLAFVPSSGLI 375

Query: 291 YSFGSGSNFCLGHG 304
           Y+FG G    LG G
Sbjct: 376 YAFGCGIKGQLGSG 389



 Score = 71.6 bits (174), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 56/178 (31%), Positives = 88/178 (49%), Gaps = 17/178 (9%)

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPI-FRPRLVEALKGVPCKQVTAGLNFTGF 230
           EN     L+  ++   G  S    G   T +PI   PR    +     K+V  G N + F
Sbjct: 48  ENKLDDFLKGKKMLCWGYWSFGYPGTSSTVQPIILEPRTSGFIHERSVKEVACGGNHSIF 107

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVT 285
           L   G V+TCG NT GQLGH     +P        E++G+     ++ +A G S+ LA++
Sbjct: 108 LLEDGEVYTCGVNTKGQLGHEKEGSKP--------EQIGALADQHIIHVACGESHSLALS 159

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
             G ++S+G+GS+  LG     D +  PR I+   ++ I  ++VS G+ H +AL + G
Sbjct: 160 DQGRLFSWGAGSDGQLGLTTTEDSVAVPRLIKKLNQEMI--LQVSCGNWHCLALAADG 215



 Score = 51.2 bits (121), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 64/150 (42%), Gaps = 4/150 (2%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+  G  H+  +S S +VF  G +  G LG   E  +  S   +       VV +S   +
Sbjct: 253 QVAAGGAHSFALSLSGAVFGWGKNTSGQLGLSDEQDR-ESPCHVKLLRTQKVVYISCGSD 311

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFLT 232
           H A + ++G VFT G  S    GH   N  +  PR V  L G    Q+  G   T  F+ 
Sbjct: 312 HTAVLTKTGGVFTFGAGSCGQLGHDSFNDEV-NPRRVLELMGSEVSQIACGRQHTLAFVP 370

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
             G ++  G    GQLG G T +   P  +
Sbjct: 371 SSGLIYAFGCGIKGQLGSGHTCNLKCPSPV 400


>gi|139948634|ref|NP_001077132.1| probable E3 ubiquitin-protein ligase HERC3 [Bos taurus]
 gi|124829040|gb|AAI33342.1| HERC3 protein [Bos taurus]
 gi|296486686|tpg|DAA28799.1| TPA: hect domain and RLD 3 [Bos taurus]
          Length = 1050

 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/227 (28%), Positives = 108/227 (47%), Gaps = 7/227 (3%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H+V V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKP---EQIGALADQHIVHVACGESHSLAL 99

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G       +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDQGQLFSWGAGSDGQLGLMTIEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 239 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G     + +P+ +  LE +  + Q+ AG ++  A++ +G V+ +G  +
Sbjct: 160 TWGRNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVVAGGAHSFALSLSGAVFGWGMNN 218

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGV 263



 Score = 89.0 bits (219), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 72/233 (30%), Positives = 109/233 (46%), Gaps = 5/233 (2%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + +  G  H+L +S+   +FS G+   G LG             I   +   ++QVS   
Sbjct: 87  VHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTIEDSVAVPRLIQKLNQQTILQVSCGN 146

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L+
Sbjct: 147 WHCLALAADGQFFTWGRNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVVAGGAHSFALS 206

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
           + G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V++
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFT 265

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYV 344
           FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLI 316



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 51/165 (30%), Positives = 83/165 (50%), Gaps = 25/165 (15%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISPNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGVN 61

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           T GQLGH    ++P        E++G+     +V +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIVHVACGESHSLALSDQGQLFSWGAGSD 113

Query: 299 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G
Sbjct: 114 GQLGLMTIEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADG 156



 Score = 71.2 bits (173), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 64/194 (32%), Positives = 94/194 (48%), Gaps = 6/194 (3%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++ G +H L L ++   F+ G +  G LG G E     S  R+       + QV A  
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGRNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVVAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG VF  G N++   G  D  +    P  V+ L+      ++ G   T  LT
Sbjct: 200 AHSFALSLSGAVFGWGMNNAGQLGLSD-EKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGNGVV 290
             G V T G+ + GQLGH    D   P+ +  LE +GS V QIA G  + LA V  +G++
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLI 316

Query: 291 YSFGSGSNFCLGHG 304
           Y+FG G+   LG G
Sbjct: 317 YAFGCGARGQLGTG 330


>gi|307176782|gb|EFN66182.1| Probable E3 ubiquitin-protein ligase HERC2 [Camponotus floridanus]
          Length = 4802

 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/235 (31%), Positives = 109/235 (46%), Gaps = 21/235 (8%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSAS 171
            G++   L  +  VFS G    G LGHG       P+  + +   RI          ++  
Sbjct: 3057 GKHALALTQDGKVFSWGEGEDGKLGHGNNMSLDKPKLIETLKSKRIR--------DIACG 3108

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TG 229
              H+A +  +G+++T G       GH DT     RP+LV+ L G    QV  G     T 
Sbjct: 3109 SGHSAAIASNGELYTWGLGEYGRLGHGDTVTQA-RPKLVQTLVGHRVVQVACGSRDAQTM 3167

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             LT  G V++ G    G+LG G +    TP  +  L  +G VVQ+  G  + LA+T  G 
Sbjct: 3168 ALTTDGCVYSWGDGDFGKLGRGGSDGCYTPLVVERLNGLG-VVQVECGAQFSLALTKYGE 3226

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            V+++G G  F LGHG  H   +P  ++  R  G  +V V+ G  H +A+  +G V
Sbjct: 3227 VWTWGKGDYFRLGHGNDHHVRKPTLVEGLR--GKKIVHVAVGALHCLAVTDTGQV 3279



 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 74/233 (31%), Positives = 111/233 (47%), Gaps = 13/233 (5%)

Query: 119  GRYHTLLI--SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS--AAHVVQVSASENH 174
            G   TL I      +++CG    G LG G +   C     I F S      V V +   H
Sbjct: 3001 GGSKTLFIVSQEGKLYACGEGTNGRLGLGDDNNVC-EPKPIPFLSQFVIKKVAVHSGGKH 3059

Query: 175  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
            A  + Q G+VF+ G+      GH + N  + +P+L+E LK    + +  G   +  +   
Sbjct: 3060 ALALTQDGKVFSWGEGEDGKLGHGN-NMSLDKPKLIETLKSKRIRDIACGSGHSAAIASN 3118

Query: 235  GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVY 291
            G ++T G   +G+LGHGDT+ +  PK +  L  VG  VVQ+A G   +  +A+T +G VY
Sbjct: 3119 GELYTWGLGEYGRLGHGDTVTQARPKLVQTL--VGHRVVQVACGSRDAQTMALTTDGCVY 3176

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            S+G G    LG G       P  ++  R  G+ VV+V  G +  +AL   G V
Sbjct: 3177 SWGDGDFGKLGRGGSDGCYTPLVVE--RLNGLGVVQVECGAQFSLALTKYGEV 3227



 Score = 87.8 bits (216), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 68/233 (29%), Positives = 115/233 (49%), Gaps = 13/233 (5%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA---AHVVQVSASEN 173
           + G++H  L  +  V+S G+   G LGHG      VS+       A    ++V ++    
Sbjct: 516 SDGKHHLALTQDGCVYSWGNGDGGRLGHG----DTVSYDEPKLIEALLEKNIVFIACGST 571

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFL 231
           ++A +  SG+++T G  +    GH + +  +  P LV  LKG     V   +G + T  +
Sbjct: 572 YSAALSVSGELYTWGRGNYGRLGHGNFDD-VMIPTLVTTLKGHTVVHVACGSGDSQTLCV 630

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           T  G V + G   +G+LG G T    TPK +  L ++ +VV++  G  +  A+T +G VY
Sbjct: 631 TASGIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDI-NVVKVFCGSQFSAALTAHGEVY 689

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           ++G G  + LGHG +     P+ I++ R K I    +S G  H++ L    +V
Sbjct: 690 TWGKGDTYRLGHGSEEHVRYPKIIESLRDKKIK--DLSVGATHILVLTEDQFV 740



 Score = 81.6 bits (200), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 68/255 (26%), Positives = 119/255 (46%), Gaps = 20/255 (7%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSF 154
             L+S++H           + +++G  H L +S+   V+S G    G LGHG +    +S+
Sbjct: 4021 LLESIQH------VFIKKVAVSSGGKHCLALSSEGHVYSWGEGDDGKLGHGNK----MSY 4070

Query: 155  TR---INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE 211
             R   I       ++ ++   +H+A +  +G ++T G       GH D++  + RP++VE
Sbjct: 4071 DRPKLIEDLLGVEIIDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQL-RPKVVE 4129

Query: 212  ALKGVPCKQVTAGLNFTGFL--TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 269
            AL+      V  G      L  T   +V + G   +G+LG G +     P  I  L  +G
Sbjct: 4130 ALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLG 4189

Query: 270  SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
             V+++  G  + +A+T +G VY++G G    LGHG      +PR +     +G  ++ ++
Sbjct: 4190 -VIKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRKVAAL--QGKKIISIA 4246

Query: 330  AGDEHVVALDSSGYV 344
             G  H VA    G V
Sbjct: 4247 TGSLHCVACSDKGEV 4261



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/225 (30%), Positives = 107/225 (47%), Gaps = 15/225 (6%)

Query: 127  SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV----VQVSASENHAAFVLQSG 182
            ++  V+S G    G LG G   T  V    +   S  HV    V VS+   H   +   G
Sbjct: 3993 ADGKVYSTGYGAAGRLGIG--GTDSVMIPTL-LESIQHVFIKKVAVSSGGKHCLALSSEG 4049

Query: 183  QVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 241
             V++ G+      GH   N+  + RP+L+E L GV    +  G + +  +T  G ++T G
Sbjct: 4050 HVYSWGEGDDGKLGH--GNKMSYDRPKLIEDLLGVEIIDIACGGHHSAAITSAGWLYTWG 4107

Query: 242  SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLAVTGNGVVYSFGSGSNF 299
               +G+LGHGD+ D+  PK +  L++   V+ +A  +G +  L VT +  V+S+G G   
Sbjct: 4108 KGRYGRLGHGDSDDQLRPKVVEALQDY-KVIDVACGSGDAQTLCVTDDDNVWSWGDGDYG 4166

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             LG G       P  I +    G+ V++V  G +  VAL  SG V
Sbjct: 4167 KLGRGGSDGCKVPLKIDSL--AGLGVIKVECGSQFSVALTRSGAV 4209



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 93/200 (46%), Gaps = 14/200 (7%)

Query: 155  TRINFPSAAHV------VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR 208
            ++I  P  + V      + ++        V Q G+++ CG+ ++   G  D N  +  P+
Sbjct: 2980 SKIKLPVYSEVLSKLKPIHIAGGSKTLFIVSQEGKLYACGEGTNGRLGLGDDNN-VCEPK 3038

Query: 209  LVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
             +  L     K+V   +G      LT  G V + G    G+LGHG+ +    PK I  L+
Sbjct: 3039 PIPFLSQFVIKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNNMSLDKPKLIETLK 3098

Query: 267  EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
                +  IA G  +  A+  NG +Y++G G    LGHG+   + +P+ +QT    G  VV
Sbjct: 3099 S-KRIRDIACGSGHSAAIASNGELYTWGLGEYGRLGHGDTVTQARPKLVQTL--VGHRVV 3155

Query: 327  RVSAG--DEHVVALDSSGYV 344
            +V+ G  D   +AL + G V
Sbjct: 3156 QVACGSRDAQTMALTTDGCV 3175



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 97/225 (43%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS--ASE 172
            I  G  H+  I SN  +++ G    G LGHG   TQ      +       VVQV+  + +
Sbjct: 3105 IACGSGHSAAIASNGELYTWGLGEYGRLGHGDTVTQARP-KLVQTLVGHRVVQVACGSRD 3163

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
                 +   G V++ GD      G R  +   + P +VE L G+   QV  G  F+  LT
Sbjct: 3164 AQTMALTTDGCVYSWGDGDFGKLG-RGGSDGCYTPLVVERLNGLGVVQVECGAQFSLALT 3222

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG+      P  +  L     +V +A G  + LAVT  G VY+
Sbjct: 3223 KYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRG-KKIVHVAVGALHCLAVTDTGQVYA 3281

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +     +   V RVS G  H +A
Sbjct: 3282 WGDNDHGQQGNGTTSVNRKPSLVHEL--EDARVNRVSCGSSHSIA 3324



 Score = 64.3 bits (155), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 82/177 (46%), Gaps = 4/177 (2%)

Query: 167  QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
            QV+   +  A   Q   V+  G N     G    ++ I  P   E L  +    +  G  
Sbjct: 2946 QVAVQRSIDATPPQESAVYVWGLNDKDQLGGLKGSK-IKLPVYSEVLSKLKPIHIAGGSK 3004

Query: 227  FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVT 285
                ++  G ++ CG  T+G+LG GD  +   PK I  L + V   V + +G  + LA+T
Sbjct: 3005 TLFIVSQEGKLYACGEGTNGRLGLGDDNNVCEPKPIPFLSQFVIKKVAVHSGGKHALALT 3064

Query: 286  GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
             +G V+S+G G +  LGHG      +P+ I+T + K I    ++ G  H  A+ S+G
Sbjct: 3065 QDGKVFSWGEGEDGKLGHGNNMSLDKPKLIETLKSKRIR--DIACGSGHSAAIASNG 3119



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/112 (35%), Positives = 60/112 (53%), Gaps = 5/112 (4%)

Query: 235  GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV--VQIAAGPSYMLAVTGNGVVYS 292
            G ++  G N  GQLG    L+ P  K  AP E + ++  +Q+A G   + AVT +G VYS
Sbjct: 3943 GAIYGWGHNHRGQLG---GLEGPKVKLPAPCESLSALRPIQLAGGEQTLFAVTADGKVYS 3999

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             G G+   LG G     + P  +++ +   I  V VS+G +H +AL S G+V
Sbjct: 4000 TGYGAAGRLGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCLALSSEGHV 4051



 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 77/167 (46%), Gaps = 4/167 (2%)

Query: 118  TGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL +++  +V+S G    G LG G  +  C    +I+  +   V++V      + 
Sbjct: 4143 SGDAQTLCVTDDDNVWSWGDGDYGKLGRG-GSDGCKVPLKIDSLAGLGVIKVECGSQFSV 4201

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH  T+  + RPR V AL+G     +  G       + +G 
Sbjct: 4202 ALTRSGAVYTWGKGDYHRLGH-GTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGE 4260

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V T G N  GQLG G T     P+ +  L+    + ++A G ++ LA
Sbjct: 4261 VFTWGDNDEGQLGDGTTSALHRPRLVHALQG-KKITRVACGSAHTLA 4306



 Score = 48.1 bits (113), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 47/174 (27%), Positives = 78/174 (44%), Gaps = 18/174 (10%)

Query: 118 TGRYHTLLISNSS-VFSCGSSLCGVLGHG----PETTQCVS-FTRINFPSAAHVVQVSAS 171
           +G   TL ++ S  VFS G    G LG G     +T + V     IN      VV+V   
Sbjct: 622 SGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDIN------VVKVFCG 675

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
              +A +   G+V+T G   ++  GH  +   +  P+++E+L+    K ++ G      L
Sbjct: 676 SQFSAALTAHGEVYTWGKGDTYRLGH-GSEEHVRYPKIIESLRDKKIKDLSVGATHILVL 734

Query: 232 TIRGHVHTCGSNTHGQLGH--GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           T    V+  G N +GQ+    G  +  PT   + P     +V+ +A+GP+   A
Sbjct: 735 TEDQFVYGWGRNDYGQIDPTLGSVISEPT---LCPTLSSKTVIGLASGPTQSFA 785



 Score = 43.1 bits (100), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 52/110 (47%), Gaps = 5/110 (4%)

Query: 237  VHTCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
            V+  G N   QLG   G  +  P    +  L ++  +  IA G   +  V+  G +Y+ G
Sbjct: 2963 VYVWGLNDKDQLGGLKGSKIKLPVYSEV--LSKLKPI-HIAGGSKTLFIVSQEGKLYACG 3019

Query: 295  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             G+N  LG G+ ++  +P+ I    +  I  V V +G +H +AL   G V
Sbjct: 3020 EGTNGRLGLGDDNNVCEPKPIPFLSQFVIKKVAVHSGGKHALALTQDGKV 3069


>gi|195168456|ref|XP_002025047.1| GL26839 [Drosophila persimilis]
 gi|194108492|gb|EDW30535.1| GL26839 [Drosophila persimilis]
          Length = 3840

 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 74/229 (32%), Positives = 108/229 (47%), Gaps = 9/229 (3%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAF 177
            G++   L  +  VFS G    G LGHG  TT  +   R +    +  +  V+   +H+A 
Sbjct: 1928 GKHALALTLDGKVFSWGEGEDGKLGHGNRTT--LDKPRLVETLRSKKIRDVACGSSHSAA 1985

Query: 178  VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRG 235
            +   G+++T G       GH D N    +P+LV AL G    QV  G     T  LT  G
Sbjct: 1986 ISSQGELYTWGLGEYGRLGHGD-NATQLKPKLVAALAGRRVIQVACGSRDAQTLALTEDG 2044

Query: 236  HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
             V + G    G+LG G +    TP  I  L  +G V+QI  G  + LA+T  G V+++G 
Sbjct: 2045 SVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIG-VIQIECGAQFSLALTRAGEVWTWGK 2103

Query: 296  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            G  + LGHG      +P+ I   R  G  V+ V+ G  H +A+  +G V
Sbjct: 2104 GDYYRLGHGGDQHVRKPQPIGGLR--GRRVIHVAVGALHCLAVTDAGQV 2150



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 70/224 (31%), Positives = 105/224 (46%), Gaps = 15/224 (6%)

Query: 128  NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP----SAAHVVQVSASENHAAFVLQSGQ 183
            N  V++CG    G LG G   T  V       P         V V +   HA  +   G+
Sbjct: 1883 NGKVYACGEGTNGRLGLG--VTHNVPLPH-QLPVLHQYVVKKVAVHSGGKHALALTLDGK 1939

Query: 184  VFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            VF+ G+      GH   NR    +PRLVE L+    + V  G + +  ++ +G ++T G 
Sbjct: 1940 VFSWGEGEDGKLGH--GNRTTLDKPRLVETLRSKKIRDVACGSSHSAAISSQGELYTWGL 1997

Query: 243  NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFC 300
              +G+LGHGD   +  PK +A L     V+Q+A G   +  LA+T +G V+S+G G    
Sbjct: 1998 GEYGRLGHGDNATQLKPKLVAALAGR-RVIQVACGSRDAQTLALTEDGSVFSWGDGDFGK 2056

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            LG G       P  I+  R  GI V+++  G +  +AL  +G V
Sbjct: 2057 LGRGGSEGSDTPHEIE--RLSGIGVIQIECGAQFSLALTRAGEV 2098



 Score = 77.8 bits (190), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 108/238 (45%), Gaps = 14/238 (5%)

Query: 113  NMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQV 168
             + + +G  H L L +   V++ G    G LGHG      +S+ R   +   +  +V  +
Sbjct: 3066 KVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNR----MSYDRPKLVEHLNGMNVADI 3121

Query: 169  SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
            +    H+A +  SG V T G       GH D+   + RP+LVEAL G     +  G    
Sbjct: 3122 ACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQL-RPQLVEALLGYRAIDIACGSGDA 3180

Query: 229  GFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
              L I    +V + G   +G+LG G +     P  I  L  +G V+++  G  + +A+T 
Sbjct: 3181 QTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLG-VIKVECGSQFSVALTK 3239

Query: 287  NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            +G VY++  G    LGHG      +P+ +     +G  ++ ++ G  H VA   SG V
Sbjct: 3240 SGAVYTWSKGDFHRLGHGSVDHVRRPKKVAAL--QGKKIISIATGSLHCVACSDSGEV 3295



 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 67/237 (28%), Positives = 101/237 (42%), Gaps = 10/237 (4%)

Query: 106  IVET--SAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA 162
            +VET  S     +  G  H+  IS+   +++ G    G LGHG   TQ +    +   + 
Sbjct: 1964 LVETLRSKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQ-LKPKLVAALAG 2022

Query: 163  AHVVQVSASENHAA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
              V+QV+     A    + + G VF+ GD      G R  +     P  +E L G+   Q
Sbjct: 2023 RRVIQVACGSRDAQTLALTEDGSVFSWGDGDFGKLG-RGGSEGSDTPHEIERLSGIGVIQ 2081

Query: 221  VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
            +  G  F+  LT  G V T G   + +LGHG       P+ I  L     V+ +A G  +
Sbjct: 2082 IECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGR-RVIHVAVGALH 2140

Query: 281  MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             LAVT  G VY++G   +   G G      +P  +       + V RV+ G  H +A
Sbjct: 2141 CLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGL--DAVFVNRVACGSSHSIA 2195



 Score = 61.2 bits (147), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 52/175 (29%), Positives = 85/175 (48%), Gaps = 14/175 (8%)

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTI 233
             V Q+G+V+ CG+ ++   G   T N P+  P  +  L     K+V   +G      LT+
Sbjct: 1879 IVGQNGKVYACGEGTNGRLGLGVTHNVPL--PHQLPVLHQYVVKKVAVHSGGKHALALTL 1936

Query: 234  RGHVHTCGSNTHGQLGHGD--TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
             G V + G    G+LGHG+  TLD+P    +        +  +A G S+  A++  G +Y
Sbjct: 1937 DGKVFSWGEGEDGKLGHGNRTTLDKP---RLVETLRSKKIRDVACGSSHSAAISSQGELY 1993

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVVALDSSGYV 344
            ++G G    LGHG+   +L+P+ +      G  V++V+ G  D   +AL   G V
Sbjct: 1994 TWGLGEYGRLGHGDNATQLKPKLVAAL--AGRRVIQVACGSRDAQTLALTEDGSV 2046



 Score = 40.4 bits (93), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 50/111 (45%), Gaps = 7/111 (6%)

Query: 237  VHTCGSNTHGQLG--HGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            V   G N   QLG   G  +  PT  ++I+ L  +     IA G   +  V  NG VY+ 
Sbjct: 1834 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPI----HIAGGSKSLFIVGQNGKVYAC 1889

Query: 294  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            G G+N  LG G  H+   P  +    +  +  V V +G +H +AL   G V
Sbjct: 1890 GEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKV 1940


>gi|403306428|ref|XP_003943737.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Saimiri boliviensis
            boliviensis]
          Length = 4472

 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/228 (32%), Positives = 107/228 (46%), Gaps = 7/228 (3%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 2694 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 2752

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 2753 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 2811

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 2812 VFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 2870

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG V
Sbjct: 2871 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQV 2916



 Score = 88.2 bits (217), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 110/237 (46%), Gaps = 17/237 (7%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 169
           + G ++  L +   V+S G    G LGHG       P+     S  +    +  HVV ++
Sbjct: 191 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKAISAFSGKQ----AGKHVVHIA 246

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G     
Sbjct: 247 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQ 305

Query: 230 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
            L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +
Sbjct: 306 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSIALTKD 364

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V
Sbjct: 365 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEV 419



 Score = 88.2 bits (217), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 118/251 (47%), Gaps = 12/251 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG  +  C    
Sbjct: 3668 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSP-CDRPR 3721

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 3722 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 3780

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 3781 HRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPTKIDSLTGLG-VVK 3839

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 3840 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 3897

Query: 334  HVVALDSSGYV 344
            H V     G V
Sbjct: 3898 HCVCCTEDGEV 3908



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/220 (31%), Positives = 107/220 (48%), Gaps = 10/220 (4%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV--VQVSASENHAAFVLQSGQVFTC 187
             V++CG +  G LG G  +       +I   S+  V  V V +   HA  +   G+VF+ 
Sbjct: 2650 KVYACGEATNGRLGLGLSSGTVPIPRQITALSSYMVKKVAVHSGGRHATALTVDGKVFSW 2709

Query: 188  GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
            G+      GH  +     +PRL+EALK    + +  G + +  LT  G ++T G   +G+
Sbjct: 2710 GEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 2768

Query: 248  LGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGHG 304
            LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG G
Sbjct: 2769 LGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 2826

Query: 305  EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
                   P+ I+  R  G  V ++  G +  +AL  SG V
Sbjct: 2827 GSEGCNVPQNIE--RLNGQGVCQIECGAQFSLALTKSGVV 2864



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 59/187 (31%), Positives = 95/187 (50%), Gaps = 20/187 (10%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++ +E     + +SG+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 142 VTQIACAEKRFLILSRSGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 190

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK+I+    ++ G  VV IA G +
Sbjct: 191 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKAISAFSGKQAGKHVVHIACGST 250

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 251 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 308

Query: 338 LDSSGYV 344
           +  +G V
Sbjct: 309 VTENGQV 315



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 91/190 (47%), Gaps = 11/190 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2628 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPI--PRQITALSSYMV 2685

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L +   +  IA 
Sbjct: 2686 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL-KTKRIRDIAC 2744

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 2745 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 2802

Query: 335  VVALDSSGYV 344
             +AL   G V
Sbjct: 2803 TLALTDEGLV 2812



 Score = 68.2 bits (165), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 2742 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 2800

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 2801 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALT 2859

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 2860 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 2918

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 2919 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 2961



 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/162 (30%), Positives = 77/162 (47%), Gaps = 5/162 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2598 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 2656

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   +   V + +G  +  A+T +G V+S+G G +  
Sbjct: 2657 ATNGRLGLGLSSGTVPIPRQITALSSYMVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 2716

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG
Sbjct: 2717 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSG 2756



 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 82/177 (46%), Gaps = 5/177 (2%)

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA--FV 178
           Y   + +   +++ G    G LGHG    + +            V+ V+     A    V
Sbjct: 251 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAV 309

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
            ++GQV++ GD      G R  +     P+L+E L+ +   +V  G  F+  LT  G V+
Sbjct: 310 TENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 368

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
           + G   + +LGHG       PK +  L+    V+ +AAG ++ LA+T +  V+S+GS
Sbjct: 369 SWGKGDNQRLGHGTEEHVRYPKLLEGLQG-KKVIDVAAGSTHCLALTEDSEVHSWGS 424



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 51/167 (30%), Positives = 77/167 (46%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C   T+I+  +   VV+V      + 
Sbjct: 3790 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPTKIDSLTGLGVVKVECGSQFSV 3848

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 3849 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 3907

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 3908 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 3953



 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 301 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 359

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 360 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 418

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 419 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 464



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122  HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 2802 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNVPQNIERLNGQGVCQIECGAQFSLALTK 2860

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SG V+T G    F  GH  ++  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 2861 SGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 2919

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 2920 GDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 2963



 Score = 46.6 bits (109), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 67/137 (48%), Gaps = 3/137 (2%)

Query: 207  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            P   EAL  +   Q+  G      +T  G ++  G    G+LG G T    +P  +  ++
Sbjct: 3614 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSSPTLLESIQ 3673

Query: 267  EVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
             V    V + +G  + LA++  G VYS+G   +  LGHG +    +PR I++ R  GI V
Sbjct: 3674 HVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSPCDRPRVIESLR--GIEV 3731

Query: 326  VRVSAGDEHVVALDSSG 342
            V V+AG  H   + ++G
Sbjct: 3732 VDVAAGGAHSACVTAAG 3748



 Score = 41.2 bits (95), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 7/113 (6%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3590 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 3645

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G V
Sbjct: 3646 ATGYGAGGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 3698


>gi|296203907|ref|XP_002806938.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like, partial [Callithrix jacchus]
          Length = 4774

 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/228 (32%), Positives = 107/228 (46%), Gaps = 7/228 (3%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 2996 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 3054

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3055 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3113

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3114 VFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3172

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG V
Sbjct: 3173 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQV 3218



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 118/251 (47%), Gaps = 12/251 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG  +  C    
Sbjct: 3970 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSP-CDRPR 4023

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4024 VIESLRGVEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4082

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4083 HRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4141

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4142 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4199

Query: 334  HVVALDSSGYV 344
            H V     G V
Sbjct: 4200 HCVCCTEDGEV 4210



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/220 (31%), Positives = 107/220 (48%), Gaps = 10/220 (4%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV--VQVSASENHAAFVLQSGQVFTC 187
             V++CG +  G LG G  +       +I   S+  V  V V +   HA  +   G+VF+ 
Sbjct: 2952 KVYACGEATNGRLGLGISSGTVPIPRQITALSSYMVKKVAVHSGGRHATALTVDGKVFSW 3011

Query: 188  GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
            G+      GH  +     +PRL+EALK    + +  G + +  LT  G ++T G   +G+
Sbjct: 3012 GEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3070

Query: 248  LGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGHG 304
            LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG G
Sbjct: 3071 LGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3128

Query: 305  EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
                   P+ I+  R  G  V ++  G +  +AL  SG V
Sbjct: 3129 GSEGCNVPQNIE--RLNGQGVCQIECGAQFSLALTKSGVV 3166



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 64/238 (26%), Positives = 107/238 (44%), Gaps = 19/238 (7%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 169
           + G ++  L +   V+S G    G LGHG       P+     S  +    +  HVV ++
Sbjct: 433 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AGKHVVHIA 488

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
               ++A +   G+++T G  +     H R     I    ++  L        + G+ F 
Sbjct: 489 CGSTYSAAITAEGELYTWGRGNYXRLDHGRSAMNEILI--MISGLDRQKFIYKSCGIRFA 546

Query: 229 GFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
             L     G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T 
Sbjct: 547 QTLAFYENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSIALTK 605

Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V
Sbjct: 606 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEV 661



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 91/190 (47%), Gaps = 11/190 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2930 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYMV 2987

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L +   +  IA 
Sbjct: 2988 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL-KTKRIRDIAC 3046

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3047 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3104

Query: 335  VVALDSSGYV 344
             +AL   G V
Sbjct: 3105 TLALTDEGLV 3114



 Score = 68.2 bits (165), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3044 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3102

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3103 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALT 3161

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3162 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3220

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3221 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3263



 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/162 (30%), Positives = 77/162 (47%), Gaps = 5/162 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2900 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 2958

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   +   V + +G  +  A+T +G V+S+G G +  
Sbjct: 2959 ATNGRLGLGISSGTVPIPRQITALSSYMVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3018

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG
Sbjct: 3019 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSG 3058



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4092 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4150

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4151 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4209

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4210 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4255



 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/158 (31%), Positives = 70/158 (44%), Gaps = 7/158 (4%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           N  V+S G    G LG G  +  C +   I       VV+V      +  + + GQV++ 
Sbjct: 554 NGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSW 612

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G   +   GH  T   +  P+L+E L+G     V AG      LT    VH+ GSN   Q
Sbjct: 613 GKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 671

Query: 248 LGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
             H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 672 --HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 706



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 62/116 (53%), Gaps = 2/116 (1%)

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
           ++GQV++ GD      G R  +     P+L+E L+ +   +V  G  F+  LT  G V++
Sbjct: 553 ENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYS 611

Query: 240 CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
            G   + +LGHG       PK +  L+    V+ +AAG ++ LA+T +  V+S+GS
Sbjct: 612 WGKGDNQRLGHGTEEHVRYPKLLEGLQG-KKVIDVAAGSTHCLALTEDSEVHSWGS 666



 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122  HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 3104 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNVPQNIERLNGQGVCQIECGAQFSLALTK 3162

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SG V+T G    F  GH  ++  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 3163 SGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3221

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 3222 GDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 3265



 Score = 45.8 bits (107), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 67/137 (48%), Gaps = 3/137 (2%)

Query: 207  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            P   EAL  +   Q+  G      +T  G ++  G    G+LG G T    +P  +  ++
Sbjct: 3916 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSSPTLLESIQ 3975

Query: 267  EVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
             V    V + +G  + LA++  G VYS+G   +  LGHG +    +PR I++ R  G+ V
Sbjct: 3976 HVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSPCDRPRVIESLR--GVEV 4033

Query: 326  VRVSAGDEHVVALDSSG 342
            V V+AG  H   + ++G
Sbjct: 4034 VDVAAGGAHSACVTAAG 4050



 Score = 41.2 bits (95), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 7/113 (6%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3892 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 3947

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G V
Sbjct: 3948 ATGYGAGGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4000


>gi|444516740|gb|ELV11273.1| E3 ubiquitin-protein ligase HERC2 [Tupaia chinensis]
          Length = 3151

 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/228 (32%), Positives = 108/228 (47%), Gaps = 7/228 (3%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 1361 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 1419

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH DT   + +P++V+ L G    QV  G     T  LT  G 
Sbjct: 1420 TSSGELYTWGLGEYGRLGHGDTTTQL-KPKMVKVLLGHRVVQVACGSRDAQTLALTDEGL 1478

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 1479 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 1537

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG V
Sbjct: 1538 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQV 1583



 Score = 84.3 bits (207), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 76/254 (29%), Positives = 117/254 (46%), Gaps = 18/254 (7%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 2338 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-SRSPCDRPR 2391

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 2392 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 2450

Query: 216  -----VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 270
                 + C    +G   T  LT    V + G   +G+LG G +     P  I  L  +G 
Sbjct: 2451 HRVVGIACG---SGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG- 2506

Query: 271  VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
            VV++  G  + +A+T  G VY++G G    LGHG      +PR +Q    +G   + ++ 
Sbjct: 2507 VVRVECGSQFSVALTKAGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKAIAIAT 2564

Query: 331  GDEHVVALDSSGYV 344
            G  H V     G V
Sbjct: 2565 GSLHCVCCTEDGEV 2578



 Score = 81.6 bits (200), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 71/220 (32%), Positives = 111/220 (50%), Gaps = 12/220 (5%)

Query: 131  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFTC 187
            V++CG +  G LG G  ++  V   R     +++VV+   V +   HA  +   G+VF+ 
Sbjct: 1318 VYACGEATNGRLGLG-LSSGTVPLPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSW 1376

Query: 188  GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
            G+      GH  +     +PRL+EALK    + +  G + +  LT  G ++T G   +G+
Sbjct: 1377 GEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 1435

Query: 248  LGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGHG 304
            LGHGDT  +  PK +  L  +G  VVQ+A G   +  LA+T  G+V+S+G G    LG G
Sbjct: 1436 LGHGDTTTQLKPKMVKVL--LGHRVVQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 1493

Query: 305  EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
                   P+ I+  R  G  V ++  G +  +AL  SG V
Sbjct: 1494 GSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVV 1531



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/188 (30%), Positives = 93/188 (49%), Gaps = 7/188 (3%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
            SA +VVQV+        V   G+V+ CG+ ++   G   ++  +  PR V AL     K+
Sbjct: 1295 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPLPRQVTALSSYVVKK 1354

Query: 221  VT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
            V   +G      LT+ G V + G    G+LGH   ++   P+ I  L +   +  IA G 
Sbjct: 1355 VAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL-KTKRIRDIACGS 1413

Query: 279  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVV 336
            S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  VV+V+ G  D   +
Sbjct: 1414 SHSAALTSSGELYTWGLGEYGRLGHGDTTTQLKPKMVKVLL--GHRVVQVACGSRDAQTL 1471

Query: 337  ALDSSGYV 344
            AL   G V
Sbjct: 1472 ALTDEGLV 1479



 Score = 67.4 bits (163), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 67/226 (29%), Positives = 100/226 (44%), Gaps = 8/226 (3%)

Query: 115  QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
             I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       VVQV+    
Sbjct: 1408 DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDTTTQ-LKPKMVKVLLGHRVVQVACGSR 1466

Query: 174  HAA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  L
Sbjct: 1467 DAQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 1525

Query: 232  TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            T  G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY
Sbjct: 1526 TKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVY 1584

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            ++G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 1585 AWGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 1628



 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 44/138 (31%), Positives = 68/138 (49%), Gaps = 4/138 (2%)

Query: 207  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPL 265
            P   E L  +   QV  G      +T+ G V+ CG  T+G+LG G  +   P P+ +  L
Sbjct: 1288 PSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPLPRQVTAL 1347

Query: 266  EE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
               V   V + +G  +  A+T +G V+S+G G +  LGH  + +  +PR I+  + K I 
Sbjct: 1348 SSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIR 1407

Query: 325  VVRVSAGDEHVVALDSSG 342
               ++ G  H  AL SSG
Sbjct: 1408 --DIACGSSHSAALTSSG 1423



 Score = 54.7 bits (130), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 2460 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVRVECGSQFSV 2518

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + ++G V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 2519 ALTKAGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKAIAIATGSLHCVCCTEDGE 2577

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 2578 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 2623



 Score = 52.0 bits (123), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122  HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 1469 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 1527

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SG V+T G    F  GH  ++  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 1528 SGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 1586

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 1587 GDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 1630



 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 67/137 (48%), Gaps = 3/137 (2%)

Query: 207  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            P   EAL  +   Q+  G      +T  G ++  G    G+LG G T    TP  +  ++
Sbjct: 2284 PTPCEALAALRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQ 2343

Query: 267  EVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
             V    V + +G  + LA++  G VYS+G   +  LGHG +    +PR I++ R  GI V
Sbjct: 2344 HVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSPCDRPRVIESLR--GIEV 2401

Query: 326  VRVSAGDEHVVALDSSG 342
            V V+AG  H   + ++G
Sbjct: 2402 VDVAAGGAHSACVTAAG 2418



 Score = 41.2 bits (95), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 7/113 (6%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 2260 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPV----QLIGGEQTLFAVTADGKLY 2315

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G V
Sbjct: 2316 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 2368


>gi|354489070|ref|XP_003506687.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Cricetulus griseus]
          Length = 4836

 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/228 (32%), Positives = 107/228 (46%), Gaps = 7/228 (3%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3057 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 3115

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3116 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3174

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3175 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3233

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG V
Sbjct: 3234 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQV 3279



 Score = 87.8 bits (216), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 118/251 (47%), Gaps = 12/251 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4032 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4085

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4086 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4144

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4145 HRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4203

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4204 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4261

Query: 334  HVVALDSSGYV 344
            H V     G V
Sbjct: 4262 HCVCCTEDGEV 4272



 Score = 87.8 bits (216), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 67/237 (28%), Positives = 110/237 (46%), Gaps = 17/237 (7%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 169
           + G ++  L +   V+S G    G LGHG       P+     S  +    +  HVV ++
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AGKHVVHIA 558

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G     
Sbjct: 559 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQ 617

Query: 230 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
            L +   G V + G   +G+LG G +    TPK I  L+++  V+++  G  + +A+T +
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVIKVRCGSQFSIALTKD 676

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V
Sbjct: 677 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEV 731



 Score = 81.3 bits (199), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 70/221 (31%), Positives = 110/221 (49%), Gaps = 12/221 (5%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFT 186
             V+SCG +  G LG G  ++  V   R     +++VV+   V +   HA  +   G+VF+
Sbjct: 3013 KVYSCGEATNGRLGLG-MSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3071

Query: 187  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
             G+      GH  +     +PRL+EALK    + +  G + +  LT  G ++T G   +G
Sbjct: 3072 WGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 3130

Query: 247  QLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGH 303
            +LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG 
Sbjct: 3131 RLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGR 3188

Query: 304  GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            G       P+ I+  R  G  V ++  G +  +AL  SG V
Sbjct: 3189 GGSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVV 3227



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 57/187 (30%), Positives = 94/187 (50%), Gaps = 20/187 (10%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V+QV+ +E     + ++G+V+T   NS            +  P+LV+ L      ++ A 
Sbjct: 454 VMQVACAEKRFLILSRNGRVYTQAYNSD-----------MLAPQLVQGLASRNIVKIAAH 502

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 620

Query: 338 LDSSGYV 344
           +  +G V
Sbjct: 621 VTENGQV 627



 Score = 74.7 bits (182), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 92/190 (48%), Gaps = 11/190 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V++CG+  N     G      PI  PR + AL     
Sbjct: 2991 SALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPI--PRQITALSSYVV 3048

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L +   +  IA 
Sbjct: 3049 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL-KTKRIRDIAC 3107

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3108 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3165

Query: 335  VVALDSSGYV 344
             +AL   G V
Sbjct: 3166 TLALTDEGLV 3175



 Score = 68.2 bits (165), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3105 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3163

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3164 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3222

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3223 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3281

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3282 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3324



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 78/162 (48%), Gaps = 5/162 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V++CG 
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGE 3019

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3020 ATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3079

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG
Sbjct: 3080 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSG 3119



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 82/177 (46%), Gaps = 5/177 (2%)

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA--FV 178
           Y   + +   +++ G    G LGHG    + +            V+ V+     A    V
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAV 621

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
            ++GQV++ GD      G R  +     P+L+E L+ +   +V  G  F+  LT  G V+
Sbjct: 622 TENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVY 680

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
           + G   + +LGHG       PK +  L+    V+ +AAG ++ LA+T +  V+S+GS
Sbjct: 681 SWGKGDNQRLGHGTEEHVRYPKLLEGLQG-KKVIDVAAGSTHCLALTEDSEVHSWGS 736



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4154 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4212

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4213 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4271

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4272 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4317



 Score = 54.7 bits (130), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       V++V      + 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVIKVRCGSQFSI 671

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 731 VHSWGSNDQCQ--HFDTLRVTKPEPTALPGL-DTKHIVGIACGPAQSFA 776



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122  HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 3165 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 3223

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SG V+T G    F  GH  ++  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 3224 SGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3282

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 3283 GDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 3326



 Score = 48.1 bits (113), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 67/137 (48%), Gaps = 3/137 (2%)

Query: 207  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            P   EAL  +   Q+  G      +T  G ++  G    G+LG G T    TP  +  ++
Sbjct: 3978 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQ 4037

Query: 267  EVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
             V    V + +G  + LA++  G VYS+G   +  LGHG +    +PR I++ R  GI V
Sbjct: 4038 HVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLR--GIEV 4095

Query: 326  VRVSAGDEHVVALDSSG 342
            V V+AG  H   + ++G
Sbjct: 4096 VDVAAGGAHSACVTAAG 4112



 Score = 41.2 bits (95), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 7/113 (6%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3954 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4009

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G V
Sbjct: 4010 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4062


>gi|157127963|ref|XP_001661249.1| hect E3 ubiquitin ligase [Aedes aegypti]
 gi|108882309|gb|EAT46534.1| AAEL002306-PA [Aedes aegypti]
          Length = 4837

 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 74/228 (32%), Positives = 105/228 (46%), Gaps = 7/228 (3%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            G++   L  +  VFS G    G LGHG   T       I       V  ++   +H+A +
Sbjct: 2988 GKHAMALTLDGKVFSWGEGEDGKLGHGNRLT-LEKPKLIESLRTKRVRDIACGSSHSAAI 3046

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P+LV  L+G    QV  G     T  LT  G 
Sbjct: 3047 TSSGELYTWGLGEYGRLGHGD-NCTQLKPKLVTTLQGHRVVQVACGSRDAQTLCLTEEGL 3105

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P  +  L  VG V+QI  G  + LA+T +G V+++G G
Sbjct: 3106 VFSWGDGDFGKLGRGGSEGCSVPHQVERLNSVG-VMQIECGAQFSLALTKSGEVWTWGKG 3164

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              + LGHG      +P  IQ  R  G  V+ V+ G  H +A+  SG V
Sbjct: 3165 DYYRLGHGTDQHVRKPTPIQGLR--GKKVIHVAVGALHCLAVTDSGQV 3210



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 70/243 (28%), Positives = 105/243 (43%), Gaps = 20/243 (8%)

Query: 111 AGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPE-TTQCV------SFTRINFPSAA 163
           AGN      +  +  I      SC   + G +      TTQ +      S   I  PS  
Sbjct: 464 AGNYSTKVNKSKSQKIFTLGWSSCSPEMYGFMSEATNGTTQLMGSIPRYSAATIELPSTL 523

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
            V QV+ +EN+   +   GQVF+   NSS              P+  E L+GV   Q+ A
Sbjct: 524 QVRQVACTENNIYILTTGGQVFSLHSNSSENIA----------PKAFEGLEGVHVVQIAA 573

Query: 224 GL--NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
                    L+    V + G+   G+LGHGDT+ +  P  I  L E   V  I  G SY 
Sbjct: 574 HCEGKHVMVLSSANEVWSWGAGDGGRLGHGDTVSKEHPTMIVGLHE-KQVCGIYCGASYS 632

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
            A+T  G ++++G G+   LGHG   D+L P  +Q  +   +  V + +GD H + +  +
Sbjct: 633 AAITIAGELFTWGRGTYGRLGHGNSDDKLVPTQVQALKSYKVVDVALGSGDAHSMCVTDN 692

Query: 342 GYV 344
           G +
Sbjct: 693 GLL 695



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 117/254 (46%), Gaps = 18/254 (7%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             ++S++H   I++  A N   + G++   L S+  VFS G    G LGHG       S+ 
Sbjct: 4015 LVESLQHV--IIKKVAVN---SGGKHCLALSSDGEVFSWGEGEDGKLGHGNRD----SYD 4065

Query: 156  R---INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA 212
            R   I   S   V+ ++    H+A +   G V T G       GH D+   + +P+LVEA
Sbjct: 4066 RPKLIEALSGIGVIDIACGSAHSACITSQGHVLTWGKGRYGRLGHGDSEDQL-QPKLVEA 4124

Query: 213  LKGVPCKQVTAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 270
            L G     +  G      L I    +V + G   +G+LG G +     P  I  L  +G 
Sbjct: 4125 LLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLG- 4183

Query: 271  VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
            V+++  G  + +A+T +G VY++G G    LGHG      +P+ +     +G  ++ ++ 
Sbjct: 4184 VIKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGNTDHVRRPKKVAAL--QGKKIISIAT 4241

Query: 331  GDEHVVALDSSGYV 344
            G  H VA   SG V
Sbjct: 4242 GSLHCVACSDSGEV 4255



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 60/202 (29%), Positives = 94/202 (46%), Gaps = 18/202 (8%)

Query: 155  TRINFPSAAHV------VQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFR 206
            +++  P+ + V      + ++        V Q G+++ CG+  N     GH   N  +  
Sbjct: 2911 SKVKLPTYSSVLSQLKPIHIAGGSKSLFIVSQDGKLYACGEGTNGRLGLGH---NNNVPT 2967

Query: 207  PRLVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            PR V  L     K+V   +G      LT+ G V + G    G+LGHG+ L    PK I  
Sbjct: 2968 PRQVPILNQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLTLEKPKLIES 3027

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L     V  IA G S+  A+T +G +Y++G G    LGHG+   +L+P+ + T   +G  
Sbjct: 3028 LR-TKRVRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNCTQLKPKLVTTL--QGHR 3084

Query: 325  VVRVSAG--DEHVVALDSSGYV 344
            VV+V+ G  D   + L   G V
Sbjct: 3085 VVQVACGSRDAQTLCLTEEGLV 3106



 Score = 68.6 bits (166), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 62/226 (27%), Positives = 106/226 (46%), Gaps = 9/226 (3%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G++  +L S + V+S G+   G LGHG +T      T I       V  +    +++A +
Sbjct: 577 GKHVMVLSSANEVWSWGAGDGGRLGHG-DTVSKEHPTMIVGLHEKQVCGIYCGASYSAAI 635

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIRGH 236
             +G++FT G  +    GH +++  +  P  V+ALK      V   +G   +  +T  G 
Sbjct: 636 TIAGELFTWGRGTYGRLGHGNSDDKLV-PTQVQALKSYKVVDVALGSGDAHSMCVTDNGL 694

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           +   G    G+LG+G     P P  I  L  V    +I +G  + +A++ +G +Y++G G
Sbjct: 695 LFAWGDGDFGKLGNGSCNGSPIPVQIDTLVNVS---RIYSGSQFSVALSCDGTLYTWGKG 751

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
               LGHG       P+ ++    +G  +  V+ G  H +AL SSG
Sbjct: 752 HGGRLGHGNSEHSNVPKLVRAL--EGKKIADVAVGSAHCLALTSSG 795



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 68/225 (30%), Positives = 96/225 (42%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  I++S  +++ G    G LGHG   TQ +    +       VVQV+     
Sbjct: 3036 IACGSSHSAAITSSGELYTWGLGEYGRLGHGDNCTQ-LKPKLVTTLQGHRVVQVACGSRD 3094

Query: 175  AAFV--LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A  +   + G VF+ GD      G R  +     P  VE L  V   Q+  G  F+  LT
Sbjct: 3095 AQTLCLTEEGLVFSWGDGDFGKLG-RGGSEGCSVPHQVERLNSVGVMQIECGAQFSLALT 3153

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG       P  I  L     V+ +A G  + LAVT +G VY+
Sbjct: 3154 KSGEVWTWGKGDYYRLGHGTDQHVRKPTPIQGLRG-KKVIHVAVGALHCLAVTDSGQVYA 3212

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G G      +P  +      G+ V RV+ G  H VA
Sbjct: 3213 WGDNDHGQQGSGNTVVNKKPNLVLGL--DGVFVNRVACGSSHSVA 3255



 Score = 47.8 bits (112), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 75/162 (46%), Gaps = 4/162 (2%)

Query: 184  VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            +F  G N     G  D +R I  P   EAL  +   Q+  G      +T  G ++  G  
Sbjct: 3939 IFGWGHNHRGQLGGLDGSR-IKMPTPCEALSLLRPIQIAGGEQTLYAVTPDGKLYATGYG 3997

Query: 244  THGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
              G+LG G T     P  +  L+ V    V + +G  + LA++ +G V+S+G G +  LG
Sbjct: 3998 AGGRLGIGGTDSVSAPTLVESLQHVIIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLG 4057

Query: 303  HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            HG +    +P+ I+     GI V+ ++ G  H   + S G+V
Sbjct: 4058 HGNRDSYDRPKLIEAL--SGIGVIDIACGSAHSACITSQGHV 4097



 Score = 39.7 bits (91), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 71/153 (46%), Gaps = 16/153 (10%)

Query: 197  HRDTN--RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG--HGD 252
            H D N   P +  +L++     P        ++ G  TI G     G N  GQLG   G 
Sbjct: 3904 HEDHNYFTPQYDSQLLQWFNRRP---EDWAFSWGGASTIFG----WGHNHRGQLGGLDGS 3956

Query: 253  TLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ 311
             +  PTP ++++ L  +    QIA G   + AVT +G +Y+ G G+   LG G       
Sbjct: 3957 RIKMPTPCEALSLLRPI----QIAGGEQTLYAVTPDGKLYATGYGAGGRLGIGGTDSVSA 4012

Query: 312  PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            P  +++ +   I  V V++G +H +AL S G V
Sbjct: 4013 PTLVESLQHVIIKKVAVNSGGKHCLALSSDGEV 4045


>gi|60360320|dbj|BAD90404.1| mKIAA0393 protein [Mus musculus]
          Length = 1871

 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/228 (32%), Positives = 107/228 (46%), Gaps = 7/228 (3%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 92  GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 150

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
             SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 151 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 209

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 210 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 268

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG V
Sbjct: 269 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQV 314



 Score = 88.6 bits (218), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 118/251 (47%), Gaps = 12/251 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 1067 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAKDGKLGHG-NRSPCDRPR 1120

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 1121 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 1179

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 1180 HRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 1238

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 1239 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 1296

Query: 334  HVVALDSSGYV 344
            H V     G V
Sbjct: 1297 HCVCCTEDGEV 1307



 Score = 81.3 bits (199), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 70/220 (31%), Positives = 110/220 (50%), Gaps = 12/220 (5%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFTC 187
           V+SCG +  G LG G  ++  V   R     +++VV+   V +   HA  +   G+VF+ 
Sbjct: 49  VYSCGEATNGRLGLG-MSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSW 107

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G+      GH  +     +PRL+EALK    + +  G + +  LT  G ++T G   +G+
Sbjct: 108 GEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 166

Query: 248 LGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGHG 304
           LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG G
Sbjct: 167 LGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 224

Query: 305 EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
                  P+ I+  R  G  V ++  G +  +AL  SG V
Sbjct: 225 GSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVV 262



 Score = 74.3 bits (181), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 92/190 (48%), Gaps = 11/190 (5%)

Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
           SA +VVQV+        V   G+V++CG+  N     G      PI  PR + AL     
Sbjct: 26  SALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPI--PRQITALSSYVV 83

Query: 219 KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
           K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L +   +  IA 
Sbjct: 84  KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL-KTKRIRDIAC 142

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
           G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 143 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 200

Query: 335 VVALDSSGYV 344
            +AL   G V
Sbjct: 201 TLALTDEGLV 210



 Score = 68.6 bits (166), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 100/226 (44%), Gaps = 8/226 (3%)

Query: 115 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+    
Sbjct: 139 DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSR 197

Query: 174 HAA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  L
Sbjct: 198 DAQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 256

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           T  G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY
Sbjct: 257 TKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVY 315

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           ++G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 316 AWGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 359



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/138 (32%), Positives = 69/138 (50%), Gaps = 4/138 (2%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPL 265
           P   E L  +   QV  G      +T+ G V++CG  T+G+LG G  +   P P+ I  L
Sbjct: 19  PSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITAL 78

Query: 266 EE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
              V   V + +G  +  A+T +G V+S+G G +  LGH  + +  +PR I+  + K I 
Sbjct: 79  SSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIR 138

Query: 325 VVRVSAGDEHVVALDSSG 342
              ++ G  H  AL SSG
Sbjct: 139 --DIACGSSHSAALTSSG 154



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 1189 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 1247

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 1248 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 1306

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 1307 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 1352



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122 HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 200 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 258

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           SG V+T G    F  GH  ++  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 259 SGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 317

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
           G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 318 GDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 361



 Score = 47.8 bits (112), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 67/137 (48%), Gaps = 3/137 (2%)

Query: 207  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            P   EAL  +   Q+  G      +T  G ++  G    G+LG G T    TP  +  ++
Sbjct: 1013 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQ 1072

Query: 267  EVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
             V    V + +G  + LA++  G VYS+G   +  LGHG +    +PR I++ R  GI V
Sbjct: 1073 HVFIKKVAVNSGGKHCLALSSEGEVYSWGEAKDGKLGHGNRSPCDRPRVIESLR--GIEV 1130

Query: 326  VRVSAGDEHVVALDSSG 342
            V V+AG  H   + ++G
Sbjct: 1131 VDVAAGGAHSACVTAAG 1147



 Score = 40.8 bits (94), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 7/113 (6%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 989  GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 1044

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G V
Sbjct: 1045 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 1097


>gi|297839563|ref|XP_002887663.1| zinc finger protein [Arabidopsis lyrata subsp. lyrata]
 gi|297333504|gb|EFH63922.1| zinc finger protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1103

 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/177 (33%), Positives = 89/177 (50%), Gaps = 6/177 (3%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++    HAAFV + G++FT G+ S    GH    + +F PRLVE+L         A 
Sbjct: 283 VHQIACGVRHAAFVTRQGEIFTWGEESGGRLGH-GIGKDVFHPRLVESLTATSSVDFVAC 341

Query: 225 LNF-TGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
             F T  +T+ G ++T G  TH  G LGHG  +    PK IA   E   V  +  GP + 
Sbjct: 342 GEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGCLEGLHVASVTCGPWHT 401

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             +T  G +++FG G+   LGHG++     PR +++    G+  + VS G  H  A+
Sbjct: 402 ALITSYGRLFTFGDGTFGVLGHGDRETVQYPREVESL--SGLRTIAVSCGVWHTAAV 456



 Score = 87.8 bits (216), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 76/244 (31%), Positives = 113/244 (46%), Gaps = 20/244 (8%)

Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           +T G +HT LI S   +F+ G    GVLGHG   T  V + R +   S    + VS    
Sbjct: 394 VTCGPWHTALITSYGRLFTFGDGTFGVLGHGDRET--VQYPREVESLSGLRTIAVSCGVW 451

Query: 174 HAAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
           H A V++            SG++FT GD      GH D + P  +P  V AL      ++
Sbjct: 452 HTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKD-PRLKPTCVPALIDYNFHKI 510

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
             G + T  LT  G V T GS  +GQLG+  T D   P  +        V +I+ G  ++
Sbjct: 511 ACGHSLTVGLTTSGQVFTMGSTVYGQLGNLQT-DGKLPCLVEDKLASEFVEEISCGAYHV 569

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
            A+T    VY++G G+N  LGHG+  D   P  ++  + +  HV  ++ G  +  A+   
Sbjct: 570 AALTSRNEVYTWGKGANGRLGHGDLEDRKVPTLVEALKDR--HVKYIACGSNYTAAICLH 627

Query: 342 GYVS 345
            +VS
Sbjct: 628 KWVS 631



 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 69/145 (47%), Gaps = 3/145 (2%)

Query: 200 TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP 259
           T   +  P+ +E+   +   Q+  G+    F+T +G + T G  + G+LGHG   D   P
Sbjct: 265 TRTDVLVPKPLESNIVLDVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDVFHP 324

Query: 260 KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQT 317
           + +  L    SV  +A G  +  AVT  G +Y++G G++    LGHG       P+ I  
Sbjct: 325 RLVESLTATSSVDFVACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAG 384

Query: 318 FRRKGIHVVRVSAGDEHVVALDSSG 342
              +G+HV  V+ G  H   + S G
Sbjct: 385 C-LEGLHVASVTCGPWHTALITSYG 408


>gi|403263471|ref|XP_003924055.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Saimiri boliviensis
           boliviensis]
          Length = 1024

 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 70/205 (34%), Positives = 101/205 (49%), Gaps = 4/205 (1%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QIT G YH+L +S    +F+ G +L G LG G +     +   +   S   + Q+SA E
Sbjct: 141 IQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLSGIPLAQISAGE 200

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +++ G N     G  D       P L+EAL     + +  G + T  LT
Sbjct: 201 AHSMALSMSGNIYSWGKNEFGQLG-LDHTESKDSPSLIEALDNQKVEFLACGGSHTALLT 259

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA-VTGNGVVY 291
             G + T G+  HGQLGH  T +   P  +A L     V QIA G  + LA V+  G V+
Sbjct: 260 QDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELAG-NRVTQIACGRWHTLAYVSDLGKVF 318

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQ 316
           SFGSG    LG+G   D+L P  ++
Sbjct: 319 SFGSGKEGQLGNGGTRDQLIPLPMK 343



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/198 (26%), Positives = 96/198 (48%), Gaps = 6/198 (3%)

Query: 143 GHGPETTQCVSFTRINFPS---AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRD 199
           G  P      S   + F S      ++Q++  + H+  + + G++F  G N     G   
Sbjct: 115 GGKPFEYDNYSMKHLRFESILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGR 174

Query: 200 TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP 259
                  P++VE L G+P  Q++AG   +  L++ G++++ G N  GQLG   T  + +P
Sbjct: 175 KFPSTTTPQIVEHLSGIPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLDHTESKDSP 234

Query: 260 KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
             I  L+    V  +A G S+   +T +G++++FG+G +  LGH    +EL+P  +    
Sbjct: 235 SLIEALDN-QKVEFLACGGSHTALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAEL- 292

Query: 320 RKGIHVVRVSAGDEHVVA 337
             G  V +++ G  H +A
Sbjct: 293 -AGNRVTQIACGRWHTLA 309


>gi|431917309|gb|ELK16842.1| Putative E3 ubiquitin-protein ligase HERC2 [Pteropus alecto]
          Length = 3660

 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/228 (31%), Positives = 109/228 (47%), Gaps = 7/228 (3%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L ++  VFS G    G LGH      C     I    +  +  ++   +H+A +
Sbjct: 1891 GRHATALTADGKVFSWGEGDDGKLGHF-SRXNCDKPRLIEALKSRRIRDIACGSSHSAAL 1949

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 1950 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLVGHRVVQVACGSRDAQTLALTDEGL 2008

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 2009 VFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 2067

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G V
Sbjct: 2068 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDAGQV 2113



 Score = 85.5 bits (210), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 118/251 (47%), Gaps = 12/251 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 2866 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 2919

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 2920 VIESLRGIEVVDVAAGGAHSACVTAAGGLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 2978

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 V   +G   T  LT    V + G   +G+LG G +     P  +  L  +G+V +
Sbjct: 2979 HRVVDVACGSGDAQTLCLTEDDTVWSWGDGDYGKLGRGGSDGCKVPMKVDALTGLGAV-K 3037

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 3038 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 3095

Query: 334  HVVALDSSGYV 344
            H V     G V
Sbjct: 3096 HCVCCTEDGEV 3106



 Score = 81.6 bits (200), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 71/221 (32%), Positives = 110/221 (49%), Gaps = 12/221 (5%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFT 186
             V++CG +  G LG G  ++  V   R     +++VV+   V +   HA  +   G+VF+
Sbjct: 1847 KVYACGEATNGRLGLG-VSSGTVPVPRQVTALSSYVVKKVAVHSGGRHATALTADGKVFS 1905

Query: 187  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
             G+      GH  +     +PRL+EALK    + +  G + +  LT  G ++T G   +G
Sbjct: 1906 WGEGDDGKLGHF-SRXNCDKPRLIEALKSRRIRDIACGSSHSAALTSSGELYTWGLGEYG 1964

Query: 247  QLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGH 303
            +LGHGD   +  PK +  L  VG  VVQ+A G   +  LA+T  G+V+S+G G    LG 
Sbjct: 1965 RLGHGDNTTQLKPKMVKVL--VGHRVVQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGR 2022

Query: 304  GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            G       P+ I+  R  G  V ++  G +  +AL  SG V
Sbjct: 2023 GGSEGCNVPQNIE--RLNGQGVCQIECGAQFSLALTKSGVV 2061



 Score = 68.2 bits (165), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 57/188 (30%), Positives = 90/188 (47%), Gaps = 7/188 (3%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
            SA + VQV+        V   G+V+ CG+ ++   G   ++  +  PR V AL     K+
Sbjct: 1825 SALNAVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGVSSGTVPVPRQVTALSSYVVKK 1884

Query: 221  VT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
            V   +G      LT  G V + G    G+LGH    +   P+ I  L+    +  IA G 
Sbjct: 1885 VAVHSGGRHATALTADGKVFSWGEGDDGKLGHFSRXNCDKPRLIEALKS-RRIRDIACGS 1943

Query: 279  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVV 336
            S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  VV+V+ G  D   +
Sbjct: 1944 SHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVL--VGHRVVQVACGSRDAQTL 2001

Query: 337  ALDSSGYV 344
            AL   G V
Sbjct: 2002 ALTDEGLV 2009



 Score = 68.2 bits (165), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 99/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       VVQV+     
Sbjct: 1939 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLVGHRVVQVACGSRD 1997

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 1998 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALT 2056

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 2057 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDAGQVYA 2115

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 2116 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 2158



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 77/162 (47%), Gaps = 5/162 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 1795 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNAVQVAGGSKSLFAVTVEGKVYACGE 1853

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ +  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 1854 ATNGRLGLGVSSGTVPVPRQVTALSSYVVKKVAVHSGGRHATALTADGKVFSWGEGDDGK 1913

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            LGH  + +  +PR I+  + + I    ++ G  H  AL SSG
Sbjct: 1914 LGHFSRXNCDKPRLIEALKSRRIR--DIACGSSHSAALTSSG 1953



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 75/167 (44%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +++  +    V+V      + 
Sbjct: 2988 SGDAQTLCLTEDDTVWSWGDGDYGKLGRG-GSDGCKVPMKVDALTGLGAVKVECGSQFSV 3046

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 3047 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 3105

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 3106 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 3151



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122  HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 1999 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNVPQNIERLNGQGVCQIECGAQFSLALTK 2057

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SG V+T G    F  GH  ++  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 2058 SGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAW 2116

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 2117 GDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 2160



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 67/137 (48%), Gaps = 3/137 (2%)

Query: 207  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            P   EAL  +   Q+  G      +T  G ++  G    G+LG G T    TP  +  ++
Sbjct: 2812 PTPCEALAALRPAQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQ 2871

Query: 267  EVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
             V    V + +G  + LA++  G VYS+G   +  LGHG +    +PR I++ R  GI V
Sbjct: 2872 HVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLR--GIEV 2929

Query: 326  VRVSAGDEHVVALDSSG 342
            V V+AG  H   + ++G
Sbjct: 2930 VDVAAGGAHSACVTAAG 2946


>gi|428184654|gb|EKX53509.1| hypothetical protein GUITHDRAFT_64398, partial [Guillardia theta
           CCMP2712]
          Length = 279

 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 104/211 (49%), Gaps = 6/211 (2%)

Query: 132 FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNS 191
           +  G +LC  LGHG    +      I       V+QV+    H + +  SGQ+++ G   
Sbjct: 2   WGTGFNLC--LGHGSHANEKYP-KPIKSLKEKGVIQVAVGPQHCSALCSSGQIYSWGIGL 58

Query: 192 SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG 251
           +   GH +         L    K     Q+  G   + +LT  G +++ G   +G+LG+G
Sbjct: 59  NGRLGHGNIQDSSAPKMLASTKKNCTAVQIACGAAHSAYLTQDGKLYSWGRGLNGELGNG 118

Query: 252 DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ 311
           +  D+ TP  +  L ++  V  +A G +   A TG G+++S+GSG + CLG G++ D L+
Sbjct: 119 ERHDQWTPNLVLRLRDL-VVSYVACGTNTTFACTGGGLLFSWGSGKHGCLGLGDREDRLE 177

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           P  ++   R+   ++RV+ G+ H +AL   G
Sbjct: 178 PSLVRL--REEDRIIRVACGEHHCLALTEDG 206



 Score = 81.6 bits (200), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 68/236 (28%), Positives = 106/236 (44%), Gaps = 9/236 (3%)

Query: 112 GNMQITTGRYH-TLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
           G +Q+  G  H + L S+  ++S G  L G LGHG            +       VQ++ 
Sbjct: 31  GVIQVAVGPQHCSALCSSGQIYSWGIGLNGRLGHGNIQDSSAPKMLASTKKNCTAVQIAC 90

Query: 171 SENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
              H+A++ Q G++++ G   N     G R      + P LV  L+ +    V  G N T
Sbjct: 91  GAAHSAYLTQDGKLYSWGRGLNGELGNGERHDQ---WTPNLVLRLRDLVVSYVACGTNTT 147

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
              T  G + + GS  HG LG GD  DR  P S+  L E   ++++A G  + LA+T +G
Sbjct: 148 FACTGGGLLFSWGSGKHGCLGLGDREDRLEP-SLVRLREEDRIIRVACGEHHCLALTEDG 206

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            ++ +G G+  C G G   + L P  +     + I  V +S G  H   L   G +
Sbjct: 207 KLWGWGRGTGGCHGLGHTSEVLSPHKLPMPEDRTI--VSMSCGRWHSAYLTIRGDI 260



 Score = 48.5 bits (114), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 35/53 (66%), Gaps = 2/53 (3%)

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           S+G+G N CLGHG   +E  P+ I++ + KG  V++V+ G +H  AL SSG +
Sbjct: 1   SWGTGFNLCLGHGSHANEKYPKPIKSLKEKG--VIQVAVGPQHCSALCSSGQI 51


>gi|426378407|ref|XP_004055918.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like, partial [Gorilla gorilla gorilla]
          Length = 4586

 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/228 (32%), Positives = 107/228 (46%), Gaps = 7/228 (3%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 2808 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 2866

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 2867 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 2925

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 2926 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 2984

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG V
Sbjct: 2985 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQV 3030



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 118/251 (47%), Gaps = 12/251 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 3782 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 3835

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 3836 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 3894

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 3895 HRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 3953

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 3954 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4011

Query: 334  HVVALDSSGYV 344
            H V     G V
Sbjct: 4012 HCVCCTEDGEV 4022



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 67/237 (28%), Positives = 109/237 (45%), Gaps = 17/237 (7%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 169
           + G ++  L +   V+S G      LGHG       P+     S  +    +  HVV ++
Sbjct: 479 SDGHHYLALAATGEVYSWGCGDGRRLGHGDTVPLEEPKVISAFSGKQ----AGKHVVHIA 534

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G     
Sbjct: 535 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQ 593

Query: 230 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
            L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +
Sbjct: 594 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSIALTKD 652

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V
Sbjct: 653 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEV 707



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/221 (31%), Positives = 110/221 (49%), Gaps = 12/221 (5%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFT 186
             V++CG +  G LG G  ++  V   R     +++VV+   V +   HA  +   G+VF+
Sbjct: 2764 KVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 2822

Query: 187  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
             G+      GH  +     +PRL+EALK    + +  G + +  LT  G ++T G   +G
Sbjct: 2823 WGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 2881

Query: 247  QLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGH 303
            +LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG 
Sbjct: 2882 RLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGR 2939

Query: 304  GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            G       P+ I+  R  G  V ++  G +  +AL  SG V
Sbjct: 2940 GGSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVV 2978



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 91/190 (47%), Gaps = 11/190 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2742 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 2799

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L +   +  IA 
Sbjct: 2800 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL-KTKRIRDIAC 2858

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 2859 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 2916

Query: 335  VVALDSSGYV 344
             +AL   G V
Sbjct: 2917 TLALTDEGLV 2926



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/187 (31%), Positives = 92/187 (49%), Gaps = 20/187 (10%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++ +E     V ++G+V T   NS       DT      P+LV+ L      ++ A 
Sbjct: 430 VTQIACAEKRLLIVXRNGRVXTQAYNS-------DT----LVPQLVQGLASRNVVKIAAH 478

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G     +LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 479 SDGHHYLALAATGEVYSWGCGDGRRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 538

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 539 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 596

Query: 338 LDSSGYV 344
           +  +G V
Sbjct: 597 VTENGQV 603



 Score = 68.2 bits (165), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 2856 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 2914

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 2915 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 2973

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 2974 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3032

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3033 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3075



 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 77/162 (47%), Gaps = 5/162 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2712 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 2770

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 2771 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 2830

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG
Sbjct: 2831 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSG 2870



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 82/177 (46%), Gaps = 5/177 (2%)

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA--FV 178
           Y   + +   +++ G    G LGHG    + +            V+ V+     A    V
Sbjct: 539 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAV 597

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
            ++GQV++ GD      G R  +     P+L+E L+ +   +V  G  F+  LT  G V+
Sbjct: 598 TENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 656

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
           + G   + +LGHG       PK +  L+    V+ +AAG ++ LA+T +  V+S+GS
Sbjct: 657 SWGKGDNQRLGHGTEEHVRYPKLLEGLQG-KKVIDVAAGSTHCLALTEDSEVHSWGS 712



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 3904 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 3962

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 3963 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4021

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4022 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4067



 Score = 54.7 bits (130), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 51/165 (30%), Positives = 75/165 (45%), Gaps = 8/165 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 589 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 647

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 648 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 706

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPS 279
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+
Sbjct: 707 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPA 748



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122  HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 2916 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 2974

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SG V+T G    F  GH  ++  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 2975 SGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3033

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 3034 GDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 3077



 Score = 47.8 bits (112), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 67/137 (48%), Gaps = 3/137 (2%)

Query: 207  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            P   EAL  +   Q+  G      +T  G ++  G    G+LG G T    TP  +  ++
Sbjct: 3728 PTPCEALATLRPVQLIGGEQTLLAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQ 3787

Query: 267  EVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
             V    V + +G  + LA++  G VYS+G   +  LGHG +    +PR I++ R  GI V
Sbjct: 3788 HVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLR--GIEV 3845

Query: 326  VRVSAGDEHVVALDSSG 342
            V V+AG  H   + ++G
Sbjct: 3846 VDVAAGGAHSACVTAAG 3862



 Score = 42.7 bits (99), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 58/113 (51%), Gaps = 7/113 (6%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   +LAVT +G +Y
Sbjct: 3704 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLLAVTADGKLY 3759

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G V
Sbjct: 3760 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 3812


>gi|410349247|gb|JAA41227.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/228 (32%), Positives = 107/228 (46%), Gaps = 7/228 (3%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3056 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3114

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3115 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3173

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3174 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3232

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG V
Sbjct: 3233 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQV 3278



 Score = 88.2 bits (217), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 110/237 (46%), Gaps = 17/237 (7%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 169
           + G ++  L +   V+S G    G LGHG       P+     S  +    +  HVV ++
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AGKHVVHIA 557

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G     
Sbjct: 558 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQ 616

Query: 230 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
            L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +
Sbjct: 617 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSIALTKD 675

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V
Sbjct: 676 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEV 730



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 118/251 (47%), Gaps = 12/251 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4030 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4083

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4084 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4142

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4143 HRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4201

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4202 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4259

Query: 334  HVVALDSSGYV 344
            H V     G V
Sbjct: 4260 HCVCCTEDGEV 4270



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/221 (31%), Positives = 110/221 (49%), Gaps = 12/221 (5%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFT 186
             V++CG +  G LG G  ++  V   R     +++VV+   V +   HA  +   G+VF+
Sbjct: 3012 KVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3070

Query: 187  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
             G+      GH  +     +PRL+EALK    + +  G + +  LT  G ++T G   +G
Sbjct: 3071 WGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 3129

Query: 247  QLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGH 303
            +LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG 
Sbjct: 3130 RLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGR 3187

Query: 304  GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            G       P+ I+  R  G  V ++  G +  +AL  SG V
Sbjct: 3188 GGSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVV 3226



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/187 (31%), Positives = 94/187 (50%), Gaps = 20/187 (10%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 501

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 561

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 562 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 619

Query: 338 LDSSGYV 344
           +  +G V
Sbjct: 620 VTENGQV 626



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 91/190 (47%), Gaps = 11/190 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2990 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3047

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L +   +  IA 
Sbjct: 3048 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL-KTKRIRDIAC 3106

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3107 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3164

Query: 335  VVALDSSGYV 344
             +AL   G V
Sbjct: 3165 TLALTDEGLV 3174



 Score = 68.2 bits (165), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3104 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3162

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3163 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3221

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3222 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3280

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3281 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3323



 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 77/162 (47%), Gaps = 5/162 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2960 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3018

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3019 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3078

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG
Sbjct: 3079 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSG 3118



 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 82/177 (46%), Gaps = 5/177 (2%)

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA--FV 178
           Y   + +   +++ G    G LGHG    + +            V+ V+     A    V
Sbjct: 562 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAV 620

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
            ++GQV++ GD      G R  +     P+L+E L+ +   +V  G  F+  LT  G V+
Sbjct: 621 TENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 679

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
           + G   + +LGHG       PK +  L+    V+ +AAG ++ LA+T +  V+S+GS
Sbjct: 680 SWGKGDNQRLGHGTEEHVRYPKLLEGLQG-KKVIDVAAGSTHCLALTEDSEVHSWGS 735



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4152 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4210

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4211 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4269

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4270 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4315



 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 730 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 775



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122  HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 3164 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 3222

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SG V+T G    F  GH  ++  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 3223 SGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3281

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 3282 GDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 3325



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 67/137 (48%), Gaps = 3/137 (2%)

Query: 207  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            P   EAL  +   Q+  G      +T  G ++  G    G+LG G T    TP  +  ++
Sbjct: 3976 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQ 4035

Query: 267  EVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
             V    V + +G  + LA++  G VYS+G   +  LGHG +    +PR I++ R  GI V
Sbjct: 4036 HVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLR--GIEV 4093

Query: 326  VRVSAGDEHVVALDSSG 342
            V V+AG  H   + ++G
Sbjct: 4094 VDVAAGGAHSACVTAAG 4110



 Score = 41.2 bits (95), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 7/113 (6%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4007

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G V
Sbjct: 4008 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4060


>gi|195399111|ref|XP_002058164.1| GJ15642 [Drosophila virilis]
 gi|194150588|gb|EDW66272.1| GJ15642 [Drosophila virilis]
          Length = 5062

 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 108/229 (47%), Gaps = 9/229 (3%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAF 177
            G++   L  +  VFS G    G LGHG  +T  +   R +    A  +  ++   +H+A 
Sbjct: 3141 GKHALALTLDGKVFSWGEGEDGKLGHGNRST--LDKPRLVEALRAKKIRDIACGSSHSAA 3198

Query: 178  VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRG 235
            +   G+++T G       GH D N    +P+LV AL G    QV  G     T  LT  G
Sbjct: 3199 ISSQGELYTWGLGEYGRLGHGD-NATQLKPKLVTALHGRRVIQVACGSRDAQTLALTEDG 3257

Query: 236  HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
             V + G    G+LG G +    TP  I  L  +G V+QI  G  + LA+T  G V+++G 
Sbjct: 3258 AVFSWGDGDFGKLGRGGSEGSATPHEIERLSGIG-VIQIECGAQFSLALTRAGEVWTWGK 3316

Query: 296  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            G  + LGHG      +P+ I   R  G  V+ V+ G  H +A+  +G V
Sbjct: 3317 GDYYRLGHGGDQHVRKPQPIAGLR--GRRVIHVAVGALHCLAVTDAGQV 3363



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/222 (29%), Positives = 106/222 (47%), Gaps = 11/222 (4%)

Query: 128  NSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSASENHAAFVLQSGQV 184
            +  V++CG    G LG G   T  V       +        V V +   HA  +   G+V
Sbjct: 3096 DGKVYACGEGTNGRLGLG--VTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKV 3153

Query: 185  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
            F+ G+      GH + +  + +PRLVEAL+    + +  G + +  ++ +G ++T G   
Sbjct: 3154 FSWGEGEDGKLGHGNRST-LDKPRLVEALRAKKIRDIACGSSHSAAISSQGELYTWGLGE 3212

Query: 245  HGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLG 302
            +G+LGHGD   +  PK +  L     V+Q+A G   +  LA+T +G V+S+G G    LG
Sbjct: 3213 YGRLGHGDNATQLKPKLVTALHG-RRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLG 3271

Query: 303  HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             G       P  I+  R  GI V+++  G +  +AL  +G V
Sbjct: 3272 RGGSEGSATPHEIE--RLSGIGVIQIECGAQFSLALTRAGEV 3311



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 55/181 (30%), Positives = 88/181 (48%), Gaps = 6/181 (3%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAG 224
            V V++   H   +   G+V+  G+      GH   NR  + RP+L+E L G+    +  G
Sbjct: 4289 VAVNSGGKHCLALTTDGEVYAWGEGEDGKLGH--GNRMSYDRPKLLEHLNGMSVADIACG 4346

Query: 225  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLA 283
               +  +T  GHV T G   +G+LGHGD+ D+  PK +  L    ++ +   +G +  L 
Sbjct: 4347 SAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLC 4406

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I++    G+ V++V  G +  VAL  SG 
Sbjct: 4407 ITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESL--AGLGVIKVECGSQFSVALTKSGA 4464

Query: 344  V 344
            V
Sbjct: 4465 V 4465



 Score = 68.6 bits (166), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 73/284 (25%), Positives = 112/284 (39%), Gaps = 66/284 (23%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSAS 171
            + +G  H L L ++  V++ G    G LGHG      +S+ R   +   +   V  ++  
Sbjct: 4291 VNSGGKHCLALTTDGEVYAWGEGEDGKLGHGNR----MSYDRPKLLEHLNGMSVADIACG 4346

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG---------------- 215
              H+A +  SG V T G       GH D+   + RP+LVEAL G                
Sbjct: 4347 SAHSAAITASGHVLTWGKGRYGRLGHGDSEDQL-RPKLVEALLGYRAIDIACGSGDAQTL 4405

Query: 216  ----------------------------VPCK----------QVTAGLNFTGFLTIRGHV 237
                                        +P K          +V  G  F+  LT  G V
Sbjct: 4406 CITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAV 4465

Query: 238  HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            +T G     +LGHG       PK +A L+    ++ IA G  + +A +  G VY++G   
Sbjct: 4466 YTWGKGDFHRLGHGSVDHVRRPKKVAALQG-KKIISIATGSLHCVACSDAGEVYTWGDND 4524

Query: 298  NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
               LG G      +PR +     +G H+V+V+ G  H +AL +S
Sbjct: 4525 EGQLGDGTVTAIQRPRLVAAL--QGKHIVKVTCGSAHTLALSTS 4566



 Score = 67.8 bits (164), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 50/164 (30%), Positives = 86/164 (52%), Gaps = 13/164 (7%)

Query: 185 FTCGDNSSFCCGHRDTNR---PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 241
           ++ G   S   GH D +    P     LV  ++ V C     G +++  +T+RG+++T G
Sbjct: 639 YSWGVGDSRRLGHGDCHARELPTKIESLVRRVQSVYC-----GCSYSAAITLRGNLYTWG 693

Query: 242 SNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LGHG++ D+  P  +  L++   + V + +G ++ L +T  G+VY++G G    
Sbjct: 694 RGTYGRLGHGNSDDQCMPAMVMALKDHQVLDVALGSGDAHTLCLTRGGLVYAWGDGDYGK 753

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           LG+G  +  LQP  I+   R    V RV AG +  +AL   G +
Sbjct: 754 LGNGSCNSSLQPLLIECLPR----VQRVFAGSQFSLALTCEGQL 793



 Score = 65.1 bits (157), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 98/228 (42%), Gaps = 14/228 (6%)

Query: 116  ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH---VVQVSAS 171
            I  G  H+  IS+   +++ G    G LGHG   TQ     +    +A H   V+QV+  
Sbjct: 3189 IACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQL----KPKLVTALHGRRVIQVACG 3244

Query: 172  ENHAA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
               A    + + G VF+ GD      G R  +     P  +E L G+   Q+  G  F+ 
Sbjct: 3245 SRDAQTLALTEDGAVFSWGDGDFGKLG-RGGSEGSATPHEIERLSGIGVIQIECGAQFSL 3303

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             LT  G V T G   + +LGHG       P+ IA L     V+ +A G  + LAVT  G 
Sbjct: 3304 ALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIAGLRG-RRVIHVAVGALHCLAVTDAGQ 3362

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            VY++G   +   G G      +P  +       + V RV+ G  H +A
Sbjct: 3363 VYAWGDNDHGQQGSGNTFVNKKPALVIGL--DAVFVNRVACGSSHSMA 3408



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 107/239 (44%), Gaps = 30/239 (12%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHG-----PETTQCVSFTRINFPSAAHVVQVSASEN 173
           GR+   + SN + +S G      LGHG        T+  S  R        V  V    +
Sbjct: 626 GRHFLAVDSNHNAYSWGVGDSRRLGHGDCHARELPTKIESLVR-------RVQSVYCGCS 678

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFL 231
           ++A +   G ++T G  +    GH +++     P +V ALK      V   +G   T  L
Sbjct: 679 YSAAITLRGNLYTWGRGTYGRLGHGNSDDQCM-PAMVMALKDHQVLDVALGSGDAHTLCL 737

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGNGV 289
           T  G V+  G   +G+LG+G         S+ PL  E +  V ++ AG  + LA+T  G 
Sbjct: 738 TRGGLVYAWGDGDYGKLGNGS-----CNSSLQPLLIECLPRVQRVFAGSQFSLALTCEGQ 792

Query: 290 VYSFGSGSNFCLGHGEQHDELQ----PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           +YS+G  S  CLGH      +Q    PR I + + K   +V V+ G  H +AL S+G +
Sbjct: 793 LYSWGKAS--CLGHQLVERNVQGCSVPRLITSLQHK--RIVHVAVGVAHCLALSSNGEI 847



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 80/185 (43%), Gaps = 17/185 (9%)

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
            + QV+ SE+    + Q G+++           +    +P   P+L++  +      V+ 
Sbjct: 572 QLKQVACSEDMVVLLCQEGKLY-----------NWPIAKPETEPQLLDFAEIANETFVSI 620

Query: 224 GLNFTG--FLTIRGH--VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
             +  G  FL +  +   ++ G     +LGHGD   R  P  I  L  V  V  +  G S
Sbjct: 621 AAHCEGRHFLAVDSNHNAYSWGVGDSRRLGHGDCHARELPTKIESL--VRRVQSVYCGCS 678

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
           Y  A+T  G +Y++G G+   LGHG   D+  P  +   +   +  V + +GD H + L 
Sbjct: 679 YSAAITLRGNLYTWGRGTYGRLGHGNSDDQCMPAMVMALKDHQVLDVALGSGDAHTLCLT 738

Query: 340 SSGYV 344
             G V
Sbjct: 739 RGGLV 743



 Score = 50.8 bits (120), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 46/182 (25%), Positives = 78/182 (42%), Gaps = 7/182 (3%)

Query: 102  HSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS 161
            H   +++ + G+    T      L  + +VFS G    G LG G           I   S
Sbjct: 3234 HGRRVIQVACGSRDAQT----LALTEDGAVFSWGDGDFGKLGRGGSEGSATPH-EIERLS 3288

Query: 162  AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
               V+Q+      +  + ++G+V+T G    +  GH   ++ + +P+ +  L+G     V
Sbjct: 3289 GIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGH-GGDQHVRKPQPIAGLRGRRVIHV 3347

Query: 222  TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
              G      +T  G V+  G N HGQ G G+T     P  +  L+ V  V ++A G S+ 
Sbjct: 3348 AVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAV-FVNRVACGSSHS 3406

Query: 282  LA 283
            +A
Sbjct: 3407 MA 3408



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 46/184 (25%), Positives = 84/184 (45%), Gaps = 13/184 (7%)

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV-VQVSASENHAAFVL 179
           Y   +    ++++ G    G LGHG    QC+    +       + V + + + H   + 
Sbjct: 679 YSAAITLRGNLYTWGRGTYGRLGHGNSDDQCMPAMVMALKDHQVLDVALGSGDAHTLCLT 738

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
           + G V+  GD      G+   N  + +P L+E L  V  ++V AG  F+  LT  G +++
Sbjct: 739 RGGLVYAWGDGDYGKLGNGSCNSSL-QPLLIECLPRV--QRVFAGSQFSLALTCEGQLYS 795

Query: 240 CGSNTHGQLGHGDTLDR-----PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
            G  +   LGH   ++R       P+ I  L+    +V +A G ++ LA++ NG ++ +G
Sbjct: 796 WGKASC--LGH-QLVERNVQGCSVPRLITSLQH-KRIVHVAVGVAHCLALSSNGEIFGWG 851

Query: 295 SGSN 298
              N
Sbjct: 852 RNDN 855


>gi|4079809|gb|AAD08657.1| HERC2 [Homo sapiens]
          Length = 4834

 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/228 (32%), Positives = 107/228 (46%), Gaps = 7/228 (3%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3056 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3114

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3115 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3173

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3174 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3232

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG V
Sbjct: 3233 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQV 3278



 Score = 88.2 bits (217), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 110/237 (46%), Gaps = 17/237 (7%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 169
           + G ++  L +   V+S G    G LGHG       P+     S  +    +  HVV ++
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AGKHVVHIA 557

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G     
Sbjct: 558 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQ 616

Query: 230 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
            L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +
Sbjct: 617 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSIALTKD 675

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V
Sbjct: 676 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEV 730



 Score = 87.8 bits (216), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 118/251 (47%), Gaps = 12/251 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4030 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4083

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4084 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4142

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4143 HRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4201

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4202 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4259

Query: 334  HVVALDSSGYV 344
            H V     G V
Sbjct: 4260 HCVCCTEDGEV 4270



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/221 (31%), Positives = 110/221 (49%), Gaps = 12/221 (5%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFT 186
             V++CG +  G LG G  ++  V   R     +++VV+   V +   HA  +   G+VF+
Sbjct: 3012 KVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3070

Query: 187  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
             G+      GH  +     +PRL+EALK    + +  G + +  LT  G ++T G   +G
Sbjct: 3071 WGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 3129

Query: 247  QLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGH 303
            +LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG 
Sbjct: 3130 RLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGR 3187

Query: 304  GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            G       P+ I+  R  G  V ++  G +  +AL  SG V
Sbjct: 3188 GGSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVV 3226



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/187 (31%), Positives = 94/187 (50%), Gaps = 20/187 (10%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 501

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 561

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 562 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 619

Query: 338 LDSSGYV 344
           +  +G V
Sbjct: 620 VTENGQV 626



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 91/190 (47%), Gaps = 11/190 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2990 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3047

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L +   +  IA 
Sbjct: 3048 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL-KTKRIRDIAC 3106

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3107 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3164

Query: 335  VVALDSSGYV 344
             +AL   G V
Sbjct: 3165 TLALTDEGLV 3174



 Score = 68.2 bits (165), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3104 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3162

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3163 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3221

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3222 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3280

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3281 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3323



 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 77/162 (47%), Gaps = 5/162 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2960 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3018

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3019 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3078

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG
Sbjct: 3079 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSG 3118



 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 82/177 (46%), Gaps = 5/177 (2%)

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA--FV 178
           Y   + +   +++ G    G LGHG    + +            V+ V+     A    V
Sbjct: 562 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAV 620

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
            ++GQV++ GD      G R  +     P+L+E L+ +   +V  G  F+  LT  G V+
Sbjct: 621 TENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 679

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
           + G   + +LGHG       PK +  L+    V+ +AAG ++ LA+T +  V+S+GS
Sbjct: 680 SWGKGDNQRLGHGTEEHVRYPKLLEGLQG-KKVIDVAAGSTHCLALTEDSEVHSWGS 735



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4152 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4210

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4211 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4269

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4270 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4315



 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 730 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 775



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122  HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 3164 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 3222

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SG V+T G    F  GH  ++  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 3223 SGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3281

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 3282 GDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 3325



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 67/137 (48%), Gaps = 3/137 (2%)

Query: 207  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            P   EAL  +   Q+  G      +T  G ++  G    G+LG G T    TP  +  ++
Sbjct: 3976 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQ 4035

Query: 267  EVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
             V    V + +G  + LA++  G VYS+G   +  LGHG +    +PR I++ R  GI V
Sbjct: 4036 HVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLR--GIEV 4093

Query: 326  VRVSAGDEHVVALDSSG 342
            V V+AG  H   + ++G
Sbjct: 4094 VDVAAGGAHSACVTAAG 4110



 Score = 41.2 bits (95), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 7/113 (6%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4007

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G V
Sbjct: 4008 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4060


>gi|410223230|gb|JAA08834.1| hect domain and RLD 2 [Pan troglodytes]
 gi|410304312|gb|JAA30756.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/228 (32%), Positives = 107/228 (46%), Gaps = 7/228 (3%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3056 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3114

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3115 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3173

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3174 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3232

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG V
Sbjct: 3233 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQV 3278



 Score = 88.2 bits (217), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 110/237 (46%), Gaps = 17/237 (7%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 169
           + G ++  L +   V+S G    G LGHG       P+     S  +    +  HVV ++
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AGKHVVHIA 557

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G     
Sbjct: 558 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQ 616

Query: 230 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
            L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +
Sbjct: 617 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSIALTKD 675

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V
Sbjct: 676 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEV 730



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 118/251 (47%), Gaps = 12/251 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4030 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4083

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4084 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4142

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4143 HRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4201

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4202 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4259

Query: 334  HVVALDSSGYV 344
            H V     G V
Sbjct: 4260 HCVCCTEDGEV 4270



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/221 (31%), Positives = 110/221 (49%), Gaps = 12/221 (5%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFT 186
             V++CG +  G LG G  ++  V   R     +++VV+   V +   HA  +   G+VF+
Sbjct: 3012 KVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3070

Query: 187  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
             G+      GH  +     +PRL+EALK    + +  G + +  LT  G ++T G   +G
Sbjct: 3071 WGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 3129

Query: 247  QLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGH 303
            +LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG 
Sbjct: 3130 RLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGR 3187

Query: 304  GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            G       P+ I+  R  G  V ++  G +  +AL  SG V
Sbjct: 3188 GGSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVV 3226



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/187 (31%), Positives = 94/187 (50%), Gaps = 20/187 (10%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 501

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 561

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 562 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 619

Query: 338 LDSSGYV 344
           +  +G V
Sbjct: 620 VTENGQV 626



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 91/190 (47%), Gaps = 11/190 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2990 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3047

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L +   +  IA 
Sbjct: 3048 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL-KTKRIRDIAC 3106

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3107 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3164

Query: 335  VVALDSSGYV 344
             +AL   G V
Sbjct: 3165 TLALTDEGLV 3174



 Score = 68.2 bits (165), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3104 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3162

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3163 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3221

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3222 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3280

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3281 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3323



 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 77/162 (47%), Gaps = 5/162 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2960 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3018

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3019 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3078

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG
Sbjct: 3079 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSG 3118



 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 82/177 (46%), Gaps = 5/177 (2%)

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA--FV 178
           Y   + +   +++ G    G LGHG    + +            V+ V+     A    V
Sbjct: 562 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAV 620

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
            ++GQV++ GD      G R  +     P+L+E L+ +   +V  G  F+  LT  G V+
Sbjct: 621 TENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 679

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
           + G   + +LGHG       PK +  L+    V+ +AAG ++ LA+T +  V+S+GS
Sbjct: 680 SWGKGDNQRLGHGTEEHVRYPKLLEGLQG-KKVIDVAAGSTHCLALTEDSEVHSWGS 735



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4152 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4210

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4211 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4269

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4270 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4315



 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 730 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 775



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122  HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 3164 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 3222

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SG V+T G    F  GH  ++  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 3223 SGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3281

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 3282 GDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 3325



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 67/137 (48%), Gaps = 3/137 (2%)

Query: 207  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            P   EAL  +   Q+  G      +T  G ++  G    G+LG G T    TP  +  ++
Sbjct: 3976 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQ 4035

Query: 267  EVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
             V    V + +G  + LA++  G VYS+G   +  LGHG +    +PR I++ R  GI V
Sbjct: 4036 HVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLR--GIEV 4093

Query: 326  VRVSAGDEHVVALDSSG 342
            V V+AG  H   + ++G
Sbjct: 4094 VDVAAGGAHSACVTAAG 4110



 Score = 41.2 bits (95), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 7/113 (6%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4007

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G V
Sbjct: 4008 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4060


>gi|417405688|gb|JAA49548.1| Putative e3 ubiquitin-protein ligase herc4 [Desmodus rotundus]
          Length = 1049

 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 78/253 (30%), Positives = 123/253 (48%), Gaps = 12/253 (4%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCG-HRDTNRPIFRPRLVEA 212
            R I   S   +VQV+    H+  + ++ +VF+ G N     G   D N+    P+L+++
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFSWGQNKYGQLGLGIDCNKQA-SPQLIKS 186

Query: 213 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
           L G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V
Sbjct: 187 LTGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL-RTQKIV 245

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
            I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G 
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGR 303

Query: 333 EHVVA-LDSSGYV 344
           +H  A + SSG +
Sbjct: 304 QHTSAFVPSSGRI 316



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 121/251 (48%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIVQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VFS G +  G LG G +  +  S   I   +    +QV+A   H+  +  SG +F  
Sbjct: 155 ASEVFSWGQNKYGQLGLGIDCNKQASPQLIKSLTGIPFMQVAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342



 Score = 81.3 bits (199), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 108/226 (47%), Gaps = 7/226 (3%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V +
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFS 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCNKQASPQLIKSLTGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGV 263



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 64/213 (30%), Positives = 98/213 (46%), Gaps = 9/213 (4%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+S+G      LG G + + +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFSWGQNKYGQLGLGIDCNKQAS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           P+ I++    GI  ++V+AG  H   L  SG +
Sbjct: 181 PQLIKSL--TGIPFMQVAAGGAHSFVLTLSGAI 211


>gi|444919546|ref|ZP_21239558.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444708349|gb|ELW49424.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 494

 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 77/232 (33%), Positives = 113/232 (48%), Gaps = 14/232 (6%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + +  G  H+L + S+ +V++ GS+  G LG   ETT   S T +     + V+ V+A  
Sbjct: 51  VAVDAGSSHSLAVRSDGTVWAWGSNASGQLGD--ETTISRS-TPVQVLGLSGVLFVAAGS 107

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           +H   +   G V+  G NSS   G   TN     P   + L GV    V AG N +  + 
Sbjct: 108 SHVLALRYDGTVWAWGSNSSGQRGDGTTNNRAL-PVQAQGLSGVMA--VAAGDNHSLAVR 164

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G     GSN  GQLG G T +RP P  +  L     VV +AAG ++ LAV  +G V++
Sbjct: 165 SDGSAWAWGSNASGQLGEGTTSNRPEPVQVQGLS---GVVAVAAGSAHSLAVRSDGTVWA 221

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           +G+ ++  LG G   D L P  +Q        VV V+AG  H +A+ + G V
Sbjct: 222 WGANASGQLGDGTTTDRLVPVQVQGLS----GVVAVAAGHHHSLAVRNDGTV 269



 Score = 73.9 bits (180), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 72/237 (30%), Positives = 110/237 (46%), Gaps = 17/237 (7%)

Query: 107 VETSAGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV 165
           V+  +G + +  G  H+L + S+ +V++ G++  G LG G  T + V    +     + V
Sbjct: 194 VQGLSGVVAVAAGSAHSLAVRSDGTVWAWGANASGQLGDGTTTDRLVP---VQVQGLSGV 250

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
           V V+A  +H+  V   G V+  G N S   G + + R +  P  V+ L  V    V AG 
Sbjct: 251 VAVAAGHHHSLAVRNDGTVWGWGRNDSNQLG-KGSMR-LLVPAQVQGLSAVVA--VAAGD 306

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
             +  +   G V   GSN +GQLG G T  R     + P+  +  VV +AA   + LAV 
Sbjct: 307 THSLAVGSDGTVWAVGSNNNGQLGDGTTTYR-----LVPVPVLSGVVSVAANDYHSLAVR 361

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            +G V+++G  S   LG G     L P  +         VV V AG  H +A+ S G
Sbjct: 362 SDGTVWAWGYNSTGQLGDGTTTTRLVPVQVSGLS----EVVSVVAGGYHSLAVRSDG 414



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 75/240 (31%), Positives = 109/240 (45%), Gaps = 27/240 (11%)

Query: 111 AGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-----PETTQCVSFTRINFPSAAH 164
           +G M +  G  H+L + S+ S ++ GS+  G LG G     PE  Q    +         
Sbjct: 148 SGVMAVAAGDNHSLAVRSDGSAWAWGSNASGQLGEGTTSNRPEPVQVQGLS--------G 199

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           VV V+A   H+  V   G V+  G N+S   G   T   +  P  V+ L GV    V AG
Sbjct: 200 VVAVAAGSAHSLAVRSDGTVWAWGANASGQLGDGTTTDRLV-PVQVQGLSGVVA--VAAG 256

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
            + +  +   G V   G N   QLG G ++    P  +  L    +VV +AAG ++ LAV
Sbjct: 257 HHHSLAVRNDGTVWGWGRNDSNQLGKG-SMRLLVPAQVQGLS---AVVAVAAGDTHSLAV 312

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             +G V++ GS +N  LG G     L P  + +       VV V+A D H +A+ S G V
Sbjct: 313 GSDGTVWAVGSNNNGQLGDGTTTYRLVPVPVLS------GVVSVAANDYHSLAVRSDGTV 366



 Score = 67.8 bits (164), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 64/196 (32%), Positives = 96/196 (48%), Gaps = 20/196 (10%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + +  G  H+L + S+ +V++ GS+  G LG G  T     +  +  P  + VV V+A++
Sbjct: 300 VAVAAGDTHSLAVGSDGTVWAVGSNNNGQLGDGTTT-----YRLVPVPVLSGVVSVAAND 354

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF-- 230
            H+  V   G V+  G NS+   G   T   +  P  V  L  V    V AG    G+  
Sbjct: 355 YHSLAVRSDGTVWAWGYNSTGQLGDGTTTTRLV-PVQVSGLSEV--VSVVAG----GYHS 407

Query: 231 LTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
           L +R  G     GSN +GQLG G T   P P  +  L  VG+V   A+G S+ LA+  +G
Sbjct: 408 LAVRSDGSAWDWGSNAYGQLGDGSTTYLPVPVRVQQLSGVGAV---ASGSSHSLALRSDG 464

Query: 289 VVYSFGSGSNFCLGHG 304
            V+++G  S   LG+G
Sbjct: 465 TVWTWGYNSFGQLGNG 480



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 39/110 (35%), Positives = 57/110 (51%), Gaps = 5/110 (4%)

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G V   G+N+ GQLG G T   P P  +  ++ +  VV + AG S+ LAV  +G V+++G
Sbjct: 15  GTVWAWGANSSGQLGDGTTTYSPVPVPV-QVQGLSEVVAVDAGSSHSLAVRSDGTVWAWG 73

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           S ++  LG         P  +Q     G  V+ V+AG  HV+AL   G V
Sbjct: 74  SNASGQLGDETTISRSTP--VQVLGLSG--VLFVAAGSSHVLALRYDGTV 119



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 70/150 (46%), Gaps = 9/150 (6%)

Query: 111 AGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G + +    YH+L + S+ +V++ G +  G LG G  TT+ V    +     + VV V 
Sbjct: 345 SGVVSVAANDYHSLAVRSDGTVWAWGYNSTGQLGDGTTTTRLVP---VQVSGLSEVVSVV 401

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR-PIFRPRLVEALKGVPCKQVTAGLNFT 228
           A   H+  V   G  +  G N+    G   T   P+  P  V+ L GV    V +G + +
Sbjct: 402 AGGYHSLAVRSDGSAWDWGSNAYGQLGDGSTTYLPV--PVRVQQLSGVGA--VASGSSHS 457

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPT 258
             L   G V T G N+ GQLG+G  L+  T
Sbjct: 458 LALRSDGTVWTWGYNSFGQLGNGPPLNTAT 487


>gi|397515765|ref|XP_003828114.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase HERC2
            [Pan paniscus]
          Length = 4839

 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/228 (32%), Positives = 107/228 (46%), Gaps = 7/228 (3%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3061 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3119

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3120 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3178

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3179 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3237

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG V
Sbjct: 3238 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQV 3283



 Score = 88.2 bits (217), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 110/237 (46%), Gaps = 17/237 (7%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 169
           + G ++  L +   V+S G    G LGHG       P+     S  +    +  HVV ++
Sbjct: 448 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AGKHVVHIA 503

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G     
Sbjct: 504 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQ 562

Query: 230 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
            L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +
Sbjct: 563 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSIALTKD 621

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V
Sbjct: 622 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEV 676



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 118/251 (47%), Gaps = 12/251 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4035 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4088

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4089 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4147

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4148 HRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4206

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4207 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4264

Query: 334  HVVALDSSGYV 344
            H V     G V
Sbjct: 4265 HCVCCTEDGEV 4275



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/221 (31%), Positives = 110/221 (49%), Gaps = 12/221 (5%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFT 186
             V++CG +  G LG G  ++  V   R     +++VV+   V +   HA  +   G+VF+
Sbjct: 3017 KVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3075

Query: 187  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
             G+      GH  +     +PRL+EALK    + +  G + +  LT  G ++T G   +G
Sbjct: 3076 WGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 3134

Query: 247  QLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGH 303
            +LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG 
Sbjct: 3135 RLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGR 3192

Query: 304  GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            G       P+ I+  R  G  V ++  G +  +AL  SG V
Sbjct: 3193 GGSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVV 3231



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/187 (31%), Positives = 94/187 (50%), Gaps = 20/187 (10%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 399 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 447

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 448 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 507

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 508 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 565

Query: 338 LDSSGYV 344
           +  +G V
Sbjct: 566 VTENGQV 572



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 91/190 (47%), Gaps = 11/190 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2995 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3052

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L +   +  IA 
Sbjct: 3053 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL-KTKRIRDIAC 3111

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3112 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3169

Query: 335  VVALDSSGYV 344
             +AL   G V
Sbjct: 3170 TLALTDEGLV 3179



 Score = 68.2 bits (165), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3109 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3167

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3168 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3226

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3227 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3285

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3286 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3328



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 77/162 (47%), Gaps = 5/162 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2965 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3023

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3024 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3083

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG
Sbjct: 3084 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSG 3123



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 82/177 (46%), Gaps = 5/177 (2%)

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA--FV 178
           Y   + +   +++ G    G LGHG    + +            V+ V+     A    V
Sbjct: 508 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAV 566

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
            ++GQV++ GD      G R  +     P+L+E L+ +   +V  G  F+  LT  G V+
Sbjct: 567 TENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 625

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
           + G   + +LGHG       PK +  L+    V+ +AAG ++ LA+T +  V+S+GS
Sbjct: 626 SWGKGDNQRLGHGTEEHVRYPKLLEGLQG-KKVIDVAAGSTHCLALTEDSEVHSWGS 681



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4157 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4215

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4216 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4274

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4275 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4320



 Score = 55.1 bits (131), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 558 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 616

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 617 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 675

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 676 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 721



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122  HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 3169 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 3227

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SG V+T G    F  GH  ++  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 3228 SGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3286

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 3287 GDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 3330



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 67/137 (48%), Gaps = 3/137 (2%)

Query: 207  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            P   EAL  +   Q+  G      +T  G ++  G    G+LG G T    TP  +  ++
Sbjct: 3981 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQ 4040

Query: 267  EVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
             V    V + +G  + LA++  G VYS+G   +  LGHG +    +PR I++ R  GI V
Sbjct: 4041 HVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLR--GIEV 4098

Query: 326  VRVSAGDEHVVALDSSG 342
            V V+AG  H   + ++G
Sbjct: 4099 VDVAAGGAHSACVTAAG 4115



 Score = 41.2 bits (95), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 7/113 (6%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3957 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4012

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G V
Sbjct: 4013 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4065


>gi|345492280|ref|XP_001603331.2| PREDICTED: regulator of chromosome condensation-like [Nasonia
           vitripennis]
          Length = 423

 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 68/239 (28%), Positives = 116/239 (48%), Gaps = 15/239 (6%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPE----------TTQCVSFTRINFPSA 162
           ++I +G  H +L+ ++  +++CG    G LG  PE            Q +S  ++ F   
Sbjct: 174 IKIASGADHLVLLDSAKHIYTCGCGEQGQLGRLPERKTDRHSRQGVNQLLSPGQVYFKLG 233

Query: 163 AHV-VQVSASENHAAFVL--QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 219
            HV V+   +  +A FV    SG ++  G N+    G +  ++  F P++ + L      
Sbjct: 234 KHVEVENIWAGTYATFVKASHSGDIYVFGLNNYSQIGLKGVDKQ-FHPKVSKTLSNKNWT 292

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
           Q+++G + T  L   G V   G   +G+LG G      T  +  P  E    V +AAG +
Sbjct: 293 QISSGQHHTIALDDEGKVFVIGRKEYGRLGLGPVESDATELTSVPTLEQMKCVDVAAGSA 352

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
              AVT +G +Y++G G++  LG GE+ D   P  I++ + K + V+RVS G +H + L
Sbjct: 353 QSFAVTESGKLYAWGMGTSGQLGTGEEEDVEVPAIIESKQLKDVKVLRVSGGGQHTIVL 411



 Score = 54.3 bits (129), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 70/271 (25%), Positives = 115/271 (42%), Gaps = 40/271 (14%)

Query: 95  RFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSF 154
           RF    +H+ +IV  +AG M      ++  L     V + G +  G LG   +T++  S 
Sbjct: 59  RFAVIPDHT-NIVAIAAGGM------HNVCLTKEGKVMTFGCNDEGALGR--DTSKEGSE 109

Query: 155 TRINFPS-AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-------RDTNRPIFR 206
           T   F    A V+QV+A ++H+A +L  G+VF  G   SF   H       +D  R    
Sbjct: 110 TVPGFVELPAPVIQVTAGDSHSAALLDDGRVFIWG---SFRDSHGTMGLLTKDNERFPVE 166

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH--GDTLDRPTPKSIAP 264
            +L +        ++ +G +    L    H++TCG    GQLG       DR + + +  
Sbjct: 167 IQLQKKF-----IKIASGADHLVLLDSAKHIYTCGCGEQGQLGRLPERKTDRHSRQGVNQ 221

Query: 265 LEEVGSVV----------QIAAGP-SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPR 313
           L   G V            I AG  +  +  + +G +Y FG  +   +G      +  P+
Sbjct: 222 LLSPGQVYFKLGKHVEVENIWAGTYATFVKASHSGDIYVFGLNNYSQIGLKGVDKQFHPK 281

Query: 314 AIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             +T   K  +  ++S+G  H +ALD  G V
Sbjct: 282 VSKTLSNK--NWTQISSGQHHTIALDDEGKV 310



 Score = 47.0 bits (110), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 61/119 (51%), Gaps = 7/119 (5%)

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           LT  G V T G N  G LG  DT    +      +E    V+Q+ AG S+  A+  +G V
Sbjct: 82  LTKEGKVMTFGCNDEGALGR-DTSKEGSETVPGFVELPAPVIQVTAGDSHSAALLDDGRV 140

Query: 291 YSFGS--GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSLC 347
           + +GS   S+  +G   + +E  P  IQ  ++     +++++G +H+V LDS+ ++  C
Sbjct: 141 FIWGSFRDSHGTMGLLTKDNERFPVEIQLQKK----FIKIASGADHLVLLDSAKHIYTC 195



 Score = 42.4 bits (98), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 4/114 (3%)

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           +T  G V  CG    GQLG G+ +   T  ++ P  +  ++V IAAG  + + +T  G V
Sbjct: 31  ITTGGIVLACGQGDVGQLGLGEDVLEKTRFAVIP--DHTNIVAIAAGGMHNVCLTKEGKV 88

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            +FG      LG     +      +  F      V++V+AGD H  AL   G V
Sbjct: 89  MTFGCNDEGALGRDTSKE--GSETVPGFVELPAPVIQVTAGDSHSAALLDDGRV 140


>gi|297296008|ref|XP_001109429.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Macaca
            mulatta]
          Length = 4840

 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/228 (32%), Positives = 107/228 (46%), Gaps = 7/228 (3%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3056 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3114

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3115 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3173

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3174 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3232

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG V
Sbjct: 3233 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQV 3278



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 110/237 (46%), Gaps = 17/237 (7%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 169
           + G ++  L +   V+S G    G LGHG       P+     S  +    +  HVV ++
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AGKHVVHIA 557

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G     
Sbjct: 558 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQ 616

Query: 230 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
            L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +
Sbjct: 617 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSIALTKD 675

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V
Sbjct: 676 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEV 730



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 118/251 (47%), Gaps = 12/251 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4061 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4114

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4115 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4173

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4174 HRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4232

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4233 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4290

Query: 334  HVVALDSSGYV 344
            H V     G V
Sbjct: 4291 HCVCCTEDGEV 4301



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/221 (31%), Positives = 110/221 (49%), Gaps = 12/221 (5%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFT 186
             V++CG +  G LG G  ++  V   R     +++VV+   V +   HA  +   G+VF+
Sbjct: 3012 KVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3070

Query: 187  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
             G+      GH  +     +PRL+EALK    + +  G + +  LT  G ++T G   +G
Sbjct: 3071 WGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 3129

Query: 247  QLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGH 303
            +LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG 
Sbjct: 3130 RLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGR 3187

Query: 304  GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            G       P+ I+  R  G  V ++  G +  +AL  SG V
Sbjct: 3188 GGSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVV 3226



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/187 (31%), Positives = 94/187 (50%), Gaps = 20/187 (10%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 501

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 561

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 562 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 619

Query: 338 LDSSGYV 344
           +  +G V
Sbjct: 620 VTENGQV 626



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 91/190 (47%), Gaps = 11/190 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2990 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3047

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L +   +  IA 
Sbjct: 3048 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL-KTKRIRDIAC 3106

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3107 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3164

Query: 335  VVALDSSGYV 344
             +AL   G V
Sbjct: 3165 TLALTDEGLV 3174



 Score = 68.2 bits (165), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3104 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3162

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3163 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3221

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3222 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3280

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3281 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3323



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 77/162 (47%), Gaps = 5/162 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2960 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3018

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3019 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3078

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG
Sbjct: 3079 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSG 3118



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 82/177 (46%), Gaps = 5/177 (2%)

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA--FV 178
           Y   + +   +++ G    G LGHG    + +            V+ V+     A    V
Sbjct: 562 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAV 620

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
            ++GQV++ GD      G R  +     P+L+E L+ +   +V  G  F+  LT  G V+
Sbjct: 621 TENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 679

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
           + G   + +LGHG       PK +  L+    V+ +AAG ++ LA+T +  V+S+GS
Sbjct: 680 SWGKGDNQRLGHGTEEHVRYPKLLEGLQG-KKVIDVAAGSTHCLALTEDSEVHSWGS 735



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4183 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4241

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4242 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4300

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4301 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4346



 Score = 55.1 bits (131), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 730 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 775



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122  HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 3164 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 3222

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SG V+T G    F  GH  ++  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 3223 SGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3281

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 3282 GDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 3325



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 67/137 (48%), Gaps = 3/137 (2%)

Query: 207  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            P   EAL  +   Q+  G      +T  G ++  G    G+LG G T    TP  +  ++
Sbjct: 4007 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQ 4066

Query: 267  EVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
             V    V + +G  + LA++  G VYS+G   +  LGHG +    +PR I++ R  GI V
Sbjct: 4067 HVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLR--GIEV 4124

Query: 326  VRVSAGDEHVVALDSSG 342
            V V+AG  H   + ++G
Sbjct: 4125 VDVAAGGAHSACVTAAG 4141



 Score = 41.2 bits (95), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 7/113 (6%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3983 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4038

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G V
Sbjct: 4039 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4091


>gi|126032348|ref|NP_004658.3| E3 ubiquitin-protein ligase HERC2 [Homo sapiens]
 gi|308153453|sp|O95714.2|HERC2_HUMAN RecName: Full=E3 ubiquitin-protein ligase HERC2; AltName: Full=HECT
            domain and RCC1-like domain-containing protein 2
          Length = 4834

 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/228 (32%), Positives = 107/228 (46%), Gaps = 7/228 (3%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3056 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3114

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3115 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3173

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3174 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3232

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG V
Sbjct: 3233 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQV 3278



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 110/237 (46%), Gaps = 17/237 (7%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 169
           + G ++  L +   V+S G    G LGHG       P+     S  +    +  HVV ++
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AGKHVVHIA 557

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G     
Sbjct: 558 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQ 616

Query: 230 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
            L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +
Sbjct: 617 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSIALTKD 675

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V
Sbjct: 676 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEV 730



 Score = 87.8 bits (216), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 118/251 (47%), Gaps = 12/251 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4030 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4083

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4084 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4142

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4143 HRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4201

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4202 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4259

Query: 334  HVVALDSSGYV 344
            H V     G V
Sbjct: 4260 HCVCCTEDGEV 4270



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/221 (31%), Positives = 110/221 (49%), Gaps = 12/221 (5%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFT 186
             V++CG +  G LG G  ++  V   R     +++VV+   V +   HA  +   G+VF+
Sbjct: 3012 KVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3070

Query: 187  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
             G+      GH  +     +PRL+EALK    + +  G + +  LT  G ++T G   +G
Sbjct: 3071 WGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 3129

Query: 247  QLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGH 303
            +LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG 
Sbjct: 3130 RLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGR 3187

Query: 304  GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            G       P+ I+  R  G  V ++  G +  +AL  SG V
Sbjct: 3188 GGSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVV 3226



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/187 (31%), Positives = 94/187 (50%), Gaps = 20/187 (10%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 501

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 561

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 562 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 619

Query: 338 LDSSGYV 344
           +  +G V
Sbjct: 620 VTENGQV 626



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 91/190 (47%), Gaps = 11/190 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2990 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3047

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L +   +  IA 
Sbjct: 3048 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL-KTKRIRDIAC 3106

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3107 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3164

Query: 335  VVALDSSGYV 344
             +AL   G V
Sbjct: 3165 TLALTDEGLV 3174



 Score = 68.2 bits (165), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3104 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3162

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3163 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3221

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3222 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3280

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3281 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3323



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 77/162 (47%), Gaps = 5/162 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2960 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3018

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3019 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3078

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG
Sbjct: 3079 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSG 3118



 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 82/177 (46%), Gaps = 5/177 (2%)

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA--FV 178
           Y   + +   +++ G    G LGHG    + +            V+ V+     A    V
Sbjct: 562 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAV 620

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
            ++GQV++ GD      G R  +     P+L+E L+ +   +V  G  F+  LT  G V+
Sbjct: 621 TENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 679

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
           + G   + +LGHG       PK +  L+    V+ +AAG ++ LA+T +  V+S+GS
Sbjct: 680 SWGKGDNQRLGHGTEEHVRYPKLLEGLQG-KKVIDVAAGSTHCLALTEDSEVHSWGS 735



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4152 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4210

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4211 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4269

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4270 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4315



 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 730 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 775



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122  HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 3164 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 3222

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SG V+T G    F  GH  ++  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 3223 SGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3281

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 3282 GDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 3325



 Score = 47.8 bits (112), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 67/137 (48%), Gaps = 3/137 (2%)

Query: 207  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            P   EAL  +   Q+  G      +T  G ++  G    G+LG G T    TP  +  ++
Sbjct: 3976 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQ 4035

Query: 267  EVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
             V    V + +G  + LA++  G VYS+G   +  LGHG +    +PR I++ R  GI V
Sbjct: 4036 HVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLR--GIEV 4093

Query: 326  VRVSAGDEHVVALDSSG 342
            V V+AG  H   + ++G
Sbjct: 4094 VDVAAGGAHSACVTAAG 4110



 Score = 41.2 bits (95), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 7/113 (6%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4007

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G V
Sbjct: 4008 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4060


>gi|405954130|gb|EKC21653.1| Putative E3 ubiquitin-protein ligase HERC1 [Crassostrea gigas]
          Length = 2154

 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 119/237 (50%), Gaps = 14/237 (5%)

Query: 115  QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS-- 171
            QI  G+  T ++ N+ +V +CG    G LG G  +    S T I+      V Q++ S  
Sbjct: 1835 QIVCGQNCTFVVQNNGTVLACGEGSYGRLGQG-NSDDLHSLTAISSIQGFVVTQLATSVG 1893

Query: 172  -ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
             + H   V +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 1894 SDGHTLAVTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVIQLSCGFKHSAV 1952

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G T ++  P  +  LE  ++G V   A G ++ L V+ +G
Sbjct: 1953 VTADGKLFTFGNGDYGRLGLGTTTNKKVPTRVVALESHQIGYV---ACGLNHTLCVSADG 2009

Query: 289  V-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              V++FG G    LG G    +  P  I+    +G  + +V+ G +  VAL   G V
Sbjct: 2010 TNVWAFGDGDFGKLGQGNTVGKHLPTKIKAL--QGHVIKKVACGTQFSVALSKYGKV 2064



 Score = 40.4 bits (93), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 63/141 (44%), Gaps = 6/141 (4%)

Query: 116  ITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
            +  G  HTL +S   ++V++ G    G LG G    + +  T+I       + +V+    
Sbjct: 1995 VACGLNHTLCVSADGTNVWAFGDGDFGKLGQGNTVGKHLP-TKIKALQGHVIKKVACGTQ 2053

Query: 174  HAAFVLQSGQVFTCGDNSSFCCGHRDTNR-PIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             +  + + G+VFT G       G  DT      +P+ V +L G   + V  G   T  LT
Sbjct: 2054 FSVALSKYGKVFTWGQER--LIGQPDTRGGSNCQPQEVASLSGYFIEDVVCGAEHTLVLT 2111

Query: 233  IRGHVHTCGSNTHGQLGHGDT 253
              G V   GSN+ GQLG G T
Sbjct: 2112 SDGDVWGWGSNSEGQLGLGHT 2132


>gi|410265952|gb|JAA20942.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/228 (32%), Positives = 107/228 (46%), Gaps = 7/228 (3%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3056 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3114

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3115 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3173

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3174 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3232

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG V
Sbjct: 3233 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQV 3278



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 110/237 (46%), Gaps = 17/237 (7%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 169
           + G ++  L +   V+S G    G LGHG       P+     S  +    +  HVV ++
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AGKHVVHIA 557

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G     
Sbjct: 558 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQ 616

Query: 230 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
            L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +
Sbjct: 617 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSIALTKD 675

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V
Sbjct: 676 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEV 730



 Score = 87.8 bits (216), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 118/251 (47%), Gaps = 12/251 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4030 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4083

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4084 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4142

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4143 HRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4201

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4202 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4259

Query: 334  HVVALDSSGYV 344
            H V     G V
Sbjct: 4260 HCVCCTEDGEV 4270



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/221 (31%), Positives = 110/221 (49%), Gaps = 12/221 (5%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFT 186
             V++CG +  G LG G  ++  V   R     +++VV+   V +   HA  +   G+VF+
Sbjct: 3012 KVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3070

Query: 187  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
             G+      GH  +     +PRL+EALK    + +  G + +  LT  G ++T G   +G
Sbjct: 3071 WGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 3129

Query: 247  QLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGH 303
            +LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG 
Sbjct: 3130 RLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGR 3187

Query: 304  GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            G       P+ I+  R  G  V ++  G +  +AL  SG V
Sbjct: 3188 GGSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVV 3226



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/187 (31%), Positives = 94/187 (50%), Gaps = 20/187 (10%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 501

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 561

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 562 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 619

Query: 338 LDSSGYV 344
           +  +G V
Sbjct: 620 VTENGQV 626



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 91/190 (47%), Gaps = 11/190 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2990 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3047

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L +   +  IA 
Sbjct: 3048 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL-KTKRIRDIAC 3106

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3107 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3164

Query: 335  VVALDSSGYV 344
             +AL   G V
Sbjct: 3165 TLALTDEGLV 3174



 Score = 68.2 bits (165), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3104 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3162

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3163 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3221

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3222 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3280

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3281 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3323



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 77/162 (47%), Gaps = 5/162 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2960 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3018

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3019 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3078

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG
Sbjct: 3079 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSG 3118



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 82/177 (46%), Gaps = 5/177 (2%)

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA--FV 178
           Y   + +   +++ G    G LGHG    + +            V+ V+     A    V
Sbjct: 562 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAV 620

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
            ++GQV++ GD      G R  +     P+L+E L+ +   +V  G  F+  LT  G V+
Sbjct: 621 TENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 679

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
           + G   + +LGHG       PK +  L+    V+ +AAG ++ LA+T +  V+S+GS
Sbjct: 680 SWGKGDNQRLGHGTEEHVRYPKLLEGLQG-KKVIDVAAGSTHCLALTEDSEVHSWGS 735



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4152 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4210

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4211 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4269

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4270 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4315



 Score = 55.1 bits (131), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 730 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 775



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122  HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 3164 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 3222

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SG V+T G    F  GH  ++  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 3223 SGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3281

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 3282 GDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 3325



 Score = 47.8 bits (112), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 67/137 (48%), Gaps = 3/137 (2%)

Query: 207  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            P   EAL  +   Q+  G      +T  G ++  G    G+LG G T    TP  +  ++
Sbjct: 3976 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQ 4035

Query: 267  EVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
             V    V + +G  + LA++  G VYS+G   +  LGHG +    +PR I++ R  GI V
Sbjct: 4036 HVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLR--GIEV 4093

Query: 326  VRVSAGDEHVVALDSSG 342
            V V+AG  H   + ++G
Sbjct: 4094 VDVAAGGAHSACVTAAG 4110



 Score = 41.2 bits (95), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 7/113 (6%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4007

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G V
Sbjct: 4008 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4060


>gi|410223232|gb|JAA08835.1| hect domain and RLD 2 [Pan troglodytes]
 gi|410304314|gb|JAA30757.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/228 (32%), Positives = 107/228 (46%), Gaps = 7/228 (3%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3056 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3114

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3115 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3173

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3174 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3232

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG V
Sbjct: 3233 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQV 3278



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 110/237 (46%), Gaps = 17/237 (7%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 169
           + G ++  L +   V+S G    G LGHG       P+     S  +    +  HVV ++
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AGKHVVHIA 557

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G     
Sbjct: 558 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQ 616

Query: 230 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
            L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +
Sbjct: 617 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSIALTKD 675

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V
Sbjct: 676 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEV 730



 Score = 87.8 bits (216), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 118/251 (47%), Gaps = 12/251 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4030 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4083

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4084 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4142

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4143 HRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4201

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4202 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4259

Query: 334  HVVALDSSGYV 344
            H V     G V
Sbjct: 4260 HCVCCTEDGEV 4270



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/221 (31%), Positives = 110/221 (49%), Gaps = 12/221 (5%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFT 186
             V++CG +  G LG G  ++  V   R     +++VV+   V +   HA  +   G+VF+
Sbjct: 3012 KVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3070

Query: 187  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
             G+      GH  +     +PRL+EALK    + +  G + +  LT  G ++T G   +G
Sbjct: 3071 WGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 3129

Query: 247  QLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGH 303
            +LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG 
Sbjct: 3130 RLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGR 3187

Query: 304  GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            G       P+ I+  R  G  V ++  G +  +AL  SG V
Sbjct: 3188 GGSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVV 3226



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/187 (31%), Positives = 94/187 (50%), Gaps = 20/187 (10%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 501

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 561

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 562 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 619

Query: 338 LDSSGYV 344
           +  +G V
Sbjct: 620 VTENGQV 626



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 91/190 (47%), Gaps = 11/190 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2990 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3047

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L +   +  IA 
Sbjct: 3048 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL-KTKRIRDIAC 3106

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3107 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3164

Query: 335  VVALDSSGYV 344
             +AL   G V
Sbjct: 3165 TLALTDEGLV 3174



 Score = 68.2 bits (165), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3104 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3162

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3163 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3221

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3222 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3280

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3281 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3323



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 77/162 (47%), Gaps = 5/162 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2960 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3018

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3019 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3078

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG
Sbjct: 3079 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSG 3118



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 82/177 (46%), Gaps = 5/177 (2%)

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA--FV 178
           Y   + +   +++ G    G LGHG    + +            V+ V+     A    V
Sbjct: 562 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAV 620

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
            ++GQV++ GD      G R  +     P+L+E L+ +   +V  G  F+  LT  G V+
Sbjct: 621 TENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 679

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
           + G   + +LGHG       PK +  L+    V+ +AAG ++ LA+T +  V+S+GS
Sbjct: 680 SWGKGDNQRLGHGTEEHVRYPKLLEGLQG-KKVIDVAAGSTHCLALTEDSEVHSWGS 735



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4152 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4210

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4211 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4269

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4270 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4315



 Score = 55.1 bits (131), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 730 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 775



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122  HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 3164 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 3222

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SG V+T G    F  GH  ++  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 3223 SGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3281

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 3282 GDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 3325



 Score = 47.8 bits (112), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 67/137 (48%), Gaps = 3/137 (2%)

Query: 207  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            P   EAL  +   Q+  G      +T  G ++  G    G+LG G T    TP  +  ++
Sbjct: 3976 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQ 4035

Query: 267  EVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
             V    V + +G  + LA++  G VYS+G   +  LGHG +    +PR I++ R  GI V
Sbjct: 4036 HVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLR--GIEV 4093

Query: 326  VRVSAGDEHVVALDSSG 342
            V V+AG  H   + ++G
Sbjct: 4094 VDVAAGGAHSACVTAAG 4110



 Score = 41.2 bits (95), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 7/113 (6%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4007

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G V
Sbjct: 4008 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4060


>gi|380817670|gb|AFE80709.1| E3 ubiquitin-protein ligase HERC2 [Macaca mulatta]
          Length = 4829

 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 73/228 (32%), Positives = 107/228 (46%), Gaps = 7/228 (3%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3051 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3109

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3110 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3168

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3169 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3227

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG V
Sbjct: 3228 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQV 3273



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 110/237 (46%), Gaps = 17/237 (7%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 169
           + G ++  L +   V+S G    G LGHG       P+     S  +    +  HVV ++
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AGKHVVHIA 557

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G     
Sbjct: 558 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQ 616

Query: 230 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
            L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +
Sbjct: 617 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSIALTKD 675

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V
Sbjct: 676 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEV 730



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 118/251 (47%), Gaps = 12/251 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4025 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4078

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4079 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4137

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4138 HRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4196

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4197 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4254

Query: 334  HVVALDSSGYV 344
            H V     G V
Sbjct: 4255 HCVCCTEDGEV 4265



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/221 (31%), Positives = 110/221 (49%), Gaps = 12/221 (5%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFT 186
             V++CG +  G LG G  ++  V   R     +++VV+   V +   HA  +   G+VF+
Sbjct: 3007 KVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3065

Query: 187  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
             G+      GH  +     +PRL+EALK    + +  G + +  LT  G ++T G   +G
Sbjct: 3066 WGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 3124

Query: 247  QLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGH 303
            +LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG 
Sbjct: 3125 RLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGR 3182

Query: 304  GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            G       P+ I+  R  G  V ++  G +  +AL  SG V
Sbjct: 3183 GGSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVV 3221



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/187 (31%), Positives = 94/187 (50%), Gaps = 20/187 (10%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 501

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 561

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 562 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 619

Query: 338 LDSSGYV 344
           +  +G V
Sbjct: 620 VTENGQV 626



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 91/190 (47%), Gaps = 11/190 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2985 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3042

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L +   +  IA 
Sbjct: 3043 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL-KTKRIRDIAC 3101

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3102 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3159

Query: 335  VVALDSSGYV 344
             +AL   G V
Sbjct: 3160 TLALTDEGLV 3169



 Score = 67.8 bits (164), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3099 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3157

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3158 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3216

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3217 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3275

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3276 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3318



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 77/162 (47%), Gaps = 5/162 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2955 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3013

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3014 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3073

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG
Sbjct: 3074 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSG 3113



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 82/177 (46%), Gaps = 5/177 (2%)

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA--FV 178
           Y   + +   +++ G    G LGHG    + +            V+ V+     A    V
Sbjct: 562 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAV 620

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
            ++GQV++ GD      G R  +     P+L+E L+ +   +V  G  F+  LT  G V+
Sbjct: 621 TENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 679

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
           + G   + +LGHG       PK +  L+    V+ +AAG ++ LA+T +  V+S+GS
Sbjct: 680 SWGKGDNQRLGHGTEEHVRYPKLLEGLQG-KKVIDVAAGSTHCLALTEDSEVHSWGS 735



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4147 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4205

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4206 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4264

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4265 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4310



 Score = 55.1 bits (131), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 730 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 775



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122  HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 3159 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 3217

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SG V+T G    F  GH  ++  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 3218 SGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3276

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 3277 GDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 3320



 Score = 47.8 bits (112), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 67/137 (48%), Gaps = 3/137 (2%)

Query: 207  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            P   EAL  +   Q+  G      +T  G ++  G    G+LG G T    TP  +  ++
Sbjct: 3971 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQ 4030

Query: 267  EVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
             V    V + +G  + LA++  G VYS+G   +  LGHG +    +PR I++ R  GI V
Sbjct: 4031 HVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLR--GIEV 4088

Query: 326  VRVSAGDEHVVALDSSG 342
            V V+AG  H   + ++G
Sbjct: 4089 VDVAAGGAHSACVTAAG 4105



 Score = 41.2 bits (95), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 7/113 (6%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3947 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4002

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G V
Sbjct: 4003 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4055


>gi|148689922|gb|EDL21869.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 2, isoform CRA_b [Mus
            musculus]
          Length = 4841

 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 73/228 (32%), Positives = 107/228 (46%), Gaps = 7/228 (3%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3062 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3120

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3121 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3179

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3180 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3238

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG V
Sbjct: 3239 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQV 3284



 Score = 87.8 bits (216), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 118/251 (47%), Gaps = 12/251 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4037 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4090

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4091 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4149

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4150 HRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4208

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4209 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4266

Query: 334  HVVALDSSGYV 344
            H V     G V
Sbjct: 4267 HCVCCTEDGEV 4277



 Score = 87.4 bits (215), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 67/237 (28%), Positives = 110/237 (46%), Gaps = 17/237 (7%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 169
           + G ++  L +   V+S G    G LGHG       P+     S  +    +  HVV ++
Sbjct: 508 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AGKHVVHIA 563

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G     
Sbjct: 564 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQ 622

Query: 230 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
            L +   G V + G   +G+LG G +    TPK I  L+++  V+++  G  + +A+T +
Sbjct: 623 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVIKVRCGSQFSIALTKD 681

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V
Sbjct: 682 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEV 736



 Score = 80.9 bits (198), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 70/221 (31%), Positives = 110/221 (49%), Gaps = 12/221 (5%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFT 186
             V+SCG +  G LG G  ++  V   R     +++VV+   V +   HA  +   G+VF+
Sbjct: 3018 KVYSCGEATNGRLGLG-MSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3076

Query: 187  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
             G+      GH  +     +PRL+EALK    + +  G + +  LT  G ++T G   +G
Sbjct: 3077 WGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 3135

Query: 247  QLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGH 303
            +LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG 
Sbjct: 3136 RLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGR 3193

Query: 304  GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            G       P+ I+  R  G  V ++  G +  +AL  SG V
Sbjct: 3194 GGSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVV 3232



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 57/187 (30%), Positives = 94/187 (50%), Gaps = 20/187 (10%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V+QV+ +E     + ++G+V+T   NS            +  P+LV+ L      ++ A 
Sbjct: 459 VMQVACAEKRFLILSRNGRVYTQAYNSD-----------MLAPQLVQGLASRNIVKIAAH 507

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 508 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 567

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 568 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 625

Query: 338 LDSSGYV 344
           +  +G V
Sbjct: 626 VTENGQV 632



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 92/190 (48%), Gaps = 11/190 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V++CG+  N     G      PI  PR + AL     
Sbjct: 2996 SALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPI--PRQITALSSYVV 3053

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L +   +  IA 
Sbjct: 3054 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL-KTKRIRDIAC 3112

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3113 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3170

Query: 335  VVALDSSGYV 344
             +AL   G V
Sbjct: 3171 TLALTDEGLV 3180



 Score = 67.8 bits (164), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3110 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3168

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3169 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3227

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3228 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3286

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3287 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3329



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 78/162 (48%), Gaps = 5/162 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V++CG 
Sbjct: 2966 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGE 3024

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3025 ATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3084

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG
Sbjct: 3085 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSG 3124



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 82/177 (46%), Gaps = 5/177 (2%)

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA--FV 178
           Y   + +   +++ G    G LGHG    + +            V+ V+     A    V
Sbjct: 568 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAV 626

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
            ++GQV++ GD      G R  +     P+L+E L+ +   +V  G  F+  LT  G V+
Sbjct: 627 TENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVY 685

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
           + G   + +LGHG       PK +  L+    V+ +AAG ++ LA+T +  V+S+GS
Sbjct: 686 SWGKGDNQRLGHGTEEHVRYPKLLEGLQG-KKVIDVAAGSTHCLALTEDSEVHSWGS 741



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4159 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4217

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4218 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4276

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4277 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4322



 Score = 54.3 bits (129), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       V++V      + 
Sbjct: 618 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVIKVRCGSQFSI 676

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 677 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 735

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L+    +V IA GP+   A
Sbjct: 736 VHSWGSNDQCQ--HFDTLRVTKPEPTALPGLDS-KHIVGIACGPAQSFA 781



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122  HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 3170 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 3228

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SG V+T G    F  GH  ++  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 3229 SGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3287

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 3288 GDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 3331



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 67/137 (48%), Gaps = 3/137 (2%)

Query: 207  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            P   EAL  +   Q+  G      +T  G ++  G    G+LG G T    TP  +  ++
Sbjct: 3983 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQ 4042

Query: 267  EVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
             V    V + +G  + LA++  G VYS+G   +  LGHG +    +PR I++ R  GI V
Sbjct: 4043 HVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLR--GIEV 4100

Query: 326  VRVSAGDEHVVALDSSG 342
            V V+AG  H   + ++G
Sbjct: 4101 VDVAAGGAHSACVTAAG 4117



 Score = 41.2 bits (95), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 7/113 (6%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3959 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4014

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G V
Sbjct: 4015 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4067


>gi|134288898|ref|NP_034548.2| E3 ubiquitin-protein ligase HERC2 [Mus musculus]
 gi|341941077|sp|Q4U2R1.3|HERC2_MOUSE RecName: Full=E3 ubiquitin-protein ligase HERC2; AltName: Full=HECT
            domain and RCC1-like domain-containing protein 2
          Length = 4836

 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 73/228 (32%), Positives = 107/228 (46%), Gaps = 7/228 (3%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3057 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3115

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3116 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3174

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3175 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3233

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG V
Sbjct: 3234 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQV 3279



 Score = 87.8 bits (216), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 118/251 (47%), Gaps = 12/251 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4032 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4085

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4086 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4144

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4145 HRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4203

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4204 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4261

Query: 334  HVVALDSSGYV 344
            H V     G V
Sbjct: 4262 HCVCCTEDGEV 4272



 Score = 87.4 bits (215), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 67/237 (28%), Positives = 110/237 (46%), Gaps = 17/237 (7%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 169
           + G ++  L +   V+S G    G LGHG       P+     S  +    +  HVV ++
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AGKHVVHIA 558

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G     
Sbjct: 559 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQ 617

Query: 230 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
            L +   G V + G   +G+LG G +    TPK I  L+++  V+++  G  + +A+T +
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVIKVRCGSQFSIALTKD 676

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V
Sbjct: 677 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEV 731



 Score = 81.3 bits (199), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 70/221 (31%), Positives = 110/221 (49%), Gaps = 12/221 (5%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFT 186
             V+SCG +  G LG G  ++  V   R     +++VV+   V +   HA  +   G+VF+
Sbjct: 3013 KVYSCGEATNGRLGLG-MSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3071

Query: 187  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
             G+      GH  +     +PRL+EALK    + +  G + +  LT  G ++T G   +G
Sbjct: 3072 WGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 3130

Query: 247  QLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGH 303
            +LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG 
Sbjct: 3131 RLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGR 3188

Query: 304  GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            G       P+ I+  R  G  V ++  G +  +AL  SG V
Sbjct: 3189 GGSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVV 3227



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 57/187 (30%), Positives = 94/187 (50%), Gaps = 20/187 (10%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V+QV+ +E     + ++G+V+T   NS            +  P+LV+ L      ++ A 
Sbjct: 454 VMQVACAEKRFLILSRNGRVYTQAYNSD-----------MLAPQLVQGLASRNIVKIAAH 502

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 620

Query: 338 LDSSGYV 344
           +  +G V
Sbjct: 621 VTENGQV 627



 Score = 74.7 bits (182), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 92/190 (48%), Gaps = 11/190 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V++CG+  N     G      PI  PR + AL     
Sbjct: 2991 SALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPI--PRQITALSSYVV 3048

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L +   +  IA 
Sbjct: 3049 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL-KTKRIRDIAC 3107

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3108 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3165

Query: 335  VVALDSSGYV 344
             +AL   G V
Sbjct: 3166 TLALTDEGLV 3175



 Score = 68.2 bits (165), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3105 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3163

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3164 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3222

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3223 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3281

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3282 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3324



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 78/162 (48%), Gaps = 5/162 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V++CG 
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGE 3019

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3020 ATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3079

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG
Sbjct: 3080 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSG 3119



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 82/177 (46%), Gaps = 5/177 (2%)

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA--FV 178
           Y   + +   +++ G    G LGHG    + +            V+ V+     A    V
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAV 621

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
            ++GQV++ GD      G R  +     P+L+E L+ +   +V  G  F+  LT  G V+
Sbjct: 622 TENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVY 680

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
           + G   + +LGHG       PK +  L+    V+ +AAG ++ LA+T +  V+S+GS
Sbjct: 681 SWGKGDNQRLGHGTEEHVRYPKLLEGLQG-KKVIDVAAGSTHCLALTEDSEVHSWGS 736



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4154 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4212

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4213 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4271

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4272 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4317



 Score = 54.3 bits (129), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       V++V      + 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVIKVRCGSQFSI 671

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L+    +V IA GP+   A
Sbjct: 731 VHSWGSNDQCQ--HFDTLRVTKPEPTALPGLDS-KHIVGIACGPAQSFA 776



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122  HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 3165 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 3223

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SG V+T G    F  GH  ++  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 3224 SGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3282

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 3283 GDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 3326



 Score = 48.1 bits (113), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 67/137 (48%), Gaps = 3/137 (2%)

Query: 207  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            P   EAL  +   Q+  G      +T  G ++  G    G+LG G T    TP  +  ++
Sbjct: 3978 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQ 4037

Query: 267  EVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
             V    V + +G  + LA++  G VYS+G   +  LGHG +    +PR I++ R  GI V
Sbjct: 4038 HVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLR--GIEV 4095

Query: 326  VRVSAGDEHVVALDSSG 342
            V V+AG  H   + ++G
Sbjct: 4096 VDVAAGGAHSACVTAAG 4112



 Score = 41.2 bits (95), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 7/113 (6%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3954 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4009

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G V
Sbjct: 4010 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4062


>gi|224495959|ref|NP_001139096.1| probable E3 ubiquitin-protein ligase HERC3 [Danio rerio]
          Length = 1046

 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 68/225 (30%), Positives = 108/225 (48%), Gaps = 6/225 (2%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH-VVQVSASEN 173
           ++ G+ H+L ++    VF+ G+   G LG G    + V   R+      H + QV    +
Sbjct: 89  VSCGQAHSLAVNEQGQVFAWGAGDGGQLGLG-TAEEAVRVPRLIKKLCEHRISQVMCGNH 147

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H   + + GQ+F  G+NSS   G          P+ +++L G+P  Q++AG + +  L+ 
Sbjct: 148 HCIALSKDGQLFVWGENSSGQLGLGKGEPSTLSPQPLKSLCGIPLTQISAGGDHSFALSF 207

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V   G N+ GQLG  D  DR  P  I  L     VV I+ G  +  A+T  G +++F
Sbjct: 208 SGAVFGWGKNSAGQLGLNDEQDRAVPCHIKFLRS-QKVVYISCGEEHTAALTKEGGLFTF 266

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           G+GS   LGH    +E  PR +      G  V +++ G  H +A 
Sbjct: 267 GNGSKGQLGHDSTRNEPLPRRVMELM--GTEVSQIACGRNHTLAF 309



 Score = 85.5 bits (210), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 72/239 (30%), Positives = 110/239 (46%), Gaps = 20/239 (8%)

Query: 112 GNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHG-----PETTQCVSFTRINFPSAAHV 165
           G  ++  G  H+L L+ + SV++CGS+ CG LGH      PE    +   +I+       
Sbjct: 35  GLKEVACGNQHSLFLLHDGSVYTCGSNSCGQLGHDKGGSRPELVGALDAQKIS------- 87

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
             VS  + H+  V + GQVF  G       G       +  PRL++ L      QV  G 
Sbjct: 88  -GVSCGQAHSLAVNEQGQVFAWGAGDGGQLGLGTAEEAVRVPRLIKKLCEHRISQVMCGN 146

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV--VQIAAGPSYMLA 283
           +    L+  G +   G N+ GQLG G     P+  S  PL+ +  +   QI+AG  +  A
Sbjct: 147 HHCIALSKDGQLFVWGENSSGQLGLGK--GEPSTLSPQPLKSLCGIPLTQISAGGDHSFA 204

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           ++ +G V+ +G  S   LG  ++ D   P  I+  R +   VV +S G+EH  AL   G
Sbjct: 205 LSFSGAVFGWGKNSAGQLGLNDEQDRAVPCHIKFLRSQ--KVVYISCGEEHTAALTKEG 261



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 59/194 (30%), Positives = 96/194 (49%), Gaps = 8/194 (4%)

Query: 115 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+  G +H + +S +  +F  G +  G LG G      +S   +       + Q+SA  +
Sbjct: 141 QVMCGNHHCIALSKDGQLFVWGENSSGQLGLGKGEPSTLSPQPLKSLCGIPLTQISAGGD 200

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           H+  +  SG VF  G NS+   G  D  +R +  P  ++ L+      ++ G   T  LT
Sbjct: 201 HSFALSFSGAVFGWGKNSAGQLGLNDEQDRAV--PCHIKFLRSQKVVYISCGEEHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGNGVV 290
             G + T G+ + GQLGH  T + P P+ +  +E +G+ V QIA G ++ LA V   G++
Sbjct: 259 KEGGLFTFGNGSKGQLGHDSTRNEPLPRRV--MELMGTEVSQIACGRNHTLAFVPSTGLI 316

Query: 291 YSFGSGSNFCLGHG 304
           Y+FG  +   LG G
Sbjct: 317 YAFGCNTQGQLGTG 330



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/157 (36%), Positives = 75/157 (47%), Gaps = 9/157 (5%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI+ G  H+  +S S +VF  G +  G LG   E  + V    I F  +  VV +S  E 
Sbjct: 194 QISAGGDHSFALSFSGAVFGWGKNSAGQLGLNDEQDRAVP-CHIKFLRSQKVVYISCGEE 252

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFT-GFL 231
           H A + + G +FT G+ S    GH  T N P+  PR V  L G    Q+  G N T  F+
Sbjct: 253 HTAALTKEGGLFTFGNGSKGQLGHDSTRNEPL--PRRVMELMGTEVSQIACGRNHTLAFV 310

Query: 232 TIRGHVHTCGSNTHGQLGHG--DTLDRPTPKS-IAPL 265
              G ++  G NT GQLG G   +   P P S I PL
Sbjct: 311 PSTGLIYAFGCNTQGQLGTGIRGSAKSPVPVSNIQPL 347



 Score = 60.8 bits (146), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 67/140 (47%), Gaps = 6/140 (4%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +F PR      G   K+V  G   + FL   G V+TCGSN+ GQLGH     RP      
Sbjct: 22  VFEPRSCCVFDGRGLKEVACGNQHSLFLLHDGSVYTCGSNSCGQLGHDKGGSRPELVGAL 81

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKG 322
             +++  V   + G ++ LAV   G V+++G+G    LG G   + ++ PR I+      
Sbjct: 82  DAQKISGV---SCGQAHSLAVNEQGQVFAWGAGDGGQLGLGTAEEAVRVPRLIKKLCEHR 138

Query: 323 IHVVRVSAGDEHVVALDSSG 342
           I   +V  G+ H +AL   G
Sbjct: 139 IS--QVMCGNHHCIALSKDG 156


>gi|403273887|ref|XP_003928729.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Saimiri boliviensis boliviensis]
          Length = 979

 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 120/252 (47%), Gaps = 10/252 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYV 344
           H  A + SSG +
Sbjct: 305 HTSAFVPSSGRI 316



 Score = 81.3 bits (199), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIVQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342



 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 107/226 (47%), Gaps = 7/226 (3%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGV 263



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 95/213 (44%), Gaps = 9/213 (4%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           P+ I++    GI  ++V+AG  H   L  SG +
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAI 211


>gi|380787033|gb|AFE65392.1| E3 ubiquitin-protein ligase HERC2 [Macaca mulatta]
          Length = 4834

 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 73/228 (32%), Positives = 107/228 (46%), Gaps = 7/228 (3%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3056 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3114

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3115 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3173

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3174 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3232

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG V
Sbjct: 3233 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQV 3278



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 110/237 (46%), Gaps = 17/237 (7%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 169
           + G ++  L +   V+S G    G LGHG       P+     S  +    +  HVV ++
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AGKHVVHIA 557

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G     
Sbjct: 558 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQ 616

Query: 230 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
            L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +
Sbjct: 617 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSIALTKD 675

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V
Sbjct: 676 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEV 730



 Score = 87.8 bits (216), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 118/251 (47%), Gaps = 12/251 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4030 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4083

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4084 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4142

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4143 HRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4201

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4202 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4259

Query: 334  HVVALDSSGYV 344
            H V     G V
Sbjct: 4260 HCVCCTEDGEV 4270



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/221 (31%), Positives = 110/221 (49%), Gaps = 12/221 (5%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFT 186
             V++CG +  G LG G  ++  V   R     +++VV+   V +   HA  +   G+VF+
Sbjct: 3012 KVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3070

Query: 187  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
             G+      GH  +     +PRL+EALK    + +  G + +  LT  G ++T G   +G
Sbjct: 3071 WGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 3129

Query: 247  QLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGH 303
            +LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG 
Sbjct: 3130 RLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGR 3187

Query: 304  GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            G       P+ I+  R  G  V ++  G +  +AL  SG V
Sbjct: 3188 GGSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVV 3226



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/187 (31%), Positives = 94/187 (50%), Gaps = 20/187 (10%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 501

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 561

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 562 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 619

Query: 338 LDSSGYV 344
           +  +G V
Sbjct: 620 VTENGQV 626



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 91/190 (47%), Gaps = 11/190 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2990 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3047

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L +   +  IA 
Sbjct: 3048 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL-KTKRIRDIAC 3106

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3107 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3164

Query: 335  VVALDSSGYV 344
             +AL   G V
Sbjct: 3165 TLALTDEGLV 3174



 Score = 67.8 bits (164), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3104 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3162

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3163 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3221

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3222 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3280

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3281 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3323



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 77/162 (47%), Gaps = 5/162 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2960 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3018

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3019 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3078

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG
Sbjct: 3079 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSG 3118



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 82/177 (46%), Gaps = 5/177 (2%)

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA--FV 178
           Y   + +   +++ G    G LGHG    + +            V+ V+     A    V
Sbjct: 562 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAV 620

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
            ++GQV++ GD      G R  +     P+L+E L+ +   +V  G  F+  LT  G V+
Sbjct: 621 TENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 679

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
           + G   + +LGHG       PK +  L+    V+ +AAG ++ LA+T +  V+S+GS
Sbjct: 680 SWGKGDNQRLGHGTEEHVRYPKLLEGLQG-KKVIDVAAGSTHCLALTEDSEVHSWGS 735



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4152 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4210

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4211 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4269

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4270 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4315



 Score = 55.1 bits (131), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 730 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 775



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122  HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 3164 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 3222

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SG V+T G    F  GH  ++  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 3223 SGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3281

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 3282 GDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 3325



 Score = 47.8 bits (112), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 67/137 (48%), Gaps = 3/137 (2%)

Query: 207  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            P   EAL  +   Q+  G      +T  G ++  G    G+LG G T    TP  +  ++
Sbjct: 3976 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQ 4035

Query: 267  EVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
             V    V + +G  + LA++  G VYS+G   +  LGHG +    +PR I++ R  GI V
Sbjct: 4036 HVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLR--GIEV 4093

Query: 326  VRVSAGDEHVVALDSSG 342
            V V+AG  H   + ++G
Sbjct: 4094 VDVAAGGAHSACVTAAG 4110



 Score = 41.2 bits (95), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 7/113 (6%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4007

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G V
Sbjct: 4008 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4060


>gi|195133162|ref|XP_002011008.1| GI16306 [Drosophila mojavensis]
 gi|193906983|gb|EDW05850.1| GI16306 [Drosophila mojavensis]
          Length = 5077

 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 108/229 (47%), Gaps = 9/229 (3%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAF 177
            G++   L  +  VFS G    G LGHG  +T  +   R +    A  +  ++   +H+A 
Sbjct: 3157 GKHALALTLDGKVFSWGEGEDGKLGHGNRST--LDKPRLVEALRAKKIRDIACGSSHSAA 3214

Query: 178  VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRG 235
            +   G+++T G       GH D N    +P+LV AL G    QV  G     T  LT  G
Sbjct: 3215 ISSQGELYTWGLGEYGRLGHGD-NATQLKPKLVAALSGRRVIQVACGSRDAQTLALTEDG 3273

Query: 236  HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
             V + G    G+LG G +    TP  I  L  +G V+QI  G  + LA+T  G V+++G 
Sbjct: 3274 AVFSWGDGDFGKLGRGGSEGSSTPHEIERLSGIG-VIQIECGAQFSLALTRAGEVWTWGK 3332

Query: 296  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            G  + LGHG      +P+ I   R  G  V+ V+ G  H +A+  +G V
Sbjct: 3333 GDYYRLGHGGDQHVRKPQPIAGLR--GHRVIHVAVGALHCLAVTDAGQV 3379



 Score = 84.0 bits (206), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 66/222 (29%), Positives = 107/222 (48%), Gaps = 11/222 (4%)

Query: 128  NSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSASENHAAFVLQSGQV 184
            +  V++CG    G LG G   T  V       +        V V +   HA  +   G+V
Sbjct: 3112 DGKVYACGEGTNGRLGLG--VTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKV 3169

Query: 185  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
            F+ G+      GH + +  + +PRLVEAL+    + +  G + +  ++ +G ++T G   
Sbjct: 3170 FSWGEGEDGKLGHGNRST-LDKPRLVEALRAKKIRDIACGSSHSAAISSQGELYTWGLGE 3228

Query: 245  HGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLG 302
            +G+LGHGD   +  PK +A L     V+Q+A G   +  LA+T +G V+S+G G    LG
Sbjct: 3229 YGRLGHGDNATQLKPKLVAALSG-RRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLG 3287

Query: 303  HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             G       P  I+  R  GI V+++  G +  +AL  +G V
Sbjct: 3288 RGGSEGSSTPHEIE--RLSGIGVIQIECGAQFSLALTRAGEV 3327



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 56/181 (30%), Positives = 88/181 (48%), Gaps = 6/181 (3%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAG 224
            V V++   H   +   G+V+  G+      GH   NR  + RP+LVE L G+    +  G
Sbjct: 4304 VAVNSGGKHCLALTTDGEVYAWGEGEDGKLGH--GNRMSYDRPKLVEHLNGMSVADIACG 4361

Query: 225  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLA 283
               +  +T  GHV T G   +G+LGHGD+ D+  PK +  L    ++ +   +G +  L 
Sbjct: 4362 SAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLC 4421

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I++    G+ V++V  G +  VAL  SG 
Sbjct: 4422 ITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESL--AGLGVIKVECGSQFSVALTKSGA 4479

Query: 344  V 344
            V
Sbjct: 4480 V 4480



 Score = 67.8 bits (164), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 72/284 (25%), Positives = 112/284 (39%), Gaps = 66/284 (23%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSAS 171
            + +G  H L L ++  V++ G    G LGHG      +S+ R   +   +   V  ++  
Sbjct: 4306 VNSGGKHCLALTTDGEVYAWGEGEDGKLGHGNR----MSYDRPKLVEHLNGMSVADIACG 4361

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG---------------- 215
              H+A +  SG V T G       GH D+   + RP+LVEAL G                
Sbjct: 4362 SAHSAAITASGHVLTWGKGRYGRLGHGDSEDQL-RPKLVEALLGYRAIDIACGSGDAQTL 4420

Query: 216  ----------------------------VPCK----------QVTAGLNFTGFLTIRGHV 237
                                        +P K          +V  G  F+  LT  G V
Sbjct: 4421 CITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAV 4480

Query: 238  HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            +T G     +LGHG       PK +A L+    ++ IA G  + +A +  G V+++G   
Sbjct: 4481 YTWGKGDFHRLGHGSVEHVRRPKKVAALQG-KKIISIATGSLHCVACSDAGEVFTWGDND 4539

Query: 298  NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
               LG G      +PR +     +G H+V+V+ G  H +AL +S
Sbjct: 4540 EGQLGDGTVTAIQRPRLVAAL--QGKHIVKVTCGSAHTLALSTS 4581



 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 97/225 (43%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  IS+   +++ G    G LGHG   TQ +    +   S   V+QV+     
Sbjct: 3205 IACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQ-LKPKLVAALSGRRVIQVACGSRD 3263

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    + + G VF+ GD      G R  +     P  +E L G+   Q+  G  F+  LT
Sbjct: 3264 AQTLALTEDGAVFSWGDGDFGKLG-RGGSEGSSTPHEIERLSGIGVIQIECGAQFSLALT 3322

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG       P+ IA L     V+ +A G  + LAVT  G VY+
Sbjct: 3323 RAGEVWTWGKGDYYRLGHGGDQHVRKPQPIAGLRG-HRVIHVAVGALHCLAVTDAGQVYA 3381

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G G      +P  +       + V RV+ G  H +A
Sbjct: 3382 WGDNDHGQQGSGNTFVNKKPALVIGL--DAVIVNRVACGSSHSMA 3424



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/161 (29%), Positives = 84/161 (52%), Gaps = 7/161 (4%)

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
           ++ G   S   GH D +     P  +E+L  +  K V  G +++  +T+ G+++T G  T
Sbjct: 668 YSWGVGDSRRLGHGDCHAREL-PTKIESLVRL-VKSVYCGCSYSAAITLGGNLYTWGRGT 725

Query: 245 HGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 303
           +G+LGHG + D+  P  +  L++   V V + +G ++ L +T  G+V+++G G    LG+
Sbjct: 726 YGRLGHGTSDDQCLPAMVMALKDHQVVDVALGSGDAHTLCLTSEGLVFAWGDGDYGKLGN 785

Query: 304 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G  +  L P+ I    R    V RV AG +  +AL   G +
Sbjct: 786 GSCNSSLLPQLIDCLPR----VQRVFAGAQFSLALSCEGQL 822



 Score = 54.3 bits (129), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 52/109 (47%), Gaps = 2/109 (1%)

Query: 236 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
           + ++ G     +LGHGD   R  P  I  L  V  V  +  G SY  A+T  G +Y++G 
Sbjct: 666 NAYSWGVGDSRRLGHGDCHARELPTKIESL--VRLVKSVYCGCSYSAAITLGGNLYTWGR 723

Query: 296 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G+   LGHG   D+  P  +   +   +  V + +GD H + L S G V
Sbjct: 724 GTYGRLGHGTSDDQCLPAMVMALKDHQVVDVALGSGDAHTLCLTSEGLV 772



 Score = 47.4 bits (111), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 45/184 (24%), Positives = 83/184 (45%), Gaps = 13/184 (7%)

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV-VQVSASENHAAFVL 179
           Y   +    ++++ G    G LGHG    QC+    +       V V + + + H   + 
Sbjct: 708 YSAAITLGGNLYTWGRGTYGRLGHGTSDDQCLPAMVMALKDHQVVDVALGSGDAHTLCLT 767

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             G VF  GD      G+   N  +  P+L++ L  V  ++V AG  F+  L+  G +++
Sbjct: 768 SEGLVFAWGDGDYGKLGNGSCNSSLL-PQLIDCLPRV--QRVFAGAQFSLALSCEGQLYS 824

Query: 240 CGSNTHGQLGHGDTLDR-----PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
            G  +   LGH   ++R       P+ I  L+    +V +A G ++ LA++ +G ++ +G
Sbjct: 825 WGKASC--LGH-QLVERNVQGCSVPRLITGLQH-KRIVDVAVGVAHCLALSSSGEIFGWG 880

Query: 295 SGSN 298
              N
Sbjct: 881 RNDN 884



 Score = 41.2 bits (95), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 48/110 (43%), Gaps = 5/110 (4%)

Query: 237  VHTCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
            V   G N   QLG   G  +  PT    +P       + IA G   +  V+ +G VY+ G
Sbjct: 3063 VMVWGLNDKEQLGGLKGSKVKVPT---FSPTISRLRPIHIAGGSKSLFVVSQDGKVYACG 3119

Query: 295  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             G+N  LG G  H+   P  +    +  +  V V +G +H +AL   G V
Sbjct: 3120 EGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKV 3169


>gi|379318630|pdb|4DNU|A Chain A, Crystal Structure Of The W285a Mutant Of Uvb-Resistance
           Protein Uvr8
          Length = 372

 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 71/229 (31%), Positives = 113/229 (49%), Gaps = 7/229 (3%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I+ G  H++ L+S   V S G    G LGHG +     S T+++      +V V+   +H
Sbjct: 11  ISAGASHSVALLSGDIVCSWGRGEDGQLGHG-DAEDRPSPTQLSALDGHQIVSVTCGADH 69

Query: 175 AAFVLQSG-QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
                QSG +V++ G       GH +++  +F P  ++AL G+  KQ+  G +    +T 
Sbjct: 70  TVAYSQSGXEVYSWGWGDFGRLGHGNSS-DLFTPLPIKALHGIRIKQIACGDSHCLAVTX 128

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V + G N +GQLG GDT D   P+ I   E +  +  +AAG  +  AVT +G +Y +
Sbjct: 129 EGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGI-RIKXVAAGAEHTAAVTEDGDLYGW 187

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           G G    LG G++ D L P  + +    G     V+ G  H +++  SG
Sbjct: 188 GWGRYGNLGLGDRTDRLVPERVTS--TGGEKXSXVACGWRHTISVSYSG 234



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 67/232 (28%), Positives = 108/232 (46%), Gaps = 9/232 (3%)

Query: 114 MQITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS 171
           + +T G  HT+  S S   V+S G    G LGHG  ++   +   I       + Q++  
Sbjct: 61  VSVTCGADHTVAYSQSGXEVYSWGWGDFGRLGHG-NSSDLFTPLPIKALHGIRIKQIACG 119

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           ++H   V   G+V + G N +   G  DT   +  P+ ++A +G+  K V AG   T  +
Sbjct: 120 DSHCLAVTXEGEVQSWGRNQNGQLGLGDTEDSLV-PQKIQAFEGIRIKXVAAGAEHTAAV 178

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE-EVGSVVQIAAGPSYMLAVTGNGVV 290
           T  G ++  G   +G LG GD  DR  P+ +     E  S V  A G  + ++V+ +G +
Sbjct: 179 TEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKXSXV--ACGWRHTISVSYSGAL 236

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           Y++G      LGHG+  D L P  ++        + ++S G  H  AL S G
Sbjct: 237 YTYGWSKYGQLGHGDLEDHLIPHKLEALSNS--FISQISGGARHTXALTSDG 286



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 65/180 (36%), Positives = 90/180 (50%), Gaps = 7/180 (3%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTA 223
           V+ +SA  +H+  +L    V + G       GH D  +RP   P  + AL G     VT 
Sbjct: 8   VLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRP--SPTQLSALDGHQIVSVTC 65

Query: 224 GLNFTGFLTIRG-HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
           G + T   +  G  V++ G    G+LGHG++ D  TP  I  L  +  + QIA G S+ L
Sbjct: 66  GADHTVAYSQSGXEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGI-RIKQIACGDSHCL 124

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           AVT  G V S+G   N  LG G+  D L P+ IQ F  +GI +  V+AG EH  A+   G
Sbjct: 125 AVTXEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAF--EGIRIKXVAAGAEHTAAVTEDG 182



 Score = 74.3 bits (181), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 95/209 (45%), Gaps = 6/209 (2%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HT  ++ +  ++  G    G LG G  T + V   R+          V+    H
Sbjct: 168 VAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVP-ERVTSTGGEKXSXVACGWRH 226

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V  SG ++T G +     GH D    +  P  +EAL      Q++ G   T  LT  
Sbjct: 227 TISVSYSGALYTYGWSKYGQLGHGDLEDHLI-PHKLEALSNSFISQISGGARHTXALTSD 285

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
           G ++  G N  GQ+G G+ LD+ +P  +  P ++   VVQ++ G  + LAVT    V+++
Sbjct: 286 GKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQ--KVVQVSCGWRHTLAVTERNNVFAW 343

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           G G+N  LG GE  D   P+ I+     G
Sbjct: 344 GRGTNGQLGIGESVDRNFPKIIEALSVDG 372


>gi|344298015|ref|XP_003420690.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
           HERC2-like [Loxodonta africana]
          Length = 4838

 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 111/237 (46%), Gaps = 17/237 (7%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 169
           + G ++  L +   V+S G    G LGHG       P+     S  +    +  HVV ++
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AGKHVVHIA 558

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
               ++A +   G+++T G  +    GH  +   +  P LV  LKG+    V  G     
Sbjct: 559 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEVI-PVLVAGLKGLKVIDVACGSGDAQ 617

Query: 230 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
            L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSIALTKD 676

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V
Sbjct: 677 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEV 731



 Score = 89.0 bits (219), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 72/228 (31%), Positives = 107/228 (46%), Gaps = 7/228 (3%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3058 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAI 3116

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3117 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3175

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3176 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3234

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G V
Sbjct: 3235 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDAGQV 3280



 Score = 87.8 bits (216), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 118/251 (47%), Gaps = 12/251 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+SV+H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4034 LLESVQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4087

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             +       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4088 VVESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4146

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4147 HRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4205

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4206 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4263

Query: 334  HVVALDSSGYV 344
            H V     G V
Sbjct: 4264 HCVCCTEDGEV 4274



 Score = 78.6 bits (192), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 68/221 (30%), Positives = 110/221 (49%), Gaps = 12/221 (5%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFT 186
             V++CG +  G LG G  ++  V   R     +++VV+   V +   HA  +   G+VF+
Sbjct: 3014 KVYACGEATNGRLGLG-LSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3072

Query: 187  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
             G+      GH  +     +PRL+EALK    + +  G + +  +T  G ++T G   +G
Sbjct: 3073 WGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYG 3131

Query: 247  QLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGH 303
            +LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG 
Sbjct: 3132 RLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGR 3189

Query: 304  GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            G       P+ I+  R  G  V ++  G +  +AL  SG V
Sbjct: 3190 GGSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVV 3228



 Score = 74.3 bits (181), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 57/187 (30%), Positives = 93/187 (49%), Gaps = 20/187 (10%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++ +E     + +SG+V+T   NS               P+LV+ L      ++ A 
Sbjct: 454 VTQIACAEKRFLILSRSGRVYTQAYNSD-----------ALAPQLVQGLASRNIIKIAAH 502

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE+ P  +     KG+ V+ V+  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEVIPVLVAGL--KGLKVIDVACGSGDAQTLA 620

Query: 338 LDSSGYV 344
           +  +G V
Sbjct: 621 VTENGQV 627



 Score = 74.3 bits (181), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 91/190 (47%), Gaps = 11/190 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2992 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPI--PRQITALSSYVV 3049

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L +   +  IA 
Sbjct: 3050 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL-KTKRIRDIAC 3108

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3109 GSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3166

Query: 335  VVALDSSGYV 344
             +AL   G V
Sbjct: 3167 TLALTDEGLV 3176



 Score = 67.8 bits (164), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  I++S  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3106 IACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3164

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3165 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3223

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 3224 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDAGQVYA 3282

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3283 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3325



 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/162 (30%), Positives = 77/162 (47%), Gaps = 5/162 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2962 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3020

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3021 ATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3080

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            LGH  + +  +PR I+  + K I    ++ G  H  A+ SSG
Sbjct: 3081 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAAITSSG 3120



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 82/177 (46%), Gaps = 5/177 (2%)

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA--FV 178
           Y   + +   +++ G    G LGHG    + +            V+ V+     A    V
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEVIPVLVAGL-KGLKVIDVACGSGDAQTLAV 621

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
            ++GQV++ GD      G R  +     P+L+E L+ +   +V  G  F+  LT  G V+
Sbjct: 622 TENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 680

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
           + G   + +LGHG       PK +  L+    V+ +AAG ++ LA+T +  V+S+GS
Sbjct: 681 SWGKGDNQRLGHGTEEHVRYPKLLEGLQG-KKVIDVAAGSTHCLALTEDSEVHSWGS 736



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4156 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4214

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4215 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4273

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4274 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4319



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 671

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 731 VHSWGSNDQCQ--HFDTLRVTKPEPSALPGL-DTKHIVGIACGPAQSFA 776



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122  HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 3166 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 3224

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SG V+T G    F  GH  ++  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 3225 SGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAW 3283

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 3284 GDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 3327



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 67/137 (48%), Gaps = 3/137 (2%)

Query: 207  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            P   EAL  +   Q+  G      +T  G ++  G    G+LG G T    TP  +  ++
Sbjct: 3980 PTPCEALAALRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESVQ 4039

Query: 267  EVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
             V    V + +G  + LA++  G VYS+G   +  LGHG +    +PR +++ R  GI V
Sbjct: 4040 HVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVVESLR--GIEV 4097

Query: 326  VRVSAGDEHVVALDSSG 342
            V V+AG  H   + ++G
Sbjct: 4098 VDVAAGGAHSACVTAAG 4114



 Score = 40.8 bits (94), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 7/113 (6%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3956 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPV----QLIGGEQTLFAVTADGKLY 4011

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G V
Sbjct: 4012 ATGYGAGGRLGIGGTESVSTPTLLESVQHVFIKKVAVNSGGKHCLALSSEGEV 4064


>gi|312433980|ref|NP_084390.1| probable E3 ubiquitin-protein ligase HERC4 isoform 1 [Mus musculus]
 gi|126215720|sp|Q6PAV2.2|HERC4_MOUSE RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           4
          Length = 1057

 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 77/252 (30%), Positives = 119/252 (47%), Gaps = 10/252 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLG-HGPETTQCVSF 154
           +S +    +V   A N+  +  G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +V+ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQ 304

Query: 334 HVVA-LDSSGYV 344
           H  A + SSG +
Sbjct: 305 HTSAFVPSSGRI 316



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 108/226 (47%), Gaps = 7/226 (3%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V V+  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVACGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G + +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCQKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGV 263



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   I        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V Q+A G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 86/191 (45%), Gaps = 8/191 (4%)

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           R +F     V  V     H  FVL  G V+TCG N     GH  + +   +P  V AL  
Sbjct: 27  RSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDA 83

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGDTLDRPTPKSIAPLEEVGSVVQI 274
                V  G   T  L  +G V+  G ++ GQLG  G       P++I  L ++  +VQ+
Sbjct: 84  QNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDI-QIVQV 142

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           A G  + LA++    V+ +G      LG G +   +  P+ I++    GI  ++V+AG  
Sbjct: 143 ACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLL--GIPFMQVAAGGA 200

Query: 334 HVVALDSSGYV 344
           H   L  SG +
Sbjct: 201 HSFVLTLSGAI 211



 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 71/142 (50%), Gaps = 6/142 (4%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG-HGEQHDELQPRAIQTFRRKG 322
            L +  ++V +A G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  AL-DAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSL--SD 136

Query: 323 IHVVRVSAGDEHVVALDSSGYV 344
           I +V+V+ G  H +AL  +  V
Sbjct: 137 IQIVQVACGYYHSLALSKASEV 158


>gi|410265950|gb|JAA20941.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 73/228 (32%), Positives = 107/228 (46%), Gaps = 7/228 (3%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3056 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3114

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3115 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3173

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3174 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3232

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG V
Sbjct: 3233 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQV 3278



 Score = 87.8 bits (216), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 110/237 (46%), Gaps = 17/237 (7%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 169
           + G ++  L +   V+S G    G LGHG       P+     S  +    +  HVV ++
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AGKHVVHIA 557

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G     
Sbjct: 558 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQ 616

Query: 230 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
            L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +
Sbjct: 617 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSIALTKD 675

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V
Sbjct: 676 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEV 730



 Score = 87.8 bits (216), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 118/251 (47%), Gaps = 12/251 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4030 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4083

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4084 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4142

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4143 HRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4201

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4202 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4259

Query: 334  HVVALDSSGYV 344
            H V     G V
Sbjct: 4260 HCVCCTEDGEV 4270



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/221 (31%), Positives = 110/221 (49%), Gaps = 12/221 (5%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFT 186
             V++CG +  G LG G  ++  V   R     +++VV+   V +   HA  +   G+VF+
Sbjct: 3012 KVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3070

Query: 187  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
             G+      GH  +     +PRL+EALK    + +  G + +  LT  G ++T G   +G
Sbjct: 3071 WGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 3129

Query: 247  QLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGH 303
            +LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG 
Sbjct: 3130 RLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGR 3187

Query: 304  GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            G       P+ I+  R  G  V ++  G +  +AL  SG V
Sbjct: 3188 GGSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVV 3226



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/187 (31%), Positives = 94/187 (50%), Gaps = 20/187 (10%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 501

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 561

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 562 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 619

Query: 338 LDSSGYV 344
           +  +G V
Sbjct: 620 VTENGQV 626



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 91/190 (47%), Gaps = 11/190 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2990 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3047

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L +   +  IA 
Sbjct: 3048 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL-KTKRIRDIAC 3106

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3107 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3164

Query: 335  VVALDSSGYV 344
             +AL   G V
Sbjct: 3165 TLALTDEGLV 3174



 Score = 67.8 bits (164), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3104 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3162

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3163 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3221

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3222 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3280

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3281 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3323



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 77/162 (47%), Gaps = 5/162 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2960 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3018

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3019 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3078

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG
Sbjct: 3079 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSG 3118



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 82/177 (46%), Gaps = 5/177 (2%)

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA--FV 178
           Y   + +   +++ G    G LGHG    + +            V+ V+     A    V
Sbjct: 562 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAV 620

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
            ++GQV++ GD      G R  +     P+L+E L+ +   +V  G  F+  LT  G V+
Sbjct: 621 TENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 679

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
           + G   + +LGHG       PK +  L+    V+ +AAG ++ LA+T +  V+S+GS
Sbjct: 680 SWGKGDNQRLGHGTEEHVRYPKLLEGLQG-KKVIDVAAGSTHCLALTEDSEVHSWGS 735



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4152 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4210

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4211 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4269

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4270 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4315



 Score = 55.1 bits (131), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 730 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 775



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122  HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 3164 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 3222

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SG V+T G    F  GH  ++  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 3223 SGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3281

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 3282 GDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 3325



 Score = 47.8 bits (112), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 67/137 (48%), Gaps = 3/137 (2%)

Query: 207  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            P   EAL  +   Q+  G      +T  G ++  G    G+LG G T    TP  +  ++
Sbjct: 3976 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQ 4035

Query: 267  EVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
             V    V + +G  + LA++  G VYS+G   +  LGHG +    +PR I++ R  GI V
Sbjct: 4036 HVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLR--GIEV 4093

Query: 326  VRVSAGDEHVVALDSSG 342
            V V+AG  H   + ++G
Sbjct: 4094 VDVAAGGAHSACVTAAG 4110



 Score = 41.2 bits (95), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 7/113 (6%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4007

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G V
Sbjct: 4008 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4060


>gi|229442359|gb|AAI72911.1| hect domain and RLD 2 [synthetic construct]
          Length = 2427

 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 73/228 (32%), Positives = 107/228 (46%), Gaps = 7/228 (3%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 649 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 707

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
             SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 708 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 766

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 767 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 825

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG V
Sbjct: 826 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQV 871



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 118/251 (47%), Gaps = 12/251 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 1623 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 1676

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 1677 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 1735

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 1736 HRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 1794

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 1795 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 1852

Query: 334  HVVALDSSGYV 344
            H V     G V
Sbjct: 1853 HCVCCTEDGEV 1863



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 69/220 (31%), Positives = 110/220 (50%), Gaps = 12/220 (5%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFTC 187
           V++CG +  G LG G  ++  V   R     +++VV+   V +   HA  +   G+VF+ 
Sbjct: 606 VYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSW 664

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G+      GH  +     +PRL+EALK    + +  G + +  LT  G ++T G   +G+
Sbjct: 665 GEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 723

Query: 248 LGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGHG 304
           LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG G
Sbjct: 724 LGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 781

Query: 305 EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
                  P+ I+  R  G  V ++  G +  +AL  SG V
Sbjct: 782 GSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVV 819



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 91/190 (47%), Gaps = 11/190 (5%)

Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
           SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 583 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 640

Query: 219 KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
           K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L +   +  IA 
Sbjct: 641 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL-KTKRIRDIAC 699

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
           G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 700 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 757

Query: 335 VVALDSSGYV 344
            +AL   G V
Sbjct: 758 TLALTDEGLV 767



 Score = 68.2 bits (165), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 100/227 (44%), Gaps = 8/227 (3%)

Query: 115 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+    
Sbjct: 696 DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSR 754

Query: 174 HAA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  L
Sbjct: 755 DAQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 813

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           T  G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY
Sbjct: 814 TKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVY 872

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           ++G   +   G+G      +P  +Q    +G  + RV+ G  H VA 
Sbjct: 873 AWGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVAW 917



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 77/162 (47%), Gaps = 5/162 (3%)

Query: 183 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
           +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 553 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 611

Query: 243 NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
            T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 612 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 671

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           LGH  + +  +PR I+  + K I    ++ G  H  AL SSG
Sbjct: 672 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSG 711



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 1745 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 1803

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 1804 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 1862

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 1863 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 1908



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122 HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 757 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 815

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           SG V+T G    F  GH  ++  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 816 SGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 874

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
           G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 875 GDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 918



 Score = 47.8 bits (112), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 67/137 (48%), Gaps = 3/137 (2%)

Query: 207  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            P   EAL  +   Q+  G      +T  G ++  G    G+LG G T    TP  +  ++
Sbjct: 1569 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQ 1628

Query: 267  EVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
             V    V + +G  + LA++  G VYS+G   +  LGHG +    +PR I++ R  GI V
Sbjct: 1629 HVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLR--GIEV 1686

Query: 326  VRVSAGDEHVVALDSSG 342
            V V+AG  H   + ++G
Sbjct: 1687 VDVAAGGAHSACVTAAG 1703



 Score = 40.8 bits (94), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 7/113 (6%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 1545 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 1600

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G V
Sbjct: 1601 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 1653


>gi|255081710|ref|XP_002508077.1| E3 ubiquitin-protein ligase [Micromonas sp. RCC299]
 gi|226523353|gb|ACO69335.1| E3 ubiquitin-protein ligase [Micromonas sp. RCC299]
          Length = 1348

 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 85/292 (29%), Positives = 129/292 (44%), Gaps = 28/292 (9%)

Query: 79  QIELLNRCNGNWKRV---LRFLQSVEHSSDIVETSAGNMQITT---GRYHTLLISNSSVF 132
           ++     C+G  K +    R  ++V    ++  T+    ++ T   G+ H   ++ S V 
Sbjct: 228 EVYAFGDCSGEGKALSAPTRLREAVIDPPEVTATTNAMPRVATVACGQRHCAAVTTSGVL 287

Query: 133 -SCGSSLCGVLGHGPETT-----QCVSFTR--------INFPSAAHV--VQVSASENHAA 176
            S G+   G LG GP           S  R             + HV    V+    H  
Sbjct: 288 LSWGNEEFGQLGQGPPRDSSSKGDAKSLIRRRADASMMPRLVGSGHVKFTSVACGAGHTL 347

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 235
            +  +G+VF+ G  +    GH D  N  +  PRLV+AL GV   Q+ AG N +  L+  G
Sbjct: 348 ALTANGRVFSFGRGAFGALGHGDRLNCDV--PRLVDALWGVGVAQIAAGDNHSASLSASG 405

Query: 236 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVT--GNGVVYS 292
            V+T G   +G LGH D  +R  P  +  L++ G    QIA G  + LA+   G+GV+ +
Sbjct: 406 RVYTWGRGKYGALGHRDVDNRSRPTPVQALDDAGVRCEQIACGGDHTLAIAGGGSGVLLA 465

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           +G GS+   G G   D L P  I         V ++SAG +H VA+   G V
Sbjct: 466 WGRGSSGPAGTGATADVLTPTIIDRALLGDEKVFQISAGSKHSVAVTEGGCV 517



 Score = 81.3 bits (199), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 72/197 (36%), Positives = 97/197 (49%), Gaps = 14/197 (7%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HTL L +N  VFS G    G LGHG +   C     ++      V Q++A +NH
Sbjct: 339 VACGAGHTLALTANGRVFSFGRGAFGALGHG-DRLNCDVPRLVDALWGVGVAQIAAGDNH 397

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALK--GVPCKQVTAGLNFTGFL 231
           +A +  SG+V+T G       GHRD  NR   RP  V+AL   GV C+Q+  G + T  L
Sbjct: 398 SASLSASGRVYTWGRGKYGALGHRDVDNRS--RPTPVQALDDAGVRCEQIACGGDHT--L 453

Query: 232 TIRGH----VHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTG 286
            I G     +   G  + G  G G T D  TP  I   L     V QI+AG  + +AVT 
Sbjct: 454 AIAGGGSGVLLAWGRGSSGPAGTGATADVLTPTIIDRALLGDEKVFQISAGSKHSVAVTE 513

Query: 287 NGVVYSFGSGSNFCLGH 303
            G VY++G+ +   LGH
Sbjct: 514 GGCVYTWGARTQGQLGH 530


>gi|148700105|gb|EDL32052.1| hect domain and RLD 4, isoform CRA_b [Mus musculus]
          Length = 1066

 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 77/252 (30%), Positives = 119/252 (47%), Gaps = 10/252 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLG-HGPETTQCVSF 154
           +S +    +V   A N+  +  G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 79  KSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSE--ECIRV 136

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 137 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSL 196

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 197 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 255

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +V+ G +
Sbjct: 256 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQ 313

Query: 334 HVVA-LDSSGYV 344
           H  A + SSG +
Sbjct: 314 HTSAFVPSSGRI 325



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 108/226 (47%), Gaps = 7/226 (3%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V V+  E H   + 
Sbjct: 53  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVACGEAHTLALN 109

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G + +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 110 DKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 169

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 170 WGQNKYGQLGLGIDCQKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 228

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V
Sbjct: 229 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGV 272



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   I        +QV+A  
Sbjct: 149 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGG 208

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 209 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 267

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V Q+A G  +  A V  +G +
Sbjct: 268 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHTSAFVPSSGRI 325

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 326 YSFGLGGNGQLGTGSTSNRKSPFTVK 351



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 97/218 (44%), Gaps = 9/218 (4%)

Query: 130 SVFSCGSSLCGVLGHGPETTQCV-SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
           S+   G++  G LG G    + V    R +F     V  V     H  FVL  G V+TCG
Sbjct: 9   SMLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG 68

Query: 189 DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 248
            N     GH  + +   +P  V AL       V  G   T  L  +G V+  G ++ GQL
Sbjct: 69  CNDLGQLGHEKSRK---KPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQL 125

Query: 249 G-HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQ 306
           G  G       P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G + 
Sbjct: 126 GLQGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDC 184

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             +  P+ I++    GI  ++V+AG  H   L  SG +
Sbjct: 185 QKQTSPQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAI 220


>gi|47219890|emb|CAF97160.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 4588

 Score = 89.0 bits (219), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 71/234 (30%), Positives = 113/234 (48%), Gaps = 11/234 (4%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP--SAAHVVQVSASE 172
           I  G+Y T  +S + SV +CG    G LG G    Q +    +  P  +   V     S+
Sbjct: 374 IEAGQYCTFSVSTDGSVKACGKGSYGRLGLGDSNNQSMPKKLVLEPHRNIKKVFSSKGSD 433

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGFL 231
            H   +   G+VF+ GD      GH ++    + P++V+  L        +AG   +  +
Sbjct: 434 GHTLAITVDGEVFSWGDGEYGKLGHGNSATQKY-PKIVQGPLFSKIVVSASAGYRHSAAV 492

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-VV 290
           T  G ++T G    G+LGH D+  R TP  +  +  VG   Q+A G S+ +AV  +G  +
Sbjct: 493 TNDGELYTWGEGDFGRLGHSDSQSRNTPTLVKDISGVG---QVACGSSHTIAVAQDGRTM 549

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           +SFG G N  LGHG+ +   +P+ I+     G  + +V AG +  +AL S+G V
Sbjct: 550 WSFGGGDNGKLGHGDTNRVYRPKVIEALH--GFIIRKVCAGSQSSLALTSAGQV 601



 Score = 80.9 bits (198), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 65/221 (29%), Positives = 104/221 (47%), Gaps = 6/221 (2%)

Query: 125  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
            L     VFS G    G LGHG    Q     +I       VVQ++    H+A V   G++
Sbjct: 3781 LTETGEVFSWGDGDFGKLGHGNNERQ-RRPKQIEALQGEDVVQLACGFRHSAVVTADGKL 3839

Query: 185  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHTCGSN 243
            FT G   S   G R T+  + +P  V AL+G    QV+ GLN T  L++ G  V   G  
Sbjct: 3840 FTFGSGESGRLGQRSTSNKM-QPERVAALEGYHVGQVSCGLNHTLVLSLDGMAVWAFGDG 3898

Query: 244  THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 303
             +G+LG G +  +  P+ +  L   G + ++  G  + + +  +G VY+FG      L  
Sbjct: 3899 DYGKLGAGSSTAKYYPQKVEQLCNKG-MKKVCCGAQFSVVLATDGHVYTFGQERLIGLPD 3957

Query: 304  GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
                +   P+ + +   +G+ +  ++ G EHV+AL S+G +
Sbjct: 3958 SMLKNRSNPQVVPSL--EGLFIEDIAVGCEHVLALSSTGDI 3996



 Score = 80.9 bits (198), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 67/234 (28%), Positives = 112/234 (47%), Gaps = 8/234 (3%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS--AAHVVQVSAS 171
            Q+  G+  + LI SN +V + G    G LG G      V      F       +V    S
Sbjct: 3715 QVVCGQNCSFLIQSNGAVMAVGEGQYGRLGQGNSDDLFVPTIISAFQGYVVTQLVTSCGS 3774

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
            + H+  + ++G+VF+ GD      GH +  R   RP+ +EAL+G    Q+  G   +  +
Sbjct: 3775 DGHSMALTETGEVFSWGDGDFGKLGHGNNERQ-RRPKQIEALQGEDVVQLACGFRHSAVV 3833

Query: 232  TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV-V 290
            T  G + T GS   G+LG   T ++  P+ +A LE    V Q++ G ++ L ++ +G+ V
Sbjct: 3834 TADGKLFTFGSGESGRLGQRSTSNKMQPERVAALEGY-HVGQVSCGLNHTLVLSLDGMAV 3892

Query: 291  YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            ++FG G    LG G    +  P+ ++    KG+   +V  G +  V L + G+V
Sbjct: 3893 WAFGDGDYGKLGAGSSTAKYYPQKVEQLCNKGMK--KVCCGAQFSVVLATDGHV 3944



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 66/258 (25%), Positives = 116/258 (44%), Gaps = 26/258 (10%)

Query: 87  NGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGP 146
           N   ++  + +Q    S  +V  SAG       R+   + ++  +++ G    G LGH  
Sbjct: 460 NSATQKYPKIVQGPLFSKIVVSASAGY------RHSAAVTNDGELYTWGEGDFGRLGHSD 513

Query: 147 ETTQCVSFTRINFPSAAH----VVQVSASENHAAFVLQSGQV---FTCGDNSSFCCGHRD 199
             ++       N P+       V QV+   +H   V Q G+    F  GDN     GH D
Sbjct: 514 SQSR-------NTPTLVKDISGVGQVACGSSHTIAVAQDGRTMWSFGGGDNGKL--GHGD 564

Query: 200 TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP 259
           TNR ++RP+++EAL G   ++V AG   +  LT  G V   G  +    G  +T     P
Sbjct: 565 TNR-VYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSCLGCGSSETTSL-RP 622

Query: 260 KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
           + +  L  +  ++ I+ G S+ LA++    VY++G+ +    G G     +  R  +   
Sbjct: 623 RFVEDLS-ITKIIDISCGDSHCLALSHENEVYAWGNNTMGQCGQGHTSTPIT-RPKKVLG 680

Query: 320 RKGIHVVRVSAGDEHVVA 337
            +G+ + +++AG  H +A
Sbjct: 681 LEGVSIQQITAGTSHSLA 698



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 94/209 (44%), Gaps = 7/209 (3%)

Query: 81  ELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNS--SVFSCGSSL 138
           EL     G++ R+        ++  +V+  +G  Q+  G  HT+ ++    +++S G   
Sbjct: 497 ELYTWGEGDFGRLGHSDSQSRNTPTLVKDISGVGQVACGSSHTIAVAQDGRTMWSFGGGD 556

Query: 139 CGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHR 198
            G LGHG +T +      I       + +V A    +  +  +GQVF  G  S   CG  
Sbjct: 557 NGKLGHG-DTNRVYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSCLGCGSS 615

Query: 199 DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT 258
           +T     RPR VE L       ++ G +    L+    V+  G+NT GQ G G T    T
Sbjct: 616 ETTS--LRPRFVEDLSITKIIDISCGDSHCLALSHENEVYAWGNNTMGQCGQGHTSTPIT 673

Query: 259 -PKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
            PK +  LE V S+ QI AG S+ LA T 
Sbjct: 674 RPKKVLGLEGV-SIQQITAGTSHSLAWTA 701



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/161 (29%), Positives = 73/161 (45%), Gaps = 6/161 (3%)

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           V+  G NSS       T   I  P+L +       + + AG   T  ++  G V  CG  
Sbjct: 340 VYVWGSNSSHQLAE-GTLEKILLPKLTQGFSDA--QTIEAGQYCTFSVSTDGSVKACGKG 396

Query: 244 THGQLGHGDTLDRPTPKSIA--PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 301
           ++G+LG GD+ ++  PK +   P   +  V        + LA+T +G V+S+G G    L
Sbjct: 397 SYGRLGLGDSNNQSMPKKLVLEPHRNIKKVFSSKGSDGHTLAITVDGEVFSWGDGEYGKL 456

Query: 302 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           GHG    +  P+ +Q      I VV  SAG  H  A+ + G
Sbjct: 457 GHGNSATQKYPKIVQGPLFSKI-VVSASAGYRHSAAVTNDG 496



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 62/132 (46%), Gaps = 8/132 (6%)

Query: 217  PC----KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGS 270
            PC    +QV  G N +  +   G V   G   +G+LG G++ D   P  I+  +   V  
Sbjct: 3708 PCLSQTQQVVCGQNCSFLIQSNGAVMAVGEGQYGRLGQGNSDDLFVPTIISAFQGYVVTQ 3767

Query: 271  VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
            +V       + +A+T  G V+S+G G    LGHG    + +P+ I+    +G  VV+++ 
Sbjct: 3768 LVTSCGSDGHSMALTETGEVFSWGDGDFGKLGHGNNERQRRPKQIEAL--QGEDVVQLAC 3825

Query: 331  GDEHVVALDSSG 342
            G  H   + + G
Sbjct: 3826 GFRHSAVVTADG 3837


>gi|148700108|gb|EDL32055.1| hect domain and RLD 4, isoform CRA_e [Mus musculus]
          Length = 928

 Score = 89.0 bits (219), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 77/252 (30%), Positives = 119/252 (47%), Gaps = 10/252 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLG-HGPETTQCVSF 154
           +S +    +V   A N+  +  G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +V+ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQ 304

Query: 334 HVVA-LDSSGYV 344
           H  A + SSG +
Sbjct: 305 HTSAFVPSSGRI 316



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 108/226 (47%), Gaps = 7/226 (3%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V V+  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVACGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G + +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCQKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGV 263



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   I        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V Q+A G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 86/191 (45%), Gaps = 8/191 (4%)

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           R +F     V  V     H  FVL  G V+TCG N     GH  + +   +P  V AL  
Sbjct: 27  RSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDA 83

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGDTLDRPTPKSIAPLEEVGSVVQI 274
                V  G   T  L  +G V+  G ++ GQLG  G       P++I  L ++  +VQ+
Sbjct: 84  QNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDI-QIVQV 142

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           A G  + LA++    V+ +G      LG G +   +  P+ I++    GI  ++V+AG  
Sbjct: 143 ACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLL--GIPFMQVAAGGA 200

Query: 334 HVVALDSSGYV 344
           H   L  SG +
Sbjct: 201 HSFVLTLSGAI 211



 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 71/142 (50%), Gaps = 6/142 (4%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG-HGEQHDELQPRAIQTFRRKG 322
            L +  ++V +A G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  AL-DAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSL--SD 136

Query: 323 IHVVRVSAGDEHVVALDSSGYV 344
           I +V+V+ G  H +AL  +  V
Sbjct: 137 IQIVQVACGYYHSLALSKASEV 158


>gi|148689921|gb|EDL21868.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 2, isoform CRA_a [Mus
            musculus]
          Length = 4902

 Score = 89.0 bits (219), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 73/228 (32%), Positives = 107/228 (46%), Gaps = 7/228 (3%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3123 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3181

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3182 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3240

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3241 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3299

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG V
Sbjct: 3300 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQV 3345



 Score = 87.8 bits (216), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 118/251 (47%), Gaps = 12/251 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4098 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4151

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4152 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4210

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4211 HRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4269

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4270 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4327

Query: 334  HVVALDSSGYV 344
            H V     G V
Sbjct: 4328 HCVCCTEDGEV 4338



 Score = 87.4 bits (215), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 67/237 (28%), Positives = 110/237 (46%), Gaps = 17/237 (7%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 169
           + G ++  L +   V+S G    G LGHG       P+     S  +    +  HVV ++
Sbjct: 571 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AGKHVVHIA 626

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G     
Sbjct: 627 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQ 685

Query: 230 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
            L +   G V + G   +G+LG G +    TPK I  L+++  V+++  G  + +A+T +
Sbjct: 686 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVIKVRCGSQFSIALTKD 744

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V
Sbjct: 745 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEV 799



 Score = 80.9 bits (198), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 70/221 (31%), Positives = 110/221 (49%), Gaps = 12/221 (5%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFT 186
             V+SCG +  G LG G  ++  V   R     +++VV+   V +   HA  +   G+VF+
Sbjct: 3079 KVYSCGEATNGRLGLG-MSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3137

Query: 187  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
             G+      GH  +     +PRL+EALK    + +  G + +  LT  G ++T G   +G
Sbjct: 3138 WGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 3196

Query: 247  QLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGH 303
            +LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG 
Sbjct: 3197 RLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGR 3254

Query: 304  GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            G       P+ I+  R  G  V ++  G +  +AL  SG V
Sbjct: 3255 GGSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVV 3293



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 57/187 (30%), Positives = 94/187 (50%), Gaps = 20/187 (10%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V+QV+ +E     + ++G+V+T   NS            +  P+LV+ L      ++ A 
Sbjct: 522 VMQVACAEKRFLILSRNGRVYTQAYNSD-----------MLAPQLVQGLASRNIVKIAAH 570

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 571 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 630

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 631 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 688

Query: 338 LDSSGYV 344
           +  +G V
Sbjct: 689 VTENGQV 695



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 92/190 (48%), Gaps = 11/190 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V++CG+  N     G      PI  PR + AL     
Sbjct: 3057 SALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPI--PRQITALSSYVV 3114

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L +   +  IA 
Sbjct: 3115 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL-KTKRIRDIAC 3173

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3174 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3231

Query: 335  VVALDSSGYV 344
             +AL   G V
Sbjct: 3232 TLALTDEGLV 3241



 Score = 67.8 bits (164), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3171 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3229

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3230 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3288

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3289 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3347

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3348 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3390



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 78/162 (48%), Gaps = 5/162 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V++CG 
Sbjct: 3027 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGE 3085

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3086 ATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3145

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG
Sbjct: 3146 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSG 3185



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 82/177 (46%), Gaps = 5/177 (2%)

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA--FV 178
           Y   + +   +++ G    G LGHG    + +            V+ V+     A    V
Sbjct: 631 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAV 689

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
            ++GQV++ GD      G R  +     P+L+E L+ +   +V  G  F+  LT  G V+
Sbjct: 690 TENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVY 748

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
           + G   + +LGHG       PK +  L+    V+ +AAG ++ LA+T +  V+S+GS
Sbjct: 749 SWGKGDNQRLGHGTEEHVRYPKLLEGLQG-KKVIDVAAGSTHCLALTEDSEVHSWGS 804



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4220 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4278

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4279 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4337

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4338 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4383



 Score = 54.3 bits (129), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       V++V      + 
Sbjct: 681 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVIKVRCGSQFSI 739

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 740 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 798

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L+    +V IA GP+   A
Sbjct: 799 VHSWGSNDQCQ--HFDTLRVTKPEPTALPGLDS-KHIVGIACGPAQSFA 844



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122  HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 3231 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 3289

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SG V+T G    F  GH  ++  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 3290 SGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3348

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 3349 GDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 3392



 Score = 47.8 bits (112), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 67/137 (48%), Gaps = 3/137 (2%)

Query: 207  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            P   EAL  +   Q+  G      +T  G ++  G    G+LG G T    TP  +  ++
Sbjct: 4044 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQ 4103

Query: 267  EVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
             V    V + +G  + LA++  G VYS+G   +  LGHG +    +PR I++ R  GI V
Sbjct: 4104 HVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLR--GIEV 4161

Query: 326  VRVSAGDEHVVALDSSG 342
            V V+AG  H   + ++G
Sbjct: 4162 VDVAAGGAHSACVTAAG 4178



 Score = 41.2 bits (95), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 7/113 (6%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 4020 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4075

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G V
Sbjct: 4076 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4128


>gi|32451488|ref|NP_080377.2| probable E3 ubiquitin-protein ligase HERC4 isoform 2 [Mus musculus]
 gi|29144941|gb|AAH43082.1| Hect domain and RLD 4 [Mus musculus]
 gi|74188723|dbj|BAE28095.1| unnamed protein product [Mus musculus]
 gi|148700106|gb|EDL32053.1| hect domain and RLD 4, isoform CRA_c [Mus musculus]
          Length = 1049

 Score = 89.0 bits (219), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 77/252 (30%), Positives = 119/252 (47%), Gaps = 10/252 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLG-HGPETTQCVSF 154
           +S +    +V   A N+  +  G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +V+ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQ 304

Query: 334 HVVA-LDSSGYV 344
           H  A + SSG +
Sbjct: 305 HTSAFVPSSGRI 316



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 108/226 (47%), Gaps = 7/226 (3%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V V+  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVACGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G + +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCQKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGV 263



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   I        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V Q+A G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 86/191 (45%), Gaps = 8/191 (4%)

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           R +F     V  V     H  FVL  G V+TCG N     GH  + +   +P  V AL  
Sbjct: 27  RSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDA 83

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGDTLDRPTPKSIAPLEEVGSVVQI 274
                V  G   T  L  +G V+  G ++ GQLG  G       P++I  L ++  +VQ+
Sbjct: 84  QNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDI-QIVQV 142

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           A G  + LA++    V+ +G      LG G +   +  P+ I++    GI  ++V+AG  
Sbjct: 143 ACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLL--GIPFMQVAAGGA 200

Query: 334 HVVALDSSGYV 344
           H   L  SG +
Sbjct: 201 HSFVLTLSGAI 211



 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 71/142 (50%), Gaps = 6/142 (4%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG-HGEQHDELQPRAIQTFRRKG 322
            L +  ++V +A G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  AL-DAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSL--SD 136

Query: 323 IHVVRVSAGDEHVVALDSSGYV 344
           I +V+V+ G  H +AL  +  V
Sbjct: 137 IQIVQVACGYYHSLALSKASEV 158


>gi|74226109|dbj|BAE25272.1| unnamed protein product [Mus musculus]
          Length = 1057

 Score = 89.0 bits (219), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 77/252 (30%), Positives = 119/252 (47%), Gaps = 10/252 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLG-HGPETTQCVSF 154
           +S +    +V   A N+  +  G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +V+ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQ 304

Query: 334 HVVA-LDSSGYV 344
           H  A + SSG +
Sbjct: 305 HTSAFVPSSGRI 316



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 108/226 (47%), Gaps = 7/226 (3%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V V+  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVACGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G + +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCQKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGV 263



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   I        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V Q+A G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 86/191 (45%), Gaps = 8/191 (4%)

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           R +F     V  V     H  FVL  G V+TCG N     GH  + +   +P  V AL  
Sbjct: 27  RSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDA 83

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGDTLDRPTPKSIAPLEEVGSVVQI 274
                V  G   T  L  +G V+  G ++ GQLG  G       P++I  L ++  +VQ+
Sbjct: 84  QNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDI-QIVQV 142

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           A G  + LA++    V+ +G      LG G +   +  P+ I++    GI  ++V+AG  
Sbjct: 143 ACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLL--GIPFMQVAAGGA 200

Query: 334 HVVALDSSGYV 344
           H   L  SG +
Sbjct: 201 HSFVLTLSGAI 211



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 71/142 (50%), Gaps = 6/142 (4%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG-HGEQHDELQPRAIQTFRRKG 322
            L +  ++V +A G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  AL-DAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSL--SD 136

Query: 323 IHVVRVSAGDEHVVALDSSGYV 344
           I +V+V+ G  H +AL  +  V
Sbjct: 137 IQIVQVACGYYHSLALSKASEV 158


>gi|357163608|ref|XP_003579788.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
           [Brachypodium distachyon]
          Length = 449

 Score = 89.0 bits (219), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 111/228 (48%), Gaps = 5/228 (2%)

Query: 116 ITTGRYHTLLISNSSVF-SCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           ++ G  H++ +   +V  S G    G LGHG    + V      F +      +  +++ 
Sbjct: 26  VSAGASHSVALLEGNVLCSWGRGEDGQLGHGDAEDRLVPTVISGFDAPRITSVICGADHT 85

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
            A+  +  QV++ G       GH +++  +F P+ V AL+G+  KQ+  G +    +T+ 
Sbjct: 86  TAYSEEEQQVYSWGWGDFGRLGHGNSSD-VFTPQPVRALQGIKIKQMACGDSHCLAVTMG 144

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G V + G N +GQLG G T D   P+ I   E +  V  IAAG  +  AVT +G +Y +G
Sbjct: 145 GEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFEGI-CVKMIAAGAEHTAAVTEDGDLYGWG 203

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            G    LG G+++D   P  +     +G  +V ++ G  H + + SSG
Sbjct: 204 WGRYGNLGLGDRNDRFVPEKVSLV--EGEKMVLIACGWRHTITVSSSG 249



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 97/209 (46%), Gaps = 6/209 (2%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G  HT  ++ +  ++  G    G LG G    + V   +++      +V ++    H
Sbjct: 183 IAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRFVP-EKVSLVEGEKMVLIACGWRH 241

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V  SG ++T G +     GH D    +F P  VEALK     Q++ G   T  LT  
Sbjct: 242 TITVSSSGILYTYGWSKYGQLGHGDFEDHLF-PHKVEALKDSSTSQISGGWRHTMALTSD 300

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
           G ++  G N  GQ+G GD++D  +P  +  P E+   V Q+A G  + LA T    V+++
Sbjct: 301 GKLYGWGWNKFGQVGAGDSVDHCSPVQVMFPAEQ--KVAQVACGWRHTLAYTEKKNVFAW 358

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           G G++  LGHGE  D  +P  I      G
Sbjct: 359 GRGTSGQLGHGEIVDRNKPLMIDAISPDG 387



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 57/179 (31%), Positives = 86/179 (48%), Gaps = 5/179 (2%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           VV VSA  +H+  +L+   + + G       GH D    +  P ++          V  G
Sbjct: 23  VVLVSAGASHSVALLEGNVLCSWGRGEDGQLGHGDAEDRLV-PTVISGFDAPRITSVICG 81

Query: 225 LNFT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            + T  +      V++ G    G+LGHG++ D  TP+ +  L+ +  + Q+A G S+ LA
Sbjct: 82  ADHTTAYSEEEQQVYSWGWGDFGRLGHGNSSDVFTPQPVRALQGI-KIKQMACGDSHCLA 140

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           VT  G V S+G   N  LG G   D L P+ IQ F  +GI V  ++AG EH  A+   G
Sbjct: 141 VTMGGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAF--EGICVKMIAAGAEHTAAVTEDG 197



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 51/107 (47%), Gaps = 4/107 (3%)

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN-GVVYSFGSGS 297
           + G    GQLGHGD  DR  P  I+  +    +  +  G  +  A +     VYS+G G 
Sbjct: 44  SWGRGEDGQLGHGDAEDRLVPTVISGFD-APRITSVICGADHTTAYSEEEQQVYSWGWGD 102

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              LGHG   D   P+ ++    +GI + +++ GD H +A+   G V
Sbjct: 103 FGRLGHGNSSDVFTPQPVRAL--QGIKIKQMACGDSHCLAVTMGGEV 147



 Score = 46.6 bits (109), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 64/162 (39%), Gaps = 15/162 (9%)

Query: 116 ITTGRYHTLLISNSSV-FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV------QV 168
           I  G  HT+ +S+S + ++ G S  G LGHG        F    FP     +      Q+
Sbjct: 235 IACGWRHTITVSSSGILYTYGWSKYGQLGHG-------DFEDHLFPHKVEALKDSSTSQI 287

Query: 169 SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
           S    H   +   G+++  G N     G  D+      P  V         QV  G   T
Sbjct: 288 SGGWRHTMALTSDGKLYGWGWNKFGQVGAGDSVDHC-SPVQVMFPAEQKVAQVACGWRHT 346

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 270
              T + +V   G  T GQLGHG+ +DR  P  I  +   GS
Sbjct: 347 LAYTEKKNVFAWGRGTSGQLGHGEIVDRNKPLMIDAISPDGS 388


>gi|296220559|ref|XP_002756357.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Callithrix jacchus]
          Length = 979

 Score = 89.0 bits (219), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 120/252 (47%), Gaps = 10/252 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYV 344
           H  A + SSG +
Sbjct: 305 HTSAFVPSSGRI 316



 Score = 81.3 bits (199), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIVQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342



 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 107/226 (47%), Gaps = 7/226 (3%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGV 263



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 95/213 (44%), Gaps = 9/213 (4%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           P+ I++    GI  ++V+AG  H   L  SG +
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAI 211


>gi|157821067|ref|NP_001100990.1| E3 ubiquitin-protein ligase HERC2 [Rattus norvegicus]
 gi|149031474|gb|EDL86454.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 2 (predicted) [Rattus
            norvegicus]
          Length = 4779

 Score = 89.0 bits (219), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 73/228 (32%), Positives = 107/228 (46%), Gaps = 7/228 (3%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3000 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3058

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3059 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3117

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3118 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3176

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG V
Sbjct: 3177 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQV 3222



 Score = 87.8 bits (216), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 118/251 (47%), Gaps = 12/251 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 3975 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4028

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4029 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4087

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4088 HRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4146

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4147 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4204

Query: 334  HVVALDSSGYV 344
            H V     G V
Sbjct: 4205 HCVCCTEDGEV 4215



 Score = 87.4 bits (215), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 67/237 (28%), Positives = 110/237 (46%), Gaps = 17/237 (7%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 169
           + G ++  L +   V+S G    G LGHG       P+     S  +    +  HVV ++
Sbjct: 448 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AGKHVVHIA 503

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G     
Sbjct: 504 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQ 562

Query: 230 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
            L +   G V + G   +G+LG G +    TPK I  L+++  V+++  G  + +A+T +
Sbjct: 563 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVIKVRCGSQFSIALTKD 621

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V
Sbjct: 622 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEV 676



 Score = 80.9 bits (198), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 70/221 (31%), Positives = 110/221 (49%), Gaps = 12/221 (5%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFT 186
             V+SCG +  G LG G  ++  V   R     +++VV+   V +   HA  +   G+VF+
Sbjct: 2956 KVYSCGEATNGRLGLG-MSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3014

Query: 187  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
             G+      GH  +     +PRL+EALK    + +  G + +  LT  G ++T G   +G
Sbjct: 3015 WGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 3073

Query: 247  QLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGH 303
            +LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG 
Sbjct: 3074 RLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGR 3131

Query: 304  GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            G       P+ I+  R  G  V ++  G +  +AL  SG V
Sbjct: 3132 GGSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVV 3170



 Score = 74.7 bits (182), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 57/187 (30%), Positives = 94/187 (50%), Gaps = 20/187 (10%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V+QV+ +E     + ++G+V+T   NS            +  P+LV+ L      ++ A 
Sbjct: 399 VMQVACAEKRFLILSRNGRVYTQAYNSD-----------MLAPQLVQGLASRNIVKIAAH 447

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 448 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 507

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 508 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 565

Query: 338 LDSSGYV 344
           +  +G V
Sbjct: 566 VTENGQV 572



 Score = 74.3 bits (181), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 92/190 (48%), Gaps = 11/190 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V++CG+  N     G      PI  PR + AL     
Sbjct: 2934 SALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPI--PRQITALSSYVV 2991

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L +   +  IA 
Sbjct: 2992 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL-KTKRIRDIAC 3050

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3051 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3108

Query: 335  VVALDSSGYV 344
             +AL   G V
Sbjct: 3109 TLALTDEGLV 3118



 Score = 67.8 bits (164), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3048 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3106

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3107 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3165

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3166 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3224

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3225 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3267



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 78/162 (48%), Gaps = 5/162 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V++CG 
Sbjct: 2904 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGE 2962

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 2963 ATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3022

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG
Sbjct: 3023 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSG 3062



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 82/177 (46%), Gaps = 5/177 (2%)

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA--FV 178
           Y   + +   +++ G    G LGHG    + +            V+ V+     A    V
Sbjct: 508 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAV 566

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
            ++GQV++ GD      G R  +     P+L+E L+ +   +V  G  F+  LT  G V+
Sbjct: 567 TENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVY 625

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
           + G   + +LGHG       PK +  L+    V+ +AAG ++ LA+T +  V+S+GS
Sbjct: 626 SWGKGDNQRLGHGTEEHVRYPKLLEGLQG-KKVIDVAAGSTHCLALTEDSEVHSWGS 681



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4097 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4155

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4156 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4214

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4215 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4260



 Score = 54.3 bits (129), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       V++V      + 
Sbjct: 558 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVIKVRCGSQFSI 616

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 617 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 675

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 676 VHSWGSNDQCQ--HFDTLRVTKPEPTALPGL-DTKHIVGIACGPAQSFA 721



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122  HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 3108 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 3166

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SG V+T G    F  GH  ++  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 3167 SGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3225

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 3226 GDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 3269



 Score = 47.8 bits (112), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 67/137 (48%), Gaps = 3/137 (2%)

Query: 207  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            P   EAL  +   Q+  G      +T  G ++  G    G+LG G T    TP  +  ++
Sbjct: 3921 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQ 3980

Query: 267  EVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
             V    V + +G  + LA++  G VYS+G   +  LGHG +    +PR I++ R  GI V
Sbjct: 3981 HVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLR--GIEV 4038

Query: 326  VRVSAGDEHVVALDSSG 342
            V V+AG  H   + ++G
Sbjct: 4039 VDVAAGGAHSACVTAAG 4055



 Score = 41.2 bits (95), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 7/113 (6%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3897 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 3952

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G V
Sbjct: 3953 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4005


>gi|402873774|ref|XP_003919728.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase HERC2
            [Papio anubis]
          Length = 4123

 Score = 89.0 bits (219), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 73/228 (32%), Positives = 107/228 (46%), Gaps = 7/228 (3%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 2345 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 2403

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 2404 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 2462

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 2463 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 2521

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG V
Sbjct: 2522 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQV 2567



 Score = 87.8 bits (216), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 118/251 (47%), Gaps = 12/251 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 3319 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 3372

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 3373 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 3431

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 3432 HRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 3490

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 3491 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 3548

Query: 334  HVVALDSSGYV 344
            H V     G V
Sbjct: 3549 HCVCCTEDGEV 3559



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/221 (31%), Positives = 110/221 (49%), Gaps = 12/221 (5%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFT 186
             V++CG +  G LG G  ++  V   R     +++VV+   V +   HA  +   G+VF+
Sbjct: 2301 KVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 2359

Query: 187  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
             G+      GH  +     +PRL+EALK    + +  G + +  LT  G ++T G   +G
Sbjct: 2360 WGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 2418

Query: 247  QLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGH 303
            +LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG 
Sbjct: 2419 RLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGR 2476

Query: 304  GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            G       P+ I+  R  G  V ++  G +  +AL  SG V
Sbjct: 2477 GGSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVV 2515



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 91/190 (47%), Gaps = 11/190 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2279 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 2336

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L +   +  IA 
Sbjct: 2337 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL-KTKRIRDIAC 2395

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 2396 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 2453

Query: 335  VVALDSSGYV 344
             +AL   G V
Sbjct: 2454 TLALTDEGLV 2463



 Score = 67.8 bits (164), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 2393 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 2451

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 2452 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 2510

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 2511 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 2569

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 2570 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 2612



 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 77/162 (47%), Gaps = 5/162 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2249 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 2307

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 2308 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 2367

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG
Sbjct: 2368 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSG 2407



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 3441 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 3499

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 3500 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 3558

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 3559 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 3604



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122  HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 2453 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 2511

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SG V+T G    F  GH  ++  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 2512 SGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 2570

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 2571 GDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 2614



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 67/137 (48%), Gaps = 3/137 (2%)

Query: 207  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            P   EAL  +   Q+  G      +T  G ++  G    G+LG G T    TP  +  ++
Sbjct: 3265 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQ 3324

Query: 267  EVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
             V    V + +G  + LA++  G VYS+G   +  LGHG +    +PR I++ R  GI V
Sbjct: 3325 HVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLR--GIEV 3382

Query: 326  VRVSAGDEHVVALDSSG 342
            V V+AG  H   + ++G
Sbjct: 3383 VDVAAGGAHSACVTAAG 3399



 Score = 41.2 bits (95), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 7/113 (6%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3241 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 3296

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G V
Sbjct: 3297 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 3349


>gi|312282233|dbj|BAJ33982.1| unnamed protein product [Thellungiella halophila]
          Length = 440

 Score = 89.0 bits (219), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 116/229 (50%), Gaps = 7/229 (3%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I+ G  H++ L+S   V S G    G LGHG +    +S T+++      +V V+   +H
Sbjct: 20  ISAGASHSVALLSGDIVCSWGRGEDGQLGHG-DAEDRLSPTQLSALDDHQIVSVTCGADH 78

Query: 175 A-AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
             A+     +V++ G       GH +++  +F P  ++AL G+  KQ+  G +    +T+
Sbjct: 79  TVAYSESRMEVYSWGWGDFGRLGHGNSS-DLFTPLPIKALHGIRIKQIACGDSHCLAVTM 137

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V + G N +GQLG GDT D   P+ I   E +  +  +AAG  +  AVT +G +Y +
Sbjct: 138 EGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGI-RIKMVAAGAEHTAAVTEDGDLYGW 196

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           G G    LG G+++D L P  + +    G  +  V+ G  H +++  SG
Sbjct: 197 GWGRYGNLGLGDRNDRLVPERVTSA--GGEKMSMVACGWRHTISVSYSG 243



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 63/184 (34%), Positives = 88/184 (47%), Gaps = 5/184 (2%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 219
           P    V+ +SA  +H+  +L    V + G       GH D    +  P  + AL      
Sbjct: 12  PPPRRVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRL-SPTQLSALDDHQIV 70

Query: 220 QVTAGLNFT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
            VT G + T  +   R  V++ G    G+LGHG++ D  TP  I  L  +  + QIA G 
Sbjct: 71  SVTCGADHTVAYSESRMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGI-RIKQIACGD 129

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           S+ LAVT  G V S+G   N  LG G+  D L P+ IQ F  +GI +  V+AG EH  A+
Sbjct: 130 SHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAF--EGIRIKMVAAGAEHTAAV 187

Query: 339 DSSG 342
              G
Sbjct: 188 TEDG 191



 Score = 74.3 bits (181), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 94/208 (45%), Gaps = 4/208 (1%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HT  ++ +  ++  G    G LG G    + V   R+       +  V+    H
Sbjct: 177 VAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLVP-ERVTSAGGEKMSMVACGWRH 235

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V  SG ++T G +     GH D    +  P  +EAL      Q++ G   T  LT  
Sbjct: 236 TISVSYSGALYTYGWSKYGQLGHGDLEDHLV-PHKLEALGNSVISQISGGWRHTMALTSD 294

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G ++  G N  GQ+G G+ LD+ +P  +  + +   VVQ++ G  + LAVT    V+++G
Sbjct: 295 GKLYGWGWNKFGQVGVGNNLDQCSPVQVR-IPDDQKVVQVSCGWRHTLAVTERNNVFAWG 353

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKG 322
            G+N  LG GE  D   P+ I+     G
Sbjct: 354 RGTNGQLGIGESLDRNFPKIIEALSVDG 381



 Score = 51.6 bits (122), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 52/172 (30%), Positives = 82/172 (47%), Gaps = 12/172 (6%)

Query: 109 TSAGNMQITT---GRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH 164
           TSAG  +++    G  HT+ +S S ++++ G S  G LGHG      V   ++     + 
Sbjct: 219 TSAGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLVPH-KLEALGNSV 277

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCG---HRDTNRPIFRPRLVEALKGVPCKQV 221
           + Q+S    H   +   G+++  G N     G   + D   P+ + R+ +  K V   QV
Sbjct: 278 ISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPV-QVRIPDDQKVV---QV 333

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           + G   T  +T R +V   G  T+GQLG G++LDR  PK I  L   G+  Q
Sbjct: 334 SCGWRHTLAVTERNNVFAWGRGTNGQLGIGESLDRNFPKIIEALSVDGASGQ 385


>gi|355694483|gb|AER99684.1| hect domain and RLD 2 [Mustela putorius furo]
          Length = 1082

 Score = 89.0 bits (219), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 118/251 (47%), Gaps = 12/251 (4%)

Query: 96  FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
            L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 279 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 332

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
            I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 333 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 391

Query: 216 VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                V   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 392 HRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 450

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 451 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 508

Query: 334 HVVALDSSGYV 344
           H V     G V
Sbjct: 509 HCVCCTEDGEV 519



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118 TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 401 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 459

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 460 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 518

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 519 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 564



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 67/137 (48%), Gaps = 3/137 (2%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P   EAL  +   Q+  G      +T  G ++  G    G+LG G T    TP  +  ++
Sbjct: 225 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQ 284

Query: 267 EVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
            V    V + +G  + LA++  G VYS+G   +  LGHG +    +PR I++ R  GI V
Sbjct: 285 HVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLR--GIEV 342

Query: 326 VRVSAGDEHVVALDSSG 342
           V V+AG  H   + ++G
Sbjct: 343 VDVAAGGAHSACVTAAG 359



 Score = 40.8 bits (94), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 7/113 (6%)

Query: 235 GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 201 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 256

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           + G G+   LG G       P  +++ +   I  V V++G +H +AL S G V
Sbjct: 257 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 309


>gi|327268092|ref|XP_003218832.1| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Anolis
           carolinensis]
          Length = 4839

 Score = 89.0 bits (219), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 70/238 (29%), Positives = 114/238 (47%), Gaps = 19/238 (7%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 169
           + G ++  L +   VFS G    G LGHG       P+    +S  +    +  HVV ++
Sbjct: 503 SDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQ----AGKHVVHIA 558

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V+ G     
Sbjct: 559 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTI-PMLVTGLKGLKVIDVSCGSGDAQ 617

Query: 230 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
            L +   G V + G   +G+LG G +    TPK I  L+++  +V+++ G  + +A+T +
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DIVKVSCGSQFSVALTKD 676

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--DSSGY 343
           G VYS+G G N  LGHG +     P+ ++    +G  V+ V AG  H +AL  DS  Y
Sbjct: 677 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGEKVIDVVAGSTHCLALTEDSEVY 732



 Score = 88.2 bits (217), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 118/251 (47%), Gaps = 12/251 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4035 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4088

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV ++A   H+A +  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4089 VIESLRGIEVVDIAAGGAHSACITAAGDLYTWGKGRYGRLGHGDSEDQL-KPKLVEALQG 4147

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  VG VV+
Sbjct: 4148 YRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGVG-VVK 4206

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4207 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4264

Query: 334  HVVALDSSGYV 344
            H V     G V
Sbjct: 4265 HCVCCTEDGEV 4275



 Score = 84.7 bits (208), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 69/228 (30%), Positives = 106/228 (46%), Gaps = 7/228 (3%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+   L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3060 GRHAMALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAI 3118

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG++++ G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3119 TSSGELYSWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3177

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3178 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3236

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              F LGHG      +P+ ++  R  G  ++ V+ G  H +A+  +G V
Sbjct: 3237 DYFRLGHGTDVHVRKPQVVEGLR--GKKIIHVAVGALHCLAVTDTGQV 3282



 Score = 75.1 bits (183), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 58/187 (31%), Positives = 94/187 (50%), Gaps = 20/187 (10%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++ +E     + ++G+V+T   NS            I  P+LV++L      ++ A 
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNSD-----------ILGPQLVQSLASRNIVKIAAH 502

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V + G    G+LGHGDT+    PK I+ L  ++ G  VV IA G +
Sbjct: 503 SDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVHIACGST 562

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   D+  P  +     KG+ V+ VS  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGL--KGLKVIDVSCGSGDAQTLA 620

Query: 338 LDSSGYV 344
           +  +G V
Sbjct: 621 VTENGQV 627



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 60/190 (31%), Positives = 91/190 (47%), Gaps = 11/190 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2994 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPI--PRQITALSNYVV 3051

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3052 KKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3110

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +YS+G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3111 GSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3168

Query: 335  VVALDSSGYV 344
             +AL   G V
Sbjct: 3169 TLALTDEGLV 3178



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  I++S  ++S G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3108 IACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3166

Query: 175  AAFV--LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A  +     G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3167 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3225

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     ++ +A G  + LAVT  G VY+
Sbjct: 3226 KSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRG-KKIIHVAVGALHCLAVTDTGQVYA 3284

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H V+
Sbjct: 3285 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVS 3327



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/162 (30%), Positives = 78/162 (48%), Gaps = 5/162 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2964 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3022

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  + +A+T +G V+S+G G +  
Sbjct: 3023 ATNGRLGLGLSSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGK 3082

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            LGH  + +  +PR I+  + K I    ++ G  H  A+ SSG
Sbjct: 3083 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAAITSSG 3122



 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/177 (27%), Positives = 83/177 (46%), Gaps = 5/177 (2%)

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS--ASENHAAFV 178
           Y   + +   +++ G    G LGHG    Q +            V+ VS  + +     V
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGL-KGLKVIDVSCGSGDAQTLAV 621

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
            ++GQV++ GD      G R  +     P+L+E L+ +   +V+ G  F+  LT  G V+
Sbjct: 622 TENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLDIVKVSCGSQFSVALTKDGQVY 680

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
           + G   + +LGHG       PK +  L+    V+ + AG ++ LA+T +  VYS+GS
Sbjct: 681 SWGKGDNQRLGHGTEEHVRYPKLLEGLQG-EKVIDVVAGSTHCLALTEDSEVYSWGS 736



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4157 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGVGVVKVECGSQFSV 4215

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4216 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4274

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    + ++A G ++ LA
Sbjct: 4275 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKINRVACGSAHTLA 4320



 Score = 54.3 bits (129), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 77/169 (45%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       +V+VS     + 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDIVKVSCGSQFSV 671

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGEKVIDVVAGSTHCLALTEDSE 730

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           V++ GSN   Q  H DTL   +P P ++  L+    +V IA GP+   A
Sbjct: 731 VYSWGSNDQCQ--HFDTLRITKPDPTALPGLDS-KHIVGIACGPAQSFA 776



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122  HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 3168 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 3226

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SG V+T G    F  GH  T+  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 3227 SGVVWTWGKGDYFRLGH-GTDVHVRKPQVVEGLRGKKIIHVAVGALHCLAVTDTGQVYAW 3285

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G N HGQ G+G T     P  +  LE    + ++A G S+ ++ T
Sbjct: 3286 GDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVSWT 3329



 Score = 47.8 bits (112), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 67/137 (48%), Gaps = 3/137 (2%)

Query: 207  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            P   EAL  +   Q+  G      +T  G ++  G    G+LG G T    TP  +  ++
Sbjct: 3981 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQ 4040

Query: 267  EVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
             V    V + +G  + LA++  G VYS+G   +  LGHG +    +PR I++ R  GI V
Sbjct: 4041 HVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLR--GIEV 4098

Query: 326  VRVSAGDEHVVALDSSG 342
            V ++AG  H   + ++G
Sbjct: 4099 VDIAAGGAHSACITAAG 4115



 Score = 41.2 bits (95), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 7/113 (6%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3957 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4012

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G V
Sbjct: 4013 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4065


>gi|410048912|ref|XP_003952667.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Pan troglodytes]
          Length = 4776

 Score = 89.0 bits (219), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 73/228 (32%), Positives = 107/228 (46%), Gaps = 7/228 (3%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3049 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 3107

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3108 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3166

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3167 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3225

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG V
Sbjct: 3226 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQV 3271



 Score = 87.8 bits (216), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 110/237 (46%), Gaps = 17/237 (7%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 169
           + G ++  L +   V+S G    G LGHG       P+     S  +    +  HVV ++
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AGKHVVHIA 557

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G     
Sbjct: 558 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQ 616

Query: 230 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
            L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +
Sbjct: 617 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSIALTKD 675

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V
Sbjct: 676 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEV 730



 Score = 87.8 bits (216), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 118/251 (47%), Gaps = 12/251 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 3972 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4025

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4026 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4084

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4085 HRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4143

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4144 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4201

Query: 334  HVVALDSSGYV 344
            H V     G V
Sbjct: 4202 HCVCCTEDGEV 4212



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/221 (31%), Positives = 110/221 (49%), Gaps = 12/221 (5%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFT 186
             V++CG +  G LG G  ++  V   R     +++VV+   V +   HA  +   G+VF+
Sbjct: 3005 KVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3063

Query: 187  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
             G+      GH  +     +PRL+EALK    + +  G + +  LT  G ++T G   +G
Sbjct: 3064 WGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 3122

Query: 247  QLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGH 303
            +LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG 
Sbjct: 3123 RLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGR 3180

Query: 304  GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            G       P+ I+  R  G  V ++  G +  +AL  SG V
Sbjct: 3181 GGSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVV 3219



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/187 (31%), Positives = 94/187 (50%), Gaps = 20/187 (10%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 501

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 561

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 562 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 619

Query: 338 LDSSGYV 344
           +  +G V
Sbjct: 620 VTENGQV 626



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 91/190 (47%), Gaps = 11/190 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2983 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3040

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L +   +  IA 
Sbjct: 3041 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL-KTKRIRDIAC 3099

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3100 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3157

Query: 335  VVALDSSGYV 344
             +AL   G V
Sbjct: 3158 TLALTDEGLV 3167



 Score = 67.8 bits (164), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3097 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3155

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3156 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3214

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3215 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3273

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3274 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3316



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 77/162 (47%), Gaps = 5/162 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2953 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3011

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3012 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3071

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG
Sbjct: 3072 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSG 3111



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 82/177 (46%), Gaps = 5/177 (2%)

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA--FV 178
           Y   + +   +++ G    G LGHG    + +            V+ V+     A    V
Sbjct: 562 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAV 620

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
            ++GQV++ GD      G R  +     P+L+E L+ +   +V  G  F+  LT  G V+
Sbjct: 621 TENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 679

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
           + G   + +LGHG       PK +  L+    V+ +AAG ++ LA+T +  V+S+GS
Sbjct: 680 SWGKGDNQRLGHGTEEHVRYPKLLEGLQG-KKVIDVAAGSTHCLALTEDSEVHSWGS 735



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4094 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4152

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4153 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4211

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4212 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4257



 Score = 55.1 bits (131), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 730 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 775



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122  HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 3157 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 3215

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SG V+T G    F  GH  ++  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 3216 SGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3274

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 3275 GDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 3318


>gi|344237346|gb|EGV93449.1| putative E3 ubiquitin-protein ligase HERC3 [Cricetulus griseus]
          Length = 461

 Score = 89.0 bits (219), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 62/181 (34%), Positives = 91/181 (50%), Gaps = 4/181 (2%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           ++QVS    H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG
Sbjct: 21  ILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAG 80

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
              +  L++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +
Sbjct: 81  GAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVL 139

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGY 343
           T +G V++FG+GS   LGHG  +DE+ PR +      G  V +++ G +H +A + SSG 
Sbjct: 140 TKSGGVFTFGAGSCGQLGHGSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGL 197

Query: 344 V 344
           +
Sbjct: 198 I 198



 Score = 74.7 bits (182), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 65/194 (33%), Positives = 96/194 (49%), Gaps = 6/194 (3%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++ G +H L L ++   F+ G +  G LG G E     S  R+       + QV+A  
Sbjct: 22  LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGG 81

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG VF  G N++   G  D  +    P  V+ L+      ++ G   T  LT
Sbjct: 82  AHSFALSLSGAVFGWGMNNAGQLGLSD-EKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 140

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGNGVV 290
             G V T G+ + GQLGHG   D   P+ +  LE +GS V QIA G  + LA V  +G++
Sbjct: 141 KSGGVFTFGAGSCGQLGHGSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLI 198

Query: 291 YSFGSGSNFCLGHG 304
           Y+FG G+   LG G
Sbjct: 199 YAFGCGARGQLGTG 212



 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 46/146 (31%), Positives = 71/146 (48%), Gaps = 4/146 (2%)

Query: 200 TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT- 258
           T   +  PRL++ L      QV+ G      L   G   T G N+HGQLG G      T 
Sbjct: 3   TEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTS 62

Query: 259 PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 318
           P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +   LG  ++ D   P  ++  
Sbjct: 63  PQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLL 121

Query: 319 RRKGIHVVRVSAGDEHVVALDSSGYV 344
           R +   VV +S G+EH   L  SG V
Sbjct: 122 RTQ--KVVYISCGEEHTAVLTKSGGV 145


>gi|441617074|ref|XP_004088418.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Nomascus leucogenys]
          Length = 4530

 Score = 89.0 bits (219), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 73/228 (32%), Positives = 107/228 (46%), Gaps = 7/228 (3%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 2752 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 2810

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 2811 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 2869

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 2870 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 2928

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG V
Sbjct: 2929 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQV 2974



 Score = 87.8 bits (216), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 118/251 (47%), Gaps = 12/251 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 3726 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 3779

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 3780 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 3838

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 3839 HRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 3897

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 3898 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 3955

Query: 334  HVVALDSSGYV 344
            H V     G V
Sbjct: 3956 HCVCCTEDGEV 3966



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 69/221 (31%), Positives = 110/221 (49%), Gaps = 12/221 (5%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFT 186
             V++CG +  G LG G  ++  V   R     +++VV+   V +   HA  +   G+VF+
Sbjct: 2708 KVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 2766

Query: 187  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
             G+      GH  +     +PRL+EALK    + +  G + +  LT  G ++T G   +G
Sbjct: 2767 WGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 2825

Query: 247  QLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGH 303
            +LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG 
Sbjct: 2826 RLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGR 2883

Query: 304  GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            G       P+ I+  R  G  V ++  G +  +AL  SG V
Sbjct: 2884 GGSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVV 2922



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 91/190 (47%), Gaps = 11/190 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2686 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 2743

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L +   +  IA 
Sbjct: 2744 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL-KTKRIRDIAC 2802

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 2803 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 2860

Query: 335  VVALDSSGYV 344
             +AL   G V
Sbjct: 2861 TLALTDEGLV 2870



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/181 (30%), Positives = 91/181 (50%), Gaps = 20/181 (11%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 408 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 456

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 457 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 516

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 517 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 574

Query: 338 L 338
           +
Sbjct: 575 V 575



 Score = 67.8 bits (164), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 2800 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 2858

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 2859 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 2917

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 2918 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 2976

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 2977 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3019



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 77/162 (47%), Gaps = 5/162 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2656 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 2714

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 2715 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 2774

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG
Sbjct: 2775 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSG 2814



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 3848 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 3906

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 3907 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 3965

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 3966 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4011



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122  HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 2860 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 2918

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SG V+T G    F  GH  ++  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 2919 SGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 2977

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 2978 GDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 3021



 Score = 47.8 bits (112), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 67/137 (48%), Gaps = 3/137 (2%)

Query: 207  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            P   EAL  +   Q+  G      +T  G ++  G    G+LG G T    TP  +  ++
Sbjct: 3672 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQ 3731

Query: 267  EVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
             V    V + +G  + LA++  G VYS+G   +  LGHG +    +PR I++ R  GI V
Sbjct: 3732 HVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLR--GIEV 3789

Query: 326  VRVSAGDEHVVALDSSG 342
            V V+AG  H   + ++G
Sbjct: 3790 VDVAAGGAHSACVTAAG 3806



 Score = 42.7 bits (99), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 4/77 (5%)

Query: 270 SVVQIAAGPS--YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF--RRKGIHV 325
           ++V+IAA     + LA+   G VYS+G G    LGHG+     +P+ I  F  ++ G HV
Sbjct: 449 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 508

Query: 326 VRVSAGDEHVVALDSSG 342
           V ++ G  +  A+ + G
Sbjct: 509 VHIACGSTYSAAITAEG 525



 Score = 40.8 bits (94), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 7/113 (6%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3648 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 3703

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G V
Sbjct: 3704 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 3756


>gi|296220557|ref|XP_002756356.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Callithrix jacchus]
          Length = 1057

 Score = 89.0 bits (219), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 120/252 (47%), Gaps = 10/252 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYV 344
           H  A + SSG +
Sbjct: 305 HTSAFVPSSGRI 316



 Score = 80.9 bits (198), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIVQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342



 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 107/226 (47%), Gaps = 7/226 (3%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGV 263



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 95/213 (44%), Gaps = 9/213 (4%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           P+ I++    GI  ++V+AG  H   L  SG +
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAI 211


>gi|390472682|ref|XP_003734522.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Callithrix
           jacchus]
          Length = 1049

 Score = 89.0 bits (219), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 120/252 (47%), Gaps = 10/252 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYV 344
           H  A + SSG +
Sbjct: 305 HTSAFVPSSGRI 316



 Score = 80.9 bits (198), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIVQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342



 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 107/226 (47%), Gaps = 7/226 (3%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGV 263



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 95/213 (44%), Gaps = 9/213 (4%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           P+ I++    GI  ++V+AG  H   L  SG +
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAI 211


>gi|426220634|ref|XP_004004519.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Ovis aries]
          Length = 4836

 Score = 89.0 bits (219), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 118/251 (47%), Gaps = 12/251 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4032 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4085

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4086 VIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4144

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 V   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4145 HRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4203

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4204 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4261

Query: 334  HVVALDSSGYV 344
            H V     G V
Sbjct: 4262 HCVCCSEDGEV 4272



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 72/228 (31%), Positives = 107/228 (46%), Gaps = 7/228 (3%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3057 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3115

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3116 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3174

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3175 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3233

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G V
Sbjct: 3234 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDAGQV 3279



 Score = 87.8 bits (216), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 110/237 (46%), Gaps = 17/237 (7%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 169
           + G ++  L +   V+S G    G LGHG       P+     S  +    +  HVV ++
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AGKHVVHIA 558

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G     
Sbjct: 559 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQ 617

Query: 230 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
            L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSIALTKD 676

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V
Sbjct: 677 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEV 731



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/221 (31%), Positives = 110/221 (49%), Gaps = 12/221 (5%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFT 186
             V++CG +  G LG G  ++  V   R     +++VV+   V +   HA  +   G+VF+
Sbjct: 3013 KVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3071

Query: 187  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
             G+      GH  +     +PRL+EALK    + +  G + +  LT  G ++T G   +G
Sbjct: 3072 WGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 3130

Query: 247  QLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGH 303
            +LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG 
Sbjct: 3131 RLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGR 3188

Query: 304  GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            G       P+ I+  R  G  V ++  G +  +AL  SG V
Sbjct: 3189 GGSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVV 3227



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/187 (31%), Positives = 94/187 (50%), Gaps = 20/187 (10%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 502

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 620

Query: 338 LDSSGYV 344
           +  +G V
Sbjct: 621 VTENGQV 627



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 91/190 (47%), Gaps = 11/190 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2991 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3048

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L +   +  IA 
Sbjct: 3049 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL-KTKRIRDIAC 3107

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3108 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3165

Query: 335  VVALDSSGYV 344
             +AL   G V
Sbjct: 3166 TLALTDEGLV 3175



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 99/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3105 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3163

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3164 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3222

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 3223 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDAGQVYA 3281

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3282 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3324



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 77/162 (47%), Gaps = 5/162 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3019

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3020 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3079

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG
Sbjct: 3080 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSG 3119



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/228 (25%), Positives = 99/228 (43%), Gaps = 7/228 (3%)

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA--FV 178
           Y   + +   +++ G    G LGHG    + +            V+ V+     A    V
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAV 621

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
            ++GQV++ GD      G R  +     P+L+E L+ +   +V  G  F+  LT  G V+
Sbjct: 622 TENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 680

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           + G   + +LGHG       PK +  L+    V+ +AAG ++ LA+T +  V+S+GS   
Sbjct: 681 SWGKGDNQRLGHGTEEHVRYPKLLEGLQG-KKVIDVAAGSTHCLALTEDSEVHSWGSNDQ 739

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSL 346
                  +  + +P A+     K  H+V ++ G     A  S    S+
Sbjct: 740 CQHFDTLRVTKPEPSALPGLDTK--HIVGIACGPAQSFAWSSCSEWSI 785



 Score = 55.1 bits (131), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 671

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 731 VHSWGSNDQCQ--HFDTLRVTKPEPSALPGL-DTKHIVGIACGPAQSFA 776



 Score = 54.7 bits (130), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4154 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4212

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       +  G 
Sbjct: 4213 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGE 4271

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4272 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4317



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122  HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 3165 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 3223

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SG V+T G    F  GH  ++  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 3224 SGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAW 3282

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 3283 GDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 3326



 Score = 46.6 bits (109), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 66/137 (48%), Gaps = 3/137 (2%)

Query: 207  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            P   EAL  +   Q+  G      +T  G ++  G    G+LG G T    TP  +  ++
Sbjct: 3978 PTPCEALAALRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGVGGTESVSTPTLLESIQ 4037

Query: 267  EVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
             V    V + +G  + LA++  G VYS+G   +  LGHG +    +PR I++ R  G  V
Sbjct: 4038 HVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLR--GTEV 4095

Query: 326  VRVSAGDEHVVALDSSG 342
            V V+AG  H   + ++G
Sbjct: 4096 VDVAAGGAHSACVTAAG 4112



 Score = 41.2 bits (95), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 7/113 (6%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3954 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPV----QLIGGEQTLFAVTADGKLY 4009

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G V
Sbjct: 4010 ATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4062


>gi|432118039|gb|ELK37976.1| E3 ubiquitin-protein ligase HERC2 [Myotis davidii]
          Length = 4285

 Score = 89.0 bits (219), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 80/304 (26%), Positives = 139/304 (45%), Gaps = 24/304 (7%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P + + L +L  +Q+      +  +SRN ++    +   +     + +Q +  S +IV+ 
Sbjct: 443 PIQSKGLANLGVTQIACAEKRFLILSRNGRV--YTQAYNSDTLAPQLVQGLA-SRNIVKI 499

Query: 110 SAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSA 162
           +A     + G ++  L +   V+S G    G LGHG       P+     S  +    + 
Sbjct: 500 AAH----SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AG 551

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG+    V 
Sbjct: 552 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVA 610

Query: 223 AGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
            G      L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  +
Sbjct: 611 CGSGDAQPLAVTDNGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQF 669

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL  
Sbjct: 670 SVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEAL--QGKKVIDVAAGSTHCLALTE 727

Query: 341 SGYV 344
              V
Sbjct: 728 DSEV 731



 Score = 87.8 bits (216), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 72/228 (31%), Positives = 107/228 (46%), Gaps = 7/228 (3%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 2760 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 2818

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 2819 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 2877

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 2878 VFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 2936

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G V
Sbjct: 2937 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDAGQV 2982



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/220 (31%), Positives = 110/220 (50%), Gaps = 12/220 (5%)

Query: 131  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFTC 187
            V++CG +  G LG G  ++  V   R     +++VV+   V +   HA  +   G+VF+ 
Sbjct: 2717 VYACGEATNGRLGLG-MSSGTVPIPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSW 2775

Query: 188  GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
            G+      GH  +     +PRL+EALK    + +  G + +  LT  G ++T G   +G+
Sbjct: 2776 GEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 2834

Query: 248  LGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGHG 304
            LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG G
Sbjct: 2835 LGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 2892

Query: 305  EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
                   P+ I+  R  G  V ++  G +  +AL  SG V
Sbjct: 2893 GSEGCNVPQNIE--RLNGQGVCQIECGAQFSLALTKSGVV 2930



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 63/202 (31%), Positives = 94/202 (46%), Gaps = 17/202 (8%)

Query: 155  TRINFPS------AAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFR 206
            T I  PS      A +VVQV+        V   G+V+ CG+  N     G      PI  
Sbjct: 2682 TEIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGMSSGTVPI-- 2739

Query: 207  PRLVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            PR V AL     K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  
Sbjct: 2740 PRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEA 2799

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L +   +  IA G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  
Sbjct: 2800 L-KTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHR 2856

Query: 325  VVRVSAG--DEHVVALDSSGYV 344
            V++V+ G  D   +AL   G V
Sbjct: 2857 VIQVACGSRDAQTLALTDEGLV 2878



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 74/141 (52%), Gaps = 4/141 (2%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR+VE+L+G     + AG 
Sbjct: 3721 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVVESLRGTEVVDIAAGG 3779

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV +A  +G +  L 
Sbjct: 3780 AHSACVTSAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDVACGSGDAQTLC 3838

Query: 284  VTGNGVVYSFGSGSNFCLGHG 304
            +T +  V+S+G G    LG G
Sbjct: 3839 LTDDDTVWSWGDGDYGKLGRG 3859



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 99/226 (43%), Gaps = 8/226 (3%)

Query: 115  QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
             I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+    
Sbjct: 2807 DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSR 2865

Query: 174  HAA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  L
Sbjct: 2866 DAQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNVPQNIERLNGQGVCQIECGAQFSLAL 2924

Query: 232  TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            T  G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY
Sbjct: 2925 TKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDAGQVY 2983

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            ++G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 2984 AWGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3027



 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 74/279 (26%), Positives = 111/279 (39%), Gaps = 50/279 (17%)

Query: 113  NMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS 171
             + + +G  H L L S   V+S G +  G LGHG   + C     +       VV ++A 
Sbjct: 3720 KVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVVESLRGTEVVDIAAG 3778

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTG 229
              H+A V  +G ++T G       GH D+   + +P+LVEAL+G     V   +G   T 
Sbjct: 3779 GAHSACVTSAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVVDVACGSGDAQTL 3837

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDT--------------LDRP-TPKSIAPLEEVG----- 269
             LT    V + G   +G+LG G +              + RP TP    P  +VG     
Sbjct: 3838 CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKVPLSLRVGRPSTPPPSWPRLDVGGKGDY 3897

Query: 270  -----------------------SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
                                    V+ IA G  + +  T  G VY++G      LG G  
Sbjct: 3898 HRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEEGEVYTWGDNDEGQLGDGTT 3957

Query: 307  HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVS 345
            +   +PR +     +G  V RV+ G  H +A  +S   S
Sbjct: 3958 NAIQRPRLVAAL--QGRKVNRVACGSAHTLAWSTSKPAS 3994



 Score = 58.5 bits (140), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 81/177 (45%), Gaps = 5/177 (2%)

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA--FV 178
           Y   + +   +++ G    G LGHG    + +            V+ V+     A    V
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQPLAV 621

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
             +GQV++ GD      G R  +     P+L+E L+ +   +V  G  F+  LT  G V+
Sbjct: 622 TDNGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVY 680

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
           + G   + +LGHG       PK +  L+    V+ +AAG ++ LA+T +  V+S+G+
Sbjct: 681 SWGKGDNQRLGHGTEEHVRYPKLLEALQG-KKVIDVAAGSTHCLALTEDSEVHSWGN 736



 Score = 57.8 bits (138), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 69/140 (49%), Gaps = 3/140 (2%)

Query: 207  PRLVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  ++V   +G      L+  G V++ G    G+LGHG+      P+ +  
Sbjct: 3707 PTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVVES 3766

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L     VV IAAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 3767 LRGT-EVVDIAAGGAHSACVTSAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 3825

Query: 325  VVRVSAGDEHVVALDSSGYV 344
             V   +GD   + L     V
Sbjct: 3826 DVACGSGDAQTLCLTDDDTV 3845



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 49/160 (30%), Positives = 72/160 (45%), Gaps = 5/160 (3%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           +  N  V+S G    G LG G  +  C +   I       VV+V      +  + + GQV
Sbjct: 621 VTDNGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQV 679

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
           ++ G   +   GH  T   +  P+L+EAL+G     V AG      LT    VH+ G+N 
Sbjct: 680 YSWGKGDNQRLGH-GTEEHVRYPKLLEALQGKKVIDVAAGSTHCLALTEDSEVHSWGNND 738

Query: 245 HGQLGHGDTLDRPTPK-SIAPLEEVGSVVQIAAGPSYMLA 283
             Q  H DTL +  P+ S+ P  +   +V IA GP+   A
Sbjct: 739 QCQ--HFDTLHQTKPEPSLLPGLDTKHIVGIACGPAQSFA 776



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122  HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 2868 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNVPQNIERLNGQGVCQIECGAQFSLALTK 2926

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SG V+T G    F  GH  ++  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 2927 SGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAW 2985

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 2986 GDNDHGQQGNGTTTVNRKPTLVQGLEGQ-KITRVACGSSHSVAWT 3029



 Score = 40.4 bits (93), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 7/113 (6%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3631 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 3686

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G V
Sbjct: 3687 ATGYGAGGRLGVGGTESVSAPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEV 3739


>gi|295696487|ref|YP_003589725.1| S-layer protein [Kyrpidia tusciae DSM 2912]
 gi|295412089|gb|ADG06581.1| S-layer domain protein [Kyrpidia tusciae DSM 2912]
          Length = 1423

 Score = 89.0 bits (219), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 78/237 (32%), Positives = 112/237 (47%), Gaps = 13/237 (5%)

Query: 112 GNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
           G   ++ G  H+L L S+ +V++ G +  G LG G  T +         PS   V QVSA
Sbjct: 71  GEAAVSAGGSHSLVLTSDQTVWAWGDNTNGQLGDGTTTGRQTPTPAQGLPS---VAQVSA 127

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
            E+H+  +   G+VF  G NSS   G     D+  P+    L         K V AG N 
Sbjct: 128 GESHSLALTDDGRVFAWGLNSSGQLGDGTTADSRTPVQVQGLATDST---IKVVAAGGNH 184

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           +  LT  G V   G N+ GQLG+  T+D   P  +  L    +V  +AAG ++ LA+T +
Sbjct: 185 SLALTSDGRVFAWGKNSSGQLGNNSTVDSSIPVQVQGLPA--NVTAVAAGGNHSLALTSD 242

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G +Y++G  S+  LG G   +   P  +      G   V VSAG +H +AL   G V
Sbjct: 243 GRIYAWGLNSSGQLGDGTTSNSSTPVLVAGL-PAGSKPVAVSAGKDHSLALMQDGTV 298



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 72/236 (30%), Positives = 109/236 (46%), Gaps = 17/236 (7%)

Query: 115 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q++ G  H+L L  +  VF+ G +  G LG G               + + +  V+A  N
Sbjct: 124 QVSAGESHSLALTDDGRVFAWGLNSSGQLGDGTTADSRTPVQVQGLATDSTIKVVAAGGN 183

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHR---DTNRPIFRPRLVEALKGVPCK--QVTAGLNFT 228
           H+  +   G+VF  G NSS   G+    D++ P+        ++G+P     V AG N +
Sbjct: 184 HSLALTSDGRVFAWGKNSSGQLGNNSTVDSSIPV-------QVQGLPANVTAVAAGGNHS 236

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
             LT  G ++  G N+ GQLG G T +  TP  +A L      V ++AG  + LA+  +G
Sbjct: 237 LALTSDGRIYAWGLNSSGQLGDGTTSNSSTPVLVAGLPAGSKPVAVSAGKDHSLALMQDG 296

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            VY++G  S   LG+G       P  +        +V  VSAG    +AL S GYV
Sbjct: 297 TVYAWGGNSYGQLGNGTTTASEMPVQVTGLA----NVTAVSAGGSDSLALTSDGYV 348



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 65/192 (33%), Positives = 98/192 (51%), Gaps = 15/192 (7%)

Query: 159 FPSAAHVV---QVSASENHAAFVLQSGQ-VFTCGDNSSFCCGH-RDTNRPIFRPRLVEAL 213
           +P++A V+    VSA  +H+  VL S Q V+  GDN++   G    T R    P      
Sbjct: 63  YPASAAVLGEAAVSAGGSHS-LVLTSDQTVWAWGDNTNGQLGDGTTTGRQTPTPA----- 116

Query: 214 KGVP-CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
           +G+P   QV+AG + +  LT  G V   G N+ GQLG G T D  TP  +  L    ++ 
Sbjct: 117 QGLPSVAQVSAGESHSLALTDDGRVFAWGLNSSGQLGDGTTADSRTPVQVQGLATDSTIK 176

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
            +AAG ++ LA+T +G V+++G  S+  LG+    D   P  +Q       +V  V+AG 
Sbjct: 177 VVAAGGNHSLALTSDGRVFAWGKNSSGQLGNNSTVDSSIPVQVQGLPA---NVTAVAAGG 233

Query: 333 EHVVALDSSGYV 344
            H +AL S G +
Sbjct: 234 NHSLALTSDGRI 245



 Score = 72.0 bits (175), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 71/234 (30%), Positives = 111/234 (47%), Gaps = 11/234 (4%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  H+L L S+  VF+ G +  G LG+       +       P  A+V  V+A  NH
Sbjct: 178 VAAGGNHSLALTSDGRVFAWGKNSSGQLGNNSTVDSSIPVQVQGLP--ANVTAVAAGGNH 235

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK-GVPCKQVTAGLNFTGFLTI 233
           +  +   G+++  G NSS   G   T+     P LV  L  G     V+AG + +  L  
Sbjct: 236 SLALTSDGRIYAWGLNSSGQLGDGTTSNS-STPVLVAGLPAGSKPVAVSAGKDHSLALMQ 294

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V+  G N++GQLG+G T     P  +  L  V +V   +AG S  LA+T +G VY++
Sbjct: 295 DGTVYAWGGNSYGQLGNGTTTASEMPVQVTGLANVTAV---SAGGSDSLALTSDGYVYAW 351

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKG--IHVVRVSAGDEHVVALDSSGYVS 345
           G  S+  LG G   +   P  + +    G  +  +++S G  + +AL S G+ S
Sbjct: 352 GLNSSGQLGDGTTSNRNTPVRVFSVLSTGALLTDLQLSDGSSNPIAL-SPGFTS 404


>gi|301755556|ref|XP_002913645.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC5-like
           [Ailuropoda melanoleuca]
          Length = 1035

 Score = 89.0 bits (219), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 72/221 (32%), Positives = 108/221 (48%), Gaps = 5/221 (2%)

Query: 99  SVEHSS-DIVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR 156
           S+EH+    +      +QI  G YH+L +S    +F+ G +L G LG G       +   
Sbjct: 136 SIEHARFQCILQEKSIIQIACGDYHSLALSKGGELFAWGQNLHGQLGVGRLFASIPTPQA 195

Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
           +   S   +VQ+SA + H+  +  SG V++ G N     G   T+   F P L+E L   
Sbjct: 196 VEHLSGVPLVQISAGKAHSMALSMSGNVYSWGRNDLGQLGLGHTDGEDF-PSLIETLDNQ 254

Query: 217 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
             + +  G + T  LT  G V T G+  +GQLGH  T +   P+ +  L     V QIA 
Sbjct: 255 QVEFLACGGSHTALLTTDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAG-NRVTQIAC 313

Query: 277 GPSYMLA-VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
           G  + LA V+  G V+SFGSG    LG+G  H++L P  ++
Sbjct: 314 GRRHTLAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMK 354



 Score = 80.9 bits (198), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 54/173 (31%), Positives = 89/173 (51%), Gaps = 3/173 (1%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           ++Q++  + H+  + + G++F  G N     G       I  P+ VE L GVP  Q++AG
Sbjct: 151 IIQIACGDYHSLALSKGGELFAWGQNLHGQLGVGRLFASIPTPQAVEHLSGVPLVQISAG 210

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
              +  L++ G+V++ G N  GQLG G T     P  I  L+    V  +A G S+   +
Sbjct: 211 KAHSMALSMSGNVYSWGRNDLGQLGLGHTDGEDFPSLIETLDN-QQVEFLACGGSHTALL 269

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           T +G+V++FG+G    LGH    +EL+PR +      G  V +++ G  H +A
Sbjct: 270 TTDGLVFTFGAGKYGQLGHNSTQNELRPRLVTEL--AGNRVTQIACGRRHTLA 320



 Score = 52.0 bits (123), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 56/111 (50%), Gaps = 4/111 (3%)

Query: 235 GHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
           G +   G N HGQLG G      PTP+++  L  V  +VQI+AG ++ +A++ +G VYS+
Sbjct: 168 GELFAWGQNLHGQLGVGRLFASIPTPQAVEHLSGV-PLVQISAGKAHSMALSMSGNVYSW 226

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G      LG G    E  P  I+T   + +    ++ G  H   L + G V
Sbjct: 227 GRNDLGQLGLGHTDGEDFPSLIETLDNQQVEF--LACGGSHTALLTTDGLV 275


>gi|432856462|ref|XP_004068433.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Oryzias latipes]
          Length = 4777

 Score = 89.0 bits (219), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 119/251 (47%), Gaps = 12/251 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 3973 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4026

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV ++A   H+A +  SG++FT G       GH D+   + +P+LV+AL+G
Sbjct: 4027 VIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYGRLGHGDSEDQL-KPKLVDALQG 4085

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 V   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4086 HRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4144

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4145 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4202

Query: 334  HVVALDSSGYV 344
            H V     G V
Sbjct: 4203 HCVCCTEDGEV 4213



 Score = 87.8 bits (216), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 110/231 (47%), Gaps = 9/231 (3%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPET---TQCVSFTRINFPSAAHVVQVSASENHA 175
           G++   L ++  V+S G    G LGHG  T      +  T     +   VVQ++    ++
Sbjct: 455 GQHFLALSTSGEVYSWGCGDGGRLGHGDATYLEEPALITTFSGKQTGKQVVQIACGSTYS 514

Query: 176 AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI-- 233
           A V   G+++T G  +    GH  ++  +  P LV ALKG     V  G      L +  
Sbjct: 515 AAVTADGELYTWGRGNYGRLGH-GSSEDVTTPMLVTALKGQKVVDVACGSGDAQTLAVTE 573

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V + G   +G+LG G +    TPK +  L+++  +V++  G  + +A+T +G VY++
Sbjct: 574 NGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDL-DIVKVCCGSQFSVALTKDGQVYTW 632

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G G N  LGHG       P+ + +   +G  VV ++ G  H +AL   G V
Sbjct: 633 GKGDNQRLGHGTDEHVRYPKLLDSL--QGKKVVDIAVGSTHCLALTDEGEV 681



 Score = 87.8 bits (216), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 73/228 (32%), Positives = 106/228 (46%), Gaps = 7/228 (3%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+   L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3018 GRHAMALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAI 3076

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG++++ G       GH D N    RP+LV+ L G    QV  G     T  LT  G 
Sbjct: 3077 TSSGELYSWGLGEYGRLGHGD-NTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGL 3135

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3136 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3194

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG V
Sbjct: 3195 DYFRLGHGTDVHVRKPQIVEGLR--GKKIVHVAVGALHCLAVTDSGQV 3240



 Score = 73.9 bits (180), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 57/188 (30%), Positives = 93/188 (49%), Gaps = 7/188 (3%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
            SA +VVQV+        V   G+++ CG+ ++   G   ++  I  PR + AL     K+
Sbjct: 2952 SALNVVQVAGGSKSLFAVTVEGKIYACGEATNGRLGLGLSSGTIQIPRQISALSNYVVKK 3011

Query: 221  VT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
            V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA G 
Sbjct: 3012 VAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIACGS 3070

Query: 279  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVV 336
            S+  A+T +G +YS+G G    LGHG+   +L+P+ ++     G  V++V+ G  D   +
Sbjct: 3071 SHSAAITSSGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLL--GHRVIQVACGSRDAQTL 3128

Query: 337  ALDSSGYV 344
            AL   G V
Sbjct: 3129 ALTDEGLV 3136



 Score = 68.2 bits (165), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 101/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  I++S  ++S G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3066 IACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQ-LRPKLVKVLLGHRVIQVACGSRD 3124

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3125 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3183

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3184 KSGVVWTWGKGDYFRLGHGTDVHVRKPQIVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3242

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3243 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3285



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 54/189 (28%), Positives = 86/189 (45%), Gaps = 16/189 (8%)

Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
           S+  V Q+  SE     + +SG V+T    S+              P L+  L      +
Sbjct: 400 SSTGVTQIVCSEKVFLILSRSGAVYTQNYKST-----------TLAPMLIHGLSSRKIVK 448

Query: 221 VTAGLNFTGFLTIR--GHVHTCGSNTHGQLGHGDT--LDRPTPKSIAPLEEVGS-VVQIA 275
           + A  +   FL +   G V++ G    G+LGHGD   L+ P   +    ++ G  VVQIA
Sbjct: 449 LAAHPDGQHFLALSTSGEVYSWGCGDGGRLGHGDATYLEEPALITTFSGKQTGKQVVQIA 508

Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
            G +Y  AVT +G +Y++G G+   LGHG   D   P  +   + + +  V   +GD   
Sbjct: 509 CGSTYSAAVTADGELYTWGRGNYGRLGHGSSEDVTTPMLVTALKGQKVVDVACGSGDAQT 568

Query: 336 VALDSSGYV 344
           +A+  +G V
Sbjct: 569 LAVTENGQV 577



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/164 (30%), Positives = 79/164 (48%), Gaps = 9/164 (5%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G ++ CG 
Sbjct: 2922 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKIYACGE 2980

Query: 243  NTHGQLGHGDTLDRPT---PKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
             T+G+LG G  L   T   P+ I+ L   V   V + +G  + +A+T +G V+S+G G +
Sbjct: 2981 ATNGRLGLG--LSSGTIQIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDD 3038

Query: 299  FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
              LGH  + +  +PR I+  + K I    ++ G  H  A+ SSG
Sbjct: 3039 GKLGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAAITSSG 3080



 Score = 54.7 bits (130), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 75/167 (44%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  +  V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4095 SGDAQTLCLTDDDMVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4153

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4154 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4212

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    + ++A G ++ LA
Sbjct: 4213 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKINRVACGSAHTLA 4258



 Score = 54.3 bits (129), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 49/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122  HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 3126 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 3184

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SG V+T G    F  GH  T+  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 3185 SGVVWTWGKGDYFRLGH-GTDVHVRKPQIVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3243

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 3244 GDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 3287



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 86/189 (45%), Gaps = 17/189 (8%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   +       +V+V      + 
Sbjct: 563 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLVEKLQDLDIVKVCCGSQFSV 621

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV+T G   +   GH  T+  +  P+L+++L+G     +  G      LT  G 
Sbjct: 622 ALTKDGQVYTWGKGDNQRLGH-GTDEHVRYPKLLDSLQGKKVVDIAVGSTHCLALTDEGE 680

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           VH+ GSN   +L H DTL  ++  PK++  L     +V I+ GP         G  +++ 
Sbjct: 681 VHSWGSND--KLQHFDTLFPNKKQPKALPGLNS-KHIVGISCGP---------GQSFAWS 728

Query: 295 SGSNFCLGH 303
           S S + +G 
Sbjct: 729 SCSEWSVGQ 737



 Score = 48.5 bits (114), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 67/137 (48%), Gaps = 3/137 (2%)

Query: 207  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            P   EAL  +   Q+  G      +T  G ++  G    G+LG G T    TP  +  ++
Sbjct: 3919 PTPTEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQ 3978

Query: 267  EVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
             V    V + +G  + LA++  G VYS+G   +  LGHG +    +PR I++ R  G+ V
Sbjct: 3979 HVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLR--GVEV 4036

Query: 326  VRVSAGDEHVVALDSSG 342
            V ++AG  H   + +SG
Sbjct: 4037 VDIAAGGAHSACITASG 4053



 Score = 40.8 bits (94), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 7/113 (6%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3895 GTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPV----QLIGGEQTLFAVTADGKLY 3950

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G V
Sbjct: 3951 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4003


>gi|440911989|gb|ELR61602.1| E3 ubiquitin-protein ligase HERC2 [Bos grunniens mutus]
          Length = 4835

 Score = 89.0 bits (219), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 118/251 (47%), Gaps = 12/251 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4031 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4084

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4085 VIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4143

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 V   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4144 HRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4202

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4203 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4260

Query: 334  HVVALDSSGYV 344
            H V     G V
Sbjct: 4261 HCVCCSEDGEV 4271



 Score = 87.8 bits (216), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 72/228 (31%), Positives = 107/228 (46%), Gaps = 7/228 (3%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3055 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3113

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3114 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3172

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3173 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3231

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G V
Sbjct: 3232 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDAGQV 3277



 Score = 87.4 bits (215), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 110/237 (46%), Gaps = 17/237 (7%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 169
           + G ++  L +   V+S G    G LGHG       P+     S  +    +  HVV ++
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AGKHVVHIA 558

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G     
Sbjct: 559 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQ 617

Query: 230 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
            L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSVALTKD 676

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V
Sbjct: 677 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEV 731



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 69/221 (31%), Positives = 110/221 (49%), Gaps = 12/221 (5%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFT 186
             V++CG +  G LG G  ++  V   R     +++VV+   V +   HA  +   G+VF+
Sbjct: 3011 KVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3069

Query: 187  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
             G+      GH  +     +PRL+EALK    + +  G + +  LT  G ++T G   +G
Sbjct: 3070 WGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 3128

Query: 247  QLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGH 303
            +LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG 
Sbjct: 3129 RLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGR 3186

Query: 304  GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            G       P+ I+  R  G  V ++  G +  +AL  SG V
Sbjct: 3187 GGSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVV 3225



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/187 (31%), Positives = 94/187 (50%), Gaps = 20/187 (10%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 502

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 620

Query: 338 LDSSGYV 344
           +  +G V
Sbjct: 621 VTENGQV 627



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 91/190 (47%), Gaps = 11/190 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2989 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3046

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L +   +  IA 
Sbjct: 3047 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL-KTKRIRDIAC 3105

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3106 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3163

Query: 335  VVALDSSGYV 344
             +AL   G V
Sbjct: 3164 TLALTDEGLV 3173



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 99/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3103 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3161

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3162 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3220

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 3221 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDAGQVYA 3279

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3280 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3322



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 77/162 (47%), Gaps = 5/162 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2959 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3017

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3018 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3077

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG
Sbjct: 3078 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSG 3117



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/228 (25%), Positives = 99/228 (43%), Gaps = 7/228 (3%)

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA--FV 178
           Y   + +   +++ G    G LGHG    + +            V+ V+     A    V
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAV 621

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
            ++GQV++ GD      G R  +     P+L+E L+ +   +V  G  F+  LT  G V+
Sbjct: 622 TENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVY 680

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           + G   + +LGHG       PK +  L+    V+ +AAG ++ LA+T +  V+S+GS   
Sbjct: 681 SWGKGDNQRLGHGTEEHVRYPKLLEGLQG-KKVIDVAAGSTHCLALTEDSEVHSWGSNDQ 739

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSL 346
                  +  + +P A+     K  H+V ++ G     A  S    S+
Sbjct: 740 CQHFDTLRVTKPEPSALPGLDTK--HIVGIACGPAQSFAWSSCSEWSI 785



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSV 671

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 731 VHSWGSNDQCQ--HFDTLRVTKPEPSALPGL-DTKHIVGIACGPAQSFA 776



 Score = 54.7 bits (130), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4153 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4211

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       +  G 
Sbjct: 4212 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGE 4270

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4271 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4316



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122  HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 3163 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 3221

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SG V+T G    F  GH  ++  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 3222 SGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAW 3280

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 3281 GDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 3324



 Score = 46.6 bits (109), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 66/137 (48%), Gaps = 3/137 (2%)

Query: 207  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            P   EAL  +   Q+  G      +T  G ++  G    G+LG G T    TP  +  ++
Sbjct: 3977 PTPCEALAALRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGVGGTESVSTPTLLESIQ 4036

Query: 267  EVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
             V    V + +G  + LA++  G VYS+G   +  LGHG +    +PR I++ R  G  V
Sbjct: 4037 HVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLR--GTEV 4094

Query: 326  VRVSAGDEHVVALDSSG 342
            V V+AG  H   + ++G
Sbjct: 4095 VDVAAGGAHSACVTAAG 4111



 Score = 41.2 bits (95), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 7/113 (6%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3953 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPV----QLIGGEQTLFAVTADGKLY 4008

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G V
Sbjct: 4009 ATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4061


>gi|4079811|gb|AAD08658.1| Herc2 [Mus musculus]
          Length = 4836

 Score = 89.0 bits (219), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 75/235 (31%), Positives = 109/235 (46%), Gaps = 21/235 (8%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGH-------GPETTQCVSFTRINFPSAAHVVQVSAS 171
            GR+ T L  +  VFS G    G LGH        P   Q +   RI          ++  
Sbjct: 3057 GRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIQALKTKRIR--------DIAYG 3108

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TG 229
             +H+A +  SG+++T G       GH D N    +P++V+ L G    QV  G     T 
Sbjct: 3109 SSHSAPLTSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3167

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             LT  G V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GV
Sbjct: 3168 ALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGV 3226

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            V+++G G  F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG V
Sbjct: 3227 VWTWGKGDYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQV 3279



 Score = 87.8 bits (216), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 118/251 (47%), Gaps = 12/251 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4032 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4085

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4086 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4144

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4145 HRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4203

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4204 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4261

Query: 334  HVVALDSSGYV 344
            H V     G V
Sbjct: 4262 HCVCCTEDGEV 4272



 Score = 85.5 bits (210), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 109/237 (45%), Gaps = 17/237 (7%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 169
           + G ++  L +   V+S G    G LGHG       P+     S  +    +  HVV ++
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AGKHVVHIA 558

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G     
Sbjct: 559 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQ 617

Query: 230 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
            L +   G V + G   +G+LG G +    TPK I  L+++  V+++  G  + +A+T +
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVIKVRCGSQFSIALTKD 676

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H + L     V
Sbjct: 677 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLVLTEDSEV 731



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 57/187 (30%), Positives = 94/187 (50%), Gaps = 20/187 (10%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V+QV+ +E     + ++G+V+T   NS            +  P+LV+ L      ++ A 
Sbjct: 454 VMQVACAEKRFLILSRNGRVYTQAYNSD-----------MLAPQLVQGLASRNIVKIAAH 502

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 620

Query: 338 LDSSGYV 344
           +  +G V
Sbjct: 621 VTENGQV 627



 Score = 72.4 bits (176), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 58/190 (30%), Positives = 91/190 (47%), Gaps = 11/190 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V++CG+  N     G      PI  PR + AL     
Sbjct: 2991 SALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPI--PRQITALSSYVV 3048

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L +   +  IA 
Sbjct: 3049 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIQAL-KTKRIRDIAY 3107

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+   +T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3108 GSSHSAPLTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3165

Query: 335  VVALDSSGYV 344
             +AL   G V
Sbjct: 3166 TLALTDEGLV 3175



 Score = 67.8 bits (164), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3105 IAYGSSHSAPLTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3163

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3164 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3222

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3223 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3281

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3282 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3324



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 77/162 (47%), Gaps = 5/162 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V++CG 
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGE 3019

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3020 ATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3079

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            LGH  + +  +PR IQ  + K I    ++ G  H   L SSG
Sbjct: 3080 LGHFSRMNCDKPRLIQALKTKRIR--DIAYGSSHSAPLTSSG 3119



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 81/177 (45%), Gaps = 5/177 (2%)

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA--FV 178
           Y   + +   +++ G    G LGHG    + +            V+ V+     A    V
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAV 621

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
            ++GQV++ GD      G R  +     P+L+E L+ +   +V  G  F+  LT  G V+
Sbjct: 622 TENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVY 680

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
           + G   + +LGHG       PK +  L+    V+ +AAG ++ L +T +  V+S+GS
Sbjct: 681 SWGKGDNQRLGHGTEEHVRYPKLLEGLQG-KKVIDVAAGSTHCLVLTEDSEVHSWGS 736



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4154 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4212

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4213 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4271

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4272 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4317



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 74/168 (44%), Gaps = 6/168 (3%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       V++V      + 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVIKVRCGSQFSI 671

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLVLTEDSE 730

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL    P+  A P  +   +V IA GP+   A
Sbjct: 731 VHSWGSNDQCQ--HFDTLGVTKPEPTAFPGLDSKHIVGIACGPAQSFA 776



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122  HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 3165 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 3223

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SG V+T G    F  GH  ++  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 3224 SGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3282

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 3283 GDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 3326



 Score = 47.8 bits (112), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 67/137 (48%), Gaps = 3/137 (2%)

Query: 207  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            P   EAL  +   Q+  G      +T  G ++  G    G+LG G T    TP  +  ++
Sbjct: 3978 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQ 4037

Query: 267  EVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
             V    V + +G  + LA++  G VYS+G   +  LGHG +    +PR I++ R  GI V
Sbjct: 4038 HVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLR--GIEV 4095

Query: 326  VRVSAGDEHVVALDSSG 342
            V V+AG  H   + ++G
Sbjct: 4096 VDVAAGGAHSACVTAAG 4112



 Score = 41.2 bits (95), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 7/113 (6%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3954 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4009

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G V
Sbjct: 4010 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4062


>gi|350593458|ref|XP_003483691.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Sus
           scrofa]
          Length = 969

 Score = 89.0 bits (219), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 68/233 (29%), Positives = 108/233 (46%), Gaps = 9/233 (3%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHG---PETTQCVSFTRINFPSAAHVVQVSASEN 173
           + G ++  L +   V+S G    G LGHG   P     V        +  HVV ++    
Sbjct: 699 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 758

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G      L +
Sbjct: 759 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAV 817

Query: 234 --RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
              G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +G VY
Sbjct: 818 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSIALTKDGQVY 876

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           S+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V
Sbjct: 877 SWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEV 927



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/187 (31%), Positives = 94/187 (50%), Gaps = 20/187 (10%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 650 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIIKIAAH 698

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 699 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 758

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 759 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 816

Query: 338 LDSSGYV 344
           +  +G V
Sbjct: 817 VTENGQV 823



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 82/177 (46%), Gaps = 5/177 (2%)

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA--FV 178
           Y   + +   +++ G    G LGHG    + +            V+ V+     A    V
Sbjct: 759 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAV 817

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
            ++GQV++ GD      G R  +     P+L+E L+ +   +V  G  F+  LT  G V+
Sbjct: 818 TENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 876

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
           + G   + +LGHG       PK +  L+    V+ +AAG ++ LA+T +  V+S+GS
Sbjct: 877 SWGKGDNQRLGHGTEEHVRYPKLLEGLQGK-KVIDVAAGSTHCLALTEDSEVHSWGS 932



 Score = 54.7 bits (130), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 51/165 (30%), Positives = 75/165 (45%), Gaps = 8/165 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 809 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 867

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 868 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 926

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPS 279
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+
Sbjct: 927 VHSWGSNDQCQ--HFDTLRVTKPEPSALPGL-DTKHIVGIACGPA 968


>gi|329663335|ref|NP_001193010.1| E3 ubiquitin-protein ligase HERC2 [Bos taurus]
 gi|296490789|tpg|DAA32902.1| TPA: hect domain and RLD 3-like [Bos taurus]
          Length = 4837

 Score = 89.0 bits (219), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 118/251 (47%), Gaps = 12/251 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4033 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4086

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4087 VIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4145

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 V   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4146 HRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4204

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4205 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4262

Query: 334  HVVALDSSGYV 344
            H V     G V
Sbjct: 4263 HCVCCSEDGEV 4273



 Score = 87.8 bits (216), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 72/228 (31%), Positives = 107/228 (46%), Gaps = 7/228 (3%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3057 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3115

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3116 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3174

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3175 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3233

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G V
Sbjct: 3234 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDAGQV 3279



 Score = 87.4 bits (215), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 110/237 (46%), Gaps = 17/237 (7%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 169
           + G ++  L +   V+S G    G LGHG       P+     S  +    +  HVV ++
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AGKHVVHIA 558

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G     
Sbjct: 559 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQ 617

Query: 230 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
            L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSVALTKD 676

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V
Sbjct: 677 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEV 731



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 69/221 (31%), Positives = 110/221 (49%), Gaps = 12/221 (5%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFT 186
             V++CG +  G LG G  ++  V   R     +++VV+   V +   HA  +   G+VF+
Sbjct: 3013 KVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3071

Query: 187  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
             G+      GH  +     +PRL+EALK    + +  G + +  LT  G ++T G   +G
Sbjct: 3072 WGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 3130

Query: 247  QLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGH 303
            +LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG 
Sbjct: 3131 RLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGR 3188

Query: 304  GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            G       P+ I+  R  G  V ++  G +  +AL  SG V
Sbjct: 3189 GGSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVV 3227



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/187 (31%), Positives = 94/187 (50%), Gaps = 20/187 (10%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 502

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 620

Query: 338 LDSSGYV 344
           +  +G V
Sbjct: 621 VTENGQV 627



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 91/190 (47%), Gaps = 11/190 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2991 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3048

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L +   +  IA 
Sbjct: 3049 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL-KTKRIRDIAC 3107

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3108 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3165

Query: 335  VVALDSSGYV 344
             +AL   G V
Sbjct: 3166 TLALTDEGLV 3175



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 99/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3105 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3163

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3164 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3222

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 3223 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDAGQVYA 3281

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3282 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3324



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 77/162 (47%), Gaps = 5/162 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3019

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3020 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3079

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG
Sbjct: 3080 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSG 3119



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/228 (25%), Positives = 99/228 (43%), Gaps = 7/228 (3%)

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA--FV 178
           Y   + +   +++ G    G LGHG    + +            V+ V+     A    V
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAV 621

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
            ++GQV++ GD      G R  +     P+L+E L+ +   +V  G  F+  LT  G V+
Sbjct: 622 TENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVY 680

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           + G   + +LGHG       PK +  L+    V+ +AAG ++ LA+T +  V+S+GS   
Sbjct: 681 SWGKGDNQRLGHGTEEHVRYPKLLEGLQG-KKVIDVAAGSTHCLALTEDSEVHSWGSNDQ 739

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSL 346
                  +  + +P A+     K  H+V ++ G     A  S    S+
Sbjct: 740 CQHFDTLRVTKPEPSALPGLDTK--HIVGIACGPAQSFAWSSCSEWSI 785



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSV 671

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 731 VHSWGSNDQCQ--HFDTLRVTKPEPSALPGL-DTKHIVGIACGPAQSFA 776



 Score = 54.7 bits (130), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4155 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4213

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       +  G 
Sbjct: 4214 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGE 4272

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4273 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4318



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122  HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 3165 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 3223

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SG V+T G    F  GH  ++  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 3224 SGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAW 3282

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 3283 GDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 3326



 Score = 46.6 bits (109), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 66/137 (48%), Gaps = 3/137 (2%)

Query: 207  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            P   EAL  +   Q+  G      +T  G ++  G    G+LG G T    TP  +  ++
Sbjct: 3979 PTPCEALAALRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGVGGTESVSTPTLLESIQ 4038

Query: 267  EVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
             V    V + +G  + LA++  G VYS+G   +  LGHG +    +PR I++ R  G  V
Sbjct: 4039 HVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLR--GTEV 4096

Query: 326  VRVSAGDEHVVALDSSG 342
            V V+AG  H   + ++G
Sbjct: 4097 VDVAAGGAHSACVTAAG 4113



 Score = 41.2 bits (95), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 7/113 (6%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3955 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPV----QLIGGEQTLFAVTADGKLY 4010

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G V
Sbjct: 4011 ATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4063


>gi|27882442|gb|AAH44667.1| Herc2 protein, partial [Mus musculus]
          Length = 1183

 Score = 89.0 bits (219), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 118/251 (47%), Gaps = 12/251 (4%)

Query: 96  FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
            L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 379 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 432

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
            I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 433 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 491

Query: 216 VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 492 HRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 550

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 551 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 608

Query: 334 HVVALDSSGYV 344
           H V     G V
Sbjct: 609 HCVCCTEDGEV 619



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118 TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 501 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 559

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 560 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 618

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 619 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 664



 Score = 48.1 bits (113), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 67/137 (48%), Gaps = 3/137 (2%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P   EAL  +   Q+  G      +T  G ++  G    G+LG G T    TP  +  ++
Sbjct: 325 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQ 384

Query: 267 EVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
            V    V + +G  + LA++  G VYS+G   +  LGHG +    +PR I++ R  GI V
Sbjct: 385 HVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLR--GIEV 442

Query: 326 VRVSAGDEHVVALDSSG 342
           V V+AG  H   + ++G
Sbjct: 443 VDVAAGGAHSACVTAAG 459



 Score = 41.2 bits (95), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 7/113 (6%)

Query: 235 GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 301 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 356

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           + G G+   LG G       P  +++ +   I  V V++G +H +AL S G V
Sbjct: 357 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 409


>gi|301755908|ref|XP_002913790.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           3 [Ailuropoda melanoleuca]
          Length = 1054

 Score = 88.6 bits (218), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 120/252 (47%), Gaps = 10/252 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL-RTQKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYV 344
           H  A + SSG +
Sbjct: 305 HTSAFVPSSGRI 316



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 107/226 (47%), Gaps = 7/226 (3%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGV 263



 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIVQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 96/213 (45%), Gaps = 9/213 (4%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G +   +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQAS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           P+ I++    GI  ++V+AG  H   L  SG +
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAI 211


>gi|403273883|ref|XP_003928727.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Saimiri boliviensis boliviensis]
          Length = 1049

 Score = 88.6 bits (218), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 120/252 (47%), Gaps = 10/252 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYV 344
           H  A + SSG +
Sbjct: 305 HTSAFVPSSGRI 316



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIVQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 107/226 (47%), Gaps = 7/226 (3%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGV 263



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 95/213 (44%), Gaps = 9/213 (4%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           P+ I++    GI  ++V+AG  H   L  SG +
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAI 211


>gi|344239412|gb|EGV95515.1| putative E3 ubiquitin-protein ligase HERC2 [Cricetulus griseus]
          Length = 958

 Score = 88.6 bits (218), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 118/251 (47%), Gaps = 12/251 (4%)

Query: 96  FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
            L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 301 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 354

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
            I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 355 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 413

Query: 216 VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 414 HRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 472

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 473 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 530

Query: 334 HVVALDSSGYV 344
           H V     G V
Sbjct: 531 HCVCCTEDGEV 541



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 77/167 (46%), Gaps = 4/167 (2%)

Query: 118 TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 423 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 481

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + +SG V+T G       GH  ++  + RPR V+ L+G     +  G       T  G 
Sbjct: 482 ALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 540

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 541 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 586



 Score = 47.8 bits (112), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 67/137 (48%), Gaps = 3/137 (2%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P   EAL  +   Q+  G      +T  G ++  G    G+LG G T    TP  +  ++
Sbjct: 247 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQ 306

Query: 267 EVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
            V    V + +G  + LA++  G VYS+G   +  LGHG +    +PR I++ R  GI V
Sbjct: 307 HVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLR--GIEV 364

Query: 326 VRVSAGDEHVVALDSSG 342
           V V+AG  H   + ++G
Sbjct: 365 VDVAAGGAHSACVTAAG 381



 Score = 40.8 bits (94), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 7/113 (6%)

Query: 235 GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 223 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 278

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           + G G+   LG G       P  +++ +   I  V V++G +H +AL S G V
Sbjct: 279 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 331


>gi|188038845|gb|ACD47036.1| ASL1/Herc2 fusion protein [Mus musculus]
          Length = 4746

 Score = 88.6 bits (218), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 75/235 (31%), Positives = 109/235 (46%), Gaps = 21/235 (8%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGH-------GPETTQCVSFTRINFPSAAHVVQVSAS 171
            GR+ T L  +  VFS G    G LGH        P   Q +   RI          ++  
Sbjct: 2967 GRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIQALKTKRIR--------DIAYG 3018

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TG 229
             +H+A +  SG+++T G       GH D N    +P++V+ L G    QV  G     T 
Sbjct: 3019 SSHSAPLTSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3077

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             LT  G V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GV
Sbjct: 3078 ALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGV 3136

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            V+++G G  F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG V
Sbjct: 3137 VWTWGKGDYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQV 3189



 Score = 87.4 bits (215), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 118/251 (47%), Gaps = 12/251 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 3942 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 3995

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 3996 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4054

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4055 HRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4113

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4114 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4171

Query: 334  HVVALDSSGYV 344
            H V     G V
Sbjct: 4172 HCVCCTEDGEV 4182



 Score = 85.5 bits (210), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 109/237 (45%), Gaps = 17/237 (7%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 169
           + G ++  L +   V+S G    G LGHG       P+     S  +    +  HVV ++
Sbjct: 413 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AGKHVVHIA 468

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G     
Sbjct: 469 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQ 527

Query: 230 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
            L +   G V + G   +G+LG G +    TPK I  L+++  V+++  G  + +A+T +
Sbjct: 528 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVIKVRCGSQFSIALTKD 586

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H + L     V
Sbjct: 587 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLVLTEDSEV 641



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 57/187 (30%), Positives = 94/187 (50%), Gaps = 20/187 (10%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V+QV+ +E     + ++G+V+T   NS            +  P+LV+ L      ++ A 
Sbjct: 364 VMQVACAEKRFLILSRNGRVYTQAYNSD-----------MLAPQLVQGLASRNIVKIAAH 412

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 413 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 472

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 473 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 530

Query: 338 LDSSGYV 344
           +  +G V
Sbjct: 531 VTENGQV 537



 Score = 72.4 bits (176), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 58/190 (30%), Positives = 91/190 (47%), Gaps = 11/190 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V++CG+  N     G      PI  PR + AL     
Sbjct: 2901 SALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPI--PRQITALSSYVV 2958

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L +   +  IA 
Sbjct: 2959 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIQAL-KTKRIRDIAY 3017

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+   +T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3018 GSSHSAPLTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3075

Query: 335  VVALDSSGYV 344
             +AL   G V
Sbjct: 3076 TLALTDEGLV 3085



 Score = 67.8 bits (164), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3015 IAYGSSHSAPLTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3073

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3074 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3132

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3133 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3191

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3192 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3234



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 77/162 (47%), Gaps = 5/162 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V++CG 
Sbjct: 2871 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGE 2929

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 2930 ATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 2989

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            LGH  + +  +PR IQ  + K I    ++ G  H   L SSG
Sbjct: 2990 LGHFSRMNCDKPRLIQALKTKRIR--DIAYGSSHSAPLTSSG 3029



 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 81/177 (45%), Gaps = 5/177 (2%)

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA--FV 178
           Y   + +   +++ G    G LGHG    + +            V+ V+     A    V
Sbjct: 473 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAV 531

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
            ++GQV++ GD      G R  +     P+L+E L+ +   +V  G  F+  LT  G V+
Sbjct: 532 TENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVY 590

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
           + G   + +LGHG       PK +  L+    V+ +AAG ++ L +T +  V+S+GS
Sbjct: 591 SWGKGDNQRLGHGTEEHVRYPKLLEGLQG-KKVIDVAAGSTHCLVLTEDSEVHSWGS 646



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4064 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4122

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4123 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4181

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4182 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4227



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 74/168 (44%), Gaps = 6/168 (3%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       V++V      + 
Sbjct: 523 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVIKVRCGSQFSI 581

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 582 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLVLTEDSE 640

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL    P+  A P  +   +V IA GP+   A
Sbjct: 641 VHSWGSNDQCQ--HFDTLGVTKPEPTAFPGLDSKHIVGIACGPAQSFA 686



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122  HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 3075 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 3133

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SG V+T G    F  GH  ++  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 3134 SGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3192

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 3193 GDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 3236



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 67/137 (48%), Gaps = 3/137 (2%)

Query: 207  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            P   EAL  +   Q+  G      +T  G ++  G    G+LG G T    TP  +  ++
Sbjct: 3888 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQ 3947

Query: 267  EVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
             V    V + +G  + LA++  G VYS+G   +  LGHG +    +PR I++ R  GI V
Sbjct: 3948 HVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLR--GIEV 4005

Query: 326  VRVSAGDEHVVALDSSG 342
            V V+AG  H   + ++G
Sbjct: 4006 VDVAAGGAHSACVTAAG 4022



 Score = 41.2 bits (95), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 7/113 (6%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3864 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 3919

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G V
Sbjct: 3920 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 3972


>gi|403273885|ref|XP_003928728.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Saimiri boliviensis boliviensis]
          Length = 1057

 Score = 88.6 bits (218), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 120/252 (47%), Gaps = 10/252 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYV 344
           H  A + SSG +
Sbjct: 305 HTSAFVPSSGRI 316



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIVQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 107/226 (47%), Gaps = 7/226 (3%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGV 263



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 95/213 (44%), Gaps = 9/213 (4%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           P+ I++    GI  ++V+AG  H   L  SG +
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAI 211


>gi|73952751|ref|XP_860006.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 9
           [Canis lupus familiaris]
          Length = 1054

 Score = 88.6 bits (218), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 119/252 (47%), Gaps = 10/252 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + + G+ F  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKEGEFFCWGQNKYGQLGLGIDCKKQASPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL-RTQKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYV 344
           H  A + SSG +
Sbjct: 305 HTSAFVPSSGRI 316



 Score = 81.3 bits (199), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 107/226 (47%), Gaps = 7/226 (3%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+  G    
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKEGEFFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGV 263



 Score = 78.6 bits (192), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 117/251 (46%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIVQVACGYYHSLALSK 154

Query: 129 SSVFSC-GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
              F C G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F  
Sbjct: 155 EGEFFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 96/213 (45%), Gaps = 9/213 (4%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
                 P++I  L ++  +VQ+A G  + LA++  G  + +G      LG G +   +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKEGEFFCWGQNKYGQLGLGIDCKKQAS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           P+ I++    GI  ++V+AG  H   L  SG +
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAI 211


>gi|340729980|ref|XP_003403270.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Bombus
           terrestris]
          Length = 1104

 Score = 88.6 bits (218), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 62/223 (27%), Positives = 109/223 (48%), Gaps = 9/223 (4%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFT-RINFPSAAHVVQVSASENHAAFVLQSGQ 183
           L+    +F  G++  G LG G    + +     ++F  A+ + Q++  EN+   +   G+
Sbjct: 43  LLKKEDMFCWGNTRHGELGLGGIEDEIILVPCEVDFKKASEIQQIACGENYTVVITHDGK 102

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           +++CG+N     GH    +   R +L+  L     K+   G   T  +   G + + GSN
Sbjct: 103 IYSCGNNDYGQLGHEQGRK---RLQLILGLDAFVFKKAACGAYHTIAVNEWGQLFSWGSN 159

Query: 244 THGQLG-HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
           + GQLG +       +P+ +  L     +VQIA G  + LA+T NG +YS+GS S   LG
Sbjct: 160 SEGQLGLNSKNFMECSPRMVKTL-GTSIIVQIACGMKHALALTNNGELYSWGSNSEGQLG 218

Query: 303 HG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            G +   E++P+ I T    G+ +  ++ G  H +A+  SG +
Sbjct: 219 LGVDIRCEMKPKLINTL--AGVPIAFIACGGYHSIAISKSGAI 259



 Score = 88.6 bits (218), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 65/221 (29%), Positives = 105/221 (47%), Gaps = 4/221 (1%)

Query: 119 GRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 177
           G YHT+ ++    +FS GS+  G LG   +     S   +     + +VQ++    HA  
Sbjct: 140 GAYHTIAVNEWGQLFSWGSNSEGQLGLNSKNFMECSPRMVKTLGTSIIVQIACGMKHALA 199

Query: 178 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
           +  +G++++ G NS    G     R   +P+L+  L GVP   +  G   +  ++  G +
Sbjct: 200 LTNNGELYSWGSNSEGQLGLGVDIRCEMKPKLINTLAGVPIAFIACGGYHSIAISKSGAI 259

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
              G NT GQLG  DT +R  P  +  L     V   A G  + + +T +G V++ G+G 
Sbjct: 260 FGWGKNTFGQLGLNDTQNRNLPYQLQTLRN-AKVCYAACGEEFSVFLTVDGGVFTCGAGM 318

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
              LGHG  ++E+ PR  Q     G  V ++S G  H +AL
Sbjct: 319 YGQLGHGSNNNEILPR--QVMELMGSTVTQISCGKRHTLAL 357



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 70/238 (29%), Positives = 107/238 (44%), Gaps = 14/238 (5%)

Query: 115 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGH--GPETTQCV-SFTRINFPSAAHVVQVSA 170
           QI  G  +T++I+ +  ++SCG++  G LGH  G +  Q +       F  AA       
Sbjct: 86  QIACGENYTVVITHDGKIYSCGNNDYGQLGHEQGRKRLQLILGLDAFVFKKAA------C 139

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
              H   V + GQ+F+ G NS    G    N     PR+V+ L      Q+  G+     
Sbjct: 140 GAYHTIAVNEWGQLFSWGSNSEGQLGLNSKNFMECSPRMVKTLGTSIIVQIACGMKHALA 199

Query: 231 LTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
           LT  G +++ GSN+ GQLG G D      PK I  L  V  +  IA G  + +A++ +G 
Sbjct: 200 LTNNGELYSWGSNSEGQLGLGVDIRCEMKPKLINTLAGV-PIAFIACGGYHSIAISKSGA 258

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSLC 347
           ++ +G  +   LG  +  +   P  +QT R     V   + G+E  V L   G V  C
Sbjct: 259 IFGWGKNTFGQLGLNDTQNRNLPYQLQTLRNA--KVCYAACGEEFSVFLTVDGGVFTC 314



 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 65/149 (43%), Gaps = 4/149 (2%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G YH++ IS S ++F  G +  G LG      + + + ++     A V   +  E  
Sbjct: 243 IACGGYHSIAISKSGAIFGWGKNTFGQLGLNDTQNRNLPY-QLQTLRNAKVCYAACGEEF 301

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFLTI 233
           + F+   G VFTCG       GH   N  I  PR V  L G    Q++ G   T   +  
Sbjct: 302 SVFLTVDGGVFTCGAGMYGQLGHGSNNNEIL-PRQVMELMGSTVTQISCGKRHTLALVPS 360

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           +G V+  G    GQLG+  T    TP+ +
Sbjct: 361 QGRVYAWGLGGAGQLGNNSTRSTTTPQVV 389


>gi|149689920|ref|XP_001503636.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Equus caballus]
          Length = 1057

 Score = 88.6 bits (218), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 120/252 (47%), Gaps = 10/252 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDYKKQASPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYFPNLLKSL-RTQKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYV 344
           H  A + SSG +
Sbjct: 305 HTSAFVPSSGRI 316



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIVQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGIDYKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   F P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDRYF-PNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 107/226 (47%), Gaps = 7/226 (3%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLHDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDYKKQASPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V
Sbjct: 220 GQLGLNDENDRYFPNLLKSLRTQKI--VYICCGEDHTAALTKEGGV 263



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 96/213 (45%), Gaps = 9/213 (4%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLHDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G +   +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDYKKQAS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           P+ I++    GI  ++V+AG  H   L  SG +
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAI 211


>gi|255638076|gb|ACU19352.1| unknown [Glycine max]
          Length = 440

 Score = 88.6 bits (218), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 68/231 (29%), Positives = 110/231 (47%), Gaps = 7/231 (3%)

Query: 116 ITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           I  G  HTL  S S   ++S G    G LGHG  +   +    I       + Q++  ++
Sbjct: 70  IACGADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPIIAL-QGLRIKQIACGDS 128

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H   V   G+V + G N +   G   T+     P+ ++  +GVP K V AG   +  +T 
Sbjct: 129 HCLAVTMEGEVQSWGRNQNGQLG-LGTSEDSLVPQKIQTFQGVPIKMVAAGAEHSVAITE 187

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G ++  G   +G LG GD  DR  P+ ++ + +   +V +A G  + ++V+  G +Y++
Sbjct: 188 NGELYGWGWGRYGNLGLGDRNDRWIPEKVSSV-DCDKMVMVACGWRHTISVSSLGGLYTY 246

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G      LGHG   D L P+ +Q    K I   +VS G  H +AL S+G +
Sbjct: 247 GWSKYGQLGHGNFEDSLVPQKLQALSDKLIS--QVSGGWRHSMALTSTGLL 295



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 60/181 (33%), Positives = 91/181 (50%), Gaps = 5/181 (2%)

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           + V+ +SA  +H   +L    V + G       GH DT+  +  P  + AL       + 
Sbjct: 13  SRVLLISAGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRLL-PTHLSALDAQQIDSIA 71

Query: 223 AGLNFT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
            G + T  +   R  +++ G    G+LGHG++ D   P+ I  L+ +  + QIA G S+ 
Sbjct: 72  CGADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPIIALQGL-RIKQIACGDSHC 130

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           LAVT  G V S+G   N  LG G   D L P+ IQTF  +G+ +  V+AG EH VA+  +
Sbjct: 131 LAVTMEGEVQSWGRNQNGQLGLGTSEDSLVPQKIQTF--QGVPIKMVAAGAEHSVAITEN 188

Query: 342 G 342
           G
Sbjct: 189 G 189



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 99/209 (47%), Gaps = 6/209 (2%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  H++ I+ N  ++  G    G LG G    + +   +++      +V V+    H
Sbjct: 175 VAAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRWIP-EKVSSVDCDKMVMVACGWRH 233

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V   G ++T G +     GH +    +  P+ ++AL      QV+ G   +  LT  
Sbjct: 234 TISVSSLGGLYTYGWSKYGQLGHGNFEDSLV-PQKLQALSDKLISQVSGGWRHSMALTST 292

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
           G ++  G N  GQ+G GD +DR +P  +  P ++   VVQI+ G  + +AVT    V+S+
Sbjct: 293 GLLYGWGWNKFGQVGVGDNVDRCSPVQVKFPHDQ--KVVQISCGWRHTIAVTEKENVFSW 350

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           G G+N  LGHG+  D   P+ I+     G
Sbjct: 351 GRGTNGQLGHGDTVDRNSPKIIEALSVDG 379



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/158 (30%), Positives = 74/158 (46%), Gaps = 3/158 (1%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + +  G  HT+ +S+   +++ G S  G LGHG      V   ++   S   + QVS   
Sbjct: 225 VMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGNFEDSLVP-QKLQALSDKLISQVSGGW 283

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  +G ++  G N     G  D N     P  V+        Q++ G   T  +T
Sbjct: 284 RHSMALTSTGLLYGWGWNKFGQVGVGD-NVDRCSPVQVKFPHDQKVVQISCGWRHTIAVT 342

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 270
            + +V + G  T+GQLGHGDT+DR +PK I  L   GS
Sbjct: 343 EKENVFSWGRGTNGQLGHGDTVDRNSPKIIEALSVDGS 380


>gi|440800955|gb|ELR21981.1| regulator of chromosome condensation (RCC1) repeat domain
           containing protein [Acanthamoeba castellanii str. Neff]
          Length = 447

 Score = 88.6 bits (218), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 70/210 (33%), Positives = 106/210 (50%), Gaps = 12/210 (5%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + I  G  H+L+++ S  V+S G    G LGHG +T   +   +I        V+V+A  
Sbjct: 221 VDIAAGSAHSLVVAESGDVYSFGLGSEGALGHG-DTDMSLVPKKIEHFVQRPAVKVAAGG 279

Query: 173 NHAA-----FVL-QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
           +H+      +VL Q G+V + G NS    G    +R I  P  V+        ++ AG +
Sbjct: 280 SHSLVLSKLYVLEQEGRVLSFGQNSYGQLGLGHFSRMIASPAQVQVE--AAAVEIEAGAH 337

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            +  LT  G V++ G   HGQLGHG+ L D P P  I  LE    +V +AAG ++ L ++
Sbjct: 338 HSLVLTNDGRVYSFGLAQHGQLGHGNDLRDNPEPTLIQSLERE-RIVDVAAGNNFSLVLS 396

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAI 315
             G V+SFG G N  LG G++ +  QP  +
Sbjct: 397 AEGTVFSFGCGKNGRLGKGDESNATQPTVV 426



 Score = 84.3 bits (207), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 65/179 (36%), Positives = 92/179 (51%), Gaps = 9/179 (5%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCC-----GHRDTNRPIFRPRLVEALKGVPCK 219
           V  VSA   H+    + G + + G  S+        GH D  R    PR V +L GV   
Sbjct: 111 VRDVSAGLYHSLVATKDGGLLSFGYGSANVVVDGRLGHGD-QRTQMIPRPVLSLSGVRIV 169

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
           +V AG + +  L+ +G+V + G    G LGHGD   +  PK I+ L+    VV IAAG +
Sbjct: 170 KVAAGAHHSLVLSDQGNVFSFGVGIDGSLGHGDQARQLVPKLISSLQRE-KVVDIAAGSA 228

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           + L V  +G VYSFG GS   LGHG+    L P+ I+ F ++    V+V+AG  H + L
Sbjct: 229 HSLVVAESGDVYSFGLGSEGALGHGDTDMSLVPKKIEHFVQR--PAVKVAAGGSHSLVL 285



 Score = 78.6 bits (192), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 78/293 (26%), Positives = 122/293 (41%), Gaps = 67/293 (22%)

Query: 115 QITTGRYHTLLISNSS---VFSCGSS---LCGVLGHGPETTQCVSFTRINFPSAAHVVQV 168
            ++ G YH+L+ +       F  GS+   + G LGHG + TQ +    ++  S   +V+V
Sbjct: 113 DVSAGLYHSLVATKDGGLLSFGYGSANVVVDGRLGHGDQRTQMIPRPVLSL-SGVRIVKV 171

Query: 169 SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
           +A  +H+  +   G VF+ G       GH D  R +  P+L+ +L+      + AG   +
Sbjct: 172 AAGAHHSLVLSDQGNVFSFGVGIDGSLGHGDQARQLV-PKLISSLQREKVVDIAAGSAHS 230

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDT------------LDRPTPKSIAP------------ 264
             +   G V++ G  + G LGHGDT            + RP  K  A             
Sbjct: 231 LVVAESGDVYSFGLGSEGALGHGDTDMSLVPKKIEHFVQRPAVKVAAGGSHSLVLSKLYV 290

Query: 265 LEEVGSV--------------------------------VQIAAGPSYMLAVTGNGVVYS 292
           LE+ G V                                V+I AG  + L +T +G VYS
Sbjct: 291 LEQEGRVLSFGQNSYGQLGLGHFSRMIASPAQVQVEAAAVEIEAGAHHSLVLTNDGRVYS 350

Query: 293 FGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           FG   +  LGHG    D  +P  IQ+  R+   +V V+AG+   + L + G V
Sbjct: 351 FGLAQHGQLGHGNDLRDNPEPTLIQSLERE--RIVDVAAGNNFSLVLSAEGTV 401



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/145 (34%), Positives = 79/145 (54%), Gaps = 8/145 (5%)

Query: 205 FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT-----HGQLGHGDTLDRPTP 259
            RP+ VEAL     + V+AGL  +   T  G + + G  +      G+LGHGD   +  P
Sbjct: 98  LRPKCVEALARERVRDVSAGLYHSLVATKDGGLLSFGYGSANVVVDGRLGHGDQRTQMIP 157

Query: 260 KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
           + +  L  V  +V++AAG  + L ++  G V+SFG G +  LGHG+Q  +L P+ I + +
Sbjct: 158 RPVLSLSGV-RIVKVAAGAHHSLVLSDQGNVFSFGVGIDGSLGHGDQARQLVPKLISSLQ 216

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYV 344
           R+   VV ++AG  H + +  SG V
Sbjct: 217 RE--KVVDIAAGSAHSLVVAESGDV 239



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 54/101 (53%), Gaps = 8/101 (7%)

Query: 249 GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-----NFCLGH 303
           GHGD +D+  PK +  L     V  ++AG  + L  T +G + SFG GS     +  LGH
Sbjct: 90  GHGDHVDKLRPKCVEALARE-RVRDVSAGLYHSLVATKDGGLLSFGYGSANVVVDGRLGH 148

Query: 304 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G+Q  ++ PR + +    G+ +V+V+AG  H + L   G V
Sbjct: 149 GDQRTQMIPRPVLSL--SGVRIVKVAAGAHHSLVLSDQGNV 187


>gi|444516741|gb|ELV11274.1| E3 ubiquitin-protein ligase HERC2 [Tupaia chinensis]
          Length = 894

 Score = 88.6 bits (218), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 68/233 (29%), Positives = 108/233 (46%), Gaps = 9/233 (3%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHG---PETTQCVSFTRINFPSAAHVVQVSASEN 173
           + G ++  L +   V+S G    G LGHG   P     V        +  HVV ++    
Sbjct: 545 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 604

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G      L +
Sbjct: 605 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAV 663

Query: 234 --RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
              G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +G VY
Sbjct: 664 TDNGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSIALTKDGQVY 722

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           S+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V
Sbjct: 723 SWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEV 773



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/187 (31%), Positives = 94/187 (50%), Gaps = 20/187 (10%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 496 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 544

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 545 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 604

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 605 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 662

Query: 338 LDSSGYV 344
           +  +G V
Sbjct: 663 VTDNGQV 669



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 81/177 (45%), Gaps = 5/177 (2%)

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA--FV 178
           Y   + +   +++ G    G LGHG    + +            V+ V+     A    V
Sbjct: 605 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAV 663

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
             +GQV++ GD      G R  +     P+L+E L+ +   +V  G  F+  LT  G V+
Sbjct: 664 TDNGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 722

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
           + G   + +LGHG       PK +  L+    V+ +AAG ++ LA+T +  V+S+GS
Sbjct: 723 SWGKGDNQRLGHGTEEHVRYPKLLEGLQG-KKVIDVAAGSTHCLALTEDSEVHSWGS 778



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 655 SGDAQTLAVTDNGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 713

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 714 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 772

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 773 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 818


>gi|402880679|ref|XP_003903925.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Papio anubis]
          Length = 979

 Score = 88.6 bits (218), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 75/252 (29%), Positives = 120/252 (47%), Gaps = 10/252 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   ++QV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYV 344
           H  A + SSG +
Sbjct: 305 HTSAFVPSSGRI 316



 Score = 81.3 bits (199), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIIQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 107/226 (47%), Gaps = 7/226 (3%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGV 263



 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 95/213 (44%), Gaps = 9/213 (4%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
                 P++I  L ++  ++Q+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           P+ I++    GI  ++V+AG  H   L  SG +
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAI 211


>gi|356516391|ref|XP_003526878.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
           max]
          Length = 440

 Score = 88.6 bits (218), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 68/231 (29%), Positives = 110/231 (47%), Gaps = 7/231 (3%)

Query: 116 ITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           I  G  HTL  S S   ++S G    G LGHG  +   +    I       + Q++  ++
Sbjct: 70  IACGADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPIIAL-QGLRIKQIACGDS 128

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H   V   G+V + G N +   G   T+     P+ ++  +GVP K V AG   +  +T 
Sbjct: 129 HCLAVTMEGEVQSWGRNQNGQLG-LGTSEDSLVPQKIQTFQGVPIKMVAAGAEHSVAITE 187

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G ++  G   +G LG GD  DR  P+ ++ + +   +V +A G  + ++V+  G +Y++
Sbjct: 188 NGELYGWGWGRYGNLGLGDRNDRWIPEKVSSV-DCDKMVMVACGWRHTISVSSLGGLYTY 246

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G      LGHG   D L P+ +Q    K I   +VS G  H +AL S+G +
Sbjct: 247 GWSKYGQLGHGNFEDSLVPQKLQALSDKLIS--QVSGGWRHSMALTSTGLL 295



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 60/181 (33%), Positives = 91/181 (50%), Gaps = 5/181 (2%)

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           + V+ +SA  +H   +L    V + G       GH DT+  +  P  + AL       + 
Sbjct: 13  SRVLLISAGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRLL-PTHLSALDAQQIDSIA 71

Query: 223 AGLNFT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
            G + T  +   R  +++ G    G+LGHG++ D   P+ I  L+ +  + QIA G S+ 
Sbjct: 72  CGADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPIIALQGL-RIKQIACGDSHC 130

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           LAVT  G V S+G   N  LG G   D L P+ IQTF  +G+ +  V+AG EH VA+  +
Sbjct: 131 LAVTMEGEVQSWGRNQNGQLGLGTSEDSLVPQKIQTF--QGVPIKMVAAGAEHSVAITEN 188

Query: 342 G 342
           G
Sbjct: 189 G 189



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 99/209 (47%), Gaps = 6/209 (2%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  H++ I+ N  ++  G    G LG G    + +   +++      +V V+    H
Sbjct: 175 VAAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRWIP-EKVSSVDCDKMVMVACGWRH 233

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V   G ++T G +     GH +    +  P+ ++AL      QV+ G   +  LT  
Sbjct: 234 TISVSSLGGLYTYGWSKYGQLGHGNFEDSLV-PQKLQALSDKLISQVSGGWRHSMALTST 292

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
           G ++  G N  GQ+G GD +DR +P  +  P ++   VVQI+ G  + +AVT    V+S+
Sbjct: 293 GLLYGWGWNKFGQVGVGDNVDRCSPVQVKFPHDQ--KVVQISCGWRHTIAVTEKENVFSW 350

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           G G+N  LGHG+  D   P+ I+     G
Sbjct: 351 GRGTNGQLGHGDTVDRNSPKIIEALSVDG 379



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/158 (30%), Positives = 74/158 (46%), Gaps = 3/158 (1%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + +  G  HT+ +S+   +++ G S  G LGHG      V   ++   S   + QVS   
Sbjct: 225 VMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGNFEDSLVP-QKLQALSDKLISQVSGGW 283

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  +G ++  G N     G  D N     P  V+        Q++ G   T  +T
Sbjct: 284 RHSMALTSTGLLYGWGWNKFGQVGVGD-NVDRCSPVQVKFPHDQKVVQISCGWRHTIAVT 342

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 270
            + +V + G  T+GQLGHGDT+DR +PK I  L   GS
Sbjct: 343 EKENVFSWGRGTNGQLGHGDTVDRNSPKIIEALSVDGS 380


>gi|410975285|ref|XP_003994063.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like, partial
           [Felis catus]
          Length = 621

 Score = 88.6 bits (218), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 120/252 (47%), Gaps = 10/252 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL-RTQKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYV 344
           H  A + SSG +
Sbjct: 305 HTSAFVPSSGRI 316



 Score = 80.9 bits (198), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDIQI-----VQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342



 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 107/226 (47%), Gaps = 7/226 (3%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGV 263



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 96/213 (45%), Gaps = 9/213 (4%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G +   +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQAS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           P+ I++    GI  ++V+AG  H   L  SG +
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAI 211


>gi|73952408|ref|XP_536160.2| PREDICTED: E3 ubiquitin-protein ligase HERC2 isoform 1 [Canis lupus
            familiaris]
          Length = 4837

 Score = 88.6 bits (218), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 118/251 (47%), Gaps = 12/251 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4033 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4086

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4087 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4145

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 V   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4146 HRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4204

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4205 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4262

Query: 334  HVVALDSSGYV 344
            H V     G V
Sbjct: 4263 HCVCCTEDGEV 4273



 Score = 88.2 bits (217), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 72/228 (31%), Positives = 107/228 (46%), Gaps = 7/228 (3%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3057 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3115

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3116 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3174

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3175 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3233

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G V
Sbjct: 3234 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDAGQV 3279



 Score = 88.2 bits (217), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 110/237 (46%), Gaps = 17/237 (7%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 169
           + G ++  L +   V+S G    G LGHG       P+     S  +    +  HVV ++
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AGKHVVHIA 558

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G     
Sbjct: 559 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQ 617

Query: 230 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
            L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSIALTKD 676

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V
Sbjct: 677 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEV 731



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/221 (31%), Positives = 110/221 (49%), Gaps = 12/221 (5%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFT 186
             V++CG +  G LG G  ++  V   R     +++VV+   V +   HA  +   G+VF+
Sbjct: 3013 KVYACGEATNGRLGLG-LSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3071

Query: 187  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
             G+      GH  +     +PRL+EALK    + +  G + +  LT  G ++T G   +G
Sbjct: 3072 WGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 3130

Query: 247  QLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGH 303
            +LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG 
Sbjct: 3131 RLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGR 3188

Query: 304  GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            G       P+ I+  R  G  V ++  G +  +AL  SG V
Sbjct: 3189 GGSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVV 3227



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 91/190 (47%), Gaps = 11/190 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2991 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPI--PRQITALSSYVV 3048

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L +   +  IA 
Sbjct: 3049 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL-KTKRIRDIAC 3107

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3108 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3165

Query: 335  VVALDSSGYV 344
             +AL   G V
Sbjct: 3166 TLALTDEGLV 3175



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/187 (31%), Positives = 94/187 (50%), Gaps = 20/187 (10%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 502

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 620

Query: 338 LDSSGYV 344
           +  +G V
Sbjct: 621 VTENGQV 627



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 99/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3105 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3163

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3164 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3222

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 3223 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDAGQVYA 3281

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3282 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3324



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 77/162 (47%), Gaps = 5/162 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3019

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3020 ATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3079

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG
Sbjct: 3080 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSG 3119



 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 82/177 (46%), Gaps = 5/177 (2%)

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA--FV 178
           Y   + +   +++ G    G LGHG    + +            V+ V+     A    V
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAV 621

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
            ++GQV++ GD      G R  +     P+L+E L+ +   +V  G  F+  LT  G V+
Sbjct: 622 TENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 680

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
           + G   + +LGHG       PK +  L+    V+ +AAG ++ LA+T +  V+S+GS
Sbjct: 681 SWGKGDNQRLGHGTEEHVRYPKLLEGLQG-KKVIDVAAGSTHCLALTEDSEVHSWGS 736



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4155 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4213

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4214 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4272

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4273 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4318



 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 671

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 731 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 776



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122  HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 3165 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 3223

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SG V+T G    F  GH  ++  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 3224 SGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAW 3282

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 3283 GDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 3326



 Score = 47.8 bits (112), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 67/137 (48%), Gaps = 3/137 (2%)

Query: 207  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            P   EAL  +   Q+  G      +T  G ++  G    G+LG G T    TP  +  ++
Sbjct: 3979 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQ 4038

Query: 267  EVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
             V    V + +G  + LA++  G VYS+G   +  LGHG +    +PR I++ R  GI V
Sbjct: 4039 HVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLR--GIEV 4096

Query: 326  VRVSAGDEHVVALDSSG 342
            V V+AG  H   + ++G
Sbjct: 4097 VDVAAGGAHSACVTAAG 4113



 Score = 41.2 bits (95), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 7/113 (6%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3955 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4010

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G V
Sbjct: 4011 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4063


>gi|149689922|ref|XP_001503631.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Equus caballus]
          Length = 1049

 Score = 88.6 bits (218), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 120/252 (47%), Gaps = 10/252 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDYKKQASPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYFPNLLKSL-RTQKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYV 344
           H  A + SSG +
Sbjct: 305 HTSAFVPSSGRI 316



 Score = 81.6 bits (200), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIVQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGIDYKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   F P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDRYF-PNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 107/226 (47%), Gaps = 7/226 (3%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLHDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDYKKQASPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V
Sbjct: 220 GQLGLNDENDRYFPNLLKSLRTQKI--VYICCGEDHTAALTKEGGV 263



 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 96/213 (45%), Gaps = 9/213 (4%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLHDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G +   +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDYKKQAS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           P+ I++    GI  ++V+AG  H   L  SG +
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAI 211


>gi|281344276|gb|EFB19860.1| hypothetical protein PANDA_001439 [Ailuropoda melanoleuca]
          Length = 993

 Score = 88.6 bits (218), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 72/221 (32%), Positives = 108/221 (48%), Gaps = 5/221 (2%)

Query: 99  SVEHSS-DIVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR 156
           S+EH+    +      +QI  G YH+L +S    +F+ G +L G LG G       +   
Sbjct: 93  SIEHARFQCILQEKSIIQIACGDYHSLALSKGGELFAWGQNLHGQLGVGRLFASIPTPQA 152

Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
           +   S   +VQ+SA + H+  +  SG V++ G N     G   T+   F P L+E L   
Sbjct: 153 VEHLSGVPLVQISAGKAHSMALSMSGNVYSWGRNDLGQLGLGHTDGEDF-PSLIETLDNQ 211

Query: 217 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
             + +  G + T  LT  G V T G+  +GQLGH  T +   P+ +  L     V QIA 
Sbjct: 212 QVEFLACGGSHTALLTTDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAG-NRVTQIAC 270

Query: 277 GPSYMLA-VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
           G  + LA V+  G V+SFGSG    LG+G  H++L P  ++
Sbjct: 271 GRRHTLAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMK 311



 Score = 80.9 bits (198), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 54/173 (31%), Positives = 89/173 (51%), Gaps = 3/173 (1%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           ++Q++  + H+  + + G++F  G N     G       I  P+ VE L GVP  Q++AG
Sbjct: 108 IIQIACGDYHSLALSKGGELFAWGQNLHGQLGVGRLFASIPTPQAVEHLSGVPLVQISAG 167

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
              +  L++ G+V++ G N  GQLG G T     P  I  L+    V  +A G S+   +
Sbjct: 168 KAHSMALSMSGNVYSWGRNDLGQLGLGHTDGEDFPSLIETLDN-QQVEFLACGGSHTALL 226

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           T +G+V++FG+G    LGH    +EL+PR +      G  V +++ G  H +A
Sbjct: 227 TTDGLVFTFGAGKYGQLGHNSTQNELRPRLVTEL--AGNRVTQIACGRRHTLA 277



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 56/111 (50%), Gaps = 4/111 (3%)

Query: 235 GHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
           G +   G N HGQLG G      PTP+++  L  V  +VQI+AG ++ +A++ +G VYS+
Sbjct: 125 GELFAWGQNLHGQLGVGRLFASIPTPQAVEHLSGV-PLVQISAGKAHSMALSMSGNVYSW 183

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G      LG G    E  P  I+T   + +    ++ G  H   L + G V
Sbjct: 184 GRNDLGQLGLGHTDGEDFPSLIETLDNQQVEF--LACGGSHTALLTTDGLV 232


>gi|426231471|ref|XP_004009762.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Ovis aries]
          Length = 963

 Score = 88.6 bits (218), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 76/231 (32%), Positives = 112/231 (48%), Gaps = 11/231 (4%)

Query: 92  RVLRFLQSVEHSS-DIVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETT 149
           +   +  S+EH+    +      +QIT G YH+L +S    +F+ G +L G LG G    
Sbjct: 132 KPFEYKYSIEHARFQCILQEKNIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFA 191

Query: 150 QCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR--P 207
              +   +   S   +VQ+SA E H+  +  SG V++ G N    CG         +  P
Sbjct: 192 STSTPEIVENLSGVPLVQISAGEAHSMALSMSGNVYSWGRND---CGQLGLGHTYNKDSP 248

Query: 208 RLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE 267
             +EAL     + +  G + T  LT  G V T G   +GQLGH  T +   P  +A L  
Sbjct: 249 SCIEALDDQKVEFLACGGSHTALLTKSGLVFTFGDGKYGQLGHNSTQNELRPCLVAGL-- 306

Query: 268 VGS-VVQIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
           VG+ V QIA G  + LA V+  G V+SFGSG    LG+G   ++L PR ++
Sbjct: 307 VGNRVTQIACGRQHTLAYVSDMGKVFSFGSGKEGQLGNGGTCNQLMPRPMK 357



 Score = 81.6 bits (200), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 52/174 (29%), Positives = 92/174 (52%), Gaps = 3/174 (1%)

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
           +++Q++  + H+  + + G++F  G N     G          P +VE L GVP  Q++A
Sbjct: 153 NIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISA 212

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G   +  L++ G+V++ G N  GQLG G T ++ +P  I  L++   V  +A G S+   
Sbjct: 213 GEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKDSPSCIEALDD-QKVEFLACGGSHTAL 271

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           +T +G+V++FG G    LGH    +EL+P  +      G  V +++ G +H +A
Sbjct: 272 LTKSGLVFTFGDGKYGQLGHNSTQNELRPCLVAGL--VGNRVTQIACGRQHTLA 323


>gi|301787735|ref|XP_002929284.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like
            [Ailuropoda melanoleuca]
          Length = 4837

 Score = 88.6 bits (218), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 118/251 (47%), Gaps = 12/251 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4033 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4086

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4087 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4145

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 V   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4146 HRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4204

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4205 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4262

Query: 334  HVVALDSSGYV 344
            H V     G V
Sbjct: 4263 HCVCCTEDGEV 4273



 Score = 88.2 bits (217), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 72/228 (31%), Positives = 107/228 (46%), Gaps = 7/228 (3%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3057 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3115

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3116 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3174

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3175 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3233

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G V
Sbjct: 3234 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDAGQV 3279



 Score = 88.2 bits (217), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 110/237 (46%), Gaps = 17/237 (7%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 169
           + G ++  L +   V+S G    G LGHG       P+     S  +    +  HVV ++
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AGKHVVHIA 558

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G     
Sbjct: 559 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQ 617

Query: 230 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
            L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSIALTKD 676

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V
Sbjct: 677 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEV 731



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/221 (31%), Positives = 110/221 (49%), Gaps = 12/221 (5%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFT 186
             V++CG +  G LG G  ++  V   R     +++VV+   V +   HA  +   G+VF+
Sbjct: 3013 KVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3071

Query: 187  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
             G+      GH  +     +PRL+EALK    + +  G + +  LT  G ++T G   +G
Sbjct: 3072 WGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 3130

Query: 247  QLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGH 303
            +LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG 
Sbjct: 3131 RLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGR 3188

Query: 304  GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            G       P+ I+  R  G  V ++  G +  +AL  SG V
Sbjct: 3189 GGSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVV 3227



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/187 (31%), Positives = 94/187 (50%), Gaps = 20/187 (10%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIIKIAAH 502

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 620

Query: 338 LDSSGYV 344
           +  +G V
Sbjct: 621 VTENGQV 627



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 91/190 (47%), Gaps = 11/190 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2991 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3048

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L +   +  IA 
Sbjct: 3049 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL-KTKRIRDIAC 3107

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3108 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3165

Query: 335  VVALDSSGYV 344
             +AL   G V
Sbjct: 3166 TLALTDEGLV 3175



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 99/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3105 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3163

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3164 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3222

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 3223 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDAGQVYA 3281

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3282 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3324



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 77/162 (47%), Gaps = 5/162 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3019

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3020 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3079

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG
Sbjct: 3080 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSG 3119



 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 82/177 (46%), Gaps = 5/177 (2%)

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA--FV 178
           Y   + +   +++ G    G LGHG    + +            V+ V+     A    V
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAV 621

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
            ++GQV++ GD      G R  +     P+L+E L+ +   +V  G  F+  LT  G V+
Sbjct: 622 TENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 680

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
           + G   + +LGHG       PK +  L+    V+ +AAG ++ LA+T +  V+S+GS
Sbjct: 681 SWGKGDNQRLGHGTEEHVRYPKLLEGLQG-KKVIDVAAGSTHCLALTEDSEVHSWGS 736



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4155 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4213

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4214 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4272

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4273 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4318



 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 671

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 731 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 776



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122  HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 3165 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 3223

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SG V+T G    F  GH  ++  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 3224 SGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAW 3282

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 3283 GDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 3326



 Score = 47.8 bits (112), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 67/137 (48%), Gaps = 3/137 (2%)

Query: 207  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            P   EAL  +   Q+  G      +T  G ++  G    G+LG G T    TP  +  ++
Sbjct: 3979 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQ 4038

Query: 267  EVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
             V    V + +G  + LA++  G VYS+G   +  LGHG +    +PR I++ R  GI V
Sbjct: 4039 HVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLR--GIEV 4096

Query: 326  VRVSAGDEHVVALDSSG 342
            V V+AG  H   + ++G
Sbjct: 4097 VDVAAGGAHSACVTAAG 4113



 Score = 41.2 bits (95), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 7/113 (6%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3955 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4010

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G V
Sbjct: 4011 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4063


>gi|355562563|gb|EHH19157.1| hypothetical protein EGK_19807 [Macaca mulatta]
          Length = 1054

 Score = 88.6 bits (218), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 75/252 (29%), Positives = 120/252 (47%), Gaps = 10/252 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   ++QV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYV 344
           H  A + SSG +
Sbjct: 305 HTSAFVPSSGRI 316



 Score = 80.9 bits (198), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIIQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342



 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 107/226 (47%), Gaps = 7/226 (3%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGV 263



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 95/213 (44%), Gaps = 9/213 (4%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
                 P++I  L ++  ++Q+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           P+ I++    GI  ++V+AG  H   L  SG +
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAI 211


>gi|348676412|gb|EGZ16230.1| hypothetical protein PHYSODRAFT_445559 [Phytophthora sojae]
          Length = 2434

 Score = 88.6 bits (218), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 70/229 (30%), Positives = 103/229 (44%), Gaps = 26/229 (11%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +  V+SCG +  G LGHG +T    SF RI       ++Q+ A   H   +   G+V TC
Sbjct: 432 DREVWSCGQNSYGELGHG-DTASRKSFERIESLQQKEIIQIGAGNEHTIALTVDGKVLTC 490

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVP------CKQVTA--GLNFTGFLTIRGHVHT 239
           G N +  CG   T R       V  L  +P        QV A  G   T  +T+ G   T
Sbjct: 491 GYNDNGQCGQGGTAR-------VSHLCEMPKMGDNAISQVHAYNGCEHTILVTMDGRAAT 543

Query: 240 CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV------TGNGVVYSF 293
           CG N  GQLGHG+T     PK +  LE    +V++ +   Y   +      +G   +Y+F
Sbjct: 544 CGYNYRGQLGHGNTASESVPKIVRSLE--NRIVRLVSCSYYHTVMACEEDGSGQQYLYTF 601

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           G      LGH +  D   P+ ++    +  HVV V+ G  H + + ++G
Sbjct: 602 GRNDYGQLGHNDSIDRKVPQHVEAMGDQ--HVVSVACGQYHTMVVTATG 648



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/239 (26%), Positives = 97/239 (40%), Gaps = 28/239 (11%)

Query: 121 YHTLLISNSS------VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           YHT++           +++ G +  G LGH     + V    +      HVV V+  + H
Sbjct: 582 YHTVMACEEDGSGQQYLYTFGRNDYGQLGHNDSIDRKVP-QHVEAMGDQHVVSVACGQYH 640

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V  +G+ F  G N     G       +   ++   L+   C ++  G   T  L   
Sbjct: 641 TMVVTATGKAFAFGKNDYGQLGIDSMENQLVPVQVRAGLEKHECLEIRCGYYHTIVLCSG 700

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE---------------EVGSVVQIAAGPS 279
            H+   G N +GQLG G    R    S A L+               E   +V+ A G  
Sbjct: 701 AHLFAFGRNDYGQLGLG----RANASSTANLQLQQQRFSYARLIEELEGKDIVRFACGCY 756

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           + +AV+ NGV+Y FG  ++  LG G+ ++ + P  I  F   G  V  V+AG  H V L
Sbjct: 757 HTVAVSDNGVMYVFGRNNHGQLGTGDTNERVYPFPIDDF--VGKRVALVAAGFYHTVVL 813



 Score = 41.2 bits (95), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 46/185 (24%), Positives = 76/185 (41%), Gaps = 17/185 (9%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G+YHT++++ +   F+ G +  G LG      Q V             +++     H
Sbjct: 634 VACGQYHTMVVTATGKAFAFGKNDYGQLGIDSMENQLVPVQVRAGLEKHECLEIRCGYYH 693

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTN-----------RPIFRPRLVEALKGVPCKQVTA 223
              +     +F  G N     G    N           +     RL+E L+G    +   
Sbjct: 694 TIVLCSGAHLFAFGRNDYGQLGLGRANASSTANLQLQQQRFSYARLIEELEGKDIVRFAC 753

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE-VGS-VVQIAAGPSYM 281
           G   T  ++  G ++  G N HGQLG GDT +R  P    P+++ VG  V  +AAG  + 
Sbjct: 754 GCYHTVAVSDNGVMYVFGRNNHGQLGTGDTNERVYP---FPIDDFVGKRVALVAAGFYHT 810

Query: 282 LAVTG 286
           + +TG
Sbjct: 811 VVLTG 815


>gi|357520083|ref|XP_003630330.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355524352|gb|AET04806.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
          Length = 279

 Score = 88.6 bits (218), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 69/231 (29%), Positives = 117/231 (50%), Gaps = 8/231 (3%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + I+ G  HT+ L++ + V S G    G LGHG +T   +  T+++      +V V+   
Sbjct: 15  LLISAGASHTVALLTGNVVCSWGRGEDGQLGHG-DTDDRLLPTKLSAFDGQDIVSVTCGA 73

Query: 173 NHAAFVLQSGQ-VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           ++     +SG+ V++ G       GH D +  +F P  + AL+G+  KQ++ G      +
Sbjct: 74  DYTVARSKSGKDVYSWGWGDFGRLGHGDPS-DLFIPHPIRALQGLRIKQISCGDCHCLAV 132

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           T+   V + G N +G+LG G T D   P+ I   E +  +  +AAG  + +A+T +G +Y
Sbjct: 133 TMENKVLSWGRNQNGELGLGTTKDSHVPQKILAFEGI-RIKMVAAGAEHSVAITEDGDLY 191

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            +G G    LG G+ +D L P  +      G  +V VS G  H +++ SSG
Sbjct: 192 GWGWGRYGNLGLGDTNDRLIPEKVNI---DGDKIVMVSCGWRHTISISSSG 239



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/183 (33%), Positives = 86/183 (46%), Gaps = 5/183 (2%)

Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
           S  HV+ +SA  +H   +L    V + G       GH DT+  +  P  + A  G     
Sbjct: 10  SPPHVLLISAGASHTVALLTGNVVCSWGRGEDGQLGHGDTDDRLL-PTKLSAFDGQDIVS 68

Query: 221 VTAGLNFTGFLTIRGH-VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
           VT G ++T   +  G  V++ G    G+LGHGD  D   P  I  L+ +  + QI+ G  
Sbjct: 69  VTCGADYTVARSKSGKDVYSWGWGDFGRLGHGDPSDLFIPHPIRALQGL-RIKQISCGDC 127

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
           + LAVT    V S+G   N  LG G   D   P+ I  F  +GI +  V+AG EH VA+ 
Sbjct: 128 HCLAVTMENKVLSWGRNQNGELGLGTTKDSHVPQKILAF--EGIRIKMVAAGAEHSVAIT 185

Query: 340 SSG 342
             G
Sbjct: 186 EDG 188



 Score = 71.6 bits (174), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 59/215 (27%), Positives = 98/215 (45%), Gaps = 6/215 (2%)

Query: 114 MQITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS 171
           + +T G  +T+  S S   V+S G    G LGHG  +   +    I       + Q+S  
Sbjct: 67  VSVTCGADYTVARSKSGKDVYSWGWGDFGRLGHGDPSDLFIPHP-IRALQGLRIKQISCG 125

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           + H   V    +V + G N +   G   T +    P+ + A +G+  K V AG   +  +
Sbjct: 126 DCHCLAVTMENKVLSWGRNQNGELG-LGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAI 184

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           T  G ++  G   +G LG GDT DR  P+ +    +   +V ++ G  + ++++ +G +Y
Sbjct: 185 TEDGDLYGWGWGRYGNLGLGDTNDRLIPEKVNI--DGDKIVMVSCGWRHTISISSSGGLY 242

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
           + G      LGHG+  D L PR +Q    K I  V
Sbjct: 243 THGWSKYGQLGHGDFEDCLVPRKVQALSDKLISQV 277


>gi|402880677|ref|XP_003903924.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Papio anubis]
          Length = 1057

 Score = 88.6 bits (218), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 75/252 (29%), Positives = 120/252 (47%), Gaps = 10/252 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   ++QV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYV 344
           H  A + SSG +
Sbjct: 305 HTSAFVPSSGRI 316



 Score = 80.9 bits (198), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIIQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 107/226 (47%), Gaps = 7/226 (3%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGV 263



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 95/213 (44%), Gaps = 9/213 (4%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
                 P++I  L ++  ++Q+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           P+ I++    GI  ++V+AG  H   L  SG +
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAI 211


>gi|301755906|ref|XP_002913789.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Ailuropoda melanoleuca]
          Length = 1049

 Score = 88.6 bits (218), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 120/252 (47%), Gaps = 10/252 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL-RTQKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYV 344
           H  A + SSG +
Sbjct: 305 HTSAFVPSSGRI 316



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 107/226 (47%), Gaps = 7/226 (3%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGV 263



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIVQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 96/213 (45%), Gaps = 9/213 (4%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G +   +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQAS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           P+ I++    GI  ++V+AG  H   L  SG +
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAI 211


>gi|73952739|ref|XP_849808.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Canis lupus familiaris]
          Length = 1057

 Score = 88.6 bits (218), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 120/252 (47%), Gaps = 10/252 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL-RTQKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYV 344
           H  A + SSG +
Sbjct: 305 HTSAFVPSSGRI 316



 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 107/226 (47%), Gaps = 7/226 (3%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGV 263



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIVQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 96/213 (45%), Gaps = 9/213 (4%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G +   +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQAS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           P+ I++    GI  ++V+AG  H   L  SG +
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAI 211


>gi|291404283|ref|XP_002718505.1| PREDICTED: hect domain and RLD 4 isoform 2 [Oryctolagus cuniculus]
          Length = 1049

 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 120/252 (47%), Gaps = 10/252 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYV 344
           H  A + SSG +
Sbjct: 305 HTSAFVPSSGRI 316



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIVQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342



 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 107/226 (47%), Gaps = 7/226 (3%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGV 263



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 96/213 (45%), Gaps = 9/213 (4%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G +   +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           P+ I++    GI  ++V+AG  H   L  SG +
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAI 211


>gi|449270678|gb|EMC81335.1| putative E3 ubiquitin-protein ligase HERC5, partial [Columba livia]
          Length = 314

 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 54/159 (33%), Positives = 84/159 (52%), Gaps = 3/159 (1%)

Query: 178 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
           V + G++FT G N+    G    N  I +P+LVE LKG+P  Q+ AG      +++ G V
Sbjct: 2   VCEGGELFTWGQNAHGQLGVSSQNALIPKPQLVERLKGIPLAQIAAGGAHNVAVSLSGAV 61

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           ++ G N  GQLG G T DR  P  I  LE   +V  ++ G  +   ++  G+V +FG+G 
Sbjct: 62  YSWGKNDFGQLGLGHTRDRGCPSYIKALEHWKTVF-VSCGADHTAVLSKEGLVCTFGAGG 120

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
           +  LGH    +EL PR +      G  V +++ G +H +
Sbjct: 121 SGQLGHNSTRNELVPRLVAELW--GARVSQIACGRQHTL 157



 Score = 45.4 bits (106), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 67/154 (43%), Gaps = 11/154 (7%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQ-CVSFTRINFPSAAHVVQVSASE 172
           QI  G  H + +S S +V+S G +  G LG G    + C S+  I        V VS   
Sbjct: 44  QIAAGGAHNVAVSLSGAVYSWGKNDFGQLGLGHTRDRGCPSY--IKALEHWKTVFVSCGA 101

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFL 231
           +H A + + G V T G   S   GH  T   +  PRLV  L G    Q+  G   T  ++
Sbjct: 102 DHTAVLSKEGLVCTFGAGGSGQLGHNSTRNELV-PRLVAELWGARVSQIACGRQHTLVYV 160

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 265
                V + GS+  GQLG     D+  P  + PL
Sbjct: 161 PSLDTVFSFGSDEEGQLG-----DKRKPNQLIPL 189


>gi|383411601|gb|AFH29014.1| putative E3 ubiquitin-protein ligase HERC4 isoform b [Macaca
           mulatta]
          Length = 1049

 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 75/252 (29%), Positives = 120/252 (47%), Gaps = 10/252 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   ++QV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYV 344
           H  A + SSG +
Sbjct: 305 HTSAFVPSSGRI 316



 Score = 80.9 bits (198), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIIQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 107/226 (47%), Gaps = 7/226 (3%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGV 263



 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 95/213 (44%), Gaps = 9/213 (4%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
                 P++I  L ++  ++Q+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           P+ I++    GI  ++V+AG  H   L  SG +
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAI 211


>gi|402880675|ref|XP_003903923.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Papio anubis]
          Length = 1049

 Score = 88.2 bits (217), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 75/252 (29%), Positives = 120/252 (47%), Gaps = 10/252 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   ++QV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYV 344
           H  A + SSG +
Sbjct: 305 HTSAFVPSSGRI 316



 Score = 80.9 bits (198), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIIQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 107/226 (47%), Gaps = 7/226 (3%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGV 263



 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 95/213 (44%), Gaps = 9/213 (4%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
                 P++I  L ++  ++Q+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           P+ I++    GI  ++V+AG  H   L  SG +
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAI 211


>gi|148700104|gb|EDL32051.1| hect domain and RLD 4, isoform CRA_a [Mus musculus]
          Length = 546

 Score = 88.2 bits (217), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 77/252 (30%), Positives = 119/252 (47%), Gaps = 10/252 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLG-HGPETTQCVSF 154
           +S +    +V   A N+  +  G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ-KIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +V+ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQ 304

Query: 334 HVVA-LDSSGYV 344
           H  A + SSG +
Sbjct: 305 HTSAFVPSSGRI 316



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/226 (25%), Positives = 108/226 (47%), Gaps = 7/226 (3%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V V+  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVACGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G + +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCQKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             LG  +++D   P  +++ R +   +V +  G++H  AL   G V
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQ--KIVYICCGEDHTAALTKEGGV 263



 Score = 79.0 bits (193), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 70/229 (30%), Positives = 109/229 (47%), Gaps = 11/229 (4%)

Query: 91  KRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETT 149
           +  +R  ++++  SDI       +Q+  G YH+L +S +S VF  G +  G LG G +  
Sbjct: 122 EECIRVPRNIKSLSDIQI-----VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQ 176

Query: 150 QCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRL 209
           +  S   I        +QV+A   H+  +  SG +F  G N     G  D N   + P L
Sbjct: 177 KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNL 235

Query: 210 VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 269
           +++L+      +  G + T  LT  G V T G+  +GQLGH  T     P+ +   E +G
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMG 293

Query: 270 SVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
           S+V Q+A G  +  A V  +G +YSFG G N  LG G   +   P  ++
Sbjct: 294 SIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 64.7 bits (156), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 86/191 (45%), Gaps = 8/191 (4%)

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           R +F     V  V     H  FVL  G V+TCG N     GH  + +   +P  V AL  
Sbjct: 27  RSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDA 83

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGDTLDRPTPKSIAPLEEVGSVVQI 274
                V  G   T  L  +G V+  G ++ GQLG  G       P++I  L ++  +VQ+
Sbjct: 84  QNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDI-QIVQV 142

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           A G  + LA++    V+ +G      LG G +   +  P+ I++    GI  ++V+AG  
Sbjct: 143 ACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLL--GIPFMQVAAGGA 200

Query: 334 HVVALDSSGYV 344
           H   L  SG +
Sbjct: 201 HSFVLTLSGAI 211



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 71/142 (50%), Gaps = 6/142 (4%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG-HGEQHDELQPRAIQTFRRKG 322
            L +  ++V +A G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  AL-DAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSD-- 136

Query: 323 IHVVRVSAGDEHVVALDSSGYV 344
           I +V+V+ G  H +AL  +  V
Sbjct: 137 IQIVQVACGYYHSLALSKASEV 158


>gi|195432783|ref|XP_002064396.1| GK20144 [Drosophila willistoni]
 gi|194160481|gb|EDW75382.1| GK20144 [Drosophila willistoni]
          Length = 4996

 Score = 88.2 bits (217), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 74/229 (32%), Positives = 107/229 (46%), Gaps = 9/229 (3%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAF 177
            G++   L  +  VFS G    G LGHG  TT  +   R +    A  +  V+   +H+A 
Sbjct: 3123 GKHALALTLDGKVFSWGEGEDGKLGHGNRTT--LDKPRLVEALRAKKIRDVACGSSHSAA 3180

Query: 178  VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRG 235
            +   G+++T G       GH D N    +P+ V AL G    QV  G     T  LT  G
Sbjct: 3181 ISSQGELYTWGLGEYGRLGHGD-NATQLKPKQVTALAGRRVIQVACGSRDAQTLALTEDG 3239

Query: 236  HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
             V + G    G+LG G +    TP  I  L  +G V+QI  G  + LA+T  G V+++G 
Sbjct: 3240 AVFSWGDGDFGKLGRGGSEGSATPHEIERLSGIG-VIQIECGAQFSLALTRAGEVWTWGK 3298

Query: 296  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            G  + LGHG      +P+ I   R  G  V+ V+ G  H +A+  +G V
Sbjct: 3299 GDYYRLGHGGDQHVRKPQPIGGLR--GRRVIHVAVGALHCLAVTDAGQV 3345



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 73/239 (30%), Positives = 112/239 (46%), Gaps = 16/239 (6%)

Query: 114  MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP----SAAHVVQV 168
            + I+ G     ++S +  VF+CG    G LG G   T  V       P         V V
Sbjct: 3063 IHISGGSKSLFIVSQDGKVFACGEGTNGRLGLG--VTHNVPLPH-QLPVLHQYVVKKVAV 3119

Query: 169  SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNF 227
             +   HA  +   G+VF+ G+      GH   NR    +PRLVEAL+    + V  G + 
Sbjct: 3120 HSGGKHALALTLDGKVFSWGEGEDGKLGH--GNRTTLDKPRLVEALRAKKIRDVACGSSH 3177

Query: 228  TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG--PSYMLAVT 285
            +  ++ +G ++T G   +G+LGHGD   +  PK +  L     V+Q+A G   +  LA+T
Sbjct: 3178 SAAISSQGELYTWGLGEYGRLGHGDNATQLKPKQVTALAGR-RVIQVACGSRDAQTLALT 3236

Query: 286  GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             +G V+S+G G    LG G       P  I+  R  GI V+++  G +  +AL  +G V
Sbjct: 3237 EDGAVFSWGDGDFGKLGRGGSEGSATPHEIE--RLSGIGVIQIECGAQFSLALTRAGEV 3293



 Score = 77.4 bits (189), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 56/181 (30%), Positives = 88/181 (48%), Gaps = 6/181 (3%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAG 224
            V V++   H   +   G+V+  G+      GH   NR  + RP+LVE L G+    +  G
Sbjct: 4236 VAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH--GNRMSYDRPKLVEHLNGMSVADIACG 4293

Query: 225  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLA 283
               +  +T  GHV T G   +G+LGHGD+ D+  PK +  L    ++ +   +G +  L 
Sbjct: 4294 SAHSAAITSSGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLC 4353

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I++    G+ V++V  G +  VAL  SG 
Sbjct: 4354 ITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESL--AGLGVIKVECGSQFSVALTKSGA 4411

Query: 344  V 344
            V
Sbjct: 4412 V 4412



 Score = 70.9 bits (172), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 50/162 (30%), Positives = 87/162 (53%), Gaps = 9/162 (5%)

Query: 185 FTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           ++ G       GH DT+ R +  P  + AL     K V  G +++  +T  G+++T G  
Sbjct: 637 YSWGAGEDHRLGHGDTHARAV--PTKISALDRC-VKAVFCGCSYSAAITWSGNLYTWGRG 693

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
           T+G+LGHG++ D+  P  +  L E   + V + +G ++ L +T  G+VY++G G    LG
Sbjct: 694 TYGRLGHGNSDDQCVPAIVMALAEYEIIDVALGSGDAHSLCLTSEGLVYAWGDGDYGKLG 753

Query: 303 HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           +G  +  LQP  ++T  R    V R+ AG +  +AL + G++
Sbjct: 754 NGNCNSSLQPILVETLPR----VQRIFAGAQSSMALTTEGHL 791



 Score = 68.2 bits (165), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 73/284 (25%), Positives = 111/284 (39%), Gaps = 66/284 (23%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSAS 171
            + +G  H L L +   V++ G    G LGHG      +S+ R   +   +   V  ++  
Sbjct: 4238 VNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNR----MSYDRPKLVEHLNGMSVADIACG 4293

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG---------------- 215
              H+A +  SG V T G       GH D+   + RP+LVEAL G                
Sbjct: 4294 SAHSAAITSSGHVLTWGKGRYGRLGHGDSEDQL-RPKLVEALLGYRAIDIACGSGDAQTL 4352

Query: 216  ----------------------------VPCK----------QVTAGLNFTGFLTIRGHV 237
                                        +P K          +V  G  F+  LT  G V
Sbjct: 4353 CITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAV 4412

Query: 238  HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            +T G     +LGHG       PK +A L+    ++ IA G  + +A +  G VY++G   
Sbjct: 4413 YTWGKGDFHRLGHGSVDHVRRPKKVAALQG-KKIISIATGSLHCVACSDAGEVYTWGDND 4471

Query: 298  NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
               LG G      +PR +     +G H+V+V+ G  H +AL +S
Sbjct: 4472 EGQLGDGTVTAIQRPRLVAAL--QGKHIVKVTCGSAHTLALSTS 4513



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 80/183 (43%), Gaps = 15/183 (8%)

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
            V Q++ SE+    + Q G+++ C              +P   P+ +E L       +  
Sbjct: 572 QVKQIACSESLLLLLSQDGKLYNC-----------RLGKPELEPQPIEELAQETILSIAG 620

Query: 224 GLNFTGFLTIRGH--VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
                 FL I  +   ++ G+    +LGHGDT  R  P  I+ L+    V  +  G SY 
Sbjct: 621 HCEGRHFLAIDSNRNAYSWGAGEDHRLGHGDTHARAVPTKISALDRC--VKAVFCGCSYS 678

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
            A+T +G +Y++G G+   LGHG   D+  P  +       I  V + +GD H + L S 
Sbjct: 679 AAITWSGNLYTWGRGTYGRLGHGNSDDQCVPAIVMALAEYEIIDVALGSGDAHSLCLTSE 738

Query: 342 GYV 344
           G V
Sbjct: 739 GLV 741



 Score = 65.1 bits (157), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 97/225 (43%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            +  G  H+  IS+   +++ G    G LGHG   TQ +   ++   +   V+QV+     
Sbjct: 3171 VACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQ-LKPKQVTALAGRRVIQVACGSRD 3229

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    + + G VF+ GD      G R  +     P  +E L G+   Q+  G  F+  LT
Sbjct: 3230 AQTLALTEDGAVFSWGDGDFGKLG-RGGSEGSATPHEIERLSGIGVIQIECGAQFSLALT 3288

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG       P+ I  L     V+ +A G  + LAVT  G VY+
Sbjct: 3289 RAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGR-RVIHVAVGALHCLAVTDAGQVYA 3347

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G G      +P  +       + V RV+ G  H +A
Sbjct: 3348 WGDNDHGQQGSGNTFVNKKPALVIGL--DAVFVNRVACGSSHSIA 3390



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 68/234 (29%), Positives = 110/234 (47%), Gaps = 20/234 (8%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           GR+   + SN + +S G+     LGHG    + V  T+I+      V  V    +++A +
Sbjct: 624 GRHFLAIDSNRNAYSWGAGEDHRLGHGDTHARAVP-TKISALDRC-VKAVFCGCSYSAAI 681

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIRGH 236
             SG ++T G  +    GH +++     P +V AL       V   +G   +  LT  G 
Sbjct: 682 TWSGNLYTWGRGTYGRLGHGNSDDQCV-PAIVMALAEYEIIDVALGSGDAHSLCLTSEGL 740

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           V+  G   +G+LG+G+        S+ P+  E +  V +I AG    +A+T  G +YS+G
Sbjct: 741 VYAWGDGDYGKLGNGN-----CNSSLQPILVETLPRVQRIFAGAQSSMALTTEGHLYSWG 795

Query: 295 SGSNFCLGHGEQHDELQ----PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             S  CLGH +    +Q    PR + + + K   +V V+ G  H +AL S G V
Sbjct: 796 KAS--CLGHQQVERSVQGCSVPRLVSSLQHK--RLVDVAVGVAHCLALTSCGEV 845



 Score = 47.8 bits (112), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 46/180 (25%), Positives = 85/180 (47%), Gaps = 13/180 (7%)

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV-VQVSASENHAAFVL 179
           Y   +  + ++++ G    G LGHG    QCV    +       + V + + + H+  + 
Sbjct: 677 YSAAITWSGNLYTWGRGTYGRLGHGNSDDQCVPAIVMALAEYEIIDVALGSGDAHSLCLT 736

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             G V+  GD      G+ + N  + +P LVE L  V  +++ AG   +  LT  GH+++
Sbjct: 737 SEGLVYAWGDGDYGKLGNGNCNSSL-QPILVETLPRV--QRIFAGAQSSMALTTEGHLYS 793

Query: 240 CGSNTHGQLGHGDTLDR-----PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
            G  +   LGH   ++R       P+ ++ L+    +V +A G ++ LA+T  G V+ +G
Sbjct: 794 WGKASC--LGH-QQVERSVQGCSVPRLVSSLQH-KRLVDVAVGVAHCLALTSCGEVFGWG 849


>gi|73952755|ref|XP_536367.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Canis lupus familiaris]
          Length = 1049

 Score = 88.2 bits (217), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 120/252 (47%), Gaps = 10/252 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL-RTQKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYV 344
           H  A + SSG +
Sbjct: 305 HTSAFVPSSGRI 316



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 107/226 (47%), Gaps = 7/226 (3%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGV 263



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIVQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 96/213 (45%), Gaps = 9/213 (4%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G +   +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQAS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           P+ I++    GI  ++V+AG  H   L  SG +
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAI 211


>gi|383872260|ref|NP_001244507.1| probable E3 ubiquitin-protein ligase HERC4 [Macaca mulatta]
 gi|355782894|gb|EHH64815.1| hypothetical protein EGM_18130 [Macaca fascicularis]
 gi|380786489|gb|AFE65120.1| putative E3 ubiquitin-protein ligase HERC4 isoform a [Macaca
           mulatta]
 gi|383411599|gb|AFH29013.1| putative E3 ubiquitin-protein ligase HERC4 isoform a [Macaca
           mulatta]
          Length = 1057

 Score = 88.2 bits (217), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 75/252 (29%), Positives = 120/252 (47%), Gaps = 10/252 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   ++QV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYV 344
           H  A + SSG +
Sbjct: 305 HTSAFVPSSGRI 316



 Score = 80.9 bits (198), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIIQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 107/226 (47%), Gaps = 7/226 (3%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGV 263



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 95/213 (44%), Gaps = 9/213 (4%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
                 P++I  L ++  ++Q+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           P+ I++    GI  ++V+AG  H   L  SG +
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAI 211


>gi|410903564|ref|XP_003965263.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
           [Takifugu rubripes]
          Length = 3883

 Score = 88.2 bits (217), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 70/234 (29%), Positives = 112/234 (47%), Gaps = 11/234 (4%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP--SAAHVVQVSASE 172
           I  G+Y T  +S + SV +CG    G LG G    Q +    +  P  +   V     S+
Sbjct: 417 IEAGQYCTFSVSTDGSVKACGKGSYGRLGLGDSNNQSLPKKLVLEPHRNIKKVSSSKGSD 476

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGFL 231
            H   +   G+VF+ GD      GH ++    + P++++  L        +AG   +  +
Sbjct: 477 GHTLAITVDGEVFSWGDGEYGKLGHGNSATQKY-PKIIQGPLFSKIVVSASAGYRHSAAV 535

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-VV 290
           T  G ++T G    G+LGH D+  R  P  +  +  VG   Q+A G S+ +AV  +G  V
Sbjct: 536 TKDGELYTWGEGDFGRLGHSDSQSRNMPTLVKDISGVG---QVACGSSHTIAVAQDGRTV 592

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           +SFG G N  LGHG+ +   +P+ I+     G  + +V AG +  +AL S+G V
Sbjct: 593 WSFGGGDNGKLGHGDTNRVYRPKVIEALH--GFIIRKVCAGSQSSLALTSAGQV 644



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 67/221 (30%), Positives = 103/221 (46%), Gaps = 6/221 (2%)

Query: 125  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
            L     VFS G    G LGHG    Q     +I       VVQ++    H+A V   G++
Sbjct: 3120 LTETGEVFSWGDGDFGKLGHGNNERQ-RRPKQIEALQGEDVVQLACGFRHSAVVTADGKL 3178

Query: 185  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHTCGSN 243
            FT G   S   G R T+  +  P  V AL+G    QV+ GLN T  L++ G  V   G  
Sbjct: 3179 FTFGSGESGRLGQRSTSNKML-PERVAALEGYHVGQVSCGLNHTLVLSLDGMAVWAFGDG 3237

Query: 244  THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 303
             +G+LG G +  +  P+ +  L   G + ++  G  + + V  +G VY+FG      L  
Sbjct: 3238 DYGKLGAGSSTAKYYPQKVEQLCNKG-MKKVCCGAQFSVVVACDGHVYTFGQERLIGLPD 3296

Query: 304  GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
                +   P+ + +   +G+ +  ++ G EHV+AL S+G V
Sbjct: 3297 SMLKNRSNPQVVPSL--EGLFIEDIAVGCEHVLALSSTGDV 3335



 Score = 77.8 bits (190), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 68/233 (29%), Positives = 108/233 (46%), Gaps = 6/233 (2%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS--AAHVVQVSAS 171
            Q+  G+  + LI SN  V + G    G LG G      V      F       +V    S
Sbjct: 3054 QVVCGQNCSFLIQSNGVVTAVGEGQYGRLGQGNSDDLYVPTIISAFQGYVVTQLVTSCGS 3113

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
            + H+  + ++G+VF+ GD      GH +  R   RP+ +EAL+G    Q+  G   +  +
Sbjct: 3114 DGHSMALTETGEVFSWGDGDFGKLGHGNNERQ-RRPKQIEALQGEDVVQLACGFRHSAVV 3172

Query: 232  TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV-V 290
            T  G + T GS   G+LG   T ++  P+ +A LE    V Q++ G ++ L ++ +G+ V
Sbjct: 3173 TADGKLFTFGSGESGRLGQRSTSNKMLPERVAALEGY-HVGQVSCGLNHTLVLSLDGMAV 3231

Query: 291  YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            ++FG G    LG G    +  P+ ++    KG+  V   A    VVA D   Y
Sbjct: 3232 WAFGDGDYGKLGAGSSTAKYYPQKVEQLCNKGMKKVCCGAQFSVVVACDGHVY 3284



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/258 (25%), Positives = 115/258 (44%), Gaps = 26/258 (10%)

Query: 87  NGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGP 146
           N   ++  + +Q    S  +V  SAG       R+   +  +  +++ G    G LGH  
Sbjct: 503 NSATQKYPKIIQGPLFSKIVVSASAGY------RHSAAVTKDGELYTWGEGDFGRLGHSD 556

Query: 147 ETTQCVSFTRINFPSAAH----VVQVSASENHAAFVLQSGQV---FTCGDNSSFCCGHRD 199
             ++       N P+       V QV+   +H   V Q G+    F  GDN     GH D
Sbjct: 557 SQSR-------NMPTLVKDISGVGQVACGSSHTIAVAQDGRTVWSFGGGDNGKL--GHGD 607

Query: 200 TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP 259
           TNR ++RP+++EAL G   ++V AG   +  LT  G V   G  +    G  +T     P
Sbjct: 608 TNR-VYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSCLGCGSSETTSL-RP 665

Query: 260 KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
           + +  L  +  ++ I+ G S+ LA++    VY++G+ +    G G     +  R  +   
Sbjct: 666 RFVEDLS-ITKIIDISCGDSHCLALSHENEVYAWGNNTMGQCGQGHTSTPIT-RPKKVLG 723

Query: 320 RKGIHVVRVSAGDEHVVA 337
            +G+ + +++AG  H +A
Sbjct: 724 LEGVSIQQITAGTSHSLA 741



 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/184 (32%), Positives = 85/184 (46%), Gaps = 7/184 (3%)

Query: 106 IVETSAGNMQITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA 163
           +V+  +G  Q+  G  HT+ ++    +V+S G    G LGHG +T +      I      
Sbjct: 565 LVKDISGVGQVACGSSHTIAVAQDGRTVWSFGGGDNGKLGHG-DTNRVYRPKVIEALHGF 623

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
            + +V A    +  +  +GQVF  G  S   CG  +T     RPR VE L       ++ 
Sbjct: 624 IIRKVCAGSQSSLALTSAGQVFAWGCGSCLGCGSSETTS--LRPRFVEDLSITKIIDISC 681

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYML 282
           G +    L+    V+  G+NT GQ G G T    T PK +  LE V S+ QI AG S+ L
Sbjct: 682 GDSHCLALSHENEVYAWGNNTMGQCGQGHTSTPITRPKKVLGLEGV-SIQQITAGTSHSL 740

Query: 283 AVTG 286
           A T 
Sbjct: 741 AWTA 744



 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 49/161 (30%), Positives = 72/161 (44%), Gaps = 6/161 (3%)

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           V+  G NSS       T   I  P+L +       + + AG   T  ++  G V  CG  
Sbjct: 383 VYVWGSNSSHQLAE-GTLEKILLPKLTQGFSDA--QTIEAGQYCTFSVSTDGSVKACGKG 439

Query: 244 THGQLGHGDTLDRPTPKSIA--PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 301
           ++G+LG GD+ ++  PK +   P   +  V        + LA+T +G V+S+G G    L
Sbjct: 440 SYGRLGLGDSNNQSLPKKLVLEPHRNIKKVSSSKGSDGHTLAITVDGEVFSWGDGEYGKL 499

Query: 302 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           GHG    +  P+ IQ      I VV  SAG  H  A+   G
Sbjct: 500 GHGNSATQKYPKIIQGPLFSKI-VVSASAGYRHSAAVTKDG 539



 Score = 51.2 bits (121), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 64/142 (45%), Gaps = 10/142 (7%)

Query: 203  PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
            P   P L +       +QV  G N +  +   G V   G   +G+LG G++ D   P  I
Sbjct: 3043 PTLAPSLSQT------QQVVCGQNCSFLIQSNGVVTAVGEGQYGRLGQGNSDDLYVPTII 3096

Query: 263  APLE--EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR 320
            +  +   V  +V       + +A+T  G V+S+G G    LGHG    + +P+ I+    
Sbjct: 3097 SAFQGYVVTQLVTSCGSDGHSMALTETGEVFSWGDGDFGKLGHGNNERQRRPKQIEAL-- 3154

Query: 321  KGIHVVRVSAGDEHVVALDSSG 342
            +G  VV+++ G  H   + + G
Sbjct: 3155 QGEDVVQLACGFRHSAVVTADG 3176



 Score = 40.4 bits (93), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 82/193 (42%), Gaps = 11/193 (5%)

Query: 115  QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            Q++ G  HTL++S    +V++ G    G LG G  T +     ++       + +V    
Sbjct: 3213 QVSCGLNHTLVLSLDGMAVWAFGDGDYGKLGAGSSTAKYYP-QKVEQLCNKGMKKVCCGA 3271

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGHRDT---NRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +  V   G V+T G       G  D+   NR    P++V +L+G+  + +  G     
Sbjct: 3272 QFSVVVACDGHVYTFGQERLI--GLPDSMLKNRS--NPQVVPSLEGLFIEDIAVGCEHVL 3327

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L+  G V+  G N+ GQLG G       P  I  L+   ++ QI+AG  +  A T    
Sbjct: 3328 ALSSTGDVYAWGCNSEGQLGLGHCNPVKEPTLITALQG-KNIKQISAGRCHSSAWTTPST 3386

Query: 290  VYSFGSGSNFCLG 302
              + G   N  LG
Sbjct: 3387 SKNSGGPGNLQLG 3399


>gi|296196028|ref|XP_002745648.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Callithrix jacchus]
          Length = 1024

 Score = 88.2 bits (217), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 69/205 (33%), Positives = 101/205 (49%), Gaps = 4/205 (1%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QIT G YH+L +S    +F+ G +L G LG G +     +   +   +   + Q+SA E
Sbjct: 141 IQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTAPQIVEHLAGIPLAQISAGE 200

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +++ G N     G  D       P L+EAL     + +  G + T  LT
Sbjct: 201 AHSMALSMSGNIYSWGKNEFGQLG-LDHTESKDSPSLIEALDNQKVEFLACGGSHTALLT 259

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA-VTGNGVVY 291
             G + T G+  HGQLGH  T +   P  +A L     V QIA G  + LA V+  G V+
Sbjct: 260 QDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELAG-NRVTQIACGRWHTLAYVSDLGKVF 318

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQ 316
           SFGSG    LG+G   D+L P  ++
Sbjct: 319 SFGSGKEGQLGNGGTRDQLIPLPMK 343



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 90/173 (52%), Gaps = 3/173 (1%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           ++Q++  + H+  + + G++F  G N     G          P++VE L G+P  Q++AG
Sbjct: 140 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTAPQIVEHLAGIPLAQISAG 199

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
              +  L++ G++++ G N  GQLG   T  + +P  I  L+    V  +A G S+   +
Sbjct: 200 EAHSMALSMSGNIYSWGKNEFGQLGLDHTESKDSPSLIEALDN-QKVEFLACGGSHTALL 258

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           T +G++++FG+G +  LGH    +EL+P  +      G  V +++ G  H +A
Sbjct: 259 TQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAEL--AGNRVTQIACGRWHTLA 309


>gi|291404281|ref|XP_002718504.1| PREDICTED: hect domain and RLD 4 isoform 1 [Oryctolagus cuniculus]
          Length = 1057

 Score = 88.2 bits (217), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 120/252 (47%), Gaps = 10/252 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYV 344
           H  A + SSG +
Sbjct: 305 HTSAFVPSSGRI 316



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIVQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342



 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 107/226 (47%), Gaps = 7/226 (3%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGV 263



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 96/213 (45%), Gaps = 9/213 (4%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G +   +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           P+ I++    GI  ++V+AG  H   L  SG +
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAI 211


>gi|301755904|ref|XP_002913788.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Ailuropoda melanoleuca]
 gi|281346973|gb|EFB22557.1| hypothetical protein PANDA_001627 [Ailuropoda melanoleuca]
          Length = 1057

 Score = 88.2 bits (217), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 120/252 (47%), Gaps = 10/252 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL-RTQKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYV 344
           H  A + SSG +
Sbjct: 305 HTSAFVPSSGRI 316



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 107/226 (47%), Gaps = 7/226 (3%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGV 263



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIVQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342



 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 96/213 (45%), Gaps = 9/213 (4%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G +   +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQAS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           P+ I++    GI  ++V+AG  H   L  SG +
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAI 211


>gi|119578073|gb|EAW57669.1| hCG2006901, isoform CRA_f [Homo sapiens]
          Length = 1319

 Score = 88.2 bits (217), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 118/251 (47%), Gaps = 12/251 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 835  LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 888

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 889  VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 947

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 948  HRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 1006

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 1007 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 1064

Query: 334  HVVALDSSGYV 344
            H V     G V
Sbjct: 1065 HCVCCTEDGEV 1075



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/142 (34%), Positives = 75/142 (52%), Gaps = 7/142 (4%)

Query: 206 RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 265
           +PRL+EALK    + +  G + +  LT  G ++T G   +G+LGHGD   +  PK +  L
Sbjct: 5   KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVL 64

Query: 266 EEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
             +G  V+Q+A G   +  LA+T  G+V+S+G G    LG G       P+ I+  R  G
Sbjct: 65  --LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIE--RLNG 120

Query: 323 IHVVRVSAGDEHVVALDSSGYV 344
             V ++  G +  +AL  SG V
Sbjct: 121 QGVCQIECGAQFSLALTKSGVV 142



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 957  SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 1015

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 1016 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 1074

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 1075 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 1120



 Score = 47.8 bits (112), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 67/137 (48%), Gaps = 3/137 (2%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P   EAL  +   Q+  G      +T  G ++  G    G+LG G T    TP  +  ++
Sbjct: 781 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQ 840

Query: 267 EVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
            V    V + +G  + LA++  G VYS+G   +  LGHG +    +PR I++ R  GI V
Sbjct: 841 HVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLR--GIEV 898

Query: 326 VRVSAGDEHVVALDSSG 342
           V V+AG  H   + ++G
Sbjct: 899 VDVAAGGAHSACVTAAG 915



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 52/179 (29%), Positives = 76/179 (42%), Gaps = 11/179 (6%)

Query: 115 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+    
Sbjct: 19  DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSR 77

Query: 174 HAA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  L
Sbjct: 78  DAQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 136

Query: 232 TIRG-----HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
           T  G      V+  G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 137 TKSGVVWTWQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQ-KITRVACGSSHSVAWT 194



 Score = 40.4 bits (93), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 7/113 (6%)

Query: 235 GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 757 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 812

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           + G G+   LG G       P  +++ +   I  V V++G +H +AL S G V
Sbjct: 813 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 865


>gi|426255642|ref|XP_004021457.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Ovis aries]
          Length = 979

 Score = 88.2 bits (217), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 75/252 (29%), Positives = 120/252 (47%), Gaps = 10/252 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  Q+ AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL-RTQKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYV 344
           H  A + SSG +
Sbjct: 305 HTSAFVPSSGRI 316



 Score = 80.9 bits (198), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 61/226 (26%), Positives = 107/226 (47%), Gaps = 7/226 (3%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +QIAAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGI-PFMQIAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGV 263



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIVQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   I        +Q++A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 96/213 (45%), Gaps = 9/213 (4%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G +   +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQAS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           P+ I++    GI  ++++AG  H   L  SG +
Sbjct: 181 PQLIKSLL--GIPFMQIAAGGAHSFVLTLSGAI 211


>gi|395820632|ref|XP_003783667.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Otolemur
           garnettii]
          Length = 1049

 Score = 88.2 bits (217), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 120/252 (47%), Gaps = 10/252 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCKKQTSPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 VGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYV 344
           H  A + SSG +
Sbjct: 305 HTSAFVPSSGRI 316



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIVQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGLDCKKQTSPQLIKSLVGIPFMQVAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342



 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 106/224 (47%), Gaps = 7/224 (3%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGLDCKKQTSPQLIKSLVGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
             LG  +++D   P  +++ R + I  V +  G++H  AL   G
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEG 261



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 96/213 (45%), Gaps = 9/213 (4%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G +   +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           P+ I++    GI  ++V+AG  H   L  SG +
Sbjct: 181 PQLIKSLV--GIPFMQVAAGGAHSFVLTLSGAI 211


>gi|330802866|ref|XP_003289433.1| hypothetical protein DICPUDRAFT_153832 [Dictyostelium purpureum]
 gi|325080475|gb|EGC34029.1| hypothetical protein DICPUDRAFT_153832 [Dictyostelium purpureum]
          Length = 1719

 Score = 88.2 bits (217), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 74/267 (27%), Positives = 125/267 (46%), Gaps = 45/267 (16%)

Query: 116 ITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRI----NFPSAAHVVQVSA 170
           I+TG  HT +I++   +++ G  L G LGHG  T +  S  R+        +  VV V+ 
Sbjct: 166 ISTGAIHTSIITDKGHLYTWGDGLLGKLGHG--TLESYSEPRLVEFFETKPSLRVVSVAN 223

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR-PRLV------------------- 210
              H   +   G V++ G N S   G  + +   +  P+LV                   
Sbjct: 224 GGKHTVALTVCGNVYSFGGNDSCQLGLGNISSSYYSTPQLVTFQSPQSLSNSNSSSPIIM 283

Query: 211 -EALKGVPCKQ-------------VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR 256
             +   +  KQ             ++   N +  ++  G+++T G   +G+LGHGD+L +
Sbjct: 284 SNSTSTLFNKQQQQSSNKIDRIIKLSCSTNRSAAISKLGYLYTWGRGDNGRLGHGDSLMQ 343

Query: 257 PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAI 315
            TPK +  L    ++V ++ G  + +A+T  G V+S+G G N  LGHG     ++ P+ I
Sbjct: 344 STPKQVMSLHG-HTIVDMSLGGGHSMALTKRGEVFSWGRGENGQLGHGTFTSQQMTPKQI 402

Query: 316 QTFRRKGIHVVRVSAGDEHVVALDSSG 342
           Q F+ K I V  +SAG  H +A+D++G
Sbjct: 403 QAFQNKTIKV--ISAGGYHSIAIDTNG 427



 Score = 54.7 bits (130), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 57/228 (25%), Positives = 95/228 (41%), Gaps = 41/228 (17%)

Query: 154 FTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
           + RI+F     VV +S    H + +   G ++T GD      GH  T      PRLVE  
Sbjct: 153 YERIDFLKE-KVVFISTGAIHTSIITDKGHLYTWGDGLLGKLGH-GTLESYSEPRLVEFF 210

Query: 214 KGVPCKQVTA---GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR--PTPK-------- 260
           +  P  +V +   G   T  LT+ G+V++ G N   QLG G+       TP+        
Sbjct: 211 ETKPSLRVVSVANGGKHTVALTVCGNVYSFGGNDSCQLGLGNISSSYYSTPQLVTFQSPQ 270

Query: 261 ---------------SIAPL---------EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
                          S + L          ++  +++++   +   A++  G +Y++G G
Sbjct: 271 SLSNSNSSSPIIMSNSTSTLFNKQQQQSSNKIDRIIKLSCSTNRSAAISKLGYLYTWGRG 330

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            N  LGHG+   +  P+ + +    G  +V +S G  H +AL   G V
Sbjct: 331 DNGRLGHGDSLMQSTPKQVMSLH--GHTIVDMSLGGGHSMALTKRGEV 376



 Score = 48.1 bits (113), Expect = 0.006,   Method: Composition-based stats.
 Identities = 45/200 (22%), Positives = 83/200 (41%), Gaps = 16/200 (8%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
           +++ G    G LGHG    Q      ++      +V +S    H+  + + G+VF+ G  
Sbjct: 324 LYTWGRGDNGRLGHGDSLMQSTPKQVMSL-HGHTIVDMSLGGGHSMALTKRGEVFSWGRG 382

Query: 191 SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH 250
            +   GH         P+ ++A +    K ++AG   +  +   G +   G   +G LG 
Sbjct: 383 ENGQLGHGTFTSQQMTPKQIQAFQNKTIKVISAGGYHSIAIDTNGSMFAWGRGDYGVLGV 442

Query: 251 GDTLDR----PTPKSIAPLEEVGS-----------VVQIAAGPSYMLAVTGNGVVYSFGS 295
             +LD      +P  I  L                 + +++G  + +A T NG +YS+G 
Sbjct: 443 SSSLDSLGDINSPVLIKSLNNSNGSNNSNSSAGERFINVSSGFQHNVAQTENGDLYSWGC 502

Query: 296 GSNFCLGHGEQHDELQPRAI 315
           GS   LG   + ++L P+ +
Sbjct: 503 GSGNRLGLANEENQLIPKKL 522


>gi|281354478|gb|EFB30062.1| hypothetical protein PANDA_019422 [Ailuropoda melanoleuca]
          Length = 4814

 Score = 88.2 bits (217), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 118/251 (47%), Gaps = 12/251 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4010 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4063

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4064 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4122

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 V   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4123 HRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4181

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4182 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4239

Query: 334  HVVALDSSGYV 344
            H V     G V
Sbjct: 4240 HCVCCTEDGEV 4250



 Score = 88.2 bits (217), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 72/228 (31%), Positives = 107/228 (46%), Gaps = 7/228 (3%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3034 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3092

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3093 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3151

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3152 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3210

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G V
Sbjct: 3211 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDAGQV 3256



 Score = 87.8 bits (216), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 110/237 (46%), Gaps = 17/237 (7%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 169
           + G ++  L +   V+S G    G LGHG       P+     S  +    +  HVV ++
Sbjct: 480 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AGKHVVHIA 535

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G     
Sbjct: 536 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQ 594

Query: 230 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
            L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +
Sbjct: 595 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSIALTKD 653

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V
Sbjct: 654 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEV 708



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/221 (31%), Positives = 110/221 (49%), Gaps = 12/221 (5%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFT 186
             V++CG +  G LG G  ++  V   R     +++VV+   V +   HA  +   G+VF+
Sbjct: 2990 KVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3048

Query: 187  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
             G+      GH  +     +PRL+EALK    + +  G + +  LT  G ++T G   +G
Sbjct: 3049 WGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 3107

Query: 247  QLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGH 303
            +LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG 
Sbjct: 3108 RLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGR 3165

Query: 304  GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            G       P+ I+  R  G  V ++  G +  +AL  SG V
Sbjct: 3166 GGSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVV 3204



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 91/190 (47%), Gaps = 11/190 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2968 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3025

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L +   +  IA 
Sbjct: 3026 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL-KTKRIRDIAC 3084

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3085 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3142

Query: 335  VVALDSSGYV 344
             +AL   G V
Sbjct: 3143 TLALTDEGLV 3152



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/187 (31%), Positives = 94/187 (50%), Gaps = 20/187 (10%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 431 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIIKIAAH 479

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 480 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 539

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 540 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 597

Query: 338 LDSSGYV 344
           +  +G V
Sbjct: 598 VTENGQV 604



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 99/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3082 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3140

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3141 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3199

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 3200 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDAGQVYA 3258

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3259 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3301



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 77/162 (47%), Gaps = 5/162 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2938 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 2996

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 2997 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3056

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG
Sbjct: 3057 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSG 3096



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 82/177 (46%), Gaps = 5/177 (2%)

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA--FV 178
           Y   + +   +++ G    G LGHG    + +            V+ V+     A    V
Sbjct: 540 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAV 598

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
            ++GQV++ GD      G R  +     P+L+E L+ +   +V  G  F+  LT  G V+
Sbjct: 599 TENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 657

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
           + G   + +LGHG       PK +  L+    V+ +AAG ++ LA+T +  V+S+GS
Sbjct: 658 SWGKGDNQRLGHGTEEHVRYPKLLEGLQG-KKVIDVAAGSTHCLALTEDSEVHSWGS 713



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4132 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4190

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4191 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4249

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4250 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4295



 Score = 55.1 bits (131), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 590 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 648

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 649 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 707

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 708 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 753



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122  HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 3142 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 3200

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SG V+T G    F  GH  ++  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 3201 SGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAW 3259

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 3260 GDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 3303



 Score = 47.8 bits (112), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 67/137 (48%), Gaps = 3/137 (2%)

Query: 207  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            P   EAL  +   Q+  G      +T  G ++  G    G+LG G T    TP  +  ++
Sbjct: 3956 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQ 4015

Query: 267  EVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
             V    V + +G  + LA++  G VYS+G   +  LGHG +    +PR I++ R  GI V
Sbjct: 4016 HVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLR--GIEV 4073

Query: 326  VRVSAGDEHVVALDSSG 342
            V V+AG  H   + ++G
Sbjct: 4074 VDVAAGGAHSACVTAAG 4090



 Score = 40.8 bits (94), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 7/113 (6%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3932 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 3987

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G V
Sbjct: 3988 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4040


>gi|195115491|ref|XP_002002290.1| GI17306 [Drosophila mojavensis]
 gi|193912865|gb|EDW11732.1| GI17306 [Drosophila mojavensis]
          Length = 486

 Score = 88.2 bits (217), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 65/226 (28%), Positives = 103/226 (45%), Gaps = 27/226 (11%)

Query: 122 HTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           HT+LI+ +      G +  G LG   +       T I      ++VQV+A  +H  F+  
Sbjct: 126 HTILINMDRKALGFGRNPSGQLGLSQDMKLVEKPTLIPALEQLNIVQVAAGRHHTLFLTD 185

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           +G V+ CG+N S  CG  + +  IF P  +   +G P  ++  G  F+  L I+G++HT 
Sbjct: 186 TGTVYACGENKSGQCGVGNAHPNIFTPTPIN-YRGPPIIRIGCGAEFSVILDIKGNLHTF 244

Query: 241 GSNTHGQLGHGDTLD------------RPTPKS------------IAPLEEVGSVVQIAA 276
           G   +GQLGH                   +PK             + P++ V  +V  A 
Sbjct: 245 GLPEYGQLGHNTDAKYFVNANKLSFHFETSPKKVVLYIEKSKEGHVTPVDGV-QIVDFAC 303

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           G ++ +A+     VYS+G G    LGH E  DE+ PR ++ F  +G
Sbjct: 304 GNNHTVAIDSKKRVYSWGFGGFGRLGHAEPKDEMVPRLMKFFDSQG 349



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/208 (25%), Positives = 86/208 (41%), Gaps = 35/208 (16%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 219
           P+AAH + ++       F          G N S   G     + + +P L+ AL+ +   
Sbjct: 122 PAAAHTILINMDRKALGF----------GRNPSGQLGLSQDMKLVEKPTLIPALEQLNIV 171

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGP 278
           QV AG + T FLT  G V+ CG N  GQ G G+    P   +  P+   G  +++I  G 
Sbjct: 172 QVAAGRHHTLFLTDTGTVYACGENKSGQCGVGNA--HPNIFTPTPINYRGPPIIRIGCGA 229

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQ------------HDELQPRAIQTFRRK----- 321
            + + +   G +++FG      LGH               H E  P+ +  +  K     
Sbjct: 230 EFSVILDIKGNLHTFGLPEYGQLGHNTDAKYFVNANKLSFHFETSPKKVVLYIEKSKEGH 289

Query: 322 -----GIHVVRVSAGDEHVVALDSSGYV 344
                G+ +V  + G+ H VA+DS   V
Sbjct: 290 VTPVDGVQIVDFACGNNHTVAIDSKKRV 317


>gi|428170458|gb|EKX39383.1| hypothetical protein GUITHDRAFT_89130 [Guillardia theta CCMP2712]
          Length = 396

 Score = 88.2 bits (217), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 72/267 (26%), Positives = 128/267 (47%), Gaps = 25/267 (9%)

Query: 89  NWK-RVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGP 146
           +W+ R +R L++V+            +QI  G  H++ +++ S VF+ G  L G LGHG 
Sbjct: 79  DWEPRWIRALETVK-----------VVQIAAGEDHSVALTDRSEVFTWGRGLHGQLGHGD 127

Query: 147 ETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPI-- 204
            +     F  +       +  +     +   +  +G+V   G  +S   G+ D +  I  
Sbjct: 128 VSDVWFPFL-VKGLQGKGIKSIGCGYENTFAITGTGKVLGFGSAASGKLGNGDVDGGIGG 186

Query: 205 --FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG----HGDTLDRPT 258
             + P  +++L      Q T G NF+ FL+  G +++ G   +GQLG      ++L+ P 
Sbjct: 187 NVYLPVQLKSLAKFTIIQATGGKNFSMFLSHTGQLYSVGYAANGQLGIPFEEVESLNLPY 246

Query: 259 PKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQT 317
             ++  +   G  V+ ++ G S+ LA++ +G+VYS+GSG N+ LGHG   D   P+ +  
Sbjct: 247 TGTMQEVSHKGVFVKYVSCGDSHSLALSEDGIVYSWGSGINWALGHGGTEDTFTPKMVAM 306

Query: 318 FRRKGIHVVRVSAGDEHVVALDSSGYV 344
                   V VSAG  H  A+ ++G +
Sbjct: 307 LEAD--PCVSVSAGGYHSAAVSATGRI 331



 Score = 81.6 bits (200), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 56/175 (32%), Positives = 82/175 (46%), Gaps = 1/175 (0%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
           V+SCG    G LG   E  +      +       V  ++    H   + ++G+V++ G N
Sbjct: 6   VYSCGHGAGGRLGLNDERARTAFTGPLGTLQDVEVKSLACGGKHNLLLSRAGKVYSWGYN 65

Query: 191 SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH 250
            S   GH   +   + PR + AL+ V   Q+ AG + +  LT R  V T G   HGQLGH
Sbjct: 66  DSRQTGHGVEDLSDWEPRWIRALETVKVVQIAAGEDHSVALTDRSEVFTWGRGLHGQLGH 125

Query: 251 GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
           GD  D   P  +  L+  G +  I  G     A+TG G V  FGS ++  LG+G+
Sbjct: 126 GDVSDVWFPFLVKGLQGKG-IKSIGCGYENTFAITGTGKVLGFGSAASGKLGNGD 179



 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/162 (30%), Positives = 76/162 (46%), Gaps = 4/162 (2%)

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           V++CG  +    G  D          +  L+ V  K +  G      L+  G V++ G N
Sbjct: 6   VYSCGHGAGGRLGLNDERARTAFTGPLGTLQDVEVKSLACGGKHNLLLSRAGKVYSWGYN 65

Query: 244 THGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
              Q GHG + L    P+ I  LE V  VVQIAAG  + +A+T    V+++G G +  LG
Sbjct: 66  DSRQTGHGVEDLSDWEPRWIRALETV-KVVQIAAGEDHSVALTDRSEVFTWGRGLHGQLG 124

Query: 303 HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           HG+  D   P  ++  + KGI    +  G E+  A+  +G V
Sbjct: 125 HGDVSDVWFPFLVKGLQGKGIK--SIGCGYENTFAITGTGKV 164



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 59/215 (27%), Positives = 97/215 (45%), Gaps = 11/215 (5%)

Query: 112 GNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVS--FTRINFPSAAH--VV 166
           G   I  G  +T  I+ +  V   GS+  G LG+G          +  +   S A   ++
Sbjct: 144 GIKSIGCGYENTFAITGTGKVLGFGSAASGKLGNGDVDGGIGGNVYLPVQLKSLAKFTII 203

Query: 167 QVSASENHAAFVLQSGQVFTCGDNSSFCCGH-----RDTNRPIFRPRLVEALKGVPCKQV 221
           Q +  +N + F+  +GQ+++ G  ++   G         N P        + KGV  K V
Sbjct: 204 QATGGKNFSMFLSHTGQLYSVGYAANGQLGIPFEEVESLNLPYTGTMQEVSHKGVFVKYV 263

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
           + G + +  L+  G V++ GS  +  LGHG T D  TPK +A LE     V ++AG  + 
Sbjct: 264 SCGDSHSLALSEDGIVYSWGSGINWALGHGGTEDTFTPKMVAMLE-ADPCVSVSAGGYHS 322

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
            AV+  G +Y++G      LG G+  D+     +Q
Sbjct: 323 AAVSATGRIYTWGRNFVGQLGTGQNIDDHSADHVQ 357



 Score = 54.3 bits (129), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 76/158 (48%), Gaps = 7/158 (4%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRIN-FPSAAH----VVQ 167
           +Q T G+  ++ +S++  ++S G +  G LG   E  + ++          +H    V  
Sbjct: 203 IQATGGKNFSMFLSHTGQLYSVGYAANGQLGIPFEEVESLNLPYTGTMQEVSHKGVFVKY 262

Query: 168 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
           VS  ++H+  + + G V++ G   ++  GH  T    F P++V  L+  PC  V+AG   
Sbjct: 263 VSCGDSHSLALSEDGIVYSWGSGINWALGHGGT-EDTFTPKMVAMLEADPCVSVSAGGYH 321

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 265
           +  ++  G ++T G N  GQLG G  +D  +   +  L
Sbjct: 322 SAAVSATGRIYTWGRNFVGQLGTGQNIDDHSADHVQRL 359


>gi|145597074|ref|YP_001161371.1| hypothetical protein Strop_4565 [Salinispora tropica CNB-440]
 gi|145306411|gb|ABP56993.1| hypothetical protein Strop_4565 [Salinispora tropica CNB-440]
          Length = 477

 Score = 88.2 bits (217), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 68/228 (29%), Positives = 109/228 (47%), Gaps = 6/228 (2%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G  H+L ++++ +  + G++L G LG G  TT   +   ++ P+   V  ++A ++H
Sbjct: 110 IAAGHDHSLAVTSAGTALAWGNNLFGQLGDG-STTDSSTPIAVDLPAGTTVTAIAAGDDH 168

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           +  V  +G     GDN     G   T R    P  V+   G     + AG+  +  LT  
Sbjct: 169 SLAVTSAGTALAWGDNDRGELGDGTTTR-RDTPVDVDLPAGTTVTAIAAGIGHSLALTSA 227

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G V T G N+ GQLG G T D  TP ++  L    +V  IAAG  + LAVT  G + ++G
Sbjct: 228 GTVLTWGLNSDGQLGDGTTTDSSTPIAVD-LPAGTTVTAIAAGSLHSLAVTTAGTILAWG 286

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           + S+  LG G   +   P A+         +  +  G +H +A+ S+G
Sbjct: 287 NNSDGQLGDGTTTNSSTPIAVN--LPASTTITAIDGGRDHSLAVTSAG 332



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 86/202 (42%), Gaps = 4/202 (1%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G  H+L L S  +V + G +  G LG G  TT   +   ++ P+   V  ++A   H
Sbjct: 214 IAAGIGHSLALTSAGTVLTWGLNSDGQLGDG-TTTDSSTPIAVDLPAGTTVTAIAAGSLH 272

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           +  V  +G +   G+NS    G   T      P  V          +  G + +  +T  
Sbjct: 273 SLAVTTAGTILAWGNNSDGQLGDGTTTNS-STPIAVNLPASTTITAIDGGRDHSLAVTSA 331

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G     G N  GQLG G T +  TP ++  L    +V    AG  + LAVT  G + ++G
Sbjct: 332 GSALAWGDNDDGQLGDGTTTNSSTPIAVN-LPADTTVTATTAGSLHSLAVTTAGTILAWG 390

Query: 295 SGSNFCLGHGEQHDELQPRAIQ 316
           + S+  LG G   +   P A+ 
Sbjct: 391 NNSDGRLGDGTTTNSSTPIAVN 412



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 71/167 (42%), Gaps = 10/167 (5%)

Query: 181 SGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
           S  V   GDN     G     D++ PI     V+   G     + AG + +  +T  G  
Sbjct: 71  SDTVLAWGDNKDGELGDGTTTDSSTPIA----VDLPAGTTITAIAAGHDHSLAVTSAGTA 126

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
              G+N  GQLG G T D  TP ++  L    +V  IAAG  + LAVT  G   ++G   
Sbjct: 127 LAWGNNLFGQLGDGSTTDSSTPIAVD-LPAGTTVTAIAAGDDHSLAVTSAGTALAWGDND 185

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              LG G       P  +      G  V  ++AG  H +AL S+G V
Sbjct: 186 RGELGDGTTTRRDTP--VDVDLPAGTTVTAIAAGIGHSLALTSAGTV 230


>gi|410960764|ref|XP_003986957.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like isoform 2 [Felis
            catus]
          Length = 4844

 Score = 88.2 bits (217), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 72/228 (31%), Positives = 107/228 (46%), Gaps = 7/228 (3%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3064 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3122

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3123 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3181

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3182 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3240

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G V
Sbjct: 3241 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDAGQV 3286



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 118/251 (47%), Gaps = 12/251 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4040 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4093

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4094 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4152

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 V   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4153 HHVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4211

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4212 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4269

Query: 334  HVVALDSSGYV 344
            H V     G V
Sbjct: 4270 HCVCCTEDGEV 4280



 Score = 87.4 bits (215), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 110/237 (46%), Gaps = 17/237 (7%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 169
           + G ++  L +   V+S G    G LGHG       P+     S  +    +  HVV ++
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AGKHVVHIA 558

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G     
Sbjct: 559 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PVLVAGLKGLKVIDVACGSGDAQ 617

Query: 230 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
            L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSIALTKD 676

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V
Sbjct: 677 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEV 731



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/221 (31%), Positives = 110/221 (49%), Gaps = 12/221 (5%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFT 186
             V++CG +  G LG G  ++  V   R     +++VV+   V +   HA  +   G+VF+
Sbjct: 3020 KVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3078

Query: 187  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
             G+      GH  +     +PRL+EALK    + +  G + +  LT  G ++T G   +G
Sbjct: 3079 WGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 3137

Query: 247  QLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGH 303
            +LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG 
Sbjct: 3138 RLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGR 3195

Query: 304  GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            G       P+ I+  R  G  V ++  G +  +AL  SG V
Sbjct: 3196 GGSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVV 3234



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 91/190 (47%), Gaps = 11/190 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2998 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3055

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L +   +  IA 
Sbjct: 3056 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL-KTKRIRDIAC 3114

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3115 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3172

Query: 335  VVALDSSGYV 344
             +AL   G V
Sbjct: 3173 TLALTDEGLV 3182



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/187 (31%), Positives = 94/187 (50%), Gaps = 20/187 (10%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 502

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPVLVAGL--KGLKVIDVACGSGDAQTLA 620

Query: 338 LDSSGYV 344
           +  +G V
Sbjct: 621 VTENGQV 627



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 99/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3112 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3170

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3171 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3229

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 3230 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDAGQVYA 3288

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3289 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3331



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 77/162 (47%), Gaps = 5/162 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2968 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3026

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3027 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3086

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG
Sbjct: 3087 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSG 3126



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 82/177 (46%), Gaps = 5/177 (2%)

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA--FV 178
           Y   + +   +++ G    G LGHG    + +            V+ V+     A    V
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPVLVAGL-KGLKVIDVACGSGDAQTLAV 621

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
            ++GQV++ GD      G R  +     P+L+E L+ +   +V  G  F+  LT  G V+
Sbjct: 622 TENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 680

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
           + G   + +LGHG       PK +  L+    V+ +AAG ++ LA+T +  V+S+GS
Sbjct: 681 SWGKGDNQRLGHGTEEHVRYPKLLEGLQG-KKVIDVAAGSTHCLALTEDSEVHSWGS 736



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4162 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4220

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4221 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4279

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4280 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4325



 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 671

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 731 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 776



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122  HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 3172 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 3230

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SG V+T G    F  GH  ++  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 3231 SGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAW 3289

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 3290 GDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 3333



 Score = 47.8 bits (112), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 67/137 (48%), Gaps = 3/137 (2%)

Query: 207  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            P   EAL  +   Q+  G      +T  G ++  G    G+LG G T    TP  +  ++
Sbjct: 3986 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQ 4045

Query: 267  EVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
             V    V + +G  + LA++  G VYS+G   +  LGHG +    +PR I++ R  GI V
Sbjct: 4046 HVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLR--GIEV 4103

Query: 326  VRVSAGDEHVVALDSSG 342
            V V+AG  H   + ++G
Sbjct: 4104 VDVAAGGAHSACVTAAG 4120



 Score = 41.2 bits (95), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 7/113 (6%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3962 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4017

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G V
Sbjct: 4018 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4070


>gi|410960762|ref|XP_003986956.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like isoform 1 [Felis
            catus]
          Length = 4837

 Score = 88.2 bits (217), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 72/228 (31%), Positives = 107/228 (46%), Gaps = 7/228 (3%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3057 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3115

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3116 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3174

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3175 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3233

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G V
Sbjct: 3234 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDAGQV 3279



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 118/251 (47%), Gaps = 12/251 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4033 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4086

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4087 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4145

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 V   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4146 HHVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4204

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4205 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4262

Query: 334  HVVALDSSGYV 344
            H V     G V
Sbjct: 4263 HCVCCTEDGEV 4273



 Score = 87.4 bits (215), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 110/237 (46%), Gaps = 17/237 (7%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 169
           + G ++  L +   V+S G    G LGHG       P+     S  +    +  HVV ++
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AGKHVVHIA 558

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G     
Sbjct: 559 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PVLVAGLKGLKVIDVACGSGDAQ 617

Query: 230 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
            L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSIALTKD 676

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V
Sbjct: 677 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEV 731



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/221 (31%), Positives = 110/221 (49%), Gaps = 12/221 (5%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFT 186
             V++CG +  G LG G  ++  V   R     +++VV+   V +   HA  +   G+VF+
Sbjct: 3013 KVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3071

Query: 187  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
             G+      GH  +     +PRL+EALK    + +  G + +  LT  G ++T G   +G
Sbjct: 3072 WGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 3130

Query: 247  QLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGH 303
            +LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG 
Sbjct: 3131 RLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGR 3188

Query: 304  GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            G       P+ I+  R  G  V ++  G +  +AL  SG V
Sbjct: 3189 GGSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVV 3227



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 91/190 (47%), Gaps = 11/190 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2991 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3048

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L +   +  IA 
Sbjct: 3049 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL-KTKRIRDIAC 3107

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3108 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3165

Query: 335  VVALDSSGYV 344
             +AL   G V
Sbjct: 3166 TLALTDEGLV 3175



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/187 (31%), Positives = 94/187 (50%), Gaps = 20/187 (10%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 502

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPVLVAGL--KGLKVIDVACGSGDAQTLA 620

Query: 338 LDSSGYV 344
           +  +G V
Sbjct: 621 VTENGQV 627



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 99/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3105 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3163

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3164 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3222

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 3223 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDAGQVYA 3281

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3282 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3324



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 77/162 (47%), Gaps = 5/162 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3019

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3020 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3079

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG
Sbjct: 3080 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSG 3119



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 82/177 (46%), Gaps = 5/177 (2%)

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA--FV 178
           Y   + +   +++ G    G LGHG    + +            V+ V+     A    V
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPVLVAGL-KGLKVIDVACGSGDAQTLAV 621

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
            ++GQV++ GD      G R  +     P+L+E L+ +   +V  G  F+  LT  G V+
Sbjct: 622 TENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 680

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
           + G   + +LGHG       PK +  L+    V+ +AAG ++ LA+T +  V+S+GS
Sbjct: 681 SWGKGDNQRLGHGTEEHVRYPKLLEGLQG-KKVIDVAAGSTHCLALTEDSEVHSWGS 736



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4155 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4213

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4214 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4272

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4273 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4318



 Score = 55.1 bits (131), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 671

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 731 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 776



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122  HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 3165 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 3223

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SG V+T G    F  GH  ++  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 3224 SGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAW 3282

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 3283 GDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 3326



 Score = 47.8 bits (112), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 67/137 (48%), Gaps = 3/137 (2%)

Query: 207  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            P   EAL  +   Q+  G      +T  G ++  G    G+LG G T    TP  +  ++
Sbjct: 3979 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQ 4038

Query: 267  EVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
             V    V + +G  + LA++  G VYS+G   +  LGHG +    +PR I++ R  GI V
Sbjct: 4039 HVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLR--GIEV 4096

Query: 326  VRVSAGDEHVVALDSSG 342
            V V+AG  H   + ++G
Sbjct: 4097 VDVAAGGAHSACVTAAG 4113



 Score = 40.8 bits (94), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 7/113 (6%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3955 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4010

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G V
Sbjct: 4011 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4063


>gi|194206384|ref|XP_001917973.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase HERC2
            [Equus caballus]
          Length = 4840

 Score = 88.2 bits (217), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 72/228 (31%), Positives = 107/228 (46%), Gaps = 7/228 (3%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3060 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3118

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3119 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3177

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3178 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3236

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G V
Sbjct: 3237 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDAGQV 3282



 Score = 87.4 bits (215), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 110/237 (46%), Gaps = 17/237 (7%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 169
           + G ++  L +   V+S G    G LGHG       P+     S  +    +  HVV ++
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AGKHVVHIA 558

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G     
Sbjct: 559 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAV-PMLVAGLKGLKVIDVACGSGDAQ 617

Query: 230 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
            L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSIALTKD 676

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V
Sbjct: 677 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEV 731



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 118/251 (47%), Gaps = 12/251 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4036 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4089

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       +V V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4090 VIESLRGIELVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4148

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 V   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4149 HRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4207

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4208 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4265

Query: 334  HVVALDSSGYV 344
            H V     G V
Sbjct: 4266 HCVCCTEDGEV 4276



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/221 (31%), Positives = 110/221 (49%), Gaps = 12/221 (5%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFT 186
             V++CG +  G LG G  ++  V   R     +++VV+   V +   HA  +   G+VF+
Sbjct: 3016 KVYACGEATNGRLGLGI-SSGTVPIPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFS 3074

Query: 187  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
             G+      GH  +     +PRL+EALK    + +  G + +  LT  G ++T G   +G
Sbjct: 3075 WGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 3133

Query: 247  QLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGH 303
            +LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG 
Sbjct: 3134 RLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGR 3191

Query: 304  GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            G       P+ I+  R  G  V ++  G +  +AL  SG V
Sbjct: 3192 GGSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVV 3230



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 73/249 (29%), Positives = 113/249 (45%), Gaps = 16/249 (6%)

Query: 102  HSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS 161
            +S  ++   A  + I  G +    +   +V S GS  C   G G    +  SF+     S
Sbjct: 2940 NSGSLIRKKAAGLGIQRGPWTPFGVGQGAV-STGSLCCD--GVGLSQIKVPSFSETL--S 2994

Query: 162  AAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPCK 219
            A +VVQV+        V   G+V+ CG+  N     G      PI  PR V AL     K
Sbjct: 2995 ALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQVTALSSYVVK 3052

Query: 220  QVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG 277
            +V   +G      LT+ G V + G    G+LGH   ++   P+ I  L +   +  IA G
Sbjct: 3053 KVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL-KTKRIRDIACG 3111

Query: 278  PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHV 335
             S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D   
Sbjct: 3112 SSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQT 3169

Query: 336  VALDSSGYV 344
            +AL   G V
Sbjct: 3170 LALTDEGLV 3178



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/187 (31%), Positives = 94/187 (50%), Gaps = 20/187 (10%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 502

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAVPMLVAGL--KGLKVIDVACGSGDAQTLA 620

Query: 338 LDSSGYV 344
           +  +G V
Sbjct: 621 VTENGQV 627



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 99/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3108 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3166

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3167 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3225

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 3226 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDAGQVYA 3284

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3285 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3327



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 58/228 (25%), Positives = 99/228 (43%), Gaps = 7/228 (3%)

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA--FV 178
           Y   + +   +++ G    G LGHG    + V            V+ V+     A    V
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAVPMLVAGL-KGLKVIDVACGSGDAQTLAV 621

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
            ++GQV++ GD      G R  +     P+L+E L+ +   +V  G  F+  LT  G V+
Sbjct: 622 TENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 680

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           + G   + +LGHG       PK +  L+    V+ +AAG ++ LA+T +  V+S+GS   
Sbjct: 681 SWGKGDNQRLGHGTEEHVRYPKLLEGLQG-KKVIDVAAGSTHCLALTEDSEVHSWGSNDQ 739

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSL 346
                  +  + +P A+     K  H+V ++ G     A  S    S+
Sbjct: 740 CQHFDTLRVTKPEPSALPGLDTK--HIVGIACGPAQSFAWSSCSEWSI 785



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4158 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4216

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4217 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4275

Query: 237  VHTCGSNTHGQLGHGDT--LDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T  + RP    + P  +   V ++A G ++ LA
Sbjct: 4276 VYTWGDNDEGQLGDGTTNAIQRP---RLVPALQGKKVNRVACGSAHTLA 4321



 Score = 55.1 bits (131), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 671

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 731 VHSWGSNDQCQ--HFDTLRVTKPEPSALPGL-DTKHIVGIACGPAQSFA 776



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122  HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 3168 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 3226

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SG V+T G    F  GH  ++  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 3227 SGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAW 3285

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 3286 GDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 3329



 Score = 46.6 bits (109), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 67/137 (48%), Gaps = 3/137 (2%)

Query: 207  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            P   EAL  +   Q+  G      +T  G ++  G    G+LG G T    TP  +  ++
Sbjct: 3982 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQ 4041

Query: 267  EVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
             V    V + +G  + LA++  G VYS+G   +  LGHG +    +PR I++ R  GI +
Sbjct: 4042 HVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLR--GIEL 4099

Query: 326  VRVSAGDEHVVALDSSG 342
            V V+AG  H   + ++G
Sbjct: 4100 VDVAAGGAHSACVTAAG 4116



 Score = 40.8 bits (94), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 7/113 (6%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3958 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4013

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G V
Sbjct: 4014 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4066


>gi|115304951|gb|AAI23843.1| Hect domain and RLD 4 [Bos taurus]
          Length = 853

 Score = 88.2 bits (217), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 75/252 (29%), Positives = 120/252 (47%), Gaps = 10/252 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  Q+ AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL-RTQKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYV 344
           H  A + SSG +
Sbjct: 305 HTSAFVPSSGRI 316



 Score = 80.9 bits (198), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 61/226 (26%), Positives = 107/226 (47%), Gaps = 7/226 (3%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +QIAAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGI-PFMQIAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGV 263



 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIVQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   I        +Q++A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342



 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 96/213 (45%), Gaps = 9/213 (4%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G +   +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQAS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           P+ I++    GI  ++++AG  H   L  SG +
Sbjct: 181 PQLIKSLL--GIPFMQIAAGGAHSFVLTLSGAI 211


>gi|374296377|ref|YP_005046568.1| RCC1 domain-containing protein, alpha-tubulin suppressor
           [Clostridium clariflavum DSM 19732]
 gi|359825871|gb|AEV68644.1| RCC1 domain-containing protein, alpha-tubulin suppressor
           [Clostridium clariflavum DSM 19732]
          Length = 819

 Score = 88.2 bits (217), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 101/217 (46%), Gaps = 10/217 (4%)

Query: 107 VETSAGNMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPET---TQCVSFTRINFPSA 162
           +E   G   ++ G+ H L + +   V+S G+S  G LG G +T   +   +F        
Sbjct: 560 IEGLEGVTDVSVGKNHILALKDDGYVYSAGNSYWGQLGDGSQTHHNSYSETFNLTKAKGL 619

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            ++V V+A   H+  +   G V+T G N      H +    +  P   E L+ + C  ++
Sbjct: 620 TNIVAVAAGSEHSVALKNDGTVWTWGSNQFGELAHGNDTFSL-EPMQAEGLENI-C-AIS 676

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
           AG N+   L   G V   G NT+GQLG+G T     P  +  LE   ++V+I AG     
Sbjct: 677 AGNNYNLALKEDGTVWAWGDNTYGQLGNGSTYKTNVPVQVDGLE---NIVKIIAGRDSSF 733

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
           A+T +G V+++G  +   LG G   + L P  I  F+
Sbjct: 734 AITKDGDVWAWGKNNCGQLGDGTTQNRLTPVKIDAFK 770



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 63/231 (27%), Positives = 103/231 (44%), Gaps = 20/231 (8%)

Query: 115 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRI--NFPSAAHVVQVSAS 171
           QI+ G  H L L  + +V+  G+   G LG+G       SF RI     S   V  V A 
Sbjct: 264 QISAGDEHVLALDKDKNVWGWGAGDKGQLGNGT----AASFLRIPEKLSSFTEVKSVKAG 319

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
              +A + + G ++  GDN+    G+ R+ N    + + +  +K V   Q  A       
Sbjct: 320 TMVSAAIKEDGTLWIWGDNTYGIMGNSRNINSSPVQRKDISGIKAVELNQYCAAA----- 374

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           L   G V T G N +G LG G  LD   P  ++     G V  I+ G ++M  +  +G +
Sbjct: 375 LKNDGTVWTWGKNINGILGLGTALDSQIPSVVSG---TGDVEVISCGKTHMAIIKSDGTL 431

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           +++G      LG+G      +P  I        ++ ++S G +HV+A+D +
Sbjct: 432 WTWGYNIYGQLGNGNVDYITEPVTINGIS----NISKISCGGKHVLAIDEN 478



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 80/297 (26%), Positives = 131/297 (44%), Gaps = 38/297 (12%)

Query: 65  CALHSIYA-GMSRNVQIE------------LLNRCNGNWKRVLRFLQSVEHSSDIVETSA 111
           CAL  +Y  GM ++ ++E            L+N  +  + + +      E     +E   
Sbjct: 53  CALMKMYLLGMIKSFEVEDELYAADVNGDTLINSVDFAYMKKMLLGMITEFPKKSME--- 109

Query: 112 GNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRI--NFPSAAHVVQV 168
           G +Q+  G YHT+ L  + +V++ G +  G LG G    +     RI         V++V
Sbjct: 110 GFVQVACGEYHTIALKKDGTVWTWGYNSYGQLGLG----EAGEIERIPKKIEGLEDVIKV 165

Query: 169 SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
           +A   H+  + + G V+  G N     G  ++N     P  V+ L GV  K + AG  F+
Sbjct: 166 AAGSRHSLALKKDGTVWAWGYNYYGQLGD-ESNIRRNTPVQVKGLTGV--KDIDAGDFFS 222

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG--SVVQIAAGPSYMLAVTG 286
             L   G V   G N  GQ+G G  ++     S  PL+ VG  ++ QI+AG  ++LA+  
Sbjct: 223 VALRDDGTVWGWGYNYKGQIGCGTGIN-----SNVPLQTVGVSNITQISAGDEHVLALDK 277

Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           +  V+ +G+G    LG+G     L+ P  + +F      V  V AG     A+   G
Sbjct: 278 DKNVWGWGAGDKGQLGNGTAASFLRIPEKLSSFT----EVKSVKAGTMVSAAIKEDG 330



 Score = 50.8 bits (120), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 44/168 (26%), Positives = 74/168 (44%), Gaps = 21/168 (12%)

Query: 101 EHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP 160
           E   +I   SAGN       Y+  L  + +V++ G +  G LG+G      V    +   
Sbjct: 667 EGLENICAISAGN------NYNLALKEDGTVWAWGDNTYGQLGNGSTYKTNVP---VQVD 717

Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH--RDTNRPIFRPRLVEALKGVPC 218
              ++V++ A  + +  + + G V+  G N+   CG     T +    P  ++A KG  C
Sbjct: 718 GLENIVKIIAGRDSSFAITKDGDVWAWGKNN---CGQLGDGTTQNRLTPVKIDAFKG--C 772

Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           K + +G++FT  L   G V   GSN  G +  G      + +S  P+E
Sbjct: 773 KSIVSGMDFTMVLMNDGTVIGVGSNVSGVMTLG-----FSDRSFIPIE 815


>gi|350593460|ref|XP_003133446.3| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Sus
            scrofa]
          Length = 4060

 Score = 88.2 bits (217), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 72/228 (31%), Positives = 107/228 (46%), Gaps = 7/228 (3%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 2281 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 2339

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 2340 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 2398

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 2399 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 2457

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G V
Sbjct: 2458 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDAGQV 2503



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 75/249 (30%), Positives = 117/249 (46%), Gaps = 12/249 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 3257 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 3310

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LV+AL+G
Sbjct: 3311 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVDALQG 3369

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 V   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 3370 HRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 3428

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 3429 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 3486

Query: 334  HVVALDSSG 342
            H V     G
Sbjct: 3487 HCVCCTEDG 3495



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/181 (31%), Positives = 92/181 (50%), Gaps = 6/181 (3%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 3269 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 3327

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV +A  +G +  L 
Sbjct: 3328 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVDALQG-HRVVDVACGSGDAQTLC 3386

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 3387 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 3444

Query: 344  V 344
            V
Sbjct: 3445 V 3445



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/221 (31%), Positives = 110/221 (49%), Gaps = 12/221 (5%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFT 186
             V++CG +  G LG G  ++  V   R     +++VV+   V +   HA  +   G+VF+
Sbjct: 2237 KVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 2295

Query: 187  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
             G+      GH  +     +PRL+EALK    + +  G + +  LT  G ++T G   +G
Sbjct: 2296 WGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 2354

Query: 247  QLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGH 303
            +LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG 
Sbjct: 2355 RLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGR 2412

Query: 304  GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            G       P+ I+  R  G  V ++  G +  +AL  SG V
Sbjct: 2413 GGSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVV 2451



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 91/190 (47%), Gaps = 11/190 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2215 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 2272

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L +   +  IA 
Sbjct: 2273 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL-KTKRIRDIAC 2331

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 2332 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 2389

Query: 335  VVALDSSGYV 344
             +AL   G V
Sbjct: 2390 TLALTDEGLV 2399



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 99/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 2329 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 2387

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 2388 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 2446

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 2447 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDAGQVYA 2505

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 2506 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 2548



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 77/162 (47%), Gaps = 5/162 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2185 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 2243

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 2244 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 2303

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG
Sbjct: 2304 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSG 2343



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122  HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 2389 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 2447

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SG V+T G    F  GH  ++  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 2448 SGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAW 2506

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 2507 GDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 2550



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 75/167 (44%), Gaps = 5/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 3379 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 3437

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 3438 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGS 3496

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
             +T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 3497 -YTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 3541



 Score = 48.5 bits (114), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 67/137 (48%), Gaps = 3/137 (2%)

Query: 207  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            P   EAL  +   Q+  G      +T  G ++  G    G+LG G T    TP  +  ++
Sbjct: 3203 PTPCEALAALRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQ 3262

Query: 267  EVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
             V    V + +G  + LA++  G VYS+G   +  LGHG +    +PR I++ R  GI V
Sbjct: 3263 HVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLR--GIEV 3320

Query: 326  VRVSAGDEHVVALDSSG 342
            V V+AG  H   + ++G
Sbjct: 3321 VDVAAGGAHSACVTAAG 3337



 Score = 41.2 bits (95), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 7/113 (6%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3179 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPV----QLIGGEQTLFAVTADGKLY 3234

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G V
Sbjct: 3235 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 3287


>gi|296486689|tpg|DAA28802.1| TPA: hect domain and RLD 5 [Bos taurus]
          Length = 963

 Score = 88.2 bits (217), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 75/230 (32%), Positives = 109/230 (47%), Gaps = 11/230 (4%)

Query: 92  RVLRFLQSVEHSS-DIVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETT 149
           +   +  S+EH+    +      +QIT G YH+L +S    +F+ G +L G LG G    
Sbjct: 132 KPFEYKYSIEHARFQCILQEKNIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFA 191

Query: 150 QCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRP 207
              +   +   S   +VQ+SA E H+  +  SG V++ G N       GH         P
Sbjct: 192 STSTPEIVENLSGVPLVQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKE---SP 248

Query: 208 RLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE 267
             +EAL     + +  G   T  LT  G V T G   +GQLGH  T +   P+ +  L  
Sbjct: 249 SCIEALDDQKVEFLACGGCHTALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGL-- 306

Query: 268 VGS-VVQIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAI 315
           VG+ V QIA G  + LA V+  G V+SFGSG    LG+G   ++L PR +
Sbjct: 307 VGNRVTQIACGRQHTLAYVSDTGKVFSFGSGKEGQLGNGGTRNQLIPRPM 356



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 52/174 (29%), Positives = 92/174 (52%), Gaps = 3/174 (1%)

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
           +++Q++  + H+  + + G++F  G N     G          P +VE L GVP  Q++A
Sbjct: 153 NIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISA 212

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G   +  L++ G+V++ G N  GQLG G T ++ +P  I  L++   V  +A G  +   
Sbjct: 213 GEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALDD-QKVEFLACGGCHTAL 271

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           +T +G+V++FG G    LGH    +EL+PR +      G  V +++ G +H +A
Sbjct: 272 LTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGL--VGNRVTQIACGRQHTLA 323


>gi|218781264|ref|YP_002432582.1| chromosome condensation regulator RCC1 [Desulfatibacillum
           alkenivorans AK-01]
 gi|218762648|gb|ACL05114.1| regulator of chromosome condensation RCC1 [Desulfatibacillum
           alkenivorans AK-01]
          Length = 1525

 Score = 88.2 bits (217), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 76/253 (30%), Positives = 124/253 (49%), Gaps = 27/253 (10%)

Query: 99  SVEHSSDIVETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRI 157
           S E+    +   +    I  G  H+L L  + S +S G +  G LG G   ++     ++
Sbjct: 585 STENRPQKINAISNVAAIACGGSHSLALARDGSFWSWGYNYYGQLGLGDNVSKTTP-RKV 643

Query: 158 NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCG-----HRDTNRPIFRPRLVEA 212
           N  + ++VV ++A + H+  +   G +++ GDN+    G     HR+T      PR V A
Sbjct: 644 N--ALSNVVAMAAGDRHSLALTLDGSLWSWGDNTYGQLGLGDNDHRNT------PRKVNA 695

Query: 213 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
           +  V    + AG   +  LT  G V + G+NT GQLG GD  DR TP+   P+  + ++ 
Sbjct: 696 ISNVVA--IAAGYRHSLALTRDGSVWSWGNNTRGQLGLGDNDDRNTPQ---PVTTISNIK 750

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLG---HGEQHDELQPRAIQTFRRKGIHVVRVS 329
            IA G +Y +A++  G+V+++G   +  LG   HG   DE  P+ +        +VV +S
Sbjct: 751 AIAVGNNYSIAISEEGLVWAWGYNCSGQLGIGTHGSLADENTPQKVIVIS----NVVGLS 806

Query: 330 AGDEHVVALDSSG 342
           AG  H +AL   G
Sbjct: 807 AGSSHSIALTEDG 819



 Score = 81.3 bits (199), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 69/229 (30%), Positives = 109/229 (47%), Gaps = 11/229 (4%)

Query: 115  QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
            +I  G  H L L  + SV+S G +  G LG G   T           + ++V  ++   +
Sbjct: 1037 KIAAGDNHALALAPDGSVWSWGYNSDGQLGLGSSGTYSTKNRPQKINAISNVAAIACGGS 1096

Query: 174  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
            H+  V + G +++ G N     G  D N     P+ V A+  V    + AG  ++  LT 
Sbjct: 1097 HSLAVARDGSLWSWGYNYYGQLGLGD-NYSKTTPQKVNAISNVAA--IAAGEYYSLALTR 1153

Query: 234  RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
             G V + G N+ GQLG GD  DR TP+ +   E + +V  IAAG  + LA+T +G V+S+
Sbjct: 1154 DGSVWSWGDNSDGQLGLGDNEDRNTPQKV---EVLSNVAAIAAGEDHSLALTRDGSVWSW 1210

Query: 294  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            G  S   LG  +  D   P+ + T      ++  ++AG+ H  A+   G
Sbjct: 1211 GRNSRGQLGLDDNDDRNTPQPVTTIS----NIKAIAAGNSHSFAISEEG 1255



 Score = 78.6 bits (192), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 57/188 (30%), Positives = 94/188 (50%), Gaps = 14/188 (7%)

Query: 159  FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGV 216
             P AA   +++A +NHA  +   G V++ G NS      G   T     RP+ + A+  V
Sbjct: 1032 LPPAA---KIAAGDNHALALAPDGSVWSWGYNSDGQLGLGSSGTYSTKNRPQKINAISNV 1088

Query: 217  PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
                +  G + +  +   G + + G N +GQLG GD   + TP+ +     + +V  IAA
Sbjct: 1089 AA--IACGGSHSLAVARDGSLWSWGYNYYGQLGLGDNYSKTTPQKV---NAISNVAAIAA 1143

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
            G  Y LA+T +G V+S+G  S+  LG G+  D   P+ ++       +V  ++AG++H +
Sbjct: 1144 GEYYSLALTRDGSVWSWGDNSDGQLGLGDNEDRNTPQKVEVLS----NVAAIAAGEDHSL 1199

Query: 337  ALDSSGYV 344
            AL   G V
Sbjct: 1200 ALTRDGSV 1207



 Score = 65.5 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 68/244 (27%), Positives = 107/244 (43%), Gaps = 29/244 (11%)

Query: 104 SDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA 163
           S+IV  +AG +      +   L S+ S+++ G +  G LG G    +    T    P  +
Sbjct: 117 SNIVSVAAGRL------FSLALASDGSLWAWGGNYYGQLGMGDNDNR---LTPSKTPGLS 167

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNS----SFCCGHRDTNRPIFRPRLVEALKGVPCK 219
            V  ++  + HA    QSG+V+  G N      F   H D       P  V  L  V  K
Sbjct: 168 DVAAIAGGDYHALAATQSGEVWAMGRNDHGQLGFTGDHADA------PVQVAGLSNV--K 219

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAGP 278
            V AG  F+  L   G V   G+N   QLG G   +   TP   AP+  + ++  IAAG 
Sbjct: 220 SVAAGEFFSLALKNDGTVWAWGNNESAQLGTGIAGEAVATP---APIAVLSNITAIAAGR 276

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            + +A+  +G V+++G+  +  LG G+      P  + +       V  +++G  H +AL
Sbjct: 277 RHAMALAEDGSVWAWGANGSGQLGFGDFETPKAPGRVSSL----ADVTAIASGWFHSLAL 332

Query: 339 DSSG 342
            S G
Sbjct: 333 TSDG 336



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 59/230 (25%), Positives = 98/230 (42%), Gaps = 14/230 (6%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G YH L  + S  V++ G +  G LG   +         +     ++V  V+A E  
Sbjct: 172 IAGGDYHALAATQSGEVWAMGRNDHGQLGFTGDHAD----APVQVAGLSNVKSVAAGEFF 227

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           +  +   G V+  G+N S   G       +  P  +  L  +    + AG      L   
Sbjct: 228 SLALKNDGTVWAWGNNESAQLGTGIAGEAVATPAPIAVLSNI--TAIAAGRRHAMALAED 285

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G V   G+N  GQLG GD     TPK+   +  +  V  IA+G  + LA+T +GV++++G
Sbjct: 286 GSVWAWGANGSGQLGFGDF---ETPKAPGRVSSLADVTAIASGWFHSLALTSDGVLWAWG 342

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           +  +  LG     D+  P  + +      + V  + G  H +A+ + G V
Sbjct: 343 NNGDGRLGTDATSDQSLPAQVSSIS----NAVSFAGGQRHSLAIAADGSV 388



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 50/178 (28%), Positives = 83/178 (46%), Gaps = 7/178 (3%)

Query: 168  VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR-PIFRPRLVEALKGVPCKQVTAGLN 226
            V+A  N +  +   G +++ GDN +   G        +F P  V+AL   P  ++ AG N
Sbjct: 986  VAAGGNFSLALKTDGSLWSWGDNGTGQLGLGLGQSVNVFTPTKVDALP--PAAKIAAGDN 1043

Query: 227  FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
                L   G V + G N+ GQLG G +    T      +  + +V  IA G S+ LAV  
Sbjct: 1044 HALALAPDGSVWSWGYNSDGQLGLGSSGTYSTKNRPQKINAISNVAAIACGGSHSLAVAR 1103

Query: 287  NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            +G ++S+G      LG G+ + +  P+ +        +V  ++AG+ + +AL   G V
Sbjct: 1104 DGSLWSWGYNYYGQLGLGDNYSKTTPQKVNAIS----NVAAIAAGEYYSLALTRDGSV 1157



 Score = 52.0 bits (123), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 35/110 (31%), Positives = 55/110 (50%), Gaps = 7/110 (6%)

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G V   G N + QLG GD ++R  P+  AP+  V ++V +AAG  + LA+  +G ++++G
Sbjct: 86  GTVWVWGRNDYNQLGLGDDINRLAPEQ-APV--VSNIVSVAAGRLFSLALASDGSLWAWG 142

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
                 LG G+  + L P            V  ++ GD H +A   SG V
Sbjct: 143 GNYYGQLGMGDNDNRLTPSKTPGLS----DVAAIAGGDYHALAATQSGEV 188



 Score = 48.9 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 49/188 (26%), Positives = 83/188 (44%), Gaps = 9/188 (4%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G + +L + N  +V++ G++    LG G       +   I   S  ++  ++A   H
Sbjct: 221 VAAGEFFSLALKNDGTVWAWGNNESAQLGTGIAGEAVATPAPIAVLS--NITAIAAGRRH 278

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           A  + + G V+  G N S   G  D   P   P  V +L  V    + +G   +  LT  
Sbjct: 279 AMALAEDGSVWAWGANGSGQLGFGDFETPK-APGRVSSLADV--TAIASGWFHSLALTSD 335

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G +   G+N  G+LG   T D+  P   A +  + + V  A G  + LA+  +G V+S+G
Sbjct: 336 GVLWAWGNNGDGRLGTDATSDQSLP---AQVSSISNAVSFAGGQRHSLAIAADGSVWSWG 392

Query: 295 SGSNFCLG 302
             +   LG
Sbjct: 393 GNAYGQLG 400



 Score = 47.4 bits (111), Expect = 0.011,   Method: Composition-based stats.
 Identities = 40/124 (32%), Positives = 58/124 (46%), Gaps = 8/124 (6%)

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           V AG  F+  L   G +   G N +GQLG GD  +R TP     L +V +   IA G  +
Sbjct: 122 VAAGRLFSLALASDGSLWAWGGNYYGQLGMGDNDNRLTPSKTPGLSDVAA---IAGGDYH 178

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            LA T +G V++ G   +  LG    H +  P  +        +V  V+AG+   +AL +
Sbjct: 179 ALAATQSGEVWAMGRNDHGQLGFTGDHAD-APVQVAGLS----NVKSVAAGEFFSLALKN 233

Query: 341 SGYV 344
            G V
Sbjct: 234 DGTV 237



 Score = 42.0 bits (97), Expect = 0.48,   Method: Composition-based stats.
 Identities = 43/142 (30%), Positives = 63/142 (44%), Gaps = 6/142 (4%)

Query: 201 NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 260
           N  +F P  V+AL       + AG      L   G V + G N+ GQLG G      T  
Sbjct: 531 NDDVFTPTNVDALP--LAASIAAGGGHALALASDGSVWSWGRNSVGQLGLGTGGTYSTEN 588

Query: 261 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR 320
               +  + +V  IA G S+ LA+  +G  +S+G      LG G+   +  PR +     
Sbjct: 589 RPQKINAISNVAAIACGGSHSLALARDGSFWSWGYNYYGQLGLGDNVSKTTPRKVNALS- 647

Query: 321 KGIHVVRVSAGDEHVVALDSSG 342
              +VV ++AGD H +AL   G
Sbjct: 648 ---NVVAMAAGDRHSLALTLDG 666


>gi|262368177|pdb|3KCI|A Chain A, The Third Rld Domain Of Herc2
          Length = 389

 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 73/235 (31%), Positives = 109/235 (46%), Gaps = 8/235 (3%)

Query: 113 NMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS 171
            + + +G  H L L S   V+S G +  G LGHG   + C     I       VV V+A 
Sbjct: 109 KVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDVAAG 167

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TG 229
             H+A V  +G ++T G       GH D+   + +P+LVEAL+G     +  G     T 
Sbjct: 168 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVVDIACGSGDAQTL 226

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
            LT    V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G 
Sbjct: 227 CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSGA 285

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           VY++G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G V
Sbjct: 286 VYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEV 338



 Score = 58.2 bits (139), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 79/172 (45%), Gaps = 4/172 (2%)

Query: 113 NMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS 171
           ++   +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V   
Sbjct: 215 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG-SDGCKVPMKIDSLTGLGVVKVECG 273

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
              +  + +SG V+T G       GH  ++  + RPR V+ L+G     +  G       
Sbjct: 274 SQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCC 332

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           T  G V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 333 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGK-KVNRVACGSAHTLA 383



 Score = 45.8 bits (107), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 67/137 (48%), Gaps = 3/137 (2%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P   EAL  +   Q+  G      +T  G ++  G    G+LG G T    TP  +  ++
Sbjct: 44  PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQ 103

Query: 267 EVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
            V    V + +G  + LA++  G VYS+G   +  LGHG +    +PR I++ R  GI V
Sbjct: 104 HVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLR--GIEV 161

Query: 326 VRVSAGDEHVVALDSSG 342
           V V+AG  H   + ++G
Sbjct: 162 VDVAAGGAHSACVTAAG 178



 Score = 39.3 bits (90), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 42/123 (34%), Positives = 60/123 (48%), Gaps = 11/123 (8%)

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYM 281
           L F G  TI G  H    N  GQLG   G  +  PTP +++A L  V    Q+  G   +
Sbjct: 14  LYFQGSGTIYGWGH----NHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTL 65

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
            AVT +G +Y+ G G+   LG G       P  +++ +   I  V V++G +H +AL S 
Sbjct: 66  FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 125

Query: 342 GYV 344
           G V
Sbjct: 126 GEV 128


>gi|431911480|gb|ELK13686.1| Putative E3 ubiquitin-protein ligase HERC5 [Pteropus alecto]
          Length = 923

 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 71/221 (32%), Positives = 110/221 (49%), Gaps = 5/221 (2%)

Query: 99  SVEHSS-DIVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR 156
           S+EH+    +      +QIT G YH+L +S    +F+ G +L G LG G       +   
Sbjct: 23  SIEHARFQCILQEKNIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGKIFDSTTAPQI 82

Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
           +   S   + Q+SA ++H+  +  SG +++ G N     G   T+   F P L+EAL+  
Sbjct: 83  VEHLSGVPLAQISAGKSHSMALSVSGNIYSWGRNDFGQLGLGHTDDKDF-PSLIEALENQ 141

Query: 217 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
             + +  G + T  LT  G V T G+  +GQLGH  T +   P  +  L     V Q+A 
Sbjct: 142 KVEFLACGGSHTALLTKDGLVFTFGAGKYGQLGHNSTQNELRPCLVTKLAG-NRVTQVAC 200

Query: 277 GPSYMLA-VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
           G  + LA V+  G V+SFGSG    LG+G  H++L P  ++
Sbjct: 201 GRQHTLAYVSDLGKVFSFGSGEEGQLGNGGTHNQLIPLPMK 241



 Score = 87.8 bits (216), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 54/174 (31%), Positives = 94/174 (54%), Gaps = 3/174 (1%)

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
           +++Q++  + H+  + + G++F  G N     G          P++VE L GVP  Q++A
Sbjct: 37  NIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGKIFDSTTAPQIVEHLSGVPLAQISA 96

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G + +  L++ G++++ G N  GQLG G T D+  P  I  LE    V  +A G S+   
Sbjct: 97  GKSHSMALSVSGNIYSWGRNDFGQLGLGHTDDKDFPSLIEALEN-QKVEFLACGGSHTAL 155

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           +T +G+V++FG+G    LGH    +EL+P  +   +  G  V +V+ G +H +A
Sbjct: 156 LTKDGLVFTFGAGKYGQLGHNSTQNELRPCLVT--KLAGNRVTQVACGRQHTLA 207


>gi|55249804|gb|AAH85921.1| Herc6 protein, partial [Rattus norvegicus]
          Length = 1034

 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 73/237 (30%), Positives = 117/237 (49%), Gaps = 11/237 (4%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGH-GPETTQCVSFTRINFPSAAHVVQVSAS 171
           ++  +G  H+LL+ SN  V+SCG +  G LG   P++T+      I   S  H+  VS  
Sbjct: 31  LKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTK--RPEPIQALSTVHIDLVSCG 88

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           + H+  V   G+VFT G  S    G  ++    F P  + +L G+   QV+ G   +  L
Sbjct: 89  KEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLAL 148

Query: 232 TIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           +  G V + GSN  GQLG G+ L  + +P+ +  LE +  + Q+AAG ++  A++  G  
Sbjct: 149 SEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGI-PLAQVAAGGTHSFALSLMGTS 207

Query: 291 YSFG---SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           + +G   SG     G+  +    +P +I     K ++VV +S G EH   L   G V
Sbjct: 208 FGWGNNRSGQLALSGNSAKEQIYKPHSIGAL--KTLNVVYISCGYEHTSVLTEDGQV 262



 Score = 67.8 bits (164), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 98/189 (51%), Gaps = 6/189 (3%)

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           R+   +   +++ ++ E H+  +  + +V++CGDNS    G + + +   RP  ++AL  
Sbjct: 21  RLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQK-SPQSTKRPEPIQALST 79

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQI 274
           V    V+ G   +  +  +G V T G+ + GQLG G++ +    P  I  L  +  ++Q+
Sbjct: 80  VHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGI-KIIQV 138

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDE 333
           + G  + LA++ +G V+S+GS     LG G     +  P+ +++   +GI + +V+AG  
Sbjct: 139 SCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSL--EGIPLAQVAAGGT 196

Query: 334 HVVALDSSG 342
           H  AL   G
Sbjct: 197 HSFALSLMG 205



 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 68/140 (48%), Gaps = 4/140 (2%)

Query: 206 RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 265
           +PR +EA  G+   +  +G   +  L     V++CG N+ GQLG         P+ I  L
Sbjct: 18  QPRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEPIQAL 77

Query: 266 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD-ELQPRAIQTFRRKGIH 324
             V  +  ++ G  + +AV   G V+++G+GS   LG GE  +    P  I +    GI 
Sbjct: 78  STV-HIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSL--AGIK 134

Query: 325 VVRVSAGDEHVVALDSSGYV 344
           +++VS G  H +AL   G V
Sbjct: 135 IIQVSCGHYHSLALSEDGQV 154



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 82/187 (43%), Gaps = 6/187 (3%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++ G YH+L +S +  VFS GS+  G LG G       S  ++       + QV+A  
Sbjct: 136 IQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGG 195

Query: 173 NHAAFVLQSGQVFTCGDNSS--FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            H+  +   G  F  G+N S             I++P  + ALK +    ++ G   T  
Sbjct: 196 THSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSV 255

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA-VTGNGV 289
           LT  G V T G ++  QL H     R  P+ I  +   G V QI  G  + +A V   G 
Sbjct: 256 LTEDGQVFTFGGSSSEQLQHSPRSGRGGPQLIEGIG--GHVSQIECGSYHTIAYVYTTGQ 313

Query: 290 VYSFGSG 296
           V S G G
Sbjct: 314 VVSLGRG 320


>gi|117558047|gb|AAI27373.1| LOC100036667 protein [Xenopus (Silurana) tropicalis]
          Length = 967

 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 108/231 (46%), Gaps = 5/231 (2%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           ++ G  HTL +++   VFS G ++ G +G             I   S   +VQV+   +H
Sbjct: 89  VSCGEAHTLALNDKGQVFSWGHAVYGQIGLSTAEEYIRVPRNIKSLSDVQIVQVACGHHH 148

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           +  + +   +F+ G N     G     +    PR +++L G+P   + AG   +  LTI 
Sbjct: 149 SLALSKDSDIFSWGQNQYGQLGLGLEIKKECAPRHIKSLSGIPFAHIAAGGGHSFALTIS 208

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G +   G N  GQLG  D  DR  P  +  L     ++ I  G  +  A+T  G V++FG
Sbjct: 209 GAIFGWGRNKFGQLGLTDETDRNVPALLKSLRS-QKIIHICCGEDHTAALTKEGGVFTFG 267

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYV 344
           +G    LGH   + E+ PR +  F   G  V +++ G +H +A + SSG +
Sbjct: 268 AGGYGQLGHNSTNHEVNPRKV--FELMGSIVTQIACGRQHTLAFVPSSGRI 316



 Score = 79.0 bits (193), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 102/207 (49%), Gaps = 8/207 (3%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G +H+L +S +S +FS G +  G LG G E  +  +   I   S      ++A  
Sbjct: 140 VQVACGHHHSLALSKDSDIFSWGQNQYGQLGLGLEIKKECAPRHIKSLSGIPFAHIAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
            H+  +  SG +F  G N     G  D T+R +  P L+++L+      +  G + T  L
Sbjct: 200 GHSFALTISGAIFGWGRNKFGQLGLTDETDRNV--PALLKSLRSQKIIHICCGEDHTAAL 257

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGV 289
           T  G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  + LA V  +G 
Sbjct: 258 TKEGGVFTFGAGGYGQLGHNSTNHEVNPRKV--FELMGSIVTQIACGRQHTLAFVPSSGR 315

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQ 316
           +YSFG G N  LG G   +   P  ++
Sbjct: 316 IYSFGLGGNGQLGTGSTINRKSPFTVK 342



 Score = 70.9 bits (172), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 66/213 (30%), Positives = 97/213 (45%), Gaps = 9/213 (4%)

Query: 135 GSSLCGVLGHGPETTQCV-SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V    R +F    +V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNTSFGQLGLGGIDEEVVLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 253
             GH  + R   +P  V AL       V+ G   T  L  +G V + G   +GQ+G    
Sbjct: 65  QLGHDKSRR---KPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAVYGQIGLSTA 121

Query: 254 LDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
            +    P++I  L +V  +VQ+A G  + LA++ +  ++S+G      LG G E   E  
Sbjct: 122 EEYIRVPRNIKSLSDV-QIVQVACGHHHSLALSKDSDIFSWGQNQYGQLGLGLEIKKECA 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           PR I++    GI    ++AG  H  AL  SG +
Sbjct: 181 PRHIKSL--SGIPFAHIAAGGGHSFALTISGAI 211


>gi|156120637|ref|NP_001095465.1| E3 ISG15--protein ligase HERC5 [Bos taurus]
 gi|151555709|gb|AAI49082.1| HERC5 protein [Bos taurus]
          Length = 958

 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 75/230 (32%), Positives = 109/230 (47%), Gaps = 11/230 (4%)

Query: 92  RVLRFLQSVEHSS-DIVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETT 149
           +   +  S+EH+    +      +QIT G YH+L +S    +F+ G +L G LG G    
Sbjct: 127 KPFEYKYSIEHARFQCILQEKNIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFA 186

Query: 150 QCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRP 207
              +   +   S   +VQ+SA E H+  +  SG V++ G N       GH         P
Sbjct: 187 STSTPEIVENLSGVPLVQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKE---SP 243

Query: 208 RLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE 267
             +EAL     + +  G   T  LT  G V T G   +GQLGH  T +   P+ +  L  
Sbjct: 244 SCIEALDDQKVEFLACGGCHTALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGL-- 301

Query: 268 VGS-VVQIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAI 315
           VG+ V QIA G  + LA V+  G V+SFGSG    LG+G   ++L PR +
Sbjct: 302 VGNRVTQIACGRQHTLAYVSDTGKVFSFGSGKEGQLGNGGTRNQLIPRPM 351



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 52/174 (29%), Positives = 92/174 (52%), Gaps = 3/174 (1%)

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
           +++Q++  + H+  + + G++F  G N     G          P +VE L GVP  Q++A
Sbjct: 148 NIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISA 207

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G   +  L++ G+V++ G N  GQLG G T ++ +P  I  L++   V  +A G  +   
Sbjct: 208 GEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALDD-QKVEFLACGGCHTAL 266

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           +T +G+V++FG G    LGH    +EL+PR +      G  V +++ G +H +A
Sbjct: 267 LTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGL--VGNRVTQIACGRQHTLA 318


>gi|405965978|gb|EKC31310.1| Putative E3 ubiquitin-protein ligase HERC2 [Crassostrea gigas]
          Length = 5345

 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 112/236 (47%), Gaps = 10/236 (4%)

Query: 113  NMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS 171
             + + +G  H L +S    V+S G    G LGHG   + C     I+      VV ++A 
Sbjct: 4550 KLAVNSGGKHCLALSAEGEVYSWGEGEDGKLGHG-NRSPCDRPRVIDSLRGKEVVDIAAG 4608

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
              H+A +  +G+++T G       GH D+ ++P  RP+LVEALK      +  G      
Sbjct: 4609 GAHSACITANGELYTWGKGRYGRLGHGDSEDQP--RPKLVEALKSYRVVDMACGSGDAQT 4666

Query: 231  LTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
            L I    +V + G   +G+LG G +     P  I  L+  G V+++  G  + +A+T +G
Sbjct: 4667 LCITDDDNVWSWGDGDYGKLGRGGSDGCKVPMKIETLQGQG-VMKVECGSQFSVALTKSG 4725

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             VY++G G    LGHG      +PR +   + K   V+ V+ G  H VA   +G V
Sbjct: 4726 SVYTWGKGDYHRLGHGSDDHVRRPRKVSALQNK--KVIDVACGSLHCVACTDTGEV 4779



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 69/228 (30%), Positives = 104/228 (45%), Gaps = 7/228 (3%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+   L ++  VFS G    G LGH      C     I    +  V  ++   +H+A +
Sbjct: 3561 GRHSLALTTDGKVFSWGEGDDGKLGHFSRWN-CDKPRLIEALKSKRVRDIACGSSHSAAI 3619

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              +G ++T G       GH D N    +P+ V+AL      QV  G     T  LT  G 
Sbjct: 3620 TSNGDLYTWGLGEYGRLGHGD-NTTQLKPKQVKALAHERVVQVACGSRDAQTLALTDEGK 3678

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V++ G    G+LG G +     P  +  L +   V QI  G  + LA+T +G V+++G G
Sbjct: 3679 VYSWGDGDFGKLGRGGSEGCNVPHEVDRLRD-QKVCQIECGAQFSLALTKSGQVWTWGKG 3737

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              F LGHG      +P+ ++    KG  +V V+ G  H +A+  SG V
Sbjct: 3738 DYFRLGHGTDAHVRKPQIVEGL--KGKKIVHVAVGALHCLAVTDSGQV 3783



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/220 (30%), Positives = 105/220 (47%), Gaps = 10/220 (4%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFT 186
             V++CG +  G LG G  TT  VS  R     + +V++   V +   H+  +   G+VF+
Sbjct: 3517 KVYACGEATNGRLGLGI-TTGTVSVPRQITSLSQYVIKKVAVHSGGRHSLALTTDGKVFS 3575

Query: 187  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
             G+      GH  +     +PRL+EALK    + +  G + +  +T  G ++T G   +G
Sbjct: 3576 WGEGDDGKLGHF-SRWNCDKPRLIEALKSKRVRDIACGSSHSAAITSNGDLYTWGLGEYG 3634

Query: 247  QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGHG 304
            +LGHGD   +  PK +  L     VVQ+A G   +  LA+T  G VYS+G G    LG G
Sbjct: 3635 RLGHGDNTTQLKPKQVKALAH-ERVVQVACGSRDAQTLALTDEGKVYSWGDGDFGKLGRG 3693

Query: 305  EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
                   P  +   R +   V ++  G +  +AL  SG V
Sbjct: 3694 GSEGCNVPHEVDRLRDQ--KVCQIECGAQFSLALTKSGQV 3731



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 63/227 (27%), Positives = 106/227 (46%), Gaps = 9/227 (3%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G+++  L S+  VFS G+   G LGHG +         I   S   V ++    +++  +
Sbjct: 628 GKHYMGLTSDGEVFSWGNGDGGKLGHG-DYQNHEEPALITGLSGKQVAKICCGSSYSVAL 686

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI--RGH 236
             +G+V++ G  +    GH  ++     P L++  KG     V  G      L +   G 
Sbjct: 687 TSNGEVYSWGKGNFGRLGH-GSSEDQTTPMLLKFFKGHRIVDVACGSGDAQTLAVTDSGA 745

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGS 295
           V++ G   +G+LG G      TPK I  L  +G  VV++  G  + +A+T +G VY++G 
Sbjct: 746 VYSWGDGDYGKLGRGGNDGCKTPKVIEKL--MGQDVVRVYCGNQFSMALTKSGAVYTWGK 803

Query: 296 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           G N+ LGHG +     P+ I+    K   V  ++ G  H +A+   G
Sbjct: 804 GDNYRLGHGTEDHARHPKQIEALSSK--KVKDIAIGSLHCMAITEDG 848



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/219 (28%), Positives = 101/219 (46%), Gaps = 4/219 (1%)

Query: 128  NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
             ++VF  G +    LG GP+ ++    T  +  SA   VQ+         V Q G+V+ C
Sbjct: 3463 QTNVFCWGLNDKDQLG-GPKGSKIKLPTLNDNLSALRCVQIVGGSKSLFCVTQEGKVYAC 3521

Query: 188  GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTH 245
            G+ ++   G   T   +  PR + +L     K+V   +G   +  LT  G V + G    
Sbjct: 3522 GEATNGRLGLGITTGTVSVPRQITSLSQYVIKKVAVHSGGRHSLALTTDGKVFSWGEGDD 3581

Query: 246  GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
            G+LGH    +   P+ I  L+    V  IA G S+  A+T NG +Y++G G    LGHG+
Sbjct: 3582 GKLGHFSRWNCDKPRLIEALKS-KRVRDIACGSSHSAAITSNGDLYTWGLGEYGRLGHGD 3640

Query: 306  QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
               +L+P+ ++    + +  V   + D   +AL   G V
Sbjct: 3641 NTTQLKPKQVKALAHERVVQVACGSRDAQTLALTDEGKV 3679



 Score = 72.0 bits (175), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 66/224 (29%), Positives = 94/224 (41%), Gaps = 7/224 (3%)

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF--V 178
           Y   L SN  V+S G    G LGHG    Q      + F     +V V+     A    V
Sbjct: 682 YSVALTSNGEVYSWGKGNFGRLGHGSSEDQTTPML-LKFFKGHRIVDVACGSGDAQTLAV 740

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
             SG V++ GD      G R  N     P+++E L G    +V  G  F+  LT  G V+
Sbjct: 741 TDSGAVYSWGDGDYGKLG-RGGNDGCKTPKVIEKLMGQDVVRVYCGNQFSMALTKSGAVY 799

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           T G   + +LGHG       PK I  L     V  IA G  + +A+T +G +Y +G    
Sbjct: 800 TWGKGDNYRLGHGTEDHARHPKQIEALSS-KKVKDIAIGSLHCMAITEDGELYGWGRNEQ 858

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
             LG+    +  +P  I     +G +++ V+ G     A  S G
Sbjct: 859 GQLGNPSISNFTEPTLIGGM--EGKNIIGVACGPTQTFAWTSGG 900



 Score = 67.8 bits (164), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 45/121 (37%), Positives = 63/121 (52%), Gaps = 2/121 (1%)

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G ++ G LT  G V + G+   G+LGHGD  +   P  I  L     V +I  G SY +A
Sbjct: 628 GKHYMG-LTSDGEVFSWGNGDGGKLGHGDYQNHEEPALITGLSG-KQVAKICCGSSYSVA 685

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           +T NG VYS+G G+   LGHG   D+  P  ++ F+   I  V   +GD   +A+  SG 
Sbjct: 686 LTSNGEVYSWGKGNFGRLGHGSSEDQTTPMLLKFFKGHRIVDVACGSGDAQTLAVTDSGA 745

Query: 344 V 344
           V
Sbjct: 746 V 746



 Score = 64.7 bits (156), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 101/225 (44%), Gaps = 9/225 (4%)

Query: 116  ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  I SN  +++ G    G LGHG  TTQ +   ++   +   VVQV+     
Sbjct: 3609 IACGSSHSAAITSNGDLYTWGLGEYGRLGHGDNTTQ-LKPKQVKALAHERVVQVACGSRD 3667

Query: 175  AAFV--LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A  +     G+V++ GD      G R  +     P  V+ L+     Q+  G  F+  LT
Sbjct: 3668 AQTLALTDEGKVYSWGDGDFGKLG-RGGSEGCNVPHEVDRLRDQKVCQIECGAQFSLALT 3726

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG       P+ +  L+    +V +A G  + LAVT +G V++
Sbjct: 3727 KSGQVWTWGKGDYFRLGHGTDAHVRKPQIVEGLKG-KKIVHVAVGALHCLAVTDSGQVFA 3785

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +     +G  + +V+ G  H +A
Sbjct: 3786 WGDNDHGQQGNGTTTVNRKPALVVL---EGYKISKVACGSSHSIA 3827



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 92/213 (43%), Gaps = 10/213 (4%)

Query: 113  NMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS 171
            +M   +G   TL I++  +V+S G    G LG G  +  C    +I       V++V   
Sbjct: 4656 DMACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGG-SDGCKVPMKIETLQGQGVMKVECG 4714

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
               +  + +SG V+T G       GH   +  + RPR V AL+      V  G       
Sbjct: 4715 SQFSVALTKSGSVYTWGKGDYHRLGHGSDDH-VRRPRKVSALQNKKVIDVACGSLHCVAC 4773

Query: 232  TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLAVTGNGVV 290
            T  G V + G N  GQLG G T     P+ +A L  +G  + ++A G ++ LA + N  V
Sbjct: 4774 TDTGEVFSWGDNDEGQLGDGTTNAIQRPRLVASL--LGKKINRVACGSAHSLAWSTNKAV 4831

Query: 291  YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 323
             +    S+  +    +++ LQ   I   R + I
Sbjct: 4832 SAGKLPSDIPM----EYNHLQNIPITALRNRLI 4860



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 54/197 (27%), Positives = 83/197 (42%), Gaps = 7/197 (3%)

Query: 118 TGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL +++S +V+S G    G LG G     C +   I       VV+V      + 
Sbjct: 732 SGDAQTLAVTDSGAVYSWGDGDYGKLGRGG-NDGCKTPKVIEKLMGQDVVRVYCGNQFSM 790

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + +SG V+T G   ++  GH  T      P+ +EAL     K +  G      +T  G 
Sbjct: 791 ALTKSGAVYTWGKGDNYRLGH-GTEDHARHPKQIEALSSKKVKDIAIGSLHCMAITEDGE 849

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG---VVYSF 293
           ++  G N  GQLG+    +   P  I  +E   +++ +A GP+   A T  G   V    
Sbjct: 850 LYGWGRNEQGQLGNPSISNFTEPTLIGGMEG-KNIIGVACGPTQTFAWTSGGQWIVSSRV 908

Query: 294 GSGSNFCLGHGEQHDEL 310
               + C    EQ DEL
Sbjct: 909 PFIVDVCKSTFEQLDEL 925



 Score = 47.8 bits (112), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 48/163 (29%), Positives = 75/163 (46%), Gaps = 4/163 (2%)

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SGQ++  G N     G  D  + + +P   EAL      Q+  G      +T  G V   
Sbjct: 4460 SGQIWGWGHNHRGQLGGVDGAK-VKQPVSCEALAVTRPIQLVGGEQTLFAVTAEGKVFAT 4518

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
            G    G+LG G T     P  +  ++ V    + + +G  + LA++  G VYS+G G + 
Sbjct: 4519 GYGAGGRLGVGGTESVSHPTQLESIQHVFIKKLAVNSGGKHCLALSAEGEVYSWGEGEDG 4578

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
             LGHG +    +PR I + R  G  VV ++AG  H   + ++G
Sbjct: 4579 KLGHGNRSPCDRPRVIDSLR--GKEVVDIAAGGAHSACITANG 4619


>gi|449443826|ref|XP_004139677.1| PREDICTED: uncharacterized protein LOC101214149 [Cucumis sativus]
          Length = 1118

 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 116/238 (48%), Gaps = 23/238 (9%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           +  G +HT LIS++  +F+ G    GVLGHG +  + +S+ R ++  +    + V+    
Sbjct: 388 VACGPWHTALISSTGQLFTFGDGTFGVLGHGDK--KSISYPREVDSLTGLRTIAVACGVW 445

Query: 174 HAAFVLQ-----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           H A V++           SG++FT GD      GH D   P  +P  V AL      ++ 
Sbjct: 446 HTAAVVEVIMTQSSTSIPSGKLFTWGDGDKNRLGHGD-KEPRLKPTCVPALIDYNFHKIA 504

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
            G + T  LT  G V T GS+ +GQLG  H D   +P       L E  S  ++A G  +
Sbjct: 505 CGHSITIGLTTSGQVFTVGSSVYGQLGNPHADG-KQPCLVEDKLLGE--SAEEVACGAYH 561

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           ++ +T    VY++G G+N  LGHG+  D   P  +++ + K  HV  ++ G  +  A+
Sbjct: 562 VMVLTSKNEVYTWGKGANGRLGHGDVEDRKSPTLVESLKDK--HVKIIACGSNYSAAI 617



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/167 (30%), Positives = 83/167 (49%), Gaps = 5/167 (2%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+A V + G+VFT G+ +    G     + + +PRLVEAL       V  G   T  +T+
Sbjct: 287 HSAIVTRQGEVFTWGEETGGRLG-LGMGKDVTQPRLVEALAATTVDLVACGEFHTCAVTM 345

Query: 234 RGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++T G   H  G LG+G  +    PK I+ + E   V  +A GP +   ++  G ++
Sbjct: 346 DGELYTWGDGVHNAGLLGNGTDVSHWMPKRISGILEGLQVAYVACGPWHTALISSTGQLF 405

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           +FG G+   LGHG++     PR + +    G+  + V+ G  H  A+
Sbjct: 406 TFGDGTFGVLGHGDKKSISYPREVDSL--TGLRTIAVACGVWHTAAV 450


>gi|149033232|gb|EDL88033.1| potential ubiquitin ligase, isoform CRA_a [Rattus norvegicus]
          Length = 449

 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 73/237 (30%), Positives = 117/237 (49%), Gaps = 11/237 (4%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGH-GPETTQCVSFTRINFPSAAHVVQVSAS 171
           ++  +G  H+LL+ SN  V+SCG +  G LG   P++T+      I   S  H+  VS  
Sbjct: 24  LKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTK--RPEPIQALSTVHIDLVSCG 81

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           + H+  V   G+VFT G  S    G  ++    F P  + +L G+   QV+ G   +  L
Sbjct: 82  KEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLAL 141

Query: 232 TIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           +  G V + GSN  GQLG G+ L  + +P+ +  LE +  + Q+AAG ++  A++  G  
Sbjct: 142 SEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGI-PLAQVAAGGTHSFALSLMGTS 200

Query: 291 YSFG---SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           + +G   SG     G+  +    +P +I     K ++VV +S G EH   L   G V
Sbjct: 201 FGWGNNRSGQLALSGNSAKEQIYKPHSIGAL--KTLNVVYISCGYEHTSVLTEDGQV 255



 Score = 68.2 bits (165), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 98/189 (51%), Gaps = 6/189 (3%)

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           R+   +   +++ ++ E H+  +  + +V++CGDNS    G + + +   RP  ++AL  
Sbjct: 14  RLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQK-SPQSTKRPEPIQALST 72

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQI 274
           V    V+ G   +  +  +G V T G+ + GQLG G++ +    P  I  L  +  ++Q+
Sbjct: 73  VHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGI-KIIQV 131

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDE 333
           + G  + LA++ +G V+S+GS     LG G     +  P+ +++   +GI + +V+AG  
Sbjct: 132 SCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSL--EGIPLAQVAAGGT 189

Query: 334 HVVALDSSG 342
           H  AL   G
Sbjct: 190 HSFALSLMG 198



 Score = 61.2 bits (147), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 68/140 (48%), Gaps = 4/140 (2%)

Query: 206 RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 265
           +PR +EA  G+   +  +G   +  L     V++CG N+ GQLG         P+ I  L
Sbjct: 11  QPRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEPIQAL 70

Query: 266 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD-ELQPRAIQTFRRKGIH 324
             V  +  ++ G  + +AV   G V+++G+GS   LG GE  +    P  I +    GI 
Sbjct: 71  STV-HIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSL--AGIK 127

Query: 325 VVRVSAGDEHVVALDSSGYV 344
           +++VS G  H +AL   G V
Sbjct: 128 IIQVSCGHYHSLALSEDGQV 147



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 82/187 (43%), Gaps = 6/187 (3%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++ G YH+L +S +  VFS GS+  G LG G       S  ++       + QV+A  
Sbjct: 129 IQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGG 188

Query: 173 NHAAFVLQSGQVFTCGDNSS--FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            H+  +   G  F  G+N S             I++P  + ALK +    ++ G   T  
Sbjct: 189 THSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSV 248

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA-VTGNGV 289
           LT  G V T G ++  QL H     R  P+ I  +   G V QI  G  + +A V   G 
Sbjct: 249 LTEDGQVFTFGGSSSEQLQHSPRSGRGGPQLIEGIG--GHVSQIECGSYHTIAYVYTTGQ 306

Query: 290 VYSFGSG 296
           V S G G
Sbjct: 307 VVSLGRG 313


>gi|119578071|gb|EAW57667.1| hCG2006901, isoform CRA_d [Homo sapiens]
          Length = 1677

 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 110/237 (46%), Gaps = 17/237 (7%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 169
           + G ++  L +   V+S G    G LGHG       P+     S  +    +  HVV ++
Sbjct: 493 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AGKHVVHIA 548

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G     
Sbjct: 549 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQ 607

Query: 230 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
            L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +
Sbjct: 608 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSIALTKD 666

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V
Sbjct: 667 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEV 721



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/187 (31%), Positives = 94/187 (50%), Gaps = 20/187 (10%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 444 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 492

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 493 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 552

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 553 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 610

Query: 338 LDSSGYV 344
           +  +G V
Sbjct: 611 VTENGQV 617



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 83/180 (46%), Gaps = 5/180 (2%)

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS--ASENHAAFV 178
           Y   + +   +++ G    G LGHG    + +            V+ V+  + +     V
Sbjct: 553 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAV 611

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
            ++GQV++ GD      G R  +     P+L+E L+ +   +V  G  F+  LT  G V+
Sbjct: 612 TENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 670

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           + G   + +LGHG       PK +  L+    V+ +AAG ++ LA+T +  V+S+GS   
Sbjct: 671 SWGKGDNQRLGHGTEEHVRYPKLLEGLQG-KKVIDVAAGSTHCLALTEDSEVHSWGSNDQ 729



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 603 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 661

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 662 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 720

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 721 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 766


>gi|27923073|gb|AAO27475.1| HERC2 [Homo sapiens]
          Length = 328

 Score = 87.8 bits (216), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 72/228 (31%), Positives = 106/228 (46%), Gaps = 7/228 (3%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           GR+ T L  +  VF  G    G LGH      C     I       +  ++   +H+A +
Sbjct: 94  GRHATALTVDGKVFWWGEGDDGKLGH-FSRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 152

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
             SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 153 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 211

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 212 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 270

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             F LGHG      +P+ ++  R K   +V V+ G  H +A+  SG V
Sbjct: 271 DYFRLGHGSDVHVRKPQVVEGLRGK--KIVHVAVGALHCLAVTDSGQV 316



 Score = 78.2 bits (191), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 69/221 (31%), Positives = 109/221 (49%), Gaps = 12/221 (5%)

Query: 130 SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFT 186
            V++CG +  G LG G  ++  V   R     +++VV+   V +   HA  +   G+VF 
Sbjct: 50  KVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFW 108

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G+      GH  +     +PRL+EALK    + +  G + +  LT  G ++T G   +G
Sbjct: 109 WGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 167

Query: 247 QLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGH 303
           +LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG 
Sbjct: 168 RLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGR 225

Query: 304 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G       P+ I+  R  G  V ++  G +  +AL  SG V
Sbjct: 226 GGSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVV 264



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 61/202 (30%), Positives = 94/202 (46%), Gaps = 17/202 (8%)

Query: 155 TRINFPS------AAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFR 206
           ++I  PS      A +VVQV+        V   G+V+ CG+  N     G      PI  
Sbjct: 16  SKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI-- 73

Query: 207 PRLVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
           PR + AL     K+V   +G      LT+ G V   G    G+LGH   ++   P+ I  
Sbjct: 74  PRQITALSSYVVKKVAVHSGGRHATALTVDGKVFWWGEGDDGKLGHFSRMNCDKPRLIEA 133

Query: 265 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
           L +   +  IA G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  
Sbjct: 134 L-KTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHR 190

Query: 325 VVRVSAG--DEHVVALDSSGYV 344
           V++V+ G  D   +AL   G V
Sbjct: 191 VIQVACGSRDAQTLALTDEGLV 212



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 86/195 (44%), Gaps = 11/195 (5%)

Query: 115 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+    
Sbjct: 141 DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSR 199

Query: 174 HAA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  L
Sbjct: 200 DAQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 258

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           T  G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY
Sbjct: 259 TKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGK-KIVHVAVGALHCLAVTDSGQVY 317

Query: 292 SFGSGSNFCLGHGEQ 306
           ++G        HG+Q
Sbjct: 318 AWGDND-----HGQQ 327



 Score = 45.8 bits (107), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 57/129 (44%), Gaps = 3/129 (2%)

Query: 122 HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 202 QTLALTDEGLVFSWGDGDFGKLGRGG-SEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 260

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           SG V+T G    F  GH  ++  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 261 SGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 319

Query: 241 GSNTHGQLG 249
           G N HGQ G
Sbjct: 320 GDNDHGQQG 328


>gi|449475602|ref|XP_004154499.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101229506 [Cucumis sativus]
          Length = 1079

 Score = 87.8 bits (216), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 116/238 (48%), Gaps = 23/238 (9%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           +  G +HT LIS++  +F+ G    GVLGHG + +  +S+ R ++  +    + V+    
Sbjct: 349 VACGPWHTALISSTGQLFTFGDGTFGVLGHGDKXS--ISYPREVDSLTGLRTIAVACGVW 406

Query: 174 HAAFVLQ-----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           H A V++           SG++FT GD      GH D   P  +P  V AL      ++ 
Sbjct: 407 HTAAVVEVIMTQSSTSIPSGKLFTWGDGDKNRLGHGD-KEPRLKPTCVPALIDYNFHKIA 465

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
            G + T  LT  G V T GS+ +GQLG  H D   +P       L E  S  ++A G  +
Sbjct: 466 CGHSITIGLTTSGQVFTVGSSVYGQLGNPHADG-KQPCLVEDKLLGE--SAEEVACGAYH 522

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           ++ +T    VY++G G+N  LGHG+  D   P  +++ + K  HV  ++ G  +  A+
Sbjct: 523 VMVLTSKNEVYTWGKGANGRLGHGDVEDRKSPTLVESLKDK--HVKIIACGSNYSAAI 578



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/167 (30%), Positives = 83/167 (49%), Gaps = 5/167 (2%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+A V + G+VFT G+ +    G     + + +PRLVEAL       V  G   T  +T+
Sbjct: 248 HSAIVTRQGEVFTWGEETGGRLG-LGMGKDVTQPRLVEALAATTVDLVACGEFHTCAVTM 306

Query: 234 RGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++T G   H  G LG+G  +    PK I+ + E   V  +A GP +   ++  G ++
Sbjct: 307 DGELYTWGDGVHNAGLLGNGTDVSHWMPKRISGILEGLQVAYVACGPWHTALISSTGQLF 366

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           +FG G+   LGHG++     PR + +    G+  + V+ G  H  A+
Sbjct: 367 TFGDGTFGVLGHGDKXSISYPREVDSL--TGLRTIAVACGVWHTAAV 411


>gi|395746465|ref|XP_002825266.2| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Pongo abelii]
          Length = 4581

 Score = 87.8 bits (216), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 118/251 (47%), Gaps = 12/251 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 3777 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 3830

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 3831 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 3889

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 3890 HRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 3948

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 3949 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4006

Query: 334  HVVALDSSGYV 344
            H V     G V
Sbjct: 4007 HCVCCTEDGEV 4017



 Score = 87.8 bits (216), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 110/237 (46%), Gaps = 17/237 (7%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 169
           + G ++  L +   V+S G    G LGHG       P+     S  +    +  HVV ++
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AGKHVVHIA 557

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G     
Sbjct: 558 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQ 616

Query: 230 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
            L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +
Sbjct: 617 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSIALTKD 675

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V
Sbjct: 676 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEV 730



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/187 (31%), Positives = 94/187 (50%), Gaps = 20/187 (10%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 501

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 561

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 562 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 619

Query: 338 LDSSGYV 344
           +  +G V
Sbjct: 620 VTENGQV 626



 Score = 71.2 bits (173), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 68/223 (30%), Positives = 102/223 (45%), Gaps = 17/223 (7%)

Query: 128  NSSVFSCGSSLCGVLGH---GPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
            +  VFS G    G LGH    P   + +   RI          ++   +H+A +  SG++
Sbjct: 2818 DGKVFSWGEGDDGKLGHFSRMPRLIEALKTKRIR--------DIACGSSHSAALTSSGEL 2869

Query: 185  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGHVHTCGS 242
            +T G       GH D N    +P++V+ L G    QV  G     T  LT  G V + G 
Sbjct: 2870 YTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSLGD 2928

Query: 243  NTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 301
                ++G G  +     P++I  L   G V QI  G  + LA+T +GVV+++G G  F L
Sbjct: 2929 GDLWKIGPGPEVKGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKGDYFRL 2987

Query: 302  GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            GHG      +P+ ++  R K I V    +G  H +A+  SG V
Sbjct: 2988 GHGSDVHVRKPQVVEGLRGKKI-VACSCSGALHCLAVTDSGQV 3029



 Score = 70.9 bits (172), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 57/183 (31%), Positives = 89/183 (48%), Gaps = 13/183 (7%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V +  +   F    G+VF+ G+      GH         PRL+EALK    + +  G 
Sbjct: 2803 VAVHSGTSQTGFXPVDGKVFSWGEGDDGKLGHFSR-----MPRLIEALKTKRIRDIACGS 2857

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYML 282
            + +  LT  G ++T G   +G+LGHGD   +  PK +  L  +G  V+Q+A G   +  L
Sbjct: 2858 SHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTL 2915

Query: 283  AVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
            A+T  G+V+S G G  + +G G +      P+ I+  R  G  V ++  G +  +AL  S
Sbjct: 2916 ALTDEGLVFSLGDGDLWKIGPGPEVKGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKS 2973

Query: 342  GYV 344
            G V
Sbjct: 2974 GVV 2976



 Score = 68.2 bits (165), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 98/225 (43%), Gaps = 6/225 (2%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 2853 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 2911

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD   +  G     +    P+ +E L G    Q+  G  F+  LT
Sbjct: 2912 AQTLALTDEGLVFSLGDGDLWKIGPGPEVKGCNIPQNIERLNGQGVCQIECGAQFSLALT 2971

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     V    +G  + LAVT +G VY+
Sbjct: 2972 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVACSCSGALHCLAVTDSGQVYA 3031

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3032 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3074



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 58/192 (30%), Positives = 92/192 (47%), Gaps = 17/192 (8%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCC---GHRDTNRPIFRPR-LVEALKGV 216
            SA +VVQV+        V   G+V+ CG+ + +     G      PI  P   + AL   
Sbjct: 2741 SALNVVQVAGGSKSLFAVTVEGKVYACGEATKWPAWGLGISSGTVPI--PHGXITALSSY 2798

Query: 217  PCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 274
              K+V   +G + TGF  + G V + G    G+LGH   +    P+ I  L +   +  I
Sbjct: 2799 VVKKVAVHSGTSQTGFXPVDGKVFSWGEGDDGKLGHFSRM----PRLIEAL-KTKRIRDI 2853

Query: 275  AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--D 332
            A G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D
Sbjct: 2854 ACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRD 2911

Query: 333  EHVVALDSSGYV 344
               +AL   G V
Sbjct: 2912 AQTLALTDEGLV 2923



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 82/177 (46%), Gaps = 5/177 (2%)

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA--FV 178
           Y   + +   +++ G    G LGHG    + +            V+ V+     A    V
Sbjct: 562 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAV 620

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
            ++GQV++ GD      G R  +     P+L+E L+ +   +V  G  F+  LT  G V+
Sbjct: 621 TENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 679

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
           + G   + +LGHG       PK +  L+    V+ +AAG ++ LA+T +  V+S+GS
Sbjct: 680 SWGKGDNQRLGHGTEEHVRYPKLLEGLQG-KKVIDVAAGSTHCLALTEDSEVHSWGS 735



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 3899 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 3957

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 3958 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4016

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4017 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4062



 Score = 55.1 bits (131), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 730 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 775



 Score = 47.8 bits (112), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 67/137 (48%), Gaps = 3/137 (2%)

Query: 207  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            P   EAL  +   Q+  G      +T  G ++  G    G+LG G T    TP  +  ++
Sbjct: 3723 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQ 3782

Query: 267  EVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
             V    V + +G  + LA++  G VYS+G   +  LGHG +    +PR I++ R  GI V
Sbjct: 3783 HVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLR--GIEV 3840

Query: 326  VRVSAGDEHVVALDSSG 342
            V V+AG  H   + ++G
Sbjct: 3841 VDVAAGGAHSACVTAAG 3857



 Score = 40.8 bits (94), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 7/113 (6%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3699 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 3754

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G V
Sbjct: 3755 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 3807


>gi|164448576|ref|NP_001070362.2| probable E3 ubiquitin-protein ligase HERC4 [Bos taurus]
 gi|296472143|tpg|DAA14258.1| TPA: hect domain and RLD 4 [Bos taurus]
          Length = 1057

 Score = 87.8 bits (216), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 75/252 (29%), Positives = 120/252 (47%), Gaps = 10/252 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  Q+ AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL-RTQKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYV 344
           H  A + SSG +
Sbjct: 305 HTSAFVPSSGRI 316



 Score = 80.9 bits (198), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 61/226 (26%), Positives = 107/226 (47%), Gaps = 7/226 (3%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +QIAAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGI-PFMQIAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGV 263



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIVQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   I        +Q++A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 96/213 (45%), Gaps = 9/213 (4%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G +   +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQAS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           P+ I++    GI  ++++AG  H   L  SG +
Sbjct: 181 PQLIKSLL--GIPFMQIAAGGAHSFVLTLSGAI 211


>gi|426255638|ref|XP_004021455.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Ovis aries]
          Length = 1057

 Score = 87.8 bits (216), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 75/252 (29%), Positives = 120/252 (47%), Gaps = 10/252 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  Q+ AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL-RTQKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYV 344
           H  A + SSG +
Sbjct: 305 HTSAFVPSSGRI 316



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/226 (26%), Positives = 107/226 (47%), Gaps = 7/226 (3%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +QIAAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGI-PFMQIAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGV 263



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIVQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   I        +Q++A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342



 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 96/213 (45%), Gaps = 9/213 (4%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G +   +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQAS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           P+ I++    GI  ++++AG  H   L  SG +
Sbjct: 181 PQLIKSLL--GIPFMQIAAGGAHSFVLTLSGAI 211


>gi|198421783|ref|XP_002126864.1| PREDICTED: similar to MGC115292 protein [Ciona intestinalis]
          Length = 475

 Score = 87.8 bits (216), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 75/248 (30%), Positives = 117/248 (47%), Gaps = 32/248 (12%)

Query: 122 HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           H L+I+N  +V+S G + CG LGHG    +  S   I+   +  VV  +  +NH   + +
Sbjct: 112 HNLIITNEGNVYSWGRNECGQLGHG-NRVRYDSPKPIDSLQSYKVVNGATGKNHTLCLTE 170

Query: 181 SGQVFTCGDNSS--FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
           +G VF  GDN+      G+  TN P   P  + A KG P   V+ G  F+  L   G+V+
Sbjct: 171 NGDVFAFGDNAQGQLGLGNLSTNVP--SPTHI-AYKGNPIVDVSCGGEFSVILDCEGYVY 227

Query: 239 TCGSNTHGQLGH---------GDTLDRPTPKS---------------IAPLEEVGSVVQI 274
           + G   +GQLG+         G+ +     K+               + PL +V  +  I
Sbjct: 228 SFGCPEYGQLGNNTDGKYFASGNKMAFDNVKNAFRIPLWVEKLKGGQVLPLNDV-KITSI 286

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 334
           + G ++++A+     V+++G G    LGH EQ DE  PR +  F R G   V+V AG   
Sbjct: 287 SCGNNHVVALDSKKRVFTWGFGGYGRLGHSEQKDEHTPRLLTVFERAGRGAVQVYAGYSF 346

Query: 335 VVALDSSG 342
            +AL+  G
Sbjct: 347 SIALNEMG 354



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 58/179 (32%), Positives = 84/179 (46%), Gaps = 19/179 (10%)

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRP-----------IFRPRLVEALKGVPCKQVTAGL--N 226
            SG+V  CG  +++    R   R            +F+P   ++L G+   +V  G   N
Sbjct: 53  NSGEVLICG-GTNWSVNSRKKARKGDEKYENVGKNLFKPHRYKSLVGIKVSRVITGCCSN 111

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
               +T  G+V++ G N  GQLGHG+ +   +PK I  L+    VV  A G ++ L +T 
Sbjct: 112 HNLIITNEGNVYSWGRNECGQLGHGNRVRYDSPKPIDSLQSY-KVVNGATGKNHTLCLTE 170

Query: 287 NGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           NG V++FG  +   LG G     +  P  I     KG  +V VS G E  V LD  GYV
Sbjct: 171 NGDVFAFGDNAQGQLGLGNLSTNVPSPTHIAY---KGNPIVDVSCGGEFSVILDCEGYV 226



 Score = 58.2 bits (139), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 82/195 (42%), Gaps = 26/195 (13%)

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           NH   +   G V++ G N     GH +  R    P+ +++L+         G N T  LT
Sbjct: 111 NHNLIITNEGNVYSWGRNECGQLGHGNRVR-YDSPKPIDSLQSYKVVNGATGKNHTLCLT 169

Query: 233 IRGHVHTCGSNTHGQLGHGD-TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
             G V   G N  GQLG G+ + + P+P  IA   +   +V ++ G  + + +   G VY
Sbjct: 170 ENGDVFAFGDNAQGQLGLGNLSTNVPSPTHIA--YKGNPIVDVSCGGEFSVILDCEGYVY 227

Query: 292 SFG-----------SGSNFCLGHGEQHDELQ-----PRAIQTFR------RKGIHVVRVS 329
           SFG            G  F  G+    D ++     P  ++  +         + +  +S
Sbjct: 228 SFGCPEYGQLGNNTDGKYFASGNKMAFDNVKNAFRIPLWVEKLKGGQVLPLNDVKITSIS 287

Query: 330 AGDEHVVALDSSGYV 344
            G+ HVVALDS   V
Sbjct: 288 CGNNHVVALDSKKRV 302


>gi|440895825|gb|ELR47919.1| Putative E3 ubiquitin-protein ligase HERC4 [Bos grunniens mutus]
          Length = 1056

 Score = 87.8 bits (216), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 75/252 (29%), Positives = 120/252 (47%), Gaps = 10/252 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  Q+ AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL-RTQKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYV 344
           H  A + SSG +
Sbjct: 305 HTSAFVPSSGRI 316



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/226 (26%), Positives = 107/226 (47%), Gaps = 7/226 (3%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +QIAAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGI-PFMQIAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGV 263



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIVQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   I        +Q++A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 96/213 (45%), Gaps = 9/213 (4%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G +   +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQAS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           P+ I++    GI  ++++AG  H   L  SG +
Sbjct: 181 PQLIKSLL--GIPFMQIAAGGAHSFVLTLSGAI 211


>gi|397627901|gb|EJK68660.1| hypothetical protein THAOC_10141, partial [Thalassiosira oceanica]
          Length = 447

 Score = 87.8 bits (216), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 77/250 (30%), Positives = 119/250 (47%), Gaps = 39/250 (15%)

Query: 124 LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 183
            ++S+   F+ GS+  G LG G +T +      ++ P    V + +   N +A + + G 
Sbjct: 127 FILSDGRSFAVGSNKNGQLGVGSDTKETSKPVLLDLPP---VAKAALGNNFSALLTEGGD 183

Query: 184 VFTCG-----DNSSFCCGH-RDTNRPIFRPRLVEAL--KGVPCKQVTAGLNFTGFLTIRG 235
           ++TCG      N   C GH  DT RP   P LV +L   G   K V  G      LT  G
Sbjct: 184 IYTCGFGGSRMNGMGCLGHGDDTARP--APTLVNSLVEDGCYAKDVHVGEYSMTALTTEG 241

Query: 236 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG--SVVQIAAGPSYMLAVTGNGVVYSF 293
            V TCGS ++G+LG+ +T+D+     + P+E +G  ++ QIA G ++ LA++  GV+Y +
Sbjct: 242 EVLTCGSGSYGRLGNLETVDQ---LYLEPVELIGNDNISQIAGGSAFSLALSQEGVIYGW 298

Query: 294 GSGSNFCLGHGE------QHDELQPR---------AIQTF------RRKGIHVVRVSAGD 332
           G  +   LG G       Q   L PR         A++          +G  VV++SAG 
Sbjct: 299 GRNNEGQLGTGMGMSGECQPSLLVPRVCCCSNSVYAMEALPLPVEGNLEGKTVVKISAGK 358

Query: 333 EHVVALDSSG 342
            H  A+ S G
Sbjct: 359 AHSAAVTSEG 368



 Score = 71.6 bits (174), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 54/189 (28%), Positives = 85/189 (44%), Gaps = 11/189 (5%)

Query: 162 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
           + H+ ++    + +AF+L  G+ F  G N +   G     +   +P L++     P  + 
Sbjct: 112 SPHITRIDCGASGSAFILSDGRSFAVGSNKNGQLGVGSDTKETSKPVLLDL---PPVAKA 168

Query: 222 TAGLNFTGFLTIRGHVHTCG-----SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IA 275
             G NF+  LT  G ++TCG      N  G LGHGD   RP P  +  L E G   + + 
Sbjct: 169 ALGNNFSALLTEGGDIYTCGFGGSRMNGMGCLGHGDDTARPAPTLVNSLVEDGCYAKDVH 228

Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
            G   M A+T  G V + GSGS   LG+ E  D+L    ++      I   +++ G    
Sbjct: 229 VGEYSMTALTTEGEVLTCGSGSYGRLGNLETVDQLYLEPVELIGNDNIS--QIAGGSAFS 286

Query: 336 VALDSSGYV 344
           +AL   G +
Sbjct: 287 LALSQEGVI 295



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 58/252 (23%), Positives = 100/252 (39%), Gaps = 44/252 (17%)

Query: 120 RYHTLLISNSSVFSCG-----SSLCGVLGHGPETTQCVSFTRIN--FPSAAHVVQVSASE 172
            +  LL     +++CG      +  G LGHG +T +    T +N       +   V   E
Sbjct: 173 NFSALLTEGGDIYTCGFGGSRMNGMGCLGHGDDTARPAP-TLVNSLVEDGCYAKDVHVGE 231

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
                +   G+V TCG  S    G+ +T   ++    VE +      Q+  G  F+  L+
Sbjct: 232 YSMTALTTEGEVLTCGSGSYGRLGNLETVDQLYL-EPVELIGNDNISQIAGGSAFSLALS 290

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA-------------------PLE---EVGS 270
             G ++  G N  GQLG G  +      S+                    P+E   E  +
Sbjct: 291 QEGVIYGWGRNNEGQLGTGMGMSGECQPSLLVPRVCCCSNSVYAMEALPLPVEGNLEGKT 350

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           VV+I+AG ++  AVT  G ++++G            +  L P+   +       +V V+ 
Sbjct: 351 VVKISAGKAHSAAVTSEGELFTWG-----------MNLSLDPKLESSLLHT--KIVDVAC 397

Query: 331 GDEHVVALDSSG 342
           G+ + + LD +G
Sbjct: 398 GEYYTMVLDEAG 409



 Score = 47.0 bits (110), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 37/134 (27%), Positives = 60/134 (44%), Gaps = 10/134 (7%)

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGP 278
           ++  G + + F+   G     GSN +GQLG G DT +   P     L ++  V + A G 
Sbjct: 117 RIDCGASGSAFILSDGRSFAVGSNKNGQLGVGSDTKETSKPV----LLDLPPVAKAALGN 172

Query: 279 SYMLAVTGNGVVYSFGSGSNF-----CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++   +T  G +Y+ G G +      CLGHG+      P  + +    G +   V  G+ 
Sbjct: 173 NFSALLTEGGDIYTCGFGGSRMNGMGCLGHGDDTARPAPTLVNSLVEDGCYAKDVHVGEY 232

Query: 334 HVVALDSSGYVSLC 347
            + AL + G V  C
Sbjct: 233 SMTALTTEGEVLTC 246


>gi|390335480|ref|XP_782620.3| PREDICTED: uncharacterized protein LOC577290 [Strongylocentrotus
           purpuratus]
          Length = 861

 Score = 87.8 bits (216), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 79/244 (32%), Positives = 119/244 (48%), Gaps = 34/244 (13%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINF-PSAAHVVQVSASEN 173
           I+ G  HT +++    V + G+   G LG G + T   S  R+   P  + V  V+    
Sbjct: 71  ISCGSSHTAVVTGQDEVLTWGNGNSGQLGCGDKATH-TSPQRLRLGPHDSQVAGVACGSR 129

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGH--RDTN-----------RPIFRPRLVEALKGVPCKQ 220
           H    L++G+ ++CG+N     G+  R  N           RPI   ++V         Q
Sbjct: 130 HTVVWLENGRAYSCGNNFYVQLGYDFRVKNYKENQVLPHFLRPIMHRKVV---------Q 180

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           V+ G  FT FL   G V  CG+N  GQLG+G   +  +PK   PL+   +V++IAAG  +
Sbjct: 181 VSCGEKFTLFLFESGQVAGCGANNFGQLGNGTRAEMVSPK---PLDNPENVIRIAAGSCH 237

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            LAVT  G +Y++G G   C   G + D+L     +T RR   +VV V+ G  H +AL +
Sbjct: 238 SLAVTATGELYAWGMG-RAC---GSRRDDLLTPQRKTTRRS--NVVGVAGGSGHSLALTA 291

Query: 341 SGYV 344
           +G V
Sbjct: 292 NGTV 295



 Score = 64.7 bits (156), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 67/241 (27%), Positives = 109/241 (45%), Gaps = 40/241 (16%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++ G   TL L  +  V  CG++  G LG+G    + VS   ++ P   +V++++A  
Sbjct: 179 VQVSCGEKFTLFLFESGQVAGCGANNFGQLGNG-TRAEMVSPKPLDNPE--NVIRIAAGS 235

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF-- 230
            H+  V  +G+++  G      CG R       R  L+      P ++ T   N  G   
Sbjct: 236 CHSLAVTATGELYAWG--MGRACGSR-------RDDLL-----TPQRKTTRRSNVVGVAG 281

Query: 231 -------LTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAGPSYML 282
                  LT  G V++ G    GQLGHG+ +     P+++A     G V Q+A G SY  
Sbjct: 282 GSGHSLALTANGTVYSWGGGVDGQLGHGEDVQYLAQPEALADGALPGRVAQVACGDSYSA 341

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-----HVVRVSAGDEHVVA 337
           A+ G+G +Y +G  S+       Q D  QP + + +R  GI      +  V+ G  H  A
Sbjct: 342 ALLGDGSLYMWGKSSHVI-----QAD--QPSSQKVYRPVGISLNGRSIAMVTCGSWHTAA 394

Query: 338 L 338
           +
Sbjct: 395 I 395



 Score = 38.9 bits (89), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 62/134 (46%), Gaps = 7/134 (5%)

Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
           K ++ G + T  +T +  V T G+   GQLG GD     +P+ +        V  +A G 
Sbjct: 69  KHISCGSSHTAVVTGQDEVLTWGNGNSGQLGCGDKATHTSPQRLRLGPHDSQVAGVACGS 128

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHG---EQHDELQPRAIQTFRRKGIH--VVRVSAGDE 333
            + +    NG  YS G+     LG+    + + E Q   +  F R  +H  VV+VS G++
Sbjct: 129 RHTVVWLENGRAYSCGNNFYVQLGYDFRVKNYKENQ--VLPHFLRPIMHRKVVQVSCGEK 186

Query: 334 HVVALDSSGYVSLC 347
             + L  SG V+ C
Sbjct: 187 FTLFLFESGQVAGC 200


>gi|293346825|ref|XP_001064216.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Rattus
           norvegicus]
          Length = 1149

 Score = 87.8 bits (216), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 73/237 (30%), Positives = 117/237 (49%), Gaps = 11/237 (4%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGH-GPETTQCVSFTRINFPSAAHVVQVSAS 171
           ++  +G  H+LL+ SN  V+SCG +  G LG   P++T+      I   S  H+  VS  
Sbjct: 182 LKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPE--PIQALSTVHIDLVSCG 239

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           + H+  V   G+VFT G  S    G  ++    F P  + +L G+   QV+ G   +  L
Sbjct: 240 KEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLAL 299

Query: 232 TIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           +  G V + GSN  GQLG G+ L  + +P+ +  LE +  + Q+AAG ++  A++  G  
Sbjct: 300 SEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGI-PLAQVAAGGTHSFALSLMGTS 358

Query: 291 YSFG---SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           + +G   SG     G+  +    +P +I     K ++VV +S G EH   L   G V
Sbjct: 359 FGWGNNRSGQLALSGNSAKEQIYKPHSIGAL--KTLNVVYISCGYEHTSVLTEDGQV 413



 Score = 67.4 bits (163), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 98/189 (51%), Gaps = 6/189 (3%)

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           R+   +   +++ ++ E H+  +  + +V++CGDNS    G + + +   RP  ++AL  
Sbjct: 172 RLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQK-SPQSTKRPEPIQALST 230

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQI 274
           V    V+ G   +  +  +G V T G+ + GQLG G++ +    P  I  L  +  ++Q+
Sbjct: 231 VHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGI-KIIQV 289

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDE 333
           + G  + LA++ +G V+S+GS     LG G     +  P+ +++   +GI + +V+AG  
Sbjct: 290 SCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSL--EGIPLAQVAAGGT 347

Query: 334 HVVALDSSG 342
           H  AL   G
Sbjct: 348 HSFALSLMG 356



 Score = 61.2 bits (147), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 68/140 (48%), Gaps = 4/140 (2%)

Query: 206 RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 265
           +PR +EA  G+   +  +G   +  L     V++CG N+ GQLG         P+ I  L
Sbjct: 169 QPRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEPIQAL 228

Query: 266 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD-ELQPRAIQTFRRKGIH 324
             V  +  ++ G  + +AV   G V+++G+GS   LG GE  +    P  I +    GI 
Sbjct: 229 STV-HIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSL--AGIK 285

Query: 325 VVRVSAGDEHVVALDSSGYV 344
           +++VS G  H +AL   G V
Sbjct: 286 IIQVSCGHYHSLALSEDGQV 305



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 82/187 (43%), Gaps = 6/187 (3%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++ G YH+L +S +  VFS GS+  G LG G       S  ++       + QV+A  
Sbjct: 287 IQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGG 346

Query: 173 NHAAFVLQSGQVFTCGDNSS--FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            H+  +   G  F  G+N S             I++P  + ALK +    ++ G   T  
Sbjct: 347 THSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSV 406

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA-VTGNGV 289
           LT  G V T G ++  QL H     R  P+ I  +   G V QI  G  + +A V   G 
Sbjct: 407 LTEDGQVFTFGGSSSEQLQHSPRSGRGGPQLIEGIG--GHVSQIECGSYHTIAYVYTTGQ 464

Query: 290 VYSFGSG 296
           V S G G
Sbjct: 465 VVSLGRG 471


>gi|426255640|ref|XP_004021456.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Ovis aries]
          Length = 1049

 Score = 87.8 bits (216), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 75/252 (29%), Positives = 120/252 (47%), Gaps = 10/252 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  Q+ AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL-RTQKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYV 344
           H  A + SSG +
Sbjct: 305 HTSAFVPSSGRI 316



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/226 (26%), Positives = 107/226 (47%), Gaps = 7/226 (3%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +QIAAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGI-PFMQIAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGV 263



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIVQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   I        +Q++A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342



 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 96/213 (45%), Gaps = 9/213 (4%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G +   +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQAS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           P+ I++    GI  ++++AG  H   L  SG +
Sbjct: 181 PQLIKSLL--GIPFMQIAAGGAHSFVLTLSGAI 211


>gi|255572207|ref|XP_002527043.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223533605|gb|EEF35343.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1100

 Score = 87.8 bits (216), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 56/177 (31%), Positives = 94/177 (53%), Gaps = 7/177 (3%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  ++    HAA V + G+VF+ G+ S    GH   +  +  P+L+++L  +  + V  G
Sbjct: 306 VQNIACGGRHAALVTKQGEVFSWGEESGGRLGH-GVDSDVLHPKLIDSLSNINIELVACG 364

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYM 281
              T  +T+ G ++T G  T+  G LGHG+ +    PK +  PLE +  V  I+ GP + 
Sbjct: 365 EYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGI-HVSSISCGPWHT 423

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             VT +G +++FG G+   LGHG++     PR +++   KG+  VR + G  H  A+
Sbjct: 424 AVVTSSGQLFTFGDGTFGVLGHGDRKSVSIPREVESL--KGLRTVRAACGVWHTAAV 478



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 78/245 (31%), Positives = 111/245 (45%), Gaps = 21/245 (8%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G YHT  ++ S     +  G+   G+LGHG E +  V   R+N P    HV  +S  
Sbjct: 361 VACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVP-KRVNGPLEGIHVSSISCG 419

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H A V  SGQ+FT GD +    GH D  + +  PR VE+LKG+   +   G+  T  +
Sbjct: 420 PWHTAVVTSSGQLFTFGDGTFGVLGHGD-RKSVSIPREVESLKGLRTVRAACGVWHTAAV 478

Query: 232 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
                          G + T G    G+LGHGD   +  P  +A L E  +  Q+A G S
Sbjct: 479 VEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEP-NFCQVACGHS 537

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
             +A+T +G VY+ GS     LG+  Q D   P  ++    K   V  ++ G  HV  L 
Sbjct: 538 LTVALTTSGHVYTMGSPVYGQLGN-PQADGKLPNRVEGRLSKSF-VEEIACGAYHVAVLT 595

Query: 340 SSGYV 344
           S   V
Sbjct: 596 SKTEV 600



 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 68/225 (30%), Positives = 103/225 (45%), Gaps = 18/225 (8%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           I+ G +HT ++++S  +F+ G    GVLGHG    + VS  R +        V+ +    
Sbjct: 416 ISCGPWHTAVVTSSGQLFTFGDGTFGVLGHGDR--KSVSIPREVESLKGLRTVRAACGVW 473

Query: 174 HAAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
           H A V++            SG++FT GD      GH D    +  P  V AL      QV
Sbjct: 474 HTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV-PTCVAALVEPNFCQV 532

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
             G + T  LT  GHV+T GS  +GQLG+    D   P  +        V +IA G  ++
Sbjct: 533 ACGHSLTVALTTSGHVYTMGSPVYGQLGNPQA-DGKLPNRVEGRLSKSFVEEIACGAYHV 591

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
             +T    VY++G G+N  LGHG+  D   P  ++  + K +  +
Sbjct: 592 AVLTSKTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSI 636



 Score = 68.6 bits (166), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 66/240 (27%), Positives = 107/240 (44%), Gaps = 18/240 (7%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           GR+  L+     VFS G    G LGHG + +  +    I+  S  ++  V+  E H   V
Sbjct: 313 GRHAALVTKQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDSLSNINIELVACGEYHTCAV 371

Query: 179 LQSGQVFTCGDNS-SF-CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             SG ++T GD + +F   GH +        R+   L+G+    ++ G   T  +T  G 
Sbjct: 372 TLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSSGQ 431

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT----------- 285
           + T G  T G LGHGD      P+ +  L+ +   V+ A G  +  AV            
Sbjct: 432 LFTFGDGTFGVLGHGDRKSVSIPREVESLKGL-RTVRAACGVWHTAAVVEVMVGNSSSSN 490

Query: 286 -GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             +G ++++G G    LGHG++  +L P  +        +  +V+ G    VAL +SG+V
Sbjct: 491 CSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEP--NFCQVACGHSLTVALTTSGHV 548



 Score = 58.5 bits (140), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 71/140 (50%), Gaps = 4/140 (2%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E+   +  + +  G      +T +G V + G  + G+LGHG   D   PK I  L 
Sbjct: 295 PKALESTVVLDVQNIACGGRHAALVTKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDSLS 354

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPRAIQTFRRKGIH 324
            + ++  +A G  +  AVT +G +Y++G G+ NF  LGHG +     P+ +     +GIH
Sbjct: 355 NI-NIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNG-PLEGIH 412

Query: 325 VVRVSAGDEHVVALDSSGYV 344
           V  +S G  H   + SSG +
Sbjct: 413 VSSISCGPWHTAVVTSSGQL 432



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 52/199 (26%), Positives = 84/199 (42%), Gaps = 22/199 (11%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQC 151
           R +R    V H++ +VE       +  G   +   S+  +F+ G    G LGHG +  + 
Sbjct: 464 RTVRAACGVWHTAAVVE-------VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKL 516

Query: 152 V-----SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR 206
           V     +    NF       QV+   +    +  SG V+T G       G+   +  +  
Sbjct: 517 VPTCVAALVEPNF------CQVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKL-- 568

Query: 207 PRLVEA-LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 265
           P  VE  L     +++  G      LT +  V+T G   +G+LGHGDT DR  P  +  L
Sbjct: 569 PNRVEGRLSKSFVEEIACGAYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNFPSLVEAL 628

Query: 266 EEVGSVVQIAAGPSYMLAV 284
           ++   V  IA G ++  A+
Sbjct: 629 KD-KQVKSIACGTNFTAAI 646


>gi|126330876|ref|XP_001375975.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Monodelphis
           domestica]
          Length = 1016

 Score = 87.8 bits (216), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 118/240 (49%), Gaps = 16/240 (6%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVS 169
           +Q   G  H+LL+ S+ +V+SCG++ CG LG      +C    R   I       +V VS
Sbjct: 40  LQAACGERHSLLLLSDGTVWSCGNNSCGQLGR----KRCQKHGRPAQIQALETQDIVSVS 95

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
             + H+  + + G+VF+ G  S    G R+  +    P+ ++ L      QV+ G   + 
Sbjct: 96  CGKEHSLAICKEGRVFSWGSGSDGQLGIREFKKLSSIPKKIDELSSFKIIQVSCGHYHSI 155

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
            L   G V + G N HGQLG G+ +  + +P+ +  L+ +  + Q+AAG ++  A++ +G
Sbjct: 156 ALAQDGRVFSWGKNNHGQLGLGENVPSQASPQWVKSLDGI-PLAQVAAGGAHSFALSFSG 214

Query: 289 VVYSFG---SGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             Y +G   +G     G  E  +++ +P +I   +R  + V  +S GDEH   L   G V
Sbjct: 215 TSYGWGRNNAGQLALSGKKESAEQISKPFSIGELKR--LQVTYISCGDEHTAVLTQDGKV 272



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 65/235 (27%), Positives = 99/235 (42%), Gaps = 19/235 (8%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQ 150
           R  + L S+    D + +S   +Q++ G YH++ L  +  VFS G +  G LG G     
Sbjct: 124 REFKKLSSIPKKIDEL-SSFKIIQVSCGHYHSIALAQDGRVFSWGKNNHGQLGLGENVPS 182

Query: 151 CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSS---FCCGHRDTNRPIFRP 207
             S   +       + QV+A   H+  +  SG  +  G N++      G +++   I +P
Sbjct: 183 QASPQWVKSLDGIPLAQVAAGGAHSFALSFSGTSYGWGRNNAGQLALSGKKESAEQISKP 242

Query: 208 RLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE 267
             +  LK +    ++ G   T  LT  G V T GSN  GQLG         P+ +   + 
Sbjct: 243 FSIGELKRLQVTYISCGDEHTAVLTQDGKVFTFGSNDSGQLGRQLISGMKGPQVV---DS 299

Query: 268 VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQP----RAIQTF 318
             S  QIA G  + LA       YS  +G     G G Q D + P     A+Q F
Sbjct: 300 AVSFSQIACGSYHTLA-------YSCTTGQVISFGCGSQRDPIGPLQPGDAVQNF 347


>gi|357443735|ref|XP_003592145.1| Lateral signaling target protein-like protein [Medicago truncatula]
 gi|355481193|gb|AES62396.1| Lateral signaling target protein-like protein [Medicago truncatula]
          Length = 1238

 Score = 87.8 bits (216), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 60/177 (33%), Positives = 92/177 (51%), Gaps = 7/177 (3%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V+Q++    HAA V + G++FT G+ S    GH    + + +P LVEAL       V  G
Sbjct: 344 VLQIACGVKHAALVTRQGEMFTWGEESGGRLGH-GVGKNVVQPCLVEALASSTVDFVACG 402

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
              T  +T+ G ++T G  TH  G LGHG  +    PK IA PLE +  V  +  GP + 
Sbjct: 403 EFHTCAVTMAGEIYTWGDGTHNAGLLGHGTDVSHWIPKRIAGPLEGL-QVAFVTCGPWHT 461

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             +T  G +++FG G+   LGHG++ +   PR +++    G+  V V+ G  H  A+
Sbjct: 462 ALITSTGQLFTFGDGTFGVLGHGDRENISYPREVESL--SGLRTVSVACGVWHTAAI 516



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 71/243 (29%), Positives = 112/243 (46%), Gaps = 19/243 (7%)

Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           +T G +HT LI S   +F+ G    GVLGHG    + +S+ R +   S    V V+    
Sbjct: 454 VTCGPWHTALITSTGQLFTFGDGTFGVLGHGDR--ENISYPREVESLSGLRTVSVACGVW 511

Query: 174 HAAFVLQ-----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           H A +++           SG++FT GD      GH D +  +  P  + AL      ++ 
Sbjct: 512 HTAAIVEVIVTQSSASISSGKLFTWGDGDKNRLGHGDKDARL-EPTCISALIDYNFHRIA 570

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
            G + T  LT  G V T GS  +GQLG+  + D   P  +        V +IA G  ++ 
Sbjct: 571 CGHSLTVGLTTSGRVFTMGSTVYGQLGNPQS-DGKLPCLVEDKLAGECVEEIACGAYHVT 629

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            +T    VY++G G+N  LGHG+  D   P  ++  + +  HV  ++ G  +  A+    
Sbjct: 630 VLTSRNEVYTWGKGANGRLGHGDVEDRKTPTLVEALKDR--HVKYIACGSNYSAAICLHK 687

Query: 343 YVS 345
           +VS
Sbjct: 688 WVS 690



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 43/157 (27%), Positives = 72/157 (45%), Gaps = 8/157 (5%)

Query: 190 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
           N S+C    D    I  P+ +E+   +   Q+  G+     +T +G + T G  + G+LG
Sbjct: 320 NVSYCSPRTD----ILLPKPLESNVVLDVLQIACGVKHAALVTRQGEMFTWGEESGGRLG 375

Query: 250 HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQH 307
           HG   +   P  +  L    +V  +A G  +  AVT  G +Y++G G++    LGHG   
Sbjct: 376 HGVGKNVVQPCLVEALAS-STVDFVACGEFHTCAVTMAGEIYTWGDGTHNAGLLGHGTDV 434

Query: 308 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
               P+ I     +G+ V  V+ G  H   + S+G +
Sbjct: 435 SHWIPKRI-AGPLEGLQVAFVTCGPWHTALITSTGQL 470


>gi|191961780|ref|NP_001122122.1| HECT and RLD domain containing E3 ubiquitin protein ligase 4
           [Xenopus (Silurana) tropicalis]
 gi|189441713|gb|AAI67508.1| LOC100036667 protein [Xenopus (Silurana) tropicalis]
          Length = 1049

 Score = 87.8 bits (216), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 108/231 (46%), Gaps = 5/231 (2%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           ++ G  HTL +++   VFS G ++ G +G             I   S   +VQV+   +H
Sbjct: 89  VSCGEAHTLALNDKGQVFSWGHAVYGQIGLSTAEEYIRVPRNIKSLSDVQIVQVACGHHH 148

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           +  + +   +F+ G N     G     +    PR +++L G+P   + AG   +  LTI 
Sbjct: 149 SLALSKDSDIFSWGQNQYGQLGLGLEIKKECAPRHIKSLSGIPFAHIAAGGGHSFALTIS 208

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G +   G N  GQLG  D  DR  P  +  L     ++ I  G  +  A+T  G V++FG
Sbjct: 209 GAIFGWGRNKFGQLGLTDETDRNVPALLKSLRS-QKIIHICCGEDHTAALTKEGGVFTFG 267

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYV 344
           +G    LGH   + E+ PR +  F   G  V +++ G +H +A + SSG +
Sbjct: 268 AGGYGQLGHNSTNHEVNPRKV--FELMGSIVTQIACGRQHTLAFVPSSGRI 316



 Score = 79.0 bits (193), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 102/207 (49%), Gaps = 8/207 (3%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G +H+L +S +S +FS G +  G LG G E  +  +   I   S      ++A  
Sbjct: 140 VQVACGHHHSLALSKDSDIFSWGQNQYGQLGLGLEIKKECAPRHIKSLSGIPFAHIAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
            H+  +  SG +F  G N     G  D T+R +  P L+++L+      +  G + T  L
Sbjct: 200 GHSFALTISGAIFGWGRNKFGQLGLTDETDRNV--PALLKSLRSQKIIHICCGEDHTAAL 257

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGV 289
           T  G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  + LA V  +G 
Sbjct: 258 TKEGGVFTFGAGGYGQLGHNSTNHEVNPRKV--FELMGSIVTQIACGRQHTLAFVPSSGR 315

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQ 316
           +YSFG G N  LG G   +   P  ++
Sbjct: 316 IYSFGLGGNGQLGTGSTINRKSPFTVK 342



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 66/213 (30%), Positives = 97/213 (45%), Gaps = 9/213 (4%)

Query: 135 GSSLCGVLGHGPETTQCV-SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V    R +F    +V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNTSFGQLGLGGIDEEVVLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 253
             GH  + R   +P  V AL       V+ G   T  L  +G V + G   +GQ+G    
Sbjct: 65  QLGHDKSRR---KPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAVYGQIGLSTA 121

Query: 254 LDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
            +    P++I  L +V  +VQ+A G  + LA++ +  ++S+G      LG G E   E  
Sbjct: 122 EEYIRVPRNIKSLSDV-QIVQVACGHHHSLALSKDSDIFSWGQNQYGQLGLGLEIKKECA 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           PR I++    GI    ++AG  H  AL  SG +
Sbjct: 181 PRHIKSL--SGIPFAHIAAGGGHSFALTISGAI 211


>gi|392347372|ref|XP_342701.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Rattus
           norvegicus]
          Length = 1185

 Score = 87.8 bits (216), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 73/237 (30%), Positives = 117/237 (49%), Gaps = 11/237 (4%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGH-GPETTQCVSFTRINFPSAAHVVQVSAS 171
           ++  +G  H+LL+ SN  V+SCG +  G LG   P++T+      I   S  H+  VS  
Sbjct: 182 LKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPE--PIQALSTVHIDLVSCG 239

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           + H+  V   G+VFT G  S    G  ++    F P  + +L G+   QV+ G   +  L
Sbjct: 240 KEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLAL 299

Query: 232 TIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           +  G V + GSN  GQLG G+ L  + +P+ +  LE +  + Q+AAG ++  A++  G  
Sbjct: 300 SEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGI-PLAQVAAGGTHSFALSLMGTS 358

Query: 291 YSFG---SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           + +G   SG     G+  +    +P +I     K ++VV +S G EH   L   G V
Sbjct: 359 FGWGNNRSGQLALSGNSAKEQIYKPHSIGAL--KTLNVVYISCGYEHTSVLTEDGQV 413



 Score = 67.4 bits (163), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 98/189 (51%), Gaps = 6/189 (3%)

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           R+   +   +++ ++ E H+  +  + +V++CGDNS    G + + +   RP  ++AL  
Sbjct: 172 RLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQK-SPQSTKRPEPIQALST 230

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQI 274
           V    V+ G   +  +  +G V T G+ + GQLG G++ +    P  I  L  +  ++Q+
Sbjct: 231 VHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGI-KIIQV 289

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDE 333
           + G  + LA++ +G V+S+GS     LG G     +  P+ +++   +GI + +V+AG  
Sbjct: 290 SCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSL--EGIPLAQVAAGGT 347

Query: 334 HVVALDSSG 342
           H  AL   G
Sbjct: 348 HSFALSLMG 356



 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 68/140 (48%), Gaps = 4/140 (2%)

Query: 206 RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 265
           +PR +EA  G+   +  +G   +  L     V++CG N+ GQLG         P+ I  L
Sbjct: 169 QPRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEPIQAL 228

Query: 266 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD-ELQPRAIQTFRRKGIH 324
             V  +  ++ G  + +AV   G V+++G+GS   LG GE  +    P  I +    GI 
Sbjct: 229 STV-HIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSL--AGIK 285

Query: 325 VVRVSAGDEHVVALDSSGYV 344
           +++VS G  H +AL   G V
Sbjct: 286 IIQVSCGHYHSLALSEDGQV 305



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 82/187 (43%), Gaps = 6/187 (3%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++ G YH+L +S +  VFS GS+  G LG G       S  ++       + QV+A  
Sbjct: 287 IQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGG 346

Query: 173 NHAAFVLQSGQVFTCGDNSS--FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            H+  +   G  F  G+N S             I++P  + ALK +    ++ G   T  
Sbjct: 347 THSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSV 406

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA-VTGNGV 289
           LT  G V T G ++  QL H     R  P+ I  +   G V QI  G  + +A V   G 
Sbjct: 407 LTEDGQVFTFGGSSSEQLQHSPRSGRGGPQLIEGIG--GHVSQIECGSYHTIAYVYTTGQ 464

Query: 290 VYSFGSG 296
           V S G G
Sbjct: 465 VVSLGRG 471


>gi|395741726|ref|XP_003777632.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Pongo
           abelii]
          Length = 1049

 Score = 87.8 bits (216), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 120/252 (47%), Gaps = 10/252 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYV 344
           H  A + SSG +
Sbjct: 305 HTSAFVPSSGRI 316



 Score = 78.2 bits (191), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 107/226 (47%), Gaps = 7/226 (3%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGV 263



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 98/206 (47%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G  H+L +S +S VF  G +  G LG G +  +  S   +        +QV+A  
Sbjct: 140 VQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 95/213 (44%), Gaps = 9/213 (4%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           P+ +++    GI  ++V+AG  H   L  SG +
Sbjct: 181 PQLLKSLL--GIPFMQVAAGGAHSFVLTLSGAI 211


>gi|17510153|ref|NP_490834.1| Protein HERC-1 [Caenorhabditis elegans]
 gi|351051254|emb|CCD73459.1| Protein HERC-1 [Caenorhabditis elegans]
          Length = 1019

 Score = 87.8 bits (216), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 73/268 (27%), Positives = 118/268 (44%), Gaps = 48/268 (17%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +T G  HT+ ++ +  ++S GS++ G LG G  T    S   +++ S+A ++Q+SA  +H
Sbjct: 46  VTCGEQHTVFLTKDGKMWSVGSNMDGQLGRGSRTEGSFSIYPVSWTSSAKIIQISAGRSH 105

Query: 175 AAFVLQSGQVFTCGDNSS------------------------------------------ 192
              V   G+VF  G N                                            
Sbjct: 106 TVSVTDDGRVFAWGSNEHGQLGMESKFTWQGTPRRVQEINDIVQVASGSNHCIALDEGGR 165

Query: 193 -FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG 251
            F  G +   R I RP  VE L GVP  +V AG      L+  G V T G N  G+LG  
Sbjct: 166 VFVWGEQADGRCIHRPEPVEQLSGVPIVRVLAGARHCLALSASGAVFTWGQNNSGELGID 225

Query: 252 DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE-L 310
           D   + + + +  ++ +G VV+ A G ++ + +T  G  +SFGS +    G G++ ++  
Sbjct: 226 DLRPQTSVQHVHQMDGLG-VVEAACGDNHTVLLTHCGRTFSFGSDALGQCGFGKKVEKRT 284

Query: 311 QPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            P A+      G HV R++AG  H +A+
Sbjct: 285 NPTAVSDL--IGSHVTRIAAGACHTIAI 310



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 86/182 (47%), Gaps = 15/182 (8%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  V+  E H  F+ + G++++ G N     G        F    V         Q++AG
Sbjct: 43  VTSVTCGEQHTVFLTKDGKMWSVGSNMDGQLGRGSRTEGSFSIYPVSWTSSAKIIQISAG 102

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            + T  +T  G V   GSN HGQLG       + TP+ +   +E+  +VQ+A+G ++ +A
Sbjct: 103 RSHTVSVTDDGRVFAWGSNEHGQLGMESKFTWQGTPRRV---QEINDIVQVASGSNHCIA 159

Query: 284 VTGNGVVYSFGSGSN-FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           +   G V+ +G  ++  C+   E  ++L           G+ +VRV AG  H +AL +SG
Sbjct: 160 LDEGGRVFVWGEQADGRCIHRPEPVEQL----------SGVPIVRVLAGARHCLALSASG 209

Query: 343 YV 344
            V
Sbjct: 210 AV 211



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 84/292 (28%), Positives = 123/292 (42%), Gaps = 72/292 (24%)

Query: 109 TSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ 167
           +SA  +QI+ GR HT+ +++   VF+ GS+  G LG   + T   +  R+       +VQ
Sbjct: 92  SSAKIIQISAGRSHTVSVTDDGRVFAWGSNEHGQLGMESKFTWQGTPRRVQ--EINDIVQ 149

Query: 168 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV------ 221
           V++  NH   + + G+VF  G+ +   C HR        P  VE L GVP  +V      
Sbjct: 150 VASGSNHCIALDEGGRVFVWGEQADGRCIHR--------PEPVEQLSGVPIVRVLAGARH 201

Query: 222 -----------TAGLNFTGFLTIRG--------HVH----------TCGSN-----TH-- 245
                      T G N +G L I          HVH           CG N     TH  
Sbjct: 202 CLALSASGAVFTWGQNNSGELGIDDLRPQTSVQHVHQMDGLGVVEAACGDNHTVLLTHCG 261

Query: 246 ----------GQLGHGDTLDRPT-PKSIAPLEEVGS-VVQIAAGPSYMLAVTGNGVVYSF 293
                     GQ G G  +++ T P +++ L  +GS V +IAAG  + +A+   G  Y F
Sbjct: 262 RTFSFGSDALGQCGFGKKVEKRTNPTAVSDL--IGSHVTRIAAGACHTIAIC-KGAPYPF 318

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVS 345
           G  S+  LG+G+   +  PR          HV  V AG      + SSG + 
Sbjct: 319 GLNSSGQLGNGKIMTQSTPRKTDELD----HVTGVFAGYHQTFFVRSSGTIE 366



 Score = 64.3 bits (155), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 54/170 (31%), Positives = 83/170 (48%), Gaps = 13/170 (7%)

Query: 182 GQVFTCGDNSSFCCGHRDTNRPIFRP-RLVEA---LKGVPCKQVTAGLNFTGFLTIRGHV 237
            ++  CG       G R +   I  P R++ A   + G     VT G   T FLT  G +
Sbjct: 3   AELLGCGHTGEGQLGVRLSESTIQVPERIIGAPNDMDGTAVTSVTCGEQHTVFLTKDGKM 62

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS--VVQIAAGPSYMLAVTGNGVVYSFGS 295
            + GSN  GQLG G   +     SI P+    S  ++QI+AG S+ ++VT +G V+++GS
Sbjct: 63  WSVGSNMDGQLGRGSRTEGSF--SIYPVSWTSSAKIIQISAGRSHTVSVTDDGRVFAWGS 120

Query: 296 GSNFCLGHGEQHD-ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             +  LG   +   +  PR +Q        +V+V++G  H +ALD  G V
Sbjct: 121 NEHGQLGMESKFTWQGTPRRVQEIN----DIVQVASGSNHCIALDEGGRV 166


>gi|242016591|ref|XP_002428862.1| X-linked retinitis pigmentosa GTPase regulator, putative [Pediculus
           humanus corporis]
 gi|212513605|gb|EEB16124.1| X-linked retinitis pigmentosa GTPase regulator, putative [Pediculus
           humanus corporis]
          Length = 516

 Score = 87.8 bits (216), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 116/236 (49%), Gaps = 9/236 (3%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCV-SFTRINFPSAAHVVQVSAS 171
           + +  G+ HTL+ +  + +F+ G +  G LG G    + V      +     +++ +SA 
Sbjct: 91  IHVACGKSHTLISTECNKIFAFGCNSDGQLGVGDLDDRWVPQMISTDLEKTNNIIALSAG 150

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
            +H+AF+ + G V+  GDNS   CG ++ N  +  PR +E     P   ++ G   T F+
Sbjct: 151 CHHSAFLTEEGSVYIWGDNSDGQCGIKNENY-LLNPRKIEFQN--PINSISCGYYHTAFI 207

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V+T G + +G+LG  D L    P+ +  L+E  + + +  G S+ + +T +G  Y
Sbjct: 208 SL-GKVYTFGEDDNGKLGRSDKLPNDVPEGV-ELDE--NCISVKCGGSHTIILTESGKAY 263

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSLC 347
           +FGS  +  LG G    E        F  + ++++ V+ G+ H   L   G +  C
Sbjct: 264 AFGSNFSGQLGLGNFETEFSIPQRVNFTDENVNLIYVTCGESHSAFLTDEGKLYTC 319



 Score = 64.3 bits (155), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 76/153 (49%), Gaps = 2/153 (1%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V ++S  + H A V +SG+VF  G N     G   T + + +P  +++LK      V  G
Sbjct: 38  VKEISCGDEHTALVCKSGRVFLFGKNDFGQLGFGHT-KIVNKPSCLKSLKPFQSIHVACG 96

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLA 283
            + T   T    +   G N+ GQLG GD  DR  P+ I+  LE+  +++ ++AG  +   
Sbjct: 97  KSHTLISTECNKIFAFGCNSDGQLGVGDLDDRWVPQMISTDLEKTNNIIALSAGCHHSAF 156

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
           +T  G VY +G  S+   G   ++  L PR I+
Sbjct: 157 LTEEGSVYIWGDNSDGQCGIKNENYLLNPRKIE 189



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 44/150 (29%), Positives = 70/150 (46%), Gaps = 13/150 (8%)

Query: 206 RPRLVEAL------KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT--LDRP 257
           + R  E L      +  P K+++ G   T  +   G V   G N  GQLG G T  +++P
Sbjct: 20  KSRFAEDLSSHFFVRNDPVKEISCGDEHTALVCKSGRVFLFGKNDFGQLGFGHTKIVNKP 79

Query: 258 T-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
           +  KS+ P + +     +A G S+ L  T    +++FG  S+  LG G+  D   P+ I 
Sbjct: 80  SCLKSLKPFQSI----HVACGKSHTLISTECNKIFAFGCNSDGQLGVGDLDDRWVPQMIS 135

Query: 317 TFRRKGIHVVRVSAGDEHVVALDSSGYVSL 346
           T   K  +++ +SAG  H   L   G V +
Sbjct: 136 TDLEKTNNIIALSAGCHHSAFLTEEGSVYI 165



 Score = 54.7 bits (130), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 61/122 (50%), Gaps = 6/122 (4%)

Query: 107 VETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA-AH 164
           VE     + +  G  HT++++ S   ++ GS+  G LG G   T+     R+NF     +
Sbjct: 237 VELDENCISVKCGGSHTIILTESGKAYAFGSNFSGQLGLGNFETEFSIPQRVNFTDENVN 296

Query: 165 VVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           ++ V+  E+H+AF+   G+++TCGD  N   C  + D +  I  P  +E  K   C  V+
Sbjct: 297 LIYVTCGESHSAFLTDEGKLYTCGDGRNGKLC--NEDESTNICTPTTIEMFKSFFCTYVS 354

Query: 223 AG 224
            G
Sbjct: 355 CG 356



 Score = 40.8 bits (94), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 65/153 (42%), Gaps = 13/153 (8%)

Query: 116 ITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV----VQVSAS 171
           I+ G YHT  IS   V++ G    G LG   +    V       P    +    + V   
Sbjct: 197 ISCGYYHTAFISLGKVYTFGEDDNGKLGRSDKLPNDV-------PEGVELDENCISVKCG 249

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE-ALKGVPCKQVTAGLNFTGF 230
            +H   + +SG+ +  G N S   G  +       P+ V    + V    VT G + + F
Sbjct: 250 GSHTIILTESGKAYAFGSNFSGQLGLGNFETEFSIPQRVNFTDENVNLIYVTCGESHSAF 309

Query: 231 LTIRGHVHTCGSNTHGQLGHGD-TLDRPTPKSI 262
           LT  G ++TCG   +G+L + D + +  TP +I
Sbjct: 310 LTDEGKLYTCGDGRNGKLCNEDESTNICTPTTI 342


>gi|383453805|ref|YP_005367794.1| hypothetical protein COCOR_01791, partial [Corallococcus
           coralloides DSM 2259]
 gi|380728287|gb|AFE04289.1| hypothetical protein COCOR_01791 [Corallococcus coralloides DSM
           2259]
          Length = 827

 Score = 87.4 bits (215), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 74/231 (32%), Positives = 111/231 (48%), Gaps = 15/231 (6%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G+ H+L L+++ +V++ G +    LG G E     S T +  P  A V  ++A EN 
Sbjct: 482 VAAGKTHSLALLADGTVWAWGDNSFSALGLGDE--PGASPTPVQVPKLAGVRSLAAGENS 539

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFLTI 233
           +  VL +G V   G       G    +  IF+ P  +  L G+    V  G  ++  L  
Sbjct: 540 SLAVLANGTVMAWGYGLFGQLGSESAS--IFQIPEPIFGLSGITA--VAMGHWYSLALRE 595

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V + G N  GQLG G T +RP P  +A L +V     IAAG S+ LA+  +G V+++
Sbjct: 596 DGTVWSWGYNASGQLGDGTTDERPRPGQVAGLTQV---TAIAAGASHALALRADGTVWAW 652

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           GS +   LG G Q     P  +Q        V+ V+AG+ H +AL   G V
Sbjct: 653 GSNALGTLGDGTQTSRSTPVQVQGL----TGVIAVAAGEYHSLALREDGTV 699



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 60/202 (29%), Positives = 99/202 (49%), Gaps = 10/202 (4%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G  H L L ++ +V++ GS+  G LG G +T++    T +       V+ V+A E H
Sbjct: 633 IAAGASHALALRADGTVWAWGSNALGTLGDGTQTSRS---TPVQVQGLTGVIAVAAGEYH 689

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           +  + + G V++ G+N+    G   T      P  V  L GV  +++ AG          
Sbjct: 690 SLALREDGTVWSWGNNNEGQLGDV-TASSRQSPGQVPGLAGV--QRIAAGEKHALAAVEG 746

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G +   G NT GQLG G+  +  +   IA L    +   IAAG ++ LAV  +G V+++G
Sbjct: 747 GPLVAFGKNTSGQLGLGERKENQSRGEIASLR---NPRGIAAGIAHTLAVAADGTVWAWG 803

Query: 295 SGSNFCLGHGEQHDELQPRAIQ 316
           + +   LG+GE  +  QP  ++
Sbjct: 804 ANATGQLGNGEAANSPQPITVK 825



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 73/255 (28%), Positives = 113/255 (44%), Gaps = 22/255 (8%)

Query: 94  LRF---LQSVEHSSDIVETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETT 149
           LRF   ++ V   +D+   SAGN        H L L ++ +V++ GS+  G LG G +T+
Sbjct: 162 LRFDGGVRPVPGLTDVRAVSAGN-------EHALALRTDGTVWAWGSNFAGQLGDGTKTS 214

Query: 150 QCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRL 209
           +      +       V+ VSA+   +  + + G V+  GDN S   G   T      P  
Sbjct: 215 RSTPVQVVGL---TEVIAVSAAGYSSLALRKDGTVWAWGDNESGQLGD-GTMEGRLTP-- 268

Query: 210 VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 269
           V+ L  V    + AG   +  +   G V   G+N +GQLG G       P+ +A + ++ 
Sbjct: 269 VQVLDLVRVTGLAAGRGHSLAVLADGTVRAWGANIYGQLGDGGFSLEGNPRPVA-VSKLT 327

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
            VV +AA  S   AV  +G V S+GS  +  LG  ++ +   P  +         V  VS
Sbjct: 328 DVVSVAASTSLSFAVHSDGTVSSWGSNVDGALGVEQRSNSRVPSKVFGL----TDVATVS 383

Query: 330 AGDEHVVALDSSGYV 344
            G  + VAL   G V
Sbjct: 384 VGGYYAVALMGDGTV 398



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 84/312 (26%), Positives = 132/312 (42%), Gaps = 36/312 (11%)

Query: 47  GLYPQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDI 106
           GL  +   S   +   +L  + S+ AG + ++ + L N     W   L F Q    S+ I
Sbjct: 510 GLGDEPGASPTPVQVPKLAGVRSLAAGENSSLAV-LANGTVMAWGYGL-FGQLGSESASI 567

Query: 107 VETS------AGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHG-----PETTQCVSF 154
            +        +G   +  G +++L L  + +V+S G +  G LG G     P   Q    
Sbjct: 568 FQIPEPIFGLSGITAVAMGHWYSLALREDGTVWSWGYNASGQLGDGTTDERPRPGQVAGL 627

Query: 155 TRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEAL 213
           T+        V  ++A  +HA  +   G V+  G N+    G    T+R    P  V+ L
Sbjct: 628 TQ--------VTAIAAGASHALALRADGTVWAWGSNALGTLGDGTQTSRST--PVQVQGL 677

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            GV    V AG   +  L   G V + G+N  GQLG      R +P  +  L     V +
Sbjct: 678 TGVIA--VAAGEYHSLALREDGTVWSWGNNNEGQLGDVTASSRQSPGQVPGLA---GVQR 732

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR-KGIHVVRVSAGD 332
           IAAG  + LA    G + +FG  ++  LG GE+ +      I + R  +GI     +AG 
Sbjct: 733 IAAGEKHALAAVEGGPLVAFGKNTSGQLGLGERKENQSRGEIASLRNPRGI-----AAGI 787

Query: 333 EHVVALDSSGYV 344
            H +A+ + G V
Sbjct: 788 AHTLAVAADGTV 799



 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 64/198 (32%), Positives = 81/198 (40%), Gaps = 24/198 (12%)

Query: 104 SDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA 163
           +D+   S G      G Y   L+ + +V S G++  G LG G      +  T    P   
Sbjct: 377 TDVATVSVG------GYYAVALMGDGTVRSWGNNDSGQLGDG----TYIRHTPTPVPGLT 426

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH--RDTNR--PIFRPRLVEALKGVPCK 219
            V  VSA E+H   VL  G     GDN     G      NR  P+  P L EA       
Sbjct: 427 GVTAVSAGEDHVVAVLSDGSPRVWGDNQFMQLGRPPESVNRGGPVQVPGLTEA------S 480

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGP 278
            V AG   +  L   G V   G N+   LG GD     PTP  +  L  V S   +AAG 
Sbjct: 481 LVAAGKTHSLALLADGTVWAWGDNSFSALGLGDEPGASPTPVQVPKLAGVRS---LAAGE 537

Query: 279 SYMLAVTGNGVVYSFGSG 296
           +  LAV  NG V ++G G
Sbjct: 538 NSSLAVLANGTVMAWGYG 555



 Score = 51.2 bits (121), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 66/240 (27%), Positives = 91/240 (37%), Gaps = 30/240 (12%)

Query: 112 GNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRIN-----FPSAAHV 165
           G   +  GRYH+L++  + +V   G                +S+ R +      P    V
Sbjct: 134 GAPAVAAGRYHSLMVRPDGTVLEWG----------------LSYLRFDGGVRPVPGLTDV 177

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
             VSA   HA  +   G V+  G N     G         R   V+ +       V+A  
Sbjct: 178 RAVSAGNEHALALRTDGTVWAWGSN---FAGQLGDGTKTSRSTPVQVVGLTEVIAVSAAG 234

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
             +  L   G V   G N  GQLG G    R TP  +  L     V  +AAG  + LAV 
Sbjct: 235 YSSLALRKDGTVWAWGDNESGQLGDGTMEGRLTPVQVLDLVR---VTGLAAGRGHSLAVL 291

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVS 345
            +G V ++G+     LG G    E  PR +     K   VV V+A      A+ S G VS
Sbjct: 292 ADGTVRAWGANIYGQLGDGGFSLEGNPRPVAV--SKLTDVVSVAASTSLSFAVHSDGTVS 349


>gi|198462494|ref|XP_002135307.1| GA28417 [Drosophila pseudoobscura pseudoobscura]
 gi|198150848|gb|EDY73934.1| GA28417 [Drosophila pseudoobscura pseudoobscura]
          Length = 1052

 Score = 87.4 bits (215), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 72/240 (30%), Positives = 113/240 (47%), Gaps = 16/240 (6%)

Query: 115 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI  G  HTL L +N  V++CG++    LGH   T + +    +    A  V+Q++    
Sbjct: 40  QIACGHRHTLFLTANGQVYACGNNDHHQLGHELPTKRPLPIPEL---QAYVVIQIACGSR 96

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  + + GQ+ + GDN     GH   N  I  P+++  L      Q+  G N +  LT 
Sbjct: 97  HSMALTEWGQILSWGDNDCGQVGHSTDNDVIELPKILRFLVSRTVVQIACGNNHSLALTS 156

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG----SVVQIAAGPSYMLAVTGNGV 289
            G +++ GSN +GQLG     D   P S APL         +  IA G ++   ++ +  
Sbjct: 157 CGELYSWGSNIYGQLGVQSPKD--LPHSNAPLRLTTILGIPLATIACGGNHSFLISKSSA 214

Query: 290 VYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSLC 347
           V  FG G N C  LG  ++ +   P  +++ R  G+    V+ GDE+ V L + G V  C
Sbjct: 215 V--FGWGKNTCGQLGLNDEQNRAYPSQLKSMRTLGVRF--VTCGDEYSVFLTNEGGVFTC 270



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 72/235 (30%), Positives = 113/235 (48%), Gaps = 31/235 (13%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLG-----HG 145
           ++LRFL            S   +QI  G  H+L L S   ++S GS++ G LG       
Sbjct: 131 KILRFL-----------VSRTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVQSPKDL 179

Query: 146 PETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPI 204
           P +   +  T I   P A     ++   NH+  + +S  VF  G N+   CG    N   
Sbjct: 180 PHSNAPLRLTTILGIPLAT----IACGGNHSFLISKSSAVFGWGKNT---CGQLGLNDEQ 232

Query: 205 FR--PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
            R  P  +++++ +  + VT G  ++ FLT  G V TCG+  +GQLGHG + +   P+ +
Sbjct: 233 NRAYPSQLKSMRTLGVRFVTCGDEYSVFLTNEGGVFTCGAGNYGQLGHGASNNEMIPRMV 292

Query: 263 APLEEVGS-VVQIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAI 315
             +E +GS + Q+A G  + LA V   G VYSFG G++  LG      +  P+ +
Sbjct: 293 --IELMGSTITQVACGNRHTLALVPSGGRVYSFGLGASGQLGTRNTISQTLPKVV 345



 Score = 73.9 bits (180), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 47/143 (32%), Positives = 72/143 (50%), Gaps = 6/143 (4%)

Query: 201 NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 260
           N  I  P  +E     P +Q+  G   T FLT  G V+ CG+N H QLGH     RP P 
Sbjct: 21  NEQILLPSQIEFKPDSPVQQIACGHRHTLFLTANGQVYACGNNDHHQLGHELPTKRPLP- 79

Query: 261 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFR 319
              P  +   V+QIA G  + +A+T  G + S+G      +GH   +D ++ P+ ++   
Sbjct: 80  --IPELQAYVVIQIACGSRHSMALTEWGQILSWGDNDCGQVGHSTDNDVIELPKILRFLV 137

Query: 320 RKGIHVVRVSAGDEHVVALDSSG 342
            +   VV+++ G+ H +AL S G
Sbjct: 138 SRT--VVQIACGNNHSLALTSCG 158



 Score = 71.6 bits (174), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 79/167 (47%), Gaps = 4/167 (2%)

Query: 130 SVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
           +++  G +  G LG G  E  Q +  ++I F   + V Q++    H  F+  +GQV+ CG
Sbjct: 2   ALYCWGDASHGQLGLGGIENEQILLPSQIEFKPDSPVQQIACGHRHTLFLTANGQVYACG 61

Query: 189 DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 248
           +N     GH     P  RP  +  L+     Q+  G   +  LT  G + + G N  GQ+
Sbjct: 62  NNDHHQLGHE---LPTKRPLPIPELQAYVVIQIACGSRHSMALTEWGQILSWGDNDCGQV 118

Query: 249 GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
           GH    D      I       +VVQIA G ++ LA+T  G +YS+GS
Sbjct: 119 GHSTDNDVIELPKILRFLVSRTVVQIACGNNHSLALTSCGELYSWGS 165


>gi|356554129|ref|XP_003545401.1| PREDICTED: uncharacterized protein LOC100802464 [Glycine max]
          Length = 1106

 Score = 87.4 bits (215), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 61/189 (32%), Positives = 96/189 (50%), Gaps = 13/189 (6%)

Query: 159 FPSAAHVVQVSASEN------HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA 212
           FP A     V   +N      HAA V + G+VF+ G+ S    GH   +  +  P+L+EA
Sbjct: 299 FPKALESAVVLDVQNIACGGRHAALVTKQGEVFSWGEESGGRLGH-GVDSDVLHPKLIEA 357

Query: 213 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVG 269
           L     + V  G   +  +T+ G ++T G+ T+  G LGHG+ +    PK +  PLE + 
Sbjct: 358 LSNTNIELVACGEYHSCAVTLSGDLYTWGNGTYNYGLLGHGNQVSHWVPKRVNGPLEGI- 416

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
            V  I+ GP +   VT  G +++FG G+   LGHG++     PR +++   KG+  VR +
Sbjct: 417 HVSYISCGPWHTAVVTSAGQLFTFGDGTFGALGHGDRKSVSLPREVESL--KGLRTVRAA 474

Query: 330 AGDEHVVAL 338
            G  H  A+
Sbjct: 475 CGVWHTAAV 483



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 99/225 (44%), Gaps = 19/225 (8%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           I+ G +HT +++++  +F+ G    G LGHG   +  VS  R +        V+ +    
Sbjct: 421 ISCGPWHTAVVTSAGQLFTFGDGTFGALGHGDRKS--VSLPREVESLKGLRTVRAACGVW 478

Query: 174 HAAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
           H A V++            S  +FT GD      GH D    +  P  V   +   C QV
Sbjct: 479 HTAAVVEVMVGNSSSSNCSSVDLFTWGDGDKGRLGHVDKEAKLV-PTCVALAEHNVC-QV 536

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
             G + T  LT  G V+T GS  +GQLG+    D   P  +        V +IA G  ++
Sbjct: 537 ACGHSLTVALTTSGRVYTMGSPVYGQLGNPQA-DGKLPILVEGKLSESFVEEIACGAYHV 595

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
             +T    VY++G G+N  LGHG+  D   P  ++  + K +  +
Sbjct: 596 AVLTSRTEVYTWGKGANGRLGHGDTDDRNTPTLVEALKDKDVKSI 640



 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 67/248 (27%), Positives = 104/248 (41%), Gaps = 35/248 (14%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSAS 171
           GR+  L+     VFS G    G LGHG       P+  + +S T I          V+  
Sbjct: 318 GRHAALVTKQGEVFSWGEESGGRLGHGVDSDVLHPKLIEALSNTNIEL--------VACG 369

Query: 172 ENHAAFVLQSGQVFTCGDNSSF---CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
           E H+  V  SG ++T G N ++     GH +        R+   L+G+    ++ G   T
Sbjct: 370 EYHSCAVTLSGDLYTWG-NGTYNYGLLGHGNQVSHWVPKRVNGPLEGIHVSYISCGPWHT 428

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
             +T  G + T G  T G LGHGD      P+ +  L+ +   V+ A G  +  AV    
Sbjct: 429 AVVTSAGQLFTFGDGTFGALGHGDRKSVSLPREVESLKGL-RTVRAACGVWHTAAVVEVM 487

Query: 289 V------------VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
           V            ++++G G    LGH ++  +L P  +        +V +V+ G    V
Sbjct: 488 VGNSSSSNCSSVDLFTWGDGDKGRLGHVDKEAKLVPTCVALAEH---NVCQVACGHSLTV 544

Query: 337 ALDSSGYV 344
           AL +SG V
Sbjct: 545 ALTTSGRV 552



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 87/198 (43%), Gaps = 21/198 (10%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQ- 150
           R +R    V H++ +VE       +  G   +   S+  +F+ G    G LGH  +  + 
Sbjct: 469 RTVRAACGVWHTAAVVE-------VMVGNSSSSNCSSVDLFTWGDGDKGRLGHVDKEAKL 521

Query: 151 ---CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRP 207
              CV+    N      V QV+   +    +  SG+V+T G       G+   +  +  P
Sbjct: 522 VPTCVALAEHN------VCQVACGHSLTVALTTSGRVYTMGSPVYGQLGNPQADGKL--P 573

Query: 208 RLVEA-LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            LVE  L     +++  G      LT R  V+T G   +G+LGHGDT DR TP  +  L+
Sbjct: 574 ILVEGKLSESFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNTPTLVEALK 633

Query: 267 EVGSVVQIAAGPSYMLAV 284
           +   V  IA G ++  A+
Sbjct: 634 D-KDVKSIACGTTFTAAI 650



 Score = 39.7 bits (91), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 57/124 (45%), Gaps = 3/124 (2%)

Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+  G   T+ ++ S  V++ GS + G LG+ P+    +        S + V +++    
Sbjct: 535 QVACGHSLTVALTTSGRVYTMGSPVYGQLGN-PQADGKLPILVEGKLSESFVEEIACGAY 593

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H A +    +V+T G  ++   GH DT+     P LVEALK    K +  G  FT  + +
Sbjct: 594 HVAVLTSRTEVYTWGKGANGRLGHGDTD-DRNTPTLVEALKDKDVKSIACGTTFTAAICL 652

Query: 234 RGHV 237
              V
Sbjct: 653 HKWV 656



 Score = 39.3 bits (90), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 43/92 (46%), Gaps = 3/92 (3%)

Query: 251 GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL 310
           G  +D   PK++     V  V  IA G  +   VT  G V+S+G  S   LGHG   D L
Sbjct: 292 GAKMDSLFPKALESAV-VLDVQNIACGGRHAALVTKQGEVFSWGEESGGRLGHGVDSDVL 350

Query: 311 QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            P+ I+      I +  V+ G+ H  A+  SG
Sbjct: 351 HPKLIEALSNTNIEL--VACGEYHSCAVTLSG 380


>gi|297686828|ref|XP_002820940.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Pongo abelii]
          Length = 979

 Score = 87.4 bits (215), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 120/252 (47%), Gaps = 10/252 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYV 344
           H  A + SSG +
Sbjct: 305 HTSAFVPSSGRI 316



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 107/226 (47%), Gaps = 7/226 (3%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGV 263



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 98/206 (47%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G  H+L +S +S VF  G +  G LG G +  +  S   +        +QV+A  
Sbjct: 140 VQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 95/213 (44%), Gaps = 9/213 (4%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           P+ +++    GI  ++V+AG  H   L  SG +
Sbjct: 181 PQLLKSLL--GIPFMQVAAGGAHSFVLTLSGAI 211


>gi|344275071|ref|XP_003409337.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Loxodonta africana]
          Length = 1057

 Score = 87.4 bits (215), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 77/253 (30%), Positives = 121/253 (47%), Gaps = 12/253 (4%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TRINFPSAA--HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA 212
            R N  S A   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++
Sbjct: 128 PR-NIKSLADIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCKKQASPKLLKS 186

Query: 213 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
           L G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V
Sbjct: 187 LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIV 245

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
            I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G 
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGR 303

Query: 333 EHVVA-LDSSGYV 344
           +H  A + SSG +
Sbjct: 304 QHTSAFVPSSGRI 316



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 107/226 (47%), Gaps = 7/226 (3%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLADIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +PK +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGLDCKKQASPKLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGV 263



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   +        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCKKQASPKLLKSLLGIPFMQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 96/213 (45%), Gaps = 9/213 (4%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G +   +  
Sbjct: 122 EECIRVPRNIKSLADI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCKKQAS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           P+ +++    GI  ++V+AG  H   L  SG +
Sbjct: 181 PKLLKSLL--GIPFMQVAAGGAHSFVLTLSGAI 211


>gi|326668760|ref|XP_686789.5| PREDICTED: e3 ubiquitin-protein ligase HERC2, partial [Danio rerio]
          Length = 3645

 Score = 87.4 bits (215), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 72/228 (31%), Positives = 106/228 (46%), Gaps = 7/228 (3%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+   L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 1865 GRHAMALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAI 1923

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG++++ G       GH D N    RP+LV+ L G    QV  G     T  LT  G 
Sbjct: 1924 TSSGELYSWGLGEYGRLGHGD-NTTQLRPKLVKVLLGHRVVQVACGSRDAQTLALTDEGM 1982

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 1983 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 2041

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G V
Sbjct: 2042 DYFRLGHGTDVHVRKPQMVEGLR--GKKIVHVAVGALHCLAVTETGQV 2087



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 72/235 (30%), Positives = 111/235 (47%), Gaps = 8/235 (3%)

Query: 113  NMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS 171
             + + +G  H L L S   ++S G +  G LGHG   + C     I       VV ++A 
Sbjct: 2852 KVAVNSGGKHCLALSSEGELYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGVEVVDIAAG 2910

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTG 229
              H+A +  SG+++T G       GH D+   + +P+LVEAL+G     V   +G   T 
Sbjct: 2911 GAHSACITASGELYTWGKGRYGRLGHGDSEDQL-KPKLVEALQGHRVIDVACGSGDAQTL 2969

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             LT    V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G 
Sbjct: 2970 CLTDDDMVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSGA 3028

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            VY++G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G V
Sbjct: 3029 VYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEV 3081



 Score = 75.5 bits (184), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 59/188 (31%), Positives = 93/188 (49%), Gaps = 7/188 (3%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
            SA +VVQV+        V   G+V+ CG+ ++   G   ++  I  PR + AL     K+
Sbjct: 1799 SALNVVQVAGGSKSLFAVTAEGKVYACGEATNGRLGLGLSSGTIPIPRQISALSNYVVKK 1858

Query: 221  VT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
            V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA G 
Sbjct: 1859 VAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIACGS 1917

Query: 279  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVV 336
            S+  A+T +G +YS+G G    LGHG+   +L+P+ ++     G  VV+V+ G  D   +
Sbjct: 1918 SHSAAITSSGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLL--GHRVVQVACGSRDAQTL 1975

Query: 337  ALDSSGYV 344
            AL   G V
Sbjct: 1976 ALTDEGMV 1983



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  I++S  ++S G    G LGHG  TTQ +    +       VVQV+     
Sbjct: 1913 IACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQ-LRPKLVKVLLGHRVVQVACGSRD 1971

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 1972 AQTLALTDEGMVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 2030

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G V++
Sbjct: 2031 KSGVVWTWGKGDYFRLGHGTDVHVRKPQMVEGLRG-KKIVHVAVGALHCLAVTETGQVFA 2089

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 2090 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 2132



 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/162 (30%), Positives = 78/162 (48%), Gaps = 5/162 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T  G V+ CG 
Sbjct: 1769 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTAEGKVYACGE 1827

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I+ L   V   V + +G  + +A+T +G V+S+G G +  
Sbjct: 1828 ATNGRLGLGLSSGTIPIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGK 1887

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            LGH  + +  +PR I+  + K I    ++ G  H  A+ SSG
Sbjct: 1888 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAAITSSG 1927



 Score = 54.3 bits (129), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 75/167 (44%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  +  V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 2963 SGDAQTLCLTDDDMVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 3021

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 3022 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 3080

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    + ++A G ++ LA
Sbjct: 3081 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKINRVACGSAHTLA 3126



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/161 (29%), Positives = 69/161 (42%), Gaps = 3/161 (1%)

Query: 125  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
            L     VFS G    G LG G  +  C     I   +   V Q+      +  + +SG V
Sbjct: 1977 LTDEGMVFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVV 2035

Query: 185  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
            +T G    F  GH  T+  + +P++VE L+G     V  G      +T  G V   G N 
Sbjct: 2036 WTWGKGDYFRLGH-GTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTETGQVFAWGDND 2094

Query: 245  HGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 2095 HGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 2134



 Score = 47.0 bits (110), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 67/137 (48%), Gaps = 3/137 (2%)

Query: 207  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            P   EAL  +   Q+  G      +T  G ++  G    G+LG G T    TP  +  ++
Sbjct: 2787 PTPTEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQ 2846

Query: 267  EVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
             V    V + +G  + LA++  G +YS+G   +  LGHG +    +PR I++ R  G+ V
Sbjct: 2847 HVFIRKVAVNSGGKHCLALSSEGELYSWGEAEDGKLGHGNRSPCDRPRVIESLR--GVEV 2904

Query: 326  VRVSAGDEHVVALDSSG 342
            V ++AG  H   + +SG
Sbjct: 2905 VDIAAGGAHSACITASG 2921



 Score = 40.0 bits (92), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 56/111 (50%), Gaps = 7/111 (6%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 2763 GTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPV----QLIGGEQTLFAVTADGKLY 2818

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G
Sbjct: 2819 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEG 2869


>gi|297686826|ref|XP_002820939.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Pongo abelii]
          Length = 1057

 Score = 87.4 bits (215), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 120/252 (47%), Gaps = 10/252 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYV 344
           H  A + SSG +
Sbjct: 305 HTSAFVPSSGRI 316



 Score = 78.2 bits (191), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 107/226 (47%), Gaps = 7/226 (3%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGV 263



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 98/206 (47%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G  H+L +S +S VF  G +  G LG G +  +  S   +        +QV+A  
Sbjct: 140 VQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 95/213 (44%), Gaps = 9/213 (4%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           P+ +++    GI  ++V+AG  H   L  SG +
Sbjct: 181 PQLLKSLL--GIPFMQVAAGGAHSFVLTLSGAI 211


>gi|195170687|ref|XP_002026143.1| GL16177 [Drosophila persimilis]
 gi|194111023|gb|EDW33066.1| GL16177 [Drosophila persimilis]
          Length = 1052

 Score = 87.4 bits (215), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 72/240 (30%), Positives = 113/240 (47%), Gaps = 16/240 (6%)

Query: 115 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI  G  HTL L +N  V++CG++    LGH   T + +    +    A  V+Q++    
Sbjct: 40  QIACGHRHTLFLTANGQVYACGNNDHHQLGHELPTKRPLPIPEL---QAYVVIQIACGSR 96

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  + + GQ+ + GDN     GH   N  I  P+++  L      Q+  G N +  LT 
Sbjct: 97  HSMALTEWGQILSWGDNDCGQVGHSTDNDVIELPKILRFLVSRTVVQIACGNNHSLALTS 156

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG----SVVQIAAGPSYMLAVTGNGV 289
            G +++ GSN +GQLG     D   P S APL         +  IA G ++   ++ +  
Sbjct: 157 CGELYSWGSNIYGQLGVQSPKD--LPHSNAPLRLTTILGIPLATIACGGNHSFLISKSSA 214

Query: 290 VYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSLC 347
           V  FG G N C  LG  ++ +   P  +++ R  G+    V+ GDE+ V L + G V  C
Sbjct: 215 V--FGWGKNTCGQLGLNDEQNRAYPSQLKSMRTLGVRF--VTCGDEYSVFLTNEGGVFTC 270



 Score = 75.5 bits (184), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 72/235 (30%), Positives = 113/235 (48%), Gaps = 31/235 (13%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLG-----HG 145
           ++LRFL            S   +QI  G  H+L L S   ++S GS++ G LG       
Sbjct: 131 KILRFL-----------VSRTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVQSPKDL 179

Query: 146 PETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPI 204
           P +   +  T I   P A     ++   NH+  + +S  VF  G N+   CG    N   
Sbjct: 180 PHSNAPLRLTTILGIPLAT----IACGGNHSFLISKSSAVFGWGKNT---CGQLGLNDEQ 232

Query: 205 FR--PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
            R  P  +++++ +  + VT G  ++ FLT  G V TCG+  +GQLGHG + +   P+ +
Sbjct: 233 NRAYPSQLKSMRTLGVRFVTCGDEYSVFLTNEGGVFTCGAGNYGQLGHGVSNNEMIPRMV 292

Query: 263 APLEEVGS-VVQIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAI 315
             +E +GS + Q+A G  + LA V   G VYSFG G++  LG      +  P+ +
Sbjct: 293 --IELMGSTITQVACGNRHTLALVPSGGRVYSFGLGASGQLGTRNTISQTLPKVV 345



 Score = 73.9 bits (180), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 47/143 (32%), Positives = 72/143 (50%), Gaps = 6/143 (4%)

Query: 201 NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 260
           N  I  P  +E     P +Q+  G   T FLT  G V+ CG+N H QLGH     RP P 
Sbjct: 21  NEQILLPSQIEFKPDSPVQQIACGHRHTLFLTANGQVYACGNNDHHQLGHELPTKRPLP- 79

Query: 261 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFR 319
              P  +   V+QIA G  + +A+T  G + S+G      +GH   +D ++ P+ ++   
Sbjct: 80  --IPELQAYVVIQIACGSRHSMALTEWGQILSWGDNDCGQVGHSTDNDVIELPKILRFLV 137

Query: 320 RKGIHVVRVSAGDEHVVALDSSG 342
            +   VV+++ G+ H +AL S G
Sbjct: 138 SRT--VVQIACGNNHSLALTSCG 158



 Score = 71.2 bits (173), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 79/167 (47%), Gaps = 4/167 (2%)

Query: 130 SVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
           +++  G +  G LG G  E  Q +  ++I F   + V Q++    H  F+  +GQV+ CG
Sbjct: 2   ALYCWGDASHGQLGLGGIENEQILLPSQIEFKPDSPVQQIACGHRHTLFLTANGQVYACG 61

Query: 189 DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 248
           +N     GH     P  RP  +  L+     Q+  G   +  LT  G + + G N  GQ+
Sbjct: 62  NNDHHQLGHE---LPTKRPLPIPELQAYVVIQIACGSRHSMALTEWGQILSWGDNDCGQV 118

Query: 249 GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
           GH    D      I       +VVQIA G ++ LA+T  G +YS+GS
Sbjct: 119 GHSTDNDVIELPKILRFLVSRTVVQIACGNNHSLALTSCGELYSWGS 165


>gi|344275073|ref|XP_003409338.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Loxodonta africana]
          Length = 1049

 Score = 87.4 bits (215), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 77/253 (30%), Positives = 121/253 (47%), Gaps = 12/253 (4%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TRINFPSAA--HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA 212
            R N  S A   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++
Sbjct: 128 PR-NIKSLADIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCKKQASPKLLKS 186

Query: 213 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
           L G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V
Sbjct: 187 LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIV 245

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
            I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G 
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGR 303

Query: 333 EHVVA-LDSSGYV 344
           +H  A + SSG +
Sbjct: 304 QHTSAFVPSSGRI 316



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 107/226 (47%), Gaps = 7/226 (3%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLADIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +PK +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGLDCKKQASPKLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGV 263



 Score = 79.0 bits (193), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   +        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCKKQASPKLLKSLLGIPFMQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 96/213 (45%), Gaps = 9/213 (4%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G +   +  
Sbjct: 122 EECIRVPRNIKSLADI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCKKQAS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           P+ +++    GI  ++V+AG  H   L  SG +
Sbjct: 181 PKLLKSLL--GIPFMQVAAGGAHSFVLTLSGAI 211


>gi|242066354|ref|XP_002454466.1| hypothetical protein SORBIDRAFT_04g031600 [Sorghum bicolor]
 gi|241934297|gb|EES07442.1| hypothetical protein SORBIDRAFT_04g031600 [Sorghum bicolor]
          Length = 1003

 Score = 87.4 bits (215), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 86/336 (25%), Positives = 152/336 (45%), Gaps = 26/336 (7%)

Query: 12  ELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKF-RSLVDLAASQLCALHSI 70
           E  SH +  I  +G  S++DL H      +  GS  L   K+  S +D +          
Sbjct: 88  EKESHSLSVIYKNGE-SSLDLVH------SLYGSPRLIQNKYLHSNLDCSEPFFSPRQKA 140

Query: 71  YAGMS---RNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLIS 127
           ++ +      +  EL+NR   N    LR ++S E   D        ++ + G  +    S
Sbjct: 141 WSELDSYLEKISPELVNRVKNN----LRDIRSAETIKDQRIIQMPKLKQSEGS-NAATDS 195

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVLQSGQVFT 186
              +F  G  L  +  HG      +S  R+   S    VQ ++  E HAA V + GQVF+
Sbjct: 196 LKDIFVWGDVLGRMSDHGHVPATNISLPRLLKSSQILNVQSIACGEKHAAIVTKQGQVFS 255

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G+ +    GH+ T+  +  P+++++L   P K +  G  +T  +++ G ++  G   H 
Sbjct: 256 WGEENGGRLGHK-TSDSVSDPKIIDSLASTPVKTIAFGAKYTCAVSVSGELYEWGEGIHS 314

Query: 247 QLGHGDTLDRPTP----KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
            LG G    + +P    K I+  + + SV++IA G  +   ++  G +Y++G G+   LG
Sbjct: 315 -LGFGKNQCQRSPWFPHKLISTSDGI-SVLKIACGQWHTAIISSLGKLYTYGYGTFGVLG 372

Query: 303 HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           HG+ H  + P+ +++ R  G     V+ G  H  A+
Sbjct: 373 HGDTHSVVHPKEVESLR--GSRAKSVACGPWHTAAI 406



 Score = 55.1 bits (131), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 51/165 (30%), Positives = 74/165 (44%), Gaps = 17/165 (10%)

Query: 116 ITTGRYHTLLISNSS-----------VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH 164
           +  G +HT  I  +S           +F+ G +  G LGH  + ++ V  TR+       
Sbjct: 396 VACGPWHTAAIVETSGTLKSSAPGGKLFTWGDAGGGKLGHTNKKSKLVP-TRVESLIDCD 454

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEA-LKGVPCKQVT 222
             QVS   +  A +  +G VFT G       G+ R  N  I    +VE  LK    K ++
Sbjct: 455 FTQVSCGMSLTAVLTITGVVFTIGSKEHGQLGNSRSDNTSIC---MVEGPLKTEFVKDIS 511

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE 267
            G +    LT+ G V T G  T GQLG GD +DR +P  +  LE+
Sbjct: 512 CGSSHVAVLTMNGKVFTWGKGTEGQLGLGDYVDRSSPTLVEALED 556



 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 49/190 (25%), Positives = 84/190 (44%), Gaps = 14/190 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V++++  + H A +   G+++T G  +    GH DT+  +  P+ VE+L+G   K V  G
Sbjct: 341 VLKIACGQWHTAIISSLGKLYTYGYGTFGVLGHGDTH-SVVHPKEVESLRGSRAKSVACG 399

Query: 225 LNFTGFL-----TIR-----GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 274
              T  +     T++     G + T G    G+LGH +   +  P  +  L +     Q+
Sbjct: 400 PWHTAAIVETSGTLKSSAPGGKLFTWGDAGGGKLGHTNKKSKLVPTRVESLIDC-DFTQV 458

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 334
           + G S    +T  GVV++ GS  +  LG+    +      +     K   V  +S G  H
Sbjct: 459 SCGMSLTAVLTITGVVFTIGSKEHGQLGNSRSDN--TSICMVEGPLKTEFVKDISCGSSH 516

Query: 335 VVALDSSGYV 344
           V  L  +G V
Sbjct: 517 VAVLTMNGKV 526


>gi|37747571|gb|AAH60033.1| Herc4 protein [Mus musculus]
          Length = 1057

 Score = 87.4 bits (215), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 118/252 (46%), Gaps = 10/252 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLG-HGPETTQCVSF 154
           +S +    +V   A N+  +  G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V + + G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQAACGRQ 304

Query: 334 HVVA-LDSSGYV 344
           H  A + SSG +
Sbjct: 305 HTSAFVPSSGRI 316



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 108/226 (47%), Gaps = 7/226 (3%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V V+  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVACGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G + +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCQKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGV 263



 Score = 77.8 bits (190), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 98/206 (47%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   I        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V Q A G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQAACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 86/191 (45%), Gaps = 8/191 (4%)

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           R +F     V  V     H  FVL  G V+TCG N     GH  + +   +P  V AL  
Sbjct: 27  RSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDA 83

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGDTLDRPTPKSIAPLEEVGSVVQI 274
                V  G   T  L  +G V+  G ++ GQLG  G       P++I  L ++  +VQ+
Sbjct: 84  QNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDI-QIVQV 142

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           A G  + LA++    V+ +G      LG G +   +  P+ I++    GI  ++V+AG  
Sbjct: 143 ACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLL--GIPFMQVAAGGA 200

Query: 334 HVVALDSSGYV 344
           H   L  SG +
Sbjct: 201 HSFVLTLSGAI 211



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 71/142 (50%), Gaps = 6/142 (4%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG-HGEQHDELQPRAIQTFRRKG 322
            L +  ++V +A G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  AL-DAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSL--SD 136

Query: 323 IHVVRVSAGDEHVVALDSSGYV 344
           I +V+V+ G  H +AL  +  V
Sbjct: 137 IQIVQVACGYYHSLALSKASEV 158


>gi|440801355|gb|ELR22375.1| regulator of chromosome condensation, RCC1, putative [Acanthamoeba
           castellanii str. Neff]
          Length = 395

 Score = 87.4 bits (215), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 72/232 (31%), Positives = 109/232 (46%), Gaps = 23/232 (9%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
           V S G    G LG G   TQ    T I    A  VV VSA  +H+  + + G+VF+ G+ 
Sbjct: 5   VLSAGGGQHGSLGQGDAVTQLSVLTPIRALEAHRVVAVSAGGHHSLVLTEEGRVFSFGNG 64

Query: 191 SSFCCGHRDTNRPIFRPRLV---EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
                GH +     F PR +   +   GV   +++AG   +  LT  G  ++ G    G+
Sbjct: 65  LHGRLGHGN-EETCFEPRRIAFFDTTAGV--AKISAGTTHSLALTKDGKAYSFGFGMFGR 121

Query: 248 LGHGDTLDRPTPKSIA--------PL------EEVGSVVQ-IAAGPSYMLAVTGNGVVYS 292
           LGHGD  D+  P+ I         P+       E   V++ +AAG  + L +T +G VYS
Sbjct: 122 LGHGDETDQLLPREITLRGHGASPPVGDRVEENETDPVIEHVAAGYFHSLLLTTDGRVYS 181

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           FG+G    LGHG++   L+P  I+    +   +V ++ G  + + LD  G V
Sbjct: 182 FGAGVMGALGHGDRDKRLRPTMIEALADR--RIVSMACGSANTLVLDDEGRV 231



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 88/198 (44%), Gaps = 19/198 (9%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRIN-FPSAAHVVQVSAS 171
           + ++ G +H+L+++    VFS G+ L G LGHG E T C    RI  F + A V ++SA 
Sbjct: 40  VAVSAGGHHSLVLTEEGRVFSFGNGLHGRLGHGNEET-CFEPRRIAFFDTTAGVAKISAG 98

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTN---------------RPIFRPRLVEALKGV 216
             H+  + + G+ ++ G       GH D                  P    R+ E     
Sbjct: 99  TTHSLALTKDGKAYSFGFGMFGRLGHGDETDQLLPREITLRGHGASPPVGDRVEENETDP 158

Query: 217 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
             + V AG   +  LT  G V++ G+   G LGHGD   R  P  I  L +   +V +A 
Sbjct: 159 VIEHVAAGYFHSLLLTTDGRVYSFGAGVMGALGHGDRDKRLRPTMIEALADR-RIVSMAC 217

Query: 277 GPSYMLAVTGNGVVYSFG 294
           G +  L +   G V+ FG
Sbjct: 218 GSANTLVLDDEGRVFFFG 235



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 110/251 (43%), Gaps = 25/251 (9%)

Query: 108 ETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSF------------ 154
           +T+AG  +I+ G  H+L L  +   +S G  + G LGHG ET Q +              
Sbjct: 87  DTTAGVAKISAGTTHSLALTKDGKAYSFGFGMFGRLGHGDETDQLLPREITLRGHGASPP 146

Query: 155 --TRINFPSAAHVVQ-VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE 211
              R+       V++ V+A   H+  +   G+V++ G       GH D ++ + RP ++E
Sbjct: 147 VGDRVEENETDPVIEHVAAGYFHSLLLTTDGRVYSFGAGVMGALGHGDRDKRL-RPTMIE 205

Query: 212 ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN--THGQLGHGDTLDRPTPKSIAPLEEVG 269
           AL       +  G   T  L   G V   G +     +   G       P ++   EE+ 
Sbjct: 206 ALADRRIVSMACGSANTLVLDDEGRVFFFGLDYSEFPKFTEGQARFVLLPSALGLAEEI- 264

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR-- 327
              ++ AG  + L +T  G + +FG G N  LG G++ + L P A+ TF   G   V   
Sbjct: 265 --TEVRAGEGHCLLLTREGKLLAFGLGKNGRLGLGDETNRLAPTAV-TFPSNGTTSVEID 321

Query: 328 VSAGDEHVVAL 338
           ++ G +H +AL
Sbjct: 322 IACGAKHGLAL 332



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 66/236 (27%), Positives = 105/236 (44%), Gaps = 15/236 (6%)

Query: 115 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
            +  G +H+LL++ +  V+S G+ + G LGHG +  + +  T I   +   +V ++    
Sbjct: 162 HVAAGYFHSLLLTTDGRVYSFGAGVMGALGHG-DRDKRLRPTMIEALADRRIVSMACGSA 220

Query: 174 HAAFVLQSGQVFTCG-DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           +   +   G+VF  G D S F        R +  P  +   + +   +V AG      LT
Sbjct: 221 NTLVLDDEGRVFFFGLDYSEFPKFTEGQARFVLLPSALGLAEEI--TEVRAGEGHCLLLT 278

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSV-VQIAAGPSYMLA---VTGN 287
             G +   G   +G+LG GD  +R  P ++  P     SV + IA G  + LA   V G 
Sbjct: 279 REGKLLAFGLGKNGRLGLGDETNRLAPTAVTFPSNGTTSVEIDIACGAKHGLALVDVPGE 338

Query: 288 GV-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH----VVRVSAGDEHVVAL 338
           G  +Y+FGSG    L +G + D   P A  T     +H       +SAG  H + L
Sbjct: 339 GPRLYAFGSGDQGQLANGHRQDRASPTATTTSLPALLHQHIVPAAISAGKAHSLVL 394



 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 39/110 (35%), Positives = 57/110 (51%), Gaps = 1/110 (0%)

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
           +RG V + G   HG LG GD + + +  +     E   VV ++AG  + L +T  G V+S
Sbjct: 1   MRGVVLSAGGGQHGSLGQGDAVTQLSVLTPIRALEAHRVVAVSAGGHHSLVLTEEGRVFS 60

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           FG+G +  LGHG +    +PR I  F      V ++SAG  H +AL   G
Sbjct: 61  FGNGLHGRLGHGNEETCFEPRRIAFFDTTA-GVAKISAGTTHSLALTKDG 109


>gi|296088111|emb|CBI35500.3| unnamed protein product [Vitis vinifera]
          Length = 910

 Score = 87.4 bits (215), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 78/261 (29%), Positives = 124/261 (47%), Gaps = 23/261 (8%)

Query: 95  RFLQSVEHSS-DIVETSAGNMQI---TTGRYHTLLISNS-SVFSCGSSLCGVLGHG---- 145
           R ++S+  +S D V      +Q+   T G +HT L++ +  +F+ G    GVLGHG    
Sbjct: 304 RLVESLAFTSVDFVACPLEGLQVASVTCGPWHTALVTTTRQLFTFGDGTFGVLGHGDKDN 363

Query: 146 ---PETTQCVSFTRI-----NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH 197
              P   + +S  R           A VV+V  +++ A+  + SG++FT GD      GH
Sbjct: 364 VAYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSAS--VSSGKLFTWGDGDKNRLGH 421

Query: 198 RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP 257
            D   P  +P  V AL     ++V  G + T  LT  G V T GS  +GQLG+  + D  
Sbjct: 422 GD-KEPRLKPTCVPALIEYNFQKVACGHSLTVGLTTSGQVCTMGSTVYGQLGNPQS-DGK 479

Query: 258 TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQT 317
            P  +        V +IA G  ++  +T    VY++G G+N  LGHG+  D   P  ++T
Sbjct: 480 LPCFVEDKLLGECVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDIEDRKTPTLVET 539

Query: 318 FRRKGIHVVRVSAGDEHVVAL 338
            + +  HV  ++ G  +  A+
Sbjct: 540 LKDR--HVKYIACGSNYTAAI 558



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/194 (28%), Positives = 86/194 (44%), Gaps = 27/194 (13%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA------------LKGVPCKQV 221
           HAA V + G++FT G+ S    GH    R + +PRLVE+            L+G+    V
Sbjct: 271 HAALVTRQGEIFTWGEESGGRLGH-GVGRDVIQPRLVESLAFTSVDFVACPLEGLQVASV 329

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
           T G   T  +T    + T G  T G LGHGD  +   P+ +  L  + ++  +A G  + 
Sbjct: 330 TCGPWHTALVTTTRQLFTFGDGTFGVLGHGDKDNVAYPREVESLSGLRTIA-VACGVWHT 388

Query: 282 LAV-----------TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
            AV             +G ++++G G    LGHG++   L+P  +           +V+ 
Sbjct: 389 AAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIEYNFQ--KVAC 446

Query: 331 GDEHVVALDSSGYV 344
           G    V L +SG V
Sbjct: 447 GHSLTVGLTTSGQV 460



 Score = 52.0 bits (123), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 60/130 (46%), Gaps = 15/130 (11%)

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA------------PLEEV 268
           +  G+     +T +G + T G  + G+LGHG   D   P+ +             PLE +
Sbjct: 265 IACGVRHAALVTRQGEIFTWGEESGGRLGHGVGRDVIQPRLVESLAFTSVDFVACPLEGL 324

Query: 269 GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 328
             V  +  GP +   VT    +++FG G+   LGHG++ +   PR +++    G+  + V
Sbjct: 325 -QVASVTCGPWHTALVTTTRQLFTFGDGTFGVLGHGDKDNVAYPREVESL--SGLRTIAV 381

Query: 329 SAGDEHVVAL 338
           + G  H  A+
Sbjct: 382 ACGVWHTAAV 391


>gi|224179015|gb|AAI72191.1| hect domain and RLD 2 [synthetic construct]
          Length = 2427

 Score = 87.4 bits (215), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 110/237 (46%), Gaps = 17/237 (7%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 169
           + G ++  L +   V+S G    G LGHG       P+     S  +    +  HVV ++
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AGKHVVHIA 557

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G     
Sbjct: 558 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQ 616

Query: 230 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
            L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +
Sbjct: 617 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSIALTKD 675

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V
Sbjct: 676 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEV 730



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/187 (31%), Positives = 94/187 (50%), Gaps = 20/187 (10%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 501

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 561

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 562 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 619

Query: 338 LDSSGYV 344
           +  +G V
Sbjct: 620 VTENGQV 626



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 83/180 (46%), Gaps = 5/180 (2%)

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS--ASENHAAFV 178
           Y   + +   +++ G    G LGHG    + +            V+ V+  + +     V
Sbjct: 562 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAV 620

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
            ++GQV++ GD      G R  +     P+L+E L+ +   +V  G  F+  LT  G V+
Sbjct: 621 TENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 679

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           + G   + +LGHG       PK +  L+    V+ +AAG ++ LA+T +  V+S+GS   
Sbjct: 680 SWGKGDNQRLGHGTEEHVRYPKLLEGLQG-KKVIDVAAGSTHCLALTEDSEVHSWGSNDQ 738



 Score = 54.7 bits (130), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 730 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 775


>gi|60097906|ref|NP_080268.1| E3 ISG15--protein ligase Herc6 [Mus musculus]
 gi|403399416|sp|F2Z461.1|HERC6_MOUSE RecName: Full=E3 ISG15--protein ligase Herc6
          Length = 1003

 Score = 87.4 bits (215), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 75/245 (30%), Positives = 117/245 (47%), Gaps = 27/245 (11%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 165
           +Q  +G +H+LL+ SN  V+SCG +  G LG         PE  Q ++          HV
Sbjct: 25  LQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQALN--------DLHV 76

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
             VS  + H+  V   G+VF  G  S    G  +     F P  ++AL G+   QV+ G 
Sbjct: 77  DLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGH 136

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             +  L+  GHV + G N+ GQLG G ++  +  P+ +  LE +  + Q+AAG ++  A+
Sbjct: 137 YHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGI-PLAQVAAGGTHSFAL 195

Query: 285 TGNGVVYSFGSGSN----FCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
           +  G   SFG GSN      L   +  +++ +P +I     K + V+ +S G EH   L 
Sbjct: 196 SLTGT--SFGWGSNRSGQLALSGNKVKEQIYKPHSIGAL--KNLSVIYISCGYEHTAVLT 251

Query: 340 SSGYV 344
             G V
Sbjct: 252 EEGQV 256



 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/184 (27%), Positives = 97/184 (52%), Gaps = 6/184 (3%)

Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
           S   ++Q ++ E+H+  +  + +V++CGDNS    G R  ++   RP  ++AL  +    
Sbjct: 20  SGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQR-RDQSTERPEPIQALNDLHVDL 78

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPS 279
           V+ G   +  +  +G V   G+ + GQLG G+  +    P  I  L  +  ++Q++ G  
Sbjct: 79  VSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGI-KIIQVSCGHY 137

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           + LA++ +G V+S+G  S   LG G+    +  P+ +++   +GI + +V+AG  H  AL
Sbjct: 138 HSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSL--EGIPLAQVAAGGTHSFAL 195

Query: 339 DSSG 342
             +G
Sbjct: 196 SLTG 199



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 62/226 (27%), Positives = 106/226 (46%), Gaps = 8/226 (3%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           ++ G+ H++ + +   VF+ G+   G LG G         T+I   +   ++QVS    H
Sbjct: 79  VSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGHYH 138

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           +  + + G VF+ G NS    G    +R    P+ V++L+G+P  QV AG   +  L++ 
Sbjct: 139 SLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLT 198

Query: 235 GHVHTCGSNTHGQLG-HGDTLDRP--TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           G     GSN  GQL   G+ +      P SI  L+ + SV+ I+ G  +   +T  G V+
Sbjct: 199 GTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNL-SVIYISCGYEHTAVLTEEGQVF 257

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           +FG  S+  L    +  +  P+ I+     G  V ++     H +A
Sbjct: 258 TFGGNSSGQLQPSPRSGQRGPQLIEGI---GGRVSQIECASYHTIA 300



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 71/141 (50%), Gaps = 5/141 (3%)

Query: 206 RPRLVEA-LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
           +PR ++A   G+   Q  +G + +  L     V++CG N+ GQLG         P+ I  
Sbjct: 11  KPRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQA 70

Query: 265 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGI 323
           L ++  V  ++ G  + +AV   G V+++G+GS   LG GE +     P  I+     GI
Sbjct: 71  LNDL-HVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKAL--AGI 127

Query: 324 HVVRVSAGDEHVVALDSSGYV 344
            +++VS G  H +AL   G+V
Sbjct: 128 KIIQVSCGHYHSLALSEDGHV 148


>gi|119578070|gb|EAW57666.1| hCG2006901, isoform CRA_c [Homo sapiens]
          Length = 2984

 Score = 87.4 bits (215), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 110/237 (46%), Gaps = 17/237 (7%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 169
           + G ++  L +   V+S G    G LGHG       P+     S  +    +  HVV ++
Sbjct: 493 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AGKHVVHIA 548

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G     
Sbjct: 549 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQ 607

Query: 230 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
            L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +
Sbjct: 608 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSIALTKD 666

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V
Sbjct: 667 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEV 721



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/187 (31%), Positives = 94/187 (50%), Gaps = 20/187 (10%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 444 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 492

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 493 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 552

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 553 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 610

Query: 338 LDSSGYV 344
           +  +G V
Sbjct: 611 VTENGQV 617



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 83/180 (46%), Gaps = 5/180 (2%)

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS--ASENHAAFV 178
           Y   + +   +++ G    G LGHG    + +            V+ V+  + +     V
Sbjct: 553 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAV 611

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
            ++GQV++ GD      G R  +     P+L+E L+ +   +V  G  F+  LT  G V+
Sbjct: 612 TENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 670

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           + G   + +LGHG       PK +  L+    V+ +AAG ++ LA+T +  V+S+GS   
Sbjct: 671 SWGKGDNQRLGHGTEEHVRYPKLLEGLQG-KKVIDVAAGSTHCLALTEDSEVHSWGSNDQ 729



 Score = 54.7 bits (130), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 603 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 661

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 662 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 720

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 721 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 766


>gi|119578072|gb|EAW57668.1| hCG2006901, isoform CRA_e [Homo sapiens]
          Length = 2948

 Score = 87.4 bits (215), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 110/237 (46%), Gaps = 17/237 (7%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 169
           + G ++  L +   V+S G    G LGHG       P+     S  +    +  HVV ++
Sbjct: 464 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AGKHVVHIA 519

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G     
Sbjct: 520 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQ 578

Query: 230 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
            L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +
Sbjct: 579 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSIALTKD 637

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V
Sbjct: 638 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEV 692



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/187 (31%), Positives = 94/187 (50%), Gaps = 20/187 (10%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 415 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 463

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 464 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 523

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 524 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 581

Query: 338 LDSSGYV 344
           +  +G V
Sbjct: 582 VTENGQV 588



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 83/180 (46%), Gaps = 5/180 (2%)

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS--ASENHAAFV 178
           Y   + +   +++ G    G LGHG    + +            V+ V+  + +     V
Sbjct: 524 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAV 582

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
            ++GQV++ GD      G R  +     P+L+E L+ +   +V  G  F+  LT  G V+
Sbjct: 583 TENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 641

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           + G   + +LGHG       PK +  L+    V+ +AAG ++ LA+T +  V+S+GS   
Sbjct: 642 SWGKGDNQRLGHGTEEHVRYPKLLEGLQG-KKVIDVAAGSTHCLALTEDSEVHSWGSNDQ 700



 Score = 54.7 bits (130), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 574 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 632

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 633 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 691

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 692 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 737


>gi|47221092|emb|CAG12786.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 527

 Score = 87.4 bits (215), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 66/218 (30%), Positives = 103/218 (47%), Gaps = 4/218 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  VF+ G++  G LG G +    +   RI+      +V +S  +  H A     G+VF+
Sbjct: 40  NDEVFALGTNCSGCLGLG-DLQSTIEPRRIDALCGKKIVSLSYGTGPHVAIATADGEVFS 98

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N     G+  TN  +    +   L G    +V  G + T  LT  G V   G N  G
Sbjct: 99  WGHNGYSQLGNGTTNHGLTPALVSTNLLGKRVIEVACGSHHTIALTTDGEVFAWGYNNSG 158

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T ++PTP+ ++   +  +VV IA G    +AV  +G +Y +G   N  LG G  
Sbjct: 159 QVGSGSTANQPTPRRVSSCLQNKAVVNIACGQLCSMAVLDSGEIYGWGYNCNGQLGLGNN 218

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            ++  P  I     +G+ V++V+ G  H +AL   G+V
Sbjct: 219 GNQQTPCRIAAL--QGVSVIQVACGYAHTLALTDEGFV 254



 Score = 70.9 bits (172), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 103/213 (48%), Gaps = 11/213 (5%)

Query: 118 TGRYHTLLISNSSVFSCGSSLCGVLGHGPE----TTQCVSFTRINFPSAAHVVQVSASEN 173
           TG +  +  ++  VFS G +    LG+G      T   VS   +       V++V+   +
Sbjct: 83  TGPHVAIATADGEVFSWGHNGYSQLGNGTTNHGLTPALVSTNLL----GKRVIEVACGSH 138

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           H   +   G+VF  G N+S   G   T N+P  R R+   L+      +  G   +  + 
Sbjct: 139 HTIALTTDGEVFAWGYNNSGQVGSGSTANQPTPR-RVSSCLQNKAVVNIACGQLCSMAVL 197

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G ++  G N +GQLG G+  ++ TP  IA L+ V SV+Q+A G ++ LA+T  G VY+
Sbjct: 198 DSGEIYGWGYNCNGQLGLGNNGNQQTPCRIAALQGV-SVIQVACGYAHTLALTDEGFVYA 256

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
           +G+ S   LG G + ++  P  I T + +   V
Sbjct: 257 WGANSYGQLGTGNKCNQALPTLINTDKERMAEV 289



 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/184 (27%), Positives = 82/184 (44%), Gaps = 6/184 (3%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G +HT+ L ++  VF+ G +  G +G G    Q       +      VV ++  +
Sbjct: 131 IEVACGSHHTIALTTDGEVFAWGYNNSGQVGSGSTANQPTPRRVSSCLQNKAVVNIACGQ 190

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRD--TNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
             +  VL SG+++  G N   C G      N     P  + AL+GV   QV  G   T  
Sbjct: 191 LCSMAVLDSGEIYGWGYN---CNGQLGLGNNGNQQTPCRIAALQGVSVIQVACGYAHTLA 247

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           LT  G V+  G+N++GQLG G+  ++  P  I   +E  + V          A T +G V
Sbjct: 248 LTDEGFVYAWGANSYGQLGTGNKCNQALPTLINTDKERMAEVAACHTSHTSAAKTQSGQV 307

Query: 291 YSFG 294
             +G
Sbjct: 308 LMWG 311


>gi|327277954|ref|XP_003223728.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Anolis carolinensis]
          Length = 1060

 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 68/225 (30%), Positives = 107/225 (47%), Gaps = 6/225 (2%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           ++ G  HTL +++   V++ G +  G LG  P T +     R I   S   +VQV+    
Sbjct: 89  VSCGEAHTLTLNDKGQVYAWGFAADGQLGL-PGTEEYTRVPRNIKSLSDVQIVQVACGYY 147

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  + +  +VF+ G N     G     +    P+L+++L G+P  Q+ AG   +  LT+
Sbjct: 148 HSLALSKGSEVFSWGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIAAGGAHSFALTL 207

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V   G N  GQLG  D  DR  P  +  L     +V I+ G  +  A+T  G V++F
Sbjct: 208 SGAVFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYISCGEDHTAALTKEGGVFTF 266

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           G+G    LGH     E+ PR +  F   G  V +++ G +H  A 
Sbjct: 267 GAGGYGQLGHNSTGHEINPRKV--FELMGNIVTQIACGRQHTSAF 309



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 107/226 (47%), Gaps = 7/226 (3%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +     ++    A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKRP---EQVGALDAQNIVAVSCGEAHTLTLN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G  +    G   T      PR +++L  V   QV  G   +  L+    V +
Sbjct: 101 DKGQVYAWGFAADGQLGLPGTEEYTRVPRNIKSLSDVQIVQVACGYYHSLALSKGSEVFS 160

Query: 240 CGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N HGQLG G  L + T P+ I  L  +    QIAAG ++  A+T +G V+ +G    
Sbjct: 161 WGQNKHGQLGLGYDLKKQTSPQLIKSLLGI-PFGQIAAGGAHSFALTLSGAVFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             LG  +++D   P  +++ R + I  V +S G++H  AL   G V
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYISCGEDHTAALTKEGGV 263



 Score = 78.6 bits (192), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 98/206 (47%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S  S VFS G +  G LG G +  +  S   I         Q++A  
Sbjct: 140 VQVACGYYHSLALSKGSEVFSWGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG VF  G N     G  D N   + P L+++L+      ++ G + T  LT
Sbjct: 200 AHSFALTLSGAVFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYISCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +G++V QIA G  +  A V   G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTGHEINPRKV--FELMGNIVTQIACGRQHTSAFVPSTGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGMGSTSNRKSPFPVK 342



 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 68/213 (31%), Positives = 97/213 (45%), Gaps = 9/213 (4%)

Query: 135 GSSLCGVLGHGPETTQCV-SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V    R NF     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEVVLEPRRCNFFLNKTVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 253
             GH  + +   RP  V AL       V+ G   T  L  +G V+  G    GQLG   T
Sbjct: 65  QLGHEKSRK---RPEQVGALDAQNIVAVSCGEAHTLTLNDKGQVYAWGFAADGQLGLPGT 121

Query: 254 LDRP-TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
            +    P++I  L +V  +VQ+A G  + LA++    V+S+G   +  LG G +   +  
Sbjct: 122 EEYTRVPRNIKSLSDV-QIVQVACGYYHSLALSKGSEVFSWGQNKHGQLGLGYDLKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           P+ I++    GI   +++AG  H  AL  SG V
Sbjct: 181 PQLIKSLL--GIPFGQIAAGGAHSFALTLSGAV 211


>gi|225463891|ref|XP_002264093.1| PREDICTED: uncharacterized protein LOC100246114 [Vitis vinifera]
          Length = 1129

 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 73/243 (30%), Positives = 115/243 (47%), Gaps = 19/243 (7%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           +T G +HT L++ +  +F+ G    GVLGHG +    V++ R +   S    + V+    
Sbjct: 392 VTCGPWHTALVTTTRQLFTFGDGTFGVLGHGDKDN--VAYPREVESLSGLRTIAVACGVW 449

Query: 174 HAAFVLQ-----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           H A V++           SG++FT GD      GH D   P  +P  V AL     ++V 
Sbjct: 450 HTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGD-KEPRLKPTCVPALIEYNFQKVA 508

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
            G + T  LT  G V T GS  +GQLG+  + D   P  +        V +IA G  ++ 
Sbjct: 509 CGHSLTVGLTTSGQVCTMGSTVYGQLGNPQS-DGKLPCFVEDKLLGECVEEIACGAYHVA 567

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            +T    VY++G G+N  LGHG+  D   P  ++T + +  HV  ++ G  +  A+    
Sbjct: 568 VLTSRNEVYTWGKGANGRLGHGDIEDRKTPTLVETLKDR--HVKYIACGSNYTAAICLHK 625

Query: 343 YVS 345
           +VS
Sbjct: 626 WVS 628



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 57/168 (33%), Positives = 86/168 (51%), Gaps = 7/168 (4%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           HAA V + G++FT G+ S    GH    R + +PRLVE+L       V  G   T  +T+
Sbjct: 291 HAALVTRQGEIFTWGEESGGRLGH-GVGRDVIQPRLVESLAFTSVDFVACGEFHTCAVTM 349

Query: 234 RGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            G + T G  TH  G LGHG  +    PK I+ PLE +  V  +  GP +   VT    +
Sbjct: 350 AGELFTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGL-QVASVTCGPWHTALVTTTRQL 408

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           ++FG G+   LGHG++ +   PR +++    G+  + V+ G  H  A+
Sbjct: 409 FTFGDGTFGVLGHGDKDNVAYPREVESL--SGLRTIAVACGVWHTAAV 454



 Score = 44.3 bits (103), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 4/139 (2%)

Query: 200 TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP 259
           T   +  P+ +E+   +    +  G+     +T +G + T G  + G+LGHG   D   P
Sbjct: 264 TRADLLLPKPLESNVVLDVHHIACGVRHAALVTRQGEIFTWGEESGGRLGHGVGRDVIQP 323

Query: 260 KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQT 317
           + +  L    SV  +A G  +  AVT  G ++++G G++    LGHG       P+ I +
Sbjct: 324 RLVESL-AFTSVDFVACGEFHTCAVTMAGELFTWGDGTHNAGLLGHGTDVSHWIPKRI-S 381

Query: 318 FRRKGIHVVRVSAGDEHVV 336
              +G+ V  V+ G  H  
Sbjct: 382 GPLEGLQVASVTCGPWHTA 400


>gi|327277952|ref|XP_003223727.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Anolis carolinensis]
          Length = 1052

 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 68/225 (30%), Positives = 107/225 (47%), Gaps = 6/225 (2%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           ++ G  HTL +++   V++ G +  G LG  P T +     R I   S   +VQV+    
Sbjct: 89  VSCGEAHTLTLNDKGQVYAWGFAADGQLGL-PGTEEYTRVPRNIKSLSDVQIVQVACGYY 147

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  + +  +VF+ G N     G     +    P+L+++L G+P  Q+ AG   +  LT+
Sbjct: 148 HSLALSKGSEVFSWGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIAAGGAHSFALTL 207

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V   G N  GQLG  D  DR  P  +  L     +V I+ G  +  A+T  G V++F
Sbjct: 208 SGAVFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYISCGEDHTAALTKEGGVFTF 266

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           G+G    LGH     E+ PR +  F   G  V +++ G +H  A 
Sbjct: 267 GAGGYGQLGHNSTGHEINPRKV--FELMGNIVTQIACGRQHTSAF 309



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 65/224 (29%), Positives = 106/224 (47%), Gaps = 7/224 (3%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +     ++    A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKRP---EQVGALDAQNIVAVSCGEAHTLTLN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G  +    G   T      PR +++L  V   QV  G   +  L+    V +
Sbjct: 101 DKGQVYAWGFAADGQLGLPGTEEYTRVPRNIKSLSDVQIVQVACGYYHSLALSKGSEVFS 160

Query: 240 CGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N HGQLG G  L + T P+ I  L  +    QIAAG ++  A+T +G V+ +G    
Sbjct: 161 WGQNKHGQLGLGYDLKKQTSPQLIKSLLGI-PFGQIAAGGAHSFALTLSGAVFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
             LG  +++D   P  +++ R + I  V +S G++H  AL   G
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYISCGEDHTAALTKEG 261



 Score = 78.6 bits (192), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 98/206 (47%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S  S VFS G +  G LG G +  +  S   I         Q++A  
Sbjct: 140 VQVACGYYHSLALSKGSEVFSWGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG VF  G N     G  D N   + P L+++L+      ++ G + T  LT
Sbjct: 200 AHSFALTLSGAVFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYISCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +G++V QIA G  +  A V   G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTGHEINPRKV--FELMGNIVTQIACGRQHTSAFVPSTGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGMGSTSNRKSPFPVK 342



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 68/213 (31%), Positives = 97/213 (45%), Gaps = 9/213 (4%)

Query: 135 GSSLCGVLGHGPETTQCV-SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V    R NF     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEVVLEPRRCNFFLNKTVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 253
             GH  + +   RP  V AL       V+ G   T  L  +G V+  G    GQLG   T
Sbjct: 65  QLGHEKSRK---RPEQVGALDAQNIVAVSCGEAHTLTLNDKGQVYAWGFAADGQLGLPGT 121

Query: 254 LDRP-TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
            +    P++I  L +V  +VQ+A G  + LA++    V+S+G   +  LG G +   +  
Sbjct: 122 EEYTRVPRNIKSLSDV-QIVQVACGYYHSLALSKGSEVFSWGQNKHGQLGLGYDLKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           P+ I++    GI   +++AG  H  AL  SG V
Sbjct: 181 PQLIKSLL--GIPFGQIAAGGAHSFALTLSGAV 211


>gi|74204005|dbj|BAE29004.1| unnamed protein product [Mus musculus]
          Length = 926

 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 75/245 (30%), Positives = 117/245 (47%), Gaps = 27/245 (11%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 165
           +Q  +G +H+LL+ SN  V+SCG +  G LG         PE  Q ++          HV
Sbjct: 25  LQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQALN--------DLHV 76

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
             VS  + H+  V   G+VF  G  S    G  +     F P  ++AL G+   QV+ G 
Sbjct: 77  DLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGH 136

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             +  L+  GHV + G N+ GQLG G ++  +  P+ +  LE +  + Q+AAG ++  A+
Sbjct: 137 YHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGI-PLAQVAAGGTHSFAL 195

Query: 285 TGNGVVYSFGSGSN----FCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
           +  G   SFG GSN      L   +  +++ +P +I     K + V+ +S G EH   L 
Sbjct: 196 SLTGT--SFGWGSNRSGQLALSGNKVKEQIYKPHSIGAL--KNLSVIYISCGYEHTAVLT 251

Query: 340 SSGYV 344
             G V
Sbjct: 252 EEGQV 256



 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/184 (27%), Positives = 97/184 (52%), Gaps = 6/184 (3%)

Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
           S   ++Q ++ E+H+  +  + +V++CGDNS    G R  ++   RP  ++AL  +    
Sbjct: 20  SGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQR-RDQSTERPEPIQALNDLHVDL 78

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPS 279
           V+ G   +  +  +G V   G+ + GQLG G+  +    P  I  L  +  ++Q++ G  
Sbjct: 79  VSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGI-KIIQVSCGHY 137

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           + LA++ +G V+S+G  S   LG G+    +  P+ +++   +GI + +V+AG  H  AL
Sbjct: 138 HSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSL--EGIPLAQVAAGGTHSFAL 195

Query: 339 DSSG 342
             +G
Sbjct: 196 SLTG 199



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 62/226 (27%), Positives = 106/226 (46%), Gaps = 8/226 (3%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           ++ G+ H++ + +   VF+ G+   G LG G         T+I   +   ++QVS    H
Sbjct: 79  VSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGHYH 138

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           +  + + G VF+ G NS    G    +R    P+ V++L+G+P  QV AG   +  L++ 
Sbjct: 139 SLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLT 198

Query: 235 GHVHTCGSNTHGQLG-HGDTLDRP--TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           G     GSN  GQL   G+ +      P SI  L+ + SV+ I+ G  +   +T  G V+
Sbjct: 199 GTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNL-SVIYISCGYEHTAVLTEEGQVF 257

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           +FG  S+  L    +  +  P+ I+     G  V ++     H +A
Sbjct: 258 TFGGNSSGQLQPSPRSGQRGPQLIEGI---GGRVSQIECASYHTIA 300



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 71/141 (50%), Gaps = 5/141 (3%)

Query: 206 RPRLVEA-LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
           +PR ++A   G+   Q  +G + +  L     V++CG N+ GQLG         P+ I  
Sbjct: 11  KPRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQA 70

Query: 265 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGI 323
           L ++  V  ++ G  + +AV   G V+++G+GS   LG GE +     P  I+     GI
Sbjct: 71  LNDL-HVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKAL--AGI 127

Query: 324 HVVRVSAGDEHVVALDSSGYV 344
            +++VS G  H +AL   G+V
Sbjct: 128 KIIQVSCGHYHSLALSEDGHV 148


>gi|50418309|gb|AAH77375.1| MGC81587 protein [Xenopus laevis]
          Length = 677

 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 106/231 (45%), Gaps = 5/231 (2%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           ++ G  HTL +++   VFS G +  G +G             I   S   +VQV+   +H
Sbjct: 89  VSCGEAHTLALNDKGQVFSWGHAAHGQIGVSIAEDYIRVPRNIKSLSDIQIVQVACGHHH 148

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           +  + +   +++ G N     G     R    PR +++L G+P   + AG   +  LTI 
Sbjct: 149 SLALSKESNIYSWGQNQYGQLGLGSEKRKESAPRHIKSLSGIPFAHIAAGGGHSFALTIS 208

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G +   G N  GQLG  D  DR  P  +  L     ++ I  G  +  A+T  G V++FG
Sbjct: 209 GAIFGWGRNKFGQLGLNDETDRSDPALLKSLRS-QKIIYICCGEDHTAALTKEGGVFTFG 267

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYV 344
           +G    LGH     E+ PR +  F   G  V +++ G +H +A + SSG +
Sbjct: 268 AGGYGQLGHNSASHEVNPRKV--FELMGNIVTQIACGRQHTLAFVPSSGRI 316



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 101/207 (48%), Gaps = 8/207 (3%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G +H+L +S  S+++S G +  G LG G E  +  +   I   S      ++A  
Sbjct: 140 VQVACGHHHSLALSKESNIYSWGQNQYGQLGLGSEKRKESAPRHIKSLSGIPFAHIAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
            H+  +  SG +F  G N     G  D T+R    P L+++L+      +  G + T  L
Sbjct: 200 GHSFALTISGAIFGWGRNKFGQLGLNDETDRS--DPALLKSLRSQKIIYICCGEDHTAAL 257

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGV 289
           T  G V T G+  +GQLGH        P+ +   E +G++V QIA G  + LA V  +G 
Sbjct: 258 TKEGGVFTFGAGGYGQLGHNSASHEVNPRKV--FELMGNIVTQIACGRQHTLAFVPSSGR 315

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQ 316
           +YSFG G N  LG G   ++  P  ++
Sbjct: 316 IYSFGLGGNGQLGIGSTSNKKSPSMVK 342



 Score = 74.3 bits (181), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 61/191 (31%), Positives = 88/191 (46%), Gaps = 8/191 (4%)

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           R +F    +V  V     H  FVL  G V+TCG N     GH  + +   +P  V AL  
Sbjct: 27  RCDFFINKNVRDVGCGNRHTGFVLDDGTVYTCGCNDLGQLGHDKSRK---KPEQVGALDA 83

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQI 274
                V+ G   T  L  +G V + G   HGQ+G     D    P++I  L ++  +VQ+
Sbjct: 84  QIIVAVSCGEAHTLALNDKGQVFSWGHAAHGQIGVSIAEDYIRVPRNIKSLSDI-QIVQV 142

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           A G  + LA++    +YS+G      LG G E+  E  PR I++    GI    ++AG  
Sbjct: 143 ACGHHHSLALSKESNIYSWGQNQYGQLGLGSEKRKESAPRHIKSL--SGIPFAHIAAGGG 200

Query: 334 HVVALDSSGYV 344
           H  AL  SG +
Sbjct: 201 HSFALTISGAI 211



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 69/136 (50%), Gaps = 6/136 (4%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  +       + V  G   TGF+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VIEPRRCDFFINKNVRDVGCGNRHTGFVLDDGTVYTCGCNDLGQLGHDKS--RKKPEQVG 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKG 322
            L +   +V ++ G ++ LA+   G V+S+G  ++  +G     D ++ PR I++     
Sbjct: 80  AL-DAQIIVAVSCGEAHTLALNDKGQVFSWGHAAHGQIGVSIAEDYIRVPRNIKSL--SD 136

Query: 323 IHVVRVSAGDEHVVAL 338
           I +V+V+ G  H +AL
Sbjct: 137 IQIVQVACGHHHSLAL 152


>gi|255570334|ref|XP_002526126.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223534503|gb|EEF36202.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1114

 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 57/168 (33%), Positives = 88/168 (52%), Gaps = 7/168 (4%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           HAA V + G+VFT G+ S    GH    + + +PRLVE+L       V  G   T  +T+
Sbjct: 291 HAALVTRQGEVFTWGEESGGRLGH-GVGKDVIQPRLVESLAVSTVDFVACGEFHTCAVTM 349

Query: 234 RGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            G ++T G  TH  G LGHG+ +    PK I+ PLE +  V  +  GP +   VT  G +
Sbjct: 350 AGEIYTWGDGTHNAGLLGHGNDVSHWIPKRISGPLEGL-QVASVTCGPWHTALVTSTGQL 408

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           ++FG G+   LGHG++ +   PR +++    G+  +  + G  H  A+
Sbjct: 409 FTFGDGTFGVLGHGDRENVAYPREVESL--SGLRTIAAACGVWHTAAV 454



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 70/236 (29%), Positives = 108/236 (45%), Gaps = 19/236 (8%)

Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           +T G +HT L+ S   +F+ G    GVLGHG    + V++ R +   S    +  +    
Sbjct: 392 VTCGPWHTALVTSTGQLFTFGDGTFGVLGHGDR--ENVAYPREVESLSGLRTIAAACGVW 449

Query: 174 HAAFVLQ-----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           H A V++           SG++FT GD      GH D   P  +P  V AL      ++ 
Sbjct: 450 HTAAVVEVIVTQSSSSISSGKLFTWGDGDKNRLGHGD-KEPRLKPTCVPALIDYNFHKIA 508

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
            G + T  LT  GHV   GS  +GQLG+    D   P  +       SV +IA G  ++ 
Sbjct: 509 CGHSLTVGLTTSGHVFAMGSTVYGQLGN-PYADGKLPCLVEDKLSGESVEEIACGAYHVA 567

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            +T    VY++G G+N  LGHG+  D   P  ++  + +  HV  ++ G  +  A+
Sbjct: 568 VLTSRNEVYTWGKGANGRLGHGDIEDRKAPILVEALKDR--HVKYIACGANYTAAI 621



 Score = 71.2 bits (173), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 62/245 (25%), Positives = 105/245 (42%), Gaps = 31/245 (12%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSASE 172
           R+  L+     VF+ G    G LGHG       P   + ++ + ++F        V+  E
Sbjct: 290 RHAALVTRQGEVFTWGEESGGRLGHGVGKDVIQPRLVESLAVSTVDF--------VACGE 341

Query: 173 NHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            H   V  +G+++T GD +  +   GH +        R+   L+G+    VT G   T  
Sbjct: 342 FHTCAVTMAGEIYTWGDGTHNAGLLGHGNDVSHWIPKRISGPLEGLQVASVTCGPWHTAL 401

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT----- 285
           +T  G + T G  T G LGHGD  +   P+ +  L  + ++   A G  +  AV      
Sbjct: 402 VTSTGQLFTFGDGTFGVLGHGDRENVAYPREVESLSGLRTIA-AACGVWHTAAVVEVIVT 460

Query: 286 ------GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
                  +G ++++G G    LGHG++   L+P  +        H  +++ G    V L 
Sbjct: 461 QSSSSISSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFH--KIACGHSLTVGLT 518

Query: 340 SSGYV 344
           +SG+V
Sbjct: 519 TSGHV 523



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 69/145 (47%), Gaps = 4/145 (2%)

Query: 200 TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP 259
           T   +  PR +E+   +    +  G+     +T +G V T G  + G+LGHG   D   P
Sbjct: 264 TRADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDVIQP 323

Query: 260 KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQT 317
           + +  L  V +V  +A G  +  AVT  G +Y++G G++    LGHG       P+ I +
Sbjct: 324 RLVESL-AVSTVDFVACGEFHTCAVTMAGEIYTWGDGTHNAGLLGHGNDVSHWIPKRI-S 381

Query: 318 FRRKGIHVVRVSAGDEHVVALDSSG 342
              +G+ V  V+ G  H   + S+G
Sbjct: 382 GPLEGLQVASVTCGPWHTALVTSTG 406


>gi|408681154|ref|YP_006880981.1| RCC1 repeat domain protein [Streptomyces venezuelae ATCC 10712]
 gi|328885483|emb|CCA58722.1| RCC1 repeat domain protein [Streptomyces venezuelae ATCC 10712]
          Length = 394

 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 66/189 (34%), Positives = 100/189 (52%), Gaps = 10/189 (5%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L+ + +V S G++  G LG+G  T Q    T     + + V +VSA  NHA   ++ G+V
Sbjct: 90  LLKDGTVKSWGNNTTGQLGNGTTTAQPFPAT---VAALSGVSEVSAGLNHA-LAVKGGRV 145

Query: 185 FTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
              G+N+S   G  +DT  P   P  V++L  V  K V AG +F+  L   G V T G  
Sbjct: 146 LAWGNNASKQLGTGQDTTTPYKAPIPVQSLDKV--KDVGAGCDFSVALRQDGTVWTWGKG 203

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 303
            +G+LG G+   R TP+ +  L +V SV   A G  ++LA+T +GVV ++G G+   LG+
Sbjct: 204 DNGRLGTGNNTTRETPQKVPDLADVESV---AVGCEHVLALTADGVVKAWGKGAEGQLGN 260

Query: 304 GEQHDELQP 312
               D  +P
Sbjct: 261 DSTADSSRP 269



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 67/234 (28%), Positives = 97/234 (41%), Gaps = 20/234 (8%)

Query: 111 AGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
           +G  +++ G  H L +    V + G++    LG G +TT       I   S   V  V A
Sbjct: 125 SGVSEVSAGLNHALAVKGGRVLAWGNNASKQLGTGQDTTTPYK-APIPVQSLDKVKDVGA 183

Query: 171 SENHAAFVLQSGQVFTCG--DNSSFCCGHRDTNR-PIFRPRL--VEALKGVPCKQVTAGL 225
             + +  + Q G V+T G  DN     G+  T   P   P L  VE++  V C+ V A  
Sbjct: 184 GCDFSVALRQDGTVWTWGKGDNGRLGTGNNTTRETPQKVPDLADVESVA-VGCEHVLA-- 240

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
                LT  G V   G    GQLG+  T D   P  +A L+ V +V   +A      AV 
Sbjct: 241 -----LTADGVVKAWGKGAEGQLGNDSTADSSRPVDVAHLDAVATVFATSA---SGFAVL 292

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
            +G V  +G  +   LG G   +   P  +     KG+  +   A D  + ALD
Sbjct: 293 DDGSVAGWGKNAERQLGDGTNANRTTPVVLDHL--KGVQSIAGGA-DFTLAALD 343


>gi|189241718|ref|XP_968558.2| PREDICTED: similar to hect domain and RLD 2 [Tribolium castaneum]
          Length = 4733

 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 70/235 (29%), Positives = 109/235 (46%), Gaps = 21/235 (8%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSAS 171
            G++   L  +  VFS G    G LGHG       P+  + +   +I          ++  
Sbjct: 2990 GKHAMALTLDGKVFSWGEGEDGKLGHGNRLNLDKPKMIEALRSKKIR--------DIACG 3041

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TG 229
             +H+A +  SG+++T G       GH D N    +P+L+++L G    QV  G     T 
Sbjct: 3042 SSHSAAITSSGELYTWGLGEYGRLGHGD-NITQLKPKLIKSLVGHRIVQVACGSRDAQTL 3100

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             LT  G V + G    G+LG G +     P +I  L  +  VVQI  G  + LA+T  G 
Sbjct: 3101 ALTDEGWVFSWGDGDFGKLGRGGSEGCNIPHNIERLNAL-EVVQIECGAQFSLALTKTGE 3159

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            V+++G G  F LGHG      +P  I++ + K   V+ V+ G  H +A+  +G V
Sbjct: 3160 VWTWGKGDYFRLGHGSDQHVRKPTVIESLKDK--KVIHVAVGALHCLAVTDTGQV 3212



 Score = 85.1 bits (209), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 67/252 (26%), Positives = 115/252 (45%), Gaps = 14/252 (5%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSF 154
             L+S++H           + + +G  H L +S ++ V+S G    G LGHG     C + 
Sbjct: 3948 LLESIQH------VFIKKIAVNSGGKHCLALSADNDVYSWGEGDDGKLGHGNRLA-CETP 4000

Query: 155  TRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK 214
              I       ++ ++    H+A +  +GQ++T G       GH D+   + +P+L+E L 
Sbjct: 4001 KLIEALQGYEIIDIACGGAHSAAITSTGQLYTWGKGRYGRLGHGDSEDQL-KPKLIEELV 4059

Query: 215  GVPCKQVTAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
            G     V  G      L I    +V + G   +G+LG G +     PK I  L  +G V+
Sbjct: 4060 GYKVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKVPKKIESLAGLG-VI 4118

Query: 273  QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
            ++  G  + +A+T +G VY++G G    LGHG      +P+ +     +G  ++ ++ G 
Sbjct: 4119 KVECGSQFSVALTRSGSVYTWGKGDYHRLGHGTGEHVRRPKKVAAL--QGKKIISIATGS 4176

Query: 333  EHVVALDSSGYV 344
             H VA    G V
Sbjct: 4177 LHCVACSDEGEV 4188



 Score = 84.7 bits (208), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 64/228 (28%), Positives = 109/228 (47%), Gaps = 7/228 (3%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G+++  L  +  V+S G+   G LGHG  +T+    T I       ++ V     ++A +
Sbjct: 524 GKHYLALTKDYEVYSWGNGDGGRLGHGDTSTK-EEPTLIQALKGKDIIDVECGGTYSAAI 582

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI--RGH 236
             +G ++T G  +    GH  T      P ++ AL      +V  G  +   L I  +G 
Sbjct: 583 SANGALYTWGRGNYGRLGH-GTAEDCLTPTMISALSDEHIIKVACGSFYAHTLCITSQGK 641

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           V++ G   +G+LG G +     P+ I  L+ V  +VQ+  G  + +A++ +G VY++G G
Sbjct: 642 VYSWGDGDYGKLGRGGSDGSKLPRLIEKLQNV-KIVQVYCGAQFSVALSEDGHVYTWGKG 700

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             + LGH  + +   P  ++  R +   VV VS G  HV+AL   G V
Sbjct: 701 EGWKLGHPTEENVRFPEMVEVLRDR--KVVGVSLGVSHVLALTDQGEV 746



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 107/230 (46%), Gaps = 13/230 (5%)

Query: 104 SDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA 163
            DI++   G      G Y   + +N ++++ G    G LGHG     C++ T I+  S  
Sbjct: 567 KDIIDVECG------GTYSAAISANGALYTWGRGNYGRLGHG-TAEDCLTPTMISALSDE 619

Query: 164 HVVQVSASE--NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
           H+++V+      H   +   G+V++ GD      G   ++     PRL+E L+ V   QV
Sbjct: 620 HIIKVACGSFYAHTLCITSQGKVYSWGDGDYGKLGRGGSDGSKL-PRLIEKLQNVKIVQV 678

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
             G  F+  L+  GHV+T G     +LGH    +   P+ +  L +   VV ++ G S++
Sbjct: 679 YCGAQFSVALSEDGHVYTWGKGEGWKLGHPTEENVRFPEMVEVLRD-RKVVGVSLGVSHV 737

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
           LA+T  G VY +G   N  +    +    QPR I+    KG  VV V  G
Sbjct: 738 LALTDQGEVYGWGKNENKQICDSSELFVQQPRLIEAL--KGQKVVGVCCG 785



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 69/222 (31%), Positives = 109/222 (49%), Gaps = 15/222 (6%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHV--VQVSASENHAAFVLQSGQVFT 186
             +++CG    G LG G      V + R I F S   +  V V +   HA  +   G+VF+
Sbjct: 2947 KLYACGEGTNGRLGLGHSNN--VPYPRPIPFLSQYVIKKVAVHSGGKHAMALTLDGKVFS 3004

Query: 187  CGDNSSFCCGHRDTNR-PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH 245
             G+      GH   NR  + +P+++EAL+    + +  G + +  +T  G ++T G   +
Sbjct: 3005 WGEGEDGKLGH--GNRLNLDKPKMIEALRSKKIRDIACGSSHSAAITSSGELYTWGLGEY 3062

Query: 246  GQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLG 302
            G+LGHGD + +  PK I  L  VG  +VQ+A G   +  LA+T  G V+S+G G    LG
Sbjct: 3063 GRLGHGDNITQLKPKLIKSL--VGHRIVQVACGSRDAQTLALTDEGWVFSWGDGDFGKLG 3120

Query: 303  HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             G       P  I+  R   + VV++  G +  +AL  +G V
Sbjct: 3121 RGGSEGCNIPHNIE--RLNALEVVQIECGAQFSLALTKTGEV 3160



 Score = 68.2 bits (165), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 98/225 (43%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  I++S  +++ G    G LGHG   TQ +    I       +VQV+     
Sbjct: 3038 IACGSSHSAAITSSGELYTWGLGEYGRLGHGDNITQ-LKPKLIKSLVGHRIVQVACGSRD 3096

Query: 175  AAFV--LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A  +     G VF+ GD      G R  +     P  +E L  +   Q+  G  F+  LT
Sbjct: 3097 AQTLALTDEGWVFSWGDGDFGKLG-RGGSEGCNIPHNIERLNALEVVQIECGAQFSLALT 3155

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG       P  I  L++   V+ +A G  + LAVT  G VY+
Sbjct: 3156 KTGEVWTWGKGDYFRLGHGSDQHVRKPTVIESLKD-KKVIHVAVGALHCLAVTDTGQVYA 3214

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +     + +H+ RV+ G  H +A
Sbjct: 3215 WGDNDHGQQGNGTTIVNRKPALVHGL--EDVHINRVACGSSHSIA 3257



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 97/219 (44%), Gaps = 29/219 (13%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
           VF  G     + G GP+    +S   I         Q+  S+     + Q+G+VF    +
Sbjct: 448 VFGWGW-FSWIFGVGPQNCDTLSELTIK--------QICCSDRTILILTQTGKVFFMYYS 498

Query: 191 SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA---GLNFTGFLTIRGHVHTCGSNTHGQ 247
           S   C           P+ +  L G+   ++ A   G ++   LT    V++ G+   G+
Sbjct: 499 SDTQC-----------PQEMTGLSGINMIKIAAHPEGKHYLA-LTKDYEVYSWGNGDGGR 546

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 307
           LGHGDT  +  P  I  L+    ++ +  G +Y  A++ NG +Y++G G+   LGHG   
Sbjct: 547 LGHGDTSTKEEPTLIQALKG-KDIIDVECGGTYSAAISANGALYTWGRGNYGRLGHGTAE 605

Query: 308 DELQPRAIQTFRRKGIHVVRVSAGD--EHVVALDSSGYV 344
           D L P  I     +  H+++V+ G    H + + S G V
Sbjct: 606 DCLTPTMISALSDE--HIIKVACGSFYAHTLCITSQGKV 642



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/161 (29%), Positives = 76/161 (47%), Gaps = 3/161 (1%)

Query: 125  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
            L     VFS G    G LG G  +  C     I   +A  VVQ+      +  + ++G+V
Sbjct: 3102 LTDEGWVFSWGDGDFGKLGRGG-SEGCNIPHNIERLNALEVVQIECGAQFSLALTKTGEV 3160

Query: 185  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
            +T G    F  GH  +++ + +P ++E+LK      V  G      +T  G V+  G N 
Sbjct: 3161 WTWGKGDYFRLGH-GSDQHVRKPTVIESLKDKKVIHVAVGALHCLAVTDTGQVYAWGDND 3219

Query: 245  HGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            HGQ G+G T+    P  +  LE+V  + ++A G S+ +A T
Sbjct: 3220 HGQQGNGTTIVNRKPALVHGLEDV-HINRVACGSSHSIAWT 3259



 Score = 40.0 bits (92), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 64/137 (46%), Gaps = 3/137 (2%)

Query: 207  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            P   EAL  +   Q+  G      +T  G V+  G    G+LG G T     P  +  ++
Sbjct: 3894 PTPCEALSTLRPVQLVGGEQTLFAVTADGKVYATGYGAGGRLGIGGTDSVLVPTLLESIQ 3953

Query: 267  EVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
             V    + + +G  + LA++ +  VYS+G G +  LGHG +     P+ I+    +G  +
Sbjct: 3954 HVFIKKIAVNSGGKHCLALSADNDVYSWGEGDDGKLGHGNRLACETPKLIEAL--QGYEI 4011

Query: 326  VRVSAGDEHVVALDSSG 342
            + ++ G  H  A+ S+G
Sbjct: 4012 IDIACGGAHSAAITSTG 4028



 Score = 40.0 bits (92), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 7/113 (6%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP ++++ L  V    Q+  G   + AVT +G VY
Sbjct: 3870 GTIYGWGHNHRGQLGGIEGAKVKIPTPCEALSTLRPV----QLVGGEQTLFAVTADGKVY 3925

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            + G G+   LG G     L P  +++ +   I  + V++G +H +AL +   V
Sbjct: 3926 ATGYGAGGRLGIGGTDSVLVPTLLESIQHVFIKKIAVNSGGKHCLALSADNDV 3978


>gi|255085030|ref|XP_002504946.1| predicted protein [Micromonas sp. RCC299]
 gi|226520215|gb|ACO66204.1| predicted protein [Micromonas sp. RCC299]
          Length = 526

 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 83/247 (33%), Positives = 108/247 (43%), Gaps = 39/247 (15%)

Query: 131 VFSCGSSLCGVLGHGPET-------TQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSG 182
           V SCG+   G LGHG +            +F R+   P    VV  SA  +H A V   G
Sbjct: 117 VVSCGNGDFGRLGHGGDGRGRAGLGMSAETFQRMTGIPQGLDVVSASAGGSHTAVVTADG 176

Query: 183 QVFTCGDNSSFCCGH-RDTNR-PIFRPRLVEALKGVPCKQ----VTAGLNFTGFLTIRGH 236
            V+TCG N     GH  D    PI RP     + G+P       V+AG + T  +T  G 
Sbjct: 177 AVYTCGLNEHGQLGHSHDAGYVPILRP-----VSGLPQHDRVVAVSAGHHHTVCVTEGGE 231

Query: 237 VHTCGSNTHGQ--LGHGDTLDRPTPKSI------APLEEVGSVVQIAAGPSYMLAVTGNG 288
           +   G N   Q  LG G     P P  I      AP    G+V+ +AAGP + LAVT  G
Sbjct: 232 LWAWGRNDASQCGLGSGAPSVVPLPAWISSASPGAPGNH-GAVMSVAAGPRHNLAVTDRG 290

Query: 289 VVYSFGSGSNFCLGHGEQHD-----------ELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            VY++G G    LGHG               E  PR +++    GI V   +AG  H V 
Sbjct: 291 AVYTWGDGKEGVLGHGADESWRWGFWGRDTTEPAPRLVRSLADDGIEVASAAAGLCHSVC 350

Query: 338 LDSSGYV 344
           +D +G+V
Sbjct: 351 VDRTGHV 357



 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/239 (26%), Positives = 99/239 (41%), Gaps = 31/239 (12%)

Query: 93  VLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSS-VFSCG---SSLCGVLGHGPET 148
           +LR +  +     +V  SAG+       +HT+ ++    +++ G   +S CG+    P  
Sbjct: 200 ILRPVSGLPQHDRVVAVSAGH-------HHTVCVTEGGELWAWGRNDASQCGLGSGAPSV 252

Query: 149 TQCVSFTRINFPSA----AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH------- 197
               ++     P A      V+ V+A   H   V   G V+T GD      GH       
Sbjct: 253 VPLPAWISSASPGAPGNHGAVMSVAAGPRHNLAVTDRGAVYTWGDGKEGVLGHGADESWR 312

Query: 198 -----RDTNRPIFRPRLVEAL--KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH 250
                RDT  P   PRLV +L   G+      AGL  +  +   GHVH  G     QLG 
Sbjct: 313 WGFWGRDTTEPA--PRLVRSLADDGIEVASAAAGLCHSVCVDRTGHVHAWGQGRFNQLGV 370

Query: 251 GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE 309
           G             +  +G V  +AAG ++ +AV  +G + S+G+  N  LG G  +D+
Sbjct: 371 GAKNAPAFTTEPTRVPALGRVRDLAAGGNFNVAVGADGSMISWGANGNGELGLGNSNDK 429



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 63/233 (27%), Positives = 99/233 (42%), Gaps = 30/233 (12%)

Query: 97  LQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR 156
           +  +    D+V  SAG      G +  ++ ++ +V++CG +  G LGH  +         
Sbjct: 150 MTGIPQGLDVVSASAG------GSHTAVVTADGAVYTCGLNEHGQLGHSHDAGYVPILRP 203

Query: 157 IN-FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRP---RLVEA 212
           ++  P    VV VSA  +H   V + G+++  G N +  CG   +  P   P    +  A
Sbjct: 204 VSGLPQHDRVVAVSAGHHHTVCVTEGGELWAWGRNDASQCG-LGSGAPSVVPLPAWISSA 262

Query: 213 LKGVPCKQ-----VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG------------DTLD 255
             G P        V AG      +T RG V+T G    G LGHG            DT +
Sbjct: 263 SPGAPGNHGAVMSVAAGPRHNLAVTDRGAVYTWGDGKEGVLGHGADESWRWGFWGRDTTE 322

Query: 256 RPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 307
            P P+ +  L + G  V   AAG  + + V   G V+++G G    LG G ++
Sbjct: 323 -PAPRLVRSLADDGIEVASAAAGLCHSVCVDRTGHVHAWGQGRFNQLGVGAKN 374


>gi|356501403|ref|XP_003519514.1| PREDICTED: uncharacterized protein LOC100806439 [Glycine max]
          Length = 1109

 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 56/177 (31%), Positives = 93/177 (52%), Gaps = 7/177 (3%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  ++    HAA V + G++F+ G+ +    GH   +  +  P+L+EAL     + V  G
Sbjct: 312 VQNIACGGRHAALVTKQGEIFSWGEEAGGRLGH-GVDSDVLHPKLIEALSNTNIELVACG 370

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYM 281
              T  +T+ G ++T G+ T+  G LGHG+ +    PK +  PLE +  V  I+ GP + 
Sbjct: 371 EYHTCAVTLSGDLYTWGNGTYNCGLLGHGNQVSHWVPKRVNGPLEGI-HVSYISCGPWHT 429

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             VT  G +++FG G+   LGHG++     PR +++   KG+  VR + G  H  A+
Sbjct: 430 AVVTSAGQLFTFGDGTFGALGHGDRKSVSLPREVESL--KGLRTVRAACGVWHTAAV 484



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 67/213 (31%), Positives = 99/213 (46%), Gaps = 19/213 (8%)

Query: 100 VEHSSDIVETSAGNMQITT-GRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFT 155
           V H   I   S  N+++   G YHT  ++ S     +  G+  CG+LGHG + +  V   
Sbjct: 350 VLHPKLIEALSNTNIELVACGEYHTCAVTLSGDLYTWGNGTYNCGLLGHGNQVSHWVP-K 408

Query: 156 RINFP-SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK 214
           R+N P    HV  +S    H A V  +GQ+FT GD +    GH D  + +  PR VE+LK
Sbjct: 409 RVNGPLEGIHVSYISCGPWHTAVVTSAGQLFTFGDGTFGALGHGD-RKSVSLPREVESLK 467

Query: 215 GVPCKQVTAGLNFTGFLT------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           G+   +   G+  T  +               G + T G    G+LGHGD   +  P  +
Sbjct: 468 GLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTRV 527

Query: 263 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
           A +    +  Q+A G S  +A+T  G VY+ GS
Sbjct: 528 ALVNVKPNFCQVACGHSLTVALTTKGHVYTMGS 560



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 103/227 (45%), Gaps = 21/227 (9%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           I+ G +HT +++++  +F+ G    G LGHG    + VS  R +        V+ +    
Sbjct: 422 ISCGPWHTAVVTSAGQLFTFGDGTFGALGHGDR--KSVSLPREVESLKGLRTVRAACGVW 479

Query: 174 HAAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK-- 219
           H A V++            SG++FT GD      GH D    +   R+  AL  V     
Sbjct: 480 HTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTRV--ALVNVKPNFC 537

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
           QV  G + T  LT +GHV+T GS  +GQLG     D   P  +        V +IA G  
Sbjct: 538 QVACGHSLTVALTTKGHVYTMGSPVYGQLGIPQA-DGKLPICVEWKLSESFVEEIACGAY 596

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
           ++  +T    VY++G G+N  LGHG+  D   P  ++  + K +  +
Sbjct: 597 HVAVLTSRTEVYTWGKGANGRLGHGDTDDRNTPTLVEALKDKDVKSI 643



 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 66/247 (26%), Positives = 105/247 (42%), Gaps = 31/247 (12%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSAS 171
           GR+  L+     +FS G    G LGHG       P+  + +S T I          V+  
Sbjct: 319 GRHAALVTKQGEIFSWGEEAGGRLGHGVDSDVLHPKLIEALSNTNIEL--------VACG 370

Query: 172 ENHAAFVLQSGQVFTCGDNSSFC--CGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
           E H   V  SG ++T G+ +  C   GH +        R+   L+G+    ++ G   T 
Sbjct: 371 EYHTCAVTLSGDLYTWGNGTYNCGLLGHGNQVSHWVPKRVNGPLEGIHVSYISCGPWHTA 430

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT---- 285
            +T  G + T G  T G LGHGD      P+ +  L+ +   V+ A G  +  AV     
Sbjct: 431 VVTSAGQLFTFGDGTFGALGHGDRKSVSLPREVESLKGL-RTVRAACGVWHTAAVVEVMV 489

Query: 286 --------GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
                    +G ++++G G    LGHG++  +L P  +     K  +  +V+ G    VA
Sbjct: 490 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTRVALVNVK-PNFCQVACGHSLTVA 548

Query: 338 LDSSGYV 344
           L + G+V
Sbjct: 549 LTTKGHV 555



 Score = 57.8 bits (138), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 69/140 (49%), Gaps = 4/140 (2%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E+   +  + +  G      +T +G + + G    G+LGHG   D   PK I  L 
Sbjct: 301 PKSLESAVVLDVQNIACGGRHAALVTKQGEIFSWGEEAGGRLGHGVDSDVLHPKLIEALS 360

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIH 324
              ++  +A G  +  AVT +G +Y++G+G+  C  LGHG Q     P+ +     +GIH
Sbjct: 361 NT-NIELVACGEYHTCAVTLSGDLYTWGNGTYNCGLLGHGNQVSHWVPKRVNG-PLEGIH 418

Query: 325 VVRVSAGDEHVVALDSSGYV 344
           V  +S G  H   + S+G +
Sbjct: 419 VSYISCGPWHTAVVTSAGQL 438



 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 54/197 (27%), Positives = 86/197 (43%), Gaps = 17/197 (8%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQC 151
           R +R    V H++ +VE       +  G   +   S+  +F+ G    G LGHG +  + 
Sbjct: 470 RTVRAACGVWHTAAVVE-------VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKL 522

Query: 152 VSFTRINFPSAA-HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCG--HRDTNRPI-FRP 207
           V  TR+   +   +  QV+   +    +   G V+T G       G    D   PI    
Sbjct: 523 VP-TRVALVNVKPNFCQVACGHSLTVALTTKGHVYTMGSPVYGQLGIPQADGKLPICVEW 581

Query: 208 RLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE 267
           +L E+      +++  G      LT R  V+T G   +G+LGHGDT DR TP  +  L++
Sbjct: 582 KLSESF----VEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNTPTLVEALKD 637

Query: 268 VGSVVQIAAGPSYMLAV 284
              V  IA G ++  A+
Sbjct: 638 -KDVKSIACGTNFTAAI 653


>gi|157119218|ref|XP_001653306.1| regulator of chromosome condensation [Aedes aegypti]
 gi|108875404|gb|EAT39629.1| AAEL008575-PA [Aedes aegypti]
          Length = 478

 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 113/251 (45%), Gaps = 30/251 (11%)

Query: 122 HTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           H++LI+ +    + G +  G LG   E       T +      +V+Q +   NH  F+  
Sbjct: 120 HSVLITLDRKALAFGRNQFGQLGQS-ELRTFEKPTPVTGLEEVNVIQAACGRNHTLFLSD 178

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRP-RLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
           +G V+ CGDN S  CG  +T   I +  RL  A  G P  +V  G  F+  L I+G+V++
Sbjct: 179 TGVVYACGDNKSGQCGVGNTQPTILKATRLNYA--GPPIIKVACGAEFSMILDIKGNVYS 236

Query: 240 CGSNTHGQLGHGDTLD------------RPTPKSI------------APLEEVGSVVQIA 275
            G   +GQLGH                   +PK I             P+++V  +V  +
Sbjct: 237 FGLPEYGQLGHNTEGKYFVTSTKMSFHFETSPKKIVLYVEKTKDGHVTPIDDV-KIVDFS 295

Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
            G ++ +A+      +S+G G    LGH EQ DE+ PR I+ F  +   V+RV  G    
Sbjct: 296 CGNNHTVAIDSKNRAFSWGFGGIGRLGHAEQKDEMVPRLIKFFDIQNRKVLRVFCGSSFS 355

Query: 336 VALDSSGYVSL 346
           +A+   G + L
Sbjct: 356 LAITDIGALYL 366


>gi|148672794|gb|EDL04741.1| mCG16651 [Mus musculus]
          Length = 462

 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 72/243 (29%), Positives = 115/243 (47%), Gaps = 23/243 (9%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 165
           +Q  +G +H+LL+ SN  V+SCG +  G LG         PE  Q ++          HV
Sbjct: 25  LQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQALN--------DLHV 76

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
             VS  + H+  V   G+VF  G  S    G  +     F P  ++AL G+   QV+ G 
Sbjct: 77  DLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGH 136

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             +  L+  GHV + G N+ GQLG G ++  +  P+ +  LE +  + Q+AAG ++  A+
Sbjct: 137 YHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGI-PLAQVAAGGTHSFAL 195

Query: 285 TGNGVVYSFGSGSNFCL---GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           +  G  + +GS  +  L   G+  +    +P +I     K + V+ +S G EH   L   
Sbjct: 196 SLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGAL--KNLSVIYISCGYEHTAVLTEE 253

Query: 342 GYV 344
           G V
Sbjct: 254 GQV 256



 Score = 70.9 bits (172), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 62/226 (27%), Positives = 106/226 (46%), Gaps = 8/226 (3%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           ++ G+ H++ + +   VF+ G+   G LG G         T+I   +   ++QVS    H
Sbjct: 79  VSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGHYH 138

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           +  + + G VF+ G NS    G    +R    P+ V++L+G+P  QV AG   +  L++ 
Sbjct: 139 SLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLT 198

Query: 235 GHVHTCGSNTHGQLG-HGDTLDRP--TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           G     GSN  GQL   G+ +      P SI  L+ + SV+ I+ G  +   +T  G V+
Sbjct: 199 GTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNL-SVIYISCGYEHTAVLTEEGQVF 257

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           +FG  S+  L    +  +  P+ I+     G  V ++     H +A
Sbjct: 258 TFGGNSSGQLQPSPRSGQRGPQLIEGI---GGRVSQIECASYHTIA 300



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/184 (27%), Positives = 97/184 (52%), Gaps = 6/184 (3%)

Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
           S   ++Q ++ E+H+  +  + +V++CGDNS    G R  ++   RP  ++AL  +    
Sbjct: 20  SGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQR-RDQSTERPEPIQALNDLHVDL 78

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPS 279
           V+ G   +  +  +G V   G+ + GQLG G+  +    P  I  L  +  ++Q++ G  
Sbjct: 79  VSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGI-KIIQVSCGHY 137

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           + LA++ +G V+S+G  S   LG G+    +  P+ +++   +GI + +V+AG  H  AL
Sbjct: 138 HSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSL--EGIPLAQVAAGGTHSFAL 195

Query: 339 DSSG 342
             +G
Sbjct: 196 SLTG 199



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 71/141 (50%), Gaps = 5/141 (3%)

Query: 206 RPRLVEA-LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
           +PR ++A   G+   Q  +G + +  L     V++CG N+ GQLG         P+ I  
Sbjct: 11  KPRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQA 70

Query: 265 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGI 323
           L ++  V  ++ G  + +AV   G V+++G+GS   LG GE +     P  I+     GI
Sbjct: 71  LNDL-HVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKAL--AGI 127

Query: 324 HVVRVSAGDEHVVALDSSGYV 344
            +++VS G  H +AL   G+V
Sbjct: 128 KIIQVSCGHYHSLALSEDGHV 148


>gi|337751269|ref|YP_004645431.1| hypothetical protein KNP414_07049 [Paenibacillus mucilaginosus
           KNP414]
 gi|336302458|gb|AEI45561.1| hypothetical protein KNP414_07049 [Paenibacillus mucilaginosus
           KNP414]
          Length = 404

 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 68/243 (27%), Positives = 116/243 (47%), Gaps = 20/243 (8%)

Query: 102 HSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS 161
            S+ +V  +AG      G   T+L S+ +V++ G +  G LG+G E      F +++   
Sbjct: 32  ESTSVVSINAG------GYVSTILRSDGTVWTTGRNNVGQLGNGTEKDSSY-FGKVD--E 82

Query: 162 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
              VV + +  +H   + + G V+  G NS       +  + I RP  +  LK +   QV
Sbjct: 83  LYDVVSLDSDMDHTLAITKHGTVWGWGYNSKGEI--TEGGKNIARPVQINGLKDIV--QV 138

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
           + GL  +  L   G V + G N +GQLG+G   D   P  +   E + ++V I AG  + 
Sbjct: 139 STGLVHSLALDQSGAVWSWGENIYGQLGNGTNQDSSIPTKV---EFLSNIVAIEAGAEHS 195

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           LA++ +G V+++G      LG+GE      PR ++       ++  ++ GD H +ALD  
Sbjct: 196 LALSNDGKVWAWGRNEFGQLGNGETEKSNIPRLVKNLE----NIEMIAGGDNHSLALDHD 251

Query: 342 GYV 344
           G +
Sbjct: 252 GAI 254



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/242 (27%), Positives = 114/242 (47%), Gaps = 21/242 (8%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++TG  H+L +  S +V+S G ++ G LG+G      +  T++ F S  ++V + A  
Sbjct: 136 VQVSTGLVHSLALDQSGAVWSWGENIYGQLGNGTNQDSSIP-TKVEFLS--NIVAIEAGA 192

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +   G+V+  G N     G+ +T +    PRLV+ L+ +  + +  G N +  L 
Sbjct: 193 EHSLALSNDGKVWAWGRNEFGQLGNGETEKSNI-PRLVKNLENI--EMIAGGDNHSLALD 249

Query: 233 IRGHVHTCGSNTHGQLGHG-------DTLDRPTPKSIAPLEE---VGSVVQIAAGPSYML 282
             G +   G N++GQ+G G       D   R       P++     G V Q++AG  +  
Sbjct: 250 HDGAIWAWGYNSNGQIGDGSSNVYEKDGQLREKRNKTEPVKLNGLYGKVKQVSAGIKHST 309

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           A+T NG VY++G      LG+G   D   P      R     ++ +  G  H  A+D SG
Sbjct: 310 ALTENGEVYAWGWNEYGQLGNGSMKDSKVPLRNNVGRS----IIDIETGSYHSFAVDESG 365

Query: 343 YV 344
            +
Sbjct: 366 VI 367



 Score = 72.4 bits (176), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 76/284 (26%), Positives = 121/284 (42%), Gaps = 39/284 (13%)

Query: 41  TFGGSHGLYPQKFRSLVDLAASQLCALHSIYAGMS-------RNVQIELLNRCNGNWKRV 93
           T GG +   P +   L D+       +HS+    S        N+  +L N  N    + 
Sbjct: 117 TEGGKNIARPVQINGLKDIVQVSTGLVHSLALDQSGAVWSWGENIYGQLGNGTN----QD 172

Query: 94  LRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCV 152
                 VE  S+IV        I  G  H+L +SN   V++ G +  G LG+G   T+  
Sbjct: 173 SSIPTKVEFLSNIV-------AIEAGAEHSLALSNDGKVWAWGRNEFGQLGNGE--TEKS 223

Query: 153 SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN----------- 201
           +  R+   +  ++  ++  +NH+  +   G ++  G NS+   G   +N           
Sbjct: 224 NIPRL-VKNLENIEMIAGGDNHSLALDHDGAIWAWGYNSNGQIGDGSSNVYEKDGQLREK 282

Query: 202 RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 261
           R    P  +  L G   KQV+AG+  +  LT  G V+  G N +GQLG+G   D   P  
Sbjct: 283 RNKTEPVKLNGLYG-KVKQVSAGIKHSTALTENGEVYAWGWNEYGQLGNGSMKDSKVPLR 341

Query: 262 IAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG 304
                 VG S++ I  G  +  AV  +GV+Y++G  +   LG G
Sbjct: 342 ----NNVGRSIIDIETGSYHSFAVDESGVIYAWGDATYGQLGDG 381


>gi|147900291|ref|NP_001086738.1| HECT and RLD domain containing E3 ubiquitin protein ligase 4
           [Xenopus laevis]
 gi|83405253|gb|AAI10973.1| MGC81587 protein [Xenopus laevis]
          Length = 897

 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 106/231 (45%), Gaps = 5/231 (2%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           ++ G  HTL +++   VFS G +  G +G             I   S   +VQV+   +H
Sbjct: 89  VSCGEAHTLALNDKGQVFSWGHAAHGQIGVSIAEDYIRVPRNIKSLSDIQIVQVACGHHH 148

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           +  + +   +++ G N     G     R    PR +++L G+P   + AG   +  LTI 
Sbjct: 149 SLALSKESNIYSWGQNQYGQLGLGSEKRKESAPRHIKSLSGIPFAHIAAGGGHSFALTIS 208

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G +   G N  GQLG  D  DR  P  +  L     ++ I  G  +  A+T  G V++FG
Sbjct: 209 GAIFGWGRNKFGQLGLNDETDRSDPALLKSLRS-QKIIYICCGEDHTAALTKEGGVFTFG 267

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYV 344
           +G    LGH     E+ PR +  F   G  V +++ G +H +A + SSG +
Sbjct: 268 AGGYGQLGHNSASHEVNPRKV--FELMGNIVTQIACGRQHTLAFVPSSGRI 316



 Score = 74.7 bits (182), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 101/207 (48%), Gaps = 8/207 (3%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G +H+L +S  S+++S G +  G LG G E  +  +   I   S      ++A  
Sbjct: 140 VQVACGHHHSLALSKESNIYSWGQNQYGQLGLGSEKRKESAPRHIKSLSGIPFAHIAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
            H+  +  SG +F  G N     G  D T+R    P L+++L+      +  G + T  L
Sbjct: 200 GHSFALTISGAIFGWGRNKFGQLGLNDETDRS--DPALLKSLRSQKIIYICCGEDHTAAL 257

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGV 289
           T  G V T G+  +GQLGH        P+ +   E +G++V QIA G  + LA V  +G 
Sbjct: 258 TKEGGVFTFGAGGYGQLGHNSASHEVNPRKV--FELMGNIVTQIACGRQHTLAFVPSSGR 315

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQ 316
           +YSFG G N  LG G   ++  P  ++
Sbjct: 316 IYSFGLGGNGQLGIGSTSNKKSPSMVK 342



 Score = 74.3 bits (181), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 67/213 (31%), Positives = 97/213 (45%), Gaps = 9/213 (4%)

Query: 135 GSSLCGVLGHGPETTQCV-SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V    R +F    +V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEVVIEPRRCDFFINKNVRDVGCGNRHTGFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 253
             GH  + +   +P  V AL       V+ G   T  L  +G V + G   HGQ+G    
Sbjct: 65  QLGHDKSRK---KPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAAHGQIGVSIA 121

Query: 254 LDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
            D    P++I  L ++  +VQ+A G  + LA++    +YS+G      LG G E+  E  
Sbjct: 122 EDYIRVPRNIKSLSDI-QIVQVACGHHHSLALSKESNIYSWGQNQYGQLGLGSEKRKESA 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           PR I++    GI    ++AG  H  AL  SG +
Sbjct: 181 PRHIKSL--SGIPFAHIAAGGGHSFALTISGAI 211


>gi|196012955|ref|XP_002116339.1| hypothetical protein TRIADDRAFT_64264 [Trichoplax adhaerens]
 gi|190580930|gb|EDV21009.1| hypothetical protein TRIADDRAFT_64264 [Trichoplax adhaerens]
          Length = 514

 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 72/232 (31%), Positives = 115/232 (49%), Gaps = 12/232 (5%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           GR+   L +   V+S G    G LGHG  T   +  T I+   +  V +++    H+  V
Sbjct: 220 GRHAMALTAEGKVYSWGCGDRGQLGHG-NTLGYLDPTLIDELKSKEVTKIACGAMHSIAV 278

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           L  G++F+ GD S+   GH + N     P+ + +L G     V  G  +T  + + G  V
Sbjct: 279 LSDGKIFSWGDGSNGALGHGN-NLAQLLPKKIMSLNGKHIMAVACGECYT--IAVAGDDV 335

Query: 238 HTCGSNTHGQLGHGDTLDRPT---PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
            + G   +G+LG+G  ++ P+   P  I  L   G +  +A G +   AV+ NG V+++G
Sbjct: 336 WSWGLGGNGELGYG--VEMPSYYMPTKIEALFFKG-ITNVACGYATSFAVSANGKVWAWG 392

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSL 346
           SG  F LG G +   ++PR IQ    KG  + RV A   H +A+D +G V +
Sbjct: 393 SGDRFRLGLGNEKVIVKPREIQG-DLKGKKIKRVVASLFHALAIDENGQVYI 443



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 54/164 (32%), Positives = 82/164 (50%), Gaps = 8/164 (4%)

Query: 178 VLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           V ++G +F CG     C G     D N P   P+L+  +  V    +  G      LT  
Sbjct: 172 VSRNGGIFACGKGHMGCLGLGNCDDVNVPRQIPQLLPVM--VTTVAIHPGGRHAMALTAE 229

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G V++ G    GQLGHG+TL    P  I  L+    V +IA G  + +AV  +G ++S+G
Sbjct: 230 GKVYSWGCGDRGQLGHGNTLGYLDPTLIDELKS-KEVTKIACGAMHSIAVLSDGKIFSWG 288

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            GSN  LGHG    +L P+ I +    G H++ V+ G+ + +A+
Sbjct: 289 DGSNGALGHGNNLAQLLPKKIMSLN--GKHIMAVACGECYTIAV 330



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 49/200 (24%), Positives = 87/200 (43%), Gaps = 7/200 (3%)

Query: 115 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           +I  G  H++ ++S+  +FS G    G LGHG    Q +   +I   +  H++ V+  E 
Sbjct: 267 KIACGAMHSIAVLSDGKIFSWGDGSNGALGHGNNLAQLLP-KKIMSLNGKHIMAVACGEC 325

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL--KGVPCKQVTAGLNFTGFL 231
           +    +    V++ G   +   G+       + P  +EAL  KG+    V  G   +  +
Sbjct: 326 YT-IAVAGDDVWSWGLGGNGELGYGVEMPSYYMPTKIEALFFKGI--TNVACGYATSFAV 382

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           +  G V   GS    +LG G+      P+ I    +   + ++ A   + LA+  NG VY
Sbjct: 383 SANGKVWAWGSGDRFRLGLGNEKVIVKPREIQGDLKGKKIKRVVASLFHALAIDENGQVY 442

Query: 292 SFGSGSNFCLGHGEQHDELQ 311
            +GS     +G+ E   + Q
Sbjct: 443 IWGSQEIGPVGNDEDAKQQQ 462



 Score = 43.9 bits (102), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 36/140 (25%), Positives = 60/140 (42%), Gaps = 2/140 (1%)

Query: 114 MQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           M +  G  +T+ ++   V+S G    G LG+G E       T+I       +  V+    
Sbjct: 318 MAVACGECYTIAVAGDDVWSWGLGGNGELGYGVEMPSYYMPTKIEALFFKGITNVACGYA 377

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGFLT 232
            +  V  +G+V+  G    F  G     + I +PR ++  LKG   K+V A L     + 
Sbjct: 378 TSFAVSANGKVWAWGSGDRFRLG-LGNEKVIVKPREIQGDLKGKKIKRVVASLFHALAID 436

Query: 233 IRGHVHTCGSNTHGQLGHGD 252
             G V+  GS   G +G+ +
Sbjct: 437 ENGQVYIWGSQEIGPVGNDE 456


>gi|89273844|emb|CAJ81935.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Xenopus (Silurana) tropicalis]
          Length = 526

 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 66/219 (30%), Positives = 101/219 (46%), Gaps = 4/219 (1%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQ 183
           L  N  VF  G++  G LG G +    +   RI+  S   +V +S  S  H   V   G+
Sbjct: 36  LTKNDEVFVMGTNSSGCLGTG-DAQSIIEPRRIDMLSGKRIVSLSYGSGPHVVIVTSDGE 94

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           V++ G N+    G+  TN+ +   ++   L       V  G + +  LT  G V+  G N
Sbjct: 95  VYSWGHNAYSQLGNGSTNQALSPCQVSTNLINKKAISVACGSHHSMVLTCDGEVYAWGYN 154

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 303
             GQ+G G T ++P P+ +    +  +V+ IA G    +AV  NG VY++G   N  LG 
Sbjct: 155 NSGQVGSGSTANQPIPRKVTSCLQNKTVIGIACGQMSSMAVVDNGEVYAWGYNGNGQLGL 214

Query: 304 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           G   +  QP   +    +GI V +V  G  H +AL   G
Sbjct: 215 GSSGN--QPTPCRIAALQGIRVEQVVCGYAHTLALTDEG 251



 Score = 54.3 bits (129), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 50/202 (24%), Positives = 101/202 (50%), Gaps = 10/202 (4%)

Query: 97  LQSVEHSSDIVETSAGNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFT 155
           L   + S++++   A  + +  G +H+++++ +  V++ G +  G +G G    Q +   
Sbjct: 115 LSPCQVSTNLINKKA--ISVACGSHHSMVLTCDGEVYAWGYNNSGQVGSGSTANQPIPRK 172

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALK 214
             +      V+ ++  +  +  V+ +G+V+  G N +   G   + N+P   P  + AL+
Sbjct: 173 VTSCLQNKTVIGIACGQMSSMAVVDNGEVYAWGYNGNGQLGLGSSGNQPT--PCRIAALQ 230

Query: 215 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 274
           G+  +QV  G   T  LT  G ++  G+N++GQLG G+  ++  P  +   +E   +V+I
Sbjct: 231 GIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQLGTGNKSNQSYPVQVIVDKE--RIVEI 288

Query: 275 AAGPS--YMLAVTGNGVVYSFG 294
           AA  S     A + +G VY +G
Sbjct: 289 AACHSSHTSAAKSQSGQVYMWG 310



 Score = 46.2 bits (108), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 64/145 (44%), Gaps = 7/145 (4%)

Query: 203 PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           PIF     E LK +    V    N   +LT    V   G+N+ G LG GD      P+ I
Sbjct: 8   PIFALCPQEDLKFIQQACVFGAGNEVLYLTKNDEVFVMGTNSSGCLGTGDAQSIIEPRRI 67

Query: 263 APLEEVGSV-VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQT--FR 319
             L     V +   +GP +++ VT +G VYS+G  +   LG+G  +  L P  + T    
Sbjct: 68  DMLSGKRIVSLSYGSGP-HVVIVTSDGEVYSWGHNAYSQLGNGSTNQALSPCQVSTNLIN 126

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYV 344
           +K I    V+ G  H + L   G V
Sbjct: 127 KKAI---SVACGSHHSMVLTCDGEV 148


>gi|395527072|ref|XP_003765675.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Sarcophilus
            harrisii]
          Length = 4483

 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 74/251 (29%), Positives = 118/251 (47%), Gaps = 12/251 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 3784 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 3837

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV ++A   H+A +  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 3838 VIESLRGIEVVDIAAGGAHSACITAAGDLYTWGKGRYGRLGHGDSEDQL-KPKLVEALQG 3896

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 3897 YRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 3955

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 3956 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4013

Query: 334  HVVALDSSGYV 344
            H V     G V
Sbjct: 4014 HCVCCTEDGEV 4024



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/228 (30%), Positives = 106/228 (46%), Gaps = 7/228 (3%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+   L  +  +FS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 2808 GRHAMALTVDGKIFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAI 2866

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 2867 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 2925

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 2926 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 2984

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G V
Sbjct: 2985 DYFRLGHGTDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDTGQV 3030



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 67/224 (29%), Positives = 107/224 (47%), Gaps = 18/224 (8%)

Query: 130  SVFSCGSSLCGVLGHG------PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 183
             V++CG +  G LG G      P   Q  + +  N+      V V +   HA  +   G+
Sbjct: 2764 KVYACGEATNGRLGLGISSGTVPIPRQITALS--NY--VVKKVAVHSGGRHAMALTVDGK 2819

Query: 184  VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            +F+ G+      GH  +     +PRL+EALK    + +  G + +  +T  G ++T G  
Sbjct: 2820 IFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLG 2878

Query: 244  THGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFC 300
             +G+LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    
Sbjct: 2879 EYGRLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGK 2936

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            LG G       P+ I+  R  G  V ++  G +  +AL  SG V
Sbjct: 2937 LGRGGSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVV 2978



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/190 (30%), Positives = 91/190 (47%), Gaps = 11/190 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2742 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSNYVV 2799

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G + + G    G+LGH   ++   P+ I  L +   +  IA 
Sbjct: 2800 KKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEAL-KTKRIRDIAC 2858

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 2859 GSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 2916

Query: 335  VVALDSSGYV 344
             +AL   G V
Sbjct: 2917 TLALTDEGLV 2926



 Score = 67.8 bits (164), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  I++S  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 2856 IACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 2914

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 2915 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 2973

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 2974 KSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDTGQVYA 3032

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3033 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3075



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 78/162 (48%), Gaps = 5/162 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2712 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 2770

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  + +A+T +G ++S+G G +  
Sbjct: 2771 ATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGK 2830

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            LGH  + +  +PR I+  + K I    ++ G  H  A+ SSG
Sbjct: 2831 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAAITSSG 2870



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 49/87 (56%), Gaps = 1/87 (1%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
           F  I G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +G 
Sbjct: 404 FSLIFGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSVALTKDGQ 462

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQ 316
           VYS+G G N  LGHG +     P+ ++
Sbjct: 463 VYSWGKGDNQRLGHGTEEHVRYPKLLE 489



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 3906 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 3964

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 3965 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4023

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    + ++A G ++ LA
Sbjct: 4024 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKINRVACGSAHTLA 4069



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122  HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             TL +++   VFS G    G LG G  +  C     I   +   V Q+      +  + +
Sbjct: 2916 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 2974

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            SG V+T G    F  GH  T+  + +P++VE L+G     V  G      +T  G V+  
Sbjct: 2975 SGVVWTWGKGDYFRLGH-GTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAW 3033

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 3034 GDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 3077



 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 67/137 (48%), Gaps = 3/137 (2%)

Query: 207  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            P   EAL  +   Q+  G      +T  G ++  G    G+LG G T    TP  +  ++
Sbjct: 3730 PTPCEALAALRPIQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQ 3789

Query: 267  EVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
             V    V + +G  + LA++  G VYS+G   +  LGHG +    +PR I++ R  GI V
Sbjct: 3790 HVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLR--GIEV 3847

Query: 326  VRVSAGDEHVVALDSSG 342
            V ++AG  H   + ++G
Sbjct: 3848 VDIAAGGAHSACITAAG 3864



 Score = 40.0 bits (92), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 1/77 (1%)

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           A F L  GQV++ GD      G R  +     P+L+E L+ +   +V  G  F+  LT  
Sbjct: 402 AVFSLIFGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKD 460

Query: 235 GHVHTCGSNTHGQLGHG 251
           G V++ G   + +LGHG
Sbjct: 461 GQVYSWGKGDNQRLGHG 477


>gi|296196030|ref|XP_002745681.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Callithrix
           jacchus]
          Length = 1006

 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 75/243 (30%), Positives = 111/243 (45%), Gaps = 23/243 (9%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 165
           +Q  +G  H LL+ +NSSV SCG +  G LG         PE  Q +   + N       
Sbjct: 26  LQAASGERHALLLLTNSSVHSCGENSRGQLGRRGAPRGDLPEPVQALKTLKFNL------ 79

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
             VS  + H+  V   G+VF  G  S    G  +     F P+ +  L G+   QV+ G 
Sbjct: 80  --VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEINFTPKKITTLTGIKIIQVSCGH 137

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             +  L+    V + G N+HGQLG G  L  + +P+ +  LE +  V Q+AAG ++  A+
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLGKELSSQASPQRVRSLEGI-PVAQVAAGGAHSFAL 196

Query: 285 TGNGVVYSFGSGSNFCL---GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           +  G  + +GS S   L   G   Q    +P +I   +  G  V+ +S GDEH   L   
Sbjct: 197 SLCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLG--VIYISCGDEHTAVLSQD 254

Query: 342 GYV 344
           G V
Sbjct: 255 GKV 257



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/182 (30%), Positives = 96/182 (52%), Gaps = 6/182 (3%)

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           A ++Q ++ E HA  +L +  V +CG+NS    G R   R    P  V+ALK +    V+
Sbjct: 23  AELLQAASGERHALLLLTNSSVHSCGENSRGQLGRRGAPRGDL-PEPVQALKTLKFNLVS 81

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYM 281
            G   +  +  +G V   G+ + GQLG G+  +   TPK I  L  +  ++Q++ G  + 
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEINFTPKKITTLTGI-KIIQVSCGHYHS 140

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           LA++ +  V+S+G  S+  LG G++   +  P+ +++   +GI V +V+AG  H  AL  
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKELSSQASPQRVRSL--EGIPVAQVAAGGAHSFALSL 198

Query: 341 SG 342
            G
Sbjct: 199 CG 200



 Score = 72.0 bits (175), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 62/226 (27%), Positives = 109/226 (48%), Gaps = 8/226 (3%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           ++ G+ H+L + +   VF+ G+   G LG G       +  +I   +   ++QVS    H
Sbjct: 80  VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEINFTPKKITTLTGIKIIQVSCGHYH 139

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           +  + +  QVF+ G NS    G          P+ V +L+G+P  QV AG   +  L++ 
Sbjct: 140 SLALSKDSQVFSWGKNSHGQLGLGKELSSQASPQRVRSLEGIPVAQVAAGGAHSFALSLC 199

Query: 235 GHVHTCGSNTHGQL---GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           G     GSN+ GQL   G    +    P SI  L+ +G V+ I+ G  +   ++ +G V+
Sbjct: 200 GTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLG-VIYISCGDEHTAVLSQDGKVF 258

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           +FG  S+  LG+     +  P+ ++  R  G+ V ++  G +H +A
Sbjct: 259 TFGDNSSGQLGYNPTPKKRGPQIVE--RIDGL-VSQIDCGGDHTIA 301



 Score = 70.9 bits (172), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 64/190 (33%), Positives = 90/190 (47%), Gaps = 12/190 (6%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++ G YH+L +S +S VFS G +  G LG G E +   S  R+       V QV+A  
Sbjct: 131 IQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKELSSQASPQRVRSLEGIPVAQVAAGG 190

Query: 173 NHAAFVLQSGQVFTCGDNSS--FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            H+  +   G  F  G NS+       R+      +P  + ALK +    ++ G   T  
Sbjct: 191 AHSFALSLCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLGVIYISCGDEHTAV 250

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP--LEEV-GSVVQIAAGPSYMLA-VTG 286
           L+  G V T G N+ GQLG+      PTPK   P  +E + G V QI  G  + +A V  
Sbjct: 251 LSQDGKVFTFGDNSSGQLGYN-----PTPKKRGPQIVERIDGLVSQIDCGGDHTIAYVHT 305

Query: 287 NGVVYSFGSG 296
            G V SFG G
Sbjct: 306 TGQVVSFGHG 315



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 63/138 (45%), Gaps = 4/138 (2%)

Query: 208 RLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE 267
           R  E   G    Q  +G      L     VH+CG N+ GQLG         P+ +  L+ 
Sbjct: 15  RRTEGSPGAELLQAASGERHALLLLTNSSVHSCGENSRGQLGRRGAPRGDLPEPVQALKT 74

Query: 268 VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGIHVV 326
           +   + ++ G  + LAV   G V+++G+GS   LG GE +     P+ I T    GI ++
Sbjct: 75  LKFNL-VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEINFTPKKITTL--TGIKII 131

Query: 327 RVSAGDEHVVALDSSGYV 344
           +VS G  H +AL     V
Sbjct: 132 QVSCGHYHSLALSKDSQV 149



 Score = 42.4 bits (98), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 72/157 (45%), Gaps = 15/157 (9%)

Query: 115 QITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH--VVQVSAS 171
           Q+  G  H+  +S   + F  GS+  G L       Q  S   ++  +  +  V+ +S  
Sbjct: 185 QVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLGVIYISCG 244

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGF 230
           + H A + Q G+VFT GDNSS   G+  T  P  R P++VE + G+   Q+  G    G 
Sbjct: 245 DEHTAVLSQDGKVFTFGDNSSGQLGYNPT--PKKRGPQIVERIDGL-VSQIDCG----GD 297

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE 267
            TI  +VHT G       GHG + D   P     L+E
Sbjct: 298 HTI-AYVHTTGQVV--SFGHGPS-DTSKPTHPEALKE 330


>gi|270001314|gb|EEZ97761.1| hect domain and RLD 2-like protein [Tribolium castaneum]
          Length = 3894

 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 70/235 (29%), Positives = 109/235 (46%), Gaps = 21/235 (8%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSAS 171
            G++   L  +  VFS G    G LGHG       P+  + +   +I          ++  
Sbjct: 2151 GKHAMALTLDGKVFSWGEGEDGKLGHGNRLNLDKPKMIEALRSKKIR--------DIACG 2202

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TG 229
             +H+A +  SG+++T G       GH D N    +P+L+++L G    QV  G     T 
Sbjct: 2203 SSHSAAITSSGELYTWGLGEYGRLGHGD-NITQLKPKLIKSLVGHRIVQVACGSRDAQTL 2261

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             LT  G V + G    G+LG G +     P +I  L  +  VVQI  G  + LA+T  G 
Sbjct: 2262 ALTDEGWVFSWGDGDFGKLGRGGSEGCNIPHNIERLNAL-EVVQIECGAQFSLALTKTGE 2320

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            V+++G G  F LGHG      +P  I++ + K   V+ V+ G  H +A+  +G V
Sbjct: 2321 VWTWGKGDYFRLGHGSDQHVRKPTVIESLKDK--KVIHVAVGALHCLAVTDTGQV 2373



 Score = 84.7 bits (208), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 67/252 (26%), Positives = 115/252 (45%), Gaps = 14/252 (5%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSF 154
             L+S++H           + + +G  H L +S ++ V+S G    G LGHG     C + 
Sbjct: 3109 LLESIQH------VFIKKIAVNSGGKHCLALSADNDVYSWGEGDDGKLGHGNRLA-CETP 3161

Query: 155  TRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK 214
              I       ++ ++    H+A +  +GQ++T G       GH D+   + +P+L+E L 
Sbjct: 3162 KLIEALQGYEIIDIACGGAHSAAITSTGQLYTWGKGRYGRLGHGDSEDQL-KPKLIEELV 3220

Query: 215  GVPCKQVTAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
            G     V  G      L I    +V + G   +G+LG G +     PK I  L  +G V+
Sbjct: 3221 GYKVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKVPKKIESLAGLG-VI 3279

Query: 273  QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
            ++  G  + +A+T +G VY++G G    LGHG      +P+ +     +G  ++ ++ G 
Sbjct: 3280 KVECGSQFSVALTRSGSVYTWGKGDYHRLGHGTGEHVRRPKKVAAL--QGKKIISIATGS 3337

Query: 333  EHVVALDSSGYV 344
             H VA    G V
Sbjct: 3338 LHCVACSDEGEV 3349



 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 68/222 (30%), Positives = 110/222 (49%), Gaps = 15/222 (6%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASE--NHAAFVLQSGQVFT 186
             +++CG    G LG G   +  V + R I F S   + +V+      HA  +   G+VF+
Sbjct: 2108 KLYACGEGTNGRLGLG--HSNNVPYPRPIPFLSQYVIKKVAVHSGGKHAMALTLDGKVFS 2165

Query: 187  CGDNSSFCCGHRDTNR-PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH 245
             G+      GH   NR  + +P+++EAL+    + +  G + +  +T  G ++T G   +
Sbjct: 2166 WGEGEDGKLGH--GNRLNLDKPKMIEALRSKKIRDIACGSSHSAAITSSGELYTWGLGEY 2223

Query: 246  GQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLG 302
            G+LGHGD + +  PK I  L  VG  +VQ+A G   +  LA+T  G V+S+G G    LG
Sbjct: 2224 GRLGHGDNITQLKPKLIKSL--VGHRIVQVACGSRDAQTLALTDEGWVFSWGDGDFGKLG 2281

Query: 303  HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             G       P  I+  R   + VV++  G +  +AL  +G V
Sbjct: 2282 RGGSEGCNIPHNIE--RLNALEVVQIECGAQFSLALTKTGEV 2321



 Score = 67.8 bits (164), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 98/225 (43%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  I++S  +++ G    G LGHG   TQ +    I       +VQV+     
Sbjct: 2199 IACGSSHSAAITSSGELYTWGLGEYGRLGHGDNITQ-LKPKLIKSLVGHRIVQVACGSRD 2257

Query: 175  AAFV--LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A  +     G VF+ GD      G R  +     P  +E L  +   Q+  G  F+  LT
Sbjct: 2258 AQTLALTDEGWVFSWGDGDFGKLG-RGGSEGCNIPHNIERLNALEVVQIECGAQFSLALT 2316

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG       P  I  L++   V+ +A G  + LAVT  G VY+
Sbjct: 2317 KTGEVWTWGKGDYFRLGHGSDQHVRKPTVIESLKD-KKVIHVAVGALHCLAVTDTGQVYA 2375

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +     + +H+ RV+ G  H +A
Sbjct: 2376 WGDNDHGQQGNGTTIVNRKPALVHGL--EDVHINRVACGSSHSIA 2418



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/161 (29%), Positives = 76/161 (47%), Gaps = 3/161 (1%)

Query: 125  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
            L     VFS G    G LG G  +  C     I   +A  VVQ+      +  + ++G+V
Sbjct: 2263 LTDEGWVFSWGDGDFGKLGRGG-SEGCNIPHNIERLNALEVVQIECGAQFSLALTKTGEV 2321

Query: 185  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
            +T G    F  GH  +++ + +P ++E+LK      V  G      +T  G V+  G N 
Sbjct: 2322 WTWGKGDYFRLGH-GSDQHVRKPTVIESLKDKKVIHVAVGALHCLAVTDTGQVYAWGDND 2380

Query: 245  HGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            HGQ G+G T+    P  +  LE+V  + ++A G S+ +A T
Sbjct: 2381 HGQQGNGTTIVNRKPALVHGLEDV-HINRVACGSSHSIAWT 2420



 Score = 40.0 bits (92), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 64/137 (46%), Gaps = 3/137 (2%)

Query: 207  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            P   EAL  +   Q+  G      +T  G V+  G    G+LG G T     P  +  ++
Sbjct: 3055 PTPCEALSTLRPVQLVGGEQTLFAVTADGKVYATGYGAGGRLGIGGTDSVLVPTLLESIQ 3114

Query: 267  EVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
             V    + + +G  + LA++ +  VYS+G G +  LGHG +     P+ I+    +G  +
Sbjct: 3115 HVFIKKIAVNSGGKHCLALSADNDVYSWGEGDDGKLGHGNRLACETPKLIEAL--QGYEI 3172

Query: 326  VRVSAGDEHVVALDSSG 342
            + ++ G  H  A+ S+G
Sbjct: 3173 IDIACGGAHSAAITSTG 3189



 Score = 39.7 bits (91), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 7/113 (6%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP ++++ L  V    Q+  G   + AVT +G VY
Sbjct: 3031 GTIYGWGHNHRGQLGGIEGAKVKIPTPCEALSTLRPV----QLVGGEQTLFAVTADGKVY 3086

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            + G G+   LG G     L P  +++ +   I  + V++G +H +AL +   V
Sbjct: 3087 ATGYGAGGRLGIGGTDSVLVPTLLESIQHVFIKKIAVNSGGKHCLALSADNDV 3139


>gi|312381821|gb|EFR27472.1| hypothetical protein AND_05798 [Anopheles darlingi]
          Length = 5197

 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 74/235 (31%), Positives = 107/235 (45%), Gaps = 21/235 (8%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSAS 171
            G++   L  +  VFS G    G LGHG       P+  + +   RI          ++  
Sbjct: 3337 GKHAMALTLDGKVFSWGEGEDGKLGHGNRLTLEKPKLIETLRTKRIR--------DIACG 3388

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TG 229
             +H+A +  SG+++T G       GH D N    +P+LV AL      QV  G     T 
Sbjct: 3389 SSHSAAITSSGELYTWGLGEYGRLGHGD-NCTQLKPKLVTALADHRVVQVACGSRDAQTL 3447

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             LT  G V + G    G+LG G +     P  +  L  VG V+QI  G  + LA+T +G 
Sbjct: 3448 CLTEEGLVFSWGDGDFGKLGRGGSEGCSIPHQVERLNGVG-VMQIECGAQFSLALTKSGE 3506

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            V+++G G  + LGHG      +P  IQ  R  G  V+ V+ G  H +A+  SG V
Sbjct: 3507 VWTWGKGDYYRLGHGTDQHVRKPTPIQGLR--GKKVIHVAVGALHCLAVTDSGQV 3559



 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 57/181 (31%), Positives = 90/181 (49%), Gaps = 6/181 (3%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAG 224
            V V++   H   +   G+VF+ G+      GH   NR  + RP+L+EAL G+    +  G
Sbjct: 4467 VAVNSGGKHCLALSSDGEVFSWGEGEDGKLGH--GNRDSYDRPKLIEALSGIGVIDIACG 4524

Query: 225  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLA 283
               +  +T +GHV T G   +G+LGHGD+ D+  PK +  L    ++ +   +G +  L 
Sbjct: 4525 SAHSACITSQGHVLTWGKGRYGRLGHGDSEDQLQPKLVEALLGYRAIDIACGSGDAQTLC 4584

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I++    G+ V +V  G +  VAL  SG 
Sbjct: 4585 ITDDDNVWSWGDGDYGKLGRGGSDGCKVPMKIESL--AGLGVTKVECGSQFSVALTRSGS 4642

Query: 344  V 344
            V
Sbjct: 4643 V 4643



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/235 (29%), Positives = 105/235 (44%), Gaps = 14/235 (5%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSAS 171
            + +G  H L L S+  VFS G    G LGHG       S+ R   I   S   V+ ++  
Sbjct: 4469 VNSGGKHCLALSSDGEVFSWGEGEDGKLGHGNRD----SYDRPKLIEALSGIGVIDIACG 4524

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
              H+A +   G V T G       GH D+   + +P+LVEAL G     +  G      L
Sbjct: 4525 SAHSACITSQGHVLTWGKGRYGRLGHGDSEDQL-QPKLVEALLGYRAIDIACGSGDAQTL 4583

Query: 232  TI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             I    +V + G   +G+LG G +     P  I  L  +G V ++  G  + +A+T +G 
Sbjct: 4584 CITDDDNVWSWGDGDYGKLGRGGSDGCKVPMKIESLAGLG-VTKVECGSQFSVALTRSGS 4642

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            VY++G G    LGHG      +P+ +     +G  ++ ++ G  H VA    G V
Sbjct: 4643 VYTWGKGDYHRLGHGNTDHVRRPKKVAAL--QGKKIISIATGSLHCVACSDGGEV 4695



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 63/206 (30%), Positives = 96/206 (46%), Gaps = 14/206 (6%)

Query: 142 LGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN 201
             HG  +T   S   I  P+   V QV+ SE     +  +GQV +   ++   C   DT 
Sbjct: 563 FAHG--STSRYSTATIELPAGVQVRQVACSETSIYILTTTGQVLSLQHSN---CHTPDTT 617

Query: 202 RPIFRPRLVEALKGVPCKQVTA---GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT 258
            P    + +E L+ V   Q+ A   G +    LT  G V + G+   G+LGHGDT  +  
Sbjct: 618 AP----KPIEGLESVNIVQLAAHCEGRHVLA-LTATGDVFSWGNGEGGRLGHGDTSSKDI 672

Query: 259 PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 318
           P  I  L E   V  +  G SY  A+T  G +Y++G G+   LGHG   D+  P  +Q  
Sbjct: 673 PTRIVALAER-QVTGVFCGSSYSAAITAAGELYTWGRGTYGRLGHGNSEDKHLPTIVQVL 731

Query: 319 RRKGIHVVRVSAGDEHVVALDSSGYV 344
           +++ +  V +  GD H + +  +G V
Sbjct: 732 KQQRVIHVALGCGDAHSLCVTDTGIV 757



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 66/240 (27%), Positives = 111/240 (46%), Gaps = 18/240 (7%)

Query: 114  MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHG-----PETTQCVSFTRINFPSAAHVVQ 167
            + I  G     ++S +  +++CG    G LG G     P   Q    ++         V 
Sbjct: 3277 IHIAGGSKSLFIVSQDGKLYACGEGTNGRLGLGHNNNVPTPKQVPILSQY----VVKKVA 3332

Query: 168  VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR-PIFRPRLVEALKGVPCKQVTAGLN 226
            V +   HA  +   G+VF+ G+      GH   NR  + +P+L+E L+    + +  G +
Sbjct: 3333 VHSGGKHAMALTLDGKVFSWGEGEDGKLGH--GNRLTLEKPKLIETLRTKRIRDIACGSS 3390

Query: 227  FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG--PSYMLAV 284
             +  +T  G ++T G   +G+LGHGD   +  PK +  L +   VVQ+A G   +  L +
Sbjct: 3391 HSAAITSSGELYTWGLGEYGRLGHGDNCTQLKPKLVTALAD-HRVVQVACGSRDAQTLCL 3449

Query: 285  TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            T  G+V+S+G G    LG G       P  ++  R  G+ V+++  G +  +AL  SG V
Sbjct: 3450 TEEGLVFSWGDGDFGKLGRGGSEGCSIPHQVE--RLNGVGVMQIECGAQFSLALTKSGEV 3507



 Score = 68.9 bits (167), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 70/225 (31%), Positives = 98/225 (43%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  I++S  +++ G    G LGHG   TQ +    +   +   VVQV+     
Sbjct: 3385 IACGSSHSAAITSSGELYTWGLGEYGRLGHGDNCTQ-LKPKLVTALADHRVVQVACGSRD 3443

Query: 175  AAFV--LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A  +   + G VF+ GD      G R  +     P  VE L GV   Q+  G  F+  LT
Sbjct: 3444 AQTLCLTEEGLVFSWGDGDFGKLG-RGGSEGCSIPHQVERLNGVGVMQIECGAQFSLALT 3502

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG       P  I  L     V+ +A G  + LAVT +G VY+
Sbjct: 3503 KSGEVWTWGKGDYYRLGHGTDQHVRKPTPIQGLRG-KKVIHVAVGALHCLAVTDSGQVYA 3561

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G G      +P  +      GI V RV+ G  H VA
Sbjct: 3562 WGDNDHGQQGSGNTIVNKKPSLVLGL--DGIFVNRVACGSSHSVA 3604



 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 65/226 (28%), Positives = 107/226 (47%), Gaps = 6/226 (2%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           GR+   L +   VFS G+   G LGHG  +++ +  TRI   +   V  V    +++A +
Sbjct: 639 GRHVLALTATGDVFSWGNGEGGRLGHGDTSSKDIP-TRIVALAERQVTGVFCGSSYSAAI 697

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL--TIRGH 236
             +G+++T G  +    GH ++      P +V+ LK      V  G      L  T  G 
Sbjct: 698 TAAGELYTWGRGTYGRLGHGNSEDKHL-PTIVQVLKQQRVIHVALGCGDAHSLCVTDTGI 756

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           V+  G    G+LG+G       P +I   +     V++ +G  + +A+  +G VYS+G G
Sbjct: 757 VYAWGDGDFGKLGNGTCNGSSVPVAIELPQCSDGAVKVFSGSHFSVALGRDGTVYSWGKG 816

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
               LGHG       P+AIQ    +G ++V ++ G  H +AL +SG
Sbjct: 817 HGGRLGHGHSEHTASPKAIQAL--EGKNIVDLAVGLAHCLALTASG 860



 Score = 40.4 bits (93), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 55/107 (51%), Gaps = 7/107 (6%)

Query: 241  GSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            G N  GQLG   G  +  PTP ++++ L  +    QIA G   + AVT +G +Y+ G G+
Sbjct: 4383 GHNHRGQLGGLDGSRIKMPTPCEALSLLRPI----QIAGGEQTLYAVTPDGKLYATGYGA 4438

Query: 298  NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
               LG G       P  +++ +   I  V V++G +H +AL S G V
Sbjct: 4439 GGRLGIGGTDSVTTPTLVESLQHVMIKKVAVNSGGKHCLALSSDGEV 4485


>gi|21741206|emb|CAD41017.1| OSJNBb0086G13.15 [Oryza sativa Japonica Group]
          Length = 256

 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 105/207 (50%), Gaps = 5/207 (2%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ--VSASE 172
           ++ G  H++ L++ + + S G    G LGHG    + V      F +AA  +   +  ++
Sbjct: 27  VSAGASHSVALLAGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAAAPGITSVICGAD 86

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           +  A+     QV++ G       GH +++  +F P+ V+AL+G+  KQ+  G +    +T
Sbjct: 87  HTTAYSEDEQQVYSWGWGDFGRLGHGNSSD-VFTPQPVKALQGIKIKQIACGDSHCLAVT 145

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
           + G V + G N +GQLG G T D   P+ I   E V  V  IAAG  +  AVT +G +Y 
Sbjct: 146 MAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQSFEGV-CVKMIAAGAEHTAAVTEDGDLYG 204

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFR 319
           +G G    LG G+++D L P  + +  
Sbjct: 205 WGWGRYGNLGLGDRNDRLVPEKVSSVE 231



 Score = 72.0 bits (175), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 62/191 (32%), Positives = 90/191 (47%), Gaps = 11/191 (5%)

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR---PIFRPRLVEA 212
           R + P A  VV VSA  +H+  +L    + + G       GH D      P        A
Sbjct: 17  REDPPPA--VVLVSAGASHSVALLAGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAA 74

Query: 213 LKGVPCKQVTAGLNFT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV 271
             G+    V  G + T  +      V++ G    G+LGHG++ D  TP+ +  L+ +  +
Sbjct: 75  APGI--TSVICGADHTTAYSEDEQQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGI-KI 131

Query: 272 VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
            QIA G S+ LAVT  G V S+G   N  LG G   D L P+ IQ+F  +G+ V  ++AG
Sbjct: 132 KQIACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQSF--EGVCVKMIAAG 189

Query: 332 DEHVVALDSSG 342
            EH  A+   G
Sbjct: 190 AEHTAAVTEDG 200



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/161 (25%), Positives = 73/161 (45%), Gaps = 4/161 (2%)

Query: 110 SAGNMQITTGRYHTLLISNSS--VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ 167
           + G   +  G  HT   S     V+S G    G LGHG  ++   +   +       + Q
Sbjct: 75  APGITSVICGADHTTAYSEDEQQVYSWGWGDFGRLGHG-NSSDVFTPQPVKALQGIKIKQ 133

Query: 168 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
           ++  ++H   V  +G+V + G N +   G   T   +  P+ +++ +GV  K + AG   
Sbjct: 134 IACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLL-PQKIQSFEGVCVKMIAAGAEH 192

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 268
           T  +T  G ++  G   +G LG GD  DR  P+ ++ +E +
Sbjct: 193 TAAVTEDGDLYGWGWGRYGNLGLGDRNDRLVPEKVSSVENM 233



 Score = 51.2 bits (121), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 61/126 (48%), Gaps = 4/126 (3%)

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPS 279
           V+AG + +  L     + + G    GQLGHGD  DR  P  ++  +     +  +  G  
Sbjct: 27  VSAGASHSVALLAGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAAAPGITSVICGAD 86

Query: 280 YMLAVTGN-GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           +  A + +   VYS+G G    LGHG   D   P+ ++    +GI + +++ GD H +A+
Sbjct: 87  HTTAYSEDEQQVYSWGWGDFGRLGHGNSSDVFTPQPVKAL--QGIKIKQIACGDSHCLAV 144

Query: 339 DSSGYV 344
             +G V
Sbjct: 145 TMAGEV 150


>gi|168018623|ref|XP_001761845.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162686900|gb|EDQ73286.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1131

 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/169 (34%), Positives = 88/169 (52%), Gaps = 7/169 (4%)

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            HAA V + G+VFT G+ S    GH   +  +  P+LVEAL     + V  G      +T
Sbjct: 322 KHAALVTKQGEVFTWGEESGGRLGH-GVDCDVSHPQLVEALASSTTEVVACGEYHACAVT 380

Query: 233 IRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVTGNGV 289
           + G +++ G  TH  G LGHG+ +    PK +  PLE +  V  IA GP +   VT  G+
Sbjct: 381 LSGDLYSWGDGTHNLGLLGHGNDISHWIPKRVNGPLEGL-RVASIACGPWHTALVTTTGL 439

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           +++FG G+   LGH ++     PR +++   KG+  VR + G  H  A+
Sbjct: 440 LFTFGDGTFGVLGHNDRKSAYSPREVESL--KGLRTVRAACGVWHTAAV 486



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 101/228 (44%), Gaps = 16/228 (7%)

Query: 116 ITTGRYHTLLISNSSV-FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G +HT L++ + + F+ G    GVLGH  +     S   +        V+ +    H
Sbjct: 424 IACGPWHTALVTTTGLLFTFGDGTFGVLGHN-DRKSAYSPREVESLKGLRTVRAACGVWH 482

Query: 175 AAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            A V++            SG++FT GD      GH D  + +  P  V AL     +QV 
Sbjct: 483 TAAVVEVMVGSSSAGSCSSGKLFTWGDGEKGRLGHGDKEQRLV-PTCVAALVDHNFRQVA 541

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
            G + T  LT +G V T GS+T+GQLG     D   P  +        V  IA G  ++ 
Sbjct: 542 CGYSLTVALTTKGGVFTMGSSTYGQLGDPQA-DGKLPGLVEGKLVEAYVEDIACGAHHVA 600

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
            +T N  VY++G G+N  LGHG+  D   P  ++  + K +  +   A
Sbjct: 601 VLTHNSEVYTWGKGANGRLGHGDLEDRNTPTLVEALKEKQVKSIACGA 648



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 68/239 (28%), Positives = 107/239 (44%), Gaps = 21/239 (8%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSL--CGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G YH   ++ S  ++S G      G+LGHG + +  +   R+N P     V  ++  
Sbjct: 369 VACGEYHACAVTLSGDLYSWGDGTHNLGLLGHGNDISHWIP-KRVNGPLEGLRVASIACG 427

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H A V  +G +FT GD +    GH D  +  + PR VE+LKG+   +   G+  T  +
Sbjct: 428 PWHTALVTTTGLLFTFGDGTFGVLGHND-RKSAYSPREVESLKGLRTVRAACGVWHTAAV 486

Query: 232 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
                          G + T G    G+LGHGD   R  P  +A L +  +  Q+A G S
Sbjct: 487 VEVMVGSSSAGSCSSGKLFTWGDGEKGRLGHGDKEQRLVPTCVAALVD-HNFRQVACGYS 545

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             +A+T  G V++ GS +   LG   Q D   P  ++  +    +V  ++ G  HV  L
Sbjct: 546 LTVALTTKGGVFTMGSSTYGQLGD-PQADGKLPGLVEG-KLVEAYVEDIACGAHHVAVL 602



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 100/241 (41%), Gaps = 20/241 (8%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA-SENHAAF 177
           G++  L+     VF+ G    G LGHG +    VS  ++    A+   +V A  E HA  
Sbjct: 321 GKHAALVTKQGEVFTWGEESGGRLGHGVDCD--VSHPQLVEALASSTTEVVACGEYHACA 378

Query: 178 VLQSGQVFTCGDNSSF--CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 235
           V  SG +++ GD +      GH +        R+   L+G+    +  G   T  +T  G
Sbjct: 379 VTLSGDLYSWGDGTHNLGLLGHGNDISHWIPKRVNGPLEGLRVASIACGPWHTALVTTTG 438

Query: 236 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV------ 289
            + T G  T G LGH D     +P+ +  L+ +   V+ A G  +  AV    V      
Sbjct: 439 LLFTFGDGTFGVLGHNDRKSAYSPREVESLKGL-RTVRAACGVWHTAAVVEVMVGSSSAG 497

Query: 290 ------VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
                 ++++G G    LGHG++   L P  +           +V+ G    VAL + G 
Sbjct: 498 SCSSGKLFTWGDGEKGRLGHGDKEQRLVPTCVAALVDHNFR--QVACGYSLTVALTTKGG 555

Query: 344 V 344
           V
Sbjct: 556 V 556



 Score = 47.0 bits (110), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 37/140 (26%), Positives = 67/140 (47%), Gaps = 4/140 (2%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E+   +  + +  G      +T +G V T G  + G+LGHG   D   P+ +  L 
Sbjct: 303 PKPLESALVLDVQLIACGGKHAALVTKQGEVFTWGEESGGRLGHGVDCDVSHPQLVEALA 362

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF--CLGHGEQHDELQPRAIQTFRRKGIH 324
              + V +A G  +  AVT +G +YS+G G++    LGHG       P+ +     +G+ 
Sbjct: 363 SSTTEV-VACGEYHACAVTLSGDLYSWGDGTHNLGLLGHGNDISHWIPKRVNG-PLEGLR 420

Query: 325 VVRVSAGDEHVVALDSSGYV 344
           V  ++ G  H   + ++G +
Sbjct: 421 VASIACGPWHTALVTTTGLL 440



 Score = 37.7 bits (86), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 48/110 (43%), Gaps = 4/110 (3%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L +   VF+ GSS  G LG      +            A+V  ++   +H A +  + +V
Sbjct: 550 LTTKGGVFTMGSSTYGQLGDPQADGKLPGLVEGKL-VEAYVEDIACGAHHVAVLTHNSEV 608

Query: 185 FTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           +T G  ++   GH D  +R    P LVEALK    K +  G  FT  + +
Sbjct: 609 YTWGKGANGRLGHGDLEDRNT--PTLVEALKEKQVKSIACGATFTAAICL 656


>gi|332028555|gb|EGI68592.1| Putative E3 ubiquitin-protein ligase HERC4 [Acromyrmex echinatior]
          Length = 1049

 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 70/235 (29%), Positives = 114/235 (48%), Gaps = 8/235 (3%)

Query: 86  CNGNWKRVLRFLQSVEHSSDIVETSAGNM--QITTGRYHTLLISNS-SVFSCGSSLCGVL 142
           CN N +  L  +   E    +++    N+  QI  G  H++ ++N   +++ GS+  G L
Sbjct: 110 CNMNGQLGLNSVDCTERVPRMIKVLGTNVIVQIACGTEHSIALTNDGELYAWGSNREGQL 169

Query: 143 GHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR 202
           G G  TT  +   RI+  +A  +  ++    H   + +SG VF+ G N+    G  D  +
Sbjct: 170 GLGSYTTTEIKPKRISTLAAVPIAFIACGGYHTIVISKSGAVFSWGRNTFGQLGLNDVQQ 229

Query: 203 PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
               P  +  L+       T G  F+ FLT+ G V TCG+  +GQLGHG+T +   P+ +
Sbjct: 230 RNL-PCQLRTLRNAKVCYATCGEEFSVFLTMDGGVFTCGAGMYGQLGHGNTTNEILPRQV 288

Query: 263 APLEEVGS-VVQIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAI 315
             +E +GS V QI+ G  + LA V   G VY++G G    LG+        P+ +
Sbjct: 289 --MELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLGNRASQSATTPQVV 341



 Score = 81.6 bits (200), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 61/218 (27%), Positives = 108/218 (49%), Gaps = 11/218 (5%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 189
           +F  GS++ G LG G    + +   R ++F  A++V Q++  EN+   + + G+V++CG+
Sbjct: 1   MFCWGSTIHGELGLGGIEDENIFMPREVDFIEASNVEQIACGENYTVAITKEGKVYSCGN 60

Query: 190 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
           N     GH    +   R +L+  L     +++  G   T  +   G + + G N +GQLG
Sbjct: 61  NDYGQLGHEKARK---RLQLIPGLDAFVFRKIACGNCHTLAVNEWGQLFSWGCNMNGQLG 117

Query: 250 HG--DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-Q 306
               D  +R  P+ I  L     +VQIA G  + +A+T +G +Y++GS     LG G   
Sbjct: 118 LNSVDCTER-VPRMIKVL-GTNVIVQIACGTEHSIALTNDGELYAWGSNREGQLGLGSYT 175

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             E++P+ I T     + +  ++ G  H + +  SG V
Sbjct: 176 TTEIKPKRISTL--AAVPIAFIACGGYHTIVISKSGAV 211



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 70/246 (28%), Positives = 108/246 (43%), Gaps = 11/246 (4%)

Query: 105 DIVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA 163
           D +E S    QI  G  +T+ I+    V+SCG++  G LGH     +      ++    A
Sbjct: 29  DFIEASNVE-QIACGENYTVAITKEGKVYSCGNNDYGQLGHEKARKRLQLIPGLD----A 83

Query: 164 HVVQVSASEN-HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            V +  A  N H   V + GQ+F+ G N +   G    +     PR+++ L      Q+ 
Sbjct: 84  FVFRKIACGNCHTLAVNEWGQLFSWGCNMNGQLGLNSVDCTERVPRMIKVLGTNVIVQIA 143

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGD-TLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
            G   +  LT  G ++  GSN  GQLG G  T     PK I+ L  V  +  IA G  + 
Sbjct: 144 CGTEHSIALTNDGELYAWGSNREGQLGLGSYTTTEIKPKRISTLAAV-PIAFIACGGYHT 202

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           + ++ +G V+S+G  +   LG  +      P  ++T R     V   + G+E  V L   
Sbjct: 203 IVISKSGAVFSWGRNTFGQLGLNDVQQRNLPCQLRTLRNA--KVCYATCGEEFSVFLTMD 260

Query: 342 GYVSLC 347
           G V  C
Sbjct: 261 GGVFTC 266


>gi|395770833|ref|ZP_10451348.1| hypothetical protein Saci8_13710 [Streptomyces acidiscabies 84-104]
          Length = 393

 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 73/241 (30%), Positives = 112/241 (46%), Gaps = 16/241 (6%)

Query: 105 DIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH 164
           D+ + SAG    ++    TL  ++ +V + G +  G LG+G  T Q V  T    P   +
Sbjct: 64  DVDQMSAGG--TSSADSFTLARTDKTVKAWGHNSAGQLGNGGNTNQAVPTT---VPRLTN 118

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVP-CKQVTA 223
           V  ++A   HA  +  SGQV++ GDNS    G+  T      P  V+   G+P  KQ++A
Sbjct: 119 VKDIAAGGKHALALDTSGQVYSWGDNSYGQLGNNRTGDSRTVPDRVQ---GMPKAKQISA 175

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G +F+  L   G V+  G   HGQLG G+      P+ +  LE+   +V+I AG  + LA
Sbjct: 176 GCDFSLALLENGKVYAWGRGIHGQLGTGNRATSSVPRQVTGLED---IVKIDAGCYHALA 232

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           +T +  V S+G      LG+        P  +         V  + AG  H  A+ S  +
Sbjct: 233 ITADNTVKSWGYNLYGQLGNSATKSSTVPVDVDWL----TDVSDIEAGAWHNYAMTSDSH 288

Query: 344 V 344
           V
Sbjct: 289 V 289



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 85/199 (42%), Gaps = 19/199 (9%)

Query: 115 QITTG-RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI+ G  +   L+ N  V++ G  + G LG G   T  V            +V++ A   
Sbjct: 172 QISAGCDFSLALLENGKVYAWGRGIHGQLGTGNRATSSVPRQVTGLED---IVKIDAGCY 228

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           HA  +     V + G N     G+  T      P  V+ L  V   +  A  N+   +T 
Sbjct: 229 HALAITADNTVKSWGYNLYGQLGNSATKSSTV-PVDVDWLTDVSDIEAGAWHNYA--MTS 285

Query: 234 RGHVHTCGSNTHGQLGHGDTLD--------RPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
             HV+  G+N +GQL  GD  D        R  P  I  LE    V  +AAG  + +AVT
Sbjct: 286 DSHVYGWGNNQYGQLLEGDQADGDNISRTNRTAPVEIPRLE---GVQHLAAGARHGVAVT 342

Query: 286 GNGVVYSFGSGSNFCLGHG 304
            +  V+++G+ S   LG+G
Sbjct: 343 ADD-VFTWGNNSEGQLGNG 360



 Score = 43.5 bits (101), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 58/113 (51%), Gaps = 11/113 (9%)

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG-----PSYMLAVTGNGVVY 291
           V + G+   GQLG+G   D  +P S+  L   G V Q++AG      S+ LA T +  V 
Sbjct: 32  VLSWGAGRTGQLGNGTLSDSLSPASVTSLFR-GDVDQMSAGGTSSADSFTLART-DKTVK 89

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           ++G  S   LG+G   ++  P  +        +V  ++AG +H +ALD+SG V
Sbjct: 90  AWGHNSAGQLGNGGNTNQAVPTTVPRL----TNVKDIAAGGKHALALDTSGQV 138



 Score = 39.3 bits (90), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 80/175 (45%), Gaps = 24/175 (13%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           ++I  G YH L I+ +++V S G +L G LG+    +  V    +++ +    ++  A  
Sbjct: 221 VKIDAGCYHALAITADNTVKSWGYNLYGQLGNSATKSSTVPV-DVDWLTDVSDIEAGAWH 279

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRD---------TNR--PIFRPRLVEALKGVPCKQV 221
           N+A  +     V+  G+N        D         TNR  P+  PRL    +GV  + +
Sbjct: 280 NYA--MTSDSHVYGWGNNQYGQLLEGDQADGDNISRTNRTAPVEIPRL----EGV--QHL 331

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            AG    G       V T G+N+ GQLG+G T+ R    S+  L+E  ++  + A
Sbjct: 332 AAGARH-GVAVTADDVFTWGNNSEGQLGNGTTVSR--FDSVKILQEGSAIKNVTA 383


>gi|348550629|ref|XP_003461134.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cavia porcellus]
          Length = 4725

 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/237 (28%), Positives = 109/237 (45%), Gaps = 17/237 (7%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 169
           + G ++  L +   V+S G    G LGHG       P+     S  +       HVV ++
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTLPLEEPKVISAFSGKQ----GGKHVVHIA 558

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G     
Sbjct: 559 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQ 617

Query: 230 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
            L +   G V + G   +G+LG G +    TPK I  L+++  V+++  G  + +A+T +
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVIKVRCGSQFSIALTKD 676

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V
Sbjct: 677 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEV 731



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 117/251 (46%), Gaps = 12/251 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 3921 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 3974

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVE L+G
Sbjct: 3975 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEVLQG 4033

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4034 HRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4092

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4093 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4150

Query: 334  HVVALDSSGYV 344
            H V     G V
Sbjct: 4151 HCVCCTEDGEV 4161



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/221 (31%), Positives = 110/221 (49%), Gaps = 12/221 (5%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFT 186
             V++CG +  G LG G  ++  V   R     +++VV+   V +   HA  +   G+VF+
Sbjct: 3013 KVYACGEATNGRLGLG-LSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3071

Query: 187  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
             G+      GH  +     +PRL+EALK    + +  G + +  LT  G ++T G   +G
Sbjct: 3072 WGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 3130

Query: 247  QLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGH 303
            +LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG 
Sbjct: 3131 RLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGR 3188

Query: 304  GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            G       P+ I+  R  G  V ++  G +  +AL  SG V
Sbjct: 3189 GGSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVV 3227



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 91/190 (47%), Gaps = 11/190 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2991 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPI--PRQITALSSYVV 3048

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L +   +  IA 
Sbjct: 3049 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL-KTKRIRDIAC 3107

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3108 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3165

Query: 335  VVALDSSGYV 344
             +AL   G V
Sbjct: 3166 TLALTDEGLV 3175



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/187 (31%), Positives = 94/187 (50%), Gaps = 20/187 (10%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 502

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDTL    PK I+    ++ G  VV IA G +
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTLPLEEPKVISAFSGKQGGKHVVHIACGST 562

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 620

Query: 338 LDSSGYV 344
           +  +G V
Sbjct: 621 VTENGQV 627



 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/184 (29%), Positives = 89/184 (48%), Gaps = 6/184 (3%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
            S+  +++  A+   +A  +++ +VF  G N     G    ++ I  P   E L  +   Q
Sbjct: 2940 SSGSLIRKKAAGLESAATIRT-KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQ 2997

Query: 221  VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGP 278
            V  G      +T+ G V+ CG  T+G+LG G  +   P P+ I  L   V   V + +G 
Sbjct: 2998 VAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGG 3057

Query: 279  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             +  A+T +G V+S+G G +  LGH  + +  +PR I+  + K I    ++ G  H  AL
Sbjct: 3058 RHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAAL 3115

Query: 339  DSSG 342
             SSG
Sbjct: 3116 TSSG 3119



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/177 (31%), Positives = 81/177 (45%), Gaps = 5/177 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3057 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3115

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3116 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3174

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++
Sbjct: 3175 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTW 3230



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 82/177 (46%), Gaps = 5/177 (2%)

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA--FV 178
           Y   + +   +++ G    G LGHG    + +            V+ V+     A    V
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAV 621

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
            ++GQV++ GD      G R  +     P+L+E L+ +   +V  G  F+  LT  G V+
Sbjct: 622 TENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVY 680

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
           + G   + +LGHG       PK +  L+    V+ +AAG ++ LA+T +  V+S+GS
Sbjct: 681 SWGKGDNQRLGHGTEEHVRYPKLLEGLQG-KKVIDVAAGSTHCLALTEDSEVHSWGS 736



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4043 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4101

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4102 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4160

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4161 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4206



 Score = 54.7 bits (130), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       V++V      + 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVIKVRCGSQFSI 671

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 731 VHSWGSNDQCQ--HFDTLRVTKPEPTALPGL-DTKHIVGIACGPAQSFA 776



 Score = 47.8 bits (112), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 67/137 (48%), Gaps = 3/137 (2%)

Query: 207  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            P   EAL  +   Q+  G      +T  G ++  G    G+LG G T    TP  +  ++
Sbjct: 3867 PTPCEALATLRPIQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQ 3926

Query: 267  EVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
             V    V + +G  + LA++  G VYS+G   +  LGHG +    +PR I++ R  GI V
Sbjct: 3927 HVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLR--GIEV 3984

Query: 326  VRVSAGDEHVVALDSSG 342
            V V+AG  H   + ++G
Sbjct: 3985 VDVAAGGAHSACVTAAG 4001


>gi|326511771|dbj|BAJ92030.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 442

 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/230 (30%), Positives = 111/230 (48%), Gaps = 9/230 (3%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVS--FTRINFPSAAHVVQVSASE 172
           I+ G  H+  L+S   V S G    G LGHG    + V    T  + P    V+    ++
Sbjct: 26  ISAGANHSAALLSGQMVCSWGRGEDGQLGHGDSEDRPVPTVLTSFDVPRVTSVI--CGAD 83

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           +  A+     Q+++ G       GH +++  +F P+ + AL+G+  KQ+  G +    +T
Sbjct: 84  HTIAYSDDEMQLYSWGWGDFGRLGHGNSSD-VFNPQPIVALQGMKIKQIACGDSHCLTVT 142

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G VH+ G N +GQLG G+  D   P+ I   E V  V  IAAG  +  A+T  G +Y 
Sbjct: 143 FNGQVHSWGRNQNGQLGLGNNQDSLLPQKIKAFEGV-CVKMIAAGAEHTTAITEGGDLYG 201

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           +G G    LG  ++ D   P  + +   +G  +V V+ G  H V++ SSG
Sbjct: 202 WGWGRYGNLGLSDRDDRSVPEKVSSV--EGEKMVLVACGWRHSVSVSSSG 249



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 98/209 (46%), Gaps = 6/209 (2%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G  HT  I+    ++  G    G LG      + V   +++      +V V+    H
Sbjct: 183 IAAGAEHTTAITEGGDLYGWGWGRYGNLGLSDRDDRSVP-EKVSSVEGEKMVLVACGWRH 241

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           +  V  SG ++T G +     GH D    +  PR +EALK VP  Q++ G   T  +   
Sbjct: 242 SVSVSSSGALYTYGWSKYGQLGHGDFQDHLV-PRKLEALKDVPISQISGGWRHTMAVAED 300

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
           G ++  G N  GQ+G  D +D  +P  +  P E+   +VQ+A G  + LA+T N  ++S+
Sbjct: 301 GKLYGWGWNKFGQVGVEDNVDHCSPVEVNFPDEQ--KIVQVACGWRHTLALTENKNIFSW 358

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           G G++  LGHGE  D   P+ I      G
Sbjct: 359 GRGASGQLGHGEIIDRNTPKMIDALSLDG 387



 Score = 78.6 bits (192), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 58/180 (32%), Positives = 91/180 (50%), Gaps = 7/180 (3%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTA 223
           V+ +SA  NH+A +L    V + G       GH D+ +RP+  P ++ +        V  
Sbjct: 23  VILISAGANHSAALLSGQMVCSWGRGEDGQLGHGDSEDRPV--PTVLTSFDVPRVTSVIC 80

Query: 224 GLNFT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
           G + T  +      +++ G    G+LGHG++ D   P+ I  L+ +  + QIA G S+ L
Sbjct: 81  GADHTIAYSDDEMQLYSWGWGDFGRLGHGNSSDVFNPQPIVALQGM-KIKQIACGDSHCL 139

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            VT NG V+S+G   N  LG G   D L P+ I+ F  +G+ V  ++AG EH  A+   G
Sbjct: 140 TVTFNGQVHSWGRNQNGQLGLGNNQDSLLPQKIKAF--EGVCVKMIAAGAEHTTAITEGG 197



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 69/159 (43%), Gaps = 3/159 (1%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  H++ +S+S ++++ G S  G LGHG      V   ++       + Q+S    H
Sbjct: 235 VACGWRHSVSVSSSGALYTYGWSKYGQLGHGDFQDHLVP-RKLEALKDVPISQISGGWRH 293

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V + G+++  G N     G  D N     P  V         QV  G   T  LT  
Sbjct: 294 TMAVAEDGKLYGWGWNKFGQVGVED-NVDHCSPVEVNFPDEQKIVQVACGWRHTLALTEN 352

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            ++ + G    GQLGHG+ +DR TPK I  L   GS  +
Sbjct: 353 KNIFSWGRGASGQLGHGEIIDRNTPKMIDALSLDGSACK 391


>gi|338723782|ref|XP_001915115.2| PREDICTED: LOW QUALITY PROTEIN: e3 ISG15--protein ligase HERC5
           [Equus caballus]
          Length = 966

 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 77/222 (34%), Positives = 107/222 (48%), Gaps = 7/222 (3%)

Query: 99  SVEHSS-DIVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR 156
           S+EH+    V      +QIT G YH+L +S    +F+ G +  G LG G       +   
Sbjct: 69  SIEHARFQCVLQEKNIIQITCGDYHSLALSKGGELFAWGQNTYGQLGVGRTFASTPTPQI 128

Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
           +   S   +VQ+SA E H+  +  S  V++ G N     G   TN     P L+EAL   
Sbjct: 129 VEHLSGVPLVQISAGEAHSMALSMSRNVYSWGRNDCGQLGLGHTNNKD-SPSLIEALDNQ 187

Query: 217 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIA 275
             + +  G + T  LT  G V T G+   GQLGH  T +  TP  +  L  VG  V QIA
Sbjct: 188 EVEFLACGGSHTALLTKDGLVFTFGAGKCGQLGHNSTQNELTPCLVTEL--VGKRVTQIA 245

Query: 276 AGPSYMLA-VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
            G  + LA V+  G V+SFGSG    LG+G  H +L P  ++
Sbjct: 246 CGRRHTLAYVSDLGKVFSFGSGEGGQLGNGATHHQLIPLPMK 287



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 52/174 (29%), Positives = 92/174 (52%), Gaps = 3/174 (1%)

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
           +++Q++  + H+  + + G++F  G N+    G   T      P++VE L GVP  Q++A
Sbjct: 83  NIIQITCGDYHSLALSKGGELFAWGQNTYGQLGVGRTFASTPTPQIVEHLSGVPLVQISA 142

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G   +  L++  +V++ G N  GQLG G T ++ +P  I  L+    V  +A G S+   
Sbjct: 143 GEAHSMALSMSRNVYSWGRNDCGQLGLGHTNNKDSPSLIEALDN-QEVEFLACGGSHTAL 201

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           +T +G+V++FG+G    LGH    +EL P  +      G  V +++ G  H +A
Sbjct: 202 LTKDGLVFTFGAGKCGQLGHNSTQNELTPCLVTEL--VGKRVTQIACGRRHTLA 253


>gi|340378681|ref|XP_003387856.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
           [Amphimedon queenslandica]
          Length = 599

 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 76/249 (30%), Positives = 120/249 (48%), Gaps = 15/249 (6%)

Query: 105 DIVETSAGN--MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP- 160
           ++VE+  G     I  G  HT+ L S   VFS G+   G LGHG    +  S   I+ P 
Sbjct: 187 NVVESLLGQNVTMIACGGSHTIALNSKGQVFSWGAGPQGCLGHGNLRDR-YSPLMIDGPL 245

Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
              +VV V+  ENH+A + + G ++T G    F     D+     +PRLV+AL G    Q
Sbjct: 246 RDVNVVHVACYENHSAVISEDGNLYTWGKAGPFLGYMDDSVTKQTKPRLVDALYGTRIVQ 305

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQL--GHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
           V  G + T  +   G V++ G N  G+L  GH   + +PT   + P   + S+ +++ G 
Sbjct: 306 VACGRSHTLVIDEEGRVYSFGINKFGELGQGHDKAITKPT---MVP--NLVSICKVSCGR 360

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            +  A+  +GV++ +G G+   LG GE      P  +  F  + +    VS G  H  A+
Sbjct: 361 HHSAAIDEDGVLFMWGWGARGQLGQGEPKSLFSPTPVNGFNDQPLE--DVSCGYGHTAAI 418

Query: 339 DSSGYVSLC 347
            ++G V+ C
Sbjct: 419 TANG-VAYC 426



 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 55/181 (30%), Positives = 82/181 (45%), Gaps = 9/181 (4%)

Query: 115 QITTGRYHTLLISNSSV-FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           +++ GR+H+  I    V F  G    G LG G E     S T +N  +   +  VS    
Sbjct: 355 KVSCGRHHSAAIDEDGVLFMWGWGARGQLGQG-EPKSLFSPTPVNGFNDQPLEDVSCGYG 413

Query: 174 HAAFVLQSGQVFTCGDNSSFCCG-HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           H A +  +G  +  GDN+S  CG        +  PR +    G+   Q+  G NFT  +T
Sbjct: 414 HTAAITANGVAYCWGDNASSQCGVPSSVYGELSSPRGIVLPSGIRPTQINCGANFTVLVT 473

Query: 233 IRGHVHTCGSNTHGQLGHGD---TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             G + T G N  GQLG+G+   T  +P P  +  L E   V  +A G  ++  + G+G 
Sbjct: 474 SIGQLFTWGCNMSGQLGNGEAKKTFSQPMP--VESLSE-KRVKMVACGEDHIGCLVGHGW 530

Query: 290 V 290
           V
Sbjct: 531 V 531


>gi|326509355|dbj|BAJ91594.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518534|dbj|BAJ88296.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 442

 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/230 (30%), Positives = 111/230 (48%), Gaps = 9/230 (3%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVS--FTRINFPSAAHVVQVSASE 172
           I+ G  H+  L+S   V S G    G LGHG    + V    T  + P    V+    ++
Sbjct: 26  ISAGANHSAALLSGQMVCSWGRGEDGQLGHGDSEDRPVPTVLTSFDVPRVTSVI--CGAD 83

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           +  A+     Q+++ G       GH +++  +F P+ + AL+G+  KQ+  G +    +T
Sbjct: 84  HTIAYSDDEMQLYSWGWGDFGRLGHGNSSD-VFNPQPIVALQGMKIKQIACGDSHCLTVT 142

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G VH+ G N +GQLG G+  D   P+ I   E V  V  IAAG  +  A+T  G +Y 
Sbjct: 143 FNGQVHSWGRNQNGQLGLGNNQDSLLPQKIKAFEGV-CVKMIAAGAEHTTAITEGGDLYG 201

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           +G G    LG  ++ D   P  + +   +G  +V V+ G  H V++ SSG
Sbjct: 202 WGWGRYGNLGLSDRDDRSVPEKVSSV--EGEKMVLVACGWRHSVSVSSSG 249



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 98/209 (46%), Gaps = 6/209 (2%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G  HT  I+    ++  G    G LG      + V   +++      +V V+    H
Sbjct: 183 IAAGAEHTTAITEGGDLYGWGWGRYGNLGLSDRDDRSVP-EKVSSVEGEKMVLVACGWRH 241

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           +  V  SG ++T G +     GH D    +  PR +EALK VP  Q++ G   T  +   
Sbjct: 242 SVSVSSSGALYTYGWSKYGQLGHGDFQDHLV-PRKLEALKDVPISQISGGWRHTMAVAED 300

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
           G ++  G N  GQ+G  D +D  +P  +  P E+   +VQ+A G  + LA+T N  ++S+
Sbjct: 301 GKLYGWGWNKFGQVGVEDNVDHCSPVEVNFPDEQ--KIVQVACGWRHTLALTENKNIFSW 358

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           G G++  LGHGE  D   P+ I      G
Sbjct: 359 GRGASGQLGHGEIIDRNTPKMIDALSLDG 387



 Score = 78.6 bits (192), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 58/180 (32%), Positives = 91/180 (50%), Gaps = 7/180 (3%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTA 223
           V+ +SA  NH+A +L    V + G       GH D+ +RP+  P ++ +        V  
Sbjct: 23  VILISAGANHSAALLSGQMVCSWGRGEDGQLGHGDSEDRPV--PTVLTSFDVPRVTSVIC 80

Query: 224 GLNFT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
           G + T  +      +++ G    G+LGHG++ D   P+ I  L+ +  + QIA G S+ L
Sbjct: 81  GADHTIAYSDDEMQLYSWGWGDFGRLGHGNSSDVFNPQPIVALQGM-KIKQIACGDSHCL 139

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            VT NG V+S+G   N  LG G   D L P+ I+ F  +G+ V  ++AG EH  A+   G
Sbjct: 140 TVTFNGQVHSWGRNQNGQLGLGNNQDSLLPQKIKAF--EGVCVKMIAAGAEHTTAITEGG 197



 Score = 54.3 bits (129), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 82/197 (41%), Gaps = 16/197 (8%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  H++ +S+S ++++ G S  G LGHG      V   ++       + Q+S    H
Sbjct: 235 VACGWRHSVSVSSSGALYTYGWSKYGQLGHGDFQDHLVP-RKLEALKDVPISQISGGWRH 293

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V + G+++  G N     G  D N     P  V         QV  G   T  LT  
Sbjct: 294 TMAVAEDGKLYGWGWNKFGQVGVED-NVDHCSPVEVNFPDEQKIVQVACGWRHTLALTEN 352

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-------------VQIAAGPSYM 281
            ++ + G    GQLGHG+ +DR TPK I  L   GS              V++   PS  
Sbjct: 353 KNIFSWGRGASGQLGHGEIIDRNTPKMIDALSLDGSACKQLESSNVVPMTVKVWVSPSER 412

Query: 282 LAVTGNGVVYSFGSGSN 298
            A+  +  V   G+G++
Sbjct: 413 FALVPDENVCKSGNGTD 429


>gi|224496032|ref|NP_001139103.1| probable E3 ubiquitin-protein ligase HERC4-like [Danio rerio]
          Length = 992

 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/179 (32%), Positives = 89/179 (49%), Gaps = 5/179 (2%)

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
            V+Q++  + H+  +   GQ+F  G+N+    G R        P+ +++L  +P  Q++A
Sbjct: 116 QVIQIACGDQHSMALSNDGQLFVWGENTHGQLGLRKEQAGTQSPQHLQSLCEIPVAQISA 175

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYML 282
           G N +  L++ G V   GSN+ GQLG GDT DR  P  +  L   G   V I+ G  +  
Sbjct: 176 GGNHSFVLSLSGVVFGWGSNSAGQLGLGDTKDRFVPTIVKSL--CGKKTVSISCGGEHTA 233

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
            ++  G V++FGSG    LGH    DE  PR I      G  V +V+ G  H +  + S
Sbjct: 234 TLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLIAELW--GSKVSQVTCGRHHTLVFEES 290



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 68/196 (34%), Positives = 93/196 (47%), Gaps = 6/196 (3%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QI  G  H++ +SN   +F  G +  G LG   E     S   +       V Q+SA  
Sbjct: 118 IQIACGDQHSMALSNDGQLFVWGENTHGQLGLRKEQAGTQSPQHLQSLCEIPVAQISAGG 177

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           NH+  +  SG VF  G NS+   G  DT +  F P +V++L G     ++ G   T  L+
Sbjct: 178 NHSFVLSLSGVVFGWGSNSAGQLGLGDT-KDRFVPTIVKSLCGKKTVSISCGGEHTATLS 236

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLAVT-GNGVV 290
             G V T GS   GQLGH    D   P+ IA L   GS V Q+  G  + L     + ++
Sbjct: 237 KGGTVFTFGSGGFGQLGHNSLKDEHHPRLIAEL--WGSKVSQVTCGRHHTLVFEESSKLI 294

Query: 291 YSFGSGSNFCLGHGEQ 306
           YSFG G    LG+GEQ
Sbjct: 295 YSFGCGMQGQLGNGEQ 310



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 53/202 (26%), Positives = 88/202 (43%), Gaps = 13/202 (6%)

Query: 151 CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV--FTCGDNSSFCCGHRDTNRPIFRP- 207
           C+ F R    S   +    A E      LQ+ ++    CG+  +      D  + +    
Sbjct: 45  CIGFIREGKVSVLRLHNEDADEKLEPLQLQNERIRSIVCGEAGAVLLA--DDGKVLIMDQ 102

Query: 208 ----RLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGDTLDRPTPKSI 262
               R +++L+     Q+  G   +  L+  G +   G NTHGQLG   +     +P+ +
Sbjct: 103 STVCRPLKSLENRQVIQIACGDQHSMALSNDGQLFVWGENTHGQLGLRKEQAGTQSPQHL 162

Query: 263 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
             L E+  V QI+AG ++   ++ +GVV+ +GS S   LG G+  D   P  +++    G
Sbjct: 163 QSLCEI-PVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTKDRFVPTIVKSL--CG 219

Query: 323 IHVVRVSAGDEHVVALDSSGYV 344
              V +S G EH   L   G V
Sbjct: 220 KKTVSISCGGEHTATLSKGGTV 241


>gi|148234239|ref|NP_001080313.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Xenopus laevis]
 gi|28278605|gb|AAH44119.1| Chc1l-prov protein [Xenopus laevis]
          Length = 526

 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/219 (29%), Positives = 101/219 (46%), Gaps = 4/219 (1%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQ 183
           +  N  VF  G++  G LG G +    +   RI+  S   +V +S  S  H   V   G+
Sbjct: 36  ITKNDEVFVMGTNSSGCLGTG-DAQSIIEPRRIDMLSGKRIVSLSYGSGPHVVIVTSDGE 94

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           V++ G N+    G+  TN+ +   ++   L       V  G + +  LT  G V+  G N
Sbjct: 95  VYSWGHNAYSQLGNGSTNQALSPCQVSTNLINKKAHSVACGSHHSMVLTCDGEVYAWGYN 154

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 303
             GQ+G G T ++P P+ +    +  +V+ IA G    +AV  NG VY++G   N  LG 
Sbjct: 155 NSGQVGSGSTANQPIPRKVTSCLQNKTVIGIACGQMSSMAVVDNGEVYAWGYNGNGQLGL 214

Query: 304 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           G   +  QP   +    +GI V +V  G  H +AL   G
Sbjct: 215 GSSGN--QPTPCRIAALQGIRVEQVVCGYAHTLALTDEG 251



 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 92/183 (50%), Gaps = 8/183 (4%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G +H+++++ +  V++ G +  G +G G    Q +     +      V+ ++  +  
Sbjct: 132 VACGSHHSMVLTCDGEVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQNKTVIGIACGQMS 191

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           +  V+ +G+V+  G N +   G   + N+P   P  + AL+G+  +QV  G   T  LT 
Sbjct: 192 SMAVVDNGEVYAWGYNGNGQLGLGSSGNQPT--PCRIAALQGIRVEQVVCGYAHTLALTD 249

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS--YMLAVTGNGVVY 291
            G ++  G+N++GQLG G+  ++  P  +   +E   +V+IAA  S     A + +G VY
Sbjct: 250 EGVMYAWGANSYGQLGTGNKSNQSYPVQVIVDKE--RIVEIAACHSSHTSAAKSQSGQVY 307

Query: 292 SFG 294
            +G
Sbjct: 308 MWG 310



 Score = 44.3 bits (103), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 63/144 (43%), Gaps = 5/144 (3%)

Query: 203 PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           PIF     E LK +    V    N   ++T    V   G+N+ G LG GD      P+ I
Sbjct: 8   PIFALCPQEVLKFIQQACVFGAGNEVLYITKNDEVFVMGTNSSGCLGTGDAQSIIEPRRI 67

Query: 263 APLEEVGSV-VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQT-FRR 320
             L     V +   +GP +++ VT +G VYS+G  +   LG+G  +  L P  + T    
Sbjct: 68  DMLSGKRIVSLSYGSGP-HVVIVTSDGEVYSWGHNAYSQLGNGSTNQALSPCQVSTNLIN 126

Query: 321 KGIHVVRVSAGDEHVVALDSSGYV 344
           K  H   V+ G  H + L   G V
Sbjct: 127 KKAH--SVACGSHHSMVLTCDGEV 148


>gi|321470134|gb|EFX81111.1| hypothetical protein DAPPUDRAFT_50378 [Daphnia pulex]
          Length = 4502

 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 74/232 (31%), Positives = 109/232 (46%), Gaps = 15/232 (6%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGP----ETTQCVSFTRINFPSAAHVVQVSASENH 174
            GR+   L ++  VFS G    G LGHG     +T +C+        +   V  V+A  NH
Sbjct: 2794 GRHALALTADGRVFSWGEGDDGKLGHGDVTSLDTPRCIEAL-----NGFRVRDVAAGSNH 2848

Query: 175  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
            +A V  SG+++T G       GH D N     P+ VE+L G    QV+ G      L + 
Sbjct: 2849 SAAVTSSGELYTWGLGEYGRLGHGD-NLTQLTPKRVESLVGQRVVQVSCGSRDAQTLALV 2907

Query: 235  --GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V++ G    G+LG G +    +P  +  L  +G V  +  G  + +A+T NG VY+
Sbjct: 2908 EGGLVYSWGDGDFGKLGRGGSEGCSSPCLVDKLSGLG-VCHVECGAQFSVALTCNGHVYT 2966

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            +G G  F LGHG       P  ++  R  G  V+ VS G  H +A+  +G V
Sbjct: 2967 WGKGDYFRLGHGSDQHVRWPTLVEGLR--GKKVIGVSVGALHCLAVTDAGQV 3016



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 74/232 (31%), Positives = 108/232 (46%), Gaps = 23/232 (9%)

Query: 124  LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS-----AAHVVQ---VSASENHA 175
            L+  +   ++CG    G LG G           +N P      + HVV+   V +   HA
Sbjct: 2745 LVTQSGKAYACGEGSNGRLGLGHSRN-------VNSPHQITALSQHVVRKVAVHSGGRHA 2797

Query: 176  AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 235
              +   G+VF+ G+      GH D    +  PR +EAL G   + V AG N +  +T  G
Sbjct: 2798 LALTADGRVFSWGEGDDGKLGHGDVTS-LDTPRCIEALNGFRVRDVAAGSNHSAAVTSSG 2856

Query: 236  HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAG--PSYMLAVTGNGVVYS 292
             ++T G   +G+LGHGD L + TPK +  L  VG  VVQ++ G   +  LA+   G+VYS
Sbjct: 2857 ELYTWGLGEYGRLGHGDNLTQLTPKRVESL--VGQRVVQVSCGSRDAQTLALVEGGLVYS 2914

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            +G G    LG G       P  +      G+ V  V  G +  VAL  +G+V
Sbjct: 2915 WGDGDFGKLGRGGSEGCSSPCLVDKL--SGLGVCHVECGAQFSVALTCNGHV 2964



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 74/256 (28%), Positives = 114/256 (44%), Gaps = 14/256 (5%)

Query: 93   VLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCV 152
            V   L+S++H    V+  A N   + G++   L S   V+S G    G LGHG     C 
Sbjct: 3689 VPSLLESLQHV--FVKKVAVN---SGGKHCLALSSEGEVYSWGEGEDGKLGHG-NKLPCD 3742

Query: 153  SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA 212
                I       VV V+    H+A +   G+++T G       GH D++  + +P+LVEA
Sbjct: 3743 RPRIIESLRGKDVVDVACGGAHSAAITALGELYTWGKGRYGRLGHGDSDDQL-KPKLVEA 3801

Query: 213  LKGVPCKQVTAGLNFTGFLTIR----GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 268
            L G     V  G        I     G V + G   +G+LG G +     P  I  L  +
Sbjct: 3802 LLGYRVMDVACGSGDAQTCAITDEEGGTVWSWGDGDYGKLGRGGSDGCKIPTKIESLSGL 3861

Query: 269  GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 328
            G ++++  G  + +A++ NG VY++G G    LGHG      +P+ + T   +G  V+ +
Sbjct: 3862 G-IIKVECGSQFSVALSNNGSVYTWGKGDYHRLGHGVDEHVRRPKKVMTL--QGKKVISI 3918

Query: 329  SAGDEHVVALDSSGYV 344
            S G  H V     G V
Sbjct: 3919 STGALHCVVCTDQGEV 3934



 Score = 74.7 bits (182), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 97/206 (47%), Gaps = 12/206 (5%)

Query: 145  GPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNR 202
            GP+ ++      +++  +   + V+        V QSG+ + CG+  N     GH   +R
Sbjct: 2713 GPKGSKIKVPQAVDWTVSLQPISVAGGSKSLFLVTQSGKAYACGEGSNGRLGLGH---SR 2769

Query: 203  PIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 260
             +  P  + AL     ++V   +G      LT  G V + G    G+LGHGD     TP+
Sbjct: 2770 NVNSPHQITALSQHVVRKVAVHSGGRHALALTADGRVFSWGEGDDGKLGHGDVTSLDTPR 2829

Query: 261  SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR 320
             I  L     V  +AAG ++  AVT +G +Y++G G    LGHG+   +L P+ +++   
Sbjct: 2830 CIEALNGF-RVRDVAAGSNHSAAVTSSGELYTWGLGEYGRLGHGDNLTQLTPKRVESL-- 2886

Query: 321  KGIHVVRVSAG--DEHVVALDSSGYV 344
             G  VV+VS G  D   +AL   G V
Sbjct: 2887 VGQRVVQVSCGSRDAQTLALVEGGLV 2912



 Score = 70.9 bits (172), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 103/225 (45%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            +  G  H+  +++S  +++ G    G LGHG   TQ ++  R+       VVQVS     
Sbjct: 2842 VAAGSNHSAAVTSSGELYTWGLGEYGRLGHGDNLTQ-LTPKRVESLVGQRVVQVSCGSRD 2900

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +++ G V++ GD      G R  +     P LV+ L G+    V  G  F+  LT
Sbjct: 2901 AQTLALVEGGLVYSWGDGDFGKLG-RGGSEGCSSPCLVDKLSGLGVCHVECGAQFSVALT 2959

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              GHV+T G   + +LGHG       P  +  L     V+ ++ G  + LAVT  G V++
Sbjct: 2960 CNGHVYTWGKGDYFRLGHGSDQHVRWPTLVEGLRG-KKVIGVSVGALHCLAVTDAGQVFA 3018

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q     GI + RV+ G  H VA
Sbjct: 3019 WGDNDHGQQGNGSITVNRRPTLVQGI--DGIKITRVACGSSHSVA 3061



 Score = 50.8 bits (120), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 70/154 (45%), Gaps = 3/154 (1%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 189
            +V+S G    G LG G  +  C   T+I   S   +++V      +  +  +G V+T G 
Sbjct: 3829 TVWSWGDGDYGKLGRG-GSDGCKIPTKIESLSGLGIIKVECGSQFSVALSNNGSVYTWGK 3887

Query: 190  NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
                  GH   +  + RP+ V  L+G     ++ G       T +G V+T G N  GQLG
Sbjct: 3888 GDYHRLGH-GVDEHVRRPKKVMTLQGKKVISISTGALHCVVCTDQGEVYTWGDNDEGQLG 3946

Query: 250  HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
             G T     P+ +A L+    + +++ G ++ +A
Sbjct: 3947 DGTTTGIQKPRLVAALQN-KKINRVSCGSAHTVA 3979



 Score = 47.4 bits (111), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 77/181 (42%), Gaps = 7/181 (3%)

Query: 106  IVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV 165
            +V+ S G+    T      L+    V+S G    G LG G  +  C S   ++  S   V
Sbjct: 2891 VVQVSCGSRDAQT----LALVEGGLVYSWGDGDFGKLGRG-GSEGCSSPCLVDKLSGLGV 2945

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
              V      +  +  +G V+T G    F  GH  +++ +  P LVE L+G     V+ G 
Sbjct: 2946 CHVECGAQFSVALTCNGHVYTWGKGDYFRLGH-GSDQHVRWPTLVEGLRGKKVIGVSVGA 3004

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
                 +T  G V   G N HGQ G+G       P  +  ++ +  + ++A G S+ +A T
Sbjct: 3005 LHCLAVTDAGQVFAWGDNDHGQQGNGSITVNRRPTLVQGIDGI-KITRVACGSSHSVAWT 3063

Query: 286  G 286
             
Sbjct: 3064 A 3064



 Score = 46.6 bits (109), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 48/162 (29%), Positives = 75/162 (46%), Gaps = 4/162 (2%)

Query: 182  GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 241
            GQ++  G N     G  +  + +  P + EAL  +   Q+  G      +T  G V+  G
Sbjct: 3614 GQIYGWGHNHRGQLGGVEGAK-VKVPTVCEALSALRPIQLAGGEQTLFAITSDGRVYATG 3672

Query: 242  SNTHGQLGHGDTLDRPTPKSIAPLEEV-GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
                G+LG G       P  +  L+ V    V + +G  + LA++  G VYS+G G +  
Sbjct: 3673 YGAGGRLGIGGAESVTVPSLLESLQHVFVKKVAVNSGGKHCLALSSEGEVYSWGEGEDGK 3732

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            LGHG +    +PR I++ R  G  VV V+ G  H  A+ + G
Sbjct: 3733 LGHGNKLPCDRPRIIESLR--GKDVVDVACGGAHSAAITALG 3772



 Score = 38.9 bits (89), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 52/110 (47%), Gaps = 1/110 (0%)

Query: 235  GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
            G ++  G N  GQLG  +      P     L  +  + Q+A G   + A+T +G VY+ G
Sbjct: 3614 GQIYGWGHNHRGQLGGVEGAKVKVPTVCEALSALRPI-QLAGGEQTLFAITSDGRVYATG 3672

Query: 295  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             G+   LG G       P  +++ +   +  V V++G +H +AL S G V
Sbjct: 3673 YGAGGRLGIGGAESVTVPSLLESLQHVFVKKVAVNSGGKHCLALSSEGEV 3722


>gi|145345400|ref|XP_001417200.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144577427|gb|ABO95493.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 418

 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 76/233 (32%), Positives = 104/233 (44%), Gaps = 28/233 (12%)

Query: 131 VFSCGSSLCGVLGHG----------PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             S G+   G LGHG          P ++    F  +   S   V  V+A   H+ F++ 
Sbjct: 27  ALSAGNGDHGRLGHGSPDEAHDGWSPRSSNY--FHPVEGVSDLDVRAVAAGGAHSVFLVA 84

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            G VFTCG N+    GH     P F P  +     V    V AG   T  + + G V   
Sbjct: 85  GGHVFTCGLNADGQLGHS-AGLP-FSPEPMLVRLDVEVVSVAAGNGHTLCVDVDGCVWAF 142

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
           G NT GQLG G+ +D   P+ I  L +   V Q+A G  + LAV  +G VYS+GS ++  
Sbjct: 143 GKNTAGQLGTGN-VDGTIPRKIGALAKEARVAQVACGAEHSLAVADDGRVYSWGSSTDGV 201

Query: 301 LGHGEQ-----------HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           LGHG +             EL PR +++   K   VV V+AG  H   +D  G
Sbjct: 202 LGHGSETWNDGWFYRTARAELAPRLVRSLEDK--KVVAVAAGHMHSACIDDRG 252



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 65/239 (27%), Positives = 101/239 (42%), Gaps = 21/239 (8%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + +  G  HTL +  +  V++ G +  G LG G      +          A V QV+   
Sbjct: 121 VSVAAGNGHTLCVDVDGCVWAFGKNTAGQLGTG-NVDGTIPRKIGALAKEARVAQVACGA 179

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRD----------TNRPIFRPRLVEALKGVPCKQVT 222
            H+  V   G+V++ G ++    GH            T R    PRLV +L+      V 
Sbjct: 180 EHSLAVADDGRVYSWGSSTDGVLGHGSETWNDGWFYRTARAELAPRLVRSLEDKKVVAVA 239

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLG-HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
           AG   +  +  RG+++T G     QLG      D  T  S  P+  +  V +IA G  + 
Sbjct: 240 AGHMHSACIDDRGNLYTWGQGRFNQLGLSAKPSDHETTPS--PVMSLRFVHEIACGGLHS 297

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHD--ELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           LA T  GVV S+G+  +  LGHG   D     P+ I+   R      +++AG +H   +
Sbjct: 298 LANTNAGVV-SWGANQHGELGHGHHSDIKSAVPKPIKMGSRG---WSKLAAGWKHSAGI 352



 Score = 54.3 bits (129), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 73/273 (26%), Positives = 115/273 (42%), Gaps = 35/273 (12%)

Query: 92  RVLRFLQSVEHSSD--IVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGH--GPE 147
           R   +   VE  SD  +   +AG      G +   L++   VF+CG +  G LGH  G  
Sbjct: 53  RSSNYFHPVEGVSDLDVRAVAAG------GAHSVFLVAGGHVFTCGLNADGQLGHSAGLP 106

Query: 148 TTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRP 207
            +      R++      VV V+A   H   V   G V+  G N++   G  + +  I  P
Sbjct: 107 FSPEPMLVRLDV----EVVSVAAGNGHTLCVDVDGCVWAFGKNTAGQLGTGNVDGTI--P 160

Query: 208 RLVEAL-KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLD---------- 255
           R + AL K     QV  G   +  +   G V++ GS+T G LGHG +T +          
Sbjct: 161 RKIGALAKEARVAQVACGAEHSLAVADDGRVYSWGSSTDGVLGHGSETWNDGWFYRTARA 220

Query: 256 RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG--SNFCLGHGEQHDELQPR 313
              P+ +  LE+   VV +AAG  +   +   G +Y++G G  +   L       E  P 
Sbjct: 221 ELAPRLVRSLEDK-KVVAVAAGHMHSACIDDRGNLYTWGQGRFNQLGLSAKPSDHETTPS 279

Query: 314 AIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSL 346
            + + R     V  ++ G  H +A  ++G VS 
Sbjct: 280 PVMSLR----FVHEIACGGLHSLANTNAGVVSW 308


>gi|444915470|ref|ZP_21235602.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444713401|gb|ELW54301.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 852

 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/220 (31%), Positives = 108/220 (49%), Gaps = 18/220 (8%)

Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HTLL+  + +V++ G +  G LG G  T + V    +     + +  V+AS +H
Sbjct: 145 VAVGTQHTLLLRPDGTVWAWGPNDYGQLGDGTTTNRPVP---VQVGGLSGIRAVAASSDH 201

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           +  V   G V+  G NSS   G   TN  +  P  V  L  +  K+V AG  ++  +   
Sbjct: 202 SLAVRDDGTVWAWGINSSGQLGDGTTNDRL-TPVQVAGLSSI--KRVAAGDGYSLAVHGD 258

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA------GPSYMLAVTGNG 288
           G V   G N+ GQLG G T DR TP  +  L EV   V+++A      G +++LAV G+G
Sbjct: 259 GTVWAWGINSSGQLGDGTTTDRLTPGRVKGLSEV---VEVSAAKYSLLGSAHVLAVRGDG 315

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 328
            V+++G+  +  LG G   D L P  +Q     G+  + V
Sbjct: 316 TVWAWGNNGSGQLGDGTTTDRLTP--VQVSELDGVKAIAV 353



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/185 (35%), Positives = 88/185 (47%), Gaps = 20/185 (10%)

Query: 168 VSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
           V+    H   +   G V+  G N     G    TNRP+  P  V  L G+  + V A  +
Sbjct: 145 VAVGTQHTLLLRPDGTVWAWGPNDYGQLGDGTTTNRPV--PVQVGGLSGI--RAVAASSD 200

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
            +  +   G V   G N+ GQLG G T DR TP  +A L    S+ ++AAG  Y LAV G
Sbjct: 201 HSLAVRDDGTVWAWGINSSGQLGDGTTNDRLTPVQVAGLS---SIKRVAAGDGYSLAVHG 257

Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-HVVRVSA------GDEHVVALD 339
           +G V+++G  S+  LG G   D L P      R KG+  VV VSA      G  HV+A+ 
Sbjct: 258 DGTVWAWGINSSGQLGDGTTTDRLTPG-----RVKGLSEVVEVSAAKYSLLGSAHVLAVR 312

Query: 340 SSGYV 344
             G V
Sbjct: 313 GDGTV 317



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 71/245 (28%), Positives = 113/245 (46%), Gaps = 31/245 (12%)

Query: 115 QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE- 172
           ++  G  ++L +  + +V++ G +  G LG G  TT  ++  R+   S   VV+VSA++ 
Sbjct: 244 RVAAGDGYSLAVHGDGTVWAWGINSSGQLGDG-TTTDRLTPGRVKGLS--EVVEVSAAKY 300

Query: 173 -----NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
                 H   V   G V+  G+N S   G   T   +  P  V  L GV  K +  G +F
Sbjct: 301 SLLGSAHVLAVRGDGTVWAWGNNGSGQLGDGTTTDRL-TPVQVSELDGV--KAIAVGNSF 357

Query: 228 -------TGFLTIRGH--VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
                  +  L +RG   V   GSN+ GQLG G T+ R  P  +  L     +  ++A  
Sbjct: 358 PLSNSNGSYSLAVRGDGTVWAWGSNSTGQLGDGTTISRSRPAQVNALS---GITAVSASS 414

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVA 337
            + LA+  +G V+S+G  +N  LG     DE     +   +  G+  VR V+AG+ H V+
Sbjct: 415 DHALAMRDDGTVWSWGKNTNGKLG-----DETTAHRLIPVQVHGLSGVRSVAAGESHSVS 469

Query: 338 LDSSG 342
           +   G
Sbjct: 470 VREDG 474



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 65/222 (29%), Positives = 101/222 (45%), Gaps = 17/222 (7%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S+ +V++ G +  G LG G    +    T        H+V V+ S  H+  +   G V
Sbjct: 618 LRSDGTVWAWGLNSVGQLGDGSTINRS---TPGPVGGLVHIVGVATSGGHSLALRNDGTV 674

Query: 185 FTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           +  G N     G    TN+P  +P  V  L GV  K V A +  +  +   G V   G N
Sbjct: 675 WAWGGNHDGQLGDGTTTNQP--KPVQVSGLSGV--KAVAAAIVSSAVVRDNGTVWAWGDN 730

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 303
             GQLG G T DR TP  ++ L     V  +A+G  + LA+  +G V+++G      LG 
Sbjct: 731 YSGQLGDGTTTDRLTPVLVSGLS---GVKALASGNHHFLALRNDGTVWAWGDNYYSQLGD 787

Query: 304 GEQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYV 344
           G +     P  +     +G+  V+ ++AG+ H +A+   G V
Sbjct: 788 GTRTQRSTPVQV-----RGLSDVKLIAAGENHSMAVRKDGTV 824



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 60/190 (31%), Positives = 93/190 (48%), Gaps = 13/190 (6%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           T+G +   L ++ +V++ G +  G LG G  T Q      +     + V  V+A+   +A
Sbjct: 660 TSGGHSLALRNDGTVWAWGGNHDGQLGDGTTTNQP---KPVQVSGLSGVKAVAAAIVSSA 716

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR-- 234
            V  +G V+  GDN S   G   T   +  P LV  L GV  K + +G +   FL +R  
Sbjct: 717 VVRDNGTVWAWGDNYSGQLGDGTTTDRL-TPVLVSGLSGV--KALASGNHH--FLALRND 771

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G V   G N + QLG G    R TP  +  L +V     IAAG ++ +AV  +G V+++G
Sbjct: 772 GTVWAWGDNYYSQLGDGTRTQRSTPVQVRGLSDV---KLIAAGENHSMAVRKDGTVWTWG 828

Query: 295 SGSNFCLGHG 304
             ++  LG+G
Sbjct: 829 LNTSGQLGNG 838



 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 73/278 (26%), Positives = 109/278 (39%), Gaps = 65/278 (23%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           + G Y   +  + +V++ GS+  G LG G   ++     ++N  S   +  VSAS +HA 
Sbjct: 362 SNGSYSLAVRGDGTVWAWGSNSTGQLGDGTTISRSRP-AQVNALSG--ITAVSASSDHAL 418

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG------------ 224
            +   G V++ G N++   G   T   +  P  V  L GV  + V AG            
Sbjct: 419 AMRDDGTVWSWGKNTNGKLGDETTAHRLI-PVQVHGLSGV--RSVAAGESHSVSVREDGK 475

Query: 225 --------------------------LNFTGFLTIRGH------------VHTCGSNTHG 246
                                     +  T    I  H            +   GS++ G
Sbjct: 476 AWAWGYRGMGLLGDGAMFLSFVPVQTMGLTATAQIASHGNRSLAVKEDNTLWVWGSSSLG 535

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
            LG G T   P P SI  L++V +V   AAG  Y LAV  NG ++++GS S   LG G  
Sbjct: 536 DLGDGSTGAHPVPSSI--LDDVKAV---AAGNDYSLAVRNNGSLWAWGSNSIGQLGDGST 590

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            + L P  +        +VV  +A     +AL S G V
Sbjct: 591 TNRLTPVPVNGLE----NVVGAAASFSVSLALRSDGTV 624



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 62/227 (27%), Positives = 103/227 (45%), Gaps = 18/227 (7%)

Query: 100 VEHSSDIVETSAGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRIN 158
           V+  S++VE SA    +  G  H L +  + +V++ G++  G LG G  TT  ++  +++
Sbjct: 286 VKGLSEVVEVSAAKYSL-LGSAHVLAVRGDGTVWAWGNNGSGQLGDG-TTTDRLTPVQVS 343

Query: 159 FPSAAHVVQV-------SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE 211
                  + V       +++ +++  V   G V+  G NS+   G   T     RP  V 
Sbjct: 344 ELDGVKAIAVGNSFPLSNSNGSYSLAVRGDGTVWAWGSNSTGQLGD-GTTISRSRPAQVN 402

Query: 212 ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV 271
           AL G+    V+A  +    +   G V + G NT+G+LG   T  R  P  +  L  V SV
Sbjct: 403 ALSGITA--VSASSDHALAMRDDGTVWSWGKNTNGKLGDETTAHRLIPVQVHGLSGVRSV 460

Query: 272 VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 318
              AAG S+ ++V  +G  +++G      LG G       P  +QT 
Sbjct: 461 ---AAGESHSVSVREDGKAWAWGYRGMGLLGDGAMFLSFVP--VQTM 502


>gi|354477676|ref|XP_003501045.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Cricetulus griseus]
          Length = 1049

 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 74/250 (29%), Positives = 114/250 (45%), Gaps = 6/250 (2%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFT 155
           +S +    +V   A N+  ++ G  HTL +++   V+S G    G LG            
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGLLGSEEYIRVPR 129

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
            I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L G
Sbjct: 130 NIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLG 189

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
           +P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V I 
Sbjct: 190 IPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYIC 248

Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
            G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +V+ G +H 
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHT 306

Query: 336 VA-LDSSGYV 344
            A + SSG +
Sbjct: 307 SAFVPSSGRI 316



 Score = 81.3 bits (199), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 108/226 (47%), Gaps = 7/226 (3%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV++ G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYSWGLDSDGQLGLLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGV 263



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   I        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V Q+A G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 98/213 (46%), Gaps = 9/213 (4%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F +   V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V++ G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G +   +  
Sbjct: 122 EEYIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           P+ I++    GI  ++V+AG  H   L  SG +
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAI 211


>gi|432889733|ref|XP_004075335.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Oryzias
           latipes]
          Length = 527

 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 100/218 (45%), Gaps = 4/218 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  VF+ G++  G LG G +    +   RI+      +V +S  +  H       G+VF 
Sbjct: 40  NDEVFALGTNCSGCLGLG-DLQSTIEPRRIDVLCGKKIVSLSYGTGPHVVIATADGEVFA 98

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N     G+  TN  +    +   L G    +V  G + T  LT  G V   G N  G
Sbjct: 99  WGHNGYSQLGNGTTNHGLTPALVSTNLLGKRVTEVACGSHHTIALTADGEVFAWGYNNSG 158

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T ++PTP+ ++   +   VV +  G    +AV  NG +Y +G   N  LG G  
Sbjct: 159 QVGSGSTANQPTPRRVSSCLQSKVVVNVGCGQLCSMAVLDNGEIYGWGYNCNGQLGLGNN 218

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            ++  P  I     +G++VV+V+ G  H +AL   G+V
Sbjct: 219 GNQQTPCRIAAL--QGVNVVQVACGYAHTLALTDEGFV 254



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 103/213 (48%), Gaps = 11/213 (5%)

Query: 118 TGRYHTLLISNSSVFSCGSSLCGVLGHGPE----TTQCVSFTRINFPSAAHVVQVSASEN 173
           TG +  +  ++  VF+ G +    LG+G      T   VS   +       V +V+   +
Sbjct: 83  TGPHVVIATADGEVFAWGHNGYSQLGNGTTNHGLTPALVSTNLL----GKRVTEVACGSH 138

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           H   +   G+VF  G N+S   G   T N+P  R R+   L+      V  G   +  + 
Sbjct: 139 HTIALTADGEVFAWGYNNSGQVGSGSTANQPTPR-RVSSCLQSKVVVNVGCGQLCSMAVL 197

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G ++  G N +GQLG G+  ++ TP  IA L+ V +VVQ+A G ++ LA+T  G VY+
Sbjct: 198 DNGEIYGWGYNCNGQLGLGNNGNQQTPCRIAALQGV-NVVQVACGYAHTLALTDEGFVYA 256

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
           +G+ S   LG G + ++  P  I T + + + V
Sbjct: 257 WGANSYGQLGTGNKSNQALPTLINTDKERMVEV 289


>gi|354477678|ref|XP_003501046.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Cricetulus griseus]
          Length = 1057

 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 74/250 (29%), Positives = 114/250 (45%), Gaps = 6/250 (2%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFT 155
           +S +    +V   A N+  ++ G  HTL +++   V+S G    G LG            
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGLLGSEEYIRVPR 129

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
            I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L G
Sbjct: 130 NIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLG 189

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
           +P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V I 
Sbjct: 190 IPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYIC 248

Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
            G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +V+ G +H 
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHT 306

Query: 336 VA-LDSSGYV 344
            A + SSG +
Sbjct: 307 SAFVPSSGRI 316



 Score = 81.3 bits (199), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 108/226 (47%), Gaps = 7/226 (3%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV++ G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYSWGLDSDGQLGLLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGV 263



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   I        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V Q+A G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 98/213 (46%), Gaps = 9/213 (4%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F +   V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V++ G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G +   +  
Sbjct: 122 EEYIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           P+ I++    GI  ++V+AG  H   L  SG +
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAI 211


>gi|224062918|ref|XP_002300931.1| predicted protein [Populus trichocarpa]
 gi|222842657|gb|EEE80204.1| predicted protein [Populus trichocarpa]
          Length = 1114

 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 72/243 (29%), Positives = 113/243 (46%), Gaps = 19/243 (7%)

Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           +T G +HT L+ S   +F+ G    GVLGHG    + +++ + +   +    + V+    
Sbjct: 392 VTCGPWHTALVTSTGQLFTFGDGTFGVLGHG--NRENIAYPKEVESLAGLRTIAVACGVW 449

Query: 174 HAAFVLQ-----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           H A V++           SG++FT GD      GH D   P  +P  V AL      ++ 
Sbjct: 450 HTAAVVEVIVTQSSSSVSSGKLFTWGDGDKNRLGHGD-KEPRLKPTCVPALIDFNFHKIA 508

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
            G + T  LT  GHV T GS  +GQLG+    D   P  +       SV +IA G  ++ 
Sbjct: 509 CGHSLTVGLTTSGHVFTMGSTVYGQLGN-PYADGKVPCLVEDKLSGESVEEIACGAYHVA 567

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            +T    VY++G G+N  LGHG+  D   P  ++  + K  HV  ++ G  +  A+    
Sbjct: 568 VLTSRNEVYTWGKGANGRLGHGDGEDRKTPTLVEALKDK--HVKYIACGANYSAAICLHK 625

Query: 343 YVS 345
           +VS
Sbjct: 626 WVS 628



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 55/168 (32%), Positives = 86/168 (51%), Gaps = 7/168 (4%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           HAA V + G+VFT G+ S    GH    + + +PRLVE+L       +  G   T  +T+
Sbjct: 291 HAAMVTRQGEVFTWGEESGGRLGH-GVGKDVIQPRLVESLAMTTVDFIACGEFHTCAVTM 349

Query: 234 RGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            G ++T G   H  G LGHG  +    PK I+ PLE +  V  +  GP +   VT  G +
Sbjct: 350 AGEIYTWGDGMHYAGLLGHGTDISHWIPKRISGPLEGL-QVASVTCGPWHTALVTSTGQL 408

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           ++FG G+   LGHG + +   P+ +++    G+  + V+ G  H  A+
Sbjct: 409 FTFGDGTFGVLGHGNRENIAYPKEVESL--AGLRTIAVACGVWHTAAV 454



 Score = 71.6 bits (174), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 61/245 (24%), Positives = 104/245 (42%), Gaps = 31/245 (12%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSASE 172
           R+  ++     VF+ G    G LGHG       P   + ++ T ++F        ++  E
Sbjct: 290 RHAAMVTRQGEVFTWGEESGGRLGHGVGKDVIQPRLVESLAMTTVDF--------IACGE 341

Query: 173 NHAAFVLQSGQVFTCGDNSSFC--CGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            H   V  +G+++T GD   +    GH          R+   L+G+    VT G   T  
Sbjct: 342 FHTCAVTMAGEIYTWGDGMHYAGLLGHGTDISHWIPKRISGPLEGLQVASVTCGPWHTAL 401

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT----- 285
           +T  G + T G  T G LGHG+  +   PK +  L  + ++  +A G  +  AV      
Sbjct: 402 VTSTGQLFTFGDGTFGVLGHGNRENIAYPKEVESLAGLRTIA-VACGVWHTAAVVEVIVT 460

Query: 286 ------GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
                  +G ++++G G    LGHG++   L+P  +        H  +++ G    V L 
Sbjct: 461 QSSSSVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDFNFH--KIACGHSLTVGLT 518

Query: 340 SSGYV 344
           +SG+V
Sbjct: 519 TSGHV 523



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 69/147 (46%), Gaps = 4/147 (2%)

Query: 200 TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP 259
           T   +  PR +E+   +    +  G      +T +G V T G  + G+LGHG   D   P
Sbjct: 264 TRADVLLPRPLESNVVLDVHHIACGFRHAAMVTRQGEVFTWGEESGGRLGHGVGKDVIQP 323

Query: 260 KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQT 317
           + +  L  + +V  IA G  +  AVT  G +Y++G G ++   LGHG       P+ I +
Sbjct: 324 RLVESL-AMTTVDFIACGEFHTCAVTMAGEIYTWGDGMHYAGLLGHGTDISHWIPKRI-S 381

Query: 318 FRRKGIHVVRVSAGDEHVVALDSSGYV 344
              +G+ V  V+ G  H   + S+G +
Sbjct: 382 GPLEGLQVASVTCGPWHTALVTSTGQL 408


>gi|297673959|ref|XP_002815008.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 3
           [Pongo abelii]
          Length = 932

 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/181 (33%), Positives = 90/181 (49%), Gaps = 4/181 (2%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           ++QVS    H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG
Sbjct: 21  ILQVSCGNWHCLALASDGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAG 80

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
              +  L++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +
Sbjct: 81  GAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVL 139

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGY 343
           T +G V++FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG 
Sbjct: 140 TKSGGVFTFGAGSYGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGL 197

Query: 344 V 344
           +
Sbjct: 198 I 198



 Score = 75.1 bits (183), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 65/194 (33%), Positives = 96/194 (49%), Gaps = 6/194 (3%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++ G +H L L S+   F+ G +  G LG G E     S  R+       + QV+A  
Sbjct: 22  LQVSCGNWHCLALASDGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGG 81

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG VF  G N++   G  D  +    P  V+ L+      ++ G   T  LT
Sbjct: 82  AHSFALSLSGAVFGWGMNNAGQLGLSD-EKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 140

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGNGVV 290
             G V T G+ ++GQLGH    D   P+ +  LE +GS V QIA G  + LA V  +G++
Sbjct: 141 KSGGVFTFGAGSYGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLI 198

Query: 291 YSFGSGSNFCLGHG 304
           Y+FG G+   LG G
Sbjct: 199 YAFGCGARGQLGTG 212



 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 69/137 (50%), Gaps = 4/137 (2%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPL 265
           PRL++ L      QV+ G      L   G   T G N+HGQLG G     + +P+ +  L
Sbjct: 10  PRLIQKLNQQTILQVSCGNWHCLALASDGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL 69

Query: 266 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
           E +  + Q+AAG ++  A++ +G V+ +G  +   LG  ++ D   P  ++  R +   V
Sbjct: 70  EGI-PLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ--KV 126

Query: 326 VRVSAGDEHVVALDSSG 342
           V +S G+EH   L  SG
Sbjct: 127 VYISCGEEHTAVLTKSG 143


>gi|428166718|gb|EKX35689.1| hypothetical protein GUITHDRAFT_57398, partial [Guillardia theta
           CCMP2712]
          Length = 257

 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/233 (29%), Positives = 110/233 (47%), Gaps = 9/233 (3%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH-VVQVSASENHAAF 177
           G++  L+  +  + + G+S  G  GH  +T +     R+      H V+QV+  E+H   
Sbjct: 5   GQHSALITKDGELVTWGNSDRGQCGH--DTFRSSQVPRLIRSLREHYVMQVACGESHTLI 62

Query: 178 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
           +  + QV +CG  +    GH D       PR++ AL  +P  Q+ AG N +  +   G  
Sbjct: 63  LTSTSQVLSCGLAAYGALGHGD-GEDCCTPRVIGALWSLPVVQIAAGENHSAAVVSTGEA 121

Query: 238 HTCGSNTHGQLG---HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           H  G N HGQLG    G   +    +    +    +V  +A G ++ + +  +  VYS G
Sbjct: 122 HMWGLNKHGQLGLRAEGGRGEISMAEINQAMLSTLNVKLVACGGNHSVFLCSDLKVYSCG 181

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSLC 347
            GS   LGHG + DE +PR ++    +   +  VS G EH +  DSSG + +C
Sbjct: 182 MGSKGQLGHGSRRDEHRPRRVERLEEQ--EISEVSCGYEHTLFRDSSGVLFVC 232



 Score = 81.3 bits (199), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 69/207 (33%), Positives = 99/207 (47%), Gaps = 7/207 (3%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           MQ+  G  HTL++ S S V SCG +  G LGHG +   C +   I    +  VVQ++A E
Sbjct: 51  MQVACGESHTLILTSTSQVLSCGLAAYGALGHG-DGEDCCTPRVIGALWSLPVVQIAAGE 109

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNR--PIFRPRLVEA-LKGVPCKQVTAGLNFTG 229
           NH+A V+ +G+    G N     G R       I    + +A L  +  K V  G N + 
Sbjct: 110 NHSAAVVSTGEAHMWGLNKHGQLGLRAEGGRGEISMAEINQAMLSTLNVKLVACGGNHSV 169

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
           FL     V++CG  + GQLGHG   D   P+ +  LEE   + +++ G  + L    +GV
Sbjct: 170 FLCSDLKVYSCGMGSKGQLGHGSRRDEHRPRRVERLEEQ-EISEVSCGYEHTLFRDSSGV 228

Query: 290 VYSFGSGSNFCLGHGEQHDE-LQPRAI 315
           ++  GS     L  G  H E L P  I
Sbjct: 229 LFVCGSNEYGQLFLGSDHQEALTPVEI 255



 Score = 72.4 bits (176), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 60/182 (32%), Positives = 86/182 (47%), Gaps = 4/182 (2%)

Query: 168 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
           V+    H+A + + G++ T G++    CGH DT R    PRL+ +L+     QV  G + 
Sbjct: 1   VACGGQHSALITKDGELVTWGNSDRGQCGH-DTFRSSQVPRLIRSLREHYVMQVACGESH 59

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           T  LT    V +CG   +G LGHGD  D  TP+ I  L  +  VVQIAAG ++  AV   
Sbjct: 60  TLILTSTSQVLSCGLAAYGALGHGDGEDCCTPRVIGALWSL-PVVQIAAGENHSAAVVST 118

Query: 288 GVVYSFGSGSNFCLGHGEQ--HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVS 345
           G  + +G   +  LG   +    E+    I       ++V  V+ G  H V L S   V 
Sbjct: 119 GEAHMWGLNKHGQLGLRAEGGRGEISMAEINQAMLSTLNVKLVACGGNHSVFLCSDLKVY 178

Query: 346 LC 347
            C
Sbjct: 179 SC 180


>gi|440904418|gb|ELR54938.1| E3 ISG15--protein ligase HERC5, partial [Bos grunniens mutus]
          Length = 1009

 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 74/230 (32%), Positives = 109/230 (47%), Gaps = 11/230 (4%)

Query: 92  RVLRFLQSVEHSS-DIVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETT 149
           +   +  S+EH+    +      +QIT G YH+L +S    +F+ G +L G LG G    
Sbjct: 102 KPFEYKYSIEHARFQCILQEKNIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFA 161

Query: 150 QCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR--P 207
              +   +   S   +VQ+SA E H+  +  SG V++ G N    CG         +  P
Sbjct: 162 STSTPEIVENLSGVPLVQISAGEAHSMALSMSGNVYSWGRND---CGQLGLGHTYNKDSP 218

Query: 208 RLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE 267
             +E L     + +  G   T  LT  G V T G   +GQLGH  T +   P+ +  L  
Sbjct: 219 SCIETLDDQKVEFLACGGCHTALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGL-- 276

Query: 268 VGS-VVQIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAI 315
           VG+ V QIA G  + LA V+  G V+SFGSG    LG+G   ++L PR +
Sbjct: 277 VGNRVTQIACGRQHTLAYVSDTGKVFSFGSGKEGQLGNGGTRNQLIPRPM 326



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/174 (29%), Positives = 92/174 (52%), Gaps = 3/174 (1%)

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
           +++Q++  + H+  + + G++F  G N     G          P +VE L GVP  Q++A
Sbjct: 123 NIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISA 182

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G   +  L++ G+V++ G N  GQLG G T ++ +P  I  L++   V  +A G  +   
Sbjct: 183 GEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKDSPSCIETLDD-QKVEFLACGGCHTAL 241

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           +T +G+V++FG G    LGH    +EL+PR +      G  V +++ G +H +A
Sbjct: 242 LTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGL--VGNRVTQIACGRQHTLA 293


>gi|356567509|ref|XP_003551961.1| PREDICTED: uncharacterized protein LOC100791947 [Glycine max]
          Length = 1106

 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/178 (33%), Positives = 95/178 (53%), Gaps = 9/178 (5%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHR-DTNRPIFRPRLVEALKGVPCKQVTA 223
           V  ++    HAA V + G+VF+ G+ S    GH  D++ P   P+L+E+L     + V  
Sbjct: 314 VQNIACGGKHAALVTKQGEVFSWGEESGGRLGHGVDSDVP--HPKLIESLSNTNIELVAC 371

Query: 224 GLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSY 280
           G   T  +T+ G ++T G  T+  G LGHG+ +    PK +  PLE +  V  I+ GP +
Sbjct: 372 GEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWVPKRVNGPLEGI-HVSSISCGPWH 430

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
              VT +G +++FG G+   LGHG++     PR I++   KG+  V+ + G  H  A+
Sbjct: 431 TAVVTSSGQLFTFGDGTFGALGHGDRKSVSLPREIESL--KGLRTVQAACGVWHTAAV 486



 Score = 80.9 bits (198), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 114/258 (44%), Gaps = 23/258 (8%)

Query: 100 VEHSSDIVETSAGNMQITT-GRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFT 155
           V H   I   S  N+++   G YHT  ++ S     +  G+   G+LGHG + +  V   
Sbjct: 352 VPHPKLIESLSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWVP-K 410

Query: 156 RINFP-SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK 214
           R+N P    HV  +S    H A V  SGQ+FT GD +    GH D  + +  PR +E+LK
Sbjct: 411 RVNGPLEGIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGALGHGD-RKSVSLPREIESLK 469

Query: 215 GVPCKQVTAGLNFTGFLT------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           G+   Q   G+  T  +               G + T G    G+LGHGD   +  P  +
Sbjct: 470 GLRTVQAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKESKLVPTCV 529

Query: 263 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
             L E     Q+A G S  +A++ +G VY+ GS     LG+ +   +L  R      +  
Sbjct: 530 VTLVEPN--CQVACGHSMTVALSRSGHVYTMGSCVYGQLGNTQADGKLPIRVEGKLSKS- 586

Query: 323 IHVVRVSAGDEHVVALDS 340
             V  ++ G  HV  L S
Sbjct: 587 -FVEEIACGAYHVAVLTS 603



 Score = 75.5 bits (184), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 103/225 (45%), Gaps = 19/225 (8%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           I+ G +HT ++++S  +F+ G    G LGHG    + VS  R I        VQ +    
Sbjct: 424 ISCGPWHTAVVTSSGQLFTFGDGTFGALGHGDR--KSVSLPREIESLKGLRTVQAACGVW 481

Query: 174 HAAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
           H A V++            SG++FT GD      GH D    +  P  V  L    C QV
Sbjct: 482 HTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKESKLV-PTCVVTLVEPNC-QV 539

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
             G + T  L+  GHV+T GS  +GQLG+    D   P  +        V +IA G  ++
Sbjct: 540 ACGHSMTVALSRSGHVYTMGSCVYGQLGNTQA-DGKLPIRVEGKLSKSFVEEIACGAYHV 598

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
             +T    V+++G G+N  LGHG+ +D   P  ++  + K +  +
Sbjct: 599 AVLTSRTEVFTWGKGANGRLGHGDTNDRNTPTLVEALKDKQVKSI 643



 Score = 71.6 bits (174), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 69/247 (27%), Positives = 103/247 (41%), Gaps = 33/247 (13%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSAS 171
           G++  L+     VFS G    G LGHG       P+  + +S T I          V+  
Sbjct: 321 GKHAALVTKQGEVFSWGEESGGRLGHGVDSDVPHPKLIESLSNTNIEL--------VACG 372

Query: 172 ENHAAFVLQSGQVFTCGDNSSF--CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
           E H   V  SG ++T GD +      GH +        R+   L+G+    ++ G   T 
Sbjct: 373 EYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWVPKRVNGPLEGIHVSSISCGPWHTA 432

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT---- 285
            +T  G + T G  T G LGHGD      P+ I  L+ +   VQ A G  +  AV     
Sbjct: 433 VVTSSGQLFTFGDGTFGALGHGDRKSVSLPREIESLKGL-RTVQAACGVWHTAAVVEVMV 491

Query: 286 --------GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
                    +G ++++G G    LGHG++  +L P  + T         +V+ G    VA
Sbjct: 492 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKESKLVPTCVVTLVEPN---CQVACGHSMTVA 548

Query: 338 LDSSGYV 344
           L  SG+V
Sbjct: 549 LSRSGHV 555



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 71/140 (50%), Gaps = 4/140 (2%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E+   +  + +  G      +T +G V + G  + G+LGHG   D P PK I  L 
Sbjct: 303 PKALESAVVLDVQNIACGGKHAALVTKQGEVFSWGEESGGRLGHGVDSDVPHPKLIESLS 362

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPRAIQTFRRKGIH 324
              ++  +A G  +  AVT +G +Y++G G+ N+  LGHG Q     P+ +     +GIH
Sbjct: 363 NT-NIELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWVPKRVNG-PLEGIH 420

Query: 325 VVRVSAGDEHVVALDSSGYV 344
           V  +S G  H   + SSG +
Sbjct: 421 VSSISCGPWHTAVVTSSGQL 440



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 9/193 (4%)

Query: 94  LRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVS 153
           L+ L++V+ +  +  T+A  +++  G   +   S+  +F+ G    G LGHG + ++ V 
Sbjct: 468 LKGLRTVQAACGVWHTAA-VVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKESKLVP 526

Query: 154 FTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHR--DTNRPIFRPRLVE 211
              +         QV+   +    + +SG V+T G       G+   D   PI   R+  
Sbjct: 527 TCVVTL--VEPNCQVACGHSMTVALSRSGHVYTMGSCVYGQLGNTQADGKLPI---RVEG 581

Query: 212 ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV 271
            L     +++  G      LT R  V T G   +G+LGHGDT DR TP  +  L++   V
Sbjct: 582 KLSKSFVEEIACGAYHVAVLTSRTEVFTWGKGANGRLGHGDTNDRNTPTLVEALKD-KQV 640

Query: 272 VQIAAGPSYMLAV 284
             IA G ++  A+
Sbjct: 641 KSIACGTNFTAAI 653


>gi|387019663|gb|AFJ51949.1| putative E3 ubiquitin-protein ligase HERC4-like [Crotalus
           adamanteus]
          Length = 1052

 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 107/225 (47%), Gaps = 6/225 (2%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLG-HGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           ++ G  HTL +++   V++ G ++ G LG  G E    V    I   S   +VQV+    
Sbjct: 89  VSCGEAHTLALNDKGQVYAWGFAVDGQLGLSGTEEYTRVP-RNIKSLSDIQIVQVACGYF 147

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  + +  +VF+ G N     G     +    P+++++L G+P  Q+ AG   +  LT+
Sbjct: 148 HSLALSKGSEVFSWGQNKYGQLGLGYEYKKQASPQIIKSLLGIPFAQIAAGGAHSFVLTL 207

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V   G N  GQLG  D  DR  P  +  L     +V I+ G  +  A+T  G V++F
Sbjct: 208 SGAVFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYISCGEDHTAALTKEGGVFTF 266

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           G+G    LGH     E+ PR +  F   G  V +++ G +H  A 
Sbjct: 267 GAGGYGQLGHNSTAHEINPRKV--FELMGNIVTQIACGRQHTSAF 309



 Score = 81.3 bits (199), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 98/206 (47%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G +H+L +S  S VFS G +  G LG G E  +  S   I         Q++A  
Sbjct: 140 VQVACGYFHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQASPQIIKSLLGIPFAQIAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG VF  G N     G  D N   + P L+++L+      ++ G + T  LT
Sbjct: 200 AHSFVLTLSGAVFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYISCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +G++V QIA G  +  A V   G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTAHEINPRKV--FELMGNIVTQIACGRQHTSAFVPSTGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGMGTTSNRKSPFPVK 342



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 60/224 (26%), Positives = 104/224 (46%), Gaps = 7/224 (3%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +     ++    A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKRP---EQVGALDAQNIVTVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G       G   T      PR +++L  +   QV  G   +  L+    V +
Sbjct: 101 DKGQVYAWGFAVDGQLGLSGTEEYTRVPRNIKSLSDIQIVQVACGYFHSLALSKGSEVFS 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G +   + +P+ I  L  +    QIAAG ++   +T +G V+ +G    
Sbjct: 161 WGQNKYGQLGLGYEYKKQASPQIIKSLLGI-PFAQIAAGGAHSFVLTLSGAVFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
             LG  +++D   P  +++ R + I  V +S G++H  AL   G
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYISCGEDHTAALTKEG 261



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 66/213 (30%), Positives = 95/213 (44%), Gaps = 9/213 (4%)

Query: 135 GSSLCGVLGHGPETTQCV-SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V    R +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRRCSFFVNKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 253
             GH  + +   RP  V AL       V+ G   T  L  +G V+  G    GQLG   T
Sbjct: 65  QLGHEKSRK---RPEQVGALDAQNIVTVSCGEAHTLALNDKGQVYAWGFAVDGQLGLSGT 121

Query: 254 LDRP-TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
            +    P++I  L ++  +VQ+A G  + LA++    V+S+G      LG G E   +  
Sbjct: 122 EEYTRVPRNIKSLSDI-QIVQVACGYFHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQAS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           P+ I++    GI   +++AG  H   L  SG V
Sbjct: 181 PQIIKSLL--GIPFAQIAAGGAHSFVLTLSGAV 211


>gi|339234781|ref|XP_003378945.1| putative HECT-domain protein [Trichinella spiralis]
 gi|316978479|gb|EFV61464.1| putative HECT-domain protein [Trichinella spiralis]
          Length = 994

 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 73/257 (28%), Positives = 124/257 (48%), Gaps = 17/257 (6%)

Query: 91  KRVLRFLQSVEHSSDIVETSAG--NMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPE 147
           KR     +++    D+ ++  G   + +  G  H + ++N   +FS GS++ G LG   E
Sbjct: 90  KRKPNLYENLHWYIDVKQSFVGIHVISVACGDAHCVALTNDGHLFSWGSNVYGQLG--VE 147

Query: 148 TTQCVS---FTRINFPSAAHVVQVSASENHAAFVLQSGQV---FTCGDNSSFCCGHRDTN 201
               V+   + RI   + A++VQ++   NH+  +  +  V   +   D+     G R++ 
Sbjct: 148 RMNVVAKARYPRIQEINLANIVQIACGSNHSLALESTDGVLHAWGLNDHGQLGIGTRES- 206

Query: 202 RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 261
                P  V  L G+P  Q+ AG + +  LT  G V   G N  GQ+G  +  D   P S
Sbjct: 207 --FIGPTTVNKLMGIPICQLAAGASHSLVLTPSGTVFGWGKNMFGQIGQNEQRDILYP-S 263

Query: 262 IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 321
           +  L     V+++A G  + +AVT  G +++FG+G+   LGHG Q+ EL P+  Q     
Sbjct: 264 LVKLLRTQKVIRLACGEDFSVAVTATGGLFTFGAGTYGQLGHGNQNSELFPK--QVMELM 321

Query: 322 GIHVVRVSAGDEHVVAL 338
           G  V+ V+ G  H +A+
Sbjct: 322 GSVVLDVACGRCHTLAI 338



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 65/236 (27%), Positives = 118/236 (50%), Gaps = 21/236 (8%)

Query: 124 LLISNSSVFSCGSSLCGVLGHGPETTQCV-SFTRI-NFPSAAHVVQVSASENHAAFVLQS 181
           L++ + S+  CG++  G LG G    + V S T + +  +   + Q++   +H+  +L  
Sbjct: 11  LILKSMSLLCCGNTSDGQLGLGGIAEENVRSLTLVESTKNFLKIRQIACGRHHSVMLLDD 70

Query: 182 GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG-VPCKQVTAGLNFTGF---------L 231
           G VF+CG+N  +  GH    R   +P L E L   +  KQ   G++             L
Sbjct: 71  GSVFSCGNNDFYQLGHDGIKR---KPNLYENLHWYIDVKQSFVGIHVISVACGDAHCVAL 127

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV--GSVVQIAAGPSYMLAV-TGNG 288
           T  GH+ + GSN +GQLG  + ++         ++E+   ++VQIA G ++ LA+ + +G
Sbjct: 128 TNDGHLFSWGSNVYGQLG-VERMNVVAKARYPRIQEINLANIVQIACGSNHSLALESTDG 186

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           V++++G   +  LG G +   + P  +   +  GI + +++AG  H + L  SG V
Sbjct: 187 VLHAWGLNDHGQLGIGTRESFIGPTTVN--KLMGIPICQLAAGASHSLVLTPSGTV 240


>gi|158300884|ref|XP_552411.3| AGAP011823-PA [Anopheles gambiae str. PEST]
 gi|157013375|gb|EAL38855.3| AGAP011823-PA [Anopheles gambiae str. PEST]
          Length = 4947

 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 74/235 (31%), Positives = 107/235 (45%), Gaps = 21/235 (8%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSAS 171
            G++   L  +  VFS G    G LGHG       P+  + +   RI          ++  
Sbjct: 3124 GKHAMALTLDGKVFSWGEGEDGKLGHGNRLTLEKPKLIETLRTKRIR--------DIACG 3175

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TG 229
             +H+A +  SG+++T G       GH D N    +P+LV AL+     QV  G     T 
Sbjct: 3176 SSHSAAITSSGELYTWGLGEYGRLGHGD-NCTQLKPKLVTALQDHRVVQVACGSRDAQTL 3234

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             LT  G V + G    G+LG G +     P  +  L  VG V+QI  G  + LA+T  G 
Sbjct: 3235 CLTEDGLVFSWGDGDFGKLGRGGSEGCSIPHQVDRLNGVG-VMQIECGAQFSLALTKAGE 3293

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            V+++G G  + LGHG      +P  IQ  R  G  V+ V+ G  H +A+  SG V
Sbjct: 3294 VWTWGKGDYYRLGHGTDQHVRKPTPIQGLR--GKKVIHVAVGALHCLAVTDSGQV 3346



 Score = 81.6 bits (200), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 57/181 (31%), Positives = 91/181 (50%), Gaps = 6/181 (3%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAG 224
            V V++   H   +   G+VF+ G+      GH   NR  + RP+L+E+L G+    +  G
Sbjct: 4179 VAVNSGGKHCLALSSDGEVFSWGEGEDGKLGH--GNRDSYDRPKLIESLSGIGVVDIACG 4236

Query: 225  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLA 283
               +  +TI+GHV T G   +G+LGHGD+ D+  PK +  L    ++ +   +G +  L 
Sbjct: 4237 SAHSACITIQGHVLTWGKGRYGRLGHGDSEDQLQPKLVEALLGYRAIDIACGSGDAQTLC 4296

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I++    G+ V +V  G +  VAL  SG 
Sbjct: 4297 ITDDDNVWSWGDGDYGKLGRGGSDGCKVPMKIESL--AGLGVTKVECGSQFSVALTRSGS 4354

Query: 344  V 344
            V
Sbjct: 4355 V 4355



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 70/238 (29%), Positives = 107/238 (44%), Gaps = 14/238 (5%)

Query: 113  NMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQV 168
             + + +G  H L L S+  VFS G    G LGHG       S+ R   I   S   VV +
Sbjct: 4178 KVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGHGNRD----SYDRPKLIESLSGIGVVDI 4233

Query: 169  SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
            +    H+A +   G V T G       GH D+   + +P+LVEAL G     +  G    
Sbjct: 4234 ACGSAHSACITIQGHVLTWGKGRYGRLGHGDSEDQL-QPKLVEALLGYRAIDIACGSGDA 4292

Query: 229  GFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
              L I    +V + G   +G+LG G +     P  I  L  +G V ++  G  + +A+T 
Sbjct: 4293 QTLCITDDDNVWSWGDGDYGKLGRGGSDGCKVPMKIESLAGLG-VTKVECGSQFSVALTR 4351

Query: 287  NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            +G VY++G G    LGHG      +P+ +     +G  ++ ++ G  H VA   +G V
Sbjct: 4352 SGSVYTWGKGDYHRLGHGNTDHVRRPKKVAAL--QGKKIISIATGSLHCVACSDAGEV 4407



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/240 (27%), Positives = 112/240 (46%), Gaps = 18/240 (7%)

Query: 114  MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHG-----PETTQCVSFTRINFPSAAHVVQ 167
            + I  G     ++S +  +++CG    G LG G     P   Q    ++         V 
Sbjct: 3064 IHIAGGSKSLFIVSQDGKLYACGEGTNGRLGLGHNNNVPTPKQVPILSQY----VVKKVA 3119

Query: 168  VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR-PIFRPRLVEALKGVPCKQVTAGLN 226
            V +   HA  +   G+VF+ G+      GH   NR  + +P+L+E L+    + +  G +
Sbjct: 3120 VHSGGKHAMALTLDGKVFSWGEGEDGKLGH--GNRLTLEKPKLIETLRTKRIRDIACGSS 3177

Query: 227  FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG--PSYMLAV 284
             +  +T  G ++T G   +G+LGHGD   +  PK +  L++   VVQ+A G   +  L +
Sbjct: 3178 HSAAITSSGELYTWGLGEYGRLGHGDNCTQLKPKLVTALQD-HRVVQVACGSRDAQTLCL 3236

Query: 285  TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            T +G+V+S+G G    LG G       P   Q  R  G+ V+++  G +  +AL  +G V
Sbjct: 3237 TEDGLVFSWGDGDFGKLGRGGSEGCSIPH--QVDRLNGVGVMQIECGAQFSLALTKAGEV 3294



 Score = 75.1 bits (183), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 105/226 (46%), Gaps = 7/226 (3%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           GR+   L S+  V+S GS   G LGHG  + + +  TRI   +   V  V    +++A +
Sbjct: 618 GRHVLALASSGDVYSWGSGDGGRLGHGDTSAKELP-TRIAALADRQVTGVFCGSSYSAAI 676

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL--TIRGH 236
             SG+++T G  +    GH ++    + P LV ALK      V  G      L  T  G 
Sbjct: 677 TASGELYTWGRGTYGRLGHGNSEDK-YVPTLVTALKAHRVVHVALGCGDAHSLCVTEAGL 735

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
               G    G+LG+   +    P  +  L +   VV++ +G  + +A+T  G VY++G G
Sbjct: 736 AFAWGDGDFGKLGNESCVGTSVPVQVD-LPQASCVVKVFSGSQFSVALTREGTVYTWGKG 794

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
               LGHG       P+ +Q    +G  +V ++ G  H +AL +SG
Sbjct: 795 HGGRLGHGNSEHSPVPKMVQAL--EGKKIVDLAVGLAHCLALTASG 838



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 69/225 (30%), Positives = 97/225 (43%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  I++S  +++ G    G LGHG   TQ +    +       VVQV+     
Sbjct: 3172 IACGSSHSAAITSSGELYTWGLGEYGRLGHGDNCTQ-LKPKLVTALQDHRVVQVACGSRD 3230

Query: 175  AAFV--LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A  +   + G VF+ GD      G R  +     P  V+ L GV   Q+  G  F+  LT
Sbjct: 3231 AQTLCLTEDGLVFSWGDGDFGKLG-RGGSEGCSIPHQVDRLNGVGVMQIECGAQFSLALT 3289

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG       P  I  L     V+ +A G  + LAVT +G VY+
Sbjct: 3290 KAGEVWTWGKGDYYRLGHGTDQHVRKPTPIQGLRG-KKVIHVAVGALHCLAVTDSGQVYA 3348

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G G      +P  +      GI V RV+ G  H VA
Sbjct: 3349 WGDNDHGQQGSGNTIVNKKPSLVLGL--DGIFVNRVACGSSHSVA 3391



 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 79/183 (43%), Gaps = 16/183 (8%)

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
            V Q+  +EN    +  SG V       S      + N P         +KG+ C  V  
Sbjct: 564 QVRQIVCAENCVYILTDSGTVLYL----SHAISMTEDNYP-------AQVKGLECTIVQL 612

Query: 224 GLNFTG----FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
             +  G     L   G V++ GS   G+LGHGDT  +  P  IA L +   V  +  G S
Sbjct: 613 AAHCEGRHVLALASSGDVYSWGSGDGGRLGHGDTSAKELPTRIAALADR-QVTGVFCGSS 671

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
           Y  A+T +G +Y++G G+   LGHG   D+  P  +   +   +  V +  GD H + + 
Sbjct: 672 YSAAITASGELYTWGRGTYGRLGHGNSEDKYVPTLVTALKAHRVVHVALGCGDAHSLCVT 731

Query: 340 SSG 342
            +G
Sbjct: 732 EAG 734



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 48/162 (29%), Positives = 76/162 (46%), Gaps = 4/162 (2%)

Query: 184  VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            +F  G N     G  D +R I  P   EAL  +   Q+  G      +T  G ++  G  
Sbjct: 4091 IFGWGHNHRGQLGGLDGSR-IKNPTPCEALSLLRPIQIAGGEQTLYAVTPDGKLYATGYG 4149

Query: 244  THGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
              G+LG G T    TP  +  L+ V    V + +G  + LA++ +G V+S+G G +  LG
Sbjct: 4150 AGGRLGVGGTDSVTTPTLVESLQHVMIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLG 4209

Query: 303  HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            HG +    +P+ I++    GI VV ++ G  H   +   G+V
Sbjct: 4210 HGNRDSYDRPKLIESL--SGIGVVDIACGSAHSACITIQGHV 4249



 Score = 41.2 bits (95), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 64/135 (47%), Gaps = 11/135 (8%)

Query: 119 GRYHTLLISNSSV-FSCGSSLCGVLGHGPETTQCVSFT---RINFPSAAHVVQVSASENH 174
           G  H+L ++ + + F+ G    G LG+      CV  +   +++ P A+ VV+V +    
Sbjct: 723 GDAHSLCVTEAGLAFAWGDGDFGKLGN----ESCVGTSVPVQVDLPQASCVVKVFSGSQF 778

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNR-PIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           +  + + G V+T G       GH ++   P+  P++V+AL+G     +  GL     LT 
Sbjct: 779 SVALTREGTVYTWGKGHGGRLGHGNSEHSPV--PKMVQALEGKKIVDLAVGLAHCLALTA 836

Query: 234 RGHVHTCGSNTHGQL 248
            G ++  G N   Q+
Sbjct: 837 SGELYGWGRNDFQQI 851


>gi|357133876|ref|XP_003568548.1| PREDICTED: uncharacterized protein LOC100838586 [Brachypodium
           distachyon]
          Length = 1090

 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/193 (32%), Positives = 98/193 (50%), Gaps = 9/193 (4%)

Query: 150 QCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHR-DTNRPIFRPR 208
            C+    + F     V  +S    HA  V + G+V++ G+ S    GH  D + P  +P+
Sbjct: 298 DCLLPKPLEFAGRLDVQNISCGGRHATLVTKQGEVYSWGEESGGRLGHGVDCDVP--QPK 355

Query: 209 LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APL 265
           LVEAL  +  + V  G   T  +T+ G ++T G+ T   G LGHG+ +    PK +  PL
Sbjct: 356 LVEALAHMNIELVACGEYHTCAVTLSGDLYTWGNGTFNFGLLGHGNEVSHWMPKRLNGPL 415

Query: 266 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
           E +  V  I+ GP +   VT  G +++FG GS   LGHG++     PR +++   KG+  
Sbjct: 416 EGI-HVSSISCGPWHTAVVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESL--KGLRT 472

Query: 326 VRVSAGDEHVVAL 338
           VR + G  H  A+
Sbjct: 473 VRAACGVWHTAAV 485



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 106/230 (46%), Gaps = 28/230 (12%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           I+ G +HT +++++  +F+ G    GVLGHG    Q +S  R +        V+ +    
Sbjct: 423 ISCGPWHTAVVTSAGQLFTFGDGSFGVLGHG--DRQSLSVPREVESLKGLRTVRAACGVW 480

Query: 174 HAAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
           H A V++            SG++FT GD      GH D +  +  P  V +L      QV
Sbjct: 481 HTAAVVEVMVGNSSTSNCSSGKIFTWGDGDKGRLGHGDKDTRLV-PTCVASLVEPNFCQV 539

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAA 276
             G  FT  LT  GHV+T GS+ +GQLG+      P    + P    G      V +I+ 
Sbjct: 540 ACGHCFTVALTTSGHVYTMGSSVYGQLGN------PQADGMVPARVEGKLHKNFVEEISC 593

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
           G  ++  +T    VY++G G+N  LGHG+  D   P  ++  + K +  V
Sbjct: 594 GAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALKDKQVRSV 643



 Score = 68.2 bits (165), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 68/246 (27%), Positives = 106/246 (43%), Gaps = 30/246 (12%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHG-----PETTQCVSFTRINFPSAAHVVQVSASEN 173
           GR+ TL+     V+S G    G LGHG     P+     +   +N      +  V+  E 
Sbjct: 320 GRHATLVTKQGEVYSWGEESGGRLGHGVDCDVPQPKLVEALAHMN------IELVACGEY 373

Query: 174 HAAFVLQSGQVFTCGDNSSF---CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
           H   V  SG ++T G N +F     GH +        RL   L+G+    ++ G   T  
Sbjct: 374 HTCAVTLSGDLYTWG-NGTFNFGLLGHGNEVSHWMPKRLNGPLEGIHVSSISCGPWHTAV 432

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV----TG 286
           +T  G + T G  + G LGHGD      P+ +  L+ +   V+ A G  +  AV     G
Sbjct: 433 VTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLKGL-RTVRAACGVWHTAAVVEVMVG 491

Query: 287 N--------GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           N        G ++++G G    LGHG++   L P  + +      +  +V+ G    VAL
Sbjct: 492 NSSTSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVASLVEP--NFCQVACGHCFTVAL 549

Query: 339 DSSGYV 344
            +SG+V
Sbjct: 550 TTSGHV 555



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 86/199 (43%), Gaps = 22/199 (11%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQC 151
           R +R    V H++ +VE   GN   +         S+  +F+ G    G LGHG + T+ 
Sbjct: 471 RTVRAACGVWHTAAVVEVMVGNSSTSN-------CSSGKIFTWGDGDKGRLGHGDKDTRL 523

Query: 152 V-----SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR 206
           V     S    NF       QV+        +  SG V+T G +     G+   +  +  
Sbjct: 524 VPTCVASLVEPNF------CQVACGHCFTVALTTSGHVYTMGSSVYGQLGNPQADGMV-- 575

Query: 207 PRLVEA-LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 265
           P  VE  L     ++++ G      LT R  V+T G   +G+LGHGDT DR +P  +  L
Sbjct: 576 PARVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNSPTLVEAL 635

Query: 266 EEVGSVVQIAAGPSYMLAV 284
           ++   V  +  G ++  A+
Sbjct: 636 KD-KQVRSVVCGINFTAAI 653



 Score = 44.3 bits (103), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 38/124 (30%), Positives = 58/124 (46%), Gaps = 3/124 (2%)

Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+  G   T+ ++ S  V++ GSS+ G LG+ P+    V            V ++S    
Sbjct: 538 QVACGHCFTVALTTSGHVYTMGSSVYGQLGN-PQADGMVPARVEGKLHKNFVEEISCGAY 596

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H A +    +V+T G  ++   GH DT+     P LVEALK    + V  G+NFT  + I
Sbjct: 597 HVAVLTSRTEVYTWGKGANGRLGHGDTDD-RNSPTLVEALKDKQVRSVVCGINFTAAICI 655

Query: 234 RGHV 237
              V
Sbjct: 656 HKWV 659


>gi|52345808|ref|NP_001004950.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Xenopus (Silurana) tropicalis]
 gi|49522414|gb|AAH75441.1| MGC89218 protein [Xenopus (Silurana) tropicalis]
          Length = 526

 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 66/219 (30%), Positives = 101/219 (46%), Gaps = 4/219 (1%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQ 183
           L  N  VF  G++  G LG G +    +   RI+  S   +V +S  S  H   V   G+
Sbjct: 36  LTKNDEVFVMGTNSSGCLGTG-DAQSILEPRRIDMLSGKRIVSLSYGSGPHVVIVTSDGE 94

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           V++ G N+    G+  TN+ +   ++   L       V  G + +  LT  G V+  G N
Sbjct: 95  VYSWGHNAYSQLGNGSTNQALSPCQVSTNLINKKAISVACGSHHSMVLTCDGEVYAWGYN 154

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 303
             GQ+G G T ++P P+ +    +  +V+ IA G    +AV  NG VY++G   N  LG 
Sbjct: 155 NSGQVGSGSTANQPIPRKVTSCLQNKTVIGIACGQMSSMAVVDNGEVYAWGYNGNGQLGL 214

Query: 304 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           G   +  QP   +    +GI V +V  G  H +AL   G
Sbjct: 215 GSSGN--QPTPCRIAALQGIRVEQVVCGYAHTLALTDEG 251



 Score = 54.3 bits (129), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 50/202 (24%), Positives = 101/202 (50%), Gaps = 10/202 (4%)

Query: 97  LQSVEHSSDIVETSAGNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFT 155
           L   + S++++   A  + +  G +H+++++ +  V++ G +  G +G G    Q +   
Sbjct: 115 LSPCQVSTNLINKKA--ISVACGSHHSMVLTCDGEVYAWGYNNSGQVGSGSTANQPIPRK 172

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALK 214
             +      V+ ++  +  +  V+ +G+V+  G N +   G   + N+P   P  + AL+
Sbjct: 173 VTSCLQNKTVIGIACGQMSSMAVVDNGEVYAWGYNGNGQLGLGSSGNQPT--PCRIAALQ 230

Query: 215 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 274
           G+  +QV  G   T  LT  G ++  G+N++GQLG G+  ++  P  +   +E   +V+I
Sbjct: 231 GIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQLGTGNKSNQSYPVQVIVDKE--RIVEI 288

Query: 275 AAGPS--YMLAVTGNGVVYSFG 294
           AA  S     A + +G VY +G
Sbjct: 289 AACHSSHTSAAKSQSGQVYMWG 310



 Score = 45.8 bits (107), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 64/145 (44%), Gaps = 7/145 (4%)

Query: 203 PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           PIF     E LK +    V    N   +LT    V   G+N+ G LG GD      P+ I
Sbjct: 8   PIFALCPQEDLKFIQQACVFGAGNEVLYLTKNDEVFVMGTNSSGCLGTGDAQSILEPRRI 67

Query: 263 APLEEVGSV-VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQT--FR 319
             L     V +   +GP +++ VT +G VYS+G  +   LG+G  +  L P  + T    
Sbjct: 68  DMLSGKRIVSLSYGSGP-HVVIVTSDGEVYSWGHNAYSQLGNGSTNQALSPCQVSTNLIN 126

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYV 344
           +K I    V+ G  H + L   G V
Sbjct: 127 KKAI---SVACGSHHSMVLTCDGEV 148


>gi|224085093|ref|XP_002307488.1| predicted protein [Populus trichocarpa]
 gi|222856937|gb|EEE94484.1| predicted protein [Populus trichocarpa]
          Length = 1061

 Score = 85.9 bits (211), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 111/236 (47%), Gaps = 19/236 (8%)

Query: 116 ITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           +T G +HT L+++   +F+ G    GVLGHG    + V++ R +   +    + V+    
Sbjct: 337 VTCGPWHTALVTSMGQLFTFGDGTFGVLGHG--NRENVAYPREVESLAGLRTIAVACGVW 394

Query: 174 HAAFVLQ-----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           H A V++           SG++FT GD      GH D   P   P  V AL      ++ 
Sbjct: 395 HTAAVVEVIVTQSSSSASSGKLFTWGDGDKNRLGHGD-KEPRLEPTCVPALIDYNFHKIA 453

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
            G + T  LT  GHV T GS  +GQLG+    D   P  +       SV +IA G  ++ 
Sbjct: 454 CGHSLTVGLTTAGHVFTMGSTVYGQLGN-PCADGKVPCLVEDKLYGESVEEIACGAYHVA 512

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           A+T    VY++G G+N  LGHG+  D   P  ++  + +  HV  ++ G  +  A+
Sbjct: 513 ALTSRNEVYTWGKGANGRLGHGDGEDRKTPTIVEALKDR--HVKYIACGANYSAAI 566



 Score = 67.8 bits (164), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 106/236 (44%), Gaps = 28/236 (11%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINF----PSAAHVV----QVSASENHAAFVLQSG 182
           V+  G  LC V     + T  +S TR +     P  ++VV     ++    HAA V + G
Sbjct: 239 VYIWGEVLCSVKVGADKNTSYLS-TRADVLLPRPLESNVVLDVHHIACGVRHAAMVTRQG 297

Query: 183 QVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
           +VFT G+ S    GH   +D  +P    R+   L+G+    VT G   T  +T  G + T
Sbjct: 298 EVFTWGEESGGRLGHGAGKDVIQPCL--RISGPLEGLQVASVTCGPWHTALVTSMGQLFT 355

Query: 240 CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT-----------GNG 288
            G  T G LGHG+  +   P+ +  L  + ++  +A G  +  AV             +G
Sbjct: 356 FGDGTFGVLGHGNRENVAYPREVESLAGLRTIA-VACGVWHTAAVVEVIVTQSSSSASSG 414

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            ++++G G    LGHG++   L+P  +        H  +++ G    V L ++G+V
Sbjct: 415 KLFTWGDGDKNRLGHGDKEPRLEPTCVPALIDYNFH--KIACGHSLTVGLTTAGHV 468


>gi|39104479|dbj|BAC65474.3| mKIAA0032 protein [Mus musculus]
          Length = 938

 Score = 85.9 bits (211), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 62/181 (34%), Positives = 90/181 (49%), Gaps = 4/181 (2%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           ++QVS    H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG
Sbjct: 29  ILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAG 88

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
              +  L++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +
Sbjct: 89  GAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVL 147

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGY 343
           T +G V++FG+GS   LGH   +DE+ PR +      G  V +++ G +H +AL  SSG 
Sbjct: 148 TKSGGVFTFGAGSCGQLGHDSVNDEVNPRRV--LELMGSEVTQIACGRQHTLALVPSSGL 205

Query: 344 V 344
           +
Sbjct: 206 I 206



 Score = 72.0 bits (175), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 64/194 (32%), Positives = 95/194 (48%), Gaps = 6/194 (3%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++ G +H L L ++   F+ G +  G LG G E     S  R+       + QV+A  
Sbjct: 30  LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGG 89

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG VF  G N++   G  D  +    P  V+ L+      ++ G   T  LT
Sbjct: 90  AHSFALSLSGAVFGWGMNNAGQLGLSD-EKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 148

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGNGVV 290
             G V T G+ + GQLGH    D   P+ +  LE +GS V QIA G  + LA V  +G++
Sbjct: 149 KSGGVFTFGAGSCGQLGHDSVNDEVNPRRV--LELMGSEVTQIACGRQHTLALVPSSGLI 206

Query: 291 YSFGSGSNFCLGHG 304
           Y+FG G+   LG G
Sbjct: 207 YAFGCGAKGQLGTG 220



 Score = 64.3 bits (155), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 71/148 (47%), Gaps = 4/148 (2%)

Query: 196 GHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD 255
           G   T   +  PRL++ L      QV+ G      L   G   T G N+HGQLG G    
Sbjct: 7   GLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP 66

Query: 256 RPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRA 314
             T P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +   LG  ++ D   P  
Sbjct: 67  SQTSPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCH 125

Query: 315 IQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           ++  R +   VV +S G+EH   L  SG
Sbjct: 126 VKLLRTQ--KVVYISCGEEHTAVLTKSG 151


>gi|338533363|ref|YP_004666697.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
 gi|337259459|gb|AEI65619.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
          Length = 1379

 Score = 85.9 bits (211), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 75/237 (31%), Positives = 109/237 (45%), Gaps = 14/237 (5%)

Query: 107 VETSAGNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV 165
           V+   G   I  G YHT+  S + +V++ G +  G LG G   T    F+ +       V
Sbjct: 117 VQVMTGATAIAAGIYHTVAASQDGTVWTWGRNSSGQLGDG---TSIQRFSPVQVQGLTGV 173

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
             V+A  NH+A + Q G V+T GDN     G   T+     P  V+ L GV    ++A  
Sbjct: 174 TAVAAGRNHSAALGQGGTVWTWGDNLVGQLGD-GTSTQRLTPVQVQGLTGVIA--ISAND 230

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
           + T  L   G V   G+N+ GQLG G T  R TP  +  L     V  IAAG  + +A+ 
Sbjct: 231 SETVALRQDGTVWAWGNNSSGQLGDGTTTVRFTPVQVLGLT---GVTAIAAGGGFAVALR 287

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            +G ++++GS S   LG+G      +P  +Q        V  ++A   H VAL   G
Sbjct: 288 QDGTLWAWGSNSRGQLGNGTTFGSYRPEQVQGL----TGVTAIAASGIHTVALRQDG 340



 Score = 78.6 bits (192), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 84/304 (27%), Positives = 129/304 (42%), Gaps = 22/304 (7%)

Query: 45   SHGLYPQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCN--GNWKRVLRFLQ-SVE 101
            S+ L P + + L+D+ A      H   AG    +    LN     G      R L   V+
Sbjct: 913  SYRLLPVQVQGLMDVTAMAAGGYHMAAAGQDGTLWTWGLNSYGQLGGGPLSYRLLPVQVQ 972

Query: 102  HSSDIVETSAGNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP 160
                +   +AG        YH      + ++++ G +  G LG GP  +Q ++  ++   
Sbjct: 973  GLMSVTAMAAGG-------YHMAAAGQDGTLWTWGLNSYGQLGGGP-LSQSLTPVQVQVQ 1024

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
                V  ++A  +H   V Q G V++ G N+    G   T + +  P  V+ L GV    
Sbjct: 1025 GLTGVAAIAAGFSHTLAVRQDGTVWSWGGNAYGQLGDGTTAQSL-TPVQVQGLTGVTA-- 1081

Query: 221  VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
            ++AG   T  L   G V   G N+ GQLG G T  R TP  +  L     V+ IAAG  +
Sbjct: 1082 ISAGDAHTVALRRDGTVWAWGRNSWGQLGDGTTTHRATPVQVQGLT---GVIAIAAGSLH 1138

Query: 281  MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
             +A+  +G V+++G  S   LG G       P  +Q        V+ ++AG  H VAL  
Sbjct: 1139 TVALRQDGTVWAWGRNSWGQLGDGTTTHRATPVQVQGL----TGVIAIAAGSLHTVALRQ 1194

Query: 341  SGYV 344
             G V
Sbjct: 1195 DGTV 1198



 Score = 74.3 bits (181), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 107/240 (44%), Gaps = 16/240 (6%)

Query: 107  VETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV 165
            V+   G + I  G  HT+ L  + +V++ G +  G LG G  T +    T +       V
Sbjct: 1123 VQGLTGVIAIAAGSLHTVALRQDGTVWAWGRNSWGQLGDGTTTHRA---TPVQVQGLTGV 1179

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            + ++A   H   + Q G V+  G N     G   T R +  P  V+ L GV    + AG 
Sbjct: 1180 IAIAAGSLHTVALRQDGTVWAWGFNDLGQLGDGTTTRRL-TPAQVQGLTGVTT--IAAGY 1236

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
              T  +   G   T G N  GQLG G   DR TP  +  L  V +   +AAG ++ + V 
Sbjct: 1237 FHTAAVRQDGTAWTWGFNLWGQLGDGTFTDRATPVQVQGLTGVSA---LAAGYAHTVVVG 1293

Query: 286  GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--DSSGY 343
             +G V+++G+ S   LG+G   D   P  ++           ++AG  H VA+  D +G+
Sbjct: 1294 EDGTVWAWGNNSGTQLGNGSSTDRSTPVQVEAL----TGAFSLAAGRFHTVAMSPDGAGW 1349



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 71/222 (31%), Positives = 103/222 (46%), Gaps = 16/222 (7%)

Query: 122 HTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           HTL +  + +V++ G++  G LG G  T +   F+ +   + A  +  +A   H     Q
Sbjct: 84  HTLAVRQDGTVWAWGNNDDGQLGDGTTTRR---FSPVQVMTGATAI--AAGIYHTVAASQ 138

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            G V+T G NSS   G   T+   F P  V+ L GV    V AG N +  L   G V T 
Sbjct: 139 DGTVWTWGRNSSGQLGD-GTSIQRFSPVQVQGLTGVTA--VAAGRNHSAALGQGGTVWTW 195

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
           G N  GQLG G +  R TP  +  L     V+ I+A  S  +A+  +G V+++G+ S+  
Sbjct: 196 GDNLVGQLGDGTSTQRLTPVQVQGLT---GVIAISANDSETVALRQDGTVWAWGNNSSGQ 252

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           LG G       P  +Q     G  V  ++AG    VAL   G
Sbjct: 253 LGDGTTTVRFTP--VQVLGLTG--VTAIAAGGGFAVALRQDG 290



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 61/221 (27%), Positives = 92/221 (41%), Gaps = 21/221 (9%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           + +V++ G +  G LG G  T +    T +       V  ++A   +     Q G V+  
Sbjct: 389 DGTVWAWGDNEWGQLGDGTTTRR---LTPVQVQGLTGVTAIAAGYLYTVASKQDGTVWAW 445

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI----RGHVHTCGSN 243
           GDN     G    ++    P  V+ L+G+        +  +  LT+     G V   G N
Sbjct: 446 GDNKRSQLGEGAVSQR-HTPGEVQGLEGITA------IAASNLLTVAVRQDGTVWAWGDN 498

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 303
             GQLG G T  R TP  +  L     V  +AA   +++AV  +G V+++G G    LG 
Sbjct: 499 ARGQLGDGTTTRRLTPVQVQGLA---GVTAVAASDYHLVAVRQDGTVWAWGVGFWGQLGD 555

Query: 304 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G   D   P  +Q        V  ++AG  H VAL   G V
Sbjct: 556 GTGMDRSTPVQVQGL----TGVTAIAAGSNHTVALRQDGTV 592



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 92/218 (42%), Gaps = 25/218 (11%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSAS 171
           G +   L  + ++++ GS+  G LG+G       PE  Q ++           V  ++AS
Sbjct: 280 GGFAVALRQDGTLWAWGSNSRGQLGNGTTFGSYRPEQVQGLT----------GVTAIAAS 329

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   + Q G ++  G+NSS   G   T    F P  V+ L GV    + AG  +T   
Sbjct: 330 GIHTVALRQDGTLWAWGNNSSGQLGD-GTTTVRFTPVQVQGLTGVTA--IAAGYLYTVAS 386

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
              G V   G N  GQLG G T  R TP  +  L     V  IAAG  Y +A   +G V+
Sbjct: 387 KQDGTVWAWGDNEWGQLGDGTTTRRLTPVQVQGLT---GVTAIAAGYLYTVASKQDGTVW 443

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
           ++G      LG G       P  +Q    +GI  +  S
Sbjct: 444 AWGDNKRSQLGEGAVSQRHTPGEVQGL--EGITAIAAS 479



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/186 (30%), Positives = 82/186 (44%), Gaps = 12/186 (6%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
           F + A  V  + + NH   V Q G V+  G+N     G   T R  F P  V+ + G   
Sbjct: 69  FAAPAGPVLAAGNGNHTLAVRQDGTVWAWGNNDDGQLGDGTTTRR-FSP--VQVMTGATA 125

Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
             + AG+  T   +  G V T G N+ GQLG G ++ R +P  +  L     V  +AAG 
Sbjct: 126 --IAAGIYHTVAASQDGTVWTWGRNSSGQLGDGTSIQRFSPVQVQGLT---GVTAVAAGR 180

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           ++  A+   G V+++G      LG G     L P  +Q        V+ +SA D   VAL
Sbjct: 181 NHSAALGQGGTVWTWGDNLVGQLGDGTSTQRLTPVQVQGL----TGVIAISANDSETVAL 236

Query: 339 DSSGYV 344
              G V
Sbjct: 237 RQDGTV 242



 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 68/234 (29%), Positives = 102/234 (43%), Gaps = 20/234 (8%)

Query: 116  ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            +  G YH      + ++++ G +  G LG GP + + +    +       V  ++A   H
Sbjct: 880  MAAGGYHMAAAGQDGTLWTWGLNSYGQLGGGPLSYRLLP---VQVQGLMDVTAMAAGGYH 936

Query: 175  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
             A   Q G ++T G NS    G    +  +  P  V+ L  V    + AG          
Sbjct: 937  MAAAGQDGTLWTWGLNSYGQLGGGPLSYRLL-PVQVQGLMSVTA--MAAGGYHMAAAGQD 993

Query: 235  GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE----EVGSVVQIAAGPSYMLAVTGNGVV 290
            G + T G N++GQLG G     P  +S+ P++     +  V  IAAG S+ LAV  +G V
Sbjct: 994  GTLWTWGLNSYGQLGGG-----PLSQSLTPVQVQVQGLTGVAAIAAGFSHTLAVRQDGTV 1048

Query: 291  YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            +S+G  +   LG G     L P  +Q        V  +SAGD H VAL   G V
Sbjct: 1049 WSWGGNAYGQLGDGTTAQSLTPVQVQGL----TGVTAISAGDAHTVALRRDGTV 1098



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 65/217 (29%), Positives = 92/217 (42%), Gaps = 13/217 (5%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           + +V++ G +  G LG G  T +    T +     A V  V+AS+ H   V Q G V+  
Sbjct: 489 DGTVWAWGDNARGQLGDGTTTRR---LTPVQVQGLAGVTAVAASDYHLVAVRQDGTVWAW 545

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G       G   T      P  V+ L GV    + AG N T  L   G V   G N +GQ
Sbjct: 546 GVGFWGQLGD-GTGMDRSTPVQVQGLTGVTA--IAAGSNHTVALRQDGTVWAWGFNNYGQ 602

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 307
           LG G T    TP  +     V   V IAAG S+ +A+  +G V+++G      LG G   
Sbjct: 603 LGDGTTAGHLTPVQV---PGVTGAVAIAAGGSHTVALLQDGTVWTWGYNIWGQLGDGTTT 659

Query: 308 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
               P  +Q        V+ ++  + H VA+   G V
Sbjct: 660 HRHSPVQVQGL----ADVIAIATNNGHTVAVRQDGTV 692



 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 67/237 (28%), Positives = 102/237 (43%), Gaps = 18/237 (7%)

Query: 112 GNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
           G + I  G  HT+ L+ + +V++ G ++ G LG G  T +    + +     A V+ ++ 
Sbjct: 622 GAVAIAAGGSHTVALLQDGTVWTWGYNIWGQLGDGTTTHR---HSPVQVQGLADVIAIAT 678

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR---PIFRPRLVEALKGVPCKQVTAGLNF 227
           +  H   V Q G V+T G NSS   G   T +   P+    L +A   +     T  +  
Sbjct: 679 NNGHTVAVRQDGTVWTWGLNSSGQLGDGTTTQRLTPVQVHGLTDATAILTSSSQTVAMRQ 738

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
              L         G N  GQLG G T  R TP  +  L +V     +AAG  +M A   +
Sbjct: 739 DRTL------WAWGDNHWGQLGDGTTTRRLTPVQVQGLMDV---TAMAAGGYHMAAAGQD 789

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G ++++G  S   LG G     L P  +Q           ++AGD H VA+   G V
Sbjct: 790 GTLWTWGLNSYGQLGGGPLSYRLLPVQVQGLTSA--TATAIAAGDSHTVAVRQDGTV 844



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 89/210 (42%), Gaps = 16/210 (7%)

Query: 107 VETSAGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV 165
           V+  AG   +    YH + +  + +V++ G    G LG G   T     T +       V
Sbjct: 517 VQGLAGVTAVAASDYHLVAVRQDGTVWAWGVGFWGQLGDG---TGMDRSTPVQVQGLTGV 573

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN---RPIFRPRLVEALKGVPCKQVT 222
             ++A  NH   + Q G V+  G N+    G   T     P+  P +  A+       + 
Sbjct: 574 TAIAAGSNHTVALRQDGTVWAWGFNNYGQLGDGTTAGHLTPVQVPGVTGAVA------IA 627

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
           AG + T  L   G V T G N  GQLG G T  R +P  +  L +   V+ IA    + +
Sbjct: 628 AGGSHTVALLQDGTVWTWGYNIWGQLGDGTTTHRHSPVQVQGLAD---VIAIATNNGHTV 684

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQP 312
           AV  +G V+++G  S+  LG G     L P
Sbjct: 685 AVRQDGTVWTWGLNSSGQLGDGTTTQRLTP 714



 Score = 54.7 bits (130), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 12/208 (5%)

Query: 107  VETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV 165
            V+   G + I  G  HT+ L  + +V++ G +  G LG G  T +    T         V
Sbjct: 1173 VQGLTGVIAIAAGSLHTVALRQDGTVWAWGFNDLGQLGDGTTTRR---LTPAQVQGLTGV 1229

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAG 224
              ++A   H A V Q G  +T G N     G    T+R    P  V+ L GV    + AG
Sbjct: 1230 TTIAAGYFHTAAVRQDGTAWTWGFNLWGQLGDGTFTDRAT--PVQVQGLTGVSA--LAAG 1285

Query: 225  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
               T  +   G V   G+N+  QLG+G + DR TP  +   E +     +AAG  + +A+
Sbjct: 1286 YAHTVVVGEDGTVWAWGNNSGTQLGNGSSTDRSTPVQV---EALTGAFSLAAGRFHTVAM 1342

Query: 285  TGNGVVYSFGSGSNFCLGHGEQHDELQP 312
            + +G  + +G  +   +G G   D   P
Sbjct: 1343 SPDGAGWGWGRNNLGQVGDGTTADRPTP 1370



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 68/149 (45%), Gaps = 9/149 (6%)

Query: 116  ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G +HT  +  + + ++ G +L G LG G  T +    T +       V  ++A   H
Sbjct: 1232 IAAGYFHTAAVRQDGTAWTWGFNLWGQLGDGTFTDRA---TPVQVQGLTGVSALAAGYAH 1288

Query: 175  AAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
               V + G V+  G+NS    G+   T+R    P  VEAL G     + AG   T  ++ 
Sbjct: 1289 TVVVGEDGTVWAWGNNSGTQLGNGSSTDRST--PVQVEALTG--AFSLAAGRFHTVAMSP 1344

Query: 234  RGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
             G     G N  GQ+G G T DRPTP ++
Sbjct: 1345 DGAGWGWGRNNLGQVGDGTTADRPTPVNV 1373



 Score = 51.6 bits (122), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 69/243 (28%), Positives = 111/243 (45%), Gaps = 10/243 (4%)

Query: 101 EHSSDIVETSAGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINF 159
            HS   V+  A  + I T   HT+ +  + +V++ G +  G LG G  TTQ ++  +++ 
Sbjct: 661 RHSPVQVQGLADVIAIATNNGHTVAVRQDGTVWTWGLNSSGQLGDG-TTTQRLTPVQVHG 719

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 219
            + A  +  S+S+  A  + Q   ++  GDN     G   T R +  P  V+ L  V   
Sbjct: 720 LTDATAILTSSSQTVA--MRQDRTLWAWGDNHWGQLGDGTTTRRL-TPVQVQGLMDVTA- 775

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
            + AG          G + T G N++GQLG G    R  P  +  L    +   IAAG S
Sbjct: 776 -MAAGGYHMAAAGQDGTLWTWGLNSYGQLGGGPLSYRLLPVQVQGLTSA-TATAIAAGDS 833

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
           + +AV  +G V+++GS  +  LG G     L P  +Q   +  + V  ++AG  H+ A  
Sbjct: 834 HTVAVRQDGTVWAWGSNFSGQLGDGTTAQSLTPVQVQV--QGLMDVTAMAAGGYHMAAAG 891

Query: 340 SSG 342
             G
Sbjct: 892 QDG 894


>gi|344247622|gb|EGW03726.1| putative E3 ubiquitin-protein ligase HERC4 [Cricetulus griseus]
          Length = 835

 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 74/250 (29%), Positives = 114/250 (45%), Gaps = 6/250 (2%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFT 155
           +S +    +V   A N+  ++ G  HTL +++   V+S G    G LG            
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGLLGSEEYIRVPR 129

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
            I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L G
Sbjct: 130 NIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLG 189

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
           +P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V I 
Sbjct: 190 IPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYIC 248

Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
            G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +V+ G +H 
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHT 306

Query: 336 VA-LDSSGYV 344
            A + SSG +
Sbjct: 307 SAFVPSSGRI 316



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 108/226 (47%), Gaps = 7/226 (3%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV++ G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYSWGLDSDGQLGLLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGV 263



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 116/247 (46%), Gaps = 16/247 (6%)

Query: 73  GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSS-V 131
           G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S +S V
Sbjct: 109 GLDSDGQLGLLGS-----EEYIRVPRNIKSLSDI-----QIVQVACGYYHSLALSKASEV 158

Query: 132 FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNS 191
           F  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F  G N 
Sbjct: 159 FCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNK 218

Query: 192 SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG 251
               G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQLGH 
Sbjct: 219 FGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 252 DTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGEQHDE 309
            T     P+ +   E +GS+V Q+A G  +  A V  +G +YSFG G N  LG G   + 
Sbjct: 278 STSHEINPRKV--FELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNR 335

Query: 310 LQPRAIQ 316
             P  ++
Sbjct: 336 KSPFTVK 342



 Score = 64.7 bits (156), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 98/213 (46%), Gaps = 9/213 (4%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F +   V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V++ G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G +   +  
Sbjct: 122 EEYIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           P+ I++    GI  ++V+AG  H   L  SG +
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAI 211


>gi|195385523|ref|XP_002051454.1| GJ15738 [Drosophila virilis]
 gi|194147911|gb|EDW63609.1| GJ15738 [Drosophila virilis]
          Length = 487

 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 62/226 (27%), Positives = 102/226 (45%), Gaps = 27/226 (11%)

Query: 122 HTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           HT+LI+ +      G +  G LG   +       T I      ++VQ +A  +H  F+  
Sbjct: 127 HTILINMDRKALGFGRNPSGQLGLSQDIKLVEKPTIIPALEQLNIVQAAAGRHHTLFLTD 186

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           +G V+ CG+N S  CG  + +  IF P  +   +G P  ++  G  F+  L I+G++HT 
Sbjct: 187 TGTVYACGENKSGQCGVGNAHPNIFTPTPIN-YRGPPIIRIGCGAEFSVILDIKGNLHTF 245

Query: 241 GSNTHGQLGHGDT------------------------LDRPTPKSIAPLEEVGSVVQIAA 276
           G   +GQLGH                           +++     + P++ V  +V  A 
Sbjct: 246 GLPEYGQLGHNTDAKYFVNANKLSFHFETSPKRVVLYIEKSKEGHVTPVDGV-QIVDFAC 304

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           G ++ +A+     VYS+G G    LGH E  DE+ PR ++ F  +G
Sbjct: 305 GNNHTVAIDSKKRVYSWGFGGFGRLGHAEPKDEMVPRLMKFFDAQG 350



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 85/208 (40%), Gaps = 35/208 (16%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 219
           P+AAH + ++       F          G N S   G     + + +P ++ AL+ +   
Sbjct: 123 PTAAHTILINMDRKALGF----------GRNPSGQLGLSQDIKLVEKPTIIPALEQLNIV 172

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGP 278
           Q  AG + T FLT  G V+ CG N  GQ G G+    P   +  P+   G  +++I  G 
Sbjct: 173 QAAAGRHHTLFLTDTGTVYACGENKSGQCGVGNA--HPNIFTPTPINYRGPPIIRIGCGA 230

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQ------------HDELQPRAIQTFRRK----- 321
            + + +   G +++FG      LGH               H E  P+ +  +  K     
Sbjct: 231 EFSVILDIKGNLHTFGLPEYGQLGHNTDAKYFVNANKLSFHFETSPKRVVLYIEKSKEGH 290

Query: 322 -----GIHVVRVSAGDEHVVALDSSGYV 344
                G+ +V  + G+ H VA+DS   V
Sbjct: 291 VTPVDGVQIVDFACGNNHTVAIDSKKRV 318


>gi|357493985|ref|XP_003617281.1| Lateral signaling target protein-like protein [Medicago truncatula]
 gi|355518616|gb|AET00240.1| Lateral signaling target protein-like protein [Medicago truncatula]
          Length = 1124

 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 95/189 (50%), Gaps = 13/189 (6%)

Query: 159 FPSAAHVVQVSASEN------HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA 212
           FP A     V   +N      HAA V + G++F+ G+ S    GH   +  +  P+L++A
Sbjct: 322 FPKALESAVVLDVQNIACGGRHAALVTKQGEIFSWGEESGGRLGH-GVDSDVLHPKLIDA 380

Query: 213 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN--THGQLGHGDTLDRPTPKSI-APLEEVG 269
           L     + V  G   T  +T+ G ++T G+    +G LGHG+ +    PK +  PLE + 
Sbjct: 381 LSNTNIELVACGEYHTCAVTLSGDLYTWGNGAYNYGLLGHGNQVSHWVPKRVNGPLEGI- 439

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
            V  I+ GP +   VT  G +++FG G+   LGHG++     PR +++   KG+  +R S
Sbjct: 440 HVSYISCGPWHTAVVTSAGQLFTFGDGTFGALGHGDRKSVSLPREVESL--KGLRTMRAS 497

Query: 330 AGDEHVVAL 338
            G  H  A+
Sbjct: 498 CGVWHTAAV 506



 Score = 80.9 bits (198), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 116/256 (45%), Gaps = 23/256 (8%)

Query: 100 VEHSSDIVETSAGNMQITT-GRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFT 155
           V H   I   S  N+++   G YHT  ++ S     +  G+   G+LGHG + +  V   
Sbjct: 372 VLHPKLIDALSNTNIELVACGEYHTCAVTLSGDLYTWGNGAYNYGLLGHGNQVSHWVP-K 430

Query: 156 RINFP-SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK 214
           R+N P    HV  +S    H A V  +GQ+FT GD +    GH D  + +  PR VE+LK
Sbjct: 431 RVNGPLEGIHVSYISCGPWHTAVVTSAGQLFTFGDGTFGALGHGD-RKSVSLPREVESLK 489

Query: 215 GVPCKQVTAGLNFTGFLT------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           G+   + + G+  T  +               G + T G    G+LGHGD   +  P  +
Sbjct: 490 GLRTMRASCGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCV 549

Query: 263 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           A +E   +  Q+A G S  +A+T +G VY+ GS     LG+ +   +L  R      +  
Sbjct: 550 ALVEH--NFCQVACGHSLTVALTTSGHVYAMGSPVYGQLGNPQADGKLPTRVEGKLLKS- 606

Query: 323 IHVVRVSAGDEHVVAL 338
             V  ++ G  HV  L
Sbjct: 607 -FVEEIACGAYHVAVL 621



 Score = 74.3 bits (181), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 70/244 (28%), Positives = 109/244 (44%), Gaps = 21/244 (8%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           I+ G +HT +++++  +F+ G    G LGHG    + VS  R +        ++ S    
Sbjct: 444 ISCGPWHTAVVTSAGQLFTFGDGTFGALGHGDR--KSVSLPREVESLKGLRTMRASCGVW 501

Query: 174 HAAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
           H A V++            SG++FT GD      GH D    +  P  V  ++   C QV
Sbjct: 502 HTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV-PTCVALVEHNFC-QV 559

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
             G + T  LT  GHV+  GS  +GQLG+    D   P  +        V +IA G  ++
Sbjct: 560 ACGHSLTVALTTSGHVYAMGSPVYGQLGNPQA-DGKLPTRVEGKLLKSFVEEIACGAYHV 618

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
             +T    VY++G G+N  LGHG+  D   P  +   + K  HV  ++ G     A+   
Sbjct: 619 AVLTLRNEVYTWGKGANGRLGHGDTDDRNNPTLVDALKDK--HVKSIACGTNFTAAICLH 676

Query: 342 GYVS 345
            +VS
Sbjct: 677 KWVS 680



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/241 (25%), Positives = 106/241 (43%), Gaps = 21/241 (8%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           GR+  L+     +FS G    G LGHG + +  +    I+  S  ++  V+  E H   V
Sbjct: 341 GRHAALVTKQGEIFSWGEESGGRLGHGVD-SDVLHPKLIDALSNTNIELVACGEYHTCAV 399

Query: 179 LQSGQVFTCGDNSSF---CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 235
             SG ++T G N ++     GH +        R+   L+G+    ++ G   T  +T  G
Sbjct: 400 TLSGDLYTWG-NGAYNYGLLGHGNQVSHWVPKRVNGPLEGIHVSYISCGPWHTAVVTSAG 458

Query: 236 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE------------EVGSVVQIAAGPSYMLA 283
            + T G  T G LGHGD      P+ +  L+               +VV++  G +   +
Sbjct: 459 QLFTFGDGTFGALGHGDRKSVSLPREVESLKGLRTMRASCGVWHTAAVVEVMVG-NSSSS 517

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
              +G ++++G G    LGHG++  +L P  +        +  +V+ G    VAL +SG+
Sbjct: 518 NCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVALVEH---NFCQVACGHSLTVALTTSGH 574

Query: 344 V 344
           V
Sbjct: 575 V 575



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 71/140 (50%), Gaps = 4/140 (2%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E+   +  + +  G      +T +G + + G  + G+LGHG   D   PK I  L 
Sbjct: 323 PKALESAVVLDVQNIACGGRHAALVTKQGEIFSWGEESGGRLGHGVDSDVLHPKLIDALS 382

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPRAIQTFRRKGIH 324
              ++  +A G  +  AVT +G +Y++G+G+ N+  LGHG Q     P+ +     +GIH
Sbjct: 383 NT-NIELVACGEYHTCAVTLSGDLYTWGNGAYNYGLLGHGNQVSHWVPKRVNG-PLEGIH 440

Query: 325 VVRVSAGDEHVVALDSSGYV 344
           V  +S G  H   + S+G +
Sbjct: 441 VSYISCGPWHTAVVTSAGQL 460



 Score = 54.3 bits (129), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 86/199 (43%), Gaps = 23/199 (11%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQ- 150
           R +R    V H++ +VE       +  G   +   S+  +F+ G    G LGHG +  + 
Sbjct: 492 RTMRASCGVWHTAAVVE-------VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKL 544

Query: 151 ---CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRP 207
              CV+    NF       QV+   +    +  SG V+  G       G+   +  +  P
Sbjct: 545 VPTCVALVEHNF------CQVACGHSLTVALTTSGHVYAMGSPVYGQLGNPQADGKL--P 596

Query: 208 RLVEA--LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 265
             VE   LK    +++  G      LT+R  V+T G   +G+LGHGDT DR  P  +  L
Sbjct: 597 TRVEGKLLKSF-VEEIACGAYHVAVLTLRNEVYTWGKGANGRLGHGDTDDRNNPTLVDAL 655

Query: 266 EEVGSVVQIAAGPSYMLAV 284
           ++   V  IA G ++  A+
Sbjct: 656 KD-KHVKSIACGTNFTAAI 673


>gi|348525468|ref|XP_003450244.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like
           [Oreochromis niloticus]
          Length = 536

 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 101/218 (46%), Gaps = 4/218 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  VF+ G++  G LG G +    +   RI+      +V +S  +  H       G+V+ 
Sbjct: 49  NDEVFALGTNCSGCLGLG-DLQSTIEPRRIDVLCGKKIVSLSYGTGPHVVIATADGEVYA 107

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N     G+  TN  +    +   L      +V  G + T  LT  G V+  G N  G
Sbjct: 108 WGHNGYSQLGNGTTNHGLTPALVSTNLLSKRVTEVACGSHHTIALTTDGEVYAWGYNNSG 167

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T ++PTP+ ++   +   VV IA G    +AV  NG +Y +G   N  LG G  
Sbjct: 168 QVGSGSTANQPTPRRVSSCLQNKVVVNIACGQLCSMAVLDNGEIYGWGYNCNGQLGLGNN 227

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            ++  P  I     +G+++V+V+ G  H +AL   G+V
Sbjct: 228 GNQQTPCRIAAL--QGVNIVQVACGYAHTLALTDEGFV 263



 Score = 67.8 bits (164), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 84/162 (51%), Gaps = 3/162 (1%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTA 223
           V +V+   +H   +   G+V+  G N+S   G   T N+P  R R+   L+      +  
Sbjct: 139 VTEVACGSHHTIALTTDGEVYAWGYNNSGQVGSGSTANQPTPR-RVSSCLQNKVVVNIAC 197

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G   +  +   G ++  G N +GQLG G+  ++ TP  IA L+ V ++VQ+A G ++ LA
Sbjct: 198 GQLCSMAVLDNGEIYGWGYNCNGQLGLGNNGNQQTPCRIAALQGV-NIVQVACGYAHTLA 256

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
           +T  G VY++G+ S   LG G + ++  P  I T + + + V
Sbjct: 257 LTDEGFVYAWGANSYGQLGTGNKSNQALPTPINTDKERIVEV 298



 Score = 51.2 bits (121), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 46/165 (27%), Positives = 78/165 (47%), Gaps = 8/165 (4%)

Query: 115 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           ++  G +HT+ L ++  V++ G +  G +G G    Q       +      VV ++  + 
Sbjct: 141 EVACGSHHTIALTTDGEVYAWGYNNSGQVGSGSTANQPTPRRVSSCLQNKVVVNIACGQL 200

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRD--TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
            +  VL +G+++  G N   C G      N     P  + AL+GV   QV  G   T  L
Sbjct: 201 CSMAVLDNGEIYGWGYN---CNGQLGLGNNGNQQTPCRIAALQGVNIVQVACGYAHTLAL 257

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
           T  G V+  G+N++GQLG G+  ++  P  I   +E   +V++AA
Sbjct: 258 TDEGFVYAWGANSYGQLGTGNKSNQALPTPINTDKE--RIVEVAA 300


>gi|449662010|ref|XP_002161644.2| PREDICTED: uncharacterized protein LOC100207375 [Hydra
           magnipapillata]
          Length = 677

 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 90/189 (47%), Gaps = 3/189 (1%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            P+   + +VS    H A +     +FT GDNS    G  D N P  +P  +E+L+G   
Sbjct: 33  LPNKIQITEVSVGLGHLAVISTERGIFTWGDNSFGQLGVGD-NEPRNQPTEIESLRGKCV 91

Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
             V  G  FT FLT  G V TCG    G LGHGD L   TPK +  L  +  +  + AG 
Sbjct: 92  ISVACGNYFTAFLTDNGLVLTCGQGEFGCLGHGDWLSINTPKLVDELMTL-DITSLVAGS 150

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           +++   T +G VY++G G +   GHG + +   P+ + +F  + + +  V       V +
Sbjct: 151 NHVAITTSDGKVYTWGCGLDGRTGHGTEDNICIPKLV-SFGNEKVFIQNVQCSSNGTVFI 209

Query: 339 DSSGYVSLC 347
             +G +  C
Sbjct: 210 SDAGNLFAC 218



 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 77/176 (43%), Gaps = 18/176 (10%)

Query: 124 LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVLQSG 182
           +  S+  V++ G  L G  GHG E   C+    ++F +    +Q V  S N   F+  +G
Sbjct: 155 ITTSDGKVYTWGCGLDGRTGHGTEDNICIP-KLVSFGNEKVFIQNVQCSSNGTVFISDAG 213

Query: 183 QVFTCGDNSSFCCG-----------HRDTNRPIFRPRLVEALKGVPCKQVTAGLNF---- 227
            +F CG N     G              +++ I     V  L    CK   + + F    
Sbjct: 214 NLFACGSNQGNKLGLNPRQGFLYQFRSKSSKNIVEKAKVPTLVKYSCKYQISTMQFGTSH 273

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
              +++ G V+T G N +GQLG G+   R    ++  LEEV SV  IA G S+ +A
Sbjct: 274 CTMMSVDGKVYTNGENEYGQLGCGNLKPRELLSNVKGLEEV-SVTTIACGSSFSMA 328



 Score = 54.7 bits (130), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 56/210 (26%), Positives = 87/210 (41%), Gaps = 12/210 (5%)

Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           +++ G  H  +IS    +F+ G +  G LG G    +    T I       V+ V+    
Sbjct: 41  EVSVGLGHLAVISTERGIFTWGDNSFGQLGVGDNEPRNQP-TEIESLRGKCVISVACGNY 99

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
             AF+  +G V TCG     C GH D    I  P+LV+ L  +    + AG N     T 
Sbjct: 100 FTAFLTDNGLVLTCGQGEFGCLGHGDW-LSINTPKLVDELMTLDITSLVAGSNHVAITTS 158

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V+T G    G+ GHG   +   PK ++   E   +  +    +  + ++  G +++ 
Sbjct: 159 DGKVYTWGCGLDGRTGHGTEDNICIPKLVSFGNEKVFIQNVQCSSNGTVFISDAGNLFAC 218

Query: 294 GSGSNFCLGHGEQHDELQPRA--IQTFRRK 321
           GS     LG       L PR   +  FR K
Sbjct: 219 GSNQGNKLG-------LNPRQGFLYQFRSK 241


>gi|345857538|ref|ZP_08809972.1| cell wall binding repeat 2 family protein [Desulfosporosinus sp.
           OT]
 gi|344329366|gb|EGW40710.1| cell wall binding repeat 2 family protein [Desulfosporosinus sp.
           OT]
          Length = 732

 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 117/238 (49%), Gaps = 12/238 (5%)

Query: 110 SAGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV 168
           +A + Q+  G    L + +  +V++ G +  G LG G   T  V+ T I      +V+ V
Sbjct: 43  AAASSQLAAGANFGLAVDAQGNVWAWGDNSEGQLGQGVADTNPVA-TPIQVKDLTNVISV 101

Query: 169 SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
           SA   HA  +   G V+  G+N +   G  D   PI  PR VE L+ +    + AGL F+
Sbjct: 102 SAGGVHALALKADGTVWAWGNNETDQLG-VDQASPIAIPRQVEGLQNIVA--IAAGLEFS 158

Query: 229 GFLTIRGHVHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
             L+  G V   G+N + Q+ +  D +   TP+ +     +  VV+IAAG ++ LA+  +
Sbjct: 159 LALSSDGKVWAWGANEYKQINYFSDAIKIATPQIV---NNLSGVVKIAAGSAWCLALKND 215

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-HVVRVSAGDEHVVALDSSGYV 344
           G V+++G+     +G+ +Q  E+        +  GI  V+ VSAG  H +AL   G V
Sbjct: 216 GTVWTWGA-QKVPMGNDDQDGEVT-NITNLTQINGISDVISVSAGYSHSLALKGDGTV 271



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 70/136 (51%), Gaps = 9/136 (6%)

Query: 211 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG--DTLDRPTPKSIAPLEEV 268
           +A       Q+ AG NF   +  +G+V   G N+ GQLG G  DT    TP  +   +++
Sbjct: 39  DARPAAASSQLAAGANFGLAVDAQGNVWAWGDNSEGQLGQGVADTNPVATPIQV---KDL 95

Query: 269 GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 328
            +V+ ++AG  + LA+  +G V+++G+     LG  +      PR ++  +    ++V +
Sbjct: 96  TNVISVSAGGVHALALKADGTVWAWGNNETDQLGVDQASPIAIPRQVEGLQ----NIVAI 151

Query: 329 SAGDEHVVALDSSGYV 344
           +AG E  +AL S G V
Sbjct: 152 AAGLEFSLALSSDGKV 167



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 62/220 (28%), Positives = 98/220 (44%), Gaps = 13/220 (5%)

Query: 91  KRVLRFLQSVEHSS-DIVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLC--GVLGHGP 146
           K++  F  +++ ++  IV   +G ++I  G    L + N  +V++ G+     G      
Sbjct: 176 KQINYFSDAIKIATPQIVNNLSGVVKIAAGSAWCLALKNDGTVWTWGAQKVPMGNDDQDG 235

Query: 147 ETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR 206
           E T   + T+IN    + V+ VSA  +H+  +   G V+  G N     G  D  +    
Sbjct: 236 EVTNITNLTQIN--GISDVISVSAGYSHSLALKGDGTVWGWGSNELLQLGSHD-QQWFDS 292

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P  +  LK V    V+AG   T  LT  G V T G N +GQLG+G   D   P +  P++
Sbjct: 293 PVQISPLKNVTT--VSAGAYLTMALTNDGTVWTLGGNIYGQLGNGIKADS-LPITAYPVK 349

Query: 267 --EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG 304
              +     I+AG  + L     G V+ +G  S   LG G
Sbjct: 350 ASNITQATSISAGYGFALG-RALGSVWGWGDNSKGQLGAG 388



 Score = 45.4 bits (106), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 56/233 (24%), Positives = 99/233 (42%), Gaps = 13/233 (5%)

Query: 100 VEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINF 159
           VE   +IV  +AG        +   L S+  V++ G++    + +  +  +  +   +N 
Sbjct: 142 VEGLQNIVAIAAGL------EFSLALSSDGKVWAWGANEYKQINYFSDAIKIATPQIVN- 194

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV-PC 218
            + + VV+++A       +   G V+T G       G+ D +  +     +  + G+   
Sbjct: 195 -NLSGVVKIAAGSAWCLALKNDGTVWTWG-AQKVPMGNDDQDGEVTNITNLTQINGISDV 252

Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
             V+AG + +  L   G V   GSN   QLG  D     +P  I+PL+ V +V   +AG 
Sbjct: 253 ISVSAGYSHSLALKGDGTVWGWGSNELLQLGSHDQQWFDSPVQISPLKNVTTV---SAGA 309

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
              +A+T +G V++ G      LG+G + D L   A             +SAG
Sbjct: 310 YLTMALTNDGTVWTLGGNIYGQLGNGIKADSLPITAYPVKASNITQATSISAG 362


>gi|357166808|ref|XP_003580861.1| PREDICTED: uncharacterized protein LOC100835494 [Brachypodium
           distachyon]
          Length = 1068

 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 72/246 (29%), Positives = 121/246 (49%), Gaps = 20/246 (8%)

Query: 114 MQITT---GRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQV 168
           +Q++T   G +HT LI++S  +++ G    G LGHG   T  +S+ + +        + V
Sbjct: 369 LQVSTVSCGTWHTALITSSGQLYTFGDGTFGALGHGNRET--ISYPKEVESLKGLRTISV 426

Query: 169 SASENHAAFVLQ---------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 219
           S    H+A V++         SG++FT GD   +  GH D +  + +P  V +L      
Sbjct: 427 SCGVWHSAAVVEVIMTQSNASSGKLFTWGDGDKYRLGHGDRSAKL-KPTCVPSLIDYNFH 485

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
           +   G   T  LT  GH+ T GS+ +GQLG+ +   R  P+ +      G VV++A G  
Sbjct: 486 KSACGHTLTIGLTTSGHMFTVGSSVYGQLGNPNNDGR-YPRLVEDKVGGGGVVEVACGSY 544

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
           ++  +T  G VY++G G+N  LGHG+  D   P  ++  R + +   R++ G     A+ 
Sbjct: 545 HVAVLTNTGEVYTWGKGANGRLGHGDIADRKVPTLVEALRDRSVK--RIACGSSFTAAIS 602

Query: 340 SSGYVS 345
              +VS
Sbjct: 603 QHKWVS 608



 Score = 81.3 bits (199), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 63/199 (31%), Positives = 98/199 (49%), Gaps = 8/199 (4%)

Query: 144 HGP-ETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR 202
           HGP  TT  +    +       V  V+    HAA + +  +VFT G+  S   GH     
Sbjct: 242 HGPGATTDILVPKPLESNVMLDVSYVACGVKHAALITRQAEVFTWGEECSGRLGH-GAGT 300

Query: 203 PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPK 260
            IF+PRL+E+L     + +  G   T  +T  G ++T G  TH  G LGHG T+    PK
Sbjct: 301 SIFQPRLLESLSICNVEIIACGEFHTCAVTATGDLYTWGDGTHNAGLLGHGSTVSHWIPK 360

Query: 261 SIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
            ++ PLE +  V  ++ G  +   +T +G +Y+FG G+   LGHG +     P+ +++  
Sbjct: 361 RVSGPLEGL-QVSTVSCGTWHTALITSSGQLYTFGDGTFGALGHGNRETISYPKEVESL- 418

Query: 320 RKGIHVVRVSAGDEHVVAL 338
            KG+  + VS G  H  A+
Sbjct: 419 -KGLRTISVSCGVWHSAAV 436


>gi|357439465|ref|XP_003590009.1| Serine/threonine protein kinase Nek9 [Medicago truncatula]
 gi|355479057|gb|AES60260.1| Serine/threonine protein kinase Nek9 [Medicago truncatula]
          Length = 1080

 Score = 85.5 bits (210), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 69/233 (29%), Positives = 111/233 (47%), Gaps = 21/233 (9%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + I  G +HT LI SN  +F+ G    GVLGHG    + V++ + +   S    V+V+  
Sbjct: 373 VSIACGAWHTALITSNGKLFTFGDGTLGVLGHG--DRESVAYPKELQLLSGHKAVKVACG 430

Query: 172 ENHAAFVLQ-------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
             H A +++             S ++FT GD   +  GH +      +P  V AL     
Sbjct: 431 VWHTAAIIEVNDQSGSSSNTSSSKKLFTWGDGDQYRLGHAN-KETYLQPTCVAALADYNF 489

Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
            QV  G + T  LT  GHV T GS  +GQLG+  T D   P  +    +  +V +I+ G 
Sbjct: 490 LQVACGHSLTVALTASGHVFTMGSKAYGQLGN-PTSDGKVPILVRDKLQGETVEEISCGT 548

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
            ++  +T    +Y++G G+N  LGHG+  D+  P  ++  + +  HV  ++ G
Sbjct: 549 HHVAVLTSRSELYTWGRGANGRLGHGDIEDQKTPILVEALKER--HVKNIACG 599



 Score = 80.9 bits (198), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 55/168 (32%), Positives = 85/168 (50%), Gaps = 5/168 (2%)

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           +H A V + G++FT G++S    GH   ++   +PRLV++L       V  G   T  ++
Sbjct: 273 SHIALVTRQGEIFTWGEDSGGRLGH-GFDKDYGKPRLVDSLAITSVSFVACGEYHTCAVS 331

Query: 233 IRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           I G ++T G  TH  G LGHG  +    PK +    E   VV IA G  +   +T NG +
Sbjct: 332 ISGDLYTWGDGTHNAGILGHGTDVSHSIPKRVTGPLEGHQVVSIACGAWHTALITSNGKL 391

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           ++FG G+   LGHG++     P+ +Q     G   V+V+ G  H  A+
Sbjct: 392 FTFGDGTLGVLGHGDRESVAYPKELQLL--SGHKAVKVACGVWHTAAI 437



 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 62/242 (25%), Positives = 108/242 (44%), Gaps = 22/242 (9%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH-VVQVSAS 171
           +  G YHT  +S S     +  G+   G+LGHG + +  +   R+  P   H VV ++  
Sbjct: 320 VACGEYHTCAVSISGDLYTWGDGTHNAGILGHGTDVSHSIP-KRVTGPLEGHQVVSIACG 378

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H A +  +G++FT GD +    GH D    +  P+ ++ L G    +V  G+  T  +
Sbjct: 379 AWHTALITSNGKLFTFGDGTLGVLGHGD-RESVAYPKELQLLSGHKAVKVACGVWHTAAI 437

Query: 232 -------------TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
                        +    + T G     +LGH +      P  +A L +  + +Q+A G 
Sbjct: 438 IEVNDQSGSSSNTSSSKKLFTWGDGDQYRLGHANKETYLQPTCVAALADY-NFLQVACGH 496

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           S  +A+T +G V++ GS +   LG+     ++ P  ++  + +G  V  +S G  HV  L
Sbjct: 497 SLTVALTASGHVFTMGSKAYGQLGNPTSDGKV-PILVRD-KLQGETVEEISCGTHHVAVL 554

Query: 339 DS 340
            S
Sbjct: 555 TS 556



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 81/165 (49%), Gaps = 4/165 (2%)

Query: 182 GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 241
           G+V+  G++S        +   +  P+ +E+   +    +  G++    +T +G + T G
Sbjct: 229 GEVWAEGNSSDGLGSQVPSKIDMLIPKPLESDVVLDVNYIEPGVSHIALVTRQGEIFTWG 288

Query: 242 SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC- 300
            ++ G+LGHG   D   P+ +  L  + SV  +A G  +  AV+ +G +Y++G G++   
Sbjct: 289 EDSGGRLGHGFDKDYGKPRLVDSL-AITSVSFVACGEYHTCAVSISGDLYTWGDGTHNAG 347

Query: 301 -LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            LGHG       P+ + T   +G  VV ++ G  H   + S+G +
Sbjct: 348 ILGHGTDVSHSIPKRV-TGPLEGHQVVSIACGAWHTALITSNGKL 391


>gi|413951295|gb|AFW83944.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 1131

 Score = 85.5 bits (210), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 59/192 (30%), Positives = 97/192 (50%), Gaps = 7/192 (3%)

Query: 150 QCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRL 209
            C+    + F     V  +S    HAA V + G++++ G+ S    GH   +  + +P+L
Sbjct: 336 DCLVPKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGH-GVDCDVSQPKL 394

Query: 210 VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLE 266
           ++AL  +  + V  G   T  +T+ G ++T G  T   G LGHG+ +    PK +  PLE
Sbjct: 395 IDALSHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDISHWVPKHVNGPLE 454

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
            +  V  I+ GP +   VT  G +++FG GS   LGHG++     PR +++   KG+  V
Sbjct: 455 GI-HVSSISCGPWHTAVVTSAGQLFTFGDGSFGVLGHGDRESISVPREVESL--KGLRTV 511

Query: 327 RVSAGDEHVVAL 338
           R + G  H  A+
Sbjct: 512 RAACGVWHTAAV 523



 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 104/225 (46%), Gaps = 18/225 (8%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           I+ G +HT +++++  +F+ G    GVLGHG    + +S  R +        V+ +    
Sbjct: 461 ISCGPWHTAVVTSAGQLFTFGDGSFGVLGHGDR--ESISVPREVESLKGLRTVRAACGVW 518

Query: 174 HAAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
           H A V++            SG++FT GD      GH D   P   P  V AL      QV
Sbjct: 519 HTAAVVEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKG-PKLVPTCVAALVEPNFCQV 577

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
             G   T  LT  GHV+T GS  +GQLG+    D   P  +        V +I+ G  ++
Sbjct: 578 ACGHCLTVALTTSGHVYTMGSAVYGQLGNAQA-DGMLPVRVEGKLHKNFVEEISCGAYHV 636

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
             +T    VY++G G+N  LGHG+  D+  P  ++  + K + +V
Sbjct: 637 AVLTSKTEVYTWGKGANGRLGHGDTDDKNTPTLVEALKDKQVRIV 681



 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 108/241 (44%), Gaps = 20/241 (8%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAF 177
           GR+  L+     ++S G    G LGHG +    VS  + I+  S  ++  V+  E H   
Sbjct: 358 GRHAALVTKQGEIYSWGEESGGRLGHGVDCD--VSQPKLIDALSHMNIELVACGEYHTCA 415

Query: 178 VLQSGQVFTCGDNS-SFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGFLTIRG 235
           V  SG ++T GD +  F       +   + P+ V   L+G+    ++ G   T  +T  G
Sbjct: 416 VTLSGDLYTWGDGTFKFGLLGHGNDISHWVPKHVNGPLEGIHVSSISCGPWHTAVVTSAG 475

Query: 236 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE------------EVGSVVQIAAGPSYMLA 283
            + T G  + G LGHGD      P+ +  L+               +VV++ AG +   +
Sbjct: 476 QLFTFGDGSFGVLGHGDRESISVPREVESLKGLRTVRAACGVWHTAAVVEVMAG-NSSSS 534

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
              +G ++++G G    LGHG++  +L P  +        +  +V+ G    VAL +SG+
Sbjct: 535 NCSSGKIFTWGDGDKGRLGHGDKGPKLVPTCVAALVEP--NFCQVACGHCLTVALTTSGH 592

Query: 344 V 344
           V
Sbjct: 593 V 593



 Score = 45.1 bits (105), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 46/176 (26%), Positives = 77/176 (43%), Gaps = 9/176 (5%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQC 151
           R +R    V H++ +VE  AGN   +         S+  +F+ G    G LGHG +  + 
Sbjct: 509 RTVRAACGVWHTAAVVEVMAGNSSSSN-------CSSGKIFTWGDGDKGRLGHGDKGPKL 561

Query: 152 VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE 211
           V  T +      +  QV+        +  SG V+T G       G+   +  +   R+  
Sbjct: 562 VP-TCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGNAQADG-MLPVRVEG 619

Query: 212 ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE 267
            L     ++++ G      LT +  V+T G   +G+LGHGDT D+ TP  +  L++
Sbjct: 620 KLHKNFVEEISCGAYHVAVLTSKTEVYTWGKGANGRLGHGDTDDKNTPTLVEALKD 675



 Score = 42.4 bits (98), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 58/127 (45%), Gaps = 9/127 (7%)

Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH---VVQVSA 170
           Q+  G   T+ ++ S  V++ GS++ G LG+     Q      +      H   V ++S 
Sbjct: 576 QVACGHCLTVALTTSGHVYTMGSAVYGQLGNA----QADGMLPVRVEGKLHKNFVEEISC 631

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
              H A +    +V+T G  ++   GH DT+     P LVEALK    + V  G+NFT  
Sbjct: 632 GAYHVAVLTSKTEVYTWGKGANGRLGHGDTDDK-NTPTLVEALKDKQVRIVVCGINFTAA 690

Query: 231 LTIRGHV 237
           + I   V
Sbjct: 691 ICIHKWV 697


>gi|402869930|ref|XP_003898996.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
           [Papio anubis]
          Length = 932

 Score = 85.5 bits (210), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 61/181 (33%), Positives = 90/181 (49%), Gaps = 4/181 (2%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           ++QVS    H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG
Sbjct: 21  ILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAG 80

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
              +  L++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +
Sbjct: 81  GAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVL 139

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGY 343
           T +G V++FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG 
Sbjct: 140 TKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGL 197

Query: 344 V 344
           +
Sbjct: 198 I 198



 Score = 71.6 bits (174), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 64/194 (32%), Positives = 95/194 (48%), Gaps = 6/194 (3%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++ G +H L L ++   F+ G +  G LG G E     S  R+       + QV+A  
Sbjct: 22  LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGG 81

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG VF  G N++   G  D  +    P  V+ L+      ++ G   T  LT
Sbjct: 82  AHSFALSLSGAVFGWGMNNAGQLGLSD-EKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 140

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGNGVV 290
             G V T G+ + GQLGH    D   P+ +  LE +GS V QIA G  + LA V  +G++
Sbjct: 141 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLI 198

Query: 291 YSFGSGSNFCLGHG 304
           Y+FG G+   LG G
Sbjct: 199 YAFGCGARGQLGTG 212



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 69/137 (50%), Gaps = 4/137 (2%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPL 265
           PRL++ L      QV+ G      L   G   T G N+HGQLG G     + +P+ +  L
Sbjct: 10  PRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL 69

Query: 266 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
           E +  + Q+AAG ++  A++ +G V+ +G  +   LG  ++ D   P  ++  R +   V
Sbjct: 70  EGI-PLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ--KV 126

Query: 326 VRVSAGDEHVVALDSSG 342
           V +S G+EH   L  SG
Sbjct: 127 VYISCGEEHTAVLTKSG 143


>gi|332233512|ref|XP_003265946.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
           [Nomascus leucogenys]
          Length = 932

 Score = 85.5 bits (210), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 61/181 (33%), Positives = 90/181 (49%), Gaps = 4/181 (2%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           ++QVS    H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG
Sbjct: 21  ILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAG 80

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
              +  L++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +
Sbjct: 81  GAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVL 139

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGY 343
           T +G V++FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG 
Sbjct: 140 TKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGL 197

Query: 344 V 344
           +
Sbjct: 198 I 198



 Score = 71.6 bits (174), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 64/194 (32%), Positives = 95/194 (48%), Gaps = 6/194 (3%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++ G +H L L ++   F+ G +  G LG G E     S  R+       + QV+A  
Sbjct: 22  LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGG 81

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG VF  G N++   G  D  +    P  V+ L+      ++ G   T  LT
Sbjct: 82  AHSFALSLSGAVFGWGMNNAGQLGLSD-EKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 140

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGNGVV 290
             G V T G+ + GQLGH    D   P+ +  LE +GS V QIA G  + LA V  +G++
Sbjct: 141 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLI 198

Query: 291 YSFGSGSNFCLGHG 304
           Y+FG G+   LG G
Sbjct: 199 YAFGCGARGQLGTG 212



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 69/137 (50%), Gaps = 4/137 (2%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPL 265
           PRL++ L      QV+ G      L   G   T G N+HGQLG G     + +P+ +  L
Sbjct: 10  PRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL 69

Query: 266 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
           E +  + Q+AAG ++  A++ +G V+ +G  +   LG  ++ D   P  ++  R +   V
Sbjct: 70  EGI-PLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ--KV 126

Query: 326 VRVSAGDEHVVALDSSG 342
           V +S G+EH   L  SG
Sbjct: 127 VYISCGEEHTAVLTKSG 143


>gi|224055315|ref|XP_002298476.1| predicted protein [Populus trichocarpa]
 gi|222845734|gb|EEE83281.1| predicted protein [Populus trichocarpa]
          Length = 1109

 Score = 85.5 bits (210), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 76/245 (31%), Positives = 109/245 (44%), Gaps = 21/245 (8%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G YHT  ++ S     +  G+   G+LGHG E +  V   R+N P    HV  +S  
Sbjct: 372 VACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVP-KRVNGPLEGIHVSSISCG 430

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H A V  +GQ+FT GD +    GH D  + I  PR VE+LKG+   Q   G+  T  +
Sbjct: 431 PWHTAVVSSAGQLFTFGDGTFGVLGHGD-RKSISLPREVESLKGLRTVQAACGVWHTAAV 489

Query: 232 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
                          G + T G    G+LGHGD   +  P  ++ L E  +  Q+A G S
Sbjct: 490 VEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVSALVEP-NFCQVACGHS 548

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
             +A T +G VY+ GS     LG+ +   +L  R      R  +    ++ G  HV  L 
Sbjct: 549 LTIARTTSGHVYTMGSPVYGQLGNPQSDGKLPARVEGKLSRSSVE--EIACGAYHVAVLT 606

Query: 340 SSGYV 344
           S   V
Sbjct: 607 SKTEV 611



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 55/177 (31%), Positives = 92/177 (51%), Gaps = 7/177 (3%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  ++    HAA V + G++F+ G+ S    GH   +  +  P+L+EAL     + V  G
Sbjct: 317 VQNIACGGQHAALVTKQGEIFSWGEESGGRLGH-GVDSDVLHPQLIEALSNTNIEFVACG 375

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYM 281
              T  +T+ G ++T G  T+  G LGHG+ +    PK +  PLE +  V  I+ GP + 
Sbjct: 376 EYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGI-HVSSISCGPWHT 434

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             V+  G +++FG G+   LGHG++     PR +++   KG+  V+ + G  H  A+
Sbjct: 435 AVVSSAGQLFTFGDGTFGVLGHGDRKSISLPREVESL--KGLRTVQAACGVWHTAAV 489



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/225 (30%), Positives = 105/225 (46%), Gaps = 18/225 (8%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           I+ G +HT ++S++  +F+ G    GVLGHG   +  +S  R +        VQ +    
Sbjct: 427 ISCGPWHTAVVSSAGQLFTFGDGTFGVLGHGDRKS--ISLPREVESLKGLRTVQAACGVW 484

Query: 174 HAAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
           H A V++            SG++FT GD      GH D    +  P  V AL      QV
Sbjct: 485 HTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV-PTCVSALVEPNFCQV 543

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
             G + T   T  GHV+T GS  +GQLG+  + D   P  +       SV +IA G  ++
Sbjct: 544 ACGHSLTIARTTSGHVYTMGSPVYGQLGNPQS-DGKLPARVEGKLSRSSVEEIACGAYHV 602

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
             +T    VY++G G+N  LGHG+  D+  P  ++  + K +  +
Sbjct: 603 AVLTSKTEVYTWGKGANGRLGHGDTDDKNLPSLVEALKDKQVKSI 647



 Score = 55.1 bits (131), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 69/138 (50%), Gaps = 4/138 (2%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E+   +  + +  G      +T +G + + G  + G+LGHG   D   P+ I  L 
Sbjct: 306 PKALESAVVLDVQNIACGGQHAALVTKQGEIFSWGEESGGRLGHGVDSDVLHPQLIEALS 365

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPRAIQTFRRKGIH 324
              ++  +A G  +  AVT +G +Y++G G+ NF  LGHG +     P+ +     +GIH
Sbjct: 366 NT-NIEFVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNG-PLEGIH 423

Query: 325 VVRVSAGDEHVVALDSSG 342
           V  +S G  H   + S+G
Sbjct: 424 VSSISCGPWHTAVVSSAG 441


>gi|403263469|ref|XP_003924054.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 2
           [Saimiri boliviensis boliviensis]
          Length = 988

 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 73/243 (30%), Positives = 110/243 (45%), Gaps = 23/243 (9%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 165
           +Q  +G  H LL+ +NS V SCG +  G LG         PE  Q +   + +       
Sbjct: 26  LQAASGERHALLLLTNSLVHSCGENSRGQLGRRGAPRWDLPEPVQALKTLKFDL------ 79

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
             VS  + H+  V   G+VF  G  S    G  +     F PR +  L G+   QV+ G 
Sbjct: 80  --VSCGKEHSLAVCHKGRVFAWGAGSEGQLGVGELKEINFTPRKITTLNGIKIIQVSCGH 137

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             +  L+    V + G N+HGQLG G     +P+P+ +  LE +  + Q+AAG ++  A+
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQPSPQRVRSLEGI-PLAQVAAGGAHSFAL 196

Query: 285 TGNGVVYSFGSGSNFCL---GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           +  G  + +GS S   L   G   Q    +P +I   +  G  V+ +S GDEH   L   
Sbjct: 197 SLCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLG--VIYISCGDEHTAVLSQD 254

Query: 342 GYV 344
           G V
Sbjct: 255 GKV 257



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 117/230 (50%), Gaps = 16/230 (6%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFT--RINFPSAAHVVQVSASE 172
           ++ G+ H+L + +   VF+ G+   G LG G    + ++FT  +I   +   ++QVS   
Sbjct: 80  VSCGKEHSLAVCHKGRVFAWGAGSEGQLGVG--ELKEINFTPRKITTLNGIKIIQVSCGH 137

Query: 173 NHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            H+  + +  QVF+ G NS      G    ++P   P+ V +L+G+P  QV AG   +  
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQP--SPQRVRSLEGIPLAQVAAGGAHSFA 195

Query: 231 LTIRGHVHTCGSNTHGQL---GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           L++ G     GSN+ GQL   G    +    P SI  L+ +G V+ I+ G  +   ++ +
Sbjct: 196 LSLCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLG-VIYISCGDEHTAVLSQD 254

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           G V++FG  S+  LG+    ++  P+ ++  R  G+ V ++  G +H +A
Sbjct: 255 GKVFTFGDNSSGQLGYSPTPEKRGPQLVE--RIDGL-VSQIDCGGDHTIA 301



 Score = 72.4 bits (176), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 55/181 (30%), Positives = 93/181 (51%), Gaps = 4/181 (2%)

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           A ++Q ++ E HA  +L +  V +CG+NS    G R   R    P  V+ALK +    V+
Sbjct: 23  AELLQAASGERHALLLLTNSLVHSCGENSRGQLGRRGAPRWDL-PEPVQALKTLKFDLVS 81

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYM 281
            G   +  +  +G V   G+ + GQLG G+  +   TP+ I  L  +  ++Q++ G  + 
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGVGELKEINFTPRKITTLNGI-KIIQVSCGHYHS 140

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           LA++ +  V+S+G  S+  LG G++    QP   +    +GI + +V+AG  H  AL   
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKEFPS-QPSPQRVRSLEGIPLAQVAAGGAHSFALSLC 199

Query: 342 G 342
           G
Sbjct: 200 G 200



 Score = 67.8 bits (164), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 59/187 (31%), Positives = 89/187 (47%), Gaps = 6/187 (3%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++ G YH+L +S +S VFS G +  G LG G E     S  R+       + QV+A  
Sbjct: 131 IQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQPSPQRVRSLEGIPLAQVAAGG 190

Query: 173 NHAAFVLQSGQVFTCGDNSS--FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            H+  +   G  F  G NS+       R+      +P  + ALK +    ++ G   T  
Sbjct: 191 AHSFALSLCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLGVIYISCGDEHTAV 250

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA-VTGNGV 289
           L+  G V T G N+ GQLG+  T ++  P+ +  ++  G V QI  G  + +A V   G 
Sbjct: 251 LSQDGKVFTFGDNSSGQLGYSPTPEKRGPQLVERID--GLVSQIDCGGDHTIAYVHTTGQ 308

Query: 290 VYSFGSG 296
           V SFG G
Sbjct: 309 VVSFGRG 315



 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 63/138 (45%), Gaps = 4/138 (2%)

Query: 208 RLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE 267
           R  E   G    Q  +G      L     VH+CG N+ GQLG         P+ +  L+ 
Sbjct: 15  RRTEGSPGAELLQAASGERHALLLLTNSLVHSCGENSRGQLGRRGAPRWDLPEPVQALKT 74

Query: 268 VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD-ELQPRAIQTFRRKGIHVV 326
           +   + ++ G  + LAV   G V+++G+GS   LG GE  +    PR I T    GI ++
Sbjct: 75  LKFDL-VSCGKEHSLAVCHKGRVFAWGAGSEGQLGVGELKEINFTPRKITTL--NGIKII 131

Query: 327 RVSAGDEHVVALDSSGYV 344
           +VS G  H +AL     V
Sbjct: 132 QVSCGHYHSLALSKDSQV 149


>gi|410110896|ref|NP_001258531.1| probable E3 ubiquitin-protein ligase HERC3 isoform 2 [Homo sapiens]
 gi|397480081|ref|XP_003811324.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
           [Pan paniscus]
 gi|426344935|ref|XP_004039159.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
           [Gorilla gorilla gorilla]
 gi|194382994|dbj|BAG59053.1| unnamed protein product [Homo sapiens]
          Length = 932

 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 61/181 (33%), Positives = 90/181 (49%), Gaps = 4/181 (2%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           ++QVS    H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG
Sbjct: 21  ILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAG 80

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
              +  L++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +
Sbjct: 81  GAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVL 139

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGY 343
           T +G V++FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG 
Sbjct: 140 TKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGL 197

Query: 344 V 344
           +
Sbjct: 198 I 198



 Score = 71.6 bits (174), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 64/194 (32%), Positives = 95/194 (48%), Gaps = 6/194 (3%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++ G +H L L ++   F+ G +  G LG G E     S  R+       + QV+A  
Sbjct: 22  LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGG 81

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG VF  G N++   G  D  +    P  V+ L+      ++ G   T  LT
Sbjct: 82  AHSFALSLSGAVFGWGMNNAGQLGLSD-EKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 140

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGNGVV 290
             G V T G+ + GQLGH    D   P+ +  LE +GS V QIA G  + LA V  +G++
Sbjct: 141 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLI 198

Query: 291 YSFGSGSNFCLGHG 304
           Y+FG G+   LG G
Sbjct: 199 YAFGCGARGQLGTG 212



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 69/137 (50%), Gaps = 4/137 (2%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPL 265
           PRL++ L      QV+ G      L   G   T G N+HGQLG G     + +P+ +  L
Sbjct: 10  PRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL 69

Query: 266 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
           E +  + Q+AAG ++  A++ +G V+ +G  +   LG  ++ D   P  ++  R +   V
Sbjct: 70  EGI-PLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ--KV 126

Query: 326 VRVSAGDEHVVALDSSG 342
           V +S G+EH   L  SG
Sbjct: 127 VYISCGEEHTAVLTKSG 143


>gi|302796691|ref|XP_002980107.1| hypothetical protein SELMODRAFT_112120 [Selaginella moellendorffii]
 gi|300152334|gb|EFJ18977.1| hypothetical protein SELMODRAFT_112120 [Selaginella moellendorffii]
          Length = 1090

 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 59/174 (33%), Positives = 90/174 (51%), Gaps = 7/174 (4%)

Query: 168 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
           ++    HAA V + G+VF  GD S    GH   +  +  P+LVEAL     + V  G   
Sbjct: 312 IACGNRHAALVTKQGEVFCWGDESGGRLGH-GVDVDVAHPKLVEALATTNTEFVACGEYH 370

Query: 228 TGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYMLAV 284
           +  +T+ G + T G  TH  G LGHG+ +   TPK +  PLE +  V  +A G  +   V
Sbjct: 371 SCAVTLSGDLFTWGDGTHSYGLLGHGNDISHWTPKRVGGPLEGI-RVSSVACGVWHTALV 429

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           T  G +++FG G+   LGHG++     P+ +++   KG+  VRV+ G  H  A+
Sbjct: 430 TSAGQLFTFGDGTFGVLGHGDKRSVALPKEVESL--KGLKTVRVACGVWHTAAV 481



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 74/248 (29%), Positives = 111/248 (44%), Gaps = 18/248 (7%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G +HT L++++  +F+ G    GVLGHG + +  +    +        V+V+    H
Sbjct: 419 VACGVWHTALVTSAGQLFTFGDGTFGVLGHGDKRSVALP-KEVESLKGLKTVRVACGVWH 477

Query: 175 AAFVLQ-----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
            A V++           SG++FT GD      GH D  + +  P  V AL     KQV  
Sbjct: 478 TAAVVEVMVGYSNAGGSSGKLFTWGDGDKGRLGHGDKEQKLV-PTCVAALVDYNFKQVAC 536

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G   T  LTI G V T GS+ +GQLG     D   P  +        V +IA G  ++  
Sbjct: 537 GHTLTVALTINGRVFTMGSSLYGQLGDVRA-DGKLPGLVEGRLWEAFVEEIACGAYHVAV 595

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD---S 340
           +T    VY++G G+N  LGHG+  D   P  ++  + K +  V   +G    + L    S
Sbjct: 596 LTAKTEVYTWGKGANGRLGHGDVMDRNTPTLVEALKEKQVKSVACGSGFTAAICLHKWVS 655

Query: 341 SGYVSLCS 348
               SLCS
Sbjct: 656 GADQSLCS 663



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 84/201 (41%), Gaps = 27/201 (13%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQC 151
           + +R    V H++ +VE   G        Y     S+  +F+ G    G LGHG +  + 
Sbjct: 467 KTVRVACGVWHTAAVVEVMVG--------YSNAGGSSGKLFTWGDGDKGRLGHGDKEQKL 518

Query: 152 V-----SFTRINFPSAA--HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRP- 203
           V     +    NF   A  H + V+ + N   F + S      GD  +      D   P 
Sbjct: 519 VPTCVAALVDYNFKQVACGHTLTVALTINGRVFTMGSSLYGQLGDVRA------DGKLPG 572

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +   RL EA      +++  G      LT +  V+T G   +G+LGHGD +DR TP  + 
Sbjct: 573 LVEGRLWEAF----VEEIACGAYHVAVLTAKTEVYTWGKGANGRLGHGDVMDRNTPTLVE 628

Query: 264 PLEEVGSVVQIAAGPSYMLAV 284
            L+E   V  +A G  +  A+
Sbjct: 629 ALKE-KQVKSVACGSGFTAAI 648



 Score = 45.4 bits (106), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 74/165 (44%), Gaps = 6/165 (3%)

Query: 182 GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 241
           G VF  G++     G   T+     P+ +E+   +    +  G      +T +G V   G
Sbjct: 275 GDVFLWGESVGSGDGGIKTDS--LLPKALESAVVLDVHHIACGNRHAALVTKQGEVFCWG 332

Query: 242 SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF-- 299
             + G+LGHG  +D   PK +  L    +   +A G  +  AVT +G ++++G G++   
Sbjct: 333 DESGGRLGHGVDVDVAHPKLVEALATTNTEF-VACGEYHSCAVTLSGDLFTWGDGTHSYG 391

Query: 300 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            LGHG       P+ +     +GI V  V+ G  H   + S+G +
Sbjct: 392 LLGHGNDISHWTPKRVGG-PLEGIRVSSVACGVWHTALVTSAGQL 435


>gi|15238303|ref|NP_199029.1| Regulator of chromosome condensation (RCC1) family with FYVE zinc
           finger domain [Arabidopsis thaliana]
 gi|9757959|dbj|BAB08447.1| TMV resistance protein-like [Arabidopsis thaliana]
 gi|332007389|gb|AED94772.1| Regulator of chromosome condensation (RCC1) family with FYVE zinc
           finger domain [Arabidopsis thaliana]
          Length = 1073

 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 73/243 (30%), Positives = 112/243 (46%), Gaps = 19/243 (7%)

Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           ++ G +HT LI S   +F+ G    GVLGHG + T  V + R +   S    + V+    
Sbjct: 384 VSCGPWHTALITSTGQLFTFGDGTFGVLGHGDKET--VFYPREVESLSGLRTIAVACGVW 441

Query: 174 HAAFVLQ-----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           HAA +++           SG++FT GD      GH D   P  +P  V AL      +V 
Sbjct: 442 HAAAIVEVIVTHSSSSVSSGKLFTWGDGDKSRLGHGD-KEPRLKPTCVSALIDHTFHRVA 500

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
            G + T  LT  G V+T GS  +GQLG+ +  D   P  +        V +IA G  ++ 
Sbjct: 501 CGHSLTVGLTTSGKVYTMGSTVYGQLGNPNA-DGKLPCLVEDKLTKDCVEEIACGAYHVA 559

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            +T    V+++G G+N  LGHG+  D   P  +   + +  HV  ++ G     A+    
Sbjct: 560 VLTSRNEVFTWGKGANGRLGHGDVEDRKAPTLVDALKER--HVKNIACGSNFTAAICLHK 617

Query: 343 YVS 345
           +VS
Sbjct: 618 WVS 620



 Score = 84.3 bits (207), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 54/169 (31%), Positives = 87/169 (51%), Gaps = 7/169 (4%)

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            HAA V + G+VFT G+ S    GH    + +  P+L+E+L       V  G   T  +T
Sbjct: 282 KHAALVSRQGEVFTWGEASGGRLGH-GMGKDVTGPQLIESLAATSIDFVACGEFHTCAVT 340

Query: 233 IRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGV 289
           + G ++T G  TH  G LGHG  +    PK I+ PLE +  +  ++ GP +   +T  G 
Sbjct: 341 MTGEIYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGL-QIASVSCGPWHTALITSTGQ 399

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           +++FG G+   LGHG++     PR +++    G+  + V+ G  H  A+
Sbjct: 400 LFTFGDGTFGVLGHGDKETVFYPREVESL--SGLRTIAVACGVWHAAAI 446



 Score = 72.4 bits (176), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 67/250 (26%), Positives = 107/250 (42%), Gaps = 32/250 (12%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQ 167
           I  G  H  L+S    VF+ G +  G LGHG       P+  + ++ T I+F        
Sbjct: 277 IACGVKHAALVSRQGEVFTWGEASGGRLGHGMGKDVTGPQLIESLAATSIDF-------- 328

Query: 168 VSASENHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
           V+  E H   V  +G+++T GD +  +   GH          R+   L+G+    V+ G 
Sbjct: 329 VACGEFHTCAVTMTGEIYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQIASVSCGP 388

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
             T  +T  G + T G  T G LGHGD      P+ +  L  + ++  +A G  +  A+ 
Sbjct: 389 WHTALITSTGQLFTFGDGTFGVLGHGDKETVFYPREVESLSGLRTIA-VACGVWHAAAIV 447

Query: 286 -----------GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 334
                       +G ++++G G    LGHG++   L+P  +        H  RV+ G   
Sbjct: 448 EVIVTHSSSSVSSGKLFTWGDGDKSRLGHGDKEPRLKPTCVSALIDHTFH--RVACGHSL 505

Query: 335 VVALDSSGYV 344
            V L +SG V
Sbjct: 506 TVGLTTSGKV 515



 Score = 51.2 bits (121), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 71/151 (47%), Gaps = 4/151 (2%)

Query: 196 GHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD 255
           G+  +   +  P+ +E+   +    +  G+     ++ +G V T G  + G+LGHG   D
Sbjct: 252 GYLGSRSDVLIPKPLESNVVLDVHHIACGVKHAALVSRQGEVFTWGEASGGRLGHGMGKD 311

Query: 256 RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPR 313
              P+ I  L    S+  +A G  +  AVT  G +Y++G G++    LGHG       P+
Sbjct: 312 VTGPQLIESLAAT-SIDFVACGEFHTCAVTMTGEIYTWGDGTHNAGLLGHGTDVSHWIPK 370

Query: 314 AIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            I +   +G+ +  VS G  H   + S+G +
Sbjct: 371 RI-SGPLEGLQIASVSCGPWHTALITSTGQL 400


>gi|403263467|ref|XP_003924053.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 1
           [Saimiri boliviensis boliviensis]
          Length = 1024

 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 73/243 (30%), Positives = 110/243 (45%), Gaps = 23/243 (9%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 165
           +Q  +G  H LL+ +NS V SCG +  G LG         PE  Q +   + +       
Sbjct: 26  LQAASGERHALLLLTNSLVHSCGENSRGQLGRRGAPRWDLPEPVQALKTLKFDL------ 79

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
             VS  + H+  V   G+VF  G  S    G  +     F PR +  L G+   QV+ G 
Sbjct: 80  --VSCGKEHSLAVCHKGRVFAWGAGSEGQLGVGELKEINFTPRKITTLNGIKIIQVSCGH 137

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             +  L+    V + G N+HGQLG G     +P+P+ +  LE +  + Q+AAG ++  A+
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQPSPQRVRSLEGI-PLAQVAAGGAHSFAL 196

Query: 285 TGNGVVYSFGSGSNFCL---GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           +  G  + +GS S   L   G   Q    +P +I   +  G  V+ +S GDEH   L   
Sbjct: 197 SLCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLG--VIYISCGDEHTAVLSQD 254

Query: 342 GYV 344
           G V
Sbjct: 255 GKV 257



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 117/230 (50%), Gaps = 16/230 (6%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFT--RINFPSAAHVVQVSASE 172
           ++ G+ H+L + +   VF+ G+   G LG G    + ++FT  +I   +   ++QVS   
Sbjct: 80  VSCGKEHSLAVCHKGRVFAWGAGSEGQLGVG--ELKEINFTPRKITTLNGIKIIQVSCGH 137

Query: 173 NHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            H+  + +  QVF+ G NS      G    ++P   P+ V +L+G+P  QV AG   +  
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQP--SPQRVRSLEGIPLAQVAAGGAHSFA 195

Query: 231 LTIRGHVHTCGSNTHGQL---GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           L++ G     GSN+ GQL   G    +    P SI  L+ +G V+ I+ G  +   ++ +
Sbjct: 196 LSLCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLG-VIYISCGDEHTAVLSQD 254

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           G V++FG  S+  LG+    ++  P+ ++  R  G+ V ++  G +H +A
Sbjct: 255 GKVFTFGDNSSGQLGYSPTPEKRGPQLVE--RIDGL-VSQIDCGGDHTIA 301



 Score = 72.4 bits (176), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 55/181 (30%), Positives = 93/181 (51%), Gaps = 4/181 (2%)

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           A ++Q ++ E HA  +L +  V +CG+NS    G R   R    P  V+ALK +    V+
Sbjct: 23  AELLQAASGERHALLLLTNSLVHSCGENSRGQLGRRGAPRWDL-PEPVQALKTLKFDLVS 81

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYM 281
            G   +  +  +G V   G+ + GQLG G+  +   TP+ I  L  +  ++Q++ G  + 
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGVGELKEINFTPRKITTLNGI-KIIQVSCGHYHS 140

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           LA++ +  V+S+G  S+  LG G++    QP   +    +GI + +V+AG  H  AL   
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKEFPS-QPSPQRVRSLEGIPLAQVAAGGAHSFALSLC 199

Query: 342 G 342
           G
Sbjct: 200 G 200



 Score = 67.4 bits (163), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 59/187 (31%), Positives = 89/187 (47%), Gaps = 6/187 (3%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++ G YH+L +S +S VFS G +  G LG G E     S  R+       + QV+A  
Sbjct: 131 IQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQPSPQRVRSLEGIPLAQVAAGG 190

Query: 173 NHAAFVLQSGQVFTCGDNSS--FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            H+  +   G  F  G NS+       R+      +P  + ALK +    ++ G   T  
Sbjct: 191 AHSFALSLCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLGVIYISCGDEHTAV 250

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA-VTGNGV 289
           L+  G V T G N+ GQLG+  T ++  P+ +  ++  G V QI  G  + +A V   G 
Sbjct: 251 LSQDGKVFTFGDNSSGQLGYSPTPEKRGPQLVERID--GLVSQIDCGGDHTIAYVHTTGQ 308

Query: 290 VYSFGSG 296
           V SFG G
Sbjct: 309 VVSFGRG 315



 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 63/138 (45%), Gaps = 4/138 (2%)

Query: 208 RLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE 267
           R  E   G    Q  +G      L     VH+CG N+ GQLG         P+ +  L+ 
Sbjct: 15  RRTEGSPGAELLQAASGERHALLLLTNSLVHSCGENSRGQLGRRGAPRWDLPEPVQALKT 74

Query: 268 VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD-ELQPRAIQTFRRKGIHVV 326
           +   + ++ G  + LAV   G V+++G+GS   LG GE  +    PR I T    GI ++
Sbjct: 75  LKFDL-VSCGKEHSLAVCHKGRVFAWGAGSEGQLGVGELKEINFTPRKITTL--NGIKII 131

Query: 327 RVSAGDEHVVALDSSGYV 344
           +VS G  H +AL     V
Sbjct: 132 QVSCGHYHSLALSKDSQV 149


>gi|428178434|gb|EKX47309.1| hypothetical protein GUITHDRAFT_137494 [Guillardia theta CCMP2712]
          Length = 432

 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 62/201 (30%), Positives = 97/201 (48%), Gaps = 8/201 (3%)

Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           ++  G  H+++++ S  + +CG +  G LG G        F  +       +  V+A   
Sbjct: 108 KVACGGAHSMIVTESGRLLTCGLNDNGQLGLG-NLENASEFEEVK--GTESIADVAAGFW 164

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPI-FRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           H     + G+++  G N     GH DT   +   P+ +  L+  P KQV  G   +  LT
Sbjct: 165 HTLAASKKGKLYAWGSNKHGQLGHHDTAVKLAVEPQEILLLRDAPIKQVACGSYHSMALT 224

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVY 291
             G V+T G   HG+LGHG T D   PK +  L  VG ++  I AG  Y  AV+ +G V+
Sbjct: 225 KDGEVYTWGFGAHGRLGHGSTEDEFMPKRVEAL--VGENISSIHAGFEYSSAVSTSGKVF 282

Query: 292 SFGSGSNFCLGHGEQHDELQP 312
            +G G  + LG G++ D+L P
Sbjct: 283 VWGYGHFYVLGQGDKKDQLAP 303



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 94/184 (51%), Gaps = 12/184 (6%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCG--DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           + +V+    H+  V +SG++ TCG  DN     G+ +        +  E++       V 
Sbjct: 106 IKKVACGGAHSMIVTESGRLLTCGLNDNGQLGLGNLENASEFEEVKGTESI-----ADVA 160

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT--PKSIAPLEEVGSVVQIAAGPSY 280
           AG   T   + +G ++  GSN HGQLGH DT  +    P+ I  L +   + Q+A G  +
Sbjct: 161 AGFWHTLAASKKGKLYAWGSNKHGQLGHHDTAVKLAVEPQEILLLRDA-PIKQVACGSYH 219

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            +A+T +G VY++G G++  LGHG   DE  P+ ++     G ++  + AG E+  A+ +
Sbjct: 220 SMALTKDGEVYTWGFGAHGRLGHGSTEDEFMPKRVEALV--GENISSIHAGFEYSSAVST 277

Query: 341 SGYV 344
           SG V
Sbjct: 278 SGKV 281



 Score = 60.8 bits (146), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 64/235 (27%), Positives = 102/235 (43%), Gaps = 15/235 (6%)

Query: 99  SVEHSSDIVETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRI 157
           +VE    ++   A   Q+  G YH++ L  +  V++ G    G LGHG    + +   R+
Sbjct: 196 AVEPQEILLLRDAPIKQVACGSYHSMALTKDGEVYTWGFGAHGRLGHGSTEDEFMP-KRV 254

Query: 158 NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVP 217
                 ++  + A   +++ V  SG+VF  G    +  G  D      + +L   +   P
Sbjct: 255 EALVGENISSIHAGFEYSSAVSTSGKVFVWGYGHFYVLGQGDK-----KDQLAPVVLDFP 309

Query: 218 C--KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT----PKSIAPLEEVGSV 271
              +Q+  G      ++  G + T G  THG LGHG  L  P     P  +    ++ + 
Sbjct: 310 TSIRQLAFGSFHAAAVSHSGMLFTWGHATHGPLGHG--LKSPNIILEPTVLDAPAQLQNS 367

Query: 272 VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
            Q+A G  + L VTG G V+SFG G    LG G   D  +P+ I  F  K +  V
Sbjct: 368 KQVACGSQHTLVVTGTGDVFSFGLGGQGQLGLGSDLDHYEPKQIPRFVGKSLRQV 422



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/154 (31%), Positives = 73/154 (47%), Gaps = 14/154 (9%)

Query: 200 TNRPIFR-----PRLVE--ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD 252
           T+ PIF      P  VE   L     K+V  G   +  +T  G + TCG N +GQLG G+
Sbjct: 81  TDAPIFEVIQKEPEKVEKPVLPAKLIKKVACGGAHSMIVTESGRLLTCGLNDNGQLGLGN 140

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL-- 310
             +    + +   E   S+  +AAG  + LA +  G +Y++GS  +  LGH +   +L  
Sbjct: 141 LENASEFEEVKGTE---SIADVAAGFWHTLAASKKGKLYAWGSNKHGQLGHHDTAVKLAV 197

Query: 311 QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           +P+ I   R   I   +V+ G  H +AL   G V
Sbjct: 198 EPQEILLLRDAPIK--QVACGSYHSMALTKDGEV 229


>gi|307193259|gb|EFN76150.1| Probable E3 ubiquitin-protein ligase HERC4 [Harpegnathos saltator]
          Length = 1054

 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 63/220 (28%), Positives = 111/220 (50%), Gaps = 15/220 (6%)

Query: 131 VFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 189
           +F  GS++ G LG G  E     +   +NF  A  + Q++  +N+   V + GQV++CG+
Sbjct: 1   MFCWGSTIHGELGLGGIEDENIFTPREVNFEKANEIEQIACGDNYTIAVTKEGQVYSCGN 60

Query: 190 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
           N     G     +   R +L+  +  +  ++   G + T  +   G + + GSN  GQLG
Sbjct: 61  NDHGQLGQEKGRK---RLQLISGIDPLAFRKAACGSSHTLVVNEWGQLFSWGSNVEGQLG 117

Query: 250 HGDTLDRPTPKSIAP--LEEVGS--VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG- 304
               LDR +     P  ++ +G+  +VQIA G  + +A+T NG +Y++GS S+  LG G 
Sbjct: 118 ----LDRVSATIREPRMVKTLGTKIIVQIACGLKHSIALTNNGELYAWGSNSDGQLGLGS 173

Query: 305 EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           +   EL+P+ + +     + +  V+ G  H + +  SG V
Sbjct: 174 DTKMELKPKLVHSL--AAVPIAFVACGGYHTIVISKSGAV 211



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 101/221 (45%), Gaps = 4/221 (1%)

Query: 119 GRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 177
           G  HTL+++    +FS GS++ G LG    +        +       +VQ++    H+  
Sbjct: 92  GSSHTLVVNEWGQLFSWGSNVEGQLGLDRVSATIREPRMVKTLGTKIIVQIACGLKHSIA 151

Query: 178 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
           +  +G+++  G NS    G     +   +P+LV +L  VP   V  G   T  ++  G V
Sbjct: 152 LTNNGELYAWGSNSDGQLGLGSDTKMELKPKLVHSLAAVPIAFVACGGYHTIVISKSGAV 211

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
              G NT GQLG  D  +R  P  +  L     V   A G  + + +T +G V++ G+G 
Sbjct: 212 FAWGRNTFGQLGLSDIQNRNVPCQLRTLRN-SRVCYAACGEEFSVFLTMDGGVFTCGAGM 270

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
              LGHG +  E+ PR I      G  V ++S G  H +AL
Sbjct: 271 YGQLGHGNKTSEILPRQIMELM--GSTVTQISCGRRHTLAL 309



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 68/238 (28%), Positives = 108/238 (45%), Gaps = 14/238 (5%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGH--GPETTQCVS-FTRINFPSAAHVVQVSA 170
           QI  G  +T+ ++    V+SCG++  G LG   G +  Q +S    + F  AA       
Sbjct: 38  QIACGDNYTIAVTKEGQVYSCGNNDHGQLGQEKGRKRLQLISGIDPLAFRKAA------C 91

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
             +H   V + GQ+F+ G N     G    +  I  PR+V+ L      Q+  GL  +  
Sbjct: 92  GSSHTLVVNEWGQLFSWGSNVEGQLGLDRVSATIREPRMVKTLGTKIIVQIACGLKHSIA 151

Query: 231 LTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
           LT  G ++  GSN+ GQLG G DT     PK +  L  V  +  +A G  + + ++ +G 
Sbjct: 152 LTNNGELYAWGSNSDGQLGLGSDTKMELKPKLVHSLAAV-PIAFVACGGYHTIVISKSGA 210

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSLC 347
           V+++G  +   LG  +  +   P  ++T R     V   + G+E  V L   G V  C
Sbjct: 211 VFAWGRNTFGQLGLSDIQNRNVPCQLRTLRNS--RVCYAACGEEFSVFLTMDGGVFTC 266



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 66/149 (44%), Gaps = 4/149 (2%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G YHT++IS S +VF+ G +  G LG      + V   ++     + V   +  E  
Sbjct: 195 VACGGYHTIVISKSGAVFAWGRNTFGQLGLSDIQNRNVP-CQLRTLRNSRVCYAACGEEF 253

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFLTI 233
           + F+   G VFTCG       GH +    I  PR +  L G    Q++ G   T   +  
Sbjct: 254 SVFLTMDGGVFTCGAGMYGQLGHGNKTSEIL-PRQIMELMGSTVTQISCGRRHTLALVPS 312

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           RG V+  G    GQLG+    +  TP+ +
Sbjct: 313 RGRVYAWGLGGAGQLGNRIAQNSTTPQVV 341


>gi|452823021|gb|EME30035.1| E3 ubiquitin-protein ligase HERC2 [Galdieria sulphuraria]
          Length = 432

 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 106/227 (46%), Gaps = 8/227 (3%)

Query: 120 RYHTLLISNSSVFSC-GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           R     + N ++ +  G +L G LG G E      F  +   S   +V V+A ++  A +
Sbjct: 48  RMKKAALENGTLLTTFGLNLIGQLGQGHERPADRPFP-VEALSGKRIVYVAAGDSCTAAI 106

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              G V+T G       GH D +     PRLVEALKG    +V+ G N    +   GH++
Sbjct: 107 SLDGDVYTWGSGEYGKLGHNDDSNENL-PRLVEALKGKNIVKVSIGGNHMAAIDKDGHLY 165

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
             G       G G T     P+ I    E   V+ ++ G S+  AVT  G V+++G+G  
Sbjct: 166 CWGRAA--SAGSGGTEHVFIPRLIKGDLEKEKVISVSCGRSHTAAVTEKGEVWTWGNGYE 223

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVS 345
             LGHGE++ + QP+ +Q+   K   VV V+ G +  + +  SG  S
Sbjct: 224 GELGHGEKNSQYQPKKVQSLTEK---VVDVACGRDFTIFVCESGLYS 267



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 57/182 (31%), Positives = 98/182 (53%), Gaps = 11/182 (6%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V+ VS   +H A V + G+V+T G+      GH + N   ++P+ V++L       V  G
Sbjct: 196 VISVSCGRSHTAAVTEKGEVWTWGNGYEGELGHGEKNSQ-YQPKKVQSLT-EKVVDVACG 253

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLG----HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
            +FT F+   G +++CG++ +GQLG    HG+   + TP+S++    +  VV I+AG  +
Sbjct: 254 RDFTIFVCESG-LYSCGADDYGQLGLGRSHGERFVQ-TPRSLSGTG-LSDVVAISAGDYH 310

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           + A+  +G+VY++G G    LGHGE+ D    + +   R     +V+V+ G  H  A+  
Sbjct: 311 VCALGRDGLVYTWGLGREGQLGHGEKADCSLAKPVDNLRN--FEIVQVACGGGHTAAVTK 368

Query: 341 SG 342
            G
Sbjct: 369 DG 370



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 70/238 (29%), Positives = 108/238 (45%), Gaps = 14/238 (5%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPS-AAHVVQVSAS 171
           + ++ GR HT  ++    V++ G+   G LGHG + +Q   +      S    VV V+  
Sbjct: 197 ISVSCGRSHTAAVTEKGEVWTWGNGYEGELGHGEKNSQ---YQPKKVQSLTEKVVDVACG 253

Query: 172 ENHAAFVLQSGQVFTCG--DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            +   FV +SG +++CG  D      G     R +  PR +          ++AG     
Sbjct: 254 RDFTIFVCESG-LYSCGADDYGQLGLGRSHGERFVQTPRSLSGTGLSDVVAISAGDYHVC 312

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
            L   G V+T G    GQLGHG+  D    K +  L     +VQ+A G  +  AVT +GV
Sbjct: 313 ALGRDGLVYTWGLGREGQLGHGEKADCSLAKPVDNLRNF-EIVQVACGGGHTAAVTKDGV 371

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSLC 347
           +Y++G G +  LG G    EL+  +I ++R   + V  + AG    V L S     LC
Sbjct: 372 LYTWGRGRDGQLGRG---GELE--SIASYRTSPVQVTSLPAGAVLYVTLGSDHSAVLC 424


>gi|304318007|ref|YP_003853152.1| S-layer domain-containing protein [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302779509|gb|ADL70068.1| S-layer domain protein [Thermoanaerobacterium thermosaccharolyticum
           DSM 571]
          Length = 479

 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 69/232 (29%), Positives = 112/232 (48%), Gaps = 16/232 (6%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G YHT+ + N  +V++ G + CG LG G  T + +    +     + VV ++A   H
Sbjct: 231 IAAGAYHTVALKNDGTVWAWGWNDCGQLGDGTTTNRTIP---VQVKGISDVVAIAAGMYH 287

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV-PCKQVTAGLNFTGFLTI 233
              +   G V+  GDN     G+ +T +  +    V+ +KG+   K + AG ++T  L  
Sbjct: 288 TVALKNDGTVWAWGDNEHDQLGN-ETTKEEYHSTPVQ-VKGISDVKAIAAGASYTVVLKN 345

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V   G N +G+LG G T +  TP  +  +  V +   IAAG  + + +  +G V+++
Sbjct: 346 DGTVWAWGVNEYGKLGDGTTNNSFTPVQVNGISNVKA---IAAGAYHTVVLKNDGTVWTW 402

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYV 344
           G      LG+G   D   P  +     KGI  V+ ++AG  H VAL + G V
Sbjct: 403 GYNHYGELGNGTTVDSSTPVQV-----KGISDVKAIAAGACHTVALKNDGTV 449



 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 8/204 (3%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + I  G YHT+ + N  +V++ G +    LG+   T +    T +     + V  ++A  
Sbjct: 279 VAIAAGMYHTVALKNDGTVWAWGDNEHDQLGN-ETTKEEYHSTPVQVKGISDVKAIAAGA 337

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           ++   +   G V+  G N     G   TN   F P  V  +  V  K + AG   T  L 
Sbjct: 338 SYTVVLKNDGTVWAWGVNEYGKLGDGTTNNS-FTPVQVNGISNV--KAIAAGAYHTVVLK 394

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G V T G N +G+LG+G T+D  TP  +  + +V +   IAAG  + +A+  +G V++
Sbjct: 395 NDGTVWTWGYNHYGELGNGTTVDSSTPVQVKGISDVKA---IAAGACHTVALKNDGTVWA 451

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQ 316
           +G      LG+G   D   P  ++
Sbjct: 452 WGCNYYGELGNGTAVDSSTPVQVK 475



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 62/128 (48%), Gaps = 7/128 (5%)

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG 277
            K + AG   T  L   G V   G N  GQLG G T +R  P  +  + +   VV IAAG
Sbjct: 228 VKAIAAGAYHTVALKNDGTVWAWGWNDCGQLGDGTTTNRTIPVQVKGISD---VVAIAAG 284

Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVV 336
             + +A+  +G V+++G   +  LG+    +E     +Q    KGI  V+ ++AG  + V
Sbjct: 285 MYHTVALKNDGTVWAWGDNEHDQLGNETTKEEYHSTPVQV---KGISDVKAIAAGASYTV 341

Query: 337 ALDSSGYV 344
            L + G V
Sbjct: 342 VLKNDGTV 349


>gi|356512860|ref|XP_003525133.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 437

 Score = 85.1 bits (209), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 67/229 (29%), Positives = 106/229 (46%), Gaps = 8/229 (3%)

Query: 116 ITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           +T G  HT+  S S   V+S G    G LGHG  +   +    I       + Q++  ++
Sbjct: 71  VTCGADHTMARSESGRDVYSWGWGDFGRLGHGDHSDLLIPHP-IKALQGLMIQQIACGDS 129

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H   V    QV + G N +   G   T      P+ ++  + +P K V AG   +  +T 
Sbjct: 130 HCLAVTMDSQVLSWGRNQNGELG-LGTAEDSLLPQKIQIFEEIPIKMVAAGAEHSVAITK 188

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G+++  G   +G LG GD  DR  P+ +    +   +  +A G  + + V+ +G +Y+ 
Sbjct: 189 DGNLYGWGWGRYGNLGLGDRNDRLLPEKVTV--DGDKMAMVACGWRHTICVSSSGGLYTN 246

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           G G    LGHG+  D L PR +Q    K   + +VS G  H +AL SSG
Sbjct: 247 GWGKYGQLGHGDFEDHLVPRKVQALSDK--FISQVSGGWRHSMALTSSG 293



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 65/179 (36%), Positives = 88/179 (49%), Gaps = 5/179 (2%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V+ VSA  +H+  +L    V + G       GH DT+  +F P  + AL G     VT G
Sbjct: 16  VLLVSAGASHSVALLSGNVVCSWGRGEDGQLGHGDTDDRLF-PTKLSALDGQDIICVTCG 74

Query: 225 LNFTGFLTIRGH-VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            + T   +  G  V++ G    G+LGHGD  D   P  I  L+ +  + QIA G S+ LA
Sbjct: 75  ADHTMARSESGRDVYSWGWGDFGRLGHGDHSDLLIPHPIKALQGL-MIQQIACGDSHCLA 133

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           VT +  V S+G   N  LG G   D L P+ IQ F    I +  V+AG EH VA+   G
Sbjct: 134 VTMDSQVLSWGRNQNGELGLGTAEDSLLPQKIQIFEE--IPIKMVAAGAEHSVAITKDG 190



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 93/209 (44%), Gaps = 7/209 (3%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  H++ I+ + +++  G    G LG G    + +   ++       +  V+    H
Sbjct: 176 VAAGAEHSVAITKDGNLYGWGWGRYGNLGLGDRNDRLLP-EKVTV-DGDKMAMVACGWRH 233

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V  SG ++T G       GH D    +  PR V+AL      QV+ G   +  LT  
Sbjct: 234 TICVSSSGGLYTNGWGKYGQLGHGDFEDHLV-PRKVQALSDKFISQVSGGWRHSMALTSS 292

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
           G +   G N  GQ+G G+  D  +P  +  P ++   V  I+ G  + +AVT    VYS+
Sbjct: 293 GQLLGWGWNKFGQIGVGNNFDCCSPMQVNFPHDQ--KVQMISCGWRHTIAVTERENVYSW 350

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           G G+N  LG+GE  D   P  I+ F   G
Sbjct: 351 GRGANGQLGNGETIDRNVPTIIEAFSVDG 379


>gi|47214261|emb|CAG01938.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1055

 Score = 85.1 bits (209), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 70/227 (30%), Positives = 101/227 (44%), Gaps = 19/227 (8%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHG-----PETTQCVSFTRINFPSAAHVVQVSASEN 173
           G++   L+ + SV++CGS+ CG LGH      PE    +   RI          VS  + 
Sbjct: 42  GQHSVFLLHDGSVYTCGSNGCGQLGHNKPGTSPELVGALDTQRITL--------VSCGQA 93

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  V + GQVF  G       G   T   +  PRL++ L      QV  G      L+ 
Sbjct: 94  HSMAVNEQGQVFAWGAGDGGQLGLGTTEAAVRIPRLIKRLCDHRIAQVMCGNQHCIALSK 153

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV--VQIAAGPSYMLAVTGNGVVY 291
            G + T G NT GQLG G     P+     PL+ +  +   +I AG  +  A++ +G V+
Sbjct: 154 DGQLFTWGQNTSGQLGLGK--GEPSKLFPQPLKSLAGIPLAKITAGGDHSFALSLSGAVF 211

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            +G      LG  +  D   P  I+  R +   VV +S GDEH  AL
Sbjct: 212 GWGKNKAGQLGLNDIQDRAVPCHIKFLRSQ--KVVHISCGDEHTAAL 256



 Score = 67.4 bits (163), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 52/173 (30%), Positives = 88/173 (50%), Gaps = 8/173 (4%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+ F+L  G V+TCG N    CG    N+P   P LV AL       V+ G   +  +  
Sbjct: 44  HSVFLLHDGSVYTCGSNG---CGQLGHNKPGTSPELVGALDTQRITLVSCGQAHSMAVNE 100

Query: 234 RGHVHTCGSNTHGQLGHGDT-LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
           +G V   G+   GQLG G T      P+ I  L +   + Q+  G  + +A++ +G +++
Sbjct: 101 QGQVFAWGAGDGGQLGLGTTEAAVRIPRLIKRLCD-HRIAQVMCGNQHCIALSKDGQLFT 159

Query: 293 FGSGSNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           +G  ++  LG G+ +  +L P+ +++    GI + +++AG +H  AL  SG V
Sbjct: 160 WGQNTSGQLGLGKGEPSKLFPQPLKSL--AGIPLAKITAGGDHSFALSLSGAV 210



 Score = 58.5 bits (140), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 71/142 (50%), Gaps = 10/142 (7%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP--TPKS 261
           +F PR      G   K+   G   + FL   G V+TCGSN  GQLGH    ++P  +P+ 
Sbjct: 21  MFEPRNCNVFSGRGLKEAVCGGQHSVFLLHDGSVYTCGSNGCGQLGH----NKPGTSPEL 76

Query: 262 IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRR 320
           +  L +   +  ++ G ++ +AV   G V+++G+G    LG G     ++ PR I+  R 
Sbjct: 77  VGAL-DTQRITLVSCGQAHSMAVNEQGQVFAWGAGDGGQLGLGTTEAAVRIPRLIK--RL 133

Query: 321 KGIHVVRVSAGDEHVVALDSSG 342
               + +V  G++H +AL   G
Sbjct: 134 CDHRIAQVMCGNQHCIALSKDG 155



 Score = 52.0 bits (123), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 72/244 (29%), Positives = 104/244 (42%), Gaps = 36/244 (14%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           +IT G  H+  +S S +VF  G +  G LG      + V    I F  +  VV +S  + 
Sbjct: 193 KITAGGDHSFALSLSGAVFGWGKNKAGQLGLNDIQDRAVP-CHIKFLRSQKVVHISCGDE 251

Query: 174 HAAFVLQ-----SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
           H A + +     + Q F          G R +N P F  R       + C   T  +   
Sbjct: 252 HTAALTKVRIRSASQCFRTS-------GGRCSN-PFFCQR-------IGCSHSTR-VTIL 295

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLAVT-G 286
            +L   G + T G  + GQLGHG T +   P+ +  LE +G+ V QI  G  + LA    
Sbjct: 296 LWLFQDGGLFTFGDGSWGQLGHGSTSNELLPRRV--LELMGTEVSQITCGRHHTLAFAPS 353

Query: 287 NGVVYSFGSGSNFCLGHGEQHDE--LQPRAIQTF-------RRKGIHVVRVSAGDEHVVA 337
           +GVVY+FG  S+  LG GE   E  L P  I            K   V +++ G +H   
Sbjct: 354 SGVVYAFGGNSHGQLGTGELSAEKCLYPVKINLLSGNNHRTDSKKYSVTKITCGGDHSFL 413

Query: 338 LDSS 341
           L S+
Sbjct: 414 LYSN 417


>gi|268569112|ref|XP_002640436.1| Hypothetical protein CBG08488 [Caenorhabditis briggsae]
          Length = 985

 Score = 85.1 bits (209), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 69/231 (29%), Positives = 111/231 (48%), Gaps = 13/231 (5%)

Query: 109 TSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ 167
           +  G +QI  GR H+L +++   VF+ GS+  G LG     T      RIN      VVQ
Sbjct: 61  SGVGIVQIAAGRAHSLAVADDGRVFAWGSNEHGQLGMENTITWQEMPKRIN--QLNEVVQ 118

Query: 168 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
           V++  +H   + + G+V+  G+ +   C H         P LVE L  +P  +V AG   
Sbjct: 119 VASGSDHCIALTEDGRVYVWGEQADGRCIHH--------PELVEHLNAIPIVRVEAGARH 170

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
              ++  G V T G N  G+LG  D   + +   +  ++ +G VV+ A G ++ + +T  
Sbjct: 171 CVAISASGAVFTWGQNNSGELGMDDFRPQTSVHHVTQMDGLG-VVEAACGDNHTILLTHC 229

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           G  +SFGS +    G G++  E +P         G HV R++AG  H +A+
Sbjct: 230 GRTFSFGSDALGQCGFGKKL-EKRPNPTAVSDLIGSHVTRIAAGACHTIAI 279



 Score = 72.4 bits (176), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 72/239 (30%), Positives = 107/239 (44%), Gaps = 27/239 (11%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+ +G  H + L  +  V+  G    G   H PE  + ++        A  +V+V A  
Sbjct: 117 VQVASGSDHCIALTEDGRVYVWGEQADGRCIHHPELVEHLN--------AIPIVRVEAGA 168

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRL----VEALKGVPCKQVTAGLNFT 228
            H   +  SG VFT G N+S   G  D     FRP+     V  + G+   +   G N T
Sbjct: 169 RHCVAISASGAVFTWGQNNSGELGMDD-----FRPQTSVHHVTQMDGLGVVEAACGDNHT 223

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGS-VVQIAAGPSYMLAVTG 286
             LT  G   + GS+  GQ G G  L+ RP P +++ L  +GS V +IAAG  + +A+  
Sbjct: 224 ILLTHCGRTFSFGSDALGQCGFGKKLEKRPNPTAVSDL--IGSHVTRIAAGACHTIAII- 280

Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVS 345
            G  Y FG  S+  LG+G+   +  PR          HV  V AG      + S+G + 
Sbjct: 281 RGSPYPFGLNSSGQLGNGKIMTQSTPRKTDDLD----HVTAVFAGYHQTFFIRSAGSIE 335



 Score = 72.0 bits (175), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 58/182 (31%), Positives = 86/182 (47%), Gaps = 15/182 (8%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  V+  E H  F+ +  ++++ G N     G    +   F    V    GV   Q+ AG
Sbjct: 12  VKAVACGEQHTIFLTKDRKMWSVGSNVDGQLGRGKRSEGSFSIYPVSLTSGVGIVQIAAG 71

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
              +  +   G V   GSN HGQLG  +T+  +  PK I  L E   VVQ+A+G  + +A
Sbjct: 72  RAHSLAVADDGRVFAWGSNEHGQLGMENTITWQEMPKRINQLNE---VVQVASGSDHCIA 128

Query: 284 VTGNGVVYSFGSGSN-FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           +T +G VY +G  ++  C+ H E  + L            I +VRV AG  H VA+ +SG
Sbjct: 129 LTEDGRVYVWGEQADGRCIHHPELVEHLN----------AIPIVRVEAGARHCVAISASG 178

Query: 343 YV 344
            V
Sbjct: 179 AV 180



 Score = 54.7 bits (130), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 48/134 (35%), Positives = 65/134 (48%), Gaps = 11/134 (8%)

Query: 215 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV--V 272
           G   K V  G   T FLT    + + GSN  GQLG G   +     SI P+     V  V
Sbjct: 9   GTAVKAVACGEQHTIFLTKDRKMWSVGSNVDGQLGRGKRSEGSF--SIYPVSLTSGVGIV 66

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ--PRAIQTFRRKGIHVVRVSA 330
           QIAAG ++ LAV  +G V+++GS  +  LG  E     Q  P+ I         VV+V++
Sbjct: 67  QIAAGRAHSLAVADDGRVFAWGSNEHGQLGM-ENTITWQEMPKRINQLN----EVVQVAS 121

Query: 331 GDEHVVALDSSGYV 344
           G +H +AL   G V
Sbjct: 122 GSDHCIALTEDGRV 135


>gi|50511409|gb|AAT77332.1| unknown prtein [Oryza sativa Japonica Group]
          Length = 901

 Score = 85.1 bits (209), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 60/193 (31%), Positives = 98/193 (50%), Gaps = 9/193 (4%)

Query: 150 QCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHR-DTNRPIFRPR 208
            C+    + F     V  +S    HA  V + G++++ G+ S    GH  D + P  +P+
Sbjct: 297 DCLIPKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVP--QPK 354

Query: 209 LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APL 265
           L++AL  +  + V  G   T  +T+ G ++T G+ T   G LGHG+ +    PK +  PL
Sbjct: 355 LIDALANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPL 414

Query: 266 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
           E +  V  I+ GP +   VT  G +++FG GS   LGHG++     PR +++   KG+  
Sbjct: 415 EGI-HVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESL--KGLRT 471

Query: 326 VRVSAGDEHVVAL 338
           VR + G  H  A+
Sbjct: 472 VRAACGVWHTAAV 484



 Score = 77.8 bits (190), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 105/230 (45%), Gaps = 28/230 (12%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           I+ G +HT +++++  +F+ G    GVLGHG    Q +S  R +        V+ +    
Sbjct: 422 ISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDR--QSLSVPREVESLKGLRTVRAACGVW 479

Query: 174 HAAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
           H A V++            SG++FT GD      GH D +  +  P  V AL      Q+
Sbjct: 480 HTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLV-PTCVAALVEPNFCQI 538

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAA 276
             G   T  LT  GHV+T GS  +GQLG+      P    + P+   G      V +I+ 
Sbjct: 539 ACGHCMTVALTTSGHVYTMGSPVYGQLGN------PQADGMLPVRVEGKLHKNFVEEISC 592

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
           G  ++  +T    VY++G G+N  LGHG+  D   P  ++  + K +  V
Sbjct: 593 GAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRSSPTLVEALKDKQVRTV 642



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 62/245 (25%), Positives = 104/245 (42%), Gaps = 28/245 (11%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHG-----PETTQCVSFTRINFPSAAHVVQVSASEN 173
           GR+ TL+     ++S G    G LGHG     P+     +   +N      +  V+  E 
Sbjct: 319 GRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALANMN------IELVACGEY 372

Query: 174 HAAFVLQSGQVFTCGDNSSFC--CGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           H   V  SG ++T G+ +S     GH +        R+   L+G+    ++ G   T  +
Sbjct: 373 HTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLEGIHVSAISCGPWHTAIV 432

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT------ 285
           T  G + T G  + G LGHGD      P+ +  L+ +   V+ A G  +  AV       
Sbjct: 433 TSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLKGL-RTVRAACGVWHTAAVVEVMVGN 491

Query: 286 ------GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
                  +G ++++G G    LGHG++   L P  +        +  +++ G    VAL 
Sbjct: 492 SSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALVEP--NFCQIACGHCMTVALT 549

Query: 340 SSGYV 344
           +SG+V
Sbjct: 550 TSGHV 554



 Score = 48.5 bits (114), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 48/193 (24%), Positives = 84/193 (43%), Gaps = 10/193 (5%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQC 151
           R +R    V H++ +VE       +  G   +   S+  +F+ G    G LGHG + T+ 
Sbjct: 470 RTVRAACGVWHTAAVVE-------VMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRL 522

Query: 152 VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE 211
           V  T +      +  Q++        +  SG V+T G       G+   +  +   R+  
Sbjct: 523 VP-TCVAALVEPNFCQIACGHCMTVALTTSGHVYTMGSPVYGQLGNPQADG-MLPVRVEG 580

Query: 212 ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV 271
            L     ++++ G      LT R  V+T G   +G+LGHGDT DR +P  +  L++   V
Sbjct: 581 KLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRSSPTLVEALKD-KQV 639

Query: 272 VQIAAGPSYMLAV 284
             +  G ++  A+
Sbjct: 640 RTVVCGINFTAAI 652



 Score = 42.4 bits (98), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 3/124 (2%)

Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI  G   T+ ++ S  V++ GS + G LG+ P+    +            V ++S    
Sbjct: 537 QIACGHCMTVALTTSGHVYTMGSPVYGQLGN-PQADGMLPVRVEGKLHKNFVEEISCGAY 595

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H A +    +V+T G  ++   GH DT+     P LVEALK    + V  G+NFT  + I
Sbjct: 596 HVAVLTSRTEVYTWGKGANGRLGHGDTDD-RSSPTLVEALKDKQVRTVVCGINFTAAICI 654

Query: 234 RGHV 237
              V
Sbjct: 655 HKWV 658


>gi|410957218|ref|XP_003985228.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Felis catus]
          Length = 932

 Score = 85.1 bits (209), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 61/181 (33%), Positives = 90/181 (49%), Gaps = 4/181 (2%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           ++QVS    H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG
Sbjct: 21  ILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAG 80

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
              +  L++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +
Sbjct: 81  GAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVK-LLRTQKVVYISCGEEHTAVL 139

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGY 343
           T +G V++FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG 
Sbjct: 140 TKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGL 197

Query: 344 V 344
           +
Sbjct: 198 I 198



 Score = 71.2 bits (173), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 65/195 (33%), Positives = 96/195 (49%), Gaps = 8/195 (4%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++ G +H L L ++   F+ G +  G LG G E     S  R+       + QV+A  
Sbjct: 22  LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGG 81

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
            H+  +  SG VF  G N++   G  D  +R    P  V+ L+      ++ G   T  L
Sbjct: 82  AHSFALSLSGAVFGWGMNNAGQLGLSDEEDRE--SPCHVKLLRTQKVVYISCGEEHTAVL 139

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGNGV 289
           T  G V T G+ + GQLGH    D   P+ +  LE +GS V QIA G  + LA V  +G+
Sbjct: 140 TKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGL 197

Query: 290 VYSFGSGSNFCLGHG 304
           +Y+FG G+   LG G
Sbjct: 198 IYAFGCGARGQLGTG 212



 Score = 63.9 bits (154), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 69/137 (50%), Gaps = 4/137 (2%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPL 265
           PRL++ L      QV+ G      L   G   T G N+HGQLG G     + +P+ +  L
Sbjct: 10  PRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL 69

Query: 266 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
           E +  + Q+AAG ++  A++ +G V+ +G  +   LG  ++ D   P  ++  R +   V
Sbjct: 70  EGI-PLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQ--KV 126

Query: 326 VRVSAGDEHVVALDSSG 342
           V +S G+EH   L  SG
Sbjct: 127 VYISCGEEHTAVLTKSG 143


>gi|255562792|ref|XP_002522401.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223538286|gb|EEF39893.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1042

 Score = 85.1 bits (209), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 55/166 (33%), Positives = 82/166 (49%), Gaps = 5/166 (3%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           HA  V + G++F+ G+ S    GH      +  P+L++ L G+  + V  G N T  +T 
Sbjct: 309 HAVLVTKPGEIFSWGEESGGRLGH-GIKADVPNPKLIDTLAGMNIELVACGENHTCAVTF 367

Query: 234 RGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++T G   +  G LGHG       PK I    E   V  ++ GP +  AVT  G ++
Sbjct: 368 SGDLYTWGDGAYNCGLLGHGSEASHWIPKRIGGDMEGIHVSYVSCGPWHTAAVTSVGQLF 427

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           +FG G+   LGHG+      PR ++T R  G+  +RVS G  H  A
Sbjct: 428 TFGDGTFGALGHGDHSSATVPREVETLR--GLRTIRVSCGVWHTAA 471



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 81/276 (29%), Positives = 123/276 (44%), Gaps = 34/276 (12%)

Query: 101 EHSSDIVETSAGNMQ------ITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVS 153
           E S  I +   G+M+      ++ G +HT  +++   +F+ G    G LGHG  ++  V 
Sbjct: 389 EASHWIPKRIGGDMEGIHVSYVSCGPWHTAAVTSVGQLFTFGDGTFGALGHGDHSSATVP 448

Query: 154 FTRINFPSAAHVVQVSASENHAAFVLQS---------------GQVFTCGDNSSFCCGHR 198
              +        ++VS    H A  ++                G++FT G+   +  GH 
Sbjct: 449 -REVETLRGLRTIRVSCGVWHTAAAVEITTESSSPGGSGSSTFGKLFTWGNGDEYRLGHG 507

Query: 199 DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT 258
           D    +F P  V AL      QV  G N T  LT  G V+T GS ++GQLG+     R T
Sbjct: 508 DKEPRLF-PECVVALGDENICQVACGHNLTLALTAAGRVYTMGSTSYGQLGN----PRAT 562

Query: 259 PKSIAPLEE--VGSVVQIAAGPSYMLAV-TGNGVVYSFGSGSNFCLGHGEQHDELQPRAI 315
            K  A +E    G +++  A  SY +AV T    VY++G G+N  LGHG+  D  QP  +
Sbjct: 563 GKVPAIVEGKIAGKIIEEIACGSYHVAVLTSKAEVYTWGKGTNGQLGHGDNKDRNQPTVV 622

Query: 316 QTFRRKGIHVVRVSAGDEHVVALD---SSGYVSLCS 348
              R K +  V   +    ++ L    SS   S+CS
Sbjct: 623 DFLRDKQVRAVACGSNFTAIICLHKWVSSADHSVCS 658


>gi|428184753|gb|EKX53607.1| hypothetical protein GUITHDRAFT_160884 [Guillardia theta CCMP2712]
          Length = 308

 Score = 85.1 bits (209), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 60/192 (31%), Positives = 91/192 (47%), Gaps = 10/192 (5%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
           +F  G S  G LG G +  +    T I  P    V+ VS  +    FV +SG+V++ GDN
Sbjct: 105 LFVSGWSNSGALGLGKDVVKAKQPTEIPIPEP--VIDVSCGKKFTVFVTESGKVYSMGDN 162

Query: 191 SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC---GSNTH-- 245
            +   G+ +     + P +V  L G+   ++ AG      L+  G V++    GS T   
Sbjct: 163 KNGELGNPNAGSSSYEPTIVHGLDGIKIVKIAAGQYHVLALSDIGEVYSWGWGGSGTPGA 222

Query: 246 --GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 303
             G LGHGD    P PK I  L     +  I+ G  + +A++ +G ++++G G    LGH
Sbjct: 223 GVGALGHGDKASLPVPKRIERLNGE-KITNISCGAKHSVALSQDGTMFTWGHGEQGRLGH 281

Query: 304 GEQHDELQPRAI 315
           G   D LQP  I
Sbjct: 282 GNNTDFLQPEPI 293



 Score = 46.6 bits (109), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 40/164 (24%), Positives = 76/164 (46%), Gaps = 13/164 (7%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + ++ G+  T+ ++ S  V+S G +  G LG+    +     T ++      +V+++A +
Sbjct: 138 IDVSCGKKFTVFVTESGKVYSMGDNKNGELGNPNAGSSSYEPTIVHGLDGIKIVKIAAGQ 197

Query: 173 NHAAFVLQSGQVFTCGDNSSF-------CCGHRD-TNRPIFRPRLVEALKGVPCKQVTAG 224
            H   +   G+V++ G   S          GH D  + P+  P+ +E L G     ++ G
Sbjct: 198 YHVLALSDIGEVYSWGWGGSGTPGAGVGALGHGDKASLPV--PKRIERLNGEKITNISCG 255

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD--RPTPKSIAPLE 266
              +  L+  G + T G    G+LGHG+  D  +P P S +P+ 
Sbjct: 256 AKHSVALSQDGTMFTWGHGEQGRLGHGNNTDFLQPEPISESPVR 299



 Score = 44.3 bits (103), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 54/119 (45%), Gaps = 5/119 (4%)

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
           F+      G +   G +  G LG G  + +    +  P+ E   V+ ++ G  + + VT 
Sbjct: 95  FSSMQNKAGKLFVSGWSNSGALGLGKDVVKAKQPTEIPIPE--PVIDVSCGKKFTVFVTE 152

Query: 287 NGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           +G VYS G   N  LG+        +P  +      GI +V+++AG  HV+AL   G V
Sbjct: 153 SGKVYSMGDNKNGELGNPNAGSSSYEPTIVHGL--DGIKIVKIAAGQYHVLALSDIGEV 209


>gi|147782117|emb|CAN67581.1| hypothetical protein VITISV_010346 [Vitis vinifera]
          Length = 423

 Score = 85.1 bits (209), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 109/231 (47%), Gaps = 19/231 (8%)

Query: 114 MQITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS 171
           + +T G  HT   S S   V+S G  L       P+  + +   RI         Q++  
Sbjct: 71  VSVTCGADHTTAYSESFTQVYSWGCDL-----FTPQPIKALHGLRIK--------QIACG 117

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           ++H   V   G+V + G N +   G   T   +  P+ ++A +GV  K V AG   T  +
Sbjct: 118 DSHCLAVTMDGEVQSWGRNQNGQLGLGTTEDSLV-PQKIQAFQGVSVKMVAAGAEHTAAV 176

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           T  G ++  G   +G LG GD  DR  P+ ++ +E V  +V++A G  + ++V+ +G +Y
Sbjct: 177 TEDGELYGWGWGRYGNLGLGDRNDRLVPEKVSTVEGV-KMVKVACGWRHTISVSSSGGLY 235

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           ++G      LGHG+  D L P  ++  +   I    +S G  H +AL S G
Sbjct: 236 TYGWSKYGQLGHGDFEDHLTPHKLEALQENLIS--EISGGWRHTMALTSDG 284



 Score = 78.6 bits (192), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 98/209 (46%), Gaps = 6/209 (2%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HT  ++ +  ++  G    G LG G    + V   +++      +V+V+    H
Sbjct: 166 VAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRNDRLVP-EKVSTVEGVKMVKVACGWRH 224

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V  SG ++T G +     GH D    +  P  +EAL+     +++ G   T  LT  
Sbjct: 225 TISVSSSGGLYTYGWSKYGQLGHGDFEDHL-TPHKLEALQENLISEISGGWRHTMALTSD 283

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
           G ++  G N  GQ+G GD +D  +P  +  P E+   VV I+ G  + LAVT    V+S+
Sbjct: 284 GKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPHEQ--KVVHISCGWRHTLAVTERQNVFSW 341

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           G G+N  LGHGE  D   P+ I+     G
Sbjct: 342 GRGTNGQLGHGESIDRNIPKMIEVLSADG 370



 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 58/178 (32%), Positives = 81/178 (45%), Gaps = 15/178 (8%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V+ +SA  +H+  +L    V + G       GH D    +  P  + AL G     VT G
Sbjct: 18  VLLISAGASHSVALLXGNVVCSWGRGEDGQLGHGDAEDRL-SPTYLSALDGHEVVSVTCG 76

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
            + T          T  S +  Q+ +    D  TP+ I  L  +  + QIA G S+ LAV
Sbjct: 77  ADHT----------TAYSESFTQV-YSWGCDLFTPQPIKALHGL-RIKQIACGDSHCLAV 124

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           T +G V S+G   N  LG G   D L P+ IQ F  +G+ V  V+AG EH  A+   G
Sbjct: 125 TMDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAF--QGVSVKMVAAGAEHTAAVTEDG 180



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 74/158 (46%), Gaps = 3/158 (1%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G  HT+ +S+S  +++ G S  G LGHG +    ++  ++       + ++S   
Sbjct: 216 VKVACGWRHTISVSSSGGLYTYGWSKYGQLGHG-DFEDHLTPHKLEALQENLISEISGGW 274

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H   +   G+++  G N     G  D N     P  V+         ++ G   T  +T
Sbjct: 275 RHTMALTSDGKLYGWGWNKFGQVGVGD-NVDHCSPVQVKFPHEQKVVHISCGWRHTLAVT 333

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 270
            R +V + G  T+GQLGHG+++DR  PK I  L   GS
Sbjct: 334 ERQNVFSWGRGTNGQLGHGESIDRNIPKMIEVLSADGS 371


>gi|357470133|ref|XP_003605351.1| Serine/threonine protein kinase Nek9 [Medicago truncatula]
 gi|355506406|gb|AES87548.1| Serine/threonine protein kinase Nek9 [Medicago truncatula]
          Length = 1096

 Score = 85.1 bits (209), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 72/246 (29%), Positives = 116/246 (47%), Gaps = 22/246 (8%)

Query: 114 MQITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G +H+ L  SN  +F+ G    GVLGHG +  + V + + +   S    V+V+  
Sbjct: 201 VSVACGSWHSALATSNGKLFTFGDGTFGVLGHGDQ--ESVMYPKEVQLLSGLKTVKVACG 258

Query: 172 ENHAAFVLQ----------SGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQ 220
             H A +++          S ++FT GD   F  GH   N+ ++ +P  V  L     +Q
Sbjct: 259 VWHTAAIIEVAFQSGSNASSWKLFTWGDGDKFRLGH--GNKDMYLKPTRVSPLIEYNFQQ 316

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAGPS 279
           +  G   T  LT  GHV T GS  +GQLG+ +   + PT      L E   + +I+ G  
Sbjct: 317 IACGHTMTVALTTSGHVFTMGSTENGQLGNPNAAGKVPTLVQDKLLGEF--IEEISCGAH 374

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
           ++ AVT    +Y++G GSN  LGHG+  D   P  +   + +  H+  +S G      + 
Sbjct: 375 HVAAVTSRSELYTWGKGSNGRLGHGDTDDRKSPTLVLALKDR--HLKNISCGSNFTSCVC 432

Query: 340 SSGYVS 345
           +  YVS
Sbjct: 433 NQKYVS 438



 Score = 75.1 bits (183), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 54/167 (32%), Positives = 81/167 (48%), Gaps = 5/167 (2%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H A V + G+VFT G+ S    GH   ++   +P LVE    V    V  G   T  ++ 
Sbjct: 102 HLAIVSREGKVFTWGEESGGRLGH-GIDKDFGKPHLVEFPDVVTLDIVACGEFHTSAVSK 160

Query: 234 RGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
             +  T G  TH  G LGHG+ +    PKS+    +   VV +A G  +    T NG ++
Sbjct: 161 CDNFFTWGDGTHNVGLLGHGNEISHWIPKSVNGFLDGLRVVSVACGSWHSALATSNGKLF 220

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           +FG G+   LGHG+Q   + P+ +Q     G+  V+V+ G  H  A+
Sbjct: 221 TFGDGTFGVLGHGDQESVMYPKEVQLL--SGLKTVKVACGVWHTAAI 265



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 107/238 (44%), Gaps = 17/238 (7%)

Query: 116 ITTGRYHTLLIS---NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +  G +HT  +S   N   +  G+   G+LGHG E +  +  +   F     VV V+   
Sbjct: 148 VACGEFHTSAVSKCDNFFTWGDGTHNVGLLGHGNEISHWIPKSVNGFLDGLRVVSVACGS 207

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT---- 228
            H+A    +G++FT GD +    GH D    +  P+ V+ L G+   +V  G+  T    
Sbjct: 208 WHSALATSNGKLFTFGDGTFGVLGHGD-QESVMYPKEVQLLSGLKTVKVACGVWHTAAII 266

Query: 229 ------GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
                 G       + T G     +LGHG+      P  ++PL E  +  QIA G +  +
Sbjct: 267 EVAFQSGSNASSWKLFTWGDGDKFRLGHGNKDMYLKPTRVSPLIEY-NFQQIACGHTMTV 325

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           A+T +G V++ GS  N  LG+     ++ P  +Q  +  G  +  +S G  HV A+ S
Sbjct: 326 ALTTSGHVFTMGSTENGQLGNPNAAGKV-PTLVQD-KLLGEFIEEISCGAHHVAAVTS 381



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/245 (25%), Positives = 100/245 (40%), Gaps = 23/245 (9%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSAS 171
           I +G +H  ++S    VF+ G    G LGHG +      F +   + FP    +  V+  
Sbjct: 96  IVSGTHHLAIVSREGKVFTWGEESGGRLGHGIDK----DFGKPHLVEFPDVVTLDIVACG 151

Query: 172 ENHAAFVLQSGQVFTCGDNSSFC--CGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
           E H + V +    FT GD +      GH +         +   L G+    V  G   + 
Sbjct: 152 EFHTSAVSKCDNFFTWGDGTHNVGLLGHGNEISHWIPKSVNGFLDGLRVVSVACGSWHSA 211

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV----- 284
             T  G + T G  T G LGHGD      PK +  L  +   V++A G  +  A+     
Sbjct: 212 LATSNGKLFTFGDGTFGVLGHGDQESVMYPKEVQLLSGL-KTVKVACGVWHTAAIIEVAF 270

Query: 285 -----TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
                  +  ++++G G  F LGHG +   L+P  +           +++ G    VAL 
Sbjct: 271 QSGSNASSWKLFTWGDGDKFRLGHGNKDMYLKPTRVSPLIEYNFQ--QIACGHTMTVALT 328

Query: 340 SSGYV 344
           +SG+V
Sbjct: 329 TSGHV 333



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/143 (25%), Positives = 69/143 (48%), Gaps = 4/143 (2%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PRL+E+   +  + + +G +    ++  G V T G  + G+LGHG   D   P  + 
Sbjct: 79  VLTPRLLESTVVLDVRDIVSGTHHLAIVSREGKVFTWGEESGGRLGHGIDKDFGKPH-LV 137

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRK 321
              +V ++  +A G  +  AV+     +++G G++    LGHG +     P+++  F   
Sbjct: 138 EFPDVVTLDIVACGEFHTSAVSKCDNFFTWGDGTHNVGLLGHGNEISHWIPKSVNGF-LD 196

Query: 322 GIHVVRVSAGDEHVVALDSSGYV 344
           G+ VV V+ G  H     S+G +
Sbjct: 197 GLRVVSVACGSWHSALATSNGKL 219


>gi|334183781|ref|NP_177129.2| regulator of chromosome condensation and FYVE zinc finger
           domain-containing protein [Arabidopsis thaliana]
 gi|332196844|gb|AEE34965.1| regulator of chromosome condensation and FYVE zinc finger
           domain-containing protein [Arabidopsis thaliana]
          Length = 1041

 Score = 85.1 bits (209), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 73/250 (29%), Positives = 111/250 (44%), Gaps = 31/250 (12%)

Query: 101 EHSSDIVETSAGNMQ------ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVS 153
           E S  I +   G++Q      +  G +HT ++++S  +F+ G    G LGHG   +  V 
Sbjct: 391 ESSCWIPKRVTGDLQGLYVSDVACGPWHTAVVASSGQLFTFGDGTFGALGHGDRRSTSVP 450

Query: 154 ----------FTRI--NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN 201
                      T++       A VV+V+   + A      GQVFT GD      GH D +
Sbjct: 451 REVESLIGLIVTKVACGVWHTAAVVEVTNEASEAEVDSSRGQVFTWGDGEKGQLGHGDND 510

Query: 202 RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 261
             +  P  V +L      QV  G + T   T RGHV+T GS  +GQLG+      PT K 
Sbjct: 511 TKLL-PECVISLTNENICQVACGHSLTVSRTSRGHVYTMGSTAYGQLGN------PTAKG 563

Query: 262 IAPLEEVGSVVQ-----IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
             P    G +V+     IA G  ++  +T    +Y++G G N  LGHG   ++ +P  + 
Sbjct: 564 NFPERVEGDIVEASVEEIACGSYHVAVLTSKSEIYTWGKGLNGQLGHGNVENKREPAVVG 623

Query: 317 TFRRKGIHVV 326
             R K +  +
Sbjct: 624 FLREKQVKAI 633



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 55/228 (24%), Positives = 98/228 (42%), Gaps = 11/228 (4%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN----- 173
           G YH    +   VF  G S+   +  G   +   +      P A     V  ++N     
Sbjct: 250 GSYHEDFDALGDVFVWGESISDGVLSGTGNSLNSTTEDALLPKALESTIVLDAQNIACGK 309

Query: 174 -HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            HA  V + G++F+ G+                +P+ + +++G+  K +  G   T  +T
Sbjct: 310 CHAVLVTKQGEIFSWGEGKGGK-LGHGLETDAQKPKFISSVRGLGFKSLACGDFHTCAIT 368

Query: 233 IRGHVHTCGSNTHG--QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
             G +++ G  TH    LGHG+      PK +    +   V  +A GP +   V  +G +
Sbjct: 369 QSGDLYSWGDGTHNVDLLGHGNESSCWIPKRVTGDLQGLYVSDVACGPWHTAVVASSGQL 428

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           ++FG G+   LGHG++     PR +++    G+ V +V+ G  H  A+
Sbjct: 429 FTFGDGTFGALGHGDRRSTSVPREVESL--IGLIVTKVACGVWHTAAV 474



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 87/341 (25%), Positives = 139/341 (40%), Gaps = 46/341 (13%)

Query: 26  RLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNR 85
           R S  D   L L+S     SHG Y + F +L D+          + +G          N 
Sbjct: 229 RFSTNDPFRLSLSSAVSTSSHGSYHEDFDALGDVFVWGESISDGVLSGTG--------NS 280

Query: 86  CNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGH 144
            N   +  L  L     S+ +++       I  G+ H +L++    +FS G    G LGH
Sbjct: 281 LNSTTEDAL--LPKALESTIVLDA----QNIACGKCHAVLVTKQGEIFSWGEGKGGKLGH 334

Query: 145 GPETT----QCVSFTR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFC--CGH 197
           G ET     + +S  R + F S A        + H   + QSG +++ GD +      GH
Sbjct: 335 GLETDAQKPKFISSVRGLGFKSLA------CGDFHTCAITQSGDLYSWGDGTHNVDLLGH 388

Query: 198 RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP 257
            + +      R+   L+G+    V  G   T  +   G + T G  T G LGHGD     
Sbjct: 389 GNESSCWIPKRVTGDLQGLYVSDVACGPWHTAVVASSGQLFTFGDGTFGALGHGDRRSTS 448

Query: 258 TPKSIAPLEEVGSVV-QIAAGPSYMLAV-------------TGNGVVYSFGSGSNFCLGH 303
            P+ +  L  +G +V ++A G  +  AV             +  G V+++G G    LGH
Sbjct: 449 VPREVESL--IGLIVTKVACGVWHTAAVVEVTNEASEAEVDSSRGQVFTWGDGEKGQLGH 506

Query: 304 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G+   +L P  + +   + I   +V+ G    V+  S G+V
Sbjct: 507 GDNDTKLLPECVISLTNENI--CQVACGHSLTVSRTSRGHV 545


>gi|255540989|ref|XP_002511559.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223550674|gb|EEF52161.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1028

 Score = 85.1 bits (209), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 50/173 (28%), Positives = 92/173 (53%), Gaps = 5/173 (2%)

Query: 168 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
           ++    HA  V + GQ+F+ G++S    GH   +  + +P++++AL       V  G   
Sbjct: 303 IACGSKHAVIVTKQGQIFSWGESSGGKLGH-GADADVSQPKVIDALSESNVVLVACGEFH 361

Query: 228 TGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
           T  +T+ G+++T G +TH  G LGHG  +    P+ +    E   +  ++ GP +  AV+
Sbjct: 362 TCAVTVSGNLYTWGDDTHNTGYLGHGSAVSHWIPREVIGQIESVRISFVSCGPWHTAAVS 421

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             G +++FG G+   LGHG++    +PR +++   KG+  ++VS G  H  A+
Sbjct: 422 SQGKLFTFGDGTFGALGHGDRSSTSKPREVESL--KGLRTLKVSCGIWHTAAV 472



 Score = 77.4 bits (189), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 70/244 (28%), Positives = 110/244 (45%), Gaps = 21/244 (8%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSL--CGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +  G +HT  ++ S ++++ G      G LGHG   +  +    I    +  +  VS   
Sbjct: 355 VACGEFHTCAVTVSGNLYTWGDDTHNTGYLGHGSAVSHWIPREVIGQIESVRISFVSCGP 414

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL- 231
            H A V   G++FT GD +    GH D +    +PR VE+LKG+   +V+ G+  T  + 
Sbjct: 415 WHTAAVSSQGKLFTFGDGTFGALGHGDRSS-TSKPREVESLKGLRTLKVSCGIWHTAAVI 473

Query: 232 -----------TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
                      ++ G + T G+   GQLGHGD   R  P  ++       V Q+A   S 
Sbjct: 474 DFINESDRLDTSLSGKLFTWGAGERGQLGHGDEEPRLVPSCVS---MPAGVCQVACAHSM 530

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            +A+T  G VY+ G+     LG      +L        R    H+ +++ G  HVVAL S
Sbjct: 531 TIALTVLGQVYTMGAADYGQLGSPCSVGKLPIHTDGDIR--NCHIKQIACGSHHVVALSS 588

Query: 341 SGYV 344
           +G V
Sbjct: 589 NGDV 592



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/216 (26%), Positives = 100/216 (46%), Gaps = 19/216 (8%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           I  G  H ++++    +FS G S  G LGHG +    VS  + I+  S ++VV V+  E 
Sbjct: 303 IACGSKHAVIVTKQGQIFSWGESSGGKLGHGADAD--VSQPKVIDALSESNVVLVACGEF 360

Query: 174 HAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           H   V  SG ++T GD++  +   GH           ++  ++ V    V+ G   T  +
Sbjct: 361 HTCAVTVSGNLYTWGDDTHNTGYLGHGSAVSHWIPREVIGQIESVRISFVSCGPWHTAAV 420

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG----- 286
           + +G + T G  T G LGHGD      P+ +  L+ +   ++++ G  +  AV       
Sbjct: 421 SSQGKLFTFGDGTFGALGHGDRSSTSKPREVESLKGL-RTLKVSCGIWHTAAVIDFINES 479

Query: 287 -------NGVVYSFGSGSNFCLGHGEQHDELQPRAI 315
                  +G ++++G+G    LGHG++   L P  +
Sbjct: 480 DRLDTSLSGKLFTWGAGERGQLGHGDEEPRLVPSCV 515



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 71/147 (48%), Gaps = 9/147 (6%)

Query: 203 PIFR-----PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP 257
           PI R     P+ ++ +  +  + +  G      +T +G + + G ++ G+LGHG   D  
Sbjct: 280 PIMRMDALLPKALDRIAALDAQIIACGSKHAVIVTKQGQIFSWGESSGGKLGHGADADVS 339

Query: 258 TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAI 315
            PK I  L E  +VV +A G  +  AVT +G +Y++G  ++    LGHG       PR +
Sbjct: 340 QPKVIDALSE-SNVVLVACGEFHTCAVTVSGNLYTWGDDTHNTGYLGHGSAVSHWIPREV 398

Query: 316 QTFRRKGIHVVRVSAGDEHVVALDSSG 342
              + + + +  VS G  H  A+ S G
Sbjct: 399 -IGQIESVRISFVSCGPWHTAAVSSQG 424


>gi|307178981|gb|EFN67497.1| Probable E3 ubiquitin-protein ligase HERC4 [Camponotus floridanus]
          Length = 1048

 Score = 85.1 bits (209), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 105/218 (48%), Gaps = 11/218 (5%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 189
           +F  GS++ G LG G    + +   R ++F  A  V Q++  EN+   +   GQV++CG+
Sbjct: 1   MFCWGSTIHGELGLGGIEDENIFMPRQVDFAKANEVEQIACGENYTVTITNDGQVYSCGN 60

Query: 190 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
           N     GH    +   R +L+  L     K++  G   T  +   G + + G N  GQLG
Sbjct: 61  NDYGQLGHEKARK---RLQLIPGLDAFVFKKIACGSCHTLAVNEWGQLFSWGCNMKGQLG 117

Query: 250 HG--DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 307
               D  +R TP+ +  L     +VQIA G  + +A+T +G +YS+GS     LG G   
Sbjct: 118 LNSVDCTER-TPRMVKAL-GTSVIVQIACGIEHSIALTNDGELYSWGSNREGQLGIGSHT 175

Query: 308 -DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             E++P+ I T     + +  ++ G  H V +  SG V
Sbjct: 176 VTEIKPKRIITL--AAVPIAFIACGGYHTVVISKSGVV 211



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 63/193 (32%), Positives = 98/193 (50%), Gaps = 6/193 (3%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QI  G  H++ ++N   ++S GS+  G LG G  T   +   RI   +A  +  ++   
Sbjct: 140 VQIACGIEHSIALTNDGELYSWGSNREGQLGIGSHTVTEIKPKRIITLAAVPIAFIACGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H   + +SG VF  G N+    G  DT + I  P  +  L+         G  F+ FLT
Sbjct: 200 YHTVVISKSGVVFAWGRNTFGQLGLNDTQQRIV-PCQLRTLRNAKVCYAACGEEFSVFLT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGNGVV 290
           + G V TCG+  +GQLGHG+ ++   P+ +  +E +GS V QI+ G  + LA V   G V
Sbjct: 259 LDGGVFTCGAGMYGQLGHGNGMNEILPRQV--MELMGSTVTQISCGKRHTLALVPSRGRV 316

Query: 291 YSFGSGSNFCLGH 303
           Y++G G    LG+
Sbjct: 317 YAWGLGGAGQLGN 329



 Score = 74.3 bits (181), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 108/235 (45%), Gaps = 8/235 (3%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI  G  +T+ I+N   V+SCG++  G LGH     +      ++   A    +++    
Sbjct: 38  QIACGENYTVTITNDGQVYSCGNNDYGQLGHEKARKRLQLIPGLD---AFVFKKIACGSC 94

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H   V + GQ+F+ G N     G    +     PR+V+AL      Q+  G+  +  LT 
Sbjct: 95  HTLAVNEWGQLFSWGCNMKGQLGLNSVDCTERTPRMVKALGTSVIVQIACGIEHSIALTN 154

Query: 234 RGHVHTCGSNTHGQLGHGD-TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
            G +++ GSN  GQLG G  T+    PK I  L  V  +  IA G  + + ++ +GVV++
Sbjct: 155 DGELYSWGSNREGQLGIGSHTVTEIKPKRIITLAAV-PIAFIACGGYHTVVISKSGVVFA 213

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSLC 347
           +G  +   LG  +    + P  ++T R     V   + G+E  V L   G V  C
Sbjct: 214 WGRNTFGQLGLNDTQQRIVPCQLRTLRNA--KVCYAACGEEFSVFLTLDGGVFTC 266


>gi|12325184|gb|AAG52535.1|AC013289_2 putative regulator of chromosome condensation; 48393-44372
           [Arabidopsis thaliana]
          Length = 1028

 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 73/250 (29%), Positives = 111/250 (44%), Gaps = 31/250 (12%)

Query: 101 EHSSDIVETSAGNMQ------ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVS 153
           E S  I +   G++Q      +  G +HT ++++S  +F+ G    G LGHG   +  V 
Sbjct: 378 ESSCWIPKRVTGDLQGLYVSDVACGPWHTAVVASSGQLFTFGDGTFGALGHGDRRSTSVP 437

Query: 154 ----------FTRI--NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN 201
                      T++       A VV+V+   + A      GQVFT GD      GH D +
Sbjct: 438 REVESLIGLIVTKVACGVWHTAAVVEVTNEASEAEVDSSRGQVFTWGDGEKGQLGHGDND 497

Query: 202 RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 261
             +  P  V +L      QV  G + T   T RGHV+T GS  +GQLG+      PT K 
Sbjct: 498 TKLL-PECVISLTNENICQVACGHSLTVSRTSRGHVYTMGSTAYGQLGN------PTAKG 550

Query: 262 IAPLEEVGSVVQ-----IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
             P    G +V+     IA G  ++  +T    +Y++G G N  LGHG   ++ +P  + 
Sbjct: 551 NFPERVEGDIVEASVEEIACGSYHVAVLTSKSEIYTWGKGLNGQLGHGNVENKREPAVVG 610

Query: 317 TFRRKGIHVV 326
             R K +  +
Sbjct: 611 FLREKQVKAI 620



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 55/228 (24%), Positives = 98/228 (42%), Gaps = 11/228 (4%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN----- 173
           G YH    +   VF  G S+   +  G   +   +      P A     V  ++N     
Sbjct: 237 GSYHEDFDALGDVFVWGESISDGVLSGTGNSLNSTTEDALLPKALESTIVLDAQNIACGK 296

Query: 174 -HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            HA  V + G++F+ G+                +P+ + +++G+  K +  G   T  +T
Sbjct: 297 CHAVLVTKQGEIFSWGEGKGGK-LGHGLETDAQKPKFISSVRGLGFKSLACGDFHTCAIT 355

Query: 233 IRGHVHTCGSNTHG--QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
             G +++ G  TH    LGHG+      PK +    +   V  +A GP +   V  +G +
Sbjct: 356 QSGDLYSWGDGTHNVDLLGHGNESSCWIPKRVTGDLQGLYVSDVACGPWHTAVVASSGQL 415

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           ++FG G+   LGHG++     PR +++    G+ V +V+ G  H  A+
Sbjct: 416 FTFGDGTFGALGHGDRRSTSVPREVESL--IGLIVTKVACGVWHTAAV 461



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 87/341 (25%), Positives = 139/341 (40%), Gaps = 46/341 (13%)

Query: 26  RLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNR 85
           R S  D   L L+S     SHG Y + F +L D+          + +G          N 
Sbjct: 216 RFSTNDPFRLSLSSAVSTSSHGSYHEDFDALGDVFVWGESISDGVLSGTG--------NS 267

Query: 86  CNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGH 144
            N   +  L  L     S+ +++       I  G+ H +L++    +FS G    G LGH
Sbjct: 268 LNSTTEDAL--LPKALESTIVLDA----QNIACGKCHAVLVTKQGEIFSWGEGKGGKLGH 321

Query: 145 GPETT----QCVSFTR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFC--CGH 197
           G ET     + +S  R + F S A        + H   + QSG +++ GD +      GH
Sbjct: 322 GLETDAQKPKFISSVRGLGFKSLA------CGDFHTCAITQSGDLYSWGDGTHNVDLLGH 375

Query: 198 RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP 257
            + +      R+   L+G+    V  G   T  +   G + T G  T G LGHGD     
Sbjct: 376 GNESSCWIPKRVTGDLQGLYVSDVACGPWHTAVVASSGQLFTFGDGTFGALGHGDRRSTS 435

Query: 258 TPKSIAPLEEVGSVV-QIAAGPSYMLAV-------------TGNGVVYSFGSGSNFCLGH 303
            P+ +  L  +G +V ++A G  +  AV             +  G V+++G G    LGH
Sbjct: 436 VPREVESL--IGLIVTKVACGVWHTAAVVEVTNEASEAEVDSSRGQVFTWGDGEKGQLGH 493

Query: 304 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G+   +L P  + +   + I   +V+ G    V+  S G+V
Sbjct: 494 GDNDTKLLPECVISLTNENI--CQVACGHSLTVSRTSRGHV 532


>gi|449462158|ref|XP_004148808.1| PREDICTED: uncharacterized protein LOC101222741 [Cucumis sativus]
 gi|449506967|ref|XP_004162897.1| PREDICTED: uncharacterized LOC101222741 [Cucumis sativus]
          Length = 1120

 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 56/168 (33%), Positives = 88/168 (52%), Gaps = 7/168 (4%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           HAA V + G+VFT G+ S    GH    + + +PR+VE+L       V  G   T  +TI
Sbjct: 292 HAALVTRQGEVFTWGEESGGRLGH-GVVKDVIQPRMVESLAASSIGFVACGEFHTCAVTI 350

Query: 234 RGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            G ++T G  TH  G LGHG  +    PK ++ PLE +  V  +  GP +   VT  G +
Sbjct: 351 TGELYTWGDGTHNAGLLGHGSDVSHWIPKRVSGPLEGL-QVTSVTCGPWHTALVTSMGQL 409

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           ++FG G+   LGHG++ +   P+ +++    G+  + V+ G  H  A+
Sbjct: 410 FTFGDGTFGALGHGDRENISYPKEVESL--SGLRTIAVACGVWHTAAV 455



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 68/243 (27%), Positives = 114/243 (46%), Gaps = 19/243 (7%)

Query: 116 ITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           +T G +HT L+++   +F+ G    G LGHG    + +S+ + +   S    + V+    
Sbjct: 393 VTCGPWHTALVTSMGQLFTFGDGTFGALGHGDR--ENISYPKEVESLSGLRTIAVACGVW 450

Query: 174 HAAFVLQ-----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           H A V++           SG++FT GD      GH D   P  +P  V AL      +V 
Sbjct: 451 HTAAVVEVIVTQSSSSISSGKLFTWGDGDKNRLGHGD-KEPRLKPTCVPALIDYDFHKVA 509

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
            G + T  LT  G V + GS  +GQLG+  + D   P  +       SV +++ G  +++
Sbjct: 510 CGHSITVGLTTSGQVFSMGSTVYGQLGN-PSADGKIPCLVEDKLFGESVEEVSCGAYHVV 568

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            +T    VY++G G+N  LGHG+  D   P  ++  + +  HV  ++ G  +  A+    
Sbjct: 569 VLTSKNEVYTWGKGANGRLGHGDVEDRKTPTLVEALKDR--HVKYIACGSNYTAAICLHK 626

Query: 343 YVS 345
           +VS
Sbjct: 627 WVS 629



 Score = 71.2 bits (173), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 104/245 (42%), Gaps = 31/245 (12%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSASE 172
           R+  L+     VF+ G    G LGHG       P   + ++ + I F        V+  E
Sbjct: 291 RHAALVTRQGEVFTWGEESGGRLGHGVVKDVIQPRMVESLAASSIGF--------VACGE 342

Query: 173 NHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            H   V  +G+++T GD  +++   GH          R+   L+G+    VT G   T  
Sbjct: 343 FHTCAVTITGELYTWGDGTHNAGLLGHGSDVSHWIPKRVSGPLEGLQVTSVTCGPWHTAL 402

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT----- 285
           +T  G + T G  T G LGHGD  +   PK +  L  + ++  +A G  +  AV      
Sbjct: 403 VTSMGQLFTFGDGTFGALGHGDRENISYPKEVESLSGLRTIA-VACGVWHTAAVVEVIVT 461

Query: 286 ------GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
                  +G ++++G G    LGHG++   L+P  +        H  +V+ G    V L 
Sbjct: 462 QSSSSISSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYDFH--KVACGHSITVGLT 519

Query: 340 SSGYV 344
           +SG V
Sbjct: 520 TSGQV 524



 Score = 51.2 bits (121), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 71/155 (45%), Gaps = 8/155 (5%)

Query: 190 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
           NSS+     D    +  PR +E+   +    +  G+     +T +G V T G  + G+LG
Sbjct: 259 NSSYVTLRTD----VLLPRPLESNIVLDIHHIACGVRHAALVTRQGEVFTWGEESGGRLG 314

Query: 250 HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQH 307
           HG   D   P+ +  L    S+  +A G  +  AVT  G +Y++G G++    LGHG   
Sbjct: 315 HGVVKDVIQPRMVESL-AASSIGFVACGEFHTCAVTITGELYTWGDGTHNAGLLGHGSDV 373

Query: 308 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
               P+ + +   +G+ V  V+ G  H   + S G
Sbjct: 374 SHWIPKRV-SGPLEGLQVTSVTCGPWHTALVTSMG 407


>gi|297838521|ref|XP_002887142.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332983|gb|EFH63401.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 542

 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 97/359 (27%), Positives = 145/359 (40%), Gaps = 34/359 (9%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLEL---------TSKTFGGSHGLYPQKFRSLVD 58
           F +   PS ++  +LT+  L   DLA LE          T   F       P    S+ +
Sbjct: 51  FFLASCPS-IVLHVLTTCDLGPRDLAKLEASDAQLSFMATCSFFRKPANFSPDFDLSISE 109

Query: 59  LAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITT 118
           +AA  +C   +I+  M    + E+  RC G+WK VL+FL + E      ++     Q   
Sbjct: 110 VAALDICQKRAIFKCMGEEERQEIKRRCGGSWKLVLKFLLAGEFGCRREKS-----QALA 164

Query: 119 GRYHTLLI-SNSSVFSCGSSLCGVLGHGP--ETTQCVSFTRINFPSAAHVVQVSASENHA 175
           G  H++ + S   V+S G +  G LG G   ++ Q +    +N      ++Q + S +  
Sbjct: 165 GPGHSIAVTSKGVVYSFGFNGSGQLGQGTTQDSWQPLPVRSLN---GIRIIQAAISTDRT 221

Query: 176 AFVLQSGQVFTCGDNSSFCCGHRDTNRP----IFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             +  +G+V+  G     C        P    I  P+ V++L  +   Q   G  FT  L
Sbjct: 222 FVISDAGEVYAFG---KVCFSEAKLEVPETKLITTPQRVKSLAEIFVVQAAIGNYFTAIL 278

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV----TGN 287
           +  G V+T       +LGH        P+ +    E   VVQIAAG  Y+LA+    TG 
Sbjct: 279 SREGRVYTLSWGNDERLGHQTDHSCSLPQPLLGALENIPVVQIAAGFCYLLALAFQPTGM 338

Query: 288 GV--VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            V  V     G            E  PR I+ F    I  V VSAG  H   +   G V
Sbjct: 339 SVYSVGCGLGGKLGHGLSDSDASEKYPRLIKKFGLLNIEPVMVSAGPWHAAVVGKDGRV 397



 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/144 (31%), Positives = 69/144 (47%), Gaps = 9/144 (6%)

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
           V VSA   HAA V + G+V T G     C GH  T      P++V+ LK V    V  G+
Sbjct: 379 VMVSAGPWHAAVVGKDGRVCTWGWGRFGCLGH-GTEEAENAPKVVDGLKDVKAVHVATGV 437

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVG------SVVQIAAGP 278
             T  ++  G V++ GS     LG  D  +   TPK ++ L++        S+     G 
Sbjct: 438 YTTFVVSDDGQVYSFGSG-GANLGQDDVDENTLTPKLVSSLKDTKERMVHVSLTNSGNGT 496

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLG 302
            +  A+T +G +Y+FG+G+   LG
Sbjct: 497 GHTFAMTESGTLYAFGAGNRGQLG 520



 Score = 47.4 bits (111), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 60/143 (41%), Gaps = 8/143 (5%)

Query: 207 PRLVE--ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
           PRL++   L  +    V+AG      +   G V T G    G LGHG       PK +  
Sbjct: 365 PRLIKKFGLLNIEPVMVSAGPWHAAVVGKDGRVCTWGWGRFGCLGHGTEEAENAPKVVDG 424

Query: 265 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
           L++V   V +A G      V+ +G VYSFGSG           + L P+ + + +     
Sbjct: 425 LKDV-KAVHVATGVYTTFVVSDDGQVYSFGSGGANLGQDDVDENTLTPKLVSSLKDTKER 483

Query: 325 VVRVSA-----GDEHVVALDSSG 342
           +V VS      G  H  A+  SG
Sbjct: 484 MVHVSLTNSGNGTGHTFAMTESG 506


>gi|222631437|gb|EEE63569.1| hypothetical protein OsJ_18386 [Oryza sativa Japonica Group]
          Length = 1132

 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 60/193 (31%), Positives = 98/193 (50%), Gaps = 9/193 (4%)

Query: 150 QCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHR-DTNRPIFRPR 208
            C+    + F     V  +S    HA  V + G++++ G+ S    GH  D + P  +P+
Sbjct: 343 DCLIPKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVP--QPK 400

Query: 209 LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APL 265
           L++AL  +  + V  G   T  +T+ G ++T G+ T   G LGHG+ +    PK +  PL
Sbjct: 401 LIDALANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPL 460

Query: 266 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
           E +  V  I+ GP +   VT  G +++FG GS   LGHG++     PR +++   KG+  
Sbjct: 461 EGI-HVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESL--KGLRT 517

Query: 326 VRVSAGDEHVVAL 338
           VR + G  H  A+
Sbjct: 518 VRAACGVWHTAAV 530



 Score = 78.2 bits (191), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 105/230 (45%), Gaps = 28/230 (12%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           I+ G +HT +++++  +F+ G    GVLGHG    Q +S  R +        V+ +    
Sbjct: 468 ISCGPWHTAIVTSAGQLFTFGDGSFGVLGHG--DRQSLSVPREVESLKGLRTVRAACGVW 525

Query: 174 HAAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
           H A V++            SG++FT GD      GH D +  +  P  V AL      Q+
Sbjct: 526 HTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLV-PTCVAALVEPNFCQI 584

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAA 276
             G   T  LT  GHV+T GS  +GQLG+      P    + P+   G      V +I+ 
Sbjct: 585 ACGHCMTVALTTSGHVYTMGSPVYGQLGN------PQADGMLPVRVEGKLHKNFVEEISC 638

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
           G  ++  +T    VY++G G+N  LGHG+  D   P  ++  + K +  V
Sbjct: 639 GAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRSSPTLVEALKDKQVRTV 688



 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 62/245 (25%), Positives = 104/245 (42%), Gaps = 28/245 (11%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHG-----PETTQCVSFTRINFPSAAHVVQVSASEN 173
           GR+ TL+     ++S G    G LGHG     P+     +   +N      +  V+  E 
Sbjct: 365 GRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALANMN------IELVACGEY 418

Query: 174 HAAFVLQSGQVFTCGDNSSFC--CGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           H   V  SG ++T G+ +S     GH +        R+   L+G+    ++ G   T  +
Sbjct: 419 HTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLEGIHVSAISCGPWHTAIV 478

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT------ 285
           T  G + T G  + G LGHGD      P+ +  L+ +   V+ A G  +  AV       
Sbjct: 479 TSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLKGL-RTVRAACGVWHTAAVVEVMVGN 537

Query: 286 ------GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
                  +G ++++G G    LGHG++   L P  +        +  +++ G    VAL 
Sbjct: 538 SSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALVEP--NFCQIACGHCMTVALT 595

Query: 340 SSGYV 344
           +SG+V
Sbjct: 596 TSGHV 600



 Score = 48.1 bits (113), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 45/176 (25%), Positives = 77/176 (43%), Gaps = 9/176 (5%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQC 151
           R +R    V H++ +VE       +  G   +   S+  +F+ G    G LGHG + T+ 
Sbjct: 516 RTVRAACGVWHTAAVVE-------VMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRL 568

Query: 152 VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE 211
           V  T +      +  Q++        +  SG V+T G       G+   +  +   R+  
Sbjct: 569 VP-TCVAALVEPNFCQIACGHCMTVALTTSGHVYTMGSPVYGQLGNPQADG-MLPVRVEG 626

Query: 212 ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE 267
            L     ++++ G      LT R  V+T G   +G+LGHGDT DR +P  +  L++
Sbjct: 627 KLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRSSPTLVEALKD 682



 Score = 42.7 bits (99), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 57/127 (44%), Gaps = 9/127 (7%)

Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH---VVQVSA 170
           QI  G   T+ ++ S  V++ GS + G LG+     Q      +      H   V ++S 
Sbjct: 583 QIACGHCMTVALTTSGHVYTMGSPVYGQLGN----PQADGMLPVRVEGKLHKNFVEEISC 638

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
              H A +    +V+T G  ++   GH DT+     P LVEALK    + V  G+NFT  
Sbjct: 639 GAYHVAVLTSRTEVYTWGKGANGRLGHGDTDD-RSSPTLVEALKDKQVRTVVCGINFTAA 697

Query: 231 LTIRGHV 237
           + I   V
Sbjct: 698 ICIHKWV 704


>gi|194860035|ref|XP_001969502.1| GG23921 [Drosophila erecta]
 gi|190661369|gb|EDV58561.1| GG23921 [Drosophila erecta]
          Length = 487

 Score = 84.7 bits (208), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 27/226 (11%)

Query: 122 HTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           HT+LI+ +      G +  G LG   +       T I      ++VQ +   +H  F+  
Sbjct: 127 HTILINMDRKALGFGRNPSGQLGLSQDIKLAEKPTIIPALEQLNIVQAAVGRHHTLFLTD 186

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           +G V+ CG+N S  CG  +T+  I+ P  +   +G P  ++  G  F+  L I+G +HT 
Sbjct: 187 TGTVYACGENKSGQCGVGNTHANIYSPTPIN-YRGPPIIRIGCGAEFSVILDIKGSLHTF 245

Query: 241 GSNTHGQLGHGDTLD------------RPTPKS------------IAPLEEVGSVVQIAA 276
           G   +GQLGH                   +PK             + P++ V  +V  A 
Sbjct: 246 GLPEYGQLGHNTDAKYFVNANKLSFHFETSPKKVVLYIEKSKEGHVTPVDGV-QIVDFAC 304

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           G ++ +A+     VYS+G G    LGH E  DE+ PR ++ F  +G
Sbjct: 305 GNNHTVAIDSKKRVYSWGFGGFGRLGHAEPKDEMVPRLMKFFDTQG 350



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/211 (25%), Positives = 85/211 (40%), Gaps = 41/211 (19%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 219
           PSAAH + ++       F          G N S   G     +   +P ++ AL+ +   
Sbjct: 123 PSAAHTILINMDRKALGF----------GRNPSGQLGLSQDIKLAEKPTIIPALEQLNIV 172

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT---LDRPTPKSI-APLEEVGSVVQIA 275
           Q   G + T FLT  G V+ CG N  GQ G G+T   +  PTP +   P      +++I 
Sbjct: 173 QAAVGRHHTLFLTDTGTVYACGENKSGQCGVGNTHANIYSPTPINYRGP-----PIIRIG 227

Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ------------HDELQPRAIQTFRRK-- 321
            G  + + +   G +++FG      LGH               H E  P+ +  +  K  
Sbjct: 228 CGAEFSVILDIKGSLHTFGLPEYGQLGHNTDAKYFVNANKLSFHFETSPKKVVLYIEKSK 287

Query: 322 --------GIHVVRVSAGDEHVVALDSSGYV 344
                   G+ +V  + G+ H VA+DS   V
Sbjct: 288 EGHVTPVDGVQIVDFACGNNHTVAIDSKKRV 318


>gi|302824131|ref|XP_002993711.1| hypothetical protein SELMODRAFT_431761 [Selaginella moellendorffii]
 gi|300138435|gb|EFJ05203.1| hypothetical protein SELMODRAFT_431761 [Selaginella moellendorffii]
          Length = 991

 Score = 84.7 bits (208), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 65/224 (29%), Positives = 101/224 (45%), Gaps = 16/224 (7%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G +HT L+S++  +F+ G    GVLGHG +    +    +        V+ +    H
Sbjct: 401 IACGAWHTALVSSAGQLFTFGDGTFGVLGHGDKRNLAIP-KEVESLKGLKTVRAACGIWH 459

Query: 175 AAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            A V++            SG++FT GD   +  GH D  + +  P  V AL     +QV 
Sbjct: 460 TAAVVEVIVGYSSATSCSSGKLFTWGDGDKYRLGHGDKEQKLV-PTCVAALVDYNFRQVA 518

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
            G + T  LT  G V T GS  +GQLG+    D   P  +        V +I  G  ++ 
Sbjct: 519 CGHSLTVALTTSGRVFTMGSTIYGQLGNPKA-DGKVPGMVDGELARTFVEEIGCGAHHVA 577

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
           A++    +Y++G G+N  LGHG+  D   P  ++  R K +  V
Sbjct: 578 ALSSKTEIYTWGKGANGRLGHGDVEDRTAPTLVEALRDKQVKTV 621



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/183 (31%), Positives = 95/183 (51%), Gaps = 10/183 (5%)

Query: 162 AAHVVQVSA---SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
           AA V+ VS+      HAA V + G VF  G+      GH   +  +  P+LV+AL GV  
Sbjct: 285 AAVVLDVSSIACGSRHAALVTKQGDVFCWGEEYGGRLGH-GIDVDVSEPQLVQALAGVNA 343

Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQIA 275
           + V  G   T  +T+ G ++T G++    G +GH + +    PK + +PLE V  +  IA
Sbjct: 344 ELVACGDFHTCAVTLSGELYTWGADAQSGGLVGHSNPVSHWMPKRMSSPLEGV-RISSIA 402

Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
            G  +   V+  G +++FG G+   LGHG++ +   P+ +++   KG+  VR + G  H 
Sbjct: 403 CGAWHTALVSSAGQLFTFGDGTFGVLGHGDKRNLAIPKEVESL--KGLKTVRAACGIWHT 460

Query: 336 VAL 338
            A+
Sbjct: 461 AAV 463



 Score = 68.9 bits (167), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 62/246 (25%), Positives = 102/246 (41%), Gaps = 32/246 (13%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSASE 172
           R+  L+     VF  G    G LGHG       P+  Q ++              V+  +
Sbjct: 299 RHAALVTKQGDVFCWGEEYGGRLGHGIDVDVSEPQLVQALAGVNAEL--------VACGD 350

Query: 173 NHAAFVLQSGQVFTCGDN--SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            H   V  SG+++T G +  S    GH +        R+   L+GV    +  G   T  
Sbjct: 351 FHTCAVTLSGELYTWGADAQSGGLVGHSNPVSHWMPKRMSSPLEGVRISSIACGAWHTAL 410

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE------------EVGSVVQIAAGP 278
           ++  G + T G  T G LGHGD  +   PK +  L+               +VV++  G 
Sbjct: 411 VSSAGQLFTFGDGTFGVLGHGDKRNLAIPKEVESLKGLKTVRAACGIWHTAAVVEVIVGY 470

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           S   + + +G ++++G G  + LGHG++  +L P  +        +  +V+ G    VAL
Sbjct: 471 SSATSCS-SGKLFTWGDGDKYRLGHGDKEQKLVPTCVAAL--VDYNFRQVACGHSLTVAL 527

Query: 339 DSSGYV 344
            +SG V
Sbjct: 528 TTSGRV 533



 Score = 42.0 bits (97), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 33/140 (23%), Positives = 65/140 (46%), Gaps = 4/140 (2%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ ++A   +    +  G      +T +G V   G    G+LGHG  +D   P+ +  L 
Sbjct: 280 PKALQAAVVLDVSSIACGSRHAALVTKQGDVFCWGEEYGGRLGHGIDVDVSEPQLVQALA 339

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSG--SNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            V + + +A G  +  AVT +G +Y++G+   S   +GH        P+ + +   +G+ 
Sbjct: 340 GVNAEL-VACGDFHTCAVTLSGELYTWGADAQSGGLVGHSNPVSHWMPKRMSS-PLEGVR 397

Query: 325 VVRVSAGDEHVVALDSSGYV 344
           +  ++ G  H   + S+G +
Sbjct: 398 ISSIACGAWHTALVSSAGQL 417


>gi|115463633|ref|NP_001055416.1| Os05g0384800 [Oryza sativa Japonica Group]
 gi|113578967|dbj|BAF17330.1| Os05g0384800 [Oryza sativa Japonica Group]
          Length = 1086

 Score = 84.7 bits (208), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 60/193 (31%), Positives = 98/193 (50%), Gaps = 9/193 (4%)

Query: 150 QCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHR-DTNRPIFRPR 208
            C+    + F     V  +S    HA  V + G++++ G+ S    GH  D + P  +P+
Sbjct: 297 DCLIPKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVP--QPK 354

Query: 209 LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APL 265
           L++AL  +  + V  G   T  +T+ G ++T G+ T   G LGHG+ +    PK +  PL
Sbjct: 355 LIDALANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPL 414

Query: 266 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
           E +  V  I+ GP +   VT  G +++FG GS   LGHG++     PR +++   KG+  
Sbjct: 415 EGI-HVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESL--KGLRT 471

Query: 326 VRVSAGDEHVVAL 338
           VR + G  H  A+
Sbjct: 472 VRAACGVWHTAAV 484



 Score = 78.2 bits (191), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 105/230 (45%), Gaps = 28/230 (12%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           I+ G +HT +++++  +F+ G    GVLGHG    Q +S  R +        V+ +    
Sbjct: 422 ISCGPWHTAIVTSAGQLFTFGDGSFGVLGHG--DRQSLSVPREVESLKGLRTVRAACGVW 479

Query: 174 HAAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
           H A V++            SG++FT GD      GH D +  +  P  V AL      Q+
Sbjct: 480 HTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLV-PTCVAALVEPNFCQI 538

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAA 276
             G   T  LT  GHV+T GS  +GQLG+      P    + P+   G      V +I+ 
Sbjct: 539 ACGHCMTVALTTSGHVYTMGSPVYGQLGN------PQADGMLPVRVEGKLHKNFVEEISC 592

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
           G  ++  +T    VY++G G+N  LGHG+  D   P  ++  + K +  V
Sbjct: 593 GAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRSSPTLVEALKDKQVRTV 642



 Score = 64.7 bits (156), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 62/245 (25%), Positives = 104/245 (42%), Gaps = 28/245 (11%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHG-----PETTQCVSFTRINFPSAAHVVQVSASEN 173
           GR+ TL+     ++S G    G LGHG     P+     +   +N      +  V+  E 
Sbjct: 319 GRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALANMN------IELVACGEY 372

Query: 174 HAAFVLQSGQVFTCGDNSSFC--CGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           H   V  SG ++T G+ +S     GH +        R+   L+G+    ++ G   T  +
Sbjct: 373 HTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLEGIHVSAISCGPWHTAIV 432

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT------ 285
           T  G + T G  + G LGHGD      P+ +  L+ +   V+ A G  +  AV       
Sbjct: 433 TSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLKGL-RTVRAACGVWHTAAVVEVMVGN 491

Query: 286 ------GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
                  +G ++++G G    LGHG++   L P  +        +  +++ G    VAL 
Sbjct: 492 SSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALVEP--NFCQIACGHCMTVALT 549

Query: 340 SSGYV 344
           +SG+V
Sbjct: 550 TSGHV 554



 Score = 47.8 bits (112), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 48/193 (24%), Positives = 84/193 (43%), Gaps = 10/193 (5%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQC 151
           R +R    V H++ +VE       +  G   +   S+  +F+ G    G LGHG + T+ 
Sbjct: 470 RTVRAACGVWHTAAVVE-------VMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRL 522

Query: 152 VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE 211
           V  T +      +  Q++        +  SG V+T G       G+   +  +   R+  
Sbjct: 523 VP-TCVAALVEPNFCQIACGHCMTVALTTSGHVYTMGSPVYGQLGNPQADG-MLPVRVEG 580

Query: 212 ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV 271
            L     ++++ G      LT R  V+T G   +G+LGHGDT DR +P  +  L++   V
Sbjct: 581 KLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRSSPTLVEALKD-KQV 639

Query: 272 VQIAAGPSYMLAV 284
             +  G ++  A+
Sbjct: 640 RTVVCGINFTAAI 652



 Score = 42.7 bits (99), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 57/127 (44%), Gaps = 9/127 (7%)

Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH---VVQVSA 170
           QI  G   T+ ++ S  V++ GS + G LG+     Q      +      H   V ++S 
Sbjct: 537 QIACGHCMTVALTTSGHVYTMGSPVYGQLGN----PQADGMLPVRVEGKLHKNFVEEISC 592

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
              H A +    +V+T G  ++   GH DT+     P LVEALK    + V  G+NFT  
Sbjct: 593 GAYHVAVLTSRTEVYTWGKGANGRLGHGDTDD-RSSPTLVEALKDKQVRTVVCGINFTAA 651

Query: 231 LTIRGHV 237
           + I   V
Sbjct: 652 ICIHKWV 658


>gi|195473703|ref|XP_002089132.1| GE25855 [Drosophila yakuba]
 gi|194175233|gb|EDW88844.1| GE25855 [Drosophila yakuba]
          Length = 487

 Score = 84.7 bits (208), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 27/226 (11%)

Query: 122 HTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           HT+LI+ +      G +  G LG   +       T I      ++VQ +   +H  F+  
Sbjct: 127 HTILINMDRKALGFGRNPSGQLGLSQDIKLAEKPTIIPALEQLNIVQAAVGRHHTLFLTD 186

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           +G V+ CG+N S  CG  +T+  I+ P  +   +G P  ++  G  F+  L I+G +HT 
Sbjct: 187 TGTVYACGENKSGQCGVGNTHANIYSPTPIN-YRGPPIIRIGCGAEFSVILDIKGSLHTF 245

Query: 241 GSNTHGQLGHGDTLD------------RPTPKS------------IAPLEEVGSVVQIAA 276
           G   +GQLGH                   +PK             + P++ V  +V  A 
Sbjct: 246 GLPEYGQLGHNTDAKYFVNANKLSFHFETSPKKVVLYIEKSKEGHVTPVDGV-QIVDFAC 304

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           G ++ +A+     VYS+G G    LGH E  DE+ PR ++ F  +G
Sbjct: 305 GNNHTVAIDSKKRVYSWGFGGFGRLGHAEPKDEMVPRLMKFFDTQG 350



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 54/211 (25%), Positives = 85/211 (40%), Gaps = 41/211 (19%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 219
           PSAAH + ++       F          G N S   G     +   +P ++ AL+ +   
Sbjct: 123 PSAAHTILINMDRKALGF----------GRNPSGQLGLSQDIKLAEKPTIIPALEQLNIV 172

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT---LDRPTPKSI-APLEEVGSVVQIA 275
           Q   G + T FLT  G V+ CG N  GQ G G+T   +  PTP +   P      +++I 
Sbjct: 173 QAAVGRHHTLFLTDTGTVYACGENKSGQCGVGNTHANIYSPTPINYRGP-----PIIRIG 227

Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ------------HDELQPRAIQTFRRK-- 321
            G  + + +   G +++FG      LGH               H E  P+ +  +  K  
Sbjct: 228 CGAEFSVILDIKGSLHTFGLPEYGQLGHNTDAKYFVNANKLSFHFETSPKKVVLYIEKSK 287

Query: 322 --------GIHVVRVSAGDEHVVALDSSGYV 344
                   G+ +V  + G+ H VA+DS   V
Sbjct: 288 EGHVTPVDGVQIVDFACGNNHTVAIDSKKRV 318


>gi|357520085|ref|XP_003630331.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355524353|gb|AET04807.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
          Length = 371

 Score = 84.7 bits (208), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 109/218 (50%), Gaps = 7/218 (3%)

Query: 126 ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ-V 184
           +S + V S G    G LGHG +T   +  T+++      +V V+   ++     +SG+ V
Sbjct: 120 VSGNVVCSWGRGEDGQLGHG-DTDDRLLPTKLSAFDGQDIVSVTCGADYTVARSKSGKDV 178

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
           ++ G       GH D +  +F P  + AL+G+  KQ++ G      +T+   V + G N 
Sbjct: 179 YSWGWGDFGRLGHGDPS-DLFIPHPIRALQGLRIKQISCGDCHCLAVTMENKVLSWGRNQ 237

Query: 245 HGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG 304
           +G+LG G T D   P+ I   E +  +  +AAG  + +A+T +G +Y +G G    LG G
Sbjct: 238 NGELGLGTTKDSHVPQKILAFEGI-RIKMVAAGAEHSVAITEDGDLYGWGWGRYGNLGLG 296

Query: 305 EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           + +D L P  +      G  +V VS G  H +++ SSG
Sbjct: 297 DTNDRLIPEKVNI---DGDKIVMVSCGWRHTISISSSG 331



 Score = 71.2 bits (173), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 59/215 (27%), Positives = 98/215 (45%), Gaps = 6/215 (2%)

Query: 114 MQITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS 171
           + +T G  +T+  S S   V+S G    G LGHG  +   +    I       + Q+S  
Sbjct: 159 VSVTCGADYTVARSKSGKDVYSWGWGDFGRLGHGDPSDLFIPHP-IRALQGLRIKQISCG 217

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           + H   V    +V + G N +   G   T +    P+ + A +G+  K V AG   +  +
Sbjct: 218 DCHCLAVTMENKVLSWGRNQNGELG-LGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAI 276

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           T  G ++  G   +G LG GDT DR  P+ +    +   +V ++ G  + ++++ +G +Y
Sbjct: 277 TEDGDLYGWGWGRYGNLGLGDTNDRLIPEKVNI--DGDKIVMVSCGWRHTISISSSGGLY 334

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
           + G      LGHG+  D L PR +Q    K I  V
Sbjct: 335 THGWSKYGQLGHGDFEDCLVPRKVQALSDKLISQV 369


>gi|330822422|ref|XP_003291651.1| hypothetical protein DICPUDRAFT_156281 [Dictyostelium purpureum]
 gi|325078150|gb|EGC31817.1| hypothetical protein DICPUDRAFT_156281 [Dictyostelium purpureum]
          Length = 453

 Score = 84.7 bits (208), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 70/241 (29%), Positives = 106/241 (43%), Gaps = 16/241 (6%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+  GR HTL+++    VFS G      LG G    Q +     +     +++++     
Sbjct: 155 QVAGGRRHTLVLTEDFRVFSFGVGSEYQLGVGSTENQPLPVEIESLSKLGNIIKLECGWG 214

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  +   G +FT G       GH  +  PI  P++++       K +  G +F   +T 
Sbjct: 215 HSLVLTSDGDIFTWGFTQDSQTGHGFSEEPIHIPKMIKT--NYKFKNIFTGSDFNLAITN 272

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPK---SIAPL--------EEVGSVVQIAAGPSYML 282
            G V + GS   GQLGHGDT +   PK   SI PL          +     +A G S+ L
Sbjct: 273 DGRVCSWGSGEFGQLGHGDTKNVEAPKLIQSIQPLVHTNLINTNRIYEYKMVACGFSHAL 332

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDE-LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
            +  +G + + G   N  LG G + D  L P  ++ F   G  VV+VSAG  H   +  S
Sbjct: 333 IIDNDGKLLTLGWNGNGQLGSGVKGDNHLVPTKLE-FDFDGEKVVKVSAGRNHSACITES 391

Query: 342 G 342
           G
Sbjct: 392 G 392



 Score = 67.4 bits (163), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 60/237 (25%), Positives = 105/237 (44%), Gaps = 24/237 (10%)

Query: 127 SNSSVFSCGSSLCGVLGHGPETTQCVSF----TRIN----------FPSAAHVVQVSASE 172
           +N  ++SCG  + G LG   E  +  SF    T+ +          +        +    
Sbjct: 45  TNKYLYSCGCGIDGKLGIDNELVKFESFPTKLTKFDNGENNGASQRYQDNLECKDIVCGH 104

Query: 173 NHAAFV-LQSGQVFTCGDNSSFCCG--HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            H   V  +  Q+++CG  S       +++TN     P LV  LK    KQV  G   T 
Sbjct: 105 YHTMLVSKEKDQLYSCGWTSFVAMDRVNKETNFKSIIPSLVTPLKDFKIKQVAGGRRHTL 164

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
            LT    V + G  +  QLG G T ++P P  I  L ++G+++++  G  + L +T +G 
Sbjct: 165 VLTEDFRVFSFGVGSEYQLGVGSTENQPLPVEIESLSKLGNIIKLECGWGHSLVLTSDGD 224

Query: 290 VYSFGSGSNFCLGHGEQHDELQ-PRAIQT-FRRKGIHVVRVSAGDEHVVALDSSGYV 344
           ++++G   +   GHG   + +  P+ I+T ++ K I       G +  +A+ + G V
Sbjct: 225 IFTWGFTQDSQTGHGFSEEPIHIPKMIKTNYKFKNIF-----TGSDFNLAITNDGRV 276



 Score = 46.6 bits (109), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 54/245 (22%), Positives = 103/245 (42%), Gaps = 27/245 (11%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHG--PETTQCVSFTRINFPSAAHVVQVSA 170
           +++  G  H+L L S+  +F+ G +     GHG   E        + N+        +  
Sbjct: 207 IKLECGWGHSLVLTSDGDIFTWGFTQDSQTGHGFSEEPIHIPKMIKTNY----KFKNIFT 262

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV------------PC 218
             +    +   G+V + G       GH DT + +  P+L+++++ +              
Sbjct: 263 GSDFNLAITNDGRVCSWGSGEFGQLGHGDT-KNVEAPKLIQSIQPLVHTNLINTNRIYEY 321

Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAG 277
           K V  G +    +   G + T G N +GQLG G   D    P  +    +   VV+++AG
Sbjct: 322 KMVACGFSHALIIDNDGKLLTLGWNGNGQLGSGVKGDNHLVPTKLEFDFDGEKVVKVSAG 381

Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGI-----HVVRVSAG 331
            ++   +T +G +Y +G+G+   LG+G+   D+L P  +              V+ +S G
Sbjct: 382 RNHSACITESGKLYIWGNGNKGKLGNGKSVGDQLTPLELIDIDENNTDPSNQKVLNISCG 441

Query: 332 DEHVV 336
            +H +
Sbjct: 442 FDHTI 446


>gi|148223431|ref|NP_001085755.1| HECT and RLD domain containing E3 ubiquitin protein ligase family
           member 6 [Xenopus laevis]
 gi|49115314|gb|AAH73297.1| MGC80684 protein [Xenopus laevis]
          Length = 1028

 Score = 84.7 bits (208), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 114/229 (49%), Gaps = 13/229 (5%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + ++ G  H++ + +  +++S G    G LG G  +++  +  RI       ++Q+S   
Sbjct: 87  VDVSCGTNHSVAMCDEGNIYSWGDGSEGQLGTGKFSSKNFTPKRITGLLNRKIIQISCGN 146

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR---PRLVEALKGVPCKQVTAGLNFTG 229
            H+  + + G+VF+ G N    CG       I     P+LV++LKG+P  QVTAG + T 
Sbjct: 147 FHSVALAEDGRVFSWGQNK---CGQLGLGSQIINQATPQLVKSLKGIPLVQVTAGGSQTF 203

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPT--PKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
            L++ G V   G N  GQLG  +   + T  P ++  L ++G V  I+ G  +   +  +
Sbjct: 204 ALSMSGTVFAWGRNNAGQLGFKNDAKKGTFKPYAVDSLRDLG-VAYISCGEEHTAVLNKD 262

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
           G+VY+FG  +   LG    +    P+ I+ + R+   V +V+ G  H +
Sbjct: 263 GIVYTFGDDTYGQLGQQSGNQTSVPQKIEEYSRQ---VSQVACGRYHTL 308



 Score = 81.6 bits (200), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 63/247 (25%), Positives = 115/247 (46%), Gaps = 10/247 (4%)

Query: 102 HSSDIVETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP 160
             +D  +      +++ G  H+L L+ + ++ SCG +  G LG     ++    + +   
Sbjct: 25  KENDYFQKKESVQKVSIGEKHSLYLLKDGTLLSCGQNPYGQLGRKGNNSRIEQISSL--- 81

Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
            A  +V VS   NH+  +   G +++ GD S    G    +   F P+ +  L      Q
Sbjct: 82  EAQTIVDVSCGTNHSVAMCDEGNIYSWGDGSEGQLGTGKFSSKNFTPKRITGLLNRKIIQ 141

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
           ++ G   +  L   G V + G N  GQLG G   +++ TP+ +  L+ +  +VQ+ AG S
Sbjct: 142 ISCGNFHSVALAEDGRVFSWGQNKCGQLGLGSQIINQATPQLVKSLKGI-PLVQVTAGGS 200

Query: 280 YMLAVTGNGVVYSFGSGSNFCLG--HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
              A++ +G V+++G  +   LG  +  +    +P A+ + R  G  V  +S G+EH   
Sbjct: 201 QTFALSMSGTVFAWGRNNAGQLGFKNDAKKGTFKPYAVDSLRDLG--VAYISCGEEHTAV 258

Query: 338 LDSSGYV 344
           L+  G V
Sbjct: 259 LNKDGIV 265



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 95/200 (47%), Gaps = 7/200 (3%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QI+ G +H++ L  +  VFS G + CG LG G +     +   +       +VQV+A  
Sbjct: 140 IQISCGNFHSVALAEDGRVFSWGQNKCGQLGLGSQIINQATPQLVKSLKGIPLVQVTAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHR-DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           +    +  SG VF  G N++   G + D  +  F+P  V++L+ +    ++ G   T  L
Sbjct: 200 SQTFALSMSGTVFAWGRNNAGQLGFKNDAKKGTFKPYAVDSLRDLGVAYISCGEEHTAVL 259

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML--AVTGNGV 289
              G V+T G +T+GQLG         P+ I   E    V Q+A G  + L    T N +
Sbjct: 260 NKDGIVYTFGDDTYGQLGQQSGNQTSVPQKIE--EYSRQVSQVACGRYHTLLYVFTCNRI 317

Query: 290 VYSFGSGSNFCLGHGEQHDE 309
           V SFG GS    G+ E  D+
Sbjct: 318 V-SFGKGSQRQQGNDESSDQ 336


>gi|269973065|emb|CBE67077.1| CG9135-PA [Drosophila phaeopleura]
          Length = 486

 Score = 84.7 bits (208), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 63/226 (27%), Positives = 102/226 (45%), Gaps = 27/226 (11%)

Query: 122 HTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           HT+LI+ +      G +  G LG   +       T I      +VVQ +   +H  F+  
Sbjct: 126 HTILINMDRKAMGFGRNPSGQLGLSQDIKLVEKPTIIPALEQENVVQAAVGRHHTLFLTD 185

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           +G V+ CG+N S  CG  +T+  I+ P  +   +G P  ++  G  F+  L I+G++HT 
Sbjct: 186 TGTVYACGENKSGQCGVGNTHANIYSPTPIN-YRGPPIIRIGCGAEFSVILDIKGNLHTF 244

Query: 241 GSNTHGQLGHGDTLD------------RPTPKSI------------APLEEVGSVVQIAA 276
           G   +GQLGH                   +PK +             P++ V  +V  A 
Sbjct: 245 GLPEYGQLGHNTDAKYFVNANKLSFHFETSPKKVVLYIEKSKEGHVTPVDGV-QIVDFAC 303

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           G ++ +A+     VYS+G G    LGH E  DE+ PR ++ +  +G
Sbjct: 304 GNNHTVAIDSKKRVYSWGFGGFGRLGHAEPKDEMVPRLMKFYDAQG 349



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/211 (25%), Positives = 85/211 (40%), Gaps = 41/211 (19%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 219
           PSAAH + ++       F          G N S   G     + + +P ++ AL+     
Sbjct: 122 PSAAHTILINMDRKAMGF----------GRNPSGQLGLSQDIKLVEKPTIIPALEQENVV 171

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT---LDRPTPKSI-APLEEVGSVVQIA 275
           Q   G + T FLT  G V+ CG N  GQ G G+T   +  PTP +   P      +++I 
Sbjct: 172 QAAVGRHHTLFLTDTGTVYACGENKSGQCGVGNTHANIYSPTPINYRGP-----PIIRIG 226

Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ------------HDELQPRAIQTFRRK-- 321
            G  + + +   G +++FG      LGH               H E  P+ +  +  K  
Sbjct: 227 CGAEFSVILDIKGNLHTFGLPEYGQLGHNTDAKYFVNANKLSFHFETSPKKVVLYIEKSK 286

Query: 322 --------GIHVVRVSAGDEHVVALDSSGYV 344
                   G+ +V  + G+ H VA+DS   V
Sbjct: 287 EGHVTPVDGVQIVDFACGNNHTVAIDSKKRV 317


>gi|269972828|emb|CBE66994.1| CG9135-PA [Drosophila ananassae]
 gi|269972834|emb|CBE66997.1| CG9135-PA [Drosophila ananassae]
 gi|269972836|emb|CBE66998.1| CG9135-PA [Drosophila ananassae]
 gi|269972840|emb|CBE67000.1| CG9135-PA [Drosophila ananassae]
 gi|269972842|emb|CBE67001.1| CG9135-PA [Drosophila ananassae]
 gi|269972915|emb|CBE67002.1| CG9135-PA [Drosophila ananassae]
 gi|269972917|emb|CBE67003.1| CG9135-PA [Drosophila ananassae]
          Length = 486

 Score = 84.7 bits (208), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 63/226 (27%), Positives = 102/226 (45%), Gaps = 27/226 (11%)

Query: 122 HTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           HT+LI+ +      G +  G LG   +       T I      +VVQ +   +H  F+  
Sbjct: 126 HTILINMDRKAMGFGRNPSGQLGLSQDIKLVEKPTIIPALEQENVVQAAVGRHHTLFLTD 185

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           +G V+ CG+N S  CG  +T+  I+ P  +   +G P  ++  G  F+  L I+G++HT 
Sbjct: 186 TGTVYACGENKSGQCGVGNTHANIYTPTPIN-YRGPPIIRIGCGAEFSVILDIKGNLHTF 244

Query: 241 GSNTHGQLGHGDTLD------------RPTPKSI------------APLEEVGSVVQIAA 276
           G   +GQLGH                   +PK +             P++ V  +V  A 
Sbjct: 245 GLPEYGQLGHNTDAKYFVNANKLSFHFETSPKKVVLYIEKSKEGHVTPVDGV-QIVDFAC 303

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           G ++ +A+     VYS+G G    LGH E  DE+ PR ++ +  +G
Sbjct: 304 GNNHTVAIDSKKRVYSWGFGGFGRLGHAEPKDEMVPRLMKFYDAQG 349



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/211 (25%), Positives = 85/211 (40%), Gaps = 41/211 (19%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 219
           PSAAH + ++       F          G N S   G     + + +P ++ AL+     
Sbjct: 122 PSAAHTILINMDRKAMGF----------GRNPSGQLGLSQDIKLVEKPTIIPALEQENVV 171

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT---LDRPTPKSI-APLEEVGSVVQIA 275
           Q   G + T FLT  G V+ CG N  GQ G G+T   +  PTP +   P      +++I 
Sbjct: 172 QAAVGRHHTLFLTDTGTVYACGENKSGQCGVGNTHANIYTPTPINYRGP-----PIIRIG 226

Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ------------HDELQPRAIQTFRRK-- 321
            G  + + +   G +++FG      LGH               H E  P+ +  +  K  
Sbjct: 227 CGAEFSVILDIKGNLHTFGLPEYGQLGHNTDAKYFVNANKLSFHFETSPKKVVLYIEKSK 286

Query: 322 --------GIHVVRVSAGDEHVVALDSSGYV 344
                   G+ +V  + G+ H VA+DS   V
Sbjct: 287 EGHVTPVDGVQIVDFACGNNHTVAIDSKKRV 317


>gi|270001313|gb|EEZ97760.1| hect domain and RLD 2-like protein [Tribolium castaneum]
          Length = 816

 Score = 84.7 bits (208), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 64/228 (28%), Positives = 109/228 (47%), Gaps = 7/228 (3%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G+++  L  +  V+S G+   G LGHG  +T+    T I       ++ V     ++A +
Sbjct: 524 GKHYLALTKDYEVYSWGNGDGGRLGHGDTSTK-EEPTLIQALKGKDIIDVECGGTYSAAI 582

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI--RGH 236
             +G ++T G  +    GH  T      P ++ AL      +V  G  +   L I  +G 
Sbjct: 583 SANGALYTWGRGNYGRLGH-GTAEDCLTPTMISALSDEHIIKVACGSFYAHTLCITSQGK 641

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           V++ G   +G+LG G +     P+ I  L+ V  +VQ+  G  + +A++ +G VY++G G
Sbjct: 642 VYSWGDGDYGKLGRGGSDGSKLPRLIEKLQNV-KIVQVYCGAQFSVALSEDGHVYTWGKG 700

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             + LGH  + +   P  ++  R +   VV VS G  HV+AL   G V
Sbjct: 701 EGWKLGHPTEENVRFPEMVEVLRDR--KVVGVSLGVSHVLALTDQGEV 746



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 107/230 (46%), Gaps = 13/230 (5%)

Query: 104 SDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA 163
            DI++   G      G Y   + +N ++++ G    G LGHG     C++ T I+  S  
Sbjct: 567 KDIIDVECG------GTYSAAISANGALYTWGRGNYGRLGHG-TAEDCLTPTMISALSDE 619

Query: 164 HVVQVSASE--NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
           H+++V+      H   +   G+V++ GD      G   ++     PRL+E L+ V   QV
Sbjct: 620 HIIKVACGSFYAHTLCITSQGKVYSWGDGDYGKLGRGGSDGSKL-PRLIEKLQNVKIVQV 678

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
             G  F+  L+  GHV+T G     +LGH    +   P+ +  L +   VV ++ G S++
Sbjct: 679 YCGAQFSVALSEDGHVYTWGKGEGWKLGHPTEENVRFPEMVEVLRD-RKVVGVSLGVSHV 737

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
           LA+T  G VY +G   N  +    +    QPR I+    KG  VV V  G
Sbjct: 738 LALTDQGEVYGWGKNENKQICDSSELFVQQPRLIEAL--KGQKVVGVCCG 785



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 96/219 (43%), Gaps = 29/219 (13%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
           VF  G     + G GP+    +S   I         Q+  S+     + Q+G+VF    +
Sbjct: 448 VFGWGW-FSWIFGVGPQNCDTLSELTIK--------QICCSDRTILILTQTGKVFFMYYS 498

Query: 191 SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA---GLNFTGFLTIRGHVHTCGSNTHGQ 247
           S   C           P+ + AL      ++ A   G ++   LT    V++ G+   G+
Sbjct: 499 SDTQC-----------PQEMTALDDKEVIKIAAHPEGKHYLA-LTKDYEVYSWGNGDGGR 546

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 307
           LGHGDT  +  P  I  L+    ++ +  G +Y  A++ NG +Y++G G+   LGHG   
Sbjct: 547 LGHGDTSTKEEPTLIQALKG-KDIIDVECGGTYSAAISANGALYTWGRGNYGRLGHGTAE 605

Query: 308 DELQPRAIQTFRRKGIHVVRVSAGD--EHVVALDSSGYV 344
           D L P  I     +  H+++V+ G    H + + S G V
Sbjct: 606 DCLTPTMISALSDE--HIIKVACGSFYAHTLCITSQGKV 642


>gi|195342914|ref|XP_002038043.1| GM18595 [Drosophila sechellia]
 gi|195576918|ref|XP_002078320.1| GD23381 [Drosophila simulans]
 gi|194132893|gb|EDW54461.1| GM18595 [Drosophila sechellia]
 gi|194190329|gb|EDX03905.1| GD23381 [Drosophila simulans]
          Length = 487

 Score = 84.7 bits (208), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 27/226 (11%)

Query: 122 HTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           HT+LI+ +      G +  G LG   +       T I      ++VQ +   +H  F+  
Sbjct: 127 HTILINMDRKALGFGRNPSGQLGLSQDIKLAEKPTIIPALEQLNIVQAAVGRHHTLFLTD 186

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           +G V+ CG+N S  CG  +T+  I+ P  +   +G P  ++  G  F+  L I+G +HT 
Sbjct: 187 TGTVYACGENKSGQCGVGNTHANIYSPTPIN-YRGPPIIRIGCGAEFSVILDIKGSLHTF 245

Query: 241 GSNTHGQLGHGDTLD------------RPTPKS------------IAPLEEVGSVVQIAA 276
           G   +GQLGH                   +PK             + P++ V  +V  A 
Sbjct: 246 GLPEYGQLGHNTDAKYFVNANKLSFHFETSPKKVVLYIEKSKEGHVTPVDGV-QIVDFAC 304

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           G ++ +A+     VYS+G G    LGH E  DE+ PR ++ F  +G
Sbjct: 305 GNNHTVAIDSKKRVYSWGFGGFGRLGHAEPKDEMVPRLMKFFDTQG 350



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 54/211 (25%), Positives = 85/211 (40%), Gaps = 41/211 (19%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 219
           PSAAH + ++       F          G N S   G     +   +P ++ AL+ +   
Sbjct: 123 PSAAHTILINMDRKALGF----------GRNPSGQLGLSQDIKLAEKPTIIPALEQLNIV 172

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT---LDRPTPKSI-APLEEVGSVVQIA 275
           Q   G + T FLT  G V+ CG N  GQ G G+T   +  PTP +   P      +++I 
Sbjct: 173 QAAVGRHHTLFLTDTGTVYACGENKSGQCGVGNTHANIYSPTPINYRGP-----PIIRIG 227

Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ------------HDELQPRAIQTFRRK-- 321
            G  + + +   G +++FG      LGH               H E  P+ +  +  K  
Sbjct: 228 CGAEFSVILDIKGSLHTFGLPEYGQLGHNTDAKYFVNANKLSFHFETSPKKVVLYIEKSK 287

Query: 322 --------GIHVVRVSAGDEHVVALDSSGYV 344
                   G+ +V  + G+ H VA+DS   V
Sbjct: 288 EGHVTPVDGVQIVDFACGNNHTVAIDSKKRV 318


>gi|66810824|ref|XP_639119.1| regulator of chromosome condensation  domain-containing protein
            [Dictyostelium discoideum AX4]
 gi|60467743|gb|EAL65761.1| regulator of chromosome condensation  domain-containing protein
            [Dictyostelium discoideum AX4]
          Length = 2083

 Score = 84.7 bits (208), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 66/237 (27%), Positives = 106/237 (44%), Gaps = 21/237 (8%)

Query: 114  MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPE------TTQCVSFTRINFPSAAHVV 166
            ++++ G  H  LIS S  +F+ G +  G LGHG +      T + + F R   P    ++
Sbjct: 1221 IKVSCGWDHVALISESGELFTWGKNQSGQLGHGLDIGKIQTTPKRLEFFRGKSP----II 1276

Query: 167  QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
             V     H+  V     V++ G +     GH   +    RP+++E + G   + + AG  
Sbjct: 1277 MVECGGEHSICVDSDYVVYSWGQDKFGQLGHGTKSVSQNRPKIIEDISGQKIQAIAAGFA 1336

Query: 227  FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV------GSVVQIAAGPSY 280
             T  L   G +++ G    GQLGHG  + +  P  I     V      G + QIA G  +
Sbjct: 1337 HTIVLKKSGELYSFGYGDQGQLGHGSFVSKSIPTRIELNTIVGIQHGGGKITQIACGFGH 1396

Query: 281  MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             +  + NG VYS+G G    LGHG      +PR I+  +     V ++S G  + +A
Sbjct: 1397 SVICSDNGEVYSWGLGKQGQLGHGNYESIARPRLIEALK----GVTKISCGHFYTMA 1449



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 65/239 (27%), Positives = 106/239 (44%), Gaps = 18/239 (7%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVS 169
            + +  G  H++ + S+  V+S G    G LGHG   T+ VS  R   I   S   +  ++
Sbjct: 1276 IMVECGGEHSICVDSDYVVYSWGQDKFGQLGHG---TKSVSQNRPKIIEDISGQKIQAIA 1332

Query: 170  ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRL-VEALKGV-----PCKQVTA 223
            A   H   + +SG++++ G       GH          R+ +  + G+        Q+  
Sbjct: 1333 AGFAHTIVLKKSGELYSFGYGDQGQLGHGSFVSKSIPTRIELNTIVGIQHGGGKITQIAC 1392

Query: 224  GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            G   +   +  G V++ G    GQLGHG+      P+ I   E +  V +I+ G  Y +A
Sbjct: 1393 GFGHSVICSDNGEVYSWGLGKQGQLGHGNYESIARPRLI---EALKGVTKISCGHFYTMA 1449

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
             T    VYS+G G +  LGHG   +E  PR +  F +K  +V ++  G  H + L   G
Sbjct: 1450 TTDLKNVYSWGLGEHMKLGHGSDKNEATPRVVDFFIQK--NVSKIVCGLNHTITLTYPG 1506



 Score = 49.3 bits (116), Expect = 0.003,   Method: Composition-based stats.
 Identities = 50/237 (21%), Positives = 99/237 (41%), Gaps = 26/237 (10%)

Query: 87   NGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN-SSVFSCGSSLCGVLGHG 145
            +GN++ + R          ++E   G  +I+ G ++T+  ++  +V+S G      LGHG
Sbjct: 1419 HGNYESIAR--------PRLIEALKGVTKISCGHFYTMATTDLKNVYSWGLGEHMKLGHG 1470

Query: 146  PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF 205
             +  +      ++F    +V ++    NH   +   G +     N++      D N  I 
Sbjct: 1471 SDKNEATPRV-VDFFIQKNVSKIVCGLNHTITLTYPGDL-----NNNSLSNDDDVNDFID 1524

Query: 206  RPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-----VHTCGSNTHGQLGHGDTL-----D 255
                                  +G L +  +     ++ CG+  HG+LG G  L     D
Sbjct: 1525 LAPSTSNSSSSSSLTNDNNNGRSGRLGLNENSQVSPIYACGAGEHGKLGLGGDLKSPFFD 1584

Query: 256  RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQP 312
            +P P +I  +  + +++ I+ G  +   +T NG +Y +G G+   +G+G+  D   P
Sbjct: 1585 KPIPTAIKGVNAL-NLIDISCGTDFTAMITSNGALYVWGYGNFGQIGNGKTDDAWVP 1640



 Score = 39.3 bits (90), Expect = 2.5,   Method: Composition-based stats.
 Identities = 22/91 (24%), Positives = 49/91 (53%), Gaps = 7/91 (7%)

Query: 256  RPTPK----SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ 311
            +P P+     + PL+     ++++ G  ++  ++ +G ++++G   +  LGHG    ++Q
Sbjct: 1201 KPDPELMICPMPPLKNEKRAIKVSCGWDHVALISESGELFTWGKNQSGQLGHGLDIGKIQ 1260

Query: 312  --PRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
              P+ ++ FR K   ++ V  G EH + +DS
Sbjct: 1261 TTPKRLEFFRGKS-PIIMVECGGEHSICVDS 1290


>gi|194760185|ref|XP_001962322.1| GF14497 [Drosophila ananassae]
 gi|190616019|gb|EDV31543.1| GF14497 [Drosophila ananassae]
 gi|269972830|emb|CBE66995.1| CG9135-PA [Drosophila ananassae]
          Length = 486

 Score = 84.7 bits (208), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 63/226 (27%), Positives = 102/226 (45%), Gaps = 27/226 (11%)

Query: 122 HTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           HT+LI+ +      G +  G LG   +       T I      +VVQ +   +H  F+  
Sbjct: 126 HTILINMDRKAMGFGRNPSGQLGLSQDIKLVEKPTIIPALEQENVVQAAVGRHHTLFLTD 185

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           +G V+ CG+N S  CG  +T+  I+ P  +   +G P  ++  G  F+  L I+G++HT 
Sbjct: 186 TGTVYACGENKSGQCGVGNTHANIYTPTPIN-YRGPPIIRIGCGAEFSVILDIKGNLHTF 244

Query: 241 GSNTHGQLGHGDTLD------------RPTPKSI------------APLEEVGSVVQIAA 276
           G   +GQLGH                   +PK +             P++ V  +V  A 
Sbjct: 245 GLPEYGQLGHNTDAKYFVNANKLSFHFETSPKKVVLYIEKSKEGHVTPVDGV-QIVDFAC 303

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           G ++ +A+     VYS+G G    LGH E  DE+ PR ++ +  +G
Sbjct: 304 GNNHTVAIDSKKRVYSWGFGGFGRLGHAEPKDEMVPRLMKFYDAQG 349



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 54/211 (25%), Positives = 85/211 (40%), Gaps = 41/211 (19%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 219
           PSAAH + ++       F          G N S   G     + + +P ++ AL+     
Sbjct: 122 PSAAHTILINMDRKAMGF----------GRNPSGQLGLSQDIKLVEKPTIIPALEQENVV 171

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT---LDRPTPKSI-APLEEVGSVVQIA 275
           Q   G + T FLT  G V+ CG N  GQ G G+T   +  PTP +   P      +++I 
Sbjct: 172 QAAVGRHHTLFLTDTGTVYACGENKSGQCGVGNTHANIYTPTPINYRGP-----PIIRIG 226

Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ------------HDELQPRAIQTFRRK-- 321
            G  + + +   G +++FG      LGH               H E  P+ +  +  K  
Sbjct: 227 CGAEFSVILDIKGNLHTFGLPEYGQLGHNTDAKYFVNANKLSFHFETSPKKVVLYIEKSK 286

Query: 322 --------GIHVVRVSAGDEHVVALDSSGYV 344
                   G+ +V  + G+ H VA+DS   V
Sbjct: 287 EGHVTPVDGVQIVDFACGNNHTVAIDSKKRV 317


>gi|20129257|ref|NP_608985.1| CG9135, isoform A [Drosophila melanogaster]
 gi|24582121|ref|NP_723150.1| CG9135, isoform B [Drosophila melanogaster]
 gi|7297063|gb|AAF52332.1| CG9135, isoform A [Drosophila melanogaster]
 gi|16185397|gb|AAL13911.1| LD39815p [Drosophila melanogaster]
 gi|22945734|gb|AAN10577.1| CG9135, isoform B [Drosophila melanogaster]
 gi|116812093|emb|CAL26239.1| CG9135 [Drosophila melanogaster]
 gi|116812095|emb|CAL26240.1| CG9135 [Drosophila melanogaster]
 gi|116812097|emb|CAL26241.1| CG9135 [Drosophila melanogaster]
 gi|116812099|emb|CAL26242.1| CG9135 [Drosophila melanogaster]
 gi|116812101|emb|CAL26243.1| CG9135 [Drosophila melanogaster]
 gi|116812103|emb|CAL26244.1| CG9135 [Drosophila melanogaster]
 gi|116812105|emb|CAL26245.1| CG9135 [Drosophila melanogaster]
 gi|116812107|emb|CAL26246.1| CG9135 [Drosophila melanogaster]
 gi|116812109|emb|CAL26247.1| CG9135 [Drosophila melanogaster]
 gi|116812111|emb|CAL26248.1| CG9135 [Drosophila melanogaster]
 gi|220946256|gb|ACL85671.1| CG9135-PA [synthetic construct]
 gi|220955942|gb|ACL90514.1| CG9135-PA [synthetic construct]
 gi|223967143|emb|CAR93302.1| CG9135-PA [Drosophila melanogaster]
 gi|223967145|emb|CAR93303.1| CG9135-PA [Drosophila melanogaster]
 gi|223967147|emb|CAR93304.1| CG9135-PA [Drosophila melanogaster]
 gi|223967149|emb|CAR93305.1| CG9135-PA [Drosophila melanogaster]
 gi|223967151|emb|CAR93306.1| CG9135-PA [Drosophila melanogaster]
 gi|223967153|emb|CAR93307.1| CG9135-PA [Drosophila melanogaster]
 gi|223967155|emb|CAR93308.1| CG9135-PA [Drosophila melanogaster]
 gi|223967157|emb|CAR93309.1| CG9135-PA [Drosophila melanogaster]
 gi|223967159|emb|CAR93310.1| CG9135-PA [Drosophila melanogaster]
 gi|223967161|emb|CAR93311.1| CG9135-PA [Drosophila melanogaster]
 gi|223967163|emb|CAR93312.1| CG9135-PA [Drosophila melanogaster]
 gi|223967165|emb|CAR93313.1| CG9135-PA [Drosophila melanogaster]
          Length = 487

 Score = 84.7 bits (208), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 27/226 (11%)

Query: 122 HTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           HT+LI+ +      G +  G LG   +       T I      ++VQ +   +H  F+  
Sbjct: 127 HTILINMDRKALGFGRNPSGQLGLSQDIKLAEKPTIIPALEQLNIVQAAVGRHHTLFLTD 186

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           +G V+ CG+N S  CG  +T+  I+ P  +   +G P  ++  G  F+  L I+G +HT 
Sbjct: 187 TGTVYACGENKSGQCGVGNTHANIYSPTPIN-YRGPPIIRIGCGAEFSVILDIKGSLHTF 245

Query: 241 GSNTHGQLGHGDTLD------------RPTPKS------------IAPLEEVGSVVQIAA 276
           G   +GQLGH                   +PK             + P++ V  +V  A 
Sbjct: 246 GLPEYGQLGHNTDAKYFVNANKLSFHFETSPKKVVLYIEKSKEGHVTPVDGV-QIVDFAC 304

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           G ++ +A+     VYS+G G    LGH E  DE+ PR ++ F  +G
Sbjct: 305 GNNHTVAIDSKKRVYSWGFGGFGRLGHAEPKDEMVPRLMKFFDTQG 350



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 54/211 (25%), Positives = 85/211 (40%), Gaps = 41/211 (19%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 219
           PSAAH + ++       F          G N S   G     +   +P ++ AL+ +   
Sbjct: 123 PSAAHTILINMDRKALGF----------GRNPSGQLGLSQDIKLAEKPTIIPALEQLNIV 172

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT---LDRPTPKSI-APLEEVGSVVQIA 275
           Q   G + T FLT  G V+ CG N  GQ G G+T   +  PTP +   P      +++I 
Sbjct: 173 QAAVGRHHTLFLTDTGTVYACGENKSGQCGVGNTHANIYSPTPINYRGP-----PIIRIG 227

Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ------------HDELQPRAIQTFRRK-- 321
            G  + + +   G +++FG      LGH               H E  P+ +  +  K  
Sbjct: 228 CGAEFSVILDIKGSLHTFGLPEYGQLGHNTDAKYFVNANKLSFHFETSPKKVVLYIEKSK 287

Query: 322 --------GIHVVRVSAGDEHVVALDSSGYV 344
                   G+ +V  + G+ H VA+DS   V
Sbjct: 288 EGHVTPVDGVQIVDFACGNNHTVAIDSKKRV 318


>gi|302822159|ref|XP_002992739.1| hypothetical protein SELMODRAFT_430894 [Selaginella moellendorffii]
 gi|300139480|gb|EFJ06220.1| hypothetical protein SELMODRAFT_430894 [Selaginella moellendorffii]
          Length = 982

 Score = 84.7 bits (208), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 65/224 (29%), Positives = 101/224 (45%), Gaps = 16/224 (7%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G +HT L+S++  +F+ G    GVLGHG +    +    +        V+ +    H
Sbjct: 392 IACGAWHTALVSSAGQLFTFGDGTFGVLGHGDKRNLAIP-KEVESLKGLKTVRAACGIWH 450

Query: 175 AAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            A V++            SG++FT GD   +  GH D  + +  P  V AL     +QV 
Sbjct: 451 TAAVVEVIVGYSSATSCSSGKLFTWGDGDKYRLGHGDKEQKLV-PTCVAALVDYNFRQVA 509

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
            G + T  LT  G V T GS  +GQLG+    D   P  +        V +I  G  ++ 
Sbjct: 510 CGHSLTVALTTSGRVFTMGSTIYGQLGNPKA-DGKVPGMVDGELARTFVEEIGCGAHHVA 568

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
           A++    +Y++G G+N  LGHG+  D   P  ++  R K +  V
Sbjct: 569 ALSSKTEIYTWGKGANGRLGHGDVEDRTAPTLVEALRDKQVKTV 612



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 58/183 (31%), Positives = 95/183 (51%), Gaps = 10/183 (5%)

Query: 162 AAHVVQVSA---SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
           AA V+ VS+      HAA V + G VF  G+      GH   +  +  P+LV+AL GV  
Sbjct: 276 AAVVLDVSSIACGSRHAALVTKQGDVFCWGEEYGGRLGH-GIDVDVSEPQLVQALAGVNT 334

Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQIA 275
           + V  G   T  +T+ G ++T G++    G +GH + +    PK + +PLE V  +  IA
Sbjct: 335 ELVACGDFHTCAVTLSGELYTWGADAQSGGLVGHSNPVSHWMPKRMSSPLEGV-RISSIA 393

Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
            G  +   V+  G +++FG G+   LGHG++ +   P+ +++   KG+  VR + G  H 
Sbjct: 394 CGAWHTALVSSAGQLFTFGDGTFGVLGHGDKRNLAIPKEVESL--KGLKTVRAACGIWHT 451

Query: 336 VAL 338
            A+
Sbjct: 452 AAV 454



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 62/246 (25%), Positives = 102/246 (41%), Gaps = 32/246 (13%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSASE 172
           R+  L+     VF  G    G LGHG       P+  Q ++              V+  +
Sbjct: 290 RHAALVTKQGDVFCWGEEYGGRLGHGIDVDVSEPQLVQALAGVNTEL--------VACGD 341

Query: 173 NHAAFVLQSGQVFTCGDN--SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            H   V  SG+++T G +  S    GH +        R+   L+GV    +  G   T  
Sbjct: 342 FHTCAVTLSGELYTWGADAQSGGLVGHSNPVSHWMPKRMSSPLEGVRISSIACGAWHTAL 401

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE------------EVGSVVQIAAGP 278
           ++  G + T G  T G LGHGD  +   PK +  L+               +VV++  G 
Sbjct: 402 VSSAGQLFTFGDGTFGVLGHGDKRNLAIPKEVESLKGLKTVRAACGIWHTAAVVEVIVGY 461

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           S   + + +G ++++G G  + LGHG++  +L P  +        +  +V+ G    VAL
Sbjct: 462 SSATSCS-SGKLFTWGDGDKYRLGHGDKEQKLVPTCVAAL--VDYNFRQVACGHSLTVAL 518

Query: 339 DSSGYV 344
            +SG V
Sbjct: 519 TTSGRV 524



 Score = 41.6 bits (96), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 33/140 (23%), Positives = 65/140 (46%), Gaps = 4/140 (2%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ ++A   +    +  G      +T +G V   G    G+LGHG  +D   P+ +  L 
Sbjct: 271 PKALQAAVVLDVSSIACGSRHAALVTKQGDVFCWGEEYGGRLGHGIDVDVSEPQLVQALA 330

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSG--SNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            V + + +A G  +  AVT +G +Y++G+   S   +GH        P+ + +   +G+ 
Sbjct: 331 GVNTEL-VACGDFHTCAVTLSGELYTWGADAQSGGLVGHSNPVSHWMPKRMSS-PLEGVR 388

Query: 325 VVRVSAGDEHVVALDSSGYV 344
           +  ++ G  H   + S+G +
Sbjct: 389 ISSIACGAWHTALVSSAGQL 408


>gi|269973011|emb|CBE67050.1| CG9135-PA [Drosophila atripex]
          Length = 486

 Score = 84.7 bits (208), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 63/226 (27%), Positives = 102/226 (45%), Gaps = 27/226 (11%)

Query: 122 HTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           HT+LI+ +      G +  G LG   +       T I      +VVQ +   +H  F+  
Sbjct: 126 HTILINMDRKAMGFGRNPSGQLGLSQDIKLVEKPTIIPALEQENVVQAAVGRHHTLFLTD 185

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           +G V+ CG+N S  CG  +T+  I+ P  +   +G P  ++  G  F+  L I+G++HT 
Sbjct: 186 TGTVYACGENKSGQCGVGNTHANIYTPTPIN-YRGPPIIRIGCGAEFSVILDIKGNLHTF 244

Query: 241 GSNTHGQLGHGDTLD------------RPTPKSI------------APLEEVGSVVQIAA 276
           G   +GQLGH                   +PK +             P++ V  +V  A 
Sbjct: 245 GLPEYGQLGHNTDAKYFVNANKLSFHFETSPKKVVLYIEKSKEGHVTPVDGV-QIVDFAC 303

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           G ++ +A+     VYS+G G    LGH E  DE+ PR ++ +  +G
Sbjct: 304 GNNHTVAIDSKKRVYSWGFGGFGRLGHAEPKDEMVPRLMKFYDAQG 349



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 54/211 (25%), Positives = 85/211 (40%), Gaps = 41/211 (19%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 219
           PSAAH + ++       F          G N S   G     + + +P ++ AL+     
Sbjct: 122 PSAAHTILINMDRKAMGF----------GRNPSGQLGLSQDIKLVEKPTIIPALEQENVV 171

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT---LDRPTPKSI-APLEEVGSVVQIA 275
           Q   G + T FLT  G V+ CG N  GQ G G+T   +  PTP +   P      +++I 
Sbjct: 172 QAAVGRHHTLFLTDTGTVYACGENKSGQCGVGNTHANIYTPTPINYRGP-----PIIRIG 226

Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ------------HDELQPRAIQTFRRK-- 321
            G  + + +   G +++FG      LGH               H E  P+ +  +  K  
Sbjct: 227 CGAEFSVILDIKGNLHTFGLPEYGQLGHNTDAKYFVNANKLSFHFETSPKKVVLYIEKSK 286

Query: 322 --------GIHVVRVSAGDEHVVALDSSGYV 344
                   G+ +V  + G+ H VA+DS   V
Sbjct: 287 EGHVTPVDGVQIVDFACGNNHTVAIDSKKRV 317


>gi|198420568|ref|XP_002123770.1| PREDICTED: similar to guanine nucleotide exchange factor p532,
           partial [Ciona intestinalis]
          Length = 2540

 Score = 84.7 bits (208), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 75/244 (30%), Positives = 120/244 (49%), Gaps = 18/244 (7%)

Query: 110 SAGNMQ-ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ 167
           S GN Q +  G+Y T  +S +  V SCG    G LG G    Q  +   I F     + +
Sbjct: 313 SFGNSQMLEAGQYCTFAVSGDGCVRSCGKGSYGRLGLGDSNNQS-TLKTIVFDPPQTIRK 371

Query: 168 VSAS---ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE---ALKGVPCKQV 221
           +S+S   + H   +   G +F+ GD      GH  ++     P+++E   A + V C  V
Sbjct: 372 ISSSKGSDGHTLALTTEGCIFSWGDGDYGKLGH-GSSLTHKSPKIIEGPLARRIVVC--V 428

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
           +AG   +  +T  G + T G   +G+LG GD   R  P  +  +   GSVV    G S+ 
Sbjct: 429 SAGYRHSACVTQEGQLFTWGEGDYGRLGLGDNTSRNVPVLVKDIASAGSVV---CGSSHT 485

Query: 282 LAVTGNGV-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           L +  +G+ V+SFG+G N  LGHG+     +P+ I++    G+   ++ AG ++ +AL+ 
Sbjct: 486 LVLAQDGLTVWSFGAGDNGKLGHGDTSRVYRPKVIESI--NGMMFYKLCAGSQYSLALND 543

Query: 341 SGYV 344
           SG V
Sbjct: 544 SGQV 547



 Score = 72.4 bits (176), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 80/224 (35%), Positives = 110/224 (49%), Gaps = 19/224 (8%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL L +   +FS G    G LGHG   T   S   I  P A  +V  VSA   H+A V 
Sbjct: 381 HTLALTTEGCIFSWGDGDYGKLGHGSSLTH-KSPKIIEGPLARRIVVCVSAGYRHSACVT 439

Query: 180 QSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG-HV 237
           Q GQ+FT G+      G  D T+R +  P LV+ +       V  G + T  L   G  V
Sbjct: 440 QEGQLFTWGEGDYGRLGLGDNTSRNV--PVLVKDIASA--GSVVCGSSHTLVLAQDGLTV 495

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G+  +G+LGHGDT     PK I  +  +    ++ AG  Y LA+  +G V+S+G G+
Sbjct: 496 WSFGAGDNGKLGHGDTSRVYRPKVIESINGM-MFYKLCAGSQYSLALNDSGQVFSWGCGA 554

Query: 298 NFCLGHGEQHDE-LQPRAIQ--TFRRKGIHVVRVSAGDEHVVAL 338
             CLG G      ++P  I   TF R    VV +++GD H +AL
Sbjct: 555 --CLGCGSPDATFMKPTLIDELTFTR----VVDITSGDGHCMAL 592



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 86/185 (46%), Gaps = 9/185 (4%)

Query: 106 IVETSAGNMQITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA 163
           +V+  A    +  G  HTL+++    +V+S G+   G LGHG +T++      I   +  
Sbjct: 468 LVKDIASAGSVVCGSSHTLVLAQDGLTVWSFGAGDNGKLGHG-DTSRVYRPKVIESINGM 526

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
              ++ A   ++  +  SGQVF+ G  +   CG  D      +P L++ L       +T+
Sbjct: 527 MFYKLCAGSQYSLALNDSGQVFSWGCGACLGCGSPDAT--FMKPTLIDELTFTRVVDITS 584

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP--TPKSIAPLEEVGSVVQIAAGPSYM 281
           G      LT    V+  G+N  GQ G G T + P   P  +  L  V ++ QI+AG S+ 
Sbjct: 585 GDGHCMALTHNNEVYCWGNNAMGQCGLGHT-NSPISVPTQVQQLNNV-TIHQISAGTSHS 642

Query: 282 LAVTG 286
           +A T 
Sbjct: 643 IAYTA 647


>gi|269972838|emb|CBE66999.1| CG9135-PA [Drosophila ananassae]
          Length = 486

 Score = 84.7 bits (208), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 63/226 (27%), Positives = 102/226 (45%), Gaps = 27/226 (11%)

Query: 122 HTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           HT+LI+ +      G +  G LG   +       T I      +VVQ +   +H  F+  
Sbjct: 126 HTILINMDRKAMGFGRNPSGQLGLSQDIKLVEKPTIIPALEQENVVQAAVGRHHTLFLTD 185

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           +G V+ CG+N S  CG  +T+  I+ P  +   +G P  ++  G  F+  L I+G++HT 
Sbjct: 186 TGTVYACGENKSGQCGVGNTHANIYTPTPIN-YRGPPIIRIGCGAEFSVILDIKGNLHTF 244

Query: 241 GSNTHGQLGHGDTLD------------RPTPKSI------------APLEEVGSVVQIAA 276
           G   +GQLGH                   +PK +             P++ V  +V  A 
Sbjct: 245 GLPEYGQLGHNTDAKYFVNANKLSFHFETSPKKVVLYIEKSKEGHVTPVDGV-QIVDFAC 303

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           G ++ +A+     VYS+G G    LGH E  DE+ PR ++ +  +G
Sbjct: 304 GNNHTVAIDSKKRVYSWGFGGFGRLGHAEPKDEMVPRLMKFYDAQG 349



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/211 (25%), Positives = 85/211 (40%), Gaps = 41/211 (19%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 219
           PSAAH + ++       F          G N S   G     + + +P ++ AL+     
Sbjct: 122 PSAAHTILINMDRKAMGF----------GRNPSGQLGLSQDIKLVEKPTIIPALEQENVV 171

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT---LDRPTPKSI-APLEEVGSVVQIA 275
           Q   G + T FLT  G V+ CG N  GQ G G+T   +  PTP +   P      +++I 
Sbjct: 172 QAAVGRHHTLFLTDTGTVYACGENKSGQCGVGNTHANIYTPTPINYRGP-----PIIRIG 226

Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ------------HDELQPRAIQTFRRK-- 321
            G  + + +   G +++FG      LGH               H E  P+ +  +  K  
Sbjct: 227 CGAEFSVILDIKGNLHTFGLPEYGQLGHNTDAKYFVNANKLSFHFETSPKKVVLYIEKSK 286

Query: 322 --------GIHVVRVSAGDEHVVALDSSGYV 344
                   G+ +V  + G+ H VA+DS   V
Sbjct: 287 EGHVTPVDGVQIVDFACGNNHTVAIDSKKRV 317


>gi|444916978|ref|ZP_21237086.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444711624|gb|ELW52563.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 734

 Score = 84.3 bits (207), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 78/236 (33%), Positives = 114/236 (48%), Gaps = 16/236 (6%)

Query: 111 AGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G + +  G  H+L++ S+ +V+S G ++ G LG G    +  S  ++++ S      VS
Sbjct: 334 SGGVTLVAGYKHSLVLRSDGTVWSWGDNVFGQLGDGTFNPRS-SAVKVSWLSLGRA-DVS 391

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK-QVTAGLNFT 228
           + + H+  +  +G V+  GDN S   G+           LV A  G+     V+AG   T
Sbjct: 392 SGQLHSVVLDSNGAVWAWGDNYSGQLGN-----GTGLDSLVAAPVGLGGSVAVSAGFKHT 446

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
             L     V   G N HGQLG G   DR  P  +A L  V +V   +AG  + LA+  NG
Sbjct: 447 LVLKADTTVWAWGVNEHGQLGDGTLTDRTRPVQVAGLSGVSAV---SAGSYHSLALRSNG 503

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            V+++G      LG G   D LQP  +Q     G  VV V+AGD H +AL S G V
Sbjct: 504 TVWAWGFNRYGQLGDGTNTDRLQP--VQVAGLSG--VVAVAAGDSHSLALRSDGTV 555



 Score = 72.4 bits (176), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 68/239 (28%), Positives = 109/239 (45%), Gaps = 15/239 (6%)

Query: 107 VETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV 165
           V   +G + + +G YH+L L S+ +V++ G +  G LG+G   T   S   +   + + V
Sbjct: 82  VTNLSGVVSVASGDYHSLGLSSDGTVWAWGDNTAGQLGNG---TASASPVPVRVQNLSGV 138

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
           V + +  +H   +   G V+  GDN     G+    R    P  V  L GV    V AG 
Sbjct: 139 VSLGSGFSHGLALRSDGTVWAWGDNRYNQLGNVGATRSNL-PVQVPGLSGVIA--VVAGG 195

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            ++  L   G V   G N +GQLG G T  R  P  +  L     V+ ++AG  + +A+ 
Sbjct: 196 YYSLALRSDGTVWAWGDNRYGQLGDGTTTQRAVPVQVLNLS---GVMNLSAGSFHTVALR 252

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            +G V+++G  +   LG G      QP  +         V+ + AG+ H +A+ S G V
Sbjct: 253 SDGSVWAWGFNAYGQLGDGTTTSRFQPVQVGLS-----DVLTLVAGNYHSLAVRSDGAV 306



 Score = 64.3 bits (155), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 75/237 (31%), Positives = 109/237 (45%), Gaps = 17/237 (7%)

Query: 110 SAGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV 168
           S G   +++G+ H++++ SN +V++ G +  G LG+G      V+   +    +   V V
Sbjct: 384 SLGRADVSSGQLHSVVLDSNGAVWAWGDNYSGQLGNGTGLDSLVA-APVGLGGS---VAV 439

Query: 169 SASENHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNF 227
           SA   H   +     V+  G N     G    T+R   RP  V  L GV    V+AG   
Sbjct: 440 SAGFKHTLVLKADTTVWAWGVNEHGQLGDGTLTDRT--RPVQVAGLSGVSA--VSAGSYH 495

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           +  L   G V   G N +GQLG G   DR  P  +A L     VV +AAG S+ LA+  +
Sbjct: 496 SLALRSNGTVWAWGFNRYGQLGDGTNTDRLQPVQVAGLS---GVVAVAAGDSHSLALRSD 552

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G V+++G   +  +G G       P  +Q        VV VSAG  H +AL S G V
Sbjct: 553 GTVWAWGYNFDGQIGDGSYSWRFLP--VQVVGLS--GVVSVSAGGYHSLALRSDGTV 605



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 97/207 (46%), Gaps = 17/207 (8%)

Query: 111 AGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G + +  G  H+L L S+ +V++ G +  G +G G  + +   F  +     + VV VS
Sbjct: 534 SGVVAVAAGDSHSLALRSDGTVWAWGYNFDGQIGDGSYSWR---FLPVQVVGLSGVVSVS 590

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDT--NRPIFRPRLVEALKGVPCKQVTAGLNF 227
           A   H+  +   G V+T G N S   G   T  N+P   P  V  L GV    V+ G   
Sbjct: 591 AGGYHSLALRSDGTVWTWGYNGSGQLGDGSTAINKPA--PVQVAGLSGV----VSLGSGN 644

Query: 228 TGFLTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
              L +R  G V   G N  GQLG G  L+R TP  ++ L     VV + AG  + LA  
Sbjct: 645 YHSLGLRSDGTVWAWGFNFDGQLGDGSLLNRSTPVRVSGLS---GVVSVVAGDYHSLARR 701

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQP 312
            +G V+++G      LG G ++D L P
Sbjct: 702 SDGTVWAWGYNGEGQLGDGTRNDTLVP 728



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 53/110 (48%), Gaps = 7/110 (6%)

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G V   G N  GQLG G  +D PTP  +  L     VV +A+G  + L ++ +G V+++G
Sbjct: 55  GTVWAWGFNRQGQLGDGTLVDSPTPVRVTNLS---GVVSVASGDYHSLGLSSDGTVWAWG 111

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             +   LG+G       P  +Q        VV + +G  H +AL S G V
Sbjct: 112 DNTAGQLGNGTASASPVPVRVQNLS----GVVSLGSGFSHGLALRSDGTV 157


>gi|405355587|ref|ZP_11024762.1| hypothetical protein A176_0896 [Chondromyces apiculatus DSM 436]
 gi|397091294|gb|EJJ22112.1| hypothetical protein A176_0896 [Myxococcus sp. (contaminant ex DSM
           436)]
          Length = 1473

 Score = 84.3 bits (207), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 78/232 (33%), Positives = 106/232 (45%), Gaps = 13/232 (5%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           M+I  G  H+L ++   +V++ G +  G LG    + Q +S  R+  P    +V V + +
Sbjct: 69  MRIAAGAQHSLFLTPTGAVWAWGGNSAGQLGGADTSFQRLSPARL--PVLEDIVSVVSGD 126

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +   G V+T G NSS   G   T      P+ VE    V    V AG   +  L 
Sbjct: 127 AHSLALGADGTVWTWGSNSSGQLGD-GTTTDRAEPQRVEGFTDVVA--VAAGDFHSLVLK 183

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G V   G+N HGQLG G T     PK +  LE    VV +AAG  + LAV  +G V S
Sbjct: 184 SDGTVWAWGTNFHGQLGQGHTQTGLWPKPVPGLE---GVVALAAGFDFTLAVHADGAVSS 240

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           +G+ S   LG G     L P  I T       +  V+AG  H VAL   G V
Sbjct: 241 WGANSFGQLGLGTFTQRLSPERIPTLS----GITSVAAGTYHAVALGKDGTV 288



 Score = 78.2 bits (191), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 75/252 (29%), Positives = 115/252 (45%), Gaps = 19/252 (7%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQ-CVSF 154
            + Q V   SD+   +AG       ++   +  + + FS GS+  G LG G    +   + 
Sbjct: 1060 WPQRVAELSDVESVAAGE------QFSVAVAHDGTAFSWGSNEYGQLGDGKTGPRLSPAE 1113

Query: 155  TRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK 214
             +I    A  VV V A   HA  ++  G +   GDN++   G   T R   R    E ++
Sbjct: 1114 VKIGGSKARTVVTVGAWGQHAVALMADGTLQAWGDNATGQLGDGTTTR---RSSPGE-IR 1169

Query: 215  GVP-CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            GV     V+ G   +  L + G V   G+N  GQLG G T  R  P    P++ +  VV 
Sbjct: 1170 GVTRVTAVSTGAWHSLALRLDGTVWAWGANGFGQLGDGTTTARAVP---VPVQGLRDVVA 1226

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            IAAG  + +AV  +G V+++G  +   LG G       P  +Q  + +G+    V+ GD 
Sbjct: 1227 IAAGGYHSVAVRSDGTVWTWGYNTFGQLGDGTSESRALP--VQVHKLEGVQA--VTGGDH 1282

Query: 334  HVVALDSSGYVS 345
            H +AL + G VS
Sbjct: 1283 HSLALHADGTVS 1294



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 85/307 (27%), Positives = 134/307 (43%), Gaps = 40/307 (13%)

Query: 50  PQKFRSLVDLAASQLCALHS--------IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSV 100
           PQ+     D+ A      HS        ++A G + + Q+   +   G W + +  L+ V
Sbjct: 160 PQRVEGFTDVVAVAAGDFHSLVLKSDGTVWAWGTNFHGQLGQGHTQTGLWPKPVPGLEGV 219

Query: 101 EHSSDIVETSAGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINF 159
                        + +  G   TL + ++ +V S G++  G LG G   TQ +S  RI  
Sbjct: 220 -------------VALAAGFDFTLAVHADGAVSSWGANSFGQLGLG-TFTQRLSPERI-- 263

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPC 218
           P+ + +  V+A   HA  + + G V+T G NSS   G    N R +  P     L GV  
Sbjct: 264 PTLSGITSVAAGTYHAVALGKDGTVWTWGSNSSGQLGDGTWNDRAVPAP-----LPGVGG 318

Query: 219 KQVTAGLNFTGFLTIRG-HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG 277
            +  A L+      + G  V   G+N  GQLG GDT DR TP S+ P  E+ +V  +  G
Sbjct: 319 ARAVASLDAGSLALLEGGDVLAWGANNSGQLGDGDTADRSTP-SLVP--ELSAVTAVVGG 375

Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             + LA+  +G ++++G G    LGHG     + P  +        +V  ++ G  H +A
Sbjct: 376 AQHALALRKDGTLWAWGGGLAGQLGHGGSERHVVPATVMGL----TNVTSMATGSFHSLA 431

Query: 338 LDSSGYV 344
               G V
Sbjct: 432 ALEDGSV 438



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 76/279 (27%), Positives = 112/279 (40%), Gaps = 62/279 (22%)

Query: 116 ITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           + TG +H+L  + + SV++ G +  G LG G  T + V       PS   V  V+A+ +H
Sbjct: 422 MATGSFHSLAALEDGSVWAWGRNSYGQLGDGTVTERHVPVRVPGLPS---VRAVAAAGHH 478

Query: 175 AAFVLQSGQVFTCGDNSSFCCGH---RDTNRPI--------------------------- 204
           +  V   G V+T G N++   G    RD  RP+                           
Sbjct: 479 SIAVAMDGTVWTWGRNAAGQLGDGTTRDRARPVAVSGLTSVLAIAAGGSHVLALRSDGDV 538

Query: 205 -------------------FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH 245
                                P  V  L   P + V AG  F+  L   G V T G    
Sbjct: 539 WAWGYNALGQLGDGTSGDKLTPVRVPGL--APIQSVAAGTYFSMALANDGTVWTWGEGFE 596

Query: 246 GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
           GQLG G  + R +P ++  L +   +  I+ G ++ LAV G+G V+++G  +   LG G 
Sbjct: 597 GQLGDGGGVQRLSPVAVKGLSD---IRNISVGSAHALAVRGDGTVWAWGDNNEGQLGDGS 653

Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             D   P  +Q     GI    VS G  H +AL + G V
Sbjct: 654 WMDRFAP--VQVRNLTGI--TAVSGGRSHSLALHADGTV 688



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 72/235 (30%), Positives = 111/235 (47%), Gaps = 24/235 (10%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  H L L  + ++++ G  L G LGHG      V  T +      +V  ++    H
Sbjct: 372 VVGGAQHALALRKDGTLWAWGGGLAGQLGHGGSERHVVPATVMGL---TNVTSMATGSFH 428

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRD-TNR--PIFRPRLVEALKGVP-CKQVTAGLNFTGF 230
           +   L+ G V+  G NS    G    T R  P+  P       G+P  + V A  + +  
Sbjct: 429 SLAALEDGSVWAWGRNSYGQLGDGTVTERHVPVRVP-------GLPSVRAVAAAGHHSIA 481

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           + + G V T G N  GQLG G T DR  P +++ L    SV+ IAAG S++LA+  +G V
Sbjct: 482 VAMDGTVWTWGRNAAGQLGDGTTRDRARPVAVSGLT---SVLAIAAGGSHVLALRSDGDV 538

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYV 344
           +++G  +   LG G   D+L P      R  G+  ++ V+AG    +AL + G V
Sbjct: 539 WAWGYNALGQLGDGTSGDKLTP-----VRVPGLAPIQSVAAGTYFSMALANDGTV 588



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 72/231 (31%), Positives = 104/231 (45%), Gaps = 11/231 (4%)

Query: 114  MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            M I  G  H L +  + +V++ G++  G LG G ET    S           V  V+A  
Sbjct: 920  MVIALGESHALAVGEDGTVWAWGANASGQLGDGGETP---SLLPARVKGLEGVGSVAAGR 976

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
              +  V   G  +  G N S   G   +N+    P  V ++KG+  + V+AG +    L 
Sbjct: 977  AFSLAVRDDGTAWAWGANESGQLGD-GSNQSRRVPHRVASVKGL--RAVSAGAHHAMALG 1033

Query: 233  IRGHVHTCGSNTHGQLGHGDT-LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
              G V   G NT GQLG G +      P+ +A L +V SV   AAG  + +AV  +G  +
Sbjct: 1034 EDGAVWAWGDNTLGQLGDGTSAFTVMWPQRVAELSDVESV---AAGEQFSVAVAHDGTAF 1090

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            S+GS     LG G+    L P  ++    K   VV V A  +H VAL + G
Sbjct: 1091 SWGSNEYGQLGDGKTGPRLSPAEVKIGGSKARTVVTVGAWGQHAVALMADG 1141



 Score = 71.2 bits (173), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 52/138 (37%), Positives = 75/138 (54%), Gaps = 11/138 (7%)

Query: 208 RLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT-LDRPTPKSIAPLE 266
           RL E L   P + + AG   + FLT  G V   G N+ GQLG  DT   R +P  +  LE
Sbjct: 61  RLAEPLS--PMR-IAAGAQHSLFLTPTGAVWAWGGNSAGQLGGADTSFQRLSPARLPVLE 117

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
           ++ SVV   +G ++ LA+  +G V+++GS S+  LG G   D  +P+ ++ F      VV
Sbjct: 118 DIVSVV---SGDAHSLALGADGTVWTWGSNSSGQLGDGTTTDRAEPQRVEGF----TDVV 170

Query: 327 RVSAGDEHVVALDSSGYV 344
            V+AGD H + L S G V
Sbjct: 171 AVAAGDFHSLVLKSDGTV 188



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/181 (30%), Positives = 84/181 (46%), Gaps = 12/181 (6%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC-KQVTA 223
           V +++A   HA  V   G V   G N+S   G   T       R V  ++GV C + V +
Sbjct: 769 VERLAAGRAHALLVRADGSVVAWGANASGQLGDGGTTHGA---RAVT-VRGVSCARSVAS 824

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G   +  L   G V T G N  GQLG G T  R  P  +  LE    +V +A G    LA
Sbjct: 825 GGQHSLVLACDGTVWTWGENQRGQLGDGTTSARVAPGRVEGLE---GIVAVAGGGDTSLA 881

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           +  +G V+++G+ ++  +G G   D L PR I+        V+ ++ G+ H +A+   G 
Sbjct: 882 LRSDGTVWAWGANASGQVGDGTVEDRLTPRRIEALS----DVMVIALGESHALAVGEDGT 937

Query: 344 V 344
           V
Sbjct: 938 V 938



 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 58/196 (29%), Positives = 88/196 (44%), Gaps = 12/196 (6%)

Query: 112  GNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
            G   +T G +H+L + ++ +V   G +  G LG G  T +   +T +       + +V A
Sbjct: 1273 GVQAVTGGDHHSLALHADGTVSGWGHNASGQLGDGSRTDR---YTPVRLKDVDGLTEVRA 1329

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV-EALKGVPCKQVTAGLNFTG 229
               H   + + G V+T GDN+    G   T     R RLV + + G+P         +  
Sbjct: 1330 GAAHTVALGKDGTVWTWGDNAHGQLGDGVTGP---RMRLVPKPVSGLPAATAIGAGAWHS 1386

Query: 230  FLT-IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
            F +       T G N+HGQLG GD   R  P+ +  L     +  IA G    LA+T  G
Sbjct: 1387 FASGPEEGAFTWGRNSHGQLGVGDNAPRAEPQRMKLLS---GLKVIAGGADTSLAMTQEG 1443

Query: 289  VVYSFGSGSNFCLGHG 304
            V+ S+GS  +  LG G
Sbjct: 1444 VLMSWGSSLHGTLGLG 1459



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 98/228 (42%), Gaps = 17/228 (7%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            G++   L+++ ++ + G +  G LG G  TT+  S   I       V  VS    H+  +
Sbjct: 1131 GQHAVALMADGTLQAWGDNATGQLGDG-TTTRRSSPGEIR--GVTRVTAVSTGAWHSLAL 1187

Query: 179  LQSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
               G V+  G N     G   T  R +  P  V+ L+ V    + AG   +  +   G V
Sbjct: 1188 RLDGTVWAWGANGFGQLGDGTTTARAV--PVPVQGLRDVVA--IAAGGYHSVAVRSDGTV 1243

Query: 238  HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
             T G NT GQLG G +  R  P  +  LE V +V     G  + LA+  +G V  +G  +
Sbjct: 1244 WTWGYNTFGQLGDGTSESRALPVQVHKLEGVQAVT---GGDHHSLALHADGTVSGWGHNA 1300

Query: 298  NFCLGHGEQHDELQPRAIQTFRRKGIH-VVRVSAGDEHVVALDSSGYV 344
            +  LG G + D   P      R K +  +  V AG  H VAL   G V
Sbjct: 1301 SGQLGDGSRTDRYTP-----VRLKDVDGLTEVRAGAAHTVALGKDGTV 1343



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 97/219 (44%), Gaps = 20/219 (9%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            + I  G YH++ + S+ +V++ G +  G LG G   ++ +    +       V  V+  +
Sbjct: 1225 VAIAAGGYHSVAVRSDGTVWTWGYNTFGQLGDGTSESRALP---VQVHKLEGVQAVTGGD 1281

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
            +H+  +   G V   G N+S   G    T+R  + P  ++ + G+   +V AG   T  L
Sbjct: 1282 HHSLALHADGTVSGWGHNASGQLGDGSRTDR--YTPVRLKDVDGL--TEVRAGAAHTVAL 1337

Query: 232  TIRGHVHTCGSNTHGQLGHGDTLDR----PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
               G V T G N HGQLG G T  R    P P S  P     +   I AG  +  A    
Sbjct: 1338 GKDGTVWTWGDNAHGQLGDGVTGPRMRLVPKPVSGLP-----AATAIGAGAWHSFASGPE 1392

Query: 288  GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
               +++G  S+  LG G+     +P+ ++     G+ V+
Sbjct: 1393 EGAFTWGRNSHGQLGVGDNAPRAEPQRMKLL--SGLKVI 1429



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 57/230 (24%), Positives = 95/230 (41%), Gaps = 14/230 (6%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G Y ++ ++N  +V++ G    G LG G    +    + +     + +  +S    H
Sbjct: 572 VAAGTYFSMALANDGTVWTWGEGFEGQLGDGGGVQR---LSPVAVKGLSDIRNISVGSAH 628

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           A  V   G V+  GDN+    G   +    F P  V  L G+    V+ G + +  L   
Sbjct: 629 ALAVRGDGTVWAWGDNNEGQLGD-GSWMDRFAPVQVRNLTGITA--VSGGRSHSLALHAD 685

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G V   GSN +GQLG G    R  P  I  L     +  +  G  ++LA+  +  +  +G
Sbjct: 686 GTVRAWGSNGYGQLGDGTLTSRVLPSVIPGLS---GIQALHPGHLHVLALHADKTLRGWG 742

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
                 LG G      +P  ++   R    V R++AG  H + + + G V
Sbjct: 743 YNRFGQLGLGAAGWSARPVQVRGIGR----VERLAAGRAHALLVRADGSV 788


>gi|242059927|ref|XP_002459109.1| hypothetical protein SORBIDRAFT_03g046020 [Sorghum bicolor]
 gi|241931084|gb|EES04229.1| hypothetical protein SORBIDRAFT_03g046020 [Sorghum bicolor]
          Length = 892

 Score = 84.3 bits (207), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 59/192 (30%), Positives = 97/192 (50%), Gaps = 7/192 (3%)

Query: 150 QCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRL 209
            C+    + F     V  +S    HAA V + G++++ G+ S    GH   +  + +P+L
Sbjct: 97  DCLVPKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGH-GVDCDVSQPKL 155

Query: 210 VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLE 266
           ++AL  +  + V  G   T  +T+ G ++T G  T   G LGHG+ +    PK +  PLE
Sbjct: 156 IDALSHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKHVNGPLE 215

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
            +  V  I+ GP +   VT  G +++FG GS   LGHG++     PR +++   KG+  V
Sbjct: 216 GI-HVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRESISVPREVESL--KGLRTV 272

Query: 327 RVSAGDEHVVAL 338
           R + G  H  A+
Sbjct: 273 RAACGVWHTAAV 284



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 103/225 (45%), Gaps = 18/225 (8%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           I+ G +HT L++++  +F+ G    GVLGHG    + +S  R +        V+ +    
Sbjct: 222 ISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDR--ESISVPREVESLKGLRTVRAACGVW 279

Query: 174 HAAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
           H A V++            SG++FT GD      GH D    +  P  V AL      QV
Sbjct: 280 HTAAVVEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKEAKLV-PTCVAALVEPNFCQV 338

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
             G   T  LT  GHV+T GS  +GQLG+    D   P  +        V +I+ G  ++
Sbjct: 339 ACGHCLTVALTTSGHVYTMGSAVYGQLGNTQA-DGMLPVRVEGKLHKNFVEEISCGAYHV 397

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
             +T    VY++G G+N  LGHG+  D+  P  ++  + K +  V
Sbjct: 398 AVLTSRTEVYTWGKGANGRLGHGDTDDKNTPTLVEALKDKQVRSV 442



 Score = 54.7 bits (130), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 69/138 (50%), Gaps = 4/138 (2%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E    +  + ++ G      +T +G +++ G  + G+LGHG   D   PK I  L 
Sbjct: 101 PKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVSQPKLIDALS 160

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPRAIQTFRRKGIH 324
            + ++  +A G  +  AVT +G +Y++G G+  F  LGHG       P+ +     +GIH
Sbjct: 161 HM-NIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKHVNG-PLEGIH 218

Query: 325 VVRVSAGDEHVVALDSSG 342
           V  +S G  H   + S+G
Sbjct: 219 VSSISCGPWHTALVTSAG 236



 Score = 47.0 bits (110), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 51/183 (27%), Positives = 81/183 (44%), Gaps = 11/183 (6%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQC 151
           R +R    V H++ +VE  AGN   +         S+  +F+ G    G LGHG +  + 
Sbjct: 270 RTVRAACGVWHTAAVVEVMAGNSSSSN-------CSSGKIFTWGDGDKGRLGHGDKEAKL 322

Query: 152 VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE 211
           V  T +      +  QV+        +  SG V+T G       G+   +  +   R+  
Sbjct: 323 VP-TCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGNTQADG-MLPVRVEG 380

Query: 212 ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE--VG 269
            L     ++++ G      LT R  V+T G   +G+LGHGDT D+ TP  +  L++  V 
Sbjct: 381 KLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDKNTPTLVEALKDKQVR 440

Query: 270 SVV 272
           SVV
Sbjct: 441 SVV 443



 Score = 44.7 bits (104), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 59/127 (46%), Gaps = 9/127 (7%)

Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH---VVQVSA 170
           Q+  G   T+ ++ S  V++ GS++ G LG+    TQ      +      H   V ++S 
Sbjct: 337 QVACGHCLTVALTTSGHVYTMGSAVYGQLGN----TQADGMLPVRVEGKLHKNFVEEISC 392

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
              H A +    +V+T G  ++   GH DT+     P LVEALK    + V  G+NFT  
Sbjct: 393 GAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDK-NTPTLVEALKDKQVRSVVCGINFTAA 451

Query: 231 LTIRGHV 237
           + I   V
Sbjct: 452 ICIHKWV 458


>gi|196004949|ref|XP_002112341.1| hypothetical protein TRIADDRAFT_56257 [Trichoplax adhaerens]
 gi|190584382|gb|EDV24451.1| hypothetical protein TRIADDRAFT_56257 [Trichoplax adhaerens]
          Length = 794

 Score = 84.3 bits (207), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 67/239 (28%), Positives = 118/239 (49%), Gaps = 25/239 (10%)

Query: 116 ITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ------V 168
           +  GR+HTL +++S+ ++S G    G LGHG ET        +N P++   ++      +
Sbjct: 92  VAAGRFHTLAVTDSNKLYSFGQGSEGALGHGDETD-------LNMPTSIESLEDKDVNII 144

Query: 169 SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
           +    H+A + ++G+++  G NS    G +  N  I  P +++  K V    V  G   T
Sbjct: 145 ACGGYHSAAITKNGELYIWGSNSEGQLGLK--NDTISYPTMLDLGKSVIS--VACGYYHT 200

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRP--TPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
             +T  G ++T G    G+LG GD        PK +  +   G VV++A G ++ +A+T 
Sbjct: 201 AVVTADGKLYTFGETEGGKLGLGDIEAHKVTKPKVVKGIS--GKVVKVACGGNHTVALTA 258

Query: 287 NGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           +G VY+FGSG N  LG G +  D   P+ ++   ++ I    ++ G+ H   +   G +
Sbjct: 259 SGQVYTFGSGQNGQLGLGSKIMDSNIPKLVEALSKRKIK--HIACGESHTAVVSDKGEL 315



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 71/235 (30%), Positives = 111/235 (47%), Gaps = 18/235 (7%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G  HT++++ N  +F+ G++  G LG G   T+    T +       +  V+A   H
Sbjct: 40  IACGDEHTVVVTENGRLFTFGNNEWGQLGIGSNKTRNKPTT-VKALKPEKITHVAAGRFH 98

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V  S ++++ G  S    GH D    +  P  +E+L+      +  G   +  +T  
Sbjct: 99  TLAVTDSNKLYSFGQGSEGALGHGDET-DLNMPTSIESLEDKDVNIIACGGYHSAAITKN 157

Query: 235 GHVHTCGSNTHGQLG-HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
           G ++  GSN+ GQLG   DT+  PT      L+   SV+ +A G  +   VT +G +Y+F
Sbjct: 158 GELYIWGSNSEGQLGLKNDTISYPTM-----LDLGKSVISVACGYYHTAVVTADGKLYTF 212

Query: 294 GS--GSNFCLGHGEQHDELQPRAIQTFRRKGI--HVVRVSAGDEHVVALDSSGYV 344
           G   G    LG  E H   +P+ +     KGI   VV+V+ G  H VAL +SG V
Sbjct: 213 GETEGGKLGLGDIEAHKVTKPKVV-----KGISGKVVKVACGGNHTVALTASGQV 262



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 60/198 (30%), Positives = 95/198 (47%), Gaps = 17/198 (8%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS----AAHVVQVSA 170
           I  G YH+  I+ N  ++  GS+  G LG   +T        I++P+       V+ V+ 
Sbjct: 144 IACGGYHSAAITKNGELYIWGSNSEGQLGLKNDT--------ISYPTMLDLGKSVISVAC 195

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              H A V   G+++T G+      G  D     + +P++V+ + G   K V  G N T 
Sbjct: 196 GYYHTAVVTADGKLYTFGETEGGKLGLGDIEAHKVTKPKVVKGISGKVVK-VACGGNHTV 254

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDT-LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
            LT  G V+T GS  +GQLG G   +D   PK +  L +   +  IA G S+   V+  G
Sbjct: 255 ALTASGQVYTFGSGQNGQLGLGSKIMDSNIPKLVEALSKR-KIKHIACGESHTAVVSDKG 313

Query: 289 VVYSFGSGSNFCLGHGEQ 306
            +++FG G +  LG G++
Sbjct: 314 ELFTFGDGRHGKLGQGDE 331



 Score = 68.6 bits (166), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 83/167 (49%), Gaps = 14/167 (8%)

Query: 178 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
           + ++G VFT G  S F  G   TN+   R    + +  + C     G   T  +T  G +
Sbjct: 8   IPETGAVFTFG-KSRF--GDNRTNKFWIRS---DKVTDIAC-----GDEHTVVVTENGRL 56

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            T G+N  GQLG G    R  P ++  L+    +  +AAG  + LAVT +  +YSFG GS
Sbjct: 57  FTFGNNEWGQLGIGSNKTRNKPTTVKALKPE-KITHVAAGRFHTLAVTDSNKLYSFGQGS 115

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              LGHG++ D   P +I++   K +++  ++ G  H  A+  +G +
Sbjct: 116 EGALGHGDETDLNMPTSIESLEDKDVNI--IACGGYHSAAITKNGEL 160



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 70/142 (49%), Gaps = 5/142 (3%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + +  G YHT +++ +  +++ G +  G LG G      V+  ++    +  VV+V+   
Sbjct: 191 ISVACGYYHTAVVTADGKLYTFGETEGGKLGLGDIEAHKVTKPKVVKGISGKVVKVACGG 250

Query: 173 NHAAFVLQSGQVFT--CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
           NH   +  SGQV+T   G N     G +  +  I  P+LVEAL     K +  G + T  
Sbjct: 251 NHTVALTASGQVYTFGSGQNGQLGLGSKIMDSNI--PKLVEALSKRKIKHIACGESHTAV 308

Query: 231 LTIRGHVHTCGSNTHGQLGHGD 252
           ++ +G + T G   HG+LG GD
Sbjct: 309 VSDKGELFTFGDGRHGKLGQGD 330


>gi|297807279|ref|XP_002871523.1| ran GTPase binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297317360|gb|EFH47782.1| ran GTPase binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1075

 Score = 84.3 bits (207), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 56/175 (32%), Positives = 88/175 (50%), Gaps = 5/175 (2%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHR-DTNRPIFRPRLVEALKGVPCKQVTA 223
           V  ++    HA  V + G+ F+ G+ S    GH  D+N  I +P+L++AL     + V  
Sbjct: 310 VQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSN--IQQPKLIDALNTTNIELVAC 367

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G   +  +T+ G ++T G    G LGHG+ +    PK +  L E   V  IA GP +   
Sbjct: 368 GEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNFLLEGIHVSSIACGPYHTAV 427

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           VT  G +++FG G+   LGHG++     PR + +   KG+  VR + G  H  A+
Sbjct: 428 VTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSL--KGLRTVRAACGVWHTAAV 480



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 72/239 (30%), Positives = 112/239 (46%), Gaps = 19/239 (7%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSASEN 173
           +  G +H+  ++ S  +++ G    GVLGHG E +  V   R+NF     HV  ++    
Sbjct: 365 VACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVP-KRVNFLLEGIHVSSIACGPY 423

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT- 232
           H A V  +GQ+FT GD +    GH D  + +F PR V++LKG+   +   G+  T  +  
Sbjct: 424 HTAVVTSAGQLFTFGDGTFGVLGHGD-KKSVFIPREVDSLKGLRTVRAACGVWHTAAVVE 482

Query: 233 -----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
                        G + T G    G+LGHG+   +  P  +A L E  +  Q+A G S  
Sbjct: 483 VMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEP-NFCQVACGHSLT 541

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           +A+T +G VY+ GS     LG+     +L P  ++    K   V  ++ G  HV  L S
Sbjct: 542 VALTTSGHVYTMGSPVYGQLGNSHADGKL-PNRVEGKLHKSF-VEEIACGAYHVAVLTS 598



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 66/224 (29%), Positives = 102/224 (45%), Gaps = 16/224 (7%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G YHT +++++  +F+ G    GVLGHG + +  +    ++       V+ +    H
Sbjct: 418 IACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIP-REVDSLKGLRTVRAACGVWH 476

Query: 175 AAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            A V++            SG++FT GD      GH     P   P  V AL      QV 
Sbjct: 477 TAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGH-GNKEPKLVPTCVAALVEPNFCQVA 535

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
            G + T  LT  GHV+T GS  +GQLG+    D   P  +        V +IA G  ++ 
Sbjct: 536 CGHSLTVALTTSGHVYTMGSPVYGQLGNSHA-DGKLPNRVEGKLHKSFVEEIACGAYHVA 594

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
            +T    VY++G GSN  LGHG+  D   P  +++ + K +  +
Sbjct: 595 VLTSRTEVYTWGKGSNGRLGHGDVDDRNSPTLVESLKDKQVKSI 638



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 67/138 (48%), Gaps = 2/138 (1%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E+   +  + +  G      +T +G   + G  + G+LGHG   +   PK I  L 
Sbjct: 299 PKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQPKLIDALN 358

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
              ++  +A G  +  AVT +G +Y++G G    LGHG +     P+ +  F  +GIHV 
Sbjct: 359 TT-NIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRV-NFLLEGIHVS 416

Query: 327 RVSAGDEHVVALDSSGYV 344
            ++ G  H   + S+G +
Sbjct: 417 SIACGPYHTAVVTSAGQL 434


>gi|297791865|ref|XP_002863817.1| hypothetical protein ARALYDRAFT_917597 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297309652|gb|EFH40076.1| hypothetical protein ARALYDRAFT_917597 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1083

 Score = 84.3 bits (207), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 54/168 (32%), Positives = 87/168 (51%), Gaps = 7/168 (4%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           HAA V + G+VFT G+ S    GH    + +  P+L+E+L       V  G   T  +T+
Sbjct: 288 HAALVSRQGEVFTWGEASGGRLGH-GMGKDVTGPQLIESLAATSVDFVACGEFHTCAVTM 346

Query: 234 RGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            G ++T G  TH  G LGHG  +    PK I+ PLE +  +  ++ GP +   +T  G +
Sbjct: 347 TGEIYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGL-QIASVSCGPWHTALITSTGQL 405

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           ++FG G+   LGHG++     PR +++    G+  + V+ G  H  A+
Sbjct: 406 FTFGDGTFGVLGHGDKETVFYPREVESL--SGLRTIAVACGVWHAAAI 451



 Score = 84.3 bits (207), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 73/243 (30%), Positives = 113/243 (46%), Gaps = 19/243 (7%)

Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           ++ G +HT LI S   +F+ G    GVLGHG + T  V + R +   S    + V+    
Sbjct: 389 VSCGPWHTALITSTGQLFTFGDGTFGVLGHGDKET--VFYPREVESLSGLRTIAVACGVW 446

Query: 174 HAAFVLQ-----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           HAA +++           SG++FT GD      GH D    + +P  V AL      +V 
Sbjct: 447 HAAAIVEVIVTQSTSSISSGKLFTWGDGDKSRLGHGDKESRL-KPTCVSALIDHTFHRVA 505

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
            G + T  LT  G V+T GS  +GQLG+ +  D   P  +        V +IA G  ++ 
Sbjct: 506 CGHSLTVGLTTSGKVYTMGSTVYGQLGNPNA-DGKLPCLVEDKLIKDCVEEIACGAYHVA 564

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            +T    V+++G G+N  LGHG+  D   P  + T + +  HV  ++ G     A+    
Sbjct: 565 VLTSRNEVFTWGKGANGRLGHGDIEDRKAPSLVDTLKER--HVKNIACGSNFTAAICLHK 622

Query: 343 YVS 345
           +VS
Sbjct: 623 WVS 625



 Score = 72.4 bits (176), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 66/250 (26%), Positives = 107/250 (42%), Gaps = 32/250 (12%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQ 167
           I  G  H  L+S    VF+ G +  G LGHG       P+  + ++ T ++F        
Sbjct: 282 IACGVRHAALVSRQGEVFTWGEASGGRLGHGMGKDVTGPQLIESLAATSVDF-------- 333

Query: 168 VSASENHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
           V+  E H   V  +G+++T GD +  +   GH          R+   L+G+    V+ G 
Sbjct: 334 VACGEFHTCAVTMTGEIYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQIASVSCGP 393

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
             T  +T  G + T G  T G LGHGD      P+ +  L  + ++  +A G  +  A+ 
Sbjct: 394 WHTALITSTGQLFTFGDGTFGVLGHGDKETVFYPREVESLSGLRTIA-VACGVWHAAAIV 452

Query: 286 -----------GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 334
                       +G ++++G G    LGHG++   L+P  +        H  RV+ G   
Sbjct: 453 EVIVTQSTSSISSGKLFTWGDGDKSRLGHGDKESRLKPTCVSALIDHTFH--RVACGHSL 510

Query: 335 VVALDSSGYV 344
            V L +SG V
Sbjct: 511 TVGLTTSGKV 520



 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 74/158 (46%), Gaps = 7/158 (4%)

Query: 189 DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 248
           + ++ C G R     +  P+ +E+   +    +  G+     ++ +G V T G  + G+L
Sbjct: 253 EKNATCVGSRSD---VLIPKPLESNVVLDVHHIACGVRHAALVSRQGEVFTWGEASGGRL 309

Query: 249 GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQ 306
           GHG   D   P+ I  L    SV  +A G  +  AVT  G +Y++G G++    LGHG  
Sbjct: 310 GHGMGKDVTGPQLIESLAAT-SVDFVACGEFHTCAVTMTGEIYTWGDGTHNAGLLGHGTD 368

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
                P+ I +   +G+ +  VS G  H   + S+G +
Sbjct: 369 VSHWIPKRI-SGPLEGLQIASVSCGPWHTALITSTGQL 405


>gi|195030320|ref|XP_001988016.1| GH10796 [Drosophila grimshawi]
 gi|193904016|gb|EDW02883.1| GH10796 [Drosophila grimshawi]
          Length = 491

 Score = 84.3 bits (207), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 62/226 (27%), Positives = 102/226 (45%), Gaps = 27/226 (11%)

Query: 122 HTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           HT+LI+ +      G +  G LG   +       + I      ++VQ +A  +H  F+  
Sbjct: 131 HTILINMDRKALGFGRNPSGQLGLSSDIKLVEKPSLIPALEQLNIVQAAAGRHHTLFLTD 190

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           +G V+ CG+N S  CG  + +  +F P  +   +G P  ++  G  F+  L I+G++HT 
Sbjct: 191 TGTVYACGENKSGQCGVGNAHPNVFAPTPIN-YRGPPIIRIGCGAEFSVILDIKGNLHTF 249

Query: 241 GSNTHGQLGHGDTLD------------RPTPKSI------------APLEEVGSVVQIAA 276
           G   +GQLGH                   +PK +             P++ V  +V  A 
Sbjct: 250 GLPEYGQLGHNTDAKYFVNANKLSFHFETSPKKVVLYIEKSKEGHVTPVDGV-QIVDFAC 308

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           G ++ +A+     VYS+G G    LGH E  DE+ PR ++ F  +G
Sbjct: 309 GNNHTVAIDSKKRVYSWGFGGFGRLGHAEPKDEMVPRLMKFFDTQG 354



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 85/208 (40%), Gaps = 35/208 (16%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 219
           P++AH + ++       F          G N S   G     + + +P L+ AL+ +   
Sbjct: 127 PASAHTILINMDRKALGF----------GRNPSGQLGLSSDIKLVEKPSLIPALEQLNIV 176

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGP 278
           Q  AG + T FLT  G V+ CG N  GQ G G+    P   +  P+   G  +++I  G 
Sbjct: 177 QAAAGRHHTLFLTDTGTVYACGENKSGQCGVGNA--HPNVFAPTPINYRGPPIIRIGCGA 234

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQ------------HDELQPRAIQTFRRK----- 321
            + + +   G +++FG      LGH               H E  P+ +  +  K     
Sbjct: 235 EFSVILDIKGNLHTFGLPEYGQLGHNTDAKYFVNANKLSFHFETSPKKVVLYIEKSKEGH 294

Query: 322 -----GIHVVRVSAGDEHVVALDSSGYV 344
                G+ +V  + G+ H VA+DS   V
Sbjct: 295 VTPVDGVQIVDFACGNNHTVAIDSKKRV 322


>gi|410910330|ref|XP_003968643.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Takifugu
           rubripes]
          Length = 527

 Score = 84.3 bits (207), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 102/218 (46%), Gaps = 4/218 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  VF+ G++  G LG G +    +   RI+      +V +S  +  H A     G+VF+
Sbjct: 40  NDEVFALGTNCSGCLGLG-DLQSTIEPRRIDVLCGKKIVSLSYGTGPHVAIATADGEVFS 98

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N     G+  +   +    +   L G    +V  G + T  LT  G V   G N  G
Sbjct: 99  WGHNGYSQLGNGTSTHGLTPALVSTNLLGKRVIEVACGSHHTIALTTDGEVFAWGYNNSG 158

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T ++PTP+ ++   +   VV IA G    +AV  +G +Y +G   N  LG G  
Sbjct: 159 QVGSGSTANQPTPRRVSSCLQNKVVVNIACGQLCSMAVLDSGEIYGWGYNCNGQLGLGNN 218

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            ++  P  I     +G++V++V+ G  H +AL   G+V
Sbjct: 219 GNQQTPCRIAAL--QGVNVIQVACGYAHTIALTDEGFV 254



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 59/205 (28%), Positives = 99/205 (48%), Gaps = 3/205 (1%)

Query: 118 TGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 177
           TG +  +  ++  VFS G +    LG+G  T                V++V+   +H   
Sbjct: 83  TGPHVAIATADGEVFSWGHNGYSQLGNGTSTHGLTPALVSTNLLGKRVIEVACGSHHTIA 142

Query: 178 VLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
           +   G+VF  G N+S   G   T N+P  R R+   L+      +  G   +  +   G 
Sbjct: 143 LTTDGEVFAWGYNNSGQVGSGSTANQPTPR-RVSSCLQNKVVVNIACGQLCSMAVLDSGE 201

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           ++  G N +GQLG G+  ++ TP  IA L+ V +V+Q+A G ++ +A+T  G VYS+G+ 
Sbjct: 202 IYGWGYNCNGQLGLGNNGNQQTPCRIAALQGV-NVIQVACGYAHTIALTDEGFVYSWGAN 260

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRK 321
           S   LG G + ++  P  I T + +
Sbjct: 261 SYGQLGTGNKCNQAVPTLINTEKER 285



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/184 (28%), Positives = 83/184 (45%), Gaps = 6/184 (3%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G +HT+ L ++  VF+ G +  G +G G    Q       +      VV ++  +
Sbjct: 131 IEVACGSHHTIALTTDGEVFAWGYNNSGQVGSGSTANQPTPRRVSSCLQNKVVVNIACGQ 190

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRD--TNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
             +  VL SG+++  G N   C G      N     P  + AL+GV   QV  G   T  
Sbjct: 191 LCSMAVLDSGEIYGWGYN---CNGQLGLGNNGNQQTPCRIAALQGVNVIQVACGYAHTIA 247

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           LT  G V++ G+N++GQLG G+  ++  P  I   +E  S V          A T +G V
Sbjct: 248 LTDEGFVYSWGANSYGQLGTGNKCNQAVPTLINTEKERMSEVAACHTSHTSAAKTQSGQV 307

Query: 291 YSFG 294
             +G
Sbjct: 308 LMWG 311


>gi|297812127|ref|XP_002873947.1| hypothetical protein ARALYDRAFT_488831 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297319784|gb|EFH50206.1| hypothetical protein ARALYDRAFT_488831 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1100

 Score = 84.3 bits (207), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 75/257 (29%), Positives = 118/257 (45%), Gaps = 20/257 (7%)

Query: 99  SVEHSSDIVETSAGNMQITT-GRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR 156
           +V+H   I   S  N+++   G YH+  ++ S  +++ G    G+LGHG E +  V   R
Sbjct: 346 NVQHPKLIDALSTTNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVP-KR 404

Query: 157 INF-PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           +NF     HV  ++    H A V  +GQ+FT GD +    GH D  + +F PR V++LKG
Sbjct: 405 VNFLMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGD-RKSVFIPREVDSLKG 463

Query: 216 VPCKQVTAGLNFTGFLT------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +   +   G+  T  +               G + T G     +LGHGD   +  P  +A
Sbjct: 464 LRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVPTCVA 523

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 323
            L E  +  Q+A G S  +A+T +G VY+ GS     LG+     ++  R      +   
Sbjct: 524 ALVEP-NFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNPHADGKVPTRVEGKLHKS-- 580

Query: 324 HVVRVSAGDEHVVALDS 340
            V  ++ G  HV  L S
Sbjct: 581 FVEEIACGAYHVAVLTS 597



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/166 (32%), Positives = 84/166 (50%), Gaps = 5/166 (3%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHR-DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           HA  V + G+ F+ G+ S    GH  D+N  +  P+L++AL     + V  G   +  +T
Sbjct: 318 HAVLVTKQGESFSWGEESEGRLGHGVDSN--VQHPKLIDALSTTNIELVACGEYHSCAVT 375

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
           + G ++T G    G LGHG+ +    PK +  L E   V  IA GP +   VT  G +++
Sbjct: 376 LSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVTSAGQLFT 435

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           FG G+   LGHG++     PR + +   KG+  VR + G  H  A+
Sbjct: 436 FGDGTFGVLGHGDRKSVFIPREVDSL--KGLRTVRAACGVWHTAAV 479



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/224 (29%), Positives = 102/224 (45%), Gaps = 16/224 (7%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G YHT +++++  +F+ G    GVLGHG   +  +    ++       V+ +    H
Sbjct: 417 IACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVFIP-REVDSLKGLRTVRAACGVWH 475

Query: 175 AAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            A V++            SG++FT GD      GH D   P   P  V AL      QV 
Sbjct: 476 TAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGD-KEPKLVPTCVAALVEPNFCQVA 534

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
            G + T  LT  GHV+T GS  +GQLG+    D   P  +        V +IA G  ++ 
Sbjct: 535 CGHSLTVALTTSGHVYTMGSPVYGQLGNPHA-DGKVPTRVEGKLHKSFVEEIACGAYHVA 593

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
            +T    VY++G GSN  LGHG+  D   P  +++ + K +  +
Sbjct: 594 VLTSRTEVYTWGKGSNGRLGHGDADDRNSPTLVESLKDKQVKSI 637



 Score = 55.1 bits (131), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 66/136 (48%), Gaps = 2/136 (1%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E+   +  + +  G      +T +G   + G  + G+LGHG   +   PK I  L 
Sbjct: 298 PKALESTIVLDVQYIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLIDALS 357

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
              ++  +A G  +  AVT +G +Y++G G    LGHG +     P+ +  F  +GIHV 
Sbjct: 358 TT-NIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVN-FLMEGIHVS 415

Query: 327 RVSAGDEHVVALDSSG 342
            ++ G  H   + S+G
Sbjct: 416 SIACGPYHTAVVTSAG 431


>gi|125986855|ref|XP_001357190.1| GA21568 [Drosophila pseudoobscura pseudoobscura]
 gi|195146500|ref|XP_002014222.1| GL19056 [Drosophila persimilis]
 gi|54645520|gb|EAL34258.1| GA21568 [Drosophila pseudoobscura pseudoobscura]
 gi|194106175|gb|EDW28218.1| GL19056 [Drosophila persimilis]
          Length = 486

 Score = 84.3 bits (207), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 62/226 (27%), Positives = 101/226 (44%), Gaps = 27/226 (11%)

Query: 122 HTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           HT+LI+ +      G +  G LG  P+       T I      ++VQ S   +H  F+  
Sbjct: 126 HTILINMDRKALGFGRNPSGQLGFSPDVKLVEKPTIIPALEQLNIVQASVGRHHTLFLTD 185

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           +G V+  G+N S  CG  + +  I+ P  +   +G P  ++  G  F+  L I+G++HT 
Sbjct: 186 TGTVYALGENKSGQCGVGNAHANIYSPTPIN-YRGPPIIRIGCGAEFSVILDIKGNLHTF 244

Query: 241 GSNTHGQLGHGDTLD------------RPTPKS------------IAPLEEVGSVVQIAA 276
           G   +GQLGH                   +PK             + P++ V  +V  A 
Sbjct: 245 GLPEYGQLGHNTDAKYFVNANKLSFHFETSPKKVVLYIEKSKEGHVTPVDGV-QIVDFAC 303

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           G ++ +A+     VYS+G G    LGH E  DE+ PR ++ +  +G
Sbjct: 304 GNNHTVAIDSKKRVYSWGFGGFGRLGHAEPKDEMVPRLMKFYDTQG 349



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 52/211 (24%), Positives = 85/211 (40%), Gaps = 41/211 (19%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 219
           PSAAH + ++       F          G N S   G     + + +P ++ AL+ +   
Sbjct: 122 PSAAHTILINMDRKALGF----------GRNPSGQLGFSPDVKLVEKPTIIPALEQLNIV 171

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD---TLDRPTPKSI-APLEEVGSVVQIA 275
           Q + G + T FLT  G V+  G N  GQ G G+    +  PTP +   P      +++I 
Sbjct: 172 QASVGRHHTLFLTDTGTVYALGENKSGQCGVGNAHANIYSPTPINYRGP-----PIIRIG 226

Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ------------HDELQPRAIQTFRRK-- 321
            G  + + +   G +++FG      LGH               H E  P+ +  +  K  
Sbjct: 227 CGAEFSVILDIKGNLHTFGLPEYGQLGHNTDAKYFVNANKLSFHFETSPKKVVLYIEKSK 286

Query: 322 --------GIHVVRVSAGDEHVVALDSSGYV 344
                   G+ +V  + G+ H VA+DS   V
Sbjct: 287 EGHVTPVDGVQIVDFACGNNHTVAIDSKKRV 317


>gi|431917308|gb|ELK16841.1| Putative E3 ubiquitin-protein ligase HERC2 [Pteropus alecto]
          Length = 883

 Score = 84.3 bits (207), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 67/237 (28%), Positives = 107/237 (45%), Gaps = 17/237 (7%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA-------AHVVQVS 169
           + G ++  L +   V+S G    G LGHG      V        SA         VV ++
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKLISAFCGKQAGQRVVHIA 558

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G     
Sbjct: 559 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQ 617

Query: 230 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
            L +   G V + G   +G+LG G +    TPK +  L+++  VV++  G  + +A+T +
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDL-DVVKVRCGSQFSVALTKD 676

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V
Sbjct: 677 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEV 731



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 92/187 (49%), Gaps = 20/187 (10%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++ +E     + +SG+V+T   +S               P+LV+ L      ++ A 
Sbjct: 454 VSQIACAEKRFLILSRSGRVYTQAYSSD-----------ALAPQLVQGLVSRNIVKIAAH 502

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKLISAFCGKQAGQRVVHIACGST 562

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 620

Query: 338 LDSSGYV 344
           +  +G V
Sbjct: 621 VTENGQV 627



 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 59/223 (26%), Positives = 100/223 (44%), Gaps = 9/223 (4%)

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA--FV 178
           Y   + +   +++ G    G LGHG    + +            V+ V+     A    V
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAV 621

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
            ++GQV++ GD      G R  +     P+LVE L+ +   +V  G  F+  LT  G V+
Sbjct: 622 TENGQVWSWGDGDYGKLG-RGGSDGCKTPKLVEKLQDLDVVKVRCGSQFSVALTKDGQVY 680

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           + G   + +LGHG       PK +  L+    V+ +AAG ++ LA+T +  V+S+GS ++
Sbjct: 681 SWGKGDNQRLGHGTEEHVRYPKLLEGLQG-KKVIDVAAGSTHCLALTEDSEVHSWGS-ND 738

Query: 299 FCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            C      H  + +P A+     K  H+V ++ G     A  S
Sbjct: 739 QCQHFDTLHATKPEPAALPGLDTK--HIVGIACGPAQSFAWSS 779



 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   +       VV+V      + 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLVEKLQDLDVVKVRCGSQFSV 671

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++ P  +   +V IA GP+   A
Sbjct: 731 VHSWGSNDQCQ--HFDTLHATKPEPAAL-PGLDTKHIVGIACGPAQSFA 776


>gi|356526924|ref|XP_003532065.1| PREDICTED: uncharacterized protein LOC100797527 [Glycine max]
          Length = 1099

 Score = 84.3 bits (207), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 59/178 (33%), Positives = 94/178 (52%), Gaps = 9/178 (5%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHR-DTNRPIFRPRLVEALKGVPCKQVTA 223
           V  ++    HAA V + G+VF+ G  S    GH  D++ P   P+L+E+L     + V  
Sbjct: 307 VQNIACGGEHAAMVTKQGEVFSWGGESGGRLGHGVDSDVP--HPKLIESLSNTNIELVAC 364

Query: 224 GLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSY 280
           G   T  +T+ G ++T G  T+  G LGHG+ +    PK +  PLE +  V  I+ GP +
Sbjct: 365 GEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWVPKRVNGPLEGI-HVSSISCGPWH 423

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
              VT +G +++FG G+   LGHG++     PR I++   KG+  V+ + G  H  A+
Sbjct: 424 TAVVTSSGQLFTFGDGTFGVLGHGDRKSVSLPREIESL--KGLRTVQAACGVWHTAAV 479



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 76/295 (25%), Positives = 118/295 (40%), Gaps = 70/295 (23%)

Query: 100 VEHSSDIVETSAGNMQITT-GRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFT 155
           V H   I   S  N+++   G YHT  ++ S     +  G+   G+LGHG + +  V   
Sbjct: 345 VPHPKLIESLSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWVP-K 403

Query: 156 RINFP-SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK 214
           R+N P    HV  +S    H A V  SGQ+FT GD +    GH D  + +  PR +E+LK
Sbjct: 404 RVNGPLEGIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGVLGHGD-RKSVSLPREIESLK 462

Query: 215 GVPCKQVTAGLNFTGFLT------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           G+   Q   G+  T  +               G + T G    G+LGHGD   +  P  +
Sbjct: 463 GLRTVQAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKESKLVPTRV 522

Query: 263 APLEE------------------------VGSVV-------------------------- 272
             L+E                        +GS V                          
Sbjct: 523 VTLDEPNFCQVACGHSMTVALSRLGHVYTMGSCVYGHLGNTQADGKLPTPVEGKLSKSFV 582

Query: 273 -QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
            +IA G  ++  +T    V+++G G+N CLGHG+ +D   P  ++  + K +  +
Sbjct: 583 EEIACGAYHVAVLTSRTEVFTWGKGANGCLGHGDTNDRNTPTLVEALKDKQVKSI 637



 Score = 67.8 bits (164), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 67/247 (27%), Positives = 102/247 (41%), Gaps = 32/247 (12%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSAS 171
           G +  ++     VFS G    G LGHG       P+  + +S T I          V+  
Sbjct: 314 GEHAAMVTKQGEVFSWGGESGGRLGHGVDSDVPHPKLIESLSNTNIEL--------VACG 365

Query: 172 ENHAAFVLQSGQVFTCGDNSSF--CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
           E H   V  SG ++T GD +      GH +        R+   L+G+    ++ G   T 
Sbjct: 366 EYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWVPKRVNGPLEGIHVSSISCGPWHTA 425

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT---- 285
            +T  G + T G  T G LGHGD      P+ I  L+ +   VQ A G  +  AV     
Sbjct: 426 VVTSSGQLFTFGDGTFGVLGHGDRKSVSLPREIESLKGL-RTVQAACGVWHTAAVVEVMV 484

Query: 286 --------GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
                    +G ++++G G    LGHG++  +L P  + T      +  +V+ G    VA
Sbjct: 485 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKESKLVPTRVVTLDEP--NFCQVACGHSMTVA 542

Query: 338 LDSSGYV 344
           L   G+V
Sbjct: 543 LSRLGHV 549



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 71/140 (50%), Gaps = 4/140 (2%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E+   +  + +  G      +T +G V + G  + G+LGHG   D P PK I  L 
Sbjct: 296 PKALESAVVLDVQNIACGGEHAAMVTKQGEVFSWGGESGGRLGHGVDSDVPHPKLIESLS 355

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPRAIQTFRRKGIH 324
              ++  +A G  +  AVT +G +Y++G G+ N+  LGHG Q     P+ +     +GIH
Sbjct: 356 NT-NIELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWVPKRVNG-PLEGIH 413

Query: 325 VVRVSAGDEHVVALDSSGYV 344
           V  +S G  H   + SSG +
Sbjct: 414 VSSISCGPWHTAVVTSSGQL 433


>gi|145357939|ref|NP_568268.3| Regulator of chromosome condensation-like protein with FYVE zinc
           finger domain-containing protein [Arabidopsis thaliana]
 gi|332004415|gb|AED91798.1| Regulator of chromosome condensation-like protein with FYVE zinc
           finger domain-containing protein [Arabidopsis thaliana]
          Length = 1075

 Score = 84.3 bits (207), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 56/175 (32%), Positives = 88/175 (50%), Gaps = 5/175 (2%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHR-DTNRPIFRPRLVEALKGVPCKQVTA 223
           V  ++    HA  V + G+ F+ G+ S    GH  D+N  I +P+L++AL     + V  
Sbjct: 310 VQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSN--IQQPKLIDALNTTNIELVAC 367

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G   +  +T+ G ++T G    G LGHG+ +    PK +  L E   V  IA GP +   
Sbjct: 368 GEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNFLLEGIHVSSIACGPYHTAV 427

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           VT  G +++FG G+   LGHG++     PR + +   KG+  VR + G  H  A+
Sbjct: 428 VTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSL--KGLRTVRAACGVWHTAAV 480



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/224 (29%), Positives = 103/224 (45%), Gaps = 16/224 (7%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G YHT +++++  +F+ G    GVLGHG + +  +    ++       V+ +    H
Sbjct: 418 IACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIP-REVDSLKGLRTVRAACGVWH 476

Query: 175 AAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            A V++            SG++FT GD      GH     P   P  V AL      QV 
Sbjct: 477 TAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGH-GNKEPKLVPTCVAALVEPNFCQVA 535

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
            G + T  LT  GHV+T GS  +GQLG+    D  TP  +        V +IA G  ++ 
Sbjct: 536 CGHSLTVALTTSGHVYTMGSPVYGQLGNSHA-DGKTPNRVEGKLHKSFVEEIACGAYHVA 594

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
            +T    VY++G GSN  LGHG+  D   P  +++ + K +  +
Sbjct: 595 VLTSRTEVYTWGKGSNGRLGHGDVDDRNSPTLVESLKDKQVKSI 638



 Score = 81.3 bits (199), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 72/239 (30%), Positives = 111/239 (46%), Gaps = 19/239 (7%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSASEN 173
           +  G +H+  ++ S  +++ G    GVLGHG E +  V   R+NF     HV  ++    
Sbjct: 365 VACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVP-KRVNFLLEGIHVSSIACGPY 423

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT- 232
           H A V  +GQ+FT GD +    GH D  + +F PR V++LKG+   +   G+  T  +  
Sbjct: 424 HTAVVTSAGQLFTFGDGTFGVLGHGD-KKSVFIPREVDSLKGLRTVRAACGVWHTAAVVE 482

Query: 233 -----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
                        G + T G    G+LGHG+   +  P  +A L E  +  Q+A G S  
Sbjct: 483 VMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEP-NFCQVACGHSLT 541

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           +A+T +G VY+ GS     LG+    D   P  ++    K   V  ++ G  HV  L S
Sbjct: 542 VALTTSGHVYTMGSPVYGQLGN-SHADGKTPNRVEGKLHKSF-VEEIACGAYHVAVLTS 598



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 67/138 (48%), Gaps = 2/138 (1%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E+   +  + +  G      +T +G   + G  + G+LGHG   +   PK I  L 
Sbjct: 299 PKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQPKLIDALN 358

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
              ++  +A G  +  AVT +G +Y++G G    LGHG +     P+ +  F  +GIHV 
Sbjct: 359 TT-NIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRV-NFLLEGIHVS 416

Query: 327 RVSAGDEHVVALDSSGYV 344
            ++ G  H   + S+G +
Sbjct: 417 SIACGPYHTAVVTSAGQL 434


>gi|14586365|emb|CAC42896.1| putative protein [Arabidopsis thaliana]
          Length = 1062

 Score = 84.3 bits (207), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 56/175 (32%), Positives = 88/175 (50%), Gaps = 5/175 (2%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHR-DTNRPIFRPRLVEALKGVPCKQVTA 223
           V  ++    HA  V + G+ F+ G+ S    GH  D+N  I +P+L++AL     + V  
Sbjct: 297 VQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSN--IQQPKLIDALNTTNIELVAC 354

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G   +  +T+ G ++T G    G LGHG+ +    PK +  L E   V  IA GP +   
Sbjct: 355 GEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNFLLEGIHVSSIACGPYHTAV 414

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           VT  G +++FG G+   LGHG++     PR + +   KG+  VR + G  H  A+
Sbjct: 415 VTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSL--KGLRTVRAACGVWHTAAV 467



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/224 (29%), Positives = 104/224 (46%), Gaps = 16/224 (7%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G YHT +++++  +F+ G    GVLGHG + +  +    ++       V+ +    H
Sbjct: 405 IACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIP-REVDSLKGLRTVRAACGVWH 463

Query: 175 AAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            A V++            SG++FT GD      GH +   P   P  V AL      QV 
Sbjct: 464 TAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGN-KEPKLVPTCVAALVEPNFCQVA 522

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
            G + T  LT  GHV+T GS  +GQLG+    D  TP  +        V +IA G  ++ 
Sbjct: 523 CGHSLTVALTTSGHVYTMGSPVYGQLGNSHA-DGKTPNRVEGKLHKSFVEEIACGAYHVA 581

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
            +T    VY++G GSN  LGHG+  D   P  +++ + K +  +
Sbjct: 582 VLTSRTEVYTWGKGSNGRLGHGDVDDRNSPTLVESLKDKQVKSI 625



 Score = 81.3 bits (199), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 72/239 (30%), Positives = 111/239 (46%), Gaps = 19/239 (7%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSASEN 173
           +  G +H+  ++ S  +++ G    GVLGHG E +  V   R+NF     HV  ++    
Sbjct: 352 VACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVP-KRVNFLLEGIHVSSIACGPY 410

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT- 232
           H A V  +GQ+FT GD +    GH D  + +F PR V++LKG+   +   G+  T  +  
Sbjct: 411 HTAVVTSAGQLFTFGDGTFGVLGHGD-KKSVFIPREVDSLKGLRTVRAACGVWHTAAVVE 469

Query: 233 -----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
                        G + T G    G+LGHG+   +  P  +A L E  +  Q+A G S  
Sbjct: 470 VMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEP-NFCQVACGHSLT 528

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           +A+T +G VY+ GS     LG+    D   P  ++    K   V  ++ G  HV  L S
Sbjct: 529 VALTTSGHVYTMGSPVYGQLGNS-HADGKTPNRVEGKLHKSF-VEEIACGAYHVAVLTS 585



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 67/138 (48%), Gaps = 2/138 (1%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E+   +  + +  G      +T +G   + G  + G+LGHG   +   PK I  L 
Sbjct: 286 PKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQPKLIDALN 345

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
              ++  +A G  +  AVT +G +Y++G G    LGHG +     P+ +  F  +GIHV 
Sbjct: 346 TT-NIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRV-NFLLEGIHVS 403

Query: 327 RVSAGDEHVVALDSSGYV 344
            ++ G  H   + S+G +
Sbjct: 404 SIACGPYHTAVVTSAGQL 421


>gi|93003290|tpd|FAA00228.1| TPA: zinc finger protein [Ciona intestinalis]
          Length = 2334

 Score = 84.3 bits (207), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 99/217 (45%), Gaps = 6/217 (2%)

Query: 130 SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 189
            V++CG S  G LG GP T      T++ FP     + V +   HA  +   G V++ GD
Sbjct: 482 KVYACGESTSGRLGLGPVTGSVSRLTQVLFPQPIKKLAVHSGGRHAMALTYDGHVYSWGD 541

Query: 190 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
                 GH  +      PR +E       + ++ G + +  +   G ++T G   +G+LG
Sbjct: 542 GEEGKLGH-GSRADALTPRKIETFPEKCIRDISCGSSHSAAIGSSGTLYTWGHGMYGRLG 600

Query: 250 HGDTLDRPTPKSIAPLEEVGSVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 307
           HG+      PK +  L     VVQ+A G   +  L +T +G+VYS+G G    LG G   
Sbjct: 601 HGNNHTLLKPKPVQALSG-QQVVQVACGSRDAQTLCLTQDGLVYSWGDGDFGKLGRGGSD 659

Query: 308 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
               P+ ++  R  G  VV++  G +  +AL   G V
Sbjct: 660 GCCVPKPVE--RLSGQDVVKIECGAQFSLALSRCGLV 694



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 70/230 (30%), Positives = 106/230 (46%), Gaps = 11/230 (4%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           GR+   L  +  V+S G    G LGHG             FP    +  +S   +H+A +
Sbjct: 524 GRHAMALTYDGHVYSWGDGEEGKLGHGSRADALTPRKIETFPEKC-IRDISCGSSHSAAI 582

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
             SG ++T G       GH + N  + +P+ V+AL G    QV  G     T  LT  G 
Sbjct: 583 GSSGTLYTWGHGMYGRLGHGN-NHTLLKPKPVQALSGQQVVQVACGSRDAQTLCLTQDGL 641

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG--SVVQIAAGPSYMLAVTGNGVVYSFG 294
           V++ G    G+LG G +     PK   P+E +    VV+I  G  + LA++  G+V+++G
Sbjct: 642 VYSWGDGDFGKLGRGGSDGCCVPK---PVERLSGQDVVKIECGAQFSLALSRCGLVWTWG 698

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            G  F LGHG      +P+ ++  R     VV V+ G  H +A+   G V
Sbjct: 699 KGDYFRLGHGSDQHVRRPQVVEGLREH--KVVDVAVGALHCLAVTEGGQV 746



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 71/241 (29%), Positives = 112/241 (46%), Gaps = 16/241 (6%)

Query: 113  NMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSA 170
             + +  G  H L +SN   V+S G  + G LGHG  ++  +   RI        +V+V+ 
Sbjct: 1495 QVSVNAGGKHILALSNEGEVYSWGEGVDGKLGHGNRSS--LDHPRIIESLRGDLIVKVAT 1552

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
              +H+A +  +G ++T G       GH D+   + +P+LV ALK      V  G      
Sbjct: 1553 GGSHSAAINATGGLYTWGKGRYGRLGHEDSEDQL-KPKLVNALKDNLVVDVACGNGDAQT 1611

Query: 231  LTI------RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA 283
            L I         V + G   +G+LG G +     P  I  L  +G  +  +A G  + LA
Sbjct: 1612 LCITEGTGGSSVVWSWGDGDYGKLGRGGSDGCKVPAIIDTL--MGKHITHVACGSQFSLA 1669

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            ++  G VY++G G  + LGHG      +P+ I++ R  G+ VV VS G  H +A   +G 
Sbjct: 1670 LSKAGGVYTWGKGDYYRLGHGSDEHVRRPKLIESLR--GMKVVEVSVGSLHCIAAVDNGD 1727

Query: 344  V 344
            V
Sbjct: 1728 V 1728



 Score = 71.2 bits (173), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 65/223 (29%), Positives = 105/223 (47%), Gaps = 13/223 (5%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS--ASENHAAFVLQSGQVFTC 187
             VF+ G    G LG G   +  +  T I      H+ QVS  A   H   +   G+V++ 
Sbjct: 1459 KVFATGYGAGGRLGIGSNESVAIP-TLIESIQHVHITQVSVNAGGKHILALSNEGEVYSW 1517

Query: 188  GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
            G+      GH + +  +  PR++E+L+G    +V  G + +  +   G ++T G   +G+
Sbjct: 1518 GEGVDGKLGHGNRSS-LDHPRIIESLRGDLIVKVATGGSHSAAINATGGLYTWGKGRYGR 1576

Query: 248  LGHGDTLDRPTPKSIAPLEEVGSVVQIAA--GPSYMLAVT----GNGVVYSFGSGSNFCL 301
            LGH D+ D+  PK +  L++   VV +A   G +  L +T    G+ VV+S+G G    L
Sbjct: 1577 LGHEDSEDQLKPKLVNALKD-NLVVDVACGNGDAQTLCITEGTGGSSVVWSWGDGDYGKL 1635

Query: 302  GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            G G       P  I T    G H+  V+ G +  +AL  +G V
Sbjct: 1636 GRGGSDGCKVPAIIDTLM--GKHITHVACGSQFSLALSKAGGV 1676



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/141 (34%), Positives = 73/141 (51%), Gaps = 12/141 (8%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P   + L+ +   QV  G      +T+ G V+ CG +T G+LG G     P   S++ L 
Sbjct: 453 PVASKDLQRLKVTQVIGGSKSLFAVTMGGKVYACGESTSGRLGLG-----PVTGSVSRLT 507

Query: 267 EV---GSVVQIA--AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 321
           +V     + ++A  +G  + +A+T +G VYS+G G    LGHG + D L PR I+TF  K
Sbjct: 508 QVLFPQPIKKLAVHSGGRHAMALTYDGHVYSWGDGEEGKLGHGSRADALTPRKIETFPEK 567

Query: 322 GIHVVRVSAGDEHVVALDSSG 342
            I    +S G  H  A+ SSG
Sbjct: 568 CIR--DISCGSSHSAAIGSSG 586



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 63/227 (27%), Positives = 103/227 (45%), Gaps = 8/227 (3%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
            I+ G  H+  I +S ++++ G  + G LGHG   T  +    +   S   VVQV+    
Sbjct: 571 DISCGSSHSAAIGSSGTLYTWGHGMYGRLGHGNNHT-LLKPKPVQALSGQQVVQVACGSR 629

Query: 174 HAAFV--LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
            A  +   Q G V++ GD      G R  +     P+ VE L G    ++  G  F+  L
Sbjct: 630 DAQTLCLTQDGLVYSWGDGDFGKLG-RGGSDGCCVPKPVERLSGQDVVKIECGAQFSLAL 688

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           +  G V T G   + +LGHG       P+ +  L E   VV +A G  + LAVT  G V+
Sbjct: 689 SRCGLVWTWGKGDYFRLGHGSDQHVRRPQVVEGLRE-HKVVDVAVGALHCLAVTEGGQVF 747

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           ++G   +   G+G      +P  +Q    +G+ + +++ G  H +A 
Sbjct: 748 AWGDNDHGQQGNGGTTVNRKPMKVQGL--EGVKITKLACGSSHSIAF 792



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 66/249 (26%), Positives = 107/249 (42%), Gaps = 15/249 (6%)

Query: 99   SVEHSSDIVETSAGNM--QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFT 155
            S++H   I+E+  G++  ++ TG  H+  I+ +  +++ G    G LGH     Q +   
Sbjct: 1532 SLDHPR-IIESLRGDLIVKVATGGSHSAAINATGGLYTWGKGRYGRLGHEDSEDQ-LKPK 1589

Query: 156  RINFPSAAHVVQVSASENHAAFVL------QSGQVFTCGDNSSFCCGHRDTNRPIFRPRL 209
             +N      VV V+     A  +        S  V++ GD      G R  +     P +
Sbjct: 1590 LVNALKDNLVVDVACGNGDAQTLCITEGTGGSSVVWSWGDGDYGKLG-RGGSDGCKVPAI 1648

Query: 210  VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 269
            ++ L G     V  G  F+  L+  G V+T G   + +LGHG       PK I  L  + 
Sbjct: 1649 IDTLMGKHITHVACGSQFSLALSKAGGVYTWGKGDYYRLGHGSDEHVRRPKLIESLRGM- 1707

Query: 270  SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
             VV+++ G  + +A   NG VY++G      +G G       PR +     +G H+  VS
Sbjct: 1708 KVVEVSVGSLHCIAAVDNGDVYTWGDNDEGQIGDGTTQATQIPRLVAAL--QGHHISHVS 1765

Query: 330  AGDEHVVAL 338
             G  H VA 
Sbjct: 1766 CGSAHTVAW 1774



 Score = 48.5 bits (114), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 55/113 (48%), Gaps = 7/113 (6%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G +   G N  GQLG   G  +  P P  S+A L+ +    Q+  G   +  VTG G V+
Sbjct: 1406 GSIFGWGHNHRGQLGGPEGAKVKIPIPCPSLAALKPI----QLVGGEQTLFTVTGEGKVF 1461

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            + G G+   LG G       P  I++ +   I  V V+AG +H++AL + G V
Sbjct: 1462 ATGYGAGGRLGIGSNESVAIPTLIESIQHVHITQVSVNAGGKHILALSNEGEV 1514


>gi|198417628|ref|XP_002119426.1| PREDICTED: hect domain and RLD 2 [Ciona intestinalis]
          Length = 2335

 Score = 84.3 bits (207), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 99/217 (45%), Gaps = 6/217 (2%)

Query: 130 SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 189
            V++CG S  G LG GP T      T++ FP     + V +   HA  +   G V++ GD
Sbjct: 483 KVYACGESTSGRLGLGPVTGSVSRLTQVLFPQPIKKLAVHSGGRHAMALTYDGHVYSWGD 542

Query: 190 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
                 GH  +      PR +E       + ++ G + +  +   G ++T G   +G+LG
Sbjct: 543 GEEGKLGH-GSRADALTPRKIETFPEKCIRDISCGSSHSAAIGSSGTLYTWGHGMYGRLG 601

Query: 250 HGDTLDRPTPKSIAPLEEVGSVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 307
           HG+      PK +  L     VVQ+A G   +  L +T +G+VYS+G G    LG G   
Sbjct: 602 HGNNHTLLKPKPVQALSG-QQVVQVACGSRDAQTLCLTQDGLVYSWGDGDFGKLGRGGSD 660

Query: 308 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
               P+ ++  R  G  VV++  G +  +AL   G V
Sbjct: 661 GCCVPKPVE--RLSGQDVVKIECGAQFSLALSRCGLV 695



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 70/230 (30%), Positives = 106/230 (46%), Gaps = 11/230 (4%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           GR+   L  +  V+S G    G LGHG             FP    +  +S   +H+A +
Sbjct: 525 GRHAMALTYDGHVYSWGDGEEGKLGHGSRADALTPRKIETFPEKC-IRDISCGSSHSAAI 583

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
             SG ++T G       GH + N  + +P+ V+AL G    QV  G     T  LT  G 
Sbjct: 584 GSSGTLYTWGHGMYGRLGHGN-NHTLLKPKPVQALSGQQVVQVACGSRDAQTLCLTQDGL 642

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG--SVVQIAAGPSYMLAVTGNGVVYSFG 294
           V++ G    G+LG G +     PK   P+E +    VV+I  G  + LA++  G+V+++G
Sbjct: 643 VYSWGDGDFGKLGRGGSDGCCVPK---PVERLSGQDVVKIECGAQFSLALSRCGLVWTWG 699

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            G  F LGHG      +P+ ++  R     VV V+ G  H +A+   G V
Sbjct: 700 KGDYFRLGHGSDQHVRRPQVVEGLREH--KVVDVAVGALHCLAVTEGGQV 747



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 71/241 (29%), Positives = 112/241 (46%), Gaps = 16/241 (6%)

Query: 113  NMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSA 170
             + +  G  H L +SN   V+S G  + G LGHG  ++  +   RI        +V+V+ 
Sbjct: 1496 QVSVNAGGKHILALSNEGEVYSWGEGVDGKLGHGNRSS--LDHPRIIESLRGDLIVKVAT 1553

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
              +H+A +  +G ++T G       GH D+   + +P+LV ALK      V  G      
Sbjct: 1554 GGSHSAAINATGGLYTWGKGRYGRLGHEDSEDQL-KPKLVNALKDNLVVDVACGNGDAQT 1612

Query: 231  LTI------RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA 283
            L I         V + G   +G+LG G +     P  I  L  +G  +  +A G  + LA
Sbjct: 1613 LCITEGTGGSSVVWSWGDGDYGKLGRGGSDGCKVPAIIDTL--MGKHITHVACGSQFSLA 1670

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            ++  G VY++G G  + LGHG      +P+ I++ R  G+ VV VS G  H +A   +G 
Sbjct: 1671 LSKAGGVYTWGKGDYYRLGHGSDEHVRRPKLIESLR--GMKVVEVSVGSLHCIAAVDNGD 1728

Query: 344  V 344
            V
Sbjct: 1729 V 1729



 Score = 71.2 bits (173), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 65/223 (29%), Positives = 105/223 (47%), Gaps = 13/223 (5%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS--ASENHAAFVLQSGQVFTC 187
             VF+ G    G LG G   +  +  T I      H+ QVS  A   H   +   G+V++ 
Sbjct: 1460 KVFATGYGAGGRLGIGSNESVAIP-TLIESIQHVHITQVSVNAGGKHILALSNEGEVYSW 1518

Query: 188  GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
            G+      GH + +  +  PR++E+L+G    +V  G + +  +   G ++T G   +G+
Sbjct: 1519 GEGVDGKLGHGNRSS-LDHPRIIESLRGDLIVKVATGGSHSAAINATGGLYTWGKGRYGR 1577

Query: 248  LGHGDTLDRPTPKSIAPLEEVGSVVQIAA--GPSYMLAVT----GNGVVYSFGSGSNFCL 301
            LGH D+ D+  PK +  L++   VV +A   G +  L +T    G+ VV+S+G G    L
Sbjct: 1578 LGHEDSEDQLKPKLVNALKD-NLVVDVACGNGDAQTLCITEGTGGSSVVWSWGDGDYGKL 1636

Query: 302  GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            G G       P  I T    G H+  V+ G +  +AL  +G V
Sbjct: 1637 GRGGSDGCKVPAIIDTLM--GKHITHVACGSQFSLALSKAGGV 1677



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/141 (34%), Positives = 73/141 (51%), Gaps = 12/141 (8%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P   + L+ +   QV  G      +T+ G V+ CG +T G+LG G     P   S++ L 
Sbjct: 454 PVASKDLQRLKVTQVIGGSKSLFAVTMGGKVYACGESTSGRLGLG-----PVTGSVSRLT 508

Query: 267 EV---GSVVQIA--AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 321
           +V     + ++A  +G  + +A+T +G VYS+G G    LGHG + D L PR I+TF  K
Sbjct: 509 QVLFPQPIKKLAVHSGGRHAMALTYDGHVYSWGDGEEGKLGHGSRADALTPRKIETFPEK 568

Query: 322 GIHVVRVSAGDEHVVALDSSG 342
            I    +S G  H  A+ SSG
Sbjct: 569 CIR--DISCGSSHSAAIGSSG 587



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 63/227 (27%), Positives = 103/227 (45%), Gaps = 8/227 (3%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
            I+ G  H+  I +S ++++ G  + G LGHG   T  +    +   S   VVQV+    
Sbjct: 572 DISCGSSHSAAIGSSGTLYTWGHGMYGRLGHGNNHT-LLKPKPVQALSGQQVVQVACGSR 630

Query: 174 HAAFV--LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
            A  +   Q G V++ GD      G R  +     P+ VE L G    ++  G  F+  L
Sbjct: 631 DAQTLCLTQDGLVYSWGDGDFGKLG-RGGSDGCCVPKPVERLSGQDVVKIECGAQFSLAL 689

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           +  G V T G   + +LGHG       P+ +  L E   VV +A G  + LAVT  G V+
Sbjct: 690 SRCGLVWTWGKGDYFRLGHGSDQHVRRPQVVEGLRE-HKVVDVAVGALHCLAVTEGGQVF 748

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           ++G   +   G+G      +P  +Q    +G+ + +++ G  H +A 
Sbjct: 749 AWGDNDHGQQGNGGTTVNRKPMKVQGL--EGVKITKLACGSSHSIAF 793



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 66/249 (26%), Positives = 107/249 (42%), Gaps = 15/249 (6%)

Query: 99   SVEHSSDIVETSAGNM--QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFT 155
            S++H   I+E+  G++  ++ TG  H+  I+ +  +++ G    G LGH     Q +   
Sbjct: 1533 SLDHPR-IIESLRGDLIVKVATGGSHSAAINATGGLYTWGKGRYGRLGHEDSEDQ-LKPK 1590

Query: 156  RINFPSAAHVVQVSASENHAAFVL------QSGQVFTCGDNSSFCCGHRDTNRPIFRPRL 209
             +N      VV V+     A  +        S  V++ GD      G R  +     P +
Sbjct: 1591 LVNALKDNLVVDVACGNGDAQTLCITEGTGGSSVVWSWGDGDYGKLG-RGGSDGCKVPAI 1649

Query: 210  VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 269
            ++ L G     V  G  F+  L+  G V+T G   + +LGHG       PK I  L  + 
Sbjct: 1650 IDTLMGKHITHVACGSQFSLALSKAGGVYTWGKGDYYRLGHGSDEHVRRPKLIESLRGM- 1708

Query: 270  SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
             VV+++ G  + +A   NG VY++G      +G G       PR +     +G H+  VS
Sbjct: 1709 KVVEVSVGSLHCIAAVDNGDVYTWGDNDEGQIGDGTTQATQIPRLVAAL--QGHHISHVS 1766

Query: 330  AGDEHVVAL 338
             G  H VA 
Sbjct: 1767 CGSAHTVAW 1775



 Score = 48.5 bits (114), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 55/113 (48%), Gaps = 7/113 (6%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G +   G N  GQLG   G  +  P P  S+A L+ +    Q+  G   +  VTG G V+
Sbjct: 1407 GSIFGWGHNHRGQLGGPEGAKVKIPIPCPSLAALKPI----QLVGGEQTLFTVTGEGKVF 1462

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            + G G+   LG G       P  I++ +   I  V V+AG +H++AL + G V
Sbjct: 1463 ATGYGAGGRLGIGSNESVAIPTLIESIQHVHITQVSVNAGGKHILALSNEGEV 1515


>gi|444914429|ref|ZP_21234572.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444714661|gb|ELW55540.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 648

 Score = 84.0 bits (206), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 72/240 (30%), Positives = 113/240 (47%), Gaps = 28/240 (11%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG--------PETTQCVSFTRINFPSAAH 164
           + +  G  H+L + ++ +V++ G +  G LG G        P+  Q +S           
Sbjct: 150 VAVAAGGNHSLAVRADGTVWAWGDNFAGQLGDGNILTTRWLPKQVQGLS----------G 199

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           VV  SA   H+   L  G V+  G+N+S   G+  +      P  V+ L+GV    V AG
Sbjct: 200 VVAASAGWAHSMVALSDGSVWAWGNNTSGQLGNGISVGYGALPEQVQGLRGVMA--VAAG 257

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             ++  L   G +   GSN HGQ G G T+   +   +  L     VV +AAG ++ LAV
Sbjct: 258 GLYSLALRSDGTLWAWGSNDHGQRGDGSTVYLSSSVRVRWLS---GVVAMAAGSAHSLAV 314

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             +G ++++G+     LG G + D   P+ +Q   R    VV V+AGD H +AL + G V
Sbjct: 315 RSDGTLWAWGANYYGQLGDGTRKDHDTPKRVQGLSR----VVAVAAGDGHSIALCADGTV 370



 Score = 72.0 bits (175), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 69/236 (29%), Positives = 112/236 (47%), Gaps = 17/236 (7%)

Query: 111 AGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G + ++ G  H+L +  + +V++ G +  G LG G   +       +  P  + VV VS
Sbjct: 46  SGVVAVSAGEGHSLALHRDGTVWAWGDNALGQLGDGTSDSHS---EPVRVPGLSGVVAVS 102

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
           A +NH+  +   G V+  GDN+S   G     +    P  +E L  V    V AG N + 
Sbjct: 103 AGDNHSLALRSDGSVWAWGDNNSDQLGGAPGAQSYSVPWRLEDLSEVVA--VAAGGNHSL 160

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
            +   G V   G N  GQLG G+ L  R  PK +  L     VV  +AG ++ +    +G
Sbjct: 161 AVRADGTVWAWGDNFAGQLGDGNILTTRWLPKQVQGLS---GVVAASAGWAHSMVALSDG 217

Query: 289 VVYSFGSGSNFCLGHGEQ--HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            V+++G+ ++  LG+G    +  L P  +Q  R     V+ V+AG  + +AL S G
Sbjct: 218 SVWAWGNNTSGQLGNGISVGYGAL-PEQVQGLRG----VMAVAAGGLYSLALRSDG 268



 Score = 70.9 bits (172), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 73/234 (31%), Positives = 105/234 (44%), Gaps = 14/234 (5%)

Query: 112 GNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
           G M +  G  ++L L S+ ++++ GS+  G  G G  T    S  R+ + S   VV ++A
Sbjct: 250 GVMAVAAGGLYSLALRSDGTLWAWGSNDHGQRGDG-STVYLSSSVRVRWLSG--VVAMAA 306

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
              H+  V   G ++  G N     G   T +    P+ V+ L  V    V AG   +  
Sbjct: 307 GSAHSLAVRSDGTLWAWGANYYGQLGD-GTRKDHDTPKRVQGLSRVVA--VAAGDGHSIA 363

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           L   G V T G N  GQL HG T D P P  +    E+  VV +AAG  + LAV  +G V
Sbjct: 364 LCADGTVWTWGYNHDGQLAHGSTNDSPVPLHV---RELSGVVAVAAGALHSLAVLSDGSV 420

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           +++G      LG G      +P  +Q        V  VSAG  H +A  + G V
Sbjct: 421 WAWGYNRQGQLGDGSLSSSAEPVRVQGLSG----VAAVSAGLNHSLARGTDGGV 470



 Score = 64.3 bits (155), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 68/233 (29%), Positives = 107/233 (45%), Gaps = 14/233 (6%)

Query: 111 AGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G + +  G  H+L ++S+ SV++ G +  G LG G  ++   S   +     + V  VS
Sbjct: 399 SGVVAVAAGALHSLAVLSDGSVWAWGYNRQGQLGDGSLSS---SAEPVRVQGLSGVAAVS 455

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
           A  NH+      G V+  G NS    G   T+  +  P  V  L GV  + ++AG N + 
Sbjct: 456 AGLNHSLARGTDGGVWAWGGNSFGQLGEGTTSNALV-PVRVRGLSGV--ETISAGFNHSL 512

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
                G +   G N  GQLG G T +   P  +  L  V +V    AG ++ LAV  +G 
Sbjct: 513 ARASDGGLWAWGGNYTGQLGDGTTSNSSVPVRVQGLSGVAAVF---AGLNHSLAVRTDGS 569

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           V+++G  S   LG G  +    P  +Q     G+    V+AG  H +++ S G
Sbjct: 570 VWAWGINSFGQLGEGTTNTSFAPVRVQGL--SGMET--VAAGSLHSLSVGSDG 618



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 65/232 (28%), Positives = 101/232 (43%), Gaps = 14/232 (6%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + +  G  H++ L ++ +V++ G +  G L HG      V    ++    + VV V+A  
Sbjct: 352 VAVAAGDGHSIALCADGTVWTWGYNHDGQLAHGSTNDSPVP---LHVRELSGVVAVAAGA 408

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  VL  G V+  G N     G    +     P  V+ L GV    V+AGLN +    
Sbjct: 409 LHSLAVLSDGSVWAWGYNRQGQLGDGSLSSSA-EPVRVQGLSGVAA--VSAGLNHSLARG 465

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G V   G N+ GQLG G T +   P  +  L     V  I+AG ++ LA   +G +++
Sbjct: 466 TDGGVWAWGGNSFGQLGEGTTSNALVPVRVRGLS---GVETISAGFNHSLARASDGGLWA 522

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           +G      LG G   +   P  +Q        V  V AG  H +A+ + G V
Sbjct: 523 WGGNYTGQLGDGTTSNSSVPVRVQGLSG----VAAVFAGLNHSLAVRTDGSV 570



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 60/201 (29%), Positives = 94/201 (46%), Gaps = 14/201 (6%)

Query: 107 VETSAGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV 165
           V+  +G   ++ G  H+L   ++  V++ G +  G LG G  T+  +   R+   S   V
Sbjct: 445 VQGLSGVAAVSAGLNHSLARGTDGGVWAWGGNSFGQLGEG-TTSNALVPVRVRGLSG--V 501

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
             +SA  NH+      G ++  G N +   G   T+     P  V+ L GV    V AGL
Sbjct: 502 ETISAGFNHSLARASDGGLWAWGGNYTGQLGDGTTSNSSV-PVRVQGLSGVAA--VFAGL 558

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG--SVVQIAAGPSYMLA 283
           N +  +   G V   G N+ GQLG G      T  S AP+   G   +  +AAG  + L+
Sbjct: 559 NHSLAVRTDGSVWAWGINSFGQLGEG-----TTNTSFAPVRVQGLSGMETVAAGSLHSLS 613

Query: 284 VTGNGVVYSFGSGSNFCLGHG 304
           V  +G ++S+G+  +  LGHG
Sbjct: 614 VGSDGSMWSWGNNHHGQLGHG 634



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 48/145 (33%), Positives = 67/145 (46%), Gaps = 7/145 (4%)

Query: 116 ITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I+ G  H+L   S+  +++ G +  G LG G  +   V   R+   S   V  V A  NH
Sbjct: 504 ISAGFNHSLARASDGGLWAWGGNYTGQLGDGTTSNSSVPV-RVQGLSG--VAAVFAGLNH 560

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           +  V   G V+  G NS    G   TN   F P  V+ L G+  + V AG   +  +   
Sbjct: 561 SLAVRTDGSVWAWGINSFGQLGEGTTNTS-FAPVRVQGLSGM--ETVAAGSLHSLSVGSD 617

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTP 259
           G + + G+N HGQLGHG     PTP
Sbjct: 618 GSMWSWGNNHHGQLGHGLPGRSPTP 642



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 42/125 (33%), Positives = 59/125 (47%), Gaps = 9/125 (7%)

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           + AG + +  L   G V   G N  GQLG G +     P  +  L     VV ++AG  +
Sbjct: 1   MAAGTDHSLALRHDGTVWAWGGNALGQLGDGSSDSHSEPVRVRGLS---GVVAVSAGEGH 57

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH-VVRVSAGDEHVVALD 339
            LA+  +G V+++G  +   LG G      +P      R  G+  VV VSAGD H +AL 
Sbjct: 58  SLALHRDGTVWAWGDNALGQLGDGTSDSHSEP-----VRVPGLSGVVAVSAGDNHSLALR 112

Query: 340 SSGYV 344
           S G V
Sbjct: 113 SDGSV 117


>gi|281207411|gb|EFA81594.1| hypothetical protein PPL_05585 [Polysphondylium pallidum PN500]
          Length = 624

 Score = 84.0 bits (206), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 72/233 (30%), Positives = 113/233 (48%), Gaps = 9/233 (3%)

Query: 116 ITTGRYHTL--LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           I  G  H L  L ++++V S G +  G LG G +  +C   T I+  S +  V V+A   
Sbjct: 143 IACGDSHALAVLPNDATVLSWGCNRWGQLGLGDQVNRCHP-TPISGLSQSIPVFVAAGSQ 201

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  + + G++F+ G  +    GH +   P F PR +  L G     V AGL  +  +  
Sbjct: 202 HSFVLSKFGELFSFGCGTFGRLGHGNE-LPSFNPRPISTLVGKHIVSVAAGLMHSAAVDS 260

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
           +G ++T G N +GQLG G       P     LE   ++V++  G ++ L +  NG VYSF
Sbjct: 261 QGALYTWGWNRYGQLGLGTVKKHTLPNKNKELERF-NIVKVVCGKNHTLVLDVNGHVYSF 319

Query: 294 GSGSNFC--LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             G N C  LG G   D ++P  I    ++   ++ ++AG  HV+ L   G V
Sbjct: 320 --GFNVCGQLGIGSYTDSIKPNRIDLDLKQNDEIIDIAAGYYHVLLLTKKGCV 370



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 94/205 (45%), Gaps = 18/205 (8%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINF--PSAAHVVQVSA 170
           +++  G+ HTL++  N  V+S G ++CG LG G   T  +   RI+        ++ ++A
Sbjct: 298 VKVVCGKNHTLVLDVNGHVYSFGFNVCGQLGIG-SYTDSIKPNRIDLDLKQNDEIIDIAA 356

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FT 228
              H   + + G V++ G  S    G  D      RP+L+      P        N    
Sbjct: 357 GYYHVLLLTKKGCVYSFGYISDGALGLGDVVGHQSRPKLM------PFSHFNHEFNDSID 410

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLAVTGN 287
            +  I G  +   S++   + + +   +  PK +    E+G V V+IAAG  +   +T +
Sbjct: 411 SYKEIYGEYN---SDSENDINNNNA--KLPPKVVELHNEIGDVAVKIAAGGWHSAIITSS 465

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQP 312
           G +Y+FG G NF LG+  Q D+  P
Sbjct: 466 GRLYTFGLGDNFRLGNNCQEDQDMP 490


>gi|444911351|ref|ZP_21231526.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444718109|gb|ELW58925.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 1085

 Score = 84.0 bits (206), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 72/236 (30%), Positives = 110/236 (46%), Gaps = 14/236 (5%)

Query: 111 AGNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           AG   +++   H+L +S + +V++ G +  G LG G   T     T +  P  + +V V+
Sbjct: 487 AGVDTVSSMHQHSLAVSRDGTVWAWGFNGSGRLGDG---TTLSRLTPVQVPGLSSMVAVA 543

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
           A   H+  +   G V+  GDNS+   G   T R +  P  V  L GV    + AG  ++ 
Sbjct: 544 AGSTHSLALRADGTVWAWGDNSNGALGDGTTLRRL-SPVQVPGLSGVVA--LAAGNGYSL 600

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
            +  +G V   G N  GQLG G T  R TP     L     VV +AAG S+ LA+  +GV
Sbjct: 601 AVDAQGSVWAWGYNGMGQLGDGTTTPRVTPTQAPALS---GVVALAAGDSHSLALRADGV 657

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVS 345
            +++G      LG     +   P A+        HVV ++AG+ H + L + G  S
Sbjct: 658 AWAWGGNDQGQLGDATTLERSTPAAVPGL----AHVVALAAGNAHSLVLHADGTSS 709



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 71/232 (30%), Positives = 116/232 (50%), Gaps = 14/232 (6%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           M + TG  H+L + ++ +V++ G +  G LG G +  + +    +  P  A V  +SA+ 
Sbjct: 390 MPLGTGNRHSLALHADGTVWAWGVNTAGQLGDGTDLPRTLP---VQVPGLAGVHTLSATT 446

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           +H+      G V+  GDN+    G   T + +  P  V  L GV    V++    +  ++
Sbjct: 447 SHSLAARADGTVWAWGDNAFGQLGDGTTTQRLL-PVQVPGLAGV--DTVSSMHQHSLAVS 503

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G V   G N  G+LG G TL R TP  +  L    S+V +AAG ++ LA+  +G V++
Sbjct: 504 RDGTVWAWGFNGSGRLGDGTTLSRLTPVQVPGLS---SMVAVAAGSTHSLALRADGTVWA 560

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           +G  SN  LG G     L P  +Q     G  VV ++AG+ + +A+D+ G V
Sbjct: 561 WGDNSNGALGDGTTLRRLSP--VQVPGLSG--VVALAAGNGYSLAVDAQGSV 608



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 115/240 (47%), Gaps = 16/240 (6%)

Query: 107 VETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV 165
           V+  +G + ++ G  H+L ++S+  V + G +  G LG G  T +   +T +   S   V
Sbjct: 183 VQGLSGVVALSAGSTHSLAVLSDGKVKAWGDNYYGQLGDGSSTER---WTPVLVSSLTGV 239

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCG-HRDTNRPIFRPRLVEALKGVPCKQVTAG 224
             V A   H+  +   G V   G+N S   G    T RP+  P +V  L  V  + + AG
Sbjct: 240 KSVVAGTFHSLALCSDGTVRAWGENGSGQLGISSTTRRPV--PVVVPGLTNV--QALAAG 295

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
              +  L   G V   G+N HGQ+G+G    + TP  +     VG +  IAAG ++ LA+
Sbjct: 296 SAHSLALRSDGTVRAWGNNDHGQVGNGTISQQLTPVQV---PGVGRMKSIAAGGAHSLAM 352

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             +G+ +++G  S   LG G+   +L+P  +   R +    + +  G+ H +AL + G V
Sbjct: 353 RADGITWAWGDDSQGQLGDGQSSQQLRPARVLGQRIR----MPLGTGNRHSLALHADGTV 408



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 69/236 (29%), Positives = 106/236 (44%), Gaps = 16/236 (6%)

Query: 111 AGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G + +  G  H+L L ++   ++ G +  G LG   + T     T    P  AHVV ++
Sbjct: 637 SGVVALAAGDSHSLALRADGVAWAWGGNDQGQLG---DATTLERSTPAAVPGLAHVVALA 693

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
           A   H+  +   G   + G+N     G          P  V+       K V AG + + 
Sbjct: 694 AGNAHSLVLHADGTSSSWGNN---AYGQLGDGTSTLHPVPVQVPGPSAMKGVAAGGSHSL 750

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
            +   G V   G+N  G+LG G  L RP P  +   + +GS V ++AG ++ LAV  +G 
Sbjct: 751 AVRSDGTVWAWGNNGSGELGDGTGLQRPRPVQV---QGLGSAVAVSAGTNHSLAVQSDGT 807

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH-VVRVSAGDEHVVALDSSGYV 344
           V+++G  S   LG G       P      R  G++ V+ VSAG  H +AL S G V
Sbjct: 808 VWAWGGNSQGQLGDGTGITRYVP-----VRVSGLNGVMAVSAGSAHSLALRSDGTV 858



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 64/212 (30%), Positives = 101/212 (47%), Gaps = 19/212 (8%)

Query: 112  GNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
            G + I  G +H+L + S+ +V++ G +  G LG G   T+      +  P  A +V V+A
Sbjct: 888  GVVSIAAGTHHSLAVRSDGTVWAWGYNFYGQLGDG---TKIQRSPPVQVPGLAGMVSVAA 944

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
               H+  V  +G V+  G N+    G   T + +  P  + +  GV    + A  N+   
Sbjct: 945  GTYHSLAVHSNGTVWAWGYNNHGQLGDGTTTQRLL-PVPISSSSGV----IAAAANWH-S 998

Query: 231  LTIR--GHVHTCGSNTHGQLGHGDTLDR--PTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
            L +R  G V   GSN   QLG G T DR  PTP S+        V  I++G ++ LA+  
Sbjct: 999  LVVRTDGTVWGWGSNNASQLGDGSTSDRKMPTPSSVP-----NGVRSISSGANHSLALRS 1053

Query: 287  NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 318
            +G V+++G G++  LG G     L P  +  F
Sbjct: 1054 DGTVWAWGFGNSGQLGDGVMSMRLVPAGVSGF 1085



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 70/235 (29%), Positives = 105/235 (44%), Gaps = 16/235 (6%)

Query: 112 GNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
           G+ Q+  G  H+L++ S+ +V++ G +  G LG G   TQ +    +   S   VV ++ 
Sbjct: 38  GHEQVAAGAAHSLMLRSDGTVWAWGDNTYGQLGDGTGITQRLP---VRVQSLDSVVALAV 94

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              H+  +   G V+  GDN     G   D    +  P  V +L GV    + AG + + 
Sbjct: 95  GYQHSLALRSDGTVWAWGDNFFGQLGDGSDAQSQV--PIQVWSLNGVVA--IAAGDHHSL 150

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
            L   G V   G N HGQLG   T+  P P  +  L     VV ++AG ++ LAV  +G 
Sbjct: 151 ALLSDGSVWAWGYNAHGQLGDDTTVASPLPVQVQGLS---GVVALSAGSTHSLAVLSDGK 207

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           V ++G      LG G   +   P  + +       V  V AG  H +AL S G V
Sbjct: 208 VKAWGDNYYGQLGDGSSTERWTPVLVSSL----TGVKSVVAGTFHSLALCSDGTV 258



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 92/205 (44%), Gaps = 10/205 (4%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + ++ G  H+L + S+ +V++ G +  G LG G   T    +  +       V+ VSA  
Sbjct: 790 VAVSAGTNHSLAVQSDGTVWAWGGNSQGQLGDG---TGITRYVPVRVSGLNGVMAVSAGS 846

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +   G V+  G N     G   + + +  P  V  L GV    + AG + +  + 
Sbjct: 847 AHSLALRSDGTVWAWGYNFYGQLGDATSTQRLV-PIQVPGLTGV--VSIAAGTHHSLAVR 903

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G V   G N +GQLG G  + R  P  +  L     +V +AAG  + LAV  NG V++
Sbjct: 904 SDGTVWAWGYNFYGQLGDGTKIQRSPPVQVPGLA---GMVSVAAGTYHSLAVHSNGTVWA 960

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQT 317
           +G  ++  LG G     L P  I +
Sbjct: 961 WGYNNHGQLGDGTTTQRLLPVPISS 985


>gi|395501386|ref|XP_003755076.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Sarcophilus harrisii]
          Length = 979

 Score = 84.0 bits (206), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 61/226 (26%), Positives = 107/226 (47%), Gaps = 7/226 (3%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G ++    G   T   I  PR +++L  +   Q+  G   +  L+    V +
Sbjct: 101 DKGQVYAWGLDTDGQLGLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFS 160

Query: 240 CGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N HGQLG G  L R  +P+ I  L  +    Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKHGQLGLGFELKRQSSPQLIKSLLGI-PFTQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V
Sbjct: 220 GQLGLNDENDRFVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGV 263



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 71/206 (34%), Positives = 98/206 (47%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QI  G YH+L +S  S VFS G +  G LG G E  +  S   I         QV+A  
Sbjct: 140 VQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   F P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-FVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 67/213 (31%), Positives = 98/213 (46%), Gaps = 9/213 (4%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 253
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G +T GQLG   T
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGT 121

Query: 254 LDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
            +    P++I  L ++  +VQIA G  + LA++    V+S+G   +  LG G E   +  
Sbjct: 122 EEYIRVPRNIKSLTDI-QIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           P+ I++    GI   +V+AG  H   L  SG +
Sbjct: 181 PQLIKSLL--GIPFTQVAAGGAHSFVLTLSGAI 211



 Score = 54.3 bits (129), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 54/217 (24%), Positives = 98/217 (45%), Gaps = 7/217 (3%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P+  +SL D+   Q+   +     +S+  ++    + N + +  L F    + S  ++++
Sbjct: 128 PRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQ-NKHGQLGLGFELKRQSSPQLIKS 186

Query: 110 SAG--NMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV 166
             G    Q+  G  H+ +++ S ++F  G +  G LG   E  + V    +    +  +V
Sbjct: 187 LLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVP-NLLKSLRSQKIV 245

Query: 167 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
            +   E+H A + + G VFT G       GH  T+  I  PR V  L G    Q+  G  
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKVFELMGSIVTQIACGRQ 304

Query: 227 FT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
            T  F+   G +++ G   +GQLG G T +R +P ++
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341


>gi|148922863|ref|NP_001092233.1| uncharacterized protein LOC100073325 [Danio rerio]
 gi|146218416|gb|AAI39898.1| Zgc:163136 protein [Danio rerio]
          Length = 994

 Score = 84.0 bits (206), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 55/178 (30%), Positives = 87/178 (48%), Gaps = 3/178 (1%)

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
            V+Q++  + H+  +   G +F  G+N+    G R        P+ +++L  +P  Q++A
Sbjct: 117 QVIQIACGDQHSMALSNDGLLFVWGENALGQLGLRKEQAGTQSPQHLQSLCEIPVAQISA 176

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G N +  L++ G V   GSN+ GQLG GDT DR  P  +  L      V I+ G  +   
Sbjct: 177 GGNHSFVLSLSGVVFGWGSNSAGQLGLGDTTDRFIPTIVKSLSG-KKTVSISCGGEHTAT 235

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           ++  G V++FGSG    LGH    DE  PR +      G  V +V+ G  H +  + S
Sbjct: 236 LSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLVAELW--GSKVSQVTCGRHHTLVFEDS 291



 Score = 73.9 bits (180), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 68/205 (33%), Positives = 94/205 (45%), Gaps = 6/205 (2%)

Query: 114 MQITTGRYHTLLISNSSV-FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QI  G  H++ +SN  + F  G +  G LG   E     S   +       V Q+SA  
Sbjct: 119 IQIACGDQHSMALSNDGLLFVWGENALGQLGLRKEQAGTQSPQHLQSLCEIPVAQISAGG 178

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           NH+  +  SG VF  G NS+   G  DT    F P +V++L G     ++ G   T  L+
Sbjct: 179 NHSFVLSLSGVVFGWGSNSAGQLGLGDTTDR-FIPTIVKSLSGKKTVSISCGGEHTATLS 237

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLAV-TGNGVV 290
             G V T GS   GQLGH    D   P+ +A L   GS V Q+  G  + L     +  +
Sbjct: 238 KGGTVFTFGSGGFGQLGHNSLKDEHHPRLVAEL--WGSKVSQVTCGRHHTLVFEDSSNRI 295

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAI 315
           YSFG G    LG+GEQ  +  P  +
Sbjct: 296 YSFGCGMQGQLGNGEQVKQSVPLPV 320



 Score = 55.1 bits (131), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 51/164 (31%), Positives = 75/164 (45%), Gaps = 6/164 (3%)

Query: 98  QSVEHSSDIVETSAGNMQITTGRYHTLLISNSSV-FSCGSSLCGVLGHGPETTQCVSFTR 156
           QS +H   + E      QI+ G  H+ ++S S V F  GS+  G LG G  T + +  T 
Sbjct: 158 QSPQHLQSLCEIPVA--QISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTTDRFIP-TI 214

Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
           +   S    V +S    H A + + G VFT G       GH ++ +    PRLV  L G 
Sbjct: 215 VKSLSGKKTVSISCGGEHTATLSKGGTVFTFGSGGFGQLGH-NSLKDEHHPRLVAELWGS 273

Query: 217 PCKQVTAGLNFT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP 259
              QVT G + T  F      +++ G    GQLG+G+ + +  P
Sbjct: 274 KVSQVTCGRHHTLVFEDSSNRIYSFGCGMQGQLGNGEQVKQSVP 317


>gi|224105957|ref|XP_002313993.1| predicted protein [Populus trichocarpa]
 gi|222850401|gb|EEE87948.1| predicted protein [Populus trichocarpa]
          Length = 1104

 Score = 84.0 bits (206), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 57/189 (30%), Positives = 95/189 (50%), Gaps = 13/189 (6%)

Query: 159 FPSAAH------VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA 212
           FP A        V  ++    HAA V + G++F+ G+ S    GH   +  +  P+L++A
Sbjct: 300 FPKALESAVVLDVQNIACGGQHAALVTKQGEIFSWGEESGGRLGH-GVDSDVMHPKLIDA 358

Query: 213 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVG 269
           L     + V  G   T  +T+ G ++T G  T+  G LGHG+ +    PK +  PLE + 
Sbjct: 359 LSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGI- 417

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
            V  I+ GP +   VT  G +++FG G+   LGHG++     P+ +++   KG+  V+ +
Sbjct: 418 HVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSISLPKEVESL--KGLRTVQAA 475

Query: 330 AGDEHVVAL 338
            G  H  A+
Sbjct: 476 CGVWHTAAV 484



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 102/225 (45%), Gaps = 18/225 (8%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           I+ G +HT +++++  +F+ G    GVLGHG    + +S  + +        VQ +    
Sbjct: 422 ISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR--KSISLPKEVESLKGLRTVQAACGVW 479

Query: 174 HAAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
           H A V++            SG++FT GD      GH D    +  P  V AL      QV
Sbjct: 480 HTAAVIEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV-PTCVAALVEPNFCQV 538

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
             G + T   T  GHV+T GS  +GQLG+    D   P  +        V +IA G  ++
Sbjct: 539 ACGHSLTVARTTSGHVYTMGSPVYGQLGN-PLADGKLPTRVEGKLSKSFVEEIACGAYHV 597

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
             +T    VY++G G+N  LGHG+  D   P  ++  + K +  +
Sbjct: 598 AVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSI 642



 Score = 67.8 bits (164), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 65/240 (27%), Positives = 106/240 (44%), Gaps = 18/240 (7%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G++  L+     +FS G    G LGHG + +  +    I+  S  ++  V+  E H   V
Sbjct: 319 GQHAALVTKQGEIFSWGEESGGRLGHGVD-SDVMHPKLIDALSNTNIELVACGEYHTCAV 377

Query: 179 LQSGQVFTCGDNS-SF-CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             SG ++T GD + +F   GH +        R+   L+G+    ++ G   T  +T  G 
Sbjct: 378 TLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ 437

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV------------ 284
           + T G  T G LGHGD      PK +  L+ +   VQ A G  +  AV            
Sbjct: 438 LFTFGDGTFGVLGHGDRKSISLPKEVESLKGL-RTVQAACGVWHTAAVIEVMVGNSSSSN 496

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             +G ++++G G    LGHG++  +L P  +        +  +V+ G    VA  +SG+V
Sbjct: 497 CSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEP--NFCQVACGHSLTVARTTSGHV 554



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 89/195 (45%), Gaps = 12/195 (6%)

Query: 94  LRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVS 153
           L+ L++V+ +  +  T+A  +++  G   +   S+  +F+ G    G LGHG +  + V 
Sbjct: 466 LKGLRTVQAACGVWHTAA-VIEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVP 524

Query: 154 FTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            T +      +  QV+   +       SG V+T G       G+     P+   +L   +
Sbjct: 525 -TCVAALVEPNFCQVACGHSLTVARTTSGHVYTMGSPVYGQLGN-----PLADGKLPTRV 578

Query: 214 KGVPCK----QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 269
           +G   K    ++  G      LT +  V+T G   +G+LGHGDT DR +P  +  L++  
Sbjct: 579 EGKLSKSFVEEIACGAYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDK- 637

Query: 270 SVVQIAAGPSYMLAV 284
            V  IA G S+  A+
Sbjct: 638 QVKSIACGTSFTAAI 652


>gi|218196711|gb|EEC79138.1| hypothetical protein OsI_19792 [Oryza sativa Indica Group]
          Length = 1385

 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 60/193 (31%), Positives = 98/193 (50%), Gaps = 9/193 (4%)

Query: 150 QCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHR-DTNRPIFRPR 208
            C+    + F     V  +S    HA  V + G++++ G+ S    GH  D + P  +P+
Sbjct: 342 DCLIPKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVP--QPK 399

Query: 209 LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APL 265
           L++AL  +  + V  G   T  +T+ G ++T G+ T   G LGHG+ +    PK +  PL
Sbjct: 400 LIDALANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPL 459

Query: 266 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
           E +  V  I+ GP +   VT  G +++FG GS   LGHG++     PR +++   KG+  
Sbjct: 460 EGI-HVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESL--KGLRT 516

Query: 326 VRVSAGDEHVVAL 338
           VR + G  H  A+
Sbjct: 517 VRAACGVWHTAAV 529



 Score = 77.8 bits (190), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 106/230 (46%), Gaps = 28/230 (12%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           I+ G +HT +++++  +F+ G    GVLGHG    Q +S  R +        V+ +    
Sbjct: 467 ISCGPWHTAIVTSAGQLFTFGDGSFGVLGHG--DRQSLSVPREVESLKGLRTVRAACGVW 524

Query: 174 HAAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
           H A V++            SG++FT GD      GH D +  +  P  V AL      Q+
Sbjct: 525 HTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLV-PTCVAALVEPNFCQI 583

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAA 276
             G   T  LT  GHV+T GS  +GQLG+      P    + P+   G      V +I+ 
Sbjct: 584 ACGHCMTVALTTSGHVYTMGSPVYGQLGN------PQADGMLPVRVEGKLHKNFVEEISC 637

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
           G  ++  +T    VY++G G+N  LGHG+  D   P  +++ + K +  V
Sbjct: 638 GAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRSSPTLVESLKDKQVRTV 687



 Score = 64.3 bits (155), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 60/245 (24%), Positives = 104/245 (42%), Gaps = 28/245 (11%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHG-----PETTQCVSFTRINFPSAAHVVQVSASEN 173
           GR+ TL+     ++S G    G LGHG     P+     +   +N      +  V+  E 
Sbjct: 364 GRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALANMN------IELVACGEY 417

Query: 174 HAAFVLQSGQVFTCGDNSSFC--CGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           H   V  SG ++T G+ +S     GH +        R+   L+G+    ++ G   T  +
Sbjct: 418 HTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLEGIHVSAISCGPWHTAIV 477

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE------------EVGSVVQIAAGPS 279
           T  G + T G  + G LGHGD      P+ +  L+               +VV++  G +
Sbjct: 478 TSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLKGLRTVRAACGVWHTAAVVEVMVG-N 536

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
              +   +G ++++G G    LGHG++   L P  +        +  +++ G    VAL 
Sbjct: 537 SSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALVEP--NFCQIACGHCMTVALT 594

Query: 340 SSGYV 344
           +SG+V
Sbjct: 595 TSGHV 599



 Score = 47.0 bits (110), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 46/181 (25%), Positives = 77/181 (42%), Gaps = 19/181 (10%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQC 151
           R +R    V H++ +VE       +  G   +   S+  +F+ G    G LGHG + T+ 
Sbjct: 515 RTVRAACGVWHTAAVVE-------VMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRL 567

Query: 152 V-----SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR 206
           V     +    NF       Q++        +  SG V+T G       G+   +  +  
Sbjct: 568 VPTCVAALVEPNF------CQIACGHCMTVALTTSGHVYTMGSPVYGQLGNPQADG-MLP 620

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            R+   L     ++++ G      LT R  V+T G   +G+LGHGDT DR +P  +  L+
Sbjct: 621 VRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRSSPTLVESLK 680

Query: 267 E 267
           +
Sbjct: 681 D 681



 Score = 41.2 bits (95), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 57/127 (44%), Gaps = 9/127 (7%)

Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH---VVQVSA 170
           QI  G   T+ ++ S  V++ GS + G LG+     Q      +      H   V ++S 
Sbjct: 582 QIACGHCMTVALTTSGHVYTMGSPVYGQLGN----PQADGMLPVRVEGKLHKNFVEEISC 637

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
              H A +    +V+T G  ++   GH DT+     P LVE+LK    + V  G+NFT  
Sbjct: 638 GAYHVAVLTSRTEVYTWGKGANGRLGHGDTDD-RSSPTLVESLKDKQVRTVVCGINFTAA 696

Query: 231 LTIRGHV 237
           + I   V
Sbjct: 697 ICIHKWV 703


>gi|356499563|ref|XP_003518608.1| PREDICTED: uncharacterized protein LOC100805364 [Glycine max]
          Length = 1120

 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/168 (33%), Positives = 88/168 (52%), Gaps = 7/168 (4%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           HA+ V + G+VFT G+ S    GH    + + +PRLVEAL       V  G   +  +T+
Sbjct: 289 HASLVTRQGEVFTWGEESGGRLGH-GVGKNVVQPRLVEALISTTIDFVACGEFHSCAVTM 347

Query: 234 RGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            G ++T G   H  G LGHG  +    PK IA PLE +  +  +A GP +   +T  G +
Sbjct: 348 AGELYTWGDGMHNAGLLGHGSNVSHWIPKRIAGPLEGL-QIAFVACGPWHTALITSTGQL 406

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           ++FG G+   LGHG++ +   PR +++    G+  + V+ G  H  A+
Sbjct: 407 FTFGDGTFGVLGHGDRQNVSYPREVESLL--GLRTIAVACGVWHTAAV 452



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 74/245 (30%), Positives = 110/245 (44%), Gaps = 23/245 (9%)

Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTR--------------INFP 160
           +  G +HT LI S   +F+ G    GVLGHG    Q VS+ R                  
Sbjct: 390 VACGPWHTALITSTGQLFTFGDGTFGVLGHGDR--QNVSYPREVESLLGLRTIAVACGVW 447

Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
             A VV+V A+  H+   + SG++FT GD      GH D      +P  V AL      +
Sbjct: 448 HTAAVVEVIAT--HSGTSISSGKLFTWGDGDKNRLGHGD-KEARLKPTCVSALIDYNFHK 504

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           +  G + T  LT  G V T GS  +GQLG   + D   P  +       S+ +IA G  +
Sbjct: 505 IACGHSLTVGLTTSGRVFTMGSTVYGQLGSSLS-DGKVPCLVGDKIAGESIEEIACGAYH 563

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           +  +T    VY++G G+N  LGHG+  D   P  ++  + +  HV  ++ G  +  A+  
Sbjct: 564 VAVLTSKNEVYTWGKGANGRLGHGDIEDRKTPALVEALKDR--HVKYIACGSNYSAAICL 621

Query: 341 SGYVS 345
             +VS
Sbjct: 622 HKWVS 626



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 82/338 (24%), Positives = 138/338 (40%), Gaps = 44/338 (13%)

Query: 28  SAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCN 87
           SA D+  + ++S     SHG  P  + +L D+         ++  G  +NV        N
Sbjct: 207 SASDVFRVSVSSAPSTSSHGSAPDDYDALWDVYIWGEVTCENVKVGADKNV--------N 258

Query: 88  GNWKRVLRFLQSVEHSSDIVETSAGNMQITTG-RYHTLLISNSSVFSCGSSLCGVLGHG- 145
               R    L     S+ +++       I  G R+ +L+     VF+ G    G LGHG 
Sbjct: 259 YFSPRADVLLPRPLESNVVLDV----HHIACGVRHASLVTRQGEVFTWGEESGGRLGHGV 314

Query: 146 ------PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGH 197
                 P   + +  T I+F        V+  E H+  V  +G+++T GD  +++   GH
Sbjct: 315 GKNVVQPRLVEALISTTIDF--------VACGEFHSCAVTMAGELYTWGDGMHNAGLLGH 366

Query: 198 RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP 257
                     R+   L+G+    V  G   T  +T  G + T G  T G LGHGD  +  
Sbjct: 367 GSNVSHWIPKRIAGPLEGLQIAFVACGPWHTALITSTGQLFTFGDGTFGVLGHGDRQNVS 426

Query: 258 TPKSIAPLEEVGSVVQIAAGPSYMLAVT-----------GNGVVYSFGSGSNFCLGHGEQ 306
            P+ +  L  + ++  +A G  +  AV             +G ++++G G    LGHG++
Sbjct: 427 YPREVESLLGLRTIA-VACGVWHTAAVVEVIATHSGTSISSGKLFTWGDGDKNRLGHGDK 485

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              L+P  +        H  +++ G    V L +SG V
Sbjct: 486 EARLKPTCVSALIDYNFH--KIACGHSLTVGLTTSGRV 521


>gi|390336982|ref|XP_795107.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Strongylocentrotus purpuratus]
          Length = 1391

 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 69/220 (31%), Positives = 105/220 (47%), Gaps = 10/220 (4%)

Query: 130 SVFSCGSSLCGVLG---HGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 186
           + F  GSS+ G LG    G +TTQ V+   +   S   V  +S  ++H   VL  G ++ 
Sbjct: 2   ATFCWGSSMEGQLGIGITGGQTTQEVA-KEVTTLSGQRVQSISCGKHHTGIVLDDGTLYM 60

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
           CG NS    G    +R  ++P  V AL+ V  K V  G + T  ++ RG V   G N  G
Sbjct: 61  CGANSK---GQLGQDRNQYKPVQVSALETVVIKHVACGDDHTLAVSDRGQVLGWGRNDRG 117

Query: 247 Q--LGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG 304
           Q  L  GD  ++P P+ +  L      V++  G  + +A+T +G ++S+G  +   LG G
Sbjct: 118 QCGLATGDIENKPRPRILKHLASY-QFVKVCCGSLHSMALTRDGRLFSWGDNTYGQLGIG 176

Query: 305 EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
                   R  +    +G+ +VRV+ G  H  AL  SG V
Sbjct: 177 TLVTNYTDRPTELTSLRGVPLVRVACGGFHSFALTISGSV 216



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 105/230 (45%), Gaps = 8/230 (3%)

Query: 116 ITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASEN 173
           +  G  HTL +S+   V   G +  G  G      +     RI    ++   V+V     
Sbjct: 92  VACGDDHTLAVSDRGQVLGWGRNDRGQCGLATGDIENKPRPRILKHLASYQFVKVCCGSL 151

Query: 174 HAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           H+  + + G++F+ GDN+      G   TN    RP  + +L+GVP  +V  G   +  L
Sbjct: 152 HSMALTRDGRLFSWGDNTYGQLGIGTLVTNY-TDRPTELTSLRGVPLVRVACGGFHSFAL 210

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           TI G V   G N  GQLG G+  ++  P  +  +     V  IA G  +   +T +G V+
Sbjct: 211 TISGSVFGWGKNDVGQLGLGNKENKAYPTLLRNMRS-QMVKHIACGQDHTAMLTADGGVF 269

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
            FG GS   LGHG  ++E+ PR +      G  + +V+ G  H + L+ S
Sbjct: 270 LFGQGSEGQLGHGSNYNEVNPRKVIDLM--GSDITQVTCGKHHTLVLEGS 317



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 105/230 (45%), Gaps = 8/230 (3%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASEN 173
           +  G  HTL +S+   V   G +  G  G      +     RI    ++   V+V     
Sbjct: 432 VACGDDHTLAVSDRVQVLGWGRNDRGQCGLATGDIENKPRPRILRHLASYQFVKVCCGSL 491

Query: 174 HAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           H+  + + G++F+ GDN+      G   TN    RP  + +L+GVP  +V  G   +  L
Sbjct: 492 HSMALTRDGRLFSWGDNTYGQLGIGTLVTNY-TDRPTELTSLRGVPLVRVACGGFHSFAL 550

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           TI G V   G N  GQLG G+  ++  P  +  +     V  IA G  +   +T +G V+
Sbjct: 551 TISGSVFGWGKNDVGQLGLGNKENKSYPTLLRNMRS-QMVKHIACGQDHTAMLTADGGVF 609

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
            FG GS   LGHG  ++E+ PR +      G  + +V+ G  H + L+ S
Sbjct: 610 LFGQGSEGQLGHGSNYNEVNPRKVIDLM--GSDITQVTCGKHHTLVLEGS 657



 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 66/263 (25%), Positives = 108/263 (41%), Gaps = 42/263 (15%)

Query: 115 QITTGRYHTLLISNSS--VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           Q+T G++HTL++  S   +++ G  + G LG   E   C +  R+  P   H    S++E
Sbjct: 303 QVTCGKHHTLVLEGSKGRLYAFGQGIHGQLGQD-EARSCSNPQRVPGPWVPH----SSTE 357

Query: 173 NHAAFVLQSGQVFTC---------------GDNSSFCCGHRDTNRPIF------------ 205
            +++     G+V  C                D+       RD +  IF            
Sbjct: 358 KNSS---SKGRVVRCIYAGGHHCFSTATNAADDIQIKLLFRDISTRIFFQLTXXXXXXXX 414

Query: 206 --RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ--LGHGDTLDRPTPKS 261
                    L+ V  K V  G + T  ++ R  V   G N  GQ  L  GD  ++P P+ 
Sbjct: 415 XXXXXXXXXLETVVIKHVACGDDHTLAVSDRVQVLGWGRNDRGQCGLATGDIENKPRPRI 474

Query: 262 IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 321
           +  L      V++  G  + +A+T +G ++S+G  +   LG G        R  +    +
Sbjct: 475 LRHLASY-QFVKVCCGSLHSMALTRDGRLFSWGDNTYGQLGIGTLVTNYTDRPTELTSLR 533

Query: 322 GIHVVRVSAGDEHVVALDSSGYV 344
           G+ +VRV+ G  H  AL  SG V
Sbjct: 534 GVPLVRVACGGFHSFALTISGSV 556



 Score = 47.8 bits (112), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 66/151 (43%), Gaps = 4/151 (2%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G +H+  ++ S SVF  G +  G LG G +  +       N  S   V  ++  +
Sbjct: 538 VRVACGGFHSFALTISGSVFGWGKNDVGQLGLGNKENKSYPTLLRNMRSQM-VKHIACGQ 596

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           +H A +   G VF  G  S    GH  +N     PR V  L G    QVT G + T  L 
Sbjct: 597 DHTAMLTADGGVFLFGQGSEGQLGH-GSNYNEVNPRKVIDLMGSDITQVTCGKHHTLVLE 655

Query: 233 -IRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
             +G ++  G   HGQLG  +      P+ +
Sbjct: 656 GSKGRLYAFGQGIHGQLGQDEARSCSNPQRV 686


>gi|395501382|ref|XP_003755074.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Sarcophilus harrisii]
          Length = 1057

 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/226 (26%), Positives = 107/226 (47%), Gaps = 7/226 (3%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G ++    G   T   I  PR +++L  +   Q+  G   +  L+    V +
Sbjct: 101 DKGQVYAWGLDTDGQLGLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFS 160

Query: 240 CGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N HGQLG G  L R  +P+ I  L  +    Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKHGQLGLGFELKRQSSPQLIKSLLGI-PFTQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V
Sbjct: 220 GQLGLNDENDRFVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGV 263



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 71/206 (34%), Positives = 98/206 (47%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QI  G YH+L +S  S VFS G +  G LG G E  +  S   I         QV+A  
Sbjct: 140 VQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   F P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-FVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 67/213 (31%), Positives = 98/213 (46%), Gaps = 9/213 (4%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 253
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G +T GQLG   T
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGT 121

Query: 254 LDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
            +    P++I  L ++  +VQIA G  + LA++    V+S+G   +  LG G E   +  
Sbjct: 122 EEYIRVPRNIKSLTDI-QIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           P+ I++    GI   +V+AG  H   L  SG +
Sbjct: 181 PQLIKSLL--GIPFTQVAAGGAHSFVLTLSGAI 211



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 54/217 (24%), Positives = 98/217 (45%), Gaps = 7/217 (3%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P+  +SL D+   Q+   +     +S+  ++    + N + +  L F    + S  ++++
Sbjct: 128 PRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQ-NKHGQLGLGFELKRQSSPQLIKS 186

Query: 110 SAG--NMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV 166
             G    Q+  G  H+ +++ S ++F  G +  G LG   E  + V    +    +  +V
Sbjct: 187 LLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVP-NLLKSLRSQKIV 245

Query: 167 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
            +   E+H A + + G VFT G       GH  T+  I  PR V  L G    Q+  G  
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKVFELMGSIVTQIACGRQ 304

Query: 227 FT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
            T  F+   G +++ G   +GQLG G T +R +P ++
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341


>gi|301755558|ref|XP_002913646.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC6-like [Ailuropoda melanoleuca]
          Length = 1189

 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 65/187 (34%), Positives = 93/187 (49%), Gaps = 6/187 (3%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++ G YH+L +S    VFS GS+  G LG G E     S  R+       + QV+A  
Sbjct: 131 IQVSCGHYHSLALSEGGQVFSWGSNSHGQLGLGKECPSQASPQRVRSLDGIPLTQVAAGG 190

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPI--FRPRLVEALKGVPCKQVTAGLNFTGF 230
            H+  +  SG  F  G N++     R  N P+   +PR + ALK +    ++ G   T  
Sbjct: 191 AHSFALSLSGASFGWGSNNAGQLALRQNNVPVQSHKPRSIGALKNLGVIYISCGYEHTAV 250

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA-VTGNGV 289
           LT  G V T G N++GQLGH  T ++  P+ +  ++  G V QI  G  + LA V   G 
Sbjct: 251 LTQTGKVFTFGGNSYGQLGHSPTAEKEGPQLVEGID--GLVSQIDCGSYHTLAYVYTTGK 308

Query: 290 VYSFGSG 296
           V SFG G
Sbjct: 309 VVSFGRG 315



 Score = 72.4 bits (176), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 67/242 (27%), Positives = 114/242 (47%), Gaps = 23/242 (9%)

Query: 115 QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVV 166
           Q  +G  H+LL+ SN  + SCG +  G LG         P+  + +   R++        
Sbjct: 27  QAASGERHSLLLLSNGELHSCGDNSQGQLGRKGVQRDEHPKRIRTLDNLRVDL------- 79

Query: 167 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
            VS  + H+  V   G+VF  G  S    G  +       P  ++ L G+   QV+ G  
Sbjct: 80  -VSCGKEHSLAVCYKGRVFAWGAGSEGQLGVGEFKEINLIPTKIKTLTGIKIIQVSCGHY 138

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            +  L+  G V + GSN+HGQLG G +   + +P+ +  L+ +  + Q+AAG ++  A++
Sbjct: 139 HSLALSEGGQVFSWGSNSHGQLGLGKECPSQASPQRVRSLDGI-PLTQVAAGGAHSFALS 197

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQ---PRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            +G  + +GS +   L   + +  +Q   PR+I   +  G  V+ +S G EH   L  +G
Sbjct: 198 LSGASFGWGSNNAGQLALRQNNVPVQSHKPRSIGALKNLG--VIYISCGYEHTAVLTQTG 255

Query: 343 YV 344
            V
Sbjct: 256 KV 257



 Score = 71.6 bits (174), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 65/228 (28%), Positives = 106/228 (46%), Gaps = 12/228 (5%)

Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           ++ G+ H+L +     VF+ G+   G LG G      +  T+I   +   ++QVS    H
Sbjct: 80  VSCGKEHSLAVCYKGRVFAWGAGSEGQLGVGEFKEINLIPTKIKTLTGIKIIQVSCGHYH 139

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           +  + + GQVF+ G NS    G          P+ V +L G+P  QV AG   +  L++ 
Sbjct: 140 SLALSEGGQVFSWGSNSHGQLGLGKECPSQASPQRVRSLDGIPLTQVAAGGAHSFALSLS 199

Query: 235 GHVHTCGSNTHGQLG---HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           G     GSN  GQL    +   +    P+SI  L+ +G V+ I+ G  +   +T  G V+
Sbjct: 200 GASFGWGSNNAGQLALRQNNVPVQSHKPRSIGALKNLG-VIYISCGYEHTAVLTQTGKVF 258

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH--VVRVSAGDEHVVA 337
           +FG  S   LGH    ++  P+ ++     GI   V ++  G  H +A
Sbjct: 259 TFGGNSYGQLGHSPTAEKEGPQLVE-----GIDGLVSQIDCGSYHTLA 301



 Score = 70.9 bits (172), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 52/184 (28%), Positives = 95/184 (51%), Gaps = 6/184 (3%)

Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
           + A + Q ++ E H+  +L +G++ +CGDNS    G +   R    P+ +  L  +    
Sbjct: 21  AGAELRQAASGERHSLLLLSNGELHSCGDNSQGQLGRKGVQRDE-HPKRIRTLDNLRVDL 79

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPS 279
           V+ G   +  +  +G V   G+ + GQLG G+  +    P  I  L  +  ++Q++ G  
Sbjct: 80  VSCGKEHSLAVCYKGRVFAWGAGSEGQLGVGEFKEINLIPTKIKTLTGI-KIIQVSCGHY 138

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           + LA++  G V+S+GS S+  LG G++   +  P+ +++    GI + +V+AG  H  AL
Sbjct: 139 HSLALSEGGQVFSWGSNSHGQLGLGKECPSQASPQRVRSL--DGIPLTQVAAGGAHSFAL 196

Query: 339 DSSG 342
             SG
Sbjct: 197 SLSG 200



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 48/140 (34%), Positives = 70/140 (50%), Gaps = 5/140 (3%)

Query: 207 PRLVEA-LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 265
           PR  +A   G   +Q  +G   +  L   G +H+CG N+ GQLG         PK I  L
Sbjct: 13  PRRRQAGXAGAELRQAASGERHSLLLLSNGELHSCGDNSQGQLGRKGVQRDEHPKRIRTL 72

Query: 266 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGIH 324
           + +  V  ++ G  + LAV   G V+++G+GS   LG GE +   L P  I+T    GI 
Sbjct: 73  DNL-RVDLVSCGKEHSLAVCYKGRVFAWGAGSEGQLGVGEFKEINLIPTKIKTL--TGIK 129

Query: 325 VVRVSAGDEHVVALDSSGYV 344
           +++VS G  H +AL   G V
Sbjct: 130 IIQVSCGHYHSLALSEGGQV 149


>gi|298710216|emb|CBJ26291.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 1089

 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 70/235 (29%), Positives = 109/235 (46%), Gaps = 8/235 (3%)

Query: 109 TSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPE-TTQCVSFTRINFPSAAHVV 166
           +  G +++  G  H+L ++ S  +++ G +L G LG G   T +  +  ++     A + 
Sbjct: 94  SGKGVVKMAAGLEHSLALTESGDLYAFGDNLSGQLGLGHNFTAKEQTPQKVPPLGRAKIT 153

Query: 167 QVSASENHAAFVLQSGQVFTCGDNSSFC---CGHRDTNRPIFR--PRLVEALKGVPCKQV 221
           Q++  ++H A +  SG++F  G+N        GH +   PI    P+LV  LKG    Q+
Sbjct: 154 QLACGQDHTAVLTSSGELFMFGNNRDGALGVAGHANEGPPIVASAPQLVTGLKGKHVVQI 213

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
             GL  T  LT  G V+  G N  GQLG GDT +R TP  +         + +A G  + 
Sbjct: 214 GCGLQHTVALTAAGGVYCWGENGRGQLGTGDTQNRYTPSLVCKPLSAFKCIHVACGGQHT 273

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
           +AVT    VY FGS  +  LG G +   + P   +  R  G  V     G  H +
Sbjct: 274 IAVTDCDDVYGFGSDRHGQLGLG-RRGVIVPVPTRIVRLGGRRVKNCVGGAWHTI 327



 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 64/226 (28%), Positives = 99/226 (43%), Gaps = 14/226 (6%)

Query: 129 SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA--HVVQVSASENHAAFVLQSGQV-- 184
           S V++ G +  G LG+G  T       R+ F  A    + +V     H   +   G V  
Sbjct: 8   SLVWAVGGNSKGQLGNGTPTQSSFLPCRVAFQLAPTQRIAEVFCGYEHTFALTSDGDVLG 67

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
           F  G       G+ D++     P+ V  L G    ++ AGL  +  LT  G ++  G N 
Sbjct: 68  FGNGVKGQLGIGNTDSHS---NPQRVHLLSGKGVVKMAAGLEHSLALTESGDLYAFGDNL 124

Query: 245 HGQ--LGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
            GQ  LGH  T    TP+ + PL     + Q+A G  +   +T +G ++ FG+  +  LG
Sbjct: 125 SGQLGLGHNFTAKEQTPQKVPPLGRA-KITQLACGQDHTAVLTSSGELFMFGNNRDGALG 183

Query: 303 HGEQHDELQPRAIQTFR----RKGIHVVRVSAGDEHVVALDSSGYV 344
                +E  P      +     KG HVV++  G +H VAL ++G V
Sbjct: 184 VAGHANEGPPIVASAPQLVTGLKGKHVVQIGCGLQHTVALTAAGGV 229



 Score = 48.1 bits (113), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 53/115 (46%), Gaps = 12/115 (10%)

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP------LEEVGSVVQIAAGPSYMLAVTGN 287
           R  V   G N+ GQLG+G     PT  S  P      L     + ++  G  +  A+T +
Sbjct: 7   RSLVWAVGGNSKGQLGNG----TPTQSSFLPCRVAFQLAPTQRIAEVFCGYEHTFALTSD 62

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           G V  FG+G    LG G       P+ +     KG  VV+++AG EH +AL  SG
Sbjct: 63  GDVLGFGNGVKGQLGIGNTDSHSNPQRVHLLSGKG--VVKMAAGLEHSLALTESG 115


>gi|260832812|ref|XP_002611351.1| hypothetical protein BRAFLDRAFT_73256 [Branchiostoma floridae]
 gi|229296722|gb|EEN67361.1| hypothetical protein BRAFLDRAFT_73256 [Branchiostoma floridae]
          Length = 1152

 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/232 (29%), Positives = 107/232 (46%), Gaps = 15/232 (6%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G+++  L S   V+S G+   G LGHG +T  C    ++       V        H   +
Sbjct: 200 GKHYMALTSEGEVYSWGNGDGGRLGHG-DTNVCYKGQKV----LVIVYPYHPEGKHYMAL 254

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ----VTAGLNFTGFLTIR 234
              G+V++ G+      GH DTN     P LV  L G    +    +  G  ++  +T  
Sbjct: 255 TSEGEVYSWGNGDGGRLGHGDTNSR-EEPTLVRGLSGKQLGRHVVHIVCGSTYSAAITAD 313

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI--AAGPSYMLAVTGNGVVYS 292
           G + T G   +G+LGHG + D+ TP  +  L+    V+ I   +G +  LAVT +G V+S
Sbjct: 314 GELFTWGRGNYGRLGHGSSEDQLTPTLVVSLKGR-RVIDICCGSGDAQTLAVTDDGTVWS 372

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           +G G    LG G       P+ I   R +G  +VRV  G +  +AL  +G++
Sbjct: 373 WGDGDYGKLGRGGSDGCKTPKIID--RLQGQDIVRVCCGAQFSLALTKTGHI 422



 Score = 78.6 bits (192), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 65/235 (27%), Positives = 108/235 (45%), Gaps = 17/235 (7%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSAS 171
           G+++  L S   V+S G+   G LGHG       P   + +S  ++      HVV +   
Sbjct: 248 GKHYMALTSEGEVYSWGNGDGGRLGHGDTNSREEPTLVRGLSGKQL----GRHVVHIVCG 303

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             ++A +   G++FT G  +    GH  ++     P LV +LKG     +  G      L
Sbjct: 304 STYSAAITADGELFTWGRGNYGRLGH-GSSEDQLTPTLVVSLKGRRVIDICCGSGDAQTL 362

Query: 232 TI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
            +   G V + G   +G+LG G +    TPK I  L+    +V++  G  + LA+T  G 
Sbjct: 363 AVTDDGTVWSWGDGDYGKLGRGGSDGCKTPKIIDRLQGQ-DIVRVCCGAQFSLALTKTGH 421

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           ++++G G +  LGHG +     P+ ++  R  G  VV V+ G  H + +   G V
Sbjct: 422 IWTWGKGDSQRLGHGTEEHIRFPKQLEGLR--GKKVVDVAVGSMHCLVMTEEGEV 474



 Score = 52.0 bits (123), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 75/172 (43%), Gaps = 5/172 (2%)

Query: 118 TGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL +++  +V+S G    G LG G  +  C +   I+      +V+V      + 
Sbjct: 356 SGDAQTLAVTDDGTVWSWGDGDYGKLGRGG-SDGCKTPKIIDRLQGQDIVRVCCGAQFSL 414

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + ++G ++T G   S   GH  T   I  P+ +E L+G     V  G      +T  G 
Sbjct: 415 ALTKTGHIWTWGKGDSQRLGH-GTEEHIRFPKQLEGLRGKKVVDVAVGSMHCLVMTEEGE 473

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
           V+  G N  GQLG      +  P ++ PL+   S+  IA GP+     T  G
Sbjct: 474 VYGWGRNDQGQLGDSSFSTKSDP-TLMPLDGK-SISGIACGPAQSFCWTSTG 523


>gi|395501384|ref|XP_003755075.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Sarcophilus harrisii]
          Length = 1049

 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/226 (26%), Positives = 107/226 (47%), Gaps = 7/226 (3%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G ++    G   T   I  PR +++L  +   Q+  G   +  L+    V +
Sbjct: 101 DKGQVYAWGLDTDGQLGLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFS 160

Query: 240 CGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N HGQLG G  L R  +P+ I  L  +    Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKHGQLGLGFELKRQSSPQLIKSLLGI-PFTQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V
Sbjct: 220 GQLGLNDENDRFVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGV 263



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 71/206 (34%), Positives = 98/206 (47%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QI  G YH+L +S  S VFS G +  G LG G E  +  S   I         QV+A  
Sbjct: 140 VQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   F P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-FVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 67/213 (31%), Positives = 98/213 (46%), Gaps = 9/213 (4%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 253
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G +T GQLG   T
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGT 121

Query: 254 LDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
            +    P++I  L ++  +VQIA G  + LA++    V+S+G   +  LG G E   +  
Sbjct: 122 EEYIRVPRNIKSLTDI-QIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           P+ I++    GI   +V+AG  H   L  SG +
Sbjct: 181 PQLIKSLL--GIPFTQVAAGGAHSFVLTLSGAI 211



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 54/217 (24%), Positives = 98/217 (45%), Gaps = 7/217 (3%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P+  +SL D+   Q+   +     +S+  ++    + N + +  L F    + S  ++++
Sbjct: 128 PRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQ-NKHGQLGLGFELKRQSSPQLIKS 186

Query: 110 SAG--NMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV 166
             G    Q+  G  H+ +++ S ++F  G +  G LG   E  + V    +    +  +V
Sbjct: 187 LLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVP-NLLKSLRSQKIV 245

Query: 167 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
            +   E+H A + + G VFT G       GH  T+  I  PR V  L G    Q+  G  
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKVFELMGSIVTQIACGRQ 304

Query: 227 FT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
            T  F+   G +++ G   +GQLG G T +R +P ++
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341


>gi|405354387|ref|ZP_11023754.1| RCC1 repeat domain protein [Chondromyces apiculatus DSM 436]
 gi|397092349|gb|EJJ23118.1| RCC1 repeat domain protein [Myxococcus sp. (contaminant ex DSM
           436)]
          Length = 837

 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 63/202 (31%), Positives = 97/202 (48%), Gaps = 12/202 (5%)

Query: 121 YHTLLISNSSVFSCGSSLCGVLGH--GPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           +   L  + +V+S G++  G+LGH   P TTQ      +  P    V  ++A   HA  +
Sbjct: 601 FTVALREDGTVWSWGNNYFGMLGHPAWPSTTQGA----VQVPGLMDVTAIAAGNLHAVAL 656

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
            ++G V++ G NS+   G   TN     P  +  L  V  K +TAG +F   L   G V 
Sbjct: 657 RKNGSVWSWGRNSAGQLGD-GTNIQRDSPVPLRELANV--KAITAGRDFAVALHDDGTVW 713

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
             G+N  GQLG G    RP P+ +  L     VV + AG  + LA+  +G V+++G+   
Sbjct: 714 AWGANDSGQLGDGTFATRPLPQQVQGLT---GVVAVDAGDDHTLALRNDGTVWAWGNNDL 770

Query: 299 FCLGHGEQHDELQPRAIQTFRR 320
             LG G +  +  P  +Q FR+
Sbjct: 771 GQLGDGTRTTQPTPVQMQGFRK 792



 Score = 64.3 bits (155), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 74/285 (25%), Positives = 110/285 (38%), Gaps = 68/285 (23%)

Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           ++ G +H +L+  + S+ + GS    VLG G  TT       +  P  + V  V+A+  H
Sbjct: 490 VSVGSWHAVLLRQDGSLRTWGSGYSDVLGDG--TTYSKDAAPVQAPELSGVKAVAAAYEH 547

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG----LNFTGF 230
           +  V   G V++ G N     G   T RP   P  V  + G     V AG    L FT  
Sbjct: 548 SVAVRGDGTVWSWGLNQDDQLGD-GTFRPSSVPVQVLGITG--ATAVAAGGDTLLAFTVA 604

Query: 231 LTIRGHVHTCGSNTHGQLGH---------------------------------------- 250
           L   G V + G+N  G LGH                                        
Sbjct: 605 LREDGTVWSWGNNYFGMLGHPAWPSTTQGAVQVPGLMDVTAIAAGNLHAVALRKNGSVWS 664

Query: 251 -----------GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
                      G  + R +P    PL E+ +V  I AG  + +A+  +G V+++G+  + 
Sbjct: 665 WGRNSAGQLGDGTNIQRDSP---VPLRELANVKAITAGRDFAVALHDDGTVWAWGANDSG 721

Query: 300 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            LG G       P+ +Q        VV V AGD+H +AL + G V
Sbjct: 722 QLGDGTFATRPLPQQVQGL----TGVVAVDAGDDHTLALRNDGTV 762



 Score = 54.7 bits (130), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 53/188 (28%), Positives = 82/188 (43%), Gaps = 9/188 (4%)

Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
           +  P  A    +SA + H   +   G V+  G +     G+        +P   + L  V
Sbjct: 379 VQVPDLADCKALSAGDEHTVALRADGTVWVWGTDDFGQLGNGGVPSDA-KPVQAQGLMAV 437

Query: 217 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
             K V AG ++T  +   G V   GSN +GQLG G    R TP  +A L E G  V +  
Sbjct: 438 --KAVAAGNDWTVAIGEDGSVWAWGSNYYGQLGDGSRRSRSTPVRLAGLTE-GKTVSV-- 492

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
           G  + + +  +G + ++GSG +  LG G  + +     +Q     G+    V+A  EH V
Sbjct: 493 GSWHAVLLRQDGSLRTWGSGYSDVLGDGTTYSK-DAAPVQAPELSGVKA--VAAAYEHSV 549

Query: 337 ALDSSGYV 344
           A+   G V
Sbjct: 550 AVRGDGTV 557



 Score = 47.4 bits (111), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 53/223 (23%), Positives = 89/223 (39%), Gaps = 18/223 (8%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L  + S+++ GS+    LG   + +     T +  P       ++  ++H   +L+ G V
Sbjct: 205 LKEDGSIWTWGSNAASQLGA--DISAGSRVTPMQVPGLTGATAIAVGDSHTVALLKDGSV 262

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
           +T GDN S   G          P  V  L  V    + AG + T  +   G V T G+  
Sbjct: 263 WTWGDNRSGQLGDAGRESQNHIPAQVPGLASVVA--IAAGGSRTVAVRQDGTVWTWGTKQ 320

Query: 245 HGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG 304
             +         PTP  +  L +   V+   A  ++++ +  +G V+ +G  +   LG  
Sbjct: 321 SNRQDF-----NPTPVQVPGLTD---VIAADASDNHVVVLRTDGTVWGWGRAN--LLGGS 370

Query: 305 EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSLC 347
            Q     P  +            +SAGDEH VAL + G V + 
Sbjct: 371 TQDWLTMPVQVPDL----ADCKALSAGDEHTVALRADGTVWVW 409



 Score = 46.6 bits (109), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 81/202 (40%), Gaps = 33/202 (16%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ------- 167
           ++ G  HT+ L ++ +V+  G+   G LG+G              PS A  VQ       
Sbjct: 390 LSAGDEHTVALRADGTVWVWGTDDFGQLGNG------------GVPSDAKPVQAQGLMAV 437

Query: 168 --VSASENHAAFVLQSGQVFTCGDNSSFCCG---HRDTNRPIFRPRLVEALKGVPCKQVT 222
             V+A  +    + + G V+  G N     G    R  + P+    L E       K V+
Sbjct: 438 KAVAAGNDWTVAIGEDGSVWAWGSNYYGQLGDGSRRSRSTPVRLAGLTEG------KTVS 491

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
            G      L   G + T GS     LG G T  +      AP  E+  V  +AA   + +
Sbjct: 492 VGSWHAVLLRQDGSLRTWGSGYSDVLGDGTTYSKDAAPVQAP--ELSGVKAVAAAYEHSV 549

Query: 283 AVTGNGVVYSFGSGSNFCLGHG 304
           AV G+G V+S+G   +  LG G
Sbjct: 550 AVRGDGTVWSWGLNQDDQLGDG 571


>gi|326428031|gb|EGD73601.1| SNF2 family DNA-dependent ATPase [Salpingoeca sp. ATCC 50818]
          Length = 2192

 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 72/230 (31%), Positives = 103/230 (44%), Gaps = 10/230 (4%)

Query: 116  ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            +  G  HTL+  SN  + S G++ CG LG             +        + VS     
Sbjct: 1049 VACGAQHTLVAQSNGQMLSFGNNTCGALGRVCADDATAENPPMKMRLRRQFIYVSCGPRS 1108

Query: 175  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
            +  V  +G V++ GDN+    G       + RPR+V AL  V   Q+++    T FL   
Sbjct: 1109 SFAVTTNGTVYSWGDNTHRTLGIASRASSMARPRIVVALNCVHIVQISSNEFHTLFLDKH 1168

Query: 235  GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
            G V  CG   HGQLG       PTP+ I   E V  + Q++AG  + LA+  NG VY +G
Sbjct: 1169 GRVFVCGHGQHGQLGFRGRKKAPTPRPIPAFENV-VIKQVSAGRFHSLALATNGAVYVWG 1227

Query: 295  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
               +           +Q   + T R +G +VV+V AGD    AL S+G V
Sbjct: 1228 RPVSSA-------PVMQTPQLVT-RLRGRNVVKVVAGDSVSYALTSTGQV 1269



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 50/158 (31%), Positives = 73/158 (46%), Gaps = 16/158 (10%)

Query: 114  MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV--QVSA 170
            +QI++  +HTL +     VF CG    G LG      +  + T    P+  +VV  QVSA
Sbjct: 1153 VQISSNEFHTLFLDKHGRVFVCGHGQHGQLGF---RGRKKAPTPRPIPAFENVVIKQVSA 1209

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTG 229
               H+  +  +G V+  G   S        + P+ + P+LV  L+G    +V AG + + 
Sbjct: 1210 GRFHSLALATNGAVYVWGRPVS--------SAPVMQTPQLVTRLRGRNVVKVVAGDSVSY 1261

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE 267
             LT  G V   GS    +L   D  D PTPK + PL E
Sbjct: 1262 ALTSTGQVWAWGSPDIPELLCTDKADMPTPKQL-PLPE 1298


>gi|393912010|gb|EJD76548.1| hect domain and RLD 4, variant [Loa loa]
          Length = 1017

 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 75/272 (27%), Positives = 109/272 (40%), Gaps = 58/272 (21%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           + +G  HTL ++N   V+SCGS+  G LG G       +   ++  +A  ++Q+SA  +H
Sbjct: 52  VASGEKHTLFLANDGKVWSCGSNYNGELGRGGVKEGSYTIYPVHISNAVRIIQISAGRSH 111

Query: 175 AAFVLQSGQVFTCGDNS------------------------------------------- 191
           +  V   G++F  G NS                                           
Sbjct: 112 SMAVSDDGRLFAWGSNSHGQLAMSGDILISDTPKRVPSLPETVQVACGASHTVSLNGGGR 171

Query: 192 SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG 251
            F  G +   R    P  VE    VP  Q++AG  FT  LT  G +   G N  GQLG+ 
Sbjct: 172 VFIWGQQSDGRIRHSPAEVELFVSVPIIQISAGNLFTMALTASGTLFAWGRNEEGQLGNF 231

Query: 252 DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ 311
              D   P+ +     + SVV +  G S+ +A+T  G V+S GS S   LG G      Q
Sbjct: 232 TNRDVINPREVP---NINSVVVVECGDSHSIALTHEGRVFSCGSDSFGQLGCG------Q 282

Query: 312 PRAIQTFRRK-----GIHVVRVSAGDEHVVAL 338
           P   Q   R      G HV R++ G  H + +
Sbjct: 283 PSRSQNCMRGITEMLGSHVTRIACGRCHTIVV 314



 Score = 74.3 bits (181), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 64/222 (28%), Positives = 103/222 (46%), Gaps = 24/222 (10%)

Query: 131 VFSCGSSLCGVLGHGPETT----QCVSFTRINF--PSAAHVVQVSA---SENHAAFVLQS 181
           VF C S   G L   P +     Q + F  + +  P+  H V V A    E H  F+   
Sbjct: 8   VFGCASD--GQLAFRPNSAGNDAQMMLFPHLVYGAPTGQHGVTVKAVASGEKHTLFLAND 65

Query: 182 GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 241
           G+V++CG N +   G        +    V     V   Q++AG + +  ++  G +   G
Sbjct: 66  GKVWSCGSNYNGELGRGGVKEGSYTIYPVHISNAVRIIQISAGRSHSMAVSDDGRLFAWG 125

Query: 242 SNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
           SN+HGQL   GD L   TPK +  L E    VQ+A G S+ +++ G G V+ +G  S+  
Sbjct: 126 SNSHGQLAMSGDILISDTPKRVPSLPE---TVQVACGASHTVSLNGGGRVFIWGQQSDGR 182

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           + H        P  ++ F    + ++++SAG+   +AL +SG
Sbjct: 183 IRHS-------PAEVELF--VSVPIIQISAGNLFTMALTASG 215



 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 54/177 (30%), Positives = 89/177 (50%), Gaps = 11/177 (6%)

Query: 100 VEHSSDIVE--TSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTR 156
           + HS   VE   S   +QI+ G   T+ L ++ ++F+ G +  G LG+   T + V   R
Sbjct: 183 IRHSPAEVELFVSVPIIQISAGNLFTMALTASGTLFAWGRNEEGQLGNF--TNRDVINPR 240

Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALK 214
              P+   VV V   ++H+  +   G+VF+CG +S     CG    ++   R   +  + 
Sbjct: 241 -EVPNINSVVVVECGDSHSIALTHEGRVFSCGSDSFGQLGCGQPSRSQNCMRG--ITEML 297

Query: 215 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV 271
           G    ++  G   T  +   G +HT G N++GQLGHG+T ++ TP+ I  +E V SV
Sbjct: 298 GSHVTRIACGRCHT-IVVANGKMHTFGLNSNGQLGHGNTRNQITPRMIDSVENVASV 353



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 42/133 (31%), Positives = 69/133 (51%), Gaps = 9/133 (6%)

Query: 215 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP--LEEVGSVV 272
           GV  K V +G   T FL   G V +CGSN +G+LG G    +    +I P  +     ++
Sbjct: 46  GVTVKAVASGEKHTLFLANDGKVWSCGSNYNGELGRGGV--KEGSYTIYPVHISNAVRII 103

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKGIHVVRVSAG 331
           QI+AG S+ +AV+ +G ++++GS S+  L   G+      P+ + +        V+V+ G
Sbjct: 104 QISAGRSHSMAVSDDGRLFAWGSNSHGQLAMSGDILISDTPKRVPSLP----ETVQVACG 159

Query: 332 DEHVVALDSSGYV 344
             H V+L+  G V
Sbjct: 160 ASHTVSLNGGGRV 172


>gi|393912009|gb|EJD76547.1| hect domain and RLD 4 [Loa loa]
          Length = 1043

 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 75/272 (27%), Positives = 109/272 (40%), Gaps = 58/272 (21%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           + +G  HTL ++N   V+SCGS+  G LG G       +   ++  +A  ++Q+SA  +H
Sbjct: 52  VASGEKHTLFLANDGKVWSCGSNYNGELGRGGVKEGSYTIYPVHISNAVRIIQISAGRSH 111

Query: 175 AAFVLQSGQVFTCGDNSS------------------------------------------ 192
           +  V   G++F  G NS                                           
Sbjct: 112 SMAVSDDGRLFAWGSNSHGQLAMSGDILISDTPKRVPSLPETVQVACGASHTVSLNGGGR 171

Query: 193 -FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG 251
            F  G +   R    P  VE    VP  Q++AG  FT  LT  G +   G N  GQLG+ 
Sbjct: 172 VFIWGQQSDGRIRHSPAEVELFVSVPIIQISAGNLFTMALTASGTLFAWGRNEEGQLGNF 231

Query: 252 DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ 311
              D   P+ +     + SVV +  G S+ +A+T  G V+S GS S   LG G      Q
Sbjct: 232 TNRDVINPREVP---NINSVVVVECGDSHSIALTHEGRVFSCGSDSFGQLGCG------Q 282

Query: 312 PRAIQTFRRK-----GIHVVRVSAGDEHVVAL 338
           P   Q   R      G HV R++ G  H + +
Sbjct: 283 PSRSQNCMRGITEMLGSHVTRIACGRCHTIVV 314



 Score = 73.9 bits (180), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 64/222 (28%), Positives = 103/222 (46%), Gaps = 24/222 (10%)

Query: 131 VFSCGSSLCGVLGHGPETT----QCVSFTRINF--PSAAHVVQVSA---SENHAAFVLQS 181
           VF C S   G L   P +     Q + F  + +  P+  H V V A    E H  F+   
Sbjct: 8   VFGCASD--GQLAFRPNSAGNDAQMMLFPHLVYGAPTGQHGVTVKAVASGEKHTLFLAND 65

Query: 182 GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 241
           G+V++CG N +   G        +    V     V   Q++AG + +  ++  G +   G
Sbjct: 66  GKVWSCGSNYNGELGRGGVKEGSYTIYPVHISNAVRIIQISAGRSHSMAVSDDGRLFAWG 125

Query: 242 SNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
           SN+HGQL   GD L   TPK +  L E    VQ+A G S+ +++ G G V+ +G  S+  
Sbjct: 126 SNSHGQLAMSGDILISDTPKRVPSLPE---TVQVACGASHTVSLNGGGRVFIWGQQSDGR 182

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           + H        P  ++ F    + ++++SAG+   +AL +SG
Sbjct: 183 IRHS-------PAEVELF--VSVPIIQISAGNLFTMALTASG 215



 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 54/177 (30%), Positives = 89/177 (50%), Gaps = 11/177 (6%)

Query: 100 VEHSSDIVE--TSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTR 156
           + HS   VE   S   +QI+ G   T+ L ++ ++F+ G +  G LG+   T + V   R
Sbjct: 183 IRHSPAEVELFVSVPIIQISAGNLFTMALTASGTLFAWGRNEEGQLGNF--TNRDVINPR 240

Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALK 214
              P+   VV V   ++H+  +   G+VF+CG +S     CG    ++   R   +  + 
Sbjct: 241 -EVPNINSVVVVECGDSHSIALTHEGRVFSCGSDSFGQLGCGQPSRSQNCMRG--ITEML 297

Query: 215 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV 271
           G    ++  G   T  +   G +HT G N++GQLGHG+T ++ TP+ I  +E V SV
Sbjct: 298 GSHVTRIACGRCHT-IVVANGKMHTFGLNSNGQLGHGNTRNQITPRMIDSVENVASV 353



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 42/133 (31%), Positives = 69/133 (51%), Gaps = 9/133 (6%)

Query: 215 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP--LEEVGSVV 272
           GV  K V +G   T FL   G V +CGSN +G+LG G    +    +I P  +     ++
Sbjct: 46  GVTVKAVASGEKHTLFLANDGKVWSCGSNYNGELGRGGV--KEGSYTIYPVHISNAVRII 103

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKGIHVVRVSAG 331
           QI+AG S+ +AV+ +G ++++GS S+  L   G+      P+ + +        V+V+ G
Sbjct: 104 QISAGRSHSMAVSDDGRLFAWGSNSHGQLAMSGDILISDTPKRVPSLP----ETVQVACG 159

Query: 332 DEHVVALDSSGYV 344
             H V+L+  G V
Sbjct: 160 ASHTVSLNGGGRV 172


>gi|195434691|ref|XP_002065336.1| GK14718 [Drosophila willistoni]
 gi|194161421|gb|EDW76322.1| GK14718 [Drosophila willistoni]
          Length = 486

 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 63/226 (27%), Positives = 102/226 (45%), Gaps = 27/226 (11%)

Query: 122 HTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           H+++I+ +      G +  G LG   +       T I      +VVQ +   +H  F+  
Sbjct: 126 HSIIINMDRKALGFGRNPSGQLGLSQDIKLVEKPTLIPALEQLNVVQAACGRHHTLFLTD 185

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           +G V+ CG+N S  CG  +T+  I+ P  +   +G P  +V  G  F+  L I+G++HT 
Sbjct: 186 TGTVYACGENKSGQCGVGNTHANIYSPTPIN-YRGPPIIRVGCGAEFSVILDIKGNLHTF 244

Query: 241 GSNTHGQLGHGDTLD------------RPTPKSI------------APLEEVGSVVQIAA 276
           G   +GQLGH                   +PK +             P++ V  +V  A 
Sbjct: 245 GLPEYGQLGHNTDAKYFVNANKLSFHFETSPKKVVLYIEKSKEGHVTPVDGV-QIVDFAC 303

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           G ++ +A+     VYS+G G    LGH E  DE+ PR ++ F  +G
Sbjct: 304 GNNHTVAIDSKKRVYSWGFGGFGRLGHAEPKDEMVPRLMKFFDAQG 349



 Score = 55.1 bits (131), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 87/212 (41%), Gaps = 43/212 (20%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 219
           P+AAH + ++       F          G N S   G     + + +P L+ AL+ +   
Sbjct: 122 PAAAHSIIINMDRKALGF----------GRNPSGQLGLSQDIKLVEKPTLIPALEQLNVV 171

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT---LDRPTPKSI--APLEEVGSVVQI 274
           Q   G + T FLT  G V+ CG N  GQ G G+T   +  PTP +    P+  VG   + 
Sbjct: 172 QAACGRHHTLFLTDTGTVYACGENKSGQCGVGNTHANIYSPTPINYRGPPIIRVGCGAEF 231

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ------------HDELQPRAIQTFRRK- 321
               S +L + GN  +++FG      LGH               H E  P+ +  +  K 
Sbjct: 232 ----SVILDIKGN--LHTFGLPEYGQLGHNTDAKYFVNANKLSFHFETSPKKVVLYIEKS 285

Query: 322 ---------GIHVVRVSAGDEHVVALDSSGYV 344
                    G+ +V  + G+ H VA+DS   V
Sbjct: 286 KEGHVTPVDGVQIVDFACGNNHTVAIDSKKRV 317


>gi|142942429|gb|ABO93003.1| putative regulator of chromosome condensation RCC1 [Solanum
           tuberosum]
          Length = 951

 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/242 (28%), Positives = 112/242 (46%), Gaps = 29/242 (11%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           ++ G +HT LI+++  +F+ G    G LGHG + + C++   +   +    ++V+    H
Sbjct: 420 VSCGPWHTALITSAGRLFTFGDGTFGALGHG-DRSGCITPREVETFNGLKTLKVACGVWH 478

Query: 175 AAFVLQ-------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
            A V++             SG +FT GD      GH D N+P   P+ + AL      +V
Sbjct: 479 TAAVVELMSGLDSRPSDAPSGTLFTWGDGDKGKLGHGD-NKPRLAPQCITALVDKSFSEV 537

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEV---GSVVQIAA 276
                 T  LT  G V+T GSN +GQLG       P    ++P+  E+     +V +I+ 
Sbjct: 538 ACSYAMTVALTTTGRVYTMGSNVYGQLGC------PLANGMSPICVEDYLVDSTVEEISC 591

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
           G  ++  +T    VY++G G N  LGHG+  ++  P  +   R K   V R+  G     
Sbjct: 592 GSHHVAVLTSRTEVYTWGKGENGQLGHGDCENKCTPTLVDILRDK--QVKRIVCGSNFSA 649

Query: 337 AL 338
           A+
Sbjct: 650 AI 651



 Score = 75.5 bits (184), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 48/176 (27%), Positives = 86/176 (48%), Gaps = 5/176 (2%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  +S    HA  V + G+ F+ G+ +    GH      +  P+L++  KG+  + +  G
Sbjct: 310 VQNISCGNRHAMLVTKQGEAFSWGEEAGGRLGH-GAETDVSHPKLIKNFKGMNVELIACG 368

Query: 225 LNFTGFLTIRGHVHTCG--SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
              +  +T  G ++T G  + + G LGH        PK +  L E   V  ++ GP +  
Sbjct: 369 EYHSCAVTSSGDLYTWGDGAKSSGLLGHRSEASHWIPKKVCGLMEGLRVSHVSCGPWHTA 428

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            +T  G +++FG G+   LGHG++   + PR ++TF   G+  ++V+ G  H  A+
Sbjct: 429 LITSAGRLFTFGDGTFGALGHGDRSGCITPREVETF--NGLKTLKVACGVWHTAAV 482



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 84/196 (42%), Gaps = 18/196 (9%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           I  G YH+  +++S     +  G+   G+LGH  E +  +            V  VS   
Sbjct: 365 IACGEYHSCAVTSSGDLYTWGDGAKSSGLLGHRSEASHWIPKKVCGLMEGLRVSHVSCGP 424

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL- 231
            H A +  +G++FT GD +    GH D +  I  PR VE   G+   +V  G+  T  + 
Sbjct: 425 WHTALITSAGRLFTFGDGTFGALGHGDRSGCI-TPREVETFNGLKTLKVACGVWHTAAVV 483

Query: 232 ------------TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
                          G + T G    G+LGHGD   R  P+ I  L +  S  ++A   +
Sbjct: 484 ELMSGLDSRPSDAPSGTLFTWGDGDKGKLGHGDNKPRLAPQCITALVD-KSFSEVACSYA 542

Query: 280 YMLAVTGNGVVYSFGS 295
             +A+T  G VY+ GS
Sbjct: 543 MTVALTTTGRVYTMGS 558



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 3/92 (3%)

Query: 251 GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL 310
           G  +D  TPKS+     V  V  I+ G  + + VT  G  +S+G  +   LGHG + D  
Sbjct: 291 GTRIDANTPKSLES-SVVLDVQNISCGNRHAMLVTKQGEAFSWGEEAGGRLGHGAETDVS 349

Query: 311 QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            P+ I+ F  KG++V  ++ G+ H  A+ SSG
Sbjct: 350 HPKLIKNF--KGMNVELIACGEYHSCAVTSSG 379


>gi|357126800|ref|XP_003565075.1| PREDICTED: uncharacterized protein LOC100834588 [Brachypodium
           distachyon]
          Length = 1092

 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/192 (30%), Positives = 97/192 (50%), Gaps = 7/192 (3%)

Query: 150 QCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRL 209
            C+    + F     V  +S    HAA V + G++++ G+ S    GH   +  +  P+L
Sbjct: 300 DCLVPKPLEFAVRLDVQNISCGGKHAALVSKQGEIYSWGEESGGRLGH-GVDCDVAHPKL 358

Query: 210 VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLE 266
           ++AL  +  + V  G   T  +T+ G ++T G  T   G LGHG+ +    PK +  PLE
Sbjct: 359 IDALTHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDISHWVPKKLHGPLE 418

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
            +  V  I+ GP + + VT  G +++FG GS   LGHG++     P+ +++   KG+  V
Sbjct: 419 GI-HVSSISCGPFHTVIVTSAGQLFTFGDGSFGVLGHGDRESLSVPKEVESL--KGLRTV 475

Query: 327 RVSAGDEHVVAL 338
           R + G  H  A+
Sbjct: 476 RAACGVWHTAAV 487



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/229 (28%), Positives = 102/229 (44%), Gaps = 26/229 (11%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I+ G +HT++++++  +F+ G    GVLGHG   +  V    +        V+ +    H
Sbjct: 425 ISCGPFHTVIVTSAGQLFTFGDGSFGVLGHGDRESLSVP-KEVESLKGLRTVRAACGVWH 483

Query: 175 AAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            A V++            SG++FT GD      GH D    +  P  V AL      QV 
Sbjct: 484 TAAVVEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKESRLV-PTCVAALVEPNFCQVA 542

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAG 277
            G   T  LT  GHV+T GS  +GQLG+      P    + P    G      V +I+ G
Sbjct: 543 CGHCLTVALTTSGHVYTMGSAVYGQLGN------PQADGMLPARVEGKLHKNFVEEISCG 596

Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
             ++  +T    VY++G G+N  LGHG   D+  P  ++  + K +  V
Sbjct: 597 AYHVAVLTSRTEVYTWGKGANGRLGHGNTDDKNTPTLVEALKDKQVRNV 645



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 70/138 (50%), Gaps = 4/138 (2%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E    +  + ++ G      ++ +G +++ G  + G+LGHG   D   PK I  L 
Sbjct: 304 PKPLEFAVRLDVQNISCGGKHAALVSKQGEIYSWGEESGGRLGHGVDCDVAHPKLIDALT 363

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPRAIQTFRRKGIH 324
            + ++  +A G  +  AVT +G +Y++G G+  F  LGHG       P+ +     +GIH
Sbjct: 364 HM-NIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDISHWVPKKLHG-PLEGIH 421

Query: 325 VVRVSAGDEHVVALDSSG 342
           V  +S G  H V + S+G
Sbjct: 422 VSSISCGPFHTVIVTSAG 439



 Score = 47.0 bits (110), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 49/193 (25%), Positives = 85/193 (44%), Gaps = 10/193 (5%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQC 151
           R +R    V H++ +VE  AGN   +         S+  +F+ G    G LGHG + ++ 
Sbjct: 473 RTVRAACGVWHTAAVVEVMAGNSSSSN-------CSSGKIFTWGDGDKGRLGHGDKESRL 525

Query: 152 VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE 211
           V  T +      +  QV+        +  SG V+T G       G+   +  +   R+  
Sbjct: 526 VP-TCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGNPQAD-GMLPARVEG 583

Query: 212 ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV 271
            L     ++++ G      LT R  V+T G   +G+LGHG+T D+ TP  +  L++   V
Sbjct: 584 KLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGNTDDKNTPTLVEALKD-KQV 642

Query: 272 VQIAAGPSYMLAV 284
             +  G ++  A+
Sbjct: 643 RNVVCGTNFTAAI 655



 Score = 38.9 bits (89), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 56/120 (46%), Gaps = 3/120 (2%)

Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+  G   T+ ++ S  V++ GS++ G LG+ P+    +            V ++S    
Sbjct: 540 QVACGHCLTVALTTSGHVYTMGSAVYGQLGN-PQADGMLPARVEGKLHKNFVEEISCGAY 598

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H A +    +V+T G  ++   GH +T+     P LVEALK    + V  G NFT  + I
Sbjct: 599 HVAVLTSRTEVYTWGKGANGRLGHGNTDDK-NTPTLVEALKDKQVRNVVCGTNFTAAICI 657


>gi|444729790|gb|ELW70194.1| putative E3 ubiquitin-protein ligase HERC6 [Tupaia chinensis]
          Length = 1378

 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/226 (30%), Positives = 108/226 (47%), Gaps = 10/226 (4%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           ++ G+ H+L + +   VF+ G+   G LG G    +  +  +I   +   ++QVS    H
Sbjct: 102 VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKERSFTPQKIKALAGIKIIQVSCGYYH 161

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           +  + + GQVF+ G NS    G          P+ V +L+G+P  QV AG   +  L++ 
Sbjct: 162 SLALSEDGQVFSWGKNSHGQLGLGKEVPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLS 221

Query: 235 GHVHTCGSNTHGQL---GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           G     GSN+ GQL   G    + R  P S+  L+ +G VV I+ G  +   +T NG VY
Sbjct: 222 GTSFGWGSNSAGQLALSGTKAPVQRYKPLSVGALKTLG-VVYISCGSEHTAVLTQNGAVY 280

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           +FG+ S+  LGH  +      R  Q   R    V ++  G  H +A
Sbjct: 281 TFGANSSGQLGHSAEQ-----RGPQCVERIDGLVSQIDCGSYHTLA 321



 Score = 75.1 bits (183), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 52/158 (32%), Positives = 83/158 (52%), Gaps = 7/158 (4%)

Query: 182  GQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
            G++F  G NS      G    + P   P++VE L GVP  Q++AG   +  L++ G+V++
Sbjct: 913  GELFAWGQNSHGQLGLGRIFPSSPT--PQIVEHLAGVPLVQISAGEAHSMALSMTGNVYS 970

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G N  GQLG G T  + +P  +  L+    V  +A G S+   +T +G+V++FG+G   
Sbjct: 971  WGKNDFGQLGLGHTESKDSPSLLRALDS-QKVDFLACGGSHTALLTQDGLVFTFGAGKYG 1029

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             LGH    DEL+P  +      G  V +++ G  H +A
Sbjct: 1030 QLGHSSTRDELRPCLVTELL--GNRVTQIACGRWHTLA 1065



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 63/187 (33%), Positives = 93/187 (49%), Gaps = 8/187 (4%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++ G YH+L +S +  VFS G +  G LG G E     S  R+       + QV+A  
Sbjct: 153 IQVSCGYYHSLALSEDGQVFSWGKNSHGQLGLGKEVPSQTSPQRVRSLEGIPLAQVAAGG 212

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPI--FRPRLVEALKGVPCKQVTAGLNFTGF 230
            H+  +  SG  F  G NS+       T  P+  ++P  V ALK +    ++ G   T  
Sbjct: 213 AHSFALSLSGTSFGWGSNSAGQLALSGTKAPVQRYKPLSVGALKTLGVVYISCGSEHTAV 272

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA-VTGNGV 289
           LT  G V+T G+N+ GQLGH  + ++  P+ +  ++  G V QI  G  + LA V   G 
Sbjct: 273 LTQNGAVYTFGANSSGQLGH--SAEQRGPQCVERID--GLVSQIDCGSYHTLAYVYTTGQ 328

Query: 290 VYSFGSG 296
           V SFG G
Sbjct: 329 VVSFGHG 335



 Score = 70.9 bits (172), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 59/203 (29%), Positives = 93/203 (45%), Gaps = 15/203 (7%)

Query: 146 PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF 205
           PE  Q     R++         VS  + H+  V   G+VF  G  S    G  +     F
Sbjct: 88  PEQIQAFETLRVDL--------VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKERSF 139

Query: 206 RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAP 264
            P+ ++AL G+   QV+ G   +  L+  G V + G N+HGQLG G  +   T P+ +  
Sbjct: 140 TPQKIKALAGIKIIQVSCGYYHSLALSEDGQVFSWGKNSHGQLGLGKEVPSQTSPQRVRS 199

Query: 265 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL---GHGEQHDELQPRAIQTFRRK 321
           LE +  + Q+AAG ++  A++ +G  + +GS S   L   G        +P ++   +  
Sbjct: 200 LEGI-PLAQVAAGGAHSFALSLSGTSFGWGSNSAGQLALSGTKAPVQRYKPLSVGALKTL 258

Query: 322 GIHVVRVSAGDEHVVALDSSGYV 344
           G  VV +S G EH   L  +G V
Sbjct: 259 G--VVYISCGSEHTAVLTQNGAV 279



 Score = 70.9 bits (172), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 67/216 (31%), Positives = 98/216 (45%), Gaps = 27/216 (12%)

Query: 121  YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA-----------AHVVQVS 169
            +H L +     F CG     +   G  +   +   RI FPS+             +VQ+S
Sbjct: 899  FHKLKLDEKKKFLCGE----LFAWGQNSHGQLGLGRI-FPSSPTPQIVEHLAGVPLVQIS 953

Query: 170  ASENHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
            A E H+  +  +G V++ G N       GH ++      P L+ AL       +  G + 
Sbjct: 954  AGEAHSMALSMTGNVYSWGKNDFGQLGLGHTESKD---SPSLLRALDSQKVDFLACGGSH 1010

Query: 228  TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VT 285
            T  LT  G V T G+  +GQLGH  T D   P  +  L  +G+ V QIA G  + LA V+
Sbjct: 1011 TALLTQDGLVFTFGAGKYGQLGHSSTRDELRPCLVTEL--LGNRVTQIACGRWHTLAYVS 1068

Query: 286  GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 321
              G V++FGSG N  LG+   H+  QP +    RR+
Sbjct: 1069 ELGKVFAFGSGKNGQLGNCGTHN--QPNSYVNLRRR 1102


>gi|327273047|ref|XP_003221294.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like [Anolis
           carolinensis]
          Length = 1081

 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 60/189 (31%), Positives = 96/189 (50%), Gaps = 7/189 (3%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHR---DTNRPIFRPRLVEALKGV 216
           P+   VV V+  E H   +   G V +CGDNS    G R      +  + P L++AL+  
Sbjct: 34  PADQAVVLVACGERHTLLLRDDGGVASCGDNSRGQLGRRLPSGQEKRSYGPELIQALETQ 93

Query: 217 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
               V+ G   +  +  +G V++ G+ T GQLG G+  DR  PK+I  L +   V+Q+A 
Sbjct: 94  KVVHVSCGKEHSLAVCNKGRVYSWGAGTFGQLGTGELGDRLIPKTINALSKY-KVIQVAC 152

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + +A+T +G ++S+G   +  LG G+    +  P+ +      GI + +V+AG  H 
Sbjct: 153 GHDHSIALTNDGRIFSWGQNIHGQLGLGKDISSQASPQQVSAL--DGIPLAQVAAGGAHS 210

Query: 336 VALDSSGYV 344
            AL  SG V
Sbjct: 211 FALSLSGVV 219



 Score = 79.0 bits (193), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 71/245 (28%), Positives = 113/245 (46%), Gaps = 28/245 (11%)

Query: 116 ITTGRYHTLLISNSS-VFSCGSSLCGVLG-----------HGPETTQCVSFTRINFPSAA 163
           +  G  HTLL+ +   V SCG +  G LG           +GPE  Q +   +       
Sbjct: 42  VACGERHTLLLRDDGGVASCGDNSRGQLGRRLPSGQEKRSYGPELIQALETQK------- 94

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
            VV VS  + H+  V   G+V++ G  +    G  +    +  P+ + AL      QV  
Sbjct: 95  -VVHVSCGKEHSLAVCNKGRVYSWGAGTFGQLGTGELGDRLI-PKTINALSKYKVIQVAC 152

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
           G + +  LT  G + + G N HGQLG G D   + +P+ ++ L+ +  + Q+AAG ++  
Sbjct: 153 GHDHSIALTNDGRIFSWGQNIHGQLGLGKDISSQASPQQVSALDGI-PLAQVAAGGAHSF 211

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQ---PRAIQTFRRKGIHVVRVSAGDEHVVALD 339
           A++ +GVVY +G  +   LG  +   + Q   P +I   R   + V  VS G EH   L 
Sbjct: 212 ALSLSGVVYGWGRNNAHQLGLSQAKPKEQIFKPYSIAALR--SLDVAFVSCGAEHTAVLT 269

Query: 340 SSGYV 344
            +G V
Sbjct: 270 QNGSV 274



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 59/193 (30%), Positives = 90/193 (46%), Gaps = 6/193 (3%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + ++ G+ H+L + N   V+S G+   G LG G    + +  T IN  S   V+QV+   
Sbjct: 96  VHVSCGKEHSLAVCNKGRVYSWGAGTFGQLGTGELGDRLIPKT-INALSKYKVIQVACGH 154

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           +H+  +   G++F+ G N     G          P+ V AL G+P  QV AG   +  L+
Sbjct: 155 DHSIALTNDGRIFSWGQNIHGQLGLGKDISSQASPQQVSALDGIPLAQVAAGGAHSFALS 214

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRP---TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
           + G V+  G N   QLG      +     P SIA L  +  V  ++ G  +   +T NG 
Sbjct: 215 LSGVVYGWGRNNAHQLGLSQAKPKEQIFKPYSIAALRSL-DVAFVSCGAEHTAVLTQNGS 273

Query: 290 VYSFGSGSNFCLG 302
           VY+FG  S   LG
Sbjct: 274 VYTFGDDSAGQLG 286



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/189 (27%), Positives = 92/189 (48%), Gaps = 9/189 (4%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G  H++ ++N   +FS G ++ G LG G + +   S  +++      + QV+A  
Sbjct: 148 IQVACGHDHSIALTNDGRIFSWGQNIHGQLGLGKDISSQASPQQVSALDGIPLAQVAAGG 207

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCG--HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            H+  +  SG V+  G N++   G         IF+P  + AL+ +    V+ G   T  
Sbjct: 208 AHSFALSLSGVVYGWGRNNAHQLGLSQAKPKEQIFKPYSIAALRSLDVAFVSCGAEHTAV 267

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPK-SIAPLEEVGSVVQIAAGPSY--MLAVTGN 287
           LT  G V+T G ++ GQLG   +    +PK     +E +   V + A  SY  ++ ++ +
Sbjct: 268 LTQNGSVYTFGDDSAGQLGRNSS---SSPKFGPQKVEWIDGPVSLLACGSYHTLVRISTS 324

Query: 288 GVVYSFGSG 296
           G + SFG G
Sbjct: 325 GQLLSFGRG 333


>gi|449522147|ref|XP_004168089.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like, partial
           [Cucumis sativus]
          Length = 302

 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/213 (30%), Positives = 98/213 (46%), Gaps = 14/213 (6%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HT  ++ +  +F  G    G LG G    + V   +++      +V V+    H
Sbjct: 34  VAAGAEHTAAVTEDGELFGWGWGRYGNLGLGDRNDRLVP-QKVSSVDGDKMVMVACGWRH 92

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV----EALKGVPCKQVTAGLNFTGF 230
              V   G ++T G +     GH D     F  RLV    EAL+G    Q++ G   T  
Sbjct: 93  TISVSSLGGLYTYGWSKYGQLGHGD-----FEDRLVPHRLEALRGDNISQISGGWRHTMA 147

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGV 289
           LT  G ++  G N  GQ+G GD +D  +P  I  P ++   V+QI+ G  + LAVT    
Sbjct: 148 LTTDGKLYGWGWNKFGQVGAGDNIDHCSPIQIKFPQDQ--KVIQISCGWRHTLAVTDKQN 205

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           V+S+G G+N  LGHGE  D   P  ++     G
Sbjct: 206 VFSWGRGTNGQLGHGESVDRNTPMILEALSVDG 238



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 72/136 (52%), Gaps = 3/136 (2%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ ++A +G+  K V AG   T  +T  G +   G   +G LG GD  DR  P+ ++ ++
Sbjct: 20  PQKIQAFEGISIKMVAAGAEHTAAVTEDGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVD 79

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
               +V +A G  + ++V+  G +Y++G      LGHG+  D L P  ++  R  G ++ 
Sbjct: 80  G-DKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGDFEDRLVPHRLEALR--GDNIS 136

Query: 327 RVSAGDEHVVALDSSG 342
           ++S G  H +AL + G
Sbjct: 137 QISGGWRHTMALTTDG 152



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 56/103 (54%), Gaps = 3/103 (2%)

Query: 240 CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
            G N +GQLG G T D   P+ I   E + S+  +AAG  +  AVT +G ++ +G G   
Sbjct: 1   WGRNQNGQLGLGTTEDSLVPQKIQAFEGI-SIKMVAAGAEHTAAVTEDGELFGWGWGRYG 59

Query: 300 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            LG G+++D L P+ + +    G  +V V+ G  H +++ S G
Sbjct: 60  NLGLGDRNDRLVPQKVSSV--DGDKMVMVACGWRHTISVSSLG 100


>gi|334187769|ref|NP_001190338.1| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
 gi|332005321|gb|AED92704.1| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
          Length = 1139

 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 87/175 (49%), Gaps = 5/175 (2%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHR-DTNRPIFRPRLVEALKGVPCKQVTA 223
           V  ++    HA  V + G+ F+ G+ S    GH  D+N  +  P+L++AL     + V  
Sbjct: 348 VQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSN--VQHPKLIDALNTTNIELVAC 405

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G   +  +T+ G ++T G    G LGHG+ +    PK +  L E   V  IA GP +   
Sbjct: 406 GEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAV 465

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           VT  G +++FG G+   LGHG++     PR + +   KG+  VR + G  H  A+
Sbjct: 466 VTSAGQLFTFGDGTFGVLGHGDRKSVFIPREVDSL--KGLRTVRAACGVWHTAAV 518



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 74/257 (28%), Positives = 118/257 (45%), Gaps = 20/257 (7%)

Query: 99  SVEHSSDIVETSAGNMQITT-GRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR 156
           +V+H   I   +  N+++   G YH+  ++ S  +++ G    G+LGHG E +  V   R
Sbjct: 385 NVQHPKLIDALNTTNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVP-KR 443

Query: 157 INF-PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           +NF     HV  ++    H A V  +GQ+FT GD +    GH D  + +F PR V++LKG
Sbjct: 444 VNFLMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGD-RKSVFIPREVDSLKG 502

Query: 216 VPCKQVTAGLNFTGFLT------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +   +   G+  T  +               G + T G     +LGHGD   +  P  +A
Sbjct: 503 LRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVPTCVA 562

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 323
            L E  +  Q+A G S  +A+T +G VY+ GS     LG+     ++  R      +   
Sbjct: 563 ALVEP-NFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNPHADGKVPTRVDGKLHKS-- 619

Query: 324 HVVRVSAGDEHVVALDS 340
            V  ++ G  HV  L S
Sbjct: 620 FVEEIACGAYHVAVLTS 636



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 67/224 (29%), Positives = 102/224 (45%), Gaps = 16/224 (7%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G YHT +++++  +F+ G    GVLGHG   +  +    ++       V+ +    H
Sbjct: 456 IACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVFIP-REVDSLKGLRTVRAACGVWH 514

Query: 175 AAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            A V++            SG++FT GD      GH D   P   P  V AL      QV 
Sbjct: 515 TAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGD-KEPKLVPTCVAALVEPNFCQVA 573

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
            G + T  LT  GHV+T GS  +GQLG+    D   P  +        V +IA G  ++ 
Sbjct: 574 CGHSLTVALTTSGHVYTMGSPVYGQLGNPHA-DGKVPTRVDGKLHKSFVEEIACGAYHVA 632

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
            +T    VY++G GSN  LGHG+  D   P  +++ + K +  +
Sbjct: 633 VLTSRTEVYTWGKGSNGRLGHGDADDRNSPTLVESLKDKQVKSI 676



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 66/136 (48%), Gaps = 2/136 (1%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E+   +  + +  G      +T +G   + G  + G+LGHG   +   PK I  L 
Sbjct: 337 PKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLIDALN 396

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
              ++  +A G  +  AVT +G +Y++G G    LGHG +     P+ +  F  +GIHV 
Sbjct: 397 TT-NIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVN-FLMEGIHVS 454

Query: 327 RVSAGDEHVVALDSSG 342
            ++ G  H   + S+G
Sbjct: 455 SIACGPYHTAVVTSAG 470


>gi|440796277|gb|ELR17386.1| regulator of chromosome condensation (RCC1) repeat domain containing
            protein [Acanthamoeba castellanii str. Neff]
          Length = 1595

 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 60/183 (32%), Positives = 91/183 (49%), Gaps = 8/183 (4%)

Query: 165  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
            VV V+  E+H  F+   G+V++ G       G   T   +  P+ + AL+     +  AG
Sbjct: 1415 VVDVACGEHHVLFITGQGEVYSLGTGVLGALGQGTTVDQLVEPKQILALQKEHAVRAAAG 1474

Query: 225  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT--PKSIAPLEEVGSVVQIAAGPSYML 282
             NF+  LT  G V++ G+   GQLGH D  D PT  P  I  L ++  + +IAAG  + +
Sbjct: 1475 ENFSMVLTRDGVVYSFGAADKGQLGHPDPQDMPTGYPCPIDALAKI-KITKIAAGHQHAM 1533

Query: 283  AVTGNGVVYSFGSGSNFCLGHGEQHDE-LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
            A++  G VY +G+     LG   + DE L PR +      G+ VV  + G  H V +D +
Sbjct: 1534 AISEYGEVYLWGANDAGQLGFETEDDEQLVPRHLPF----GLPVVDAAGGKSHTVIIDQA 1589

Query: 342  GYV 344
            G V
Sbjct: 1590 GRV 1592



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/188 (31%), Positives = 95/188 (50%), Gaps = 9/188 (4%)

Query: 165  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRD--TNRPIFRPRLVEALKGVPCKQVT 222
            V++V  +      + +SG+V+  G +S F    +D  T  P   P  + ALKG     V 
Sbjct: 1361 VIKVGCASGFNVALSRSGKVYGWGSSSLFPLRTKDNRTATPGI-PHTIRALKGKRVVDVA 1419

Query: 223  AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAGPSYM 281
             G +   F+T +G V++ G+   G LG G T+D+   PK I  L++    V+ AAG ++ 
Sbjct: 1420 CGEHHVLFITGQGEVYSLGTGVLGALGQGTTVDQLVEPKQILALQK-EHAVRAAAGENFS 1478

Query: 282  LAVTGNGVVYSFGSGSNFCLGHGEQHDELQ--PRAIQTFRRKGIHVVRVSAGDEHVVALD 339
            + +T +GVVYSFG+     LGH +  D     P  I    +  I + +++AG +H +A+ 
Sbjct: 1479 MVLTRDGVVYSFGAADKGQLGHPDPQDMPTGYPCPIDALAK--IKITKIAAGHQHAMAIS 1536

Query: 340  SSGYVSLC 347
              G V L 
Sbjct: 1537 EYGEVYLW 1544



 Score = 64.3 bits (155), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 49/182 (26%), Positives = 79/182 (43%), Gaps = 4/182 (2%)

Query: 114  MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            + +  G +H L I+    V+S G+ + G LG G    Q V   +I      H V+ +A E
Sbjct: 1416 VDVACGEHHVLFITGQGEVYSLGTGVLGALGQGTTVDQLVEPKQILALQKEHAVRAAAGE 1475

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
            N +  + + G V++ G       GH D  + P   P  ++AL  +   ++ AG      +
Sbjct: 1476 NFSMVLTRDGVVYSFGAADKGQLGHPDPQDMPTGYPCPIDALAKIKITKIAAGHQHAMAI 1535

Query: 232  TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            +  G V+  G+N  GQLG     D        P      VV  A G S+ + +   G VY
Sbjct: 1536 SEYGEVYLWGANDAGQLGFETEDDEQLVPRHLPFGL--PVVDAAGGKSHTVIIDQAGRVY 1593

Query: 292  SF 293
            ++
Sbjct: 1594 AW 1595



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 60/190 (31%), Positives = 86/190 (45%), Gaps = 13/190 (6%)

Query: 165  VVQVSASENHAAFVLQSGQVFTCGD-----NSSFCCGHRDTNRPIFRPRLVEAL--KGVP 217
            VV V+ S  HA F+++SG V+T  D     NS               P  V  L  KG  
Sbjct: 1301 VVDVACSSTHALFLVESGDVYTVADKLVESNSIPVAQPHRKGDGALTPHQVPQLQKKGRR 1360

Query: 218  CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD--TLDRPTPKSIAPLEEVGSVVQIA 275
              +V     F   L+  G V+  GS++   L   D  T     P +I  L+    VV +A
Sbjct: 1361 VIKVGCASGFNVALSRSGKVYGWGSSSLFPLRTKDNRTATPGIPHTIRALKG-KRVVDVA 1419

Query: 276  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEH 334
             G  ++L +TG G VYS G+G    LG G   D+L +P+ I   +++  H VR +AG+  
Sbjct: 1420 CGEHHVLFITGQGEVYSLGTGVLGALGQGTTVDQLVEPKQILALQKE--HAVRAAAGENF 1477

Query: 335  VVALDSSGYV 344
             + L   G V
Sbjct: 1478 SMVLTRDGVV 1487


>gi|47216552|emb|CAG04730.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1036

 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 106/218 (48%), Gaps = 6/218 (2%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           ++ G  HTL +++   VFS G    G LG      +CV   R I   S   + QV+    
Sbjct: 89  VSCGESHTLALNDKGQVFSWGLGSNGQLGLN-NFEECVRVPRNIKCLSDVQIAQVACGYW 147

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  + + GQVF+ G N     G       I  P+++++L+G+P  Q++AG   +  +T+
Sbjct: 148 HSHALSKGGQVFSWGQNQFGQLGLGMHGSSISTPQIIQSLQGIPFAQLSAGGAHSFAITL 207

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V   G N  GQLG  DT DR  P  +  L     V+ ++ G  +  A+T    V++F
Sbjct: 208 SGAVFGWGKNKFGQLGLNDTKDRWFPALLKSLRS-QRVIFVSCGEDHTAALTKLRGVFTF 266

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
           G+G    LGH   + E+ PR +  F   G  V ++S G
Sbjct: 267 GAGGYGQLGHNCTNHEINPRKV--FELMGNVVTQISCG 302



 Score = 81.3 bits (199), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 66/224 (29%), Positives = 109/224 (48%), Gaps = 12/224 (5%)

Query: 119 GRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 177
           G  HT+ L+ + +V++CG +  G LGH     +      ++   A  +V VS  E+H   
Sbjct: 42  GLKHTVFLLDDGTVYTCGCNDLGQLGHEKSRKKPEHVVALD---AQIIVAVSCGESHTLA 98

Query: 178 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
           +   GQVF+ G  S+   G  +    +  PR ++ L  V   QV  G   +  L+  G V
Sbjct: 99  LNDKGQVFSWGLGSNGQLGLNNFEECVRVPRNIKCLSDVQIAQVACGYWHSHALSKGGQV 158

Query: 238 HTCGSNTHGQLG---HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
            + G N  GQLG   HG ++   TP+ I  L+ +    Q++AG ++  A+T +G V+ +G
Sbjct: 159 FSWGQNQFGQLGLGMHGSSIS--TPQIIQSLQGI-PFAQLSAGGAHSFAITLSGAVFGWG 215

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
                 LG  +  D   P  +++ R +   V+ VS G++H  AL
Sbjct: 216 KNKFGQLGLNDTKDRWFPALLKSLRSQ--RVIFVSCGEDHTAAL 257



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 64/213 (30%), Positives = 97/213 (45%), Gaps = 9/213 (4%)

Query: 135 GSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R   F     V  V     H  F+L  G V+TCG N   
Sbjct: 5   GNASYGQLGLGGIDEEIVVEPRKCEFFHGKRVCDVGCGLKHTVFLLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 253
             GH  + +   +P  V AL       V+ G + T  L  +G V + G  ++GQLG  + 
Sbjct: 65  QLGHEKSRK---KPEHVVALDAQIIVAVSCGESHTLALNDKGQVFSWGLGSNGQLGLNNF 121

Query: 254 LD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ- 311
            +    P++I  L +V  + Q+A G  +  A++  G V+S+G      LG G     +  
Sbjct: 122 EECVRVPRNIKCLSDV-QIAQVACGYWHSHALSKGGQVFSWGQNQFGQLGLGMHGSSIST 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           P+ IQ+   +GI   ++SAG  H  A+  SG V
Sbjct: 181 PQIIQSL--QGIPFAQLSAGGAHSFAITLSGAV 211


>gi|344281808|ref|XP_003412669.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Loxodonta
           africana]
          Length = 551

 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/218 (30%), Positives = 97/218 (44%), Gaps = 4/218 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N+ +F  G++ CG LG G +    +   R++  S   +  +S  S  H       G+VFT
Sbjct: 64  NNEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFT 122

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN  +    +   L      +V  G   +  LT  G V   G N  G
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCYISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 182

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T ++P P+ +    +  +VV IA G    +AV   G VY +G   N  LG G  
Sbjct: 183 QVGSGSTANQPIPRRVTGCLQNKAVVNIACGQMCSMAVVDAGEVYVWGYNGNGQLGLGSS 242

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            +  QP   +    +GIHV RV+ G  H + L   G V
Sbjct: 243 GN--QPTPCRVAALQGIHVQRVACGYAHTLVLTDEGQV 278



 Score = 64.3 bits (155), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 57/187 (30%), Positives = 93/187 (49%), Gaps = 12/187 (6%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G YH+L L S+  VF+ G +  G +G G    Q +            VV ++  +
Sbjct: 155 IEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKAVVNIACGQ 214

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             +  V+ +G+V+  G N +   G   + N+P   P  V AL+G+  ++V  G   T  L
Sbjct: 215 MCSMAVVDAGEVYVWGYNGNGQLGLGSSGNQPT--PCRVAALQGIHVQRVACGYAHTLVL 272

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDR--PTPKSIAPLEEVGSVVQIAAGPS--YMLAVTGN 287
           T  G V+  G+N++GQLG G+  ++  PTP S+    E   +++IAA  S     A T  
Sbjct: 273 TDEGQVYAWGANSYGQLGTGNKSNQSYPTPISV----EKDRIIEIAACHSTHTSAAKTQG 328

Query: 288 GVVYSFG 294
           G VY +G
Sbjct: 329 GNVYMWG 335



 Score = 40.0 bits (92), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 53/116 (45%), Gaps = 3/116 (2%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE-EVGSVVQIAAGPSYMLAVTGNG 288
           + T+   +   G+N  G LG GD      P+ +  L  +  + +   +GP  +LA T  G
Sbjct: 60  YTTVNNEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATT-EG 118

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            V+++G  +   LG+G  +  L P  I T       V+ V+ G  H + L S G V
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLVPCYIST-NLSNKQVIEVACGSYHSLVLTSDGEV 173


>gi|186524238|ref|NP_197443.3| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
 gi|332005320|gb|AED92703.1| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
          Length = 1105

 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 87/175 (49%), Gaps = 5/175 (2%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHR-DTNRPIFRPRLVEALKGVPCKQVTA 223
           V  ++    HA  V + G+ F+ G+ S    GH  D+N  +  P+L++AL     + V  
Sbjct: 314 VQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSN--VQHPKLIDALNTTNIELVAC 371

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G   +  +T+ G ++T G    G LGHG+ +    PK +  L E   V  IA GP +   
Sbjct: 372 GEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAV 431

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           VT  G +++FG G+   LGHG++     PR + +   KG+  VR + G  H  A+
Sbjct: 432 VTSAGQLFTFGDGTFGVLGHGDRKSVFIPREVDSL--KGLRTVRAACGVWHTAAV 484



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 74/257 (28%), Positives = 118/257 (45%), Gaps = 20/257 (7%)

Query: 99  SVEHSSDIVETSAGNMQITT-GRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR 156
           +V+H   I   +  N+++   G YH+  ++ S  +++ G    G+LGHG E +  V   R
Sbjct: 351 NVQHPKLIDALNTTNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVP-KR 409

Query: 157 INF-PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           +NF     HV  ++    H A V  +GQ+FT GD +    GH D  + +F PR V++LKG
Sbjct: 410 VNFLMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGD-RKSVFIPREVDSLKG 468

Query: 216 VPCKQVTAGLNFTGFLT------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +   +   G+  T  +               G + T G     +LGHGD   +  P  +A
Sbjct: 469 LRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVPTCVA 528

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 323
            L E  +  Q+A G S  +A+T +G VY+ GS     LG+     ++  R      +   
Sbjct: 529 ALVEP-NFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNPHADGKVPTRVDGKLHKS-- 585

Query: 324 HVVRVSAGDEHVVALDS 340
            V  ++ G  HV  L S
Sbjct: 586 FVEEIACGAYHVAVLTS 602



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 67/224 (29%), Positives = 102/224 (45%), Gaps = 16/224 (7%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G YHT +++++  +F+ G    GVLGHG   +  +    ++       V+ +    H
Sbjct: 422 IACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVFIP-REVDSLKGLRTVRAACGVWH 480

Query: 175 AAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            A V++            SG++FT GD      GH D   P   P  V AL      QV 
Sbjct: 481 TAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGD-KEPKLVPTCVAALVEPNFCQVA 539

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
            G + T  LT  GHV+T GS  +GQLG+    D   P  +        V +IA G  ++ 
Sbjct: 540 CGHSLTVALTTSGHVYTMGSPVYGQLGNPHA-DGKVPTRVDGKLHKSFVEEIACGAYHVA 598

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
            +T    VY++G GSN  LGHG+  D   P  +++ + K +  +
Sbjct: 599 VLTSRTEVYTWGKGSNGRLGHGDADDRNSPTLVESLKDKQVKSI 642



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 67/138 (48%), Gaps = 2/138 (1%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E+   +  + +  G      +T +G   + G  + G+LGHG   +   PK I  L 
Sbjct: 303 PKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLIDALN 362

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
              ++  +A G  +  AVT +G +Y++G G    LGHG +     P+ +  F  +GIHV 
Sbjct: 363 TT-NIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVN-FLMEGIHVS 420

Query: 327 RVSAGDEHVVALDSSGYV 344
            ++ G  H   + S+G +
Sbjct: 421 SIACGPYHTAVVTSAGQL 438


>gi|357520079|ref|XP_003630328.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355524350|gb|AET04804.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
          Length = 316

 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/213 (30%), Positives = 106/213 (49%), Gaps = 7/213 (3%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ-VFTCGD 189
           V S G    G LGHG +T   +  T+++      +V V+   ++     +SG+ V++ G 
Sbjct: 70  VCSWGRGEDGQLGHG-DTDDRLLPTKLSAFDGQDIVSVTCGADYTVARSKSGKDVYSWGW 128

Query: 190 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
                 GH D +  +F P  + AL+G+  KQ++ G      +T+   V + G N +G+LG
Sbjct: 129 GDFGRLGHGDPSD-LFIPHPIRALQGLRIKQISCGDCHCLAVTMENKVLSWGRNQNGELG 187

Query: 250 HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE 309
            G T D   P+ I   E +  +  +AAG  + +A+T +G +Y +G G    LG G+ +D 
Sbjct: 188 LGTTKDSHVPQKILAFEGI-RIKMVAAGAEHSVAITEDGDLYGWGWGRYGNLGLGDTNDR 246

Query: 310 LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           L P  +      G  +V VS G  H +++ SSG
Sbjct: 247 LIPEKVNI---DGDKIVMVSCGWRHTISISSSG 276



 Score = 72.0 bits (175), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 59/215 (27%), Positives = 98/215 (45%), Gaps = 6/215 (2%)

Query: 114 MQITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS 171
           + +T G  +T+  S S   V+S G    G LGHG  +   +    I       + Q+S  
Sbjct: 104 VSVTCGADYTVARSKSGKDVYSWGWGDFGRLGHGDPSDLFIPHP-IRALQGLRIKQISCG 162

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           + H   V    +V + G N +   G   T +    P+ + A +G+  K V AG   +  +
Sbjct: 163 DCHCLAVTMENKVLSWGRNQNGELG-LGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAI 221

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           T  G ++  G   +G LG GDT DR  P+ +    +   +V ++ G  + ++++ +G +Y
Sbjct: 222 TEDGDLYGWGWGRYGNLGLGDTNDRLIPEKVNI--DGDKIVMVSCGWRHTISISSSGGLY 279

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
           + G      LGHG+  D L PR +Q    K I  V
Sbjct: 280 THGWSKYGQLGHGDFEDCLVPRKVQALSDKLISQV 314



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 66/222 (29%), Positives = 99/222 (44%), Gaps = 10/222 (4%)

Query: 122 HTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQS 181
           H LLIS  +     S    +L    E+++ ++   I+ P      ++ +  N +A     
Sbjct: 13  HVLLISAGA-----SHTVALLSKQFESSEMLARFLISTPLLPESWRLCSKVNASAVNFPG 67

Query: 182 GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHTC 240
             V + G       GH DT+  +  P  + A  G     VT G ++T   +  G  V++ 
Sbjct: 68  NVVCSWGRGEDGQLGHGDTDDRLL-PTKLSAFDGQDIVSVTCGADYTVARSKSGKDVYSW 126

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
           G    G+LGHGD  D   P  I  L+ +  + QI+ G  + LAVT    V S+G   N  
Sbjct: 127 GWGDFGRLGHGDPSDLFIPHPIRALQGL-RIKQISCGDCHCLAVTMENKVLSWGRNQNGE 185

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           LG G   D   P+ I  F  +GI +  V+AG EH VA+   G
Sbjct: 186 LGLGTTKDSHVPQKILAF--EGIRIKMVAAGAEHSVAITEDG 225


>gi|301618542|ref|XP_002938670.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like [Xenopus
           (Silurana) tropicalis]
          Length = 1029

 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/248 (27%), Positives = 117/248 (47%), Gaps = 12/248 (4%)

Query: 102 HSSDIVETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP 160
             +D  ++     +++ G  HTL L+ + ++ SCG +  G LG     +   S  +I+  
Sbjct: 25  KENDYFQSQECVQKVSCGEKHTLYLLEDGTLLSCGQNPYGQLGRKSNNS---SIEQISSL 81

Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
            A  +V +S   NH+  V   G +++ GD S    G  + +   F P+ +  L      Q
Sbjct: 82  EAQTIVDISCGTNHSVAVSDEGSIYSWGDGSEGQLGTGNLSSRNFTPKKITGLFNTKIIQ 141

Query: 221 VTAGLNFTGF-LTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGP 278
           ++ G NF    L+  G V + G N  GQLG G   +++ TP+ +  L+ +  +VQ+ AG 
Sbjct: 142 ISCG-NFHSLALSEDGRVFSWGQNKCGQLGLGSQIINQATPQLVKSLKGI-PLVQVTAGG 199

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQ--HDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
           S   A++ +G V+++G  +   LG          +P A+ + R  G  V  +S G+EH  
Sbjct: 200 SQSFALSMSGTVFAWGKNNAGQLGFKSDPMKGTFKPHAVNSLRNLG--VAYISCGEEHTA 257

Query: 337 ALDSSGYV 344
            L   G V
Sbjct: 258 VLSKDGSV 265



 Score = 79.0 bits (193), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 58/187 (31%), Positives = 92/187 (49%), Gaps = 5/187 (2%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QI+ G +H+L +S +  VFS G + CG LG G +     +   +       +VQV+A  
Sbjct: 140 IQISCGNFHSLALSEDGRVFSWGQNKCGQLGLGSQIINQATPQLVKSLKGIPLVQVTAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHR-DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           + +  +  SG VF  G N++   G + D  +  F+P  V +L+ +    ++ G   T  L
Sbjct: 200 SQSFALSMSGTVFAWGKNNAGQLGFKSDPMKGTFKPHAVNSLRNLGVAYISCGEEHTAVL 259

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY-MLAVTGNGVV 290
           +  G V+T G +THGQLG         P+ I   +  G V Q+A G  + +L V     +
Sbjct: 260 SKDGSVYTFGDDTHGQLGQNSGNQTSVPQKIE--DYAGQVSQVACGRYHTLLYVFSCNRI 317

Query: 291 YSFGSGS 297
            SFG GS
Sbjct: 318 VSFGKGS 324



 Score = 78.2 bits (191), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 113/229 (49%), Gaps = 13/229 (5%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + I+ G  H++ +S+  S++S G    G LG G  +++  +  +I       ++Q+S   
Sbjct: 87  VDISCGTNHSVAVSDEGSIYSWGDGSEGQLGTGNLSSRNFTPKKITGLFNTKIIQISCGN 146

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR---PRLVEALKGVPCKQVTAGLNFTG 229
            H+  + + G+VF+ G N    CG       I     P+LV++LKG+P  QVTAG + + 
Sbjct: 147 FHSLALSEDGRVFSWGQNK---CGQLGLGSQIINQATPQLVKSLKGIPLVQVTAGGSQSF 203

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPT--PKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
            L++ G V   G N  GQLG      + T  P ++  L  +G V  I+ G  +   ++ +
Sbjct: 204 ALSMSGTVFAWGKNNAGQLGFKSDPMKGTFKPHAVNSLRNLG-VAYISCGEEHTAVLSKD 262

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
           G VY+FG  ++  LG    +    P+ I+ +  +   V +V+ G  H +
Sbjct: 263 GSVYTFGDDTHGQLGQNSGNQTSVPQKIEDYAGQ---VSQVACGRYHTL 308


>gi|269972832|emb|CBE66996.1| CG9135-PA [Drosophila ananassae]
          Length = 486

 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 62/226 (27%), Positives = 102/226 (45%), Gaps = 27/226 (11%)

Query: 122 HTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           HT+LI+ +      G +  G LG   +       T I      +VVQ +   +H  F+  
Sbjct: 126 HTILINMDRKAMGFGRNPSGQLGLSQDIKLVEKPTIIPALEQENVVQAAVGRHHTLFLTD 185

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           +G V+ CG+N S  CG  +++  I+ P  +   +G P  ++  G  F+  L I+G++HT 
Sbjct: 186 TGTVYACGENKSGQCGVGNSHANIYTPTPIN-YRGPPIIRIGCGAEFSVILDIKGNLHTF 244

Query: 241 GSNTHGQLGHGDTLD------------RPTPKSI------------APLEEVGSVVQIAA 276
           G   +GQLGH                   +PK +             P++ V  +V  A 
Sbjct: 245 GLPEYGQLGHNTDAKYFVNANKLSFHFETSPKKVVLYIEKSKEGHVTPVDGV-QIVDFAC 303

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           G ++ +A+     VYS+G G    LGH E  DE+ PR ++ +  +G
Sbjct: 304 GNNHTVAIDSKKRVYSWGFGGFGRLGHAEPKDEMVPRLMKFYDAQG 349



 Score = 54.7 bits (130), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 53/211 (25%), Positives = 85/211 (40%), Gaps = 41/211 (19%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 219
           PSAAH + ++       F          G N S   G     + + +P ++ AL+     
Sbjct: 122 PSAAHTILINMDRKAMGF----------GRNPSGQLGLSQDIKLVEKPTIIPALEQENVV 171

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT---LDRPTPKSI-APLEEVGSVVQIA 275
           Q   G + T FLT  G V+ CG N  GQ G G++   +  PTP +   P      +++I 
Sbjct: 172 QAAVGRHHTLFLTDTGTVYACGENKSGQCGVGNSHANIYTPTPINYRGP-----PIIRIG 226

Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ------------HDELQPRAIQTFRRK-- 321
            G  + + +   G +++FG      LGH               H E  P+ +  +  K  
Sbjct: 227 CGAEFSVILDIKGNLHTFGLPEYGQLGHNTDAKYFVNANKLSFHFETSPKKVVLYIEKSK 286

Query: 322 --------GIHVVRVSAGDEHVVALDSSGYV 344
                   G+ +V  + G+ H VA+DS   V
Sbjct: 287 EGHVTPVDGVQIVDFACGNNHTVAIDSKKRV 317


>gi|449681031|ref|XP_002154536.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like, partial
           [Hydra magnipapillata]
          Length = 1132

 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 70/245 (28%), Positives = 116/245 (47%), Gaps = 10/245 (4%)

Query: 105 DIVETSAGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA 163
           ++V T     +I  G+  T L+ +N SVF+CG    G LG G    +  S   I      
Sbjct: 313 NLVSTFKQVREIVCGQNCTFLLQTNGSVFACGEGTYGRLGQGTSDDEH-SLVPITELQGY 371

Query: 164 HVVQVSAS---ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
            ++Q++ S   + H   V  SG+VF+ GD      GH ++ R   +P+ + AL+     Q
Sbjct: 372 CIIQLATSLGGDGHTLAVADSGEVFSWGDGDYGKLGHGNSERQ-RKPKQIIALQAEHVVQ 430

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
            + G   +  LT  G V T G   +G LG G    + TP+ I  L+    + QIA G  +
Sbjct: 431 ASCGFKHSAVLTKDGKVFTFGQGQYGILGDGGNSPQKTPQLILSLKN-EHISQIACGKDH 489

Query: 281 MLAVTGNG-VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
            LA+  NG  +Y++G G    LG G       P  + ++R   + + +++ G +  + L 
Sbjct: 490 TLALANNGKKLYAWGDGEFGKLGLGSTSVRSIPNLVDSYR--NVCLKKIACGSKFSIVLA 547

Query: 340 SSGYV 344
           ++GY+
Sbjct: 548 TNGYL 552



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 104/228 (45%), Gaps = 7/228 (3%)

Query: 119 GRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 177
           G  HTL +++S  VFS G    G LGHG    Q     +I    A HVVQ S    H+A 
Sbjct: 382 GDGHTLAVADSGEVFSWGDGDYGKLGHGNSERQ-RKPKQIIALQAEHVVQASCGFKHSAV 440

Query: 178 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH- 236
           + + G+VFT G       G    N P   P+L+ +LK     Q+  G + T  L   G  
Sbjct: 441 LTKDGKVFTFGQGQYGILGD-GGNSPQKTPQLILSLKNEHISQIACGKDHTLALANNGKK 499

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           ++  G    G+LG G T  R  P  +     V  + +IA G  + + +  NG +Y+FG  
Sbjct: 500 LYAWGDGEFGKLGLGSTSVRSIPNLVDSYRNV-CLKKIACGSKFSIVLATNGYLYTFGHK 558

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
               +   +  D   P+ + +     I  + ++ G  +++ALD+SG +
Sbjct: 559 DFLGIAETDLLDNTIPQIVSSLMPHPI--IDIAVGCNYILALDNSGNI 604



 Score = 70.9 bits (172), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 48/145 (33%), Positives = 72/145 (49%), Gaps = 12/145 (8%)

Query: 205 FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            +P LV   K V  +++  G N T  L   G V  CG  T+G+LG G + D     S+ P
Sbjct: 310 LQPNLVSTFKQV--REIVCGQNCTFLLQTNGSVFACGEGTYGRLGQGTSDDE---HSLVP 364

Query: 265 LEEVGS--VVQIAA---GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
           + E+    ++Q+A    G  + LAV  +G V+S+G G    LGHG    + +P+ I   +
Sbjct: 365 ITELQGYCIIQLATSLGGDGHTLAVADSGEVFSWGDGDYGKLGHGNSERQRKPKQIIALQ 424

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYV 344
            +  HVV+ S G +H   L   G V
Sbjct: 425 AE--HVVQASCGFKHSAVLTKDGKV 447



 Score = 38.5 bits (88), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 32/141 (22%), Positives = 62/141 (43%), Gaps = 4/141 (2%)

Query: 115 QITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           QI  G+ HTL ++N+   +++ G    G LG G  + + +     ++ +   + +++   
Sbjct: 482 QIACGKDHTLALANNGKKLYAWGDGEFGKLGLGSTSVRSIPNLVDSYRNVC-LKKIACGS 540

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             +  +  +G ++T G          D       P++V +L   P   +  G N+   L 
Sbjct: 541 KFSIVLATNGYLYTFGHKDFLGIAETDLLDNTI-PQIVSSLMPHPIIDIAVGCNYILALD 599

Query: 233 IRGHVHTCGSNTHGQLGHGDT 253
             G++   G+N  GQLG G T
Sbjct: 600 NSGNIWGWGTNEEGQLGIGTT 620


>gi|113205375|gb|AAU93591.2| Zinc finger protein, putative [Solanum demissum]
          Length = 1127

 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/242 (28%), Positives = 112/242 (46%), Gaps = 29/242 (11%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           ++ G +HT LI+++  +F+ G    G LGHG + + C++   +   +    ++V+    H
Sbjct: 420 VSCGPWHTALITSAGRLFTFGDGTFGALGHG-DRSGCITPREVETFNGLKTLKVACGVWH 478

Query: 175 AAFVLQ-------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
            A V++             SG +FT GD      GH D N+P   P+ + AL      +V
Sbjct: 479 TAAVVELMSGLDSRPSDAPSGTLFTWGDGDKGKLGHGD-NKPRLAPQCITALVDKSFSEV 537

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEV---GSVVQIAA 276
                 T  LT  G V+T GSN +GQLG       P    ++P+  E+     +V +I+ 
Sbjct: 538 ACSYAMTVALTTTGRVYTMGSNVYGQLGC------PLANGMSPICVEDYLVDSTVEEISC 591

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
           G  ++  +T    VY++G G N  LGHG+  ++  P  +   R K   V R+  G     
Sbjct: 592 GSHHVAVLTSRTEVYTWGKGENGQLGHGDCENKCTPTLVDILRDK--QVKRIVCGSNFSA 649

Query: 337 AL 338
           A+
Sbjct: 650 AI 651



 Score = 75.1 bits (183), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 48/176 (27%), Positives = 86/176 (48%), Gaps = 5/176 (2%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  +S    HA  V + G+ F+ G+ +    GH      +  P+L++  KG+  + +  G
Sbjct: 310 VQNISCGNRHAMLVTKQGEAFSWGEEAGGRLGH-GAETDVSHPKLIKNFKGMNVELIACG 368

Query: 225 LNFTGFLTIRGHVHTCG--SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
              +  +T  G ++T G  + + G LGH        PK +  L E   V  ++ GP +  
Sbjct: 369 EYHSCAVTSSGDLYTWGDGAKSSGLLGHRSEASHWIPKKVCGLMEGLRVSHVSCGPWHTA 428

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            +T  G +++FG G+   LGHG++   + PR ++TF   G+  ++V+ G  H  A+
Sbjct: 429 LITSAGRLFTFGDGTFGALGHGDRSGCITPREVETF--NGLKTLKVACGVWHTAAV 482



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 84/196 (42%), Gaps = 18/196 (9%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           I  G YH+  +++S     +  G+   G+LGH  E +  +            V  VS   
Sbjct: 365 IACGEYHSCAVTSSGDLYTWGDGAKSSGLLGHRSEASHWIPKKVCGLMEGLRVSHVSCGP 424

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL- 231
            H A +  +G++FT GD +    GH D +  I  PR VE   G+   +V  G+  T  + 
Sbjct: 425 WHTALITSAGRLFTFGDGTFGALGHGDRSGCI-TPREVETFNGLKTLKVACGVWHTAAVV 483

Query: 232 ------------TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
                          G + T G    G+LGHGD   R  P+ I  L +  S  ++A   +
Sbjct: 484 ELMSGLDSRPSDAPSGTLFTWGDGDKGKLGHGDNKPRLAPQCITALVD-KSFSEVACSYA 542

Query: 280 YMLAVTGNGVVYSFGS 295
             +A+T  G VY+ GS
Sbjct: 543 MTVALTTTGRVYTMGS 558



 Score = 48.5 bits (114), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 3/92 (3%)

Query: 251 GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL 310
           G  +D  TPKS+     V  V  I+ G  + + VT  G  +S+G  +   LGHG + D  
Sbjct: 291 GTRIDANTPKSLES-SVVLDVQNISCGNRHAMLVTKQGEAFSWGEEAGGRLGHGAETDVS 349

Query: 311 QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            P+ I+ F  KG++V  ++ G+ H  A+ SSG
Sbjct: 350 HPKLIKNF--KGMNVELIACGEYHSCAVTSSG 379


>gi|427782019|gb|JAA56461.1| Putative hect e3 ubiquitin ligase hect e3 ubiquitin ligase
           [Rhipicephalus pulchellus]
          Length = 1480

 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 69/232 (29%), Positives = 112/232 (48%), Gaps = 8/232 (3%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           + +G  H L +S    V+S G    G LGHG +++ C     I       VV V+    H
Sbjct: 673 VNSGGKHCLALSAEGEVYSWGEGDDGKLGHGNKSS-CERPRVIESLRGKEVVDVACGGAH 731

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG--VPCKQVTAGLNFTGFLT 232
           +A +  SG+++T G       GH D++  + RP+ VEAL G  V C    +G   T  +T
Sbjct: 732 SACITASGELYTWGKGRYGRLGHGDSDDQL-RPKKVEALSGWRVRCVACGSGDAQTLCVT 790

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
               V + G   +G+LG G +     P  +  L+ +G V+++  G  + +A+T +G VY+
Sbjct: 791 DDDCVWSWGDGDYGKLGRGGSDGCKVPLRVDLLQGMG-VIRVECGSQFSVALTASGSVYT 849

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           +G G    LGHG      +P+ +     +G  V+ ++ G  H VA   +G V
Sbjct: 850 WGKGDYHRLGHGTDDHVRRPKRVAAL--QGKKVICIAVGSLHCVACTDTGEV 899



 Score = 74.7 bits (182), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 56/182 (30%), Positives = 89/182 (48%), Gaps = 8/182 (4%)

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
           V V++   H   +   G+V++ G+      GH + +    RPR++E+L+G     V  G 
Sbjct: 671 VVVNSGGKHCLALSAEGEVYSWGEGDDGKLGHGNKSS-CERPRVIESLRGKEVVDVACGG 729

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA---GPSYML 282
             +  +T  G ++T G   +G+LGHGD+ D+  PK +  L   G  V+  A   G +  L
Sbjct: 730 AHSACITASGELYTWGKGRYGRLGHGDSDDQLRPKKVEALS--GWRVRCVACGSGDAQTL 787

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            VT +  V+S+G G    LG G       P  +     +G+ V+RV  G +  VAL +SG
Sbjct: 788 CVTDDDCVWSWGDGDYGKLGRGGSDGCKVPLRVDLL--QGMGVIRVECGSQFSVALTASG 845

Query: 343 YV 344
            V
Sbjct: 846 SV 847



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 65/150 (43%), Gaps = 3/150 (2%)

Query: 118 TGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL +++   V+S G    G LG G  +  C    R++      V++V      + 
Sbjct: 781 SGDAQTLCVTDDDCVWSWGDGDYGKLGRG-GSDGCKVPLRVDLLQGMGVIRVECGSQFSV 839

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            +  SG V+T G       GH  T+  + RP+ V AL+G     +  G       T  G 
Sbjct: 840 ALTASGSVYTWGKGDYHRLGH-GTDDHVRRPKRVAALQGKKVICIAVGSLHCVACTDTGE 898

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           V+T G N  GQLG G       P+ +A L+
Sbjct: 899 VYTWGDNDEGQLGDGTVNAIHKPRLVAALQ 928



 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 45/137 (32%), Positives = 65/137 (47%), Gaps = 3/137 (2%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P   EAL  +   QV  G      +T  G V+  G    G+LG G T     P  +  L+
Sbjct: 605 PMPCEALSALRPIQVVGGEQTLFAVTADGKVYATGYGAGGRLGIGGTDSVSCPTLLESLQ 664

Query: 267 EVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
            V    V + +G  + LA++  G VYS+G G +  LGHG +    +PR I++ R  G  V
Sbjct: 665 HVFIKKVVVNSGGKHCLALSAEGEVYSWGEGDDGKLGHGNKSSCERPRVIESLR--GKEV 722

Query: 326 VRVSAGDEHVVALDSSG 342
           V V+ G  H   + +SG
Sbjct: 723 VDVACGGAHSACITASG 739


>gi|410957262|ref|XP_003985250.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Felis catus]
          Length = 1031

 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 69/198 (34%), Positives = 97/198 (48%), Gaps = 8/198 (4%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++ G YH+L +S +  VFS GS+  G LG G E     S  R+       + QV+A  
Sbjct: 142 IQVSCGNYHSLALSEDGQVFSWGSNSHGQLGLGKELPSQASPQRVRSLDGIPLAQVAAGG 201

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPI--FRPRLVEALKGVPCKQVTAGLNFTGF 230
            H+  +  SG  F  G N++       +N P+  ++PR V ALK +    ++ G   T  
Sbjct: 202 AHSFALSLSGTSFGWGSNNAGQLAFFGSNVPVQSYKPRSVSALKTLGVVYISCGHEHTAV 261

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA-VTGNGV 289
           LT  G V T G N+ GQLGH  T ++  P+ +  +E  G V QI  G  + LA V   G 
Sbjct: 262 LTQNGKVFTFGDNSCGQLGHSPTAEKTGPQLMEGIE--GLVSQIDCGSYHTLAYVYTTGQ 319

Query: 290 VYSFGSGS--NFCLGHGE 305
           V SFG G     C  H E
Sbjct: 320 VVSFGRGPSCKSCSNHPE 337



 Score = 78.6 bits (192), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 72/244 (29%), Positives = 113/244 (46%), Gaps = 27/244 (11%)

Query: 115 QITTGRYHTLLI-SNSSVFSCGSSLCGVLG-------HGPETTQCVSFTRINFPSAAHVV 166
           Q  +G  H+LL+ S+ +V SCG +  G LG         P+  Q +   R+         
Sbjct: 38  QAASGERHSLLLLSDGAVHSCGDNSRGQLGRRGLQREEQPKPIQALETLRVEL------- 90

Query: 167 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
            VS  + H+  V   G+VF  G  S    G  +       P+ ++ L G+   QV+ G  
Sbjct: 91  -VSCGKEHSLAVCYKGRVFAWGAGSEGQLGIGEFKEINLIPQKIKTLTGIKIIQVSCGNY 149

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            +  L+  G V + GSN+HGQLG G  L  + +P+ +  L+ +  + Q+AAG ++  A++
Sbjct: 150 HSLALSEDGQVFSWGSNSHGQLGLGKELPSQASPQRVRSLDGI-PLAQVAAGGAHSFALS 208

Query: 286 GNGVVYSFGSGSNFC-----LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            +G   SFG GSN        G        +PR++   +  G  VV +S G EH   L  
Sbjct: 209 LSGT--SFGWGSNNAGQLAFFGSNVPVQSYKPRSVSALKTLG--VVYISCGHEHTAVLTQ 264

Query: 341 SGYV 344
           +G V
Sbjct: 265 NGKV 268



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 99/185 (53%), Gaps = 6/185 (3%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 219
           P    + Q ++ E H+  +L  G V +CGDNS    G R   R   +P+ ++AL+ +  +
Sbjct: 31  PGGPELRQAASGERHSLLLLSDGAVHSCGDNSRGQLGRRGLQREE-QPKPIQALETLRVE 89

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGP 278
            V+ G   +  +  +G V   G+ + GQLG G+  +    P+ I  L  +  ++Q++ G 
Sbjct: 90  LVSCGKEHSLAVCYKGRVFAWGAGSEGQLGIGEFKEINLIPQKIKTLTGI-KIIQVSCGN 148

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            + LA++ +G V+S+GS S+  LG G++   +  P+ +++    GI + +V+AG  H  A
Sbjct: 149 YHSLALSEDGQVFSWGSNSHGQLGLGKELPSQASPQRVRSL--DGIPLAQVAAGGAHSFA 206

Query: 338 LDSSG 342
           L  SG
Sbjct: 207 LSLSG 211



 Score = 74.7 bits (182), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 107/228 (46%), Gaps = 12/228 (5%)

Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           ++ G+ H+L +     VF+ G+   G LG G      +   +I   +   ++QVS    H
Sbjct: 91  VSCGKEHSLAVCYKGRVFAWGAGSEGQLGIGEFKEINLIPQKIKTLTGIKIIQVSCGNYH 150

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           +  + + GQVF+ G NS    G          P+ V +L G+P  QV AG   +  L++ 
Sbjct: 151 SLALSEDGQVFSWGSNSHGQLGLGKELPSQASPQRVRSLDGIPLAQVAAGGAHSFALSLS 210

Query: 235 GHVHTCGSNTHGQL---GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           G     GSN  GQL   G    +    P+S++ L+ +G VV I+ G  +   +T NG V+
Sbjct: 211 GTSFGWGSNNAGQLAFFGSNVPVQSYKPRSVSALKTLG-VVYISCGHEHTAVLTQNGKVF 269

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH--VVRVSAGDEHVVA 337
           +FG  S   LGH    ++  P+ ++     GI   V ++  G  H +A
Sbjct: 270 TFGDNSCGQLGHSPTAEKTGPQLME-----GIEGLVSQIDCGSYHTLA 312



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/131 (35%), Positives = 68/131 (51%), Gaps = 4/131 (3%)

Query: 215 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 274
           G   +Q  +G   +  L   G VH+CG N+ GQLG         PK I  LE +  V  +
Sbjct: 33  GPELRQAASGERHSLLLLSDGAVHSCGDNSRGQLGRRGLQREEQPKPIQALETL-RVELV 91

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           + G  + LAV   G V+++G+GS   LG GE +   L P+ I+T    GI +++VS G+ 
Sbjct: 92  SCGKEHSLAVCYKGRVFAWGAGSEGQLGIGEFKEINLIPQKIKTL--TGIKIIQVSCGNY 149

Query: 334 HVVALDSSGYV 344
           H +AL   G V
Sbjct: 150 HSLALSEDGQV 160


>gi|426232148|ref|XP_004010096.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Ovis aries]
          Length = 992

 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/187 (34%), Positives = 92/187 (49%), Gaps = 6/187 (3%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S +  VFS G +  G LG G E     S  R+       + QV+A  
Sbjct: 103 IQVACGHYHSLALSEDGQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGG 162

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPI--FRPRLVEALKGVPCKQVTAGLNFTGF 230
            H+  +  SG  F  G N++        N P+  ++P LV ALK +    ++ G   T  
Sbjct: 163 AHSFALSLSGTSFGWGSNNAGQLALSGNNAPVQRYKPVLVGALKTLSVVFISCGYEHTAV 222

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA-VTGNGV 289
           LT  G V T G N++GQLGH  T ++  P+ +  +E  G V QI  G  + LA V   G 
Sbjct: 223 LTQDGKVFTFGDNSYGQLGHDSTAEKRGPQLVERIE--GLVSQIDCGSYHTLAYVYTTGQ 280

Query: 290 VYSFGSG 296
           V SFG G
Sbjct: 281 VVSFGRG 287



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 73/236 (30%), Positives = 109/236 (46%), Gaps = 17/236 (7%)

Query: 118 TGRYHTLLI-SNSSVFSCGSSLCGVLGHG--PETTQCVSFTRINFPSAAHVVQVSASENH 174
           +G +H+LL+ S+ +V SCG +  G LG    P   Q     RI      HV  VS  + H
Sbjct: 2   SGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQP---ERIPALETLHVALVSCGKEH 58

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           +  V   G+VF  G  S    G  +     F P+ ++ L  +   QV  G   +  L+  
Sbjct: 59  SLAVCHKGRVFAWGAASEGQLGIGELKETTFIPKKIKTLADIKIIQVACGHYHSLALSED 118

Query: 235 GHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
           G V + G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G   SF
Sbjct: 119 GQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGT--SF 175

Query: 294 GSGSN----FCL-GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G GSN      L G+       +P  +     K + VV +S G EH   L   G V
Sbjct: 176 GWGSNNAGQLALSGNNAPVQRYKPVLVGAL--KTLSVVFISCGYEHTAVLTQDGKV 229



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 64/226 (28%), Positives = 110/226 (48%), Gaps = 8/226 (3%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           ++ G+ H+L + +   VF+ G++  G LG G          +I   +   ++QV+    H
Sbjct: 52  VSCGKEHSLAVCHKGRVFAWGAASEGQLGIGELKETTFIPKKIKTLADIKIIQVACGHYH 111

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           +  + + GQVF+ G NS    G          P+ V +L+G+P  QV AG   +  L++ 
Sbjct: 112 SLALSEDGQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLS 171

Query: 235 GHVHTCGSNTHGQL---GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           G     GSN  GQL   G+   + R  P  +  L+ + SVV I+ G  +   +T +G V+
Sbjct: 172 GTSFGWGSNNAGQLALSGNNAPVQRYKPVLVGALKTL-SVVFISCGYEHTAVLTQDGKVF 230

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           +FG  S   LGH    ++  P+ ++  R +G+ V ++  G  H +A
Sbjct: 231 TFGDNSYGQLGHDSTAEKRGPQLVE--RIEGL-VSQIDCGSYHTLA 273


>gi|198421655|ref|XP_002121487.1| PREDICTED: similar to hect domain and RLD 4 [Ciona intestinalis]
          Length = 1029

 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/174 (33%), Positives = 91/174 (52%), Gaps = 5/174 (2%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +VQV+   +H+ F+  +G +++ G N+    G  D +    RP +  +LKG+P  Q++AG
Sbjct: 130 IVQVACGHSHSLFLGSNGALWSAGSNNYGQLGFGDKSSTELRPLI--SLKGIPFSQISAG 187

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
              +  +T  G V   G N +GQLG GD +DR  P  +  L  + SV  I AG  +  A+
Sbjct: 188 FWHSFCVTHSGAVFCWGRNDNGQLGLGDCVDRNVPVLLKALRSL-SVKYICAGELHTAAL 246

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAI--QTFRRKGIHVVRVSAGDEHVV 336
           T +G V++FGS     LGHG    E  P +   + F   G  V +++ G +H V
Sbjct: 247 TLDGGVFTFGSNQFGQLGHGSSGPEPLPVSTPRKIFELMGNEVTQIACGAQHTV 300



 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 72/206 (34%), Positives = 107/206 (51%), Gaps = 22/206 (10%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQ----CVSFTRINFPSAAHVVQV 168
           +Q+  G  H+L + SN +++S GS+  G LG G +++      +S   I F       Q+
Sbjct: 131 VQVACGHSHSLFLGSNGALWSAGSNNYGQLGFGDKSSTELRPLISLKGIPFS------QI 184

Query: 169 SASENHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNF 227
           SA   H+  V  SG VF  G N +   G  D  +R +  P L++AL+ +  K + AG   
Sbjct: 185 SAGFWHSFCVTHSGAVFCWGRNDNGQLGLGDCVDRNV--PVLLKALRSLSVKYICAGELH 242

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRP----TPKSIAPLEEVGS-VVQIAAGPSYML 282
           T  LT+ G V T GSN  GQLGHG +   P    TP+ I   E +G+ V QIA G  + +
Sbjct: 243 TAALTLDGGVFTFGSNQFGQLGHGSSGPEPLPVSTPRKI--FELMGNEVTQIACGAQHTV 300

Query: 283 AVTGN-GVVYSFGSGSNFCLGHGEQH 307
              G  G VY+FG+ ++  LG+  +H
Sbjct: 301 CYVGKTGNVYTFGNNNHSQLGYIPKH 326



 Score = 43.5 bits (101), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 59/126 (46%), Gaps = 14/126 (11%)

Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH--GDTLDRPTPKSIAPLEEVGSVVQIAA 276
           K V        FL   G VHT G+  +  +GH  G T        ++ LE V  +V IA 
Sbjct: 34  KSVRVSRTIAVFLLEDGTVHTFGAE-NDNIGHSAGST-------KVSALETV-HIVDIAL 84

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
           G S++LA+   G VY +G      LG  + +    P+ I++   K   +V+V+ G  H +
Sbjct: 85  GDSHILAIDDKGKVYGWGGNDKDQLGWTDGNCYPSPKKIKSLSNK---IVQVACGHSHSL 141

Query: 337 ALDSSG 342
            L S+G
Sbjct: 142 FLGSNG 147


>gi|390360684|ref|XP_003729747.1| PREDICTED: uncharacterized protein LOC100892600 [Strongylocentrotus
           purpuratus]
          Length = 946

 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 60/192 (31%), Positives = 93/192 (48%), Gaps = 4/192 (2%)

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           +I  P+   + QV+ S  H A V     V++ G+ S    GH D + P   P  VEALKG
Sbjct: 70  KIELPTILKIRQVAVSRTHIALVTYERVVYSWGEGSKGQLGHGDLD-PRNVPTSVEALKG 128

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
               +V  G  F+ F +  G V TCG  + G LGHGD      P+ I  L  V  V  I+
Sbjct: 129 KSITRVACGAGFSVFGSDNGIVMTCGDGSTGCLGHGDYHSASRPRLIETLLSV-DVTSIS 187

Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
            GP +++ V  +G ++++G G +  LG G++ D  +P  ++   R  + +  V  G +  
Sbjct: 188 CGPEHVVGVGVDGEIFAWGKGKDGRLGLGDEEDFCEP--MEVTLRDPVFIQEVKCGVDGT 245

Query: 336 VALDSSGYVSLC 347
           + L   G +  C
Sbjct: 246 MFLTDMGCLLAC 257



 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 71/292 (24%), Positives = 106/292 (36%), Gaps = 74/292 (25%)

Query: 115 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+   R H  L++    V+S G    G LGHG    + V  T +       + +V+    
Sbjct: 81  QVAVSRTHIALVTYERVVYSWGEGSKGQLGHGDLDPRNVP-TSVEALKGKSITRVACGAG 139

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC--------------- 218
            + F   +G V TCGD S+ C GH D +    RPRL+E L  V                 
Sbjct: 140 FSVFGSDNGIVMTCGDGSTGCLGHGDYHS-ASRPRLIETLLSVDVTSISCGPEHVVGVGV 198

Query: 219 -------------------------------------KQVTAGLNFTGFLTIRGHVHTCG 241
                                                ++V  G++ T FLT  G +  CG
Sbjct: 199 DGEIFAWGKGKDGRLGLGDEEDFCEPMEVTLRDPVFIQEVKCGVDGTMFLTDMGCLLACG 258

Query: 242 SNTHGQLG----------------HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
           SN + +LG                  +   R  P ++  L +   V+ +  GP +   V 
Sbjct: 259 SNAYNKLGLNHRQGFLASMKNMFTKTEVEGRKVPTAVKALSKF-RVLDMVVGPHHSAVVV 317

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             G+VY FG   +  LG G       P  +QT   K I    V+ G+++ VA
Sbjct: 318 EPGLVYMFGKNQHGQLGFGNTKPREAPAQVQTMADKLIST--VACGEDYTVA 367



 Score = 45.4 bits (106), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 46/197 (23%), Positives = 78/197 (39%), Gaps = 18/197 (9%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I+ G  H + +  +  +F+ G    G LG G E   C     +       + +V    + 
Sbjct: 186 ISCGPEHVVGVGVDGEIFAWGKGKDGRLGLGDEEDFCEPM-EVTLRDPVFIQEVKCGVDG 244

Query: 175 AAFVLQSGQVFTCGDNSSFCCG--HRD----TNRPIFR---------PRLVEALKGVPCK 219
             F+   G +  CG N+    G  HR     + + +F          P  V+AL      
Sbjct: 245 TMFLTDMGCLLACGSNAYNKLGLNHRQGFLASMKNMFTKTEVEGRKVPTAVKALSKFRVL 304

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
            +  G + +  +   G V+  G N HGQLG G+T  R  P  +  + +   +  +A G  
Sbjct: 305 DMVVGPHHSAVVVEPGLVYMFGKNQHGQLGFGNTKPREAPAQVQTMAD-KLISTVACGED 363

Query: 280 YMLAVTGNGVVYSFGSG 296
           Y +A   +  +Y +G G
Sbjct: 364 YTVAGAMDNFLYLWGKG 380


>gi|111220973|ref|YP_711767.1| BNR repeat-containing protein [Frankia alni ACN14a]
 gi|111148505|emb|CAJ60176.1| BNR repeat domain protein (partial) [Frankia alni ACN14a]
          Length = 385

 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 75/237 (31%), Positives = 110/237 (46%), Gaps = 20/237 (8%)

Query: 106 IVETSAGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA- 163
           +V  + G  Q+  G YH++++ S+ +V++ G +L G LG G  T +     R   P +  
Sbjct: 37  VVGLTDGVTQVAAGGYHSVVLRSDGTVWTSGLNLNGELGDGTTTDR-----RTPGPVSGL 91

Query: 164 -HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
             + Q++A+ +    +   G V+  G NS    G   T R    P  V  L G+   QV 
Sbjct: 92  TGITQIAANSHFTLALRSDGTVWAWGANSYGQLGDGST-RGRNTPVQVSGLAGI--TQVD 148

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
           AG      L   G V   G N  GQ+G G T  R TP  ++ L     V QIAAG  + L
Sbjct: 149 AGAAHGLALRNDGTVWAWGDNEFGQVGDGSTTSRSTPTQVSGLT---GVTQIAAGGGHSL 205

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-HVVRVSAGDEHVVAL 338
            V G+G V+ +G   N  LG G   D     +    R  G+  V R++AG+ H +AL
Sbjct: 206 VVRGDGAVWGWGLNRNGQLGDGTTRD-----STTAVRAAGLTGVARIAAGETHSLAL 257



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 89/205 (43%), Gaps = 12/205 (5%)

Query: 140 GVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRD 199
           G LG G  TT+      +       V QV+A   H+  +   G V+T G N +   G   
Sbjct: 21  GALGDGSTTTRLTPVQVVGLTDG--VTQVAAGGYHSVVLRSDGTVWTSGLNLNGELGD-G 77

Query: 200 TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP 259
           T      P  V  L G+   Q+ A  +FT  L   G V   G+N++GQLG G T  R TP
Sbjct: 78  TTTDRRTPGPVSGLTGI--TQIAANSHFTLALRSDGTVWAWGANSYGQLGDGSTRGRNTP 135

Query: 260 KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
             ++ L     + Q+ AG ++ LA+  +G V+++G      +G G       P  +    
Sbjct: 136 VQVSGLA---GITQVDAGAAHGLALRNDGTVWAWGDNEFGQVGDGSTTSRSTPTQVSGL- 191

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYV 344
                V +++AG  H + +   G V
Sbjct: 192 ---TGVTQIAAGGGHSLVVRGDGAV 213



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 63/224 (28%), Positives = 89/224 (39%), Gaps = 31/224 (13%)

Query: 111 AGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           AG  Q+  G  H L + N  +V++ G +  G +G G  T++    T         V Q++
Sbjct: 142 AGITQVDAGAAHGLALRNDGTVWAWGDNEFGQVGDGSTTSRS---TPTQVSGLTGVTQIA 198

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG----L 225
           A   H+  V   G V+  G N +   G   T       R    L GV   ++ AG    L
Sbjct: 199 AGGGHSLVVRGDGAVWGWGLNRNGQLGDGTTRDSTTAVR-AAGLTGV--ARIAAGETHSL 255

Query: 226 NFTGFLTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG--------------- 269
              G   +  G V   G N+ GQLG     DR TP  I  L   G               
Sbjct: 256 ALLGGAGLSSGQVFAWGDNSSGQLGDRTRTDRVTPVRIPGLPPAGATTSAAQGSGAAQGP 315

Query: 270 -SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQP 312
            SV QIA G  + LA+  +G V+++G    + LG G +     P
Sbjct: 316 RSVTQIATGNLHSLALLSDGTVWAWG---RYPLGDGTETTRESP 356


>gi|344284964|ref|XP_003414234.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Loxodonta
           africana]
          Length = 1018

 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 62/205 (30%), Positives = 105/205 (51%), Gaps = 5/205 (2%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           ++ G+ H+L + +   VF+ G+   G LG G       +  ++   +   ++QVS    H
Sbjct: 78  LSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKELNFTPMKVKALAGIKIIQVSCGHYH 137

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           +  + Q GQVF+ G+NS    G          P+ V++L+G+P  QV AG   +  L++ 
Sbjct: 138 SLALSQDGQVFSWGNNSHGQLGLGKEFLSQESPQRVKSLEGIPLAQVAAGGAHSFALSLS 197

Query: 235 GHVHTCGSNTHGQL---GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           G     GSN  GQL   G+   +    P+SI  L+E+G VV I+ G  +   +T +G V+
Sbjct: 198 GTSFGWGSNNAGQLALSGNNVPVQSYKPRSIGALKELG-VVYISCGSEHTAVLTQDGKVF 256

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQ 316
           +FG  S+  LGHG   ++  P+ ++
Sbjct: 257 TFGDNSSGQLGHGPTAEKRGPQLVE 281



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 75/244 (30%), Positives = 116/244 (47%), Gaps = 27/244 (11%)

Query: 115 QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVV 166
           Q  +G  H+LL+ S+ +V +CG + CG LG         P   Q +    ++        
Sbjct: 25  QAASGERHSLLLLSDGTVHACGDNSCGQLGRRGVPHRKRPGLIQALETLNVDL------- 77

Query: 167 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
            +S  + H+  V   G+VF  G  S    G  +     F P  V+AL G+   QV+ G  
Sbjct: 78  -LSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKELNFTPMKVKALAGIKIIQVSCGHY 136

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            +  L+  G V + G+N+HGQLG G + L + +P+ +  LE +  + Q+AAG ++  A++
Sbjct: 137 HSLALSQDGQVFSWGNNSHGQLGLGKEFLSQESPQRVKSLEGI-PLAQVAAGGAHSFALS 195

Query: 286 GNGVVYSFGSGSN----FCL-GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            +G   SFG GSN      L G+       +PR+I   +  G  VV +S G EH   L  
Sbjct: 196 LSGT--SFGWGSNNAGQLALSGNNVPVQSYKPRSIGALKELG--VVYISCGSEHTAVLTQ 251

Query: 341 SGYV 344
            G V
Sbjct: 252 DGKV 255



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 62/187 (33%), Positives = 92/187 (49%), Gaps = 6/187 (3%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++ G YH+L +S +  VFS G++  G LG G E     S  R+       + QV+A  
Sbjct: 129 IQVSCGHYHSLALSQDGQVFSWGNNSHGQLGLGKEFLSQESPQRVKSLEGIPLAQVAAGG 188

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPI--FRPRLVEALKGVPCKQVTAGLNFTGF 230
            H+  +  SG  F  G N++        N P+  ++PR + ALK +    ++ G   T  
Sbjct: 189 AHSFALSLSGTSFGWGSNNAGQLALSGNNVPVQSYKPRSIGALKELGVVYISCGSEHTAV 248

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA-VTGNGV 289
           LT  G V T G N+ GQLGHG T ++  P+ +  ++  G V QI  G  + L  V     
Sbjct: 249 LTQDGKVFTFGDNSSGQLGHGPTAEKRGPQLVEGID--GLVSQIDCGSYHTLVYVYTTRQ 306

Query: 290 VYSFGSG 296
           V SFG G
Sbjct: 307 VISFGRG 313



 Score = 72.0 bits (175), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 54/182 (29%), Positives = 97/182 (53%), Gaps = 6/182 (3%)

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           A + Q ++ E H+  +L  G V  CGDNS    G R       RP L++AL+ +    ++
Sbjct: 21  AELRQAASGERHSLLLLSDGTVHACGDNSCGQLGRRGVPHRK-RPGLIQALETLNVDLLS 79

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYM 281
            G   +  +  +G V   G+ + GQLG G+  +   TP  +  L  +  ++Q++ G  + 
Sbjct: 80  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKELNFTPMKVKALAGI-KIIQVSCGHYHS 138

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           LA++ +G V+S+G+ S+  LG G++   +  P+ +++   +GI + +V+AG  H  AL  
Sbjct: 139 LALSQDGQVFSWGNNSHGQLGLGKEFLSQESPQRVKSL--EGIPLAQVAAGGAHSFALSL 196

Query: 341 SG 342
           SG
Sbjct: 197 SG 198



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/134 (35%), Positives = 66/134 (49%), Gaps = 2/134 (1%)

Query: 211 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 270
           EA  G   +Q  +G   +  L   G VH CG N+ GQLG      R  P  I  LE + +
Sbjct: 16  EAAGGAELRQAASGERHSLLLLSDGTVHACGDNSCGQLGRRGVPHRKRPGLIQALETL-N 74

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V  ++ G  + LAV   G V+++G+GS   LG GE   EL    ++     GI +++VS 
Sbjct: 75  VDLLSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGE-FKELNFTPMKVKALAGIKIIQVSC 133

Query: 331 GDEHVVALDSSGYV 344
           G  H +AL   G V
Sbjct: 134 GHYHSLALSQDGQV 147


>gi|322795832|gb|EFZ18511.1| hypothetical protein SINV_14428 [Solenopsis invicta]
          Length = 786

 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 70/255 (27%), Positives = 119/255 (46%), Gaps = 20/255 (7%)

Query: 96  FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSF 154
            L+S++H           + +++G  H + +S+   V+S G    G LGHG +    VS+
Sbjct: 5   LLESIQH------VFIKKVAVSSGGKHCIALSSEGHVYSWGEGDDGKLGHGNK----VSY 54

Query: 155 TR---INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE 211
            R   I       +V ++   +H+A +  +G ++T G       GH D++  + RP++VE
Sbjct: 55  DRPKLIEDLLGVEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQL-RPKVVE 113

Query: 212 ALKGVPCKQVTAGLNFTGFL--TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 269
           AL+      V  G      L  T   +V + G   +G+LG G +     P  I  L  +G
Sbjct: 114 ALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLG 173

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
            VV++  G  + +A+T +G VY++G G    LGHG      +PR +     +G  ++ ++
Sbjct: 174 -VVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRKVAAL--QGKKIISIA 230

Query: 330 AGDEHVVALDSSGYV 344
            G  H VA    G V
Sbjct: 231 TGSLHCVACSDKGEV 245



 Score = 54.7 bits (130), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 77/167 (46%), Gaps = 4/167 (2%)

Query: 118 TGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL +++  +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 127 SGDAQTLCVTDDDNVWSWGDGDYGKLGRG-GSDGCKVPLKIDSLAGLGVVKVECGSQFSV 185

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + +SG V+T G       GH  T+  + RPR V AL+G     +  G       + +G 
Sbjct: 186 ALTRSGAVYTWGKGDYHRLGH-GTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGE 244

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           V T G N  GQLG G T     P+ +  L+    + ++A G ++ LA
Sbjct: 245 VFTWGDNDEGQLGDGTTSALHRPRLVHALQG-KKITRVACGSAHTLA 290


>gi|158286705|ref|XP_308885.4| AGAP006872-PA [Anopheles gambiae str. PEST]
 gi|157020595|gb|EAA04245.4| AGAP006872-PA [Anopheles gambiae str. PEST]
          Length = 792

 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 51/164 (31%), Positives = 83/164 (50%), Gaps = 2/164 (1%)

Query: 153 SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA 212
           S   ++ P    ++QV+    H   VL+ G V++ G+      GH         P  ++A
Sbjct: 400 SLAPLHLPPTIKIMQVATRGQHFVAVLEDGTVYSWGEGDKGQLGHDALETWHHIPMRIDA 459

Query: 213 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
           ++         G  F+ F T  G +  CG N++G LG G+      PK IA LE +  +V
Sbjct: 460 IRSRRIVGAAVGDGFSIFRTASGLLLACGDNSNGCLGQGNRASLLVPKQIAKLEHI-PIV 518

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAI 315
           Q+++G +++LA+T  G+VYS+GS  N  L  G++ H  L+P  I
Sbjct: 519 QVSSGTTHVLALTEGGIVYSWGSSDNGALALGKRIHIALEPERI 562



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 108/237 (45%), Gaps = 6/237 (2%)

Query: 114 MQITT-GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           MQ+ T G++   ++ + +V+S G    G LGH    T      RI+   +  +V  +  +
Sbjct: 413 MQVATRGQHFVAVLEDGTVYSWGEGDKGQLGHDALETWHHIPMRIDAIRSRRIVGAAVGD 472

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRP-IFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             + F   SG +  CGDNS+ C G    NR  +  P+ +  L+ +P  QV++G      L
Sbjct: 473 GFSIFRTASGLLLACGDNSNGCLGQ--GNRASLLVPKQIAKLEHIPIVQVSSGTTHVLAL 530

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           T  G V++ GS+ +G L  G  +     P+ I   + V +V ++ AGP   + +T  G  
Sbjct: 531 TEGGIVYSWGSSDNGALALGKRIHIALEPERIILPQLVQNVREVYAGPDCTILITTQGDC 590

Query: 291 YSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSL 346
           Y  GS +   LG G +       R +     K   +V VS  D H   L   G++ +
Sbjct: 591 YCCGSNAGNRLGLGRKVASTATLRMVHLDAAKRPKIVAVSVADTHAAFLIEGGFLVM 647



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 52/216 (24%), Positives = 93/216 (43%), Gaps = 18/216 (8%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG-- 188
           + +CG +  G LG G   +  V   +I       +VQVS+   H   + + G V++ G  
Sbjct: 484 LLACGDNSNGCLGQGNRASLLVP-KQIAKLEHIPIVQVSSGTTHVLALTEGGIVYSWGSS 542

Query: 189 DNSSFCCGHR-----DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           DN +   G R     +  R I  P+LV+ ++     +V AG + T  +T +G  + CGSN
Sbjct: 543 DNGALALGKRIHIALEPER-IILPQLVQNVR-----EVYAGPDCTILITTQGDCYCCGSN 596

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVG--SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 301
              +LG G  +       +  L+      +V ++   ++   +   G +   G  S    
Sbjct: 597 AGNRLGLGRKVASTATLRMVHLDAAKRPKIVAVSVADTHAAFLIEGGFLVMLGDNSGGQR 656

Query: 302 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           G G + +  QP  ++  + +  +VV V     + VA
Sbjct: 657 GAGHKFELAQPSIVRQLQSR--YVVNVKCNHSYTVA 690



 Score = 37.7 bits (86), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 2/70 (2%)

Query: 124 LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH--VVQVSASENHAAFVLQS 181
           L+ +    + CGS+    LG G +     +   ++  +A    +V VS ++ HAAF+++ 
Sbjct: 583 LITTQGDCYCCGSNAGNRLGLGRKVASTATLRMVHLDAAKRPKIVAVSVADTHAAFLIEG 642

Query: 182 GQVFTCGDNS 191
           G +   GDNS
Sbjct: 643 GFLVMLGDNS 652


>gi|195126363|ref|XP_002007640.1| GI13052 [Drosophila mojavensis]
 gi|193919249|gb|EDW18116.1| GI13052 [Drosophila mojavensis]
          Length = 1053

 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 109/239 (45%), Gaps = 14/239 (5%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI  G  HTL ++ S  V++CGS+    LGH   T + +    +       + Q++    
Sbjct: 40  QIACGHRHTLFLTASGKVYACGSNDYSQLGHELPTKRPLQIPEL---QDYVITQIACGSR 96

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  + + GQVF+ GDN     GH      +  P++V  L      Q+  G N +  LT 
Sbjct: 97  HSMALSEWGQVFSWGDNECGQLGHASDQDIVKLPKIVRNLVSKTVVQIACGSNHSLALTC 156

Query: 234 RGHVHTCGSNTHGQLG---HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            G +++ GSN +GQLG     D     TP  +  L  +  V  IA G ++   ++ +  V
Sbjct: 157 CGELYSWGSNLYGQLGVSSPNDLQQSNTPMRLTTLLGI-PVSAIACGGNHSFLISKSSAV 215

Query: 291 YSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSLC 347
             FG G N C  LG  ++ +   P  ++T R  G+    V+ GDE  V L   G V  C
Sbjct: 216 --FGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRF--VACGDEFSVFLTIEGGVFTC 270



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/229 (29%), Positives = 107/229 (46%), Gaps = 10/229 (4%)

Query: 115 QITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRI--NFPSAAHVVQVSAS 171
           QI  G  H++ +S    VFS G + CG LGH  +    V   +I  N  S   VVQ++  
Sbjct: 90  QIACGSRHSMALSEWGQVFSWGDNECGQLGHASDQ-DIVKLPKIVRNLVSKT-VVQIACG 147

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTN--RPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            NH+  +   G++++ G N     G    N  +    P  +  L G+P   +  G N + 
Sbjct: 148 SNHSLALTCCGELYSWGSNLYGQLGVSSPNDLQQSNTPMRLTTLLGIPVSAIACGGNHSF 207

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
            ++    V   G N  GQLG  D  +R  P  +  L  +G V  +A G  + + +T  G 
Sbjct: 208 LISKSSAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLG-VRFVACGDEFSVFLTIEGG 266

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           V++ G+G+   LGHG   +E+ PR +      G  + +V+ G+ H +AL
Sbjct: 267 VFTCGAGAYGQLGHGFSSNEMLPRMVMELM--GSTISQVACGNRHTLAL 313



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/195 (34%), Positives = 100/195 (51%), Gaps = 10/195 (5%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLG-HGP-ETTQCVSFTRINFPSAAHVVQVSA 170
           +QI  G  H+L L     ++S GS+L G LG   P +  Q  +  R+       V  ++ 
Sbjct: 142 VQIACGSNHSLALTCCGELYSWGSNLYGQLGVSSPNDLQQSNTPMRLTTLLGIPVSAIAC 201

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
             NH+  + +S  VF  G N+    G  D TNR    P  ++ L+ +  + V  G  F+ 
Sbjct: 202 GGNHSFLISKSSAVFGWGRNNCGQLGLNDETNRAY--PTQLKTLRTLGVRFVACGDEFSV 259

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGN 287
           FLTI G V TCG+  +GQLGHG + +   P+ +  +E +GS + Q+A G  + LA V   
Sbjct: 260 FLTIEGGVFTCGAGAYGQLGHGFSSNEMLPRMV--MELMGSTISQVACGNRHTLALVPSR 317

Query: 288 GVVYSFGSGSNFCLG 302
           G +Y FG GS+  LG
Sbjct: 318 GRIYGFGLGSSGQLG 332



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 68/220 (30%), Positives = 100/220 (45%), Gaps = 11/220 (5%)

Query: 130 SVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
            ++  G++  G LG G  E  Q ++ +RI +   + V Q++    H  F+  SG+V+ CG
Sbjct: 2   ELYCWGNASHGQLGLGGIEEEQILTPSRIPWKPDSAVNQIACGHRHTLFLTASGKVYACG 61

Query: 189 DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 248
            N     GH     P  RP  +  L+     Q+  G   +  L+  G V + G N  GQL
Sbjct: 62  SNDYSQLGHE---LPTKRPLQIPELQDYVITQIACGSRHSMALSEWGQVFSWGDNECGQL 118

Query: 249 GHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 307
           GH    D    PK +  L    +VVQIA G ++ LA+T  G +YS+GS     LG    +
Sbjct: 119 GHASDQDIVKLPKIVRNLVS-KTVVQIACGSNHSLALTCCGELYSWGSNLYGQLGVSSPN 177

Query: 308 DELQ---PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           D  Q   P  + T    GI V  ++ G  H   +  S  V
Sbjct: 178 DLQQSNTPMRLTTLL--GIPVSAIACGGNHSFLISKSSAV 215



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 68/149 (45%), Gaps = 4/149 (2%)

Query: 116 ITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G  H+ LIS SS VF  G + CG LG   ET +    T++       V  V+  +  
Sbjct: 199 IACGGNHSFLISKSSAVFGWGRNNCGQLGLNDETNRAYP-TQLKTLRTLGVRFVACGDEF 257

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFLTI 233
           + F+   G VFTCG  +    GH  ++  +  PR+V  L G    QV  G   T   +  
Sbjct: 258 SVFLTIEGGVFTCGAGAYGQLGHGFSSNEML-PRMVMELMGSTISQVACGNRHTLALVPS 316

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           RG ++  G  + GQLG  +T     P+ +
Sbjct: 317 RGRIYGFGLGSSGQLGTRNTKSLNLPQLV 345


>gi|449685230|ref|XP_004210847.1| PREDICTED: serine/threonine-protein kinase Nek9-like [Hydra
           magnipapillata]
          Length = 1020

 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 62/198 (31%), Positives = 104/198 (52%), Gaps = 20/198 (10%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNS-------SFCCGHRDTNRPIFR-PRLV 210
           F   +  ++VSA   H A V    +++T  +           C G    NR ++R P+ V
Sbjct: 479 FTGGSTAIEVSAGFCHFAVVTIEKELYTWANIQGGTEIVGQLCHG----NRAMYRTPKRV 534

Query: 211 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG----HGDTLDRPTPKSIAPLE 266
           +   G+P KQ   G +FT  LT  G V++CGS+ +G LG    +G  +   TP  I  L 
Sbjct: 535 DFFTGIPIKQAVCGEDFTIILTESGDVYSCGSDYYGCLGCEGIYGSNV--LTPIKIDALS 592

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
           ++  VV IA G  +++A+T  G VY++G+G +  LG G Q+D   P+ + T   K  ++V
Sbjct: 593 KL-KVVSIACGDCHVVALTNIGSVYTWGNGEHGRLGLGNQNDFNLPQLV-TLPEKYNYIV 650

Query: 327 RVSAGDEHVVALDSSGYV 344
           +++ G ++   L S+G++
Sbjct: 651 KITCGRDNTFILTSNGHL 668



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/164 (25%), Positives = 72/164 (43%), Gaps = 2/164 (1%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFC 194
           G+ + G L HG          R++F +   + Q    E+    + +SG V++CG +   C
Sbjct: 513 GTEIVGQLCHGNRAMYRTP-KRVDFFTGIPIKQAVCGEDFTIILTESGDVYSCGSDYYGC 571

Query: 195 CGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 253
            G        +  P  ++AL  +    +  G      LT  G V+T G+  HG+LG G+ 
Sbjct: 572 LGCEGIYGSNVLTPIKIDALSKLKVVSIACGDCHVVALTNIGSVYTWGNGEHGRLGLGNQ 631

Query: 254 LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            D   P+ +   E+   +V+I  G      +T NG + +FG+  
Sbjct: 632 NDFNLPQLVTLPEKYNYIVKITCGRDNTFILTSNGHLLAFGNNE 675



 Score = 47.0 bits (110), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 58/216 (26%), Positives = 94/216 (43%), Gaps = 33/216 (15%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLG-HGPETTQCVSFTRINFPSAAHVVQVSASE 172
           Q   G   T++++ S  V+SCGS   G LG  G   +  ++  +I+  S   VV ++  +
Sbjct: 544 QAVCGEDFTIILTESGDVYSCGSDYYGCLGCEGIYGSNVLTPIKIDALSKLKVVSIACGD 603

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK-----QVTAGLNF 227
            H   +   G V+T G+      G  + N     P+LV     +P K     ++T G + 
Sbjct: 604 CHVVALTNIGSVYTWGNGEHGRLGLGNQN-DFNLPQLV----TLPEKYNYIVKITCGRDN 658

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTL------DR------------PTPKSIAPLEEVG 269
           T  LT  GH+   G+N   +L    T+      D+            PTP  + PL    
Sbjct: 659 TFILTSNGHLLAFGNNECNKLALNQTISFKGNTDKSSTQQKVSYVTLPTP--VRPLRSY- 715

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
            +V +A+G S+   V   G + +FGS +   LG G+
Sbjct: 716 RIVSMASGKSHSAVVDEFGRLLTFGSNTFGELGLGD 751



 Score = 44.7 bits (104), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 48/215 (22%), Positives = 86/215 (40%), Gaps = 36/215 (16%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA-------HV 165
           + I  G  H + ++N  SV++ G+   G LG G +          N P          ++
Sbjct: 597 VSIACGDCHVVALTNIGSVYTWGNGEHGRLGLGNQND-------FNLPQLVTLPEKYNYI 649

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPI-FR-----------------P 207
           V+++   ++   +  +G +   G+N    C     N+ I F+                 P
Sbjct: 650 VKITCGRDNTFILTSNGHLLAFGNNE---CNKLALNQTISFKGNTDKSSTQQKVSYVTLP 706

Query: 208 RLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE 267
             V  L+      + +G + +  +   G + T GSNT G+LG GD   R  P  ++ L  
Sbjct: 707 TPVRPLRSYRIVSMASGKSHSAVVDEFGRLLTFGSNTFGELGLGDYQSRNFPSLVSGLLN 766

Query: 268 VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
              V     G ++ +  T +  ++S+G G N  LG
Sbjct: 767 GKEVTICNCGDNFTVVATADNQIFSWGCGENGRLG 801


>gi|2244793|emb|CAB10216.1| disease resistance N like protein [Arabidopsis thaliana]
 gi|7268142|emb|CAB78479.1| disease resistance N like protein [Arabidopsis thaliana]
          Length = 1996

 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/236 (28%), Positives = 110/236 (46%), Gaps = 20/236 (8%)

Query: 114  MQITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
            + +  G +H+ L  +N  +F+ G    GVLGHG    + VS+ + +   S    ++V+  
Sbjct: 1312 LSVACGTWHSALATANGKLFTFGDGAFGVLGHGDR--ESVSYPKEVKMLSGLKTLKVACG 1369

Query: 172  ENHAAFVLQ----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
              H   +++          S ++FT GD      GH +    +  P  V +L      Q+
Sbjct: 1370 VWHTVAIVEVMNQTGTSTSSRKLFTWGDGDKNRLGHGNKETYLL-PTCVSSLIDYNFNQI 1428

Query: 222  TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSY 280
              G  FT  LT  GHV T G  +HGQLG  ++ D   P  +     VG  V+ I+ G  +
Sbjct: 1429 ACGHTFTVALTTSGHVFTMGGTSHGQLGSSNS-DGKLP-CLVQDRLVGEFVEEISCGDHH 1486

Query: 281  MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
            +  +T    V+++G GSN  LGHG++ D   P  ++  R +  HV  +S G +  V
Sbjct: 1487 VAVLTSRSEVFTWGKGSNGRLGHGDKDDRKTPTLVEALRER--HVKSISCGADQSV 1540



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 71/243 (29%), Positives = 113/243 (46%), Gaps = 19/243 (7%)

Query: 116  ITTGRYHTLLISNS-SVFSCGSSL--CGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
            +  G YHT  +S S  +F+ G  +   G+LGHG + +  +   R++ P     V+ V+  
Sbjct: 1259 VACGEYHTCAVSTSGDLFTWGDGIHNVGLLGHGSDLSHWIP-KRVSGPVEGLQVLSVACG 1317

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG------- 224
              H+A    +G++FT GD +    GH D    +  P+ V+ L G+   +V  G       
Sbjct: 1318 TWHSALATANGKLFTFGDGAFGVLGHGD-RESVSYPKEVKMLSGLKTLKVACGVWHTVAI 1376

Query: 225  ---LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
               +N TG  T    + T G     +LGHG+      P  ++ L +  +  QIA G ++ 
Sbjct: 1377 VEVMNQTGTSTSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDY-NFNQIACGHTFT 1435

Query: 282  LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
            +A+T +G V++ G  S+  LG      +L P  +Q  R  G  V  +S GD HV  L S 
Sbjct: 1436 VALTTSGHVFTMGGTSHGQLGSSNSDGKL-PCLVQD-RLVGEFVEEISCGDHHVAVLTSR 1493

Query: 342  GYV 344
              V
Sbjct: 1494 SEV 1496



 Score = 72.0 bits (175), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 51/175 (29%), Positives = 82/175 (46%), Gaps = 5/175 (2%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            + ++    H A V + G+VFT  + +    GH      + RP+LVE L       V  G 
Sbjct: 1205 IDIACGVRHIALVTRQGEVFTWEEEAGGRLGH-GIQVDVCRPKLVEFLALTNIDFVACGE 1263

Query: 226  NFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
              T  ++  G + T G   H  G LGHG  L    PK ++   E   V+ +A G  +   
Sbjct: 1264 YHTCAVSTSGDLFTWGDGIHNVGLLGHGSDLSHWIPKRVSGPVEGLQVLSVACGTWHSAL 1323

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             T NG +++FG G+   LGHG++     P+ ++     G+  ++V+ G  H VA+
Sbjct: 1324 ATANGKLFTFGDGAFGVLGHGDRESVSYPKEVKML--SGLKTLKVACGVWHTVAI 1376



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/259 (24%), Positives = 109/259 (42%), Gaps = 31/259 (11%)

Query: 106  IVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRI 157
            +V ++   + I  G  H  L++    VF+      G LGHG       P+  + ++ T I
Sbjct: 1197 VVNSTTVKIDIACGVRHIALVTRQGEVFTWEEEAGGRLGHGIQVDVCRPKLVEFLALTNI 1256

Query: 158  NFPSAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKG 215
            +F        V+  E H   V  SG +FT GD  ++    GH          R+   ++G
Sbjct: 1257 DF--------VACGEYHTCAVSTSGDLFTWGDGIHNVGLLGHGSDLSHWIPKRVSGPVEG 1308

Query: 216  VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
            +    V  G   +   T  G + T G    G LGHGD      PK +  L  + + +++A
Sbjct: 1309 LQVLSVACGTWHSALATANGKLFTFGDGAFGVLGHGDRESVSYPKEVKMLSGLKT-LKVA 1367

Query: 276  AGPSYMLAV----------TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
             G  + +A+          T +  ++++G G    LGHG +   L P  + +      + 
Sbjct: 1368 CGVWHTVAIVEVMNQTGTSTSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFN- 1426

Query: 326  VRVSAGDEHVVALDSSGYV 344
             +++ G    VAL +SG+V
Sbjct: 1427 -QIACGHTFTVALTTSGHV 1444


>gi|376260724|ref|YP_005147444.1| RCC1 domain-containing protein, alpha-tubulin suppressor
           [Clostridium sp. BNL1100]
 gi|373944718|gb|AEY65639.1| RCC1 domain-containing protein, alpha-tubulin suppressor
           [Clostridium sp. BNL1100]
          Length = 985

 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 62/230 (26%), Positives = 111/230 (48%), Gaps = 14/230 (6%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I+ G+Y+++ L S+ +V++ G +  G LG G   T+    + +   + + ++ +S+  +H
Sbjct: 230 ISAGKYYSMALKSDGTVWTWGENDYGQLGDGTTATR---LSPVQVQNLSGIIAISSGNSH 286

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           +  +   G V+  GDN S   G   TN   + P  V+ L G+    ++ G  ++  L   
Sbjct: 287 SLALKDDGTVWAWGDNESGQLGDGTTNSK-YIPSQVQGLSGIVS--ISCGFYYSMALKND 343

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G V   G NT GQLG G T DR T     P+  +  V+ IA G ++ +A+  +G V+++G
Sbjct: 344 GTVWVWGDNTSGQLGDGTTTDRNTA---VPVSGLDGVIAIACGVNHSMALRNDGTVWTWG 400

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             +   LG G +  +     I         ++ ++ G  H +AL   G V
Sbjct: 401 FNAFGQLGDGTKVSKNTAVPISGLD----GIIAITCGTSHSMALKDDGTV 446



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/180 (29%), Positives = 90/180 (50%), Gaps = 10/180 (5%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +++VS  E+H   +   G V+ CG+N     G+ +T   I  P  VE L  V    ++AG
Sbjct: 177 IIKVSGGESHTLALESDGTVWACGENDYGQLGNNNT-IDINSPIPVEGLNKV--SSISAG 233

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             ++  L   G V T G N +GQLG G T  R +P     ++ +  ++ I++G S+ LA+
Sbjct: 234 KYYSMALKSDGTVWTWGENDYGQLGDGTTATRLSP---VQVQNLSGIIAISSGNSHSLAL 290

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             +G V+++G   +  LG G  + +  P  +Q        +V +S G  + +AL + G V
Sbjct: 291 KDDGTVWAWGDNESGQLGDGTTNSKYIPSQVQGLS----GIVSISCGFYYSMALKNDGTV 346



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 65/128 (50%), Gaps = 7/128 (5%)

Query: 217 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
           P  +V+ G + T  L   G V  CG N +GQLG+ +T+D  +P    P+E +  V  I+A
Sbjct: 176 PIIKVSGGESHTLALESDGTVWACGENDYGQLGNNNTIDINSP---IPVEGLNKVSSISA 232

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
           G  Y +A+  +G V+++G      LG G     L P  +Q        ++ +S+G+ H +
Sbjct: 233 GKYYSMALKSDGTVWTWGENDYGQLGDGTTATRLSPVQVQNLS----GIIAISSGNSHSL 288

Query: 337 ALDSSGYV 344
           AL   G V
Sbjct: 289 ALKDDGTV 296



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 60/222 (27%), Positives = 100/222 (45%), Gaps = 24/222 (10%)

Query: 112 GNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
           G + IT G  H++ L  + +V++ G +  G LG+G         T I+  + + V  +S 
Sbjct: 426 GIIAITCGTSHSMALKDDGTVWAWGDNQYGQLGNG---------TFISNTTPSQVSNLSG 476

Query: 171 SEN-----HAAFVLQ-SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
            ++       +F L+  G V+  G+N     G   T R I+     E L     K ++ G
Sbjct: 477 IKSIFCGYSTSFALKPDGTVWAWGNNEYGELGKGFTTRVIYP---TETLNIGDIKAISIG 533

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
            +    L   G V   G N +GQLG G T  +  P  ++ +     +  I+AG S+ LA+
Sbjct: 534 SSHCLALKNDGTVWAWGDNRYGQLGDGTTTIKSLPVQVSGIS---GITAISAGGSHSLAL 590

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
             +G V+++G  +   LG G + D   P  +Q     GI V+
Sbjct: 591 KSDGTVWAWGQNNVGQLGDGTKEDRNTP--VQVSELSGITVI 630



 Score = 58.5 bits (140), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 63/245 (25%), Positives = 107/245 (43%), Gaps = 26/245 (10%)

Query: 107 VETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV 165
           V+  +G + I+ G Y+++ + N  +V+  G +  G LG G  T +    T +       V
Sbjct: 321 VQGLSGIVSISCGFYYSMALKNDGTVWVWGDNTSGQLGDGTTTDRN---TAVPVSGLDGV 377

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-----RDTNRPIFRPRLVEALKGVPCKQ 220
           + ++   NH+  +   G V+T G N+    G      ++T  PI        L G+    
Sbjct: 378 IAIACGVNHSMALRNDGTVWTWGFNAFGQLGDGTKVSKNTAVPI------SGLDGIIA-- 429

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           +T G + +  L   G V   G N +GQLG+G  +   TP  ++ L  + S   I  G S 
Sbjct: 430 ITCGTSHSMALKDDGTVWAWGDNQYGQLGNGTFISNTTPSQVSNLSGIKS---IFCGYST 486

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALD 339
             A+  +G V+++G+       +GE       R I       I  ++ +S G  H +AL 
Sbjct: 487 SFALKPDGTVWAWGNNE-----YGELGKGFTTRVIYPTETLNIGDIKAISIGSSHCLALK 541

Query: 340 SSGYV 344
           + G V
Sbjct: 542 NDGTV 546



 Score = 46.6 bits (109), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 49/197 (24%), Positives = 84/197 (42%), Gaps = 15/197 (7%)

Query: 111 AGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G + I  G YH L + N  +V++ G +  G  G G  TT  +    +     + V  ++
Sbjct: 671 SGIIAIECGTYHNLALKNDGTVWAWGKNNFGQFGDGTTTTTNIP---VQVSGLSGVKAIA 727

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              N +  +   G V+  G           T       R V+ L  +    V+   N   
Sbjct: 728 VGGNRSIALKSDGTVWQWG--RILVSVSPSTVETWTTARQVDGLSEI----VSISNNVA- 780

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
            L   G V T G+N +GQLG G T  R T   +AP+  +  V  +A+  +  + +  +G 
Sbjct: 781 -LKNDGKVFTWGANDYGQLGDGTTTARVT---VAPVSGLEGVAGVASSDTTSMVLMNDGT 836

Query: 290 VYSFGSGSNFCLGHGEQ 306
           + ++G  +   LG+GE+
Sbjct: 837 IRAWGKNNFGQLGNGER 853



 Score = 39.7 bits (91), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 50/223 (22%), Positives = 83/223 (37%), Gaps = 50/223 (22%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I+ G  H L + N  +V++ G +  G LG G  T + +    +     + +  +SA  +H
Sbjct: 530 ISIGSSHCLALKNDGTVWAWGDNRYGQLGDGTTTIKSLP---VQVSGISGITAISAGGSH 586

Query: 175 AAFVLQSGQVFTCGDNSSFCCG---HRDTNRPIFRPRLVE------------ALKG---- 215
           +  +   G V+  G N+    G     D N P+    L              ALK     
Sbjct: 587 SLALKSDGTVWAWGQNNVGQLGDGTKEDRNTPVQVSELSGITVISNCIYRSFALKNDGTV 646

Query: 216 ---------VPCKQVTAGLNFTGF---------------LTIRGHVHTCGSNTHGQLGHG 251
                    +P +++T  +  +G                L   G V   G N  GQ G G
Sbjct: 647 WVWGSDSYNLPLEKMTMPIQISGLSGIIAIECGTYHNLALKNDGTVWAWGKNNFGQFGDG 706

Query: 252 DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
            T     P  ++ L  V +   IA G +  +A+  +G V+ +G
Sbjct: 707 TTTTTNIPVQVSGLSGVKA---IAVGGNRSIALKSDGTVWQWG 746


>gi|296189286|ref|XP_002742716.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 3
           [Callithrix jacchus]
          Length = 556

 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/218 (30%), Positives = 97/218 (44%), Gaps = 4/218 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  +F  G++ CG LG G +    +   R++  S   +  +S  S  H       G+VFT
Sbjct: 69  NDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFT 127

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN  +    +   L      +V  G   +  LT  G V   G N  G
Sbjct: 128 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 187

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T+++PTP+ +    +   VV IA G    +AV  +G VY +G   N  LG G  
Sbjct: 188 QVGSGSTVNQPTPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGNGQLGLGNS 247

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            +  QP   +    +GI V RV+ G  H + L   G V
Sbjct: 248 GN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQV 283



 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 57/187 (30%), Positives = 92/187 (49%), Gaps = 12/187 (6%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G YH+L L S+  VF+ G +  G +G G    Q              VV ++  +
Sbjct: 160 IEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPTPRRVTGCLQNKVVVTIACGQ 219

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
                V+ SG+V+  G N +   G  ++ N+P   P  V AL+G+  ++V  G   T  L
Sbjct: 220 MCCMAVVDSGEVYVWGYNGNGQLGLGNSGNQPT--PCRVAALQGIRVQRVACGYAHTLVL 277

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDR--PTPKSIAPLEEVGSVVQIAAGPS--YMLAVTGN 287
           T  G V+  G+N++GQLG G+  ++  PTP ++    E   +++IAA  S     A T  
Sbjct: 278 TDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTV----EKDRIIEIAACHSTHTSAAKTQG 333

Query: 288 GVVYSFG 294
           G VY +G
Sbjct: 334 GHVYMWG 340



 Score = 39.7 bits (91), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 53/116 (45%), Gaps = 3/116 (2%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE-EVGSVVQIAAGPSYMLAVTGNG 288
           + T+   +   G+N  G LG GD      P+ +  L  +  + +   +GP  +LA T  G
Sbjct: 65  YTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATT-EG 123

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            V+++G  +   LG+G  +  L P  I T       V+ V+ G  H + L S G V
Sbjct: 124 EVFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVIEVACGSYHSLVLTSDGEV 178


>gi|90399178|emb|CAJ86040.1| H0723C07.10 [Oryza sativa Indica Group]
          Length = 1082

 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/177 (33%), Positives = 90/177 (50%), Gaps = 7/177 (3%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  V+    HAA V +  +VFT G+  S   GH      IF+PRLVE+L     + +  G
Sbjct: 288 VSYVACGVKHAALVTRQAEVFTWGEECSGRLGH-GAGTSIFQPRLVESLSICNVETIACG 346

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
              T  +T  G ++T G  TH  G LGHG  +    PK ++ PLE +  V  ++ G  + 
Sbjct: 347 EFHTCAITATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSGPLEGL-QVSAVSCGTWHT 405

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             +T +G +Y+FG G+   LGHG +     P+ +++   KG+  + VS G  H  A+
Sbjct: 406 ALITSSGKLYTFGDGTFGVLGHGNRETISYPKEVESL--KGLRTISVSCGVWHTAAV 460



 Score = 80.9 bits (198), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 112/227 (49%), Gaps = 15/227 (6%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           ++ G +HT LI++S  +++ G    GVLGHG   T  +S+ + +        + VS    
Sbjct: 398 VSCGTWHTALITSSGKLYTFGDGTFGVLGHGNRET--ISYPKEVESLKGLRTISVSCGVW 455

Query: 174 HAAFVLQ---------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           H A V++         SG++FT GD   +  GH D +  + +P  V +L      +   G
Sbjct: 456 HTAAVVEVIMAQSNTSSGKLFTWGDGDKYRLGHGDRSSKL-KPTCVPSLIDYNFHKAVCG 514

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
              T  LT  GH+ T GS+ +GQLG+ +   R  P+ +      G VV++  G  ++  +
Sbjct: 515 HTLTIGLTTSGHIFTAGSSVYGQLGNPNNDGR-YPRLVEEKLGGGGVVEVVCGAYHVAVL 573

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
           T +G VY++G G+N  LGHG+  D   P  ++  R + +  +   +G
Sbjct: 574 TQSGEVYTWGKGANGRLGHGDIADRKTPTFVEALRDRSVKRIACGSG 620



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/236 (24%), Positives = 106/236 (44%), Gaps = 15/236 (6%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           ++  L+   + VF+ G    G LGHG  T+       +   S  +V  ++  E H   + 
Sbjct: 296 KHAALVTRQAEVFTWGEECSGRLGHGAGTS-IFQPRLVESLSICNVETIACGEFHTCAIT 354

Query: 180 QSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
            +G ++T GD  +++   GH          R+   L+G+    V+ G   T  +T  G +
Sbjct: 355 ATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSGPLEGLQVSAVSCGTWHTALITSSGKL 414

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV---------TGNG 288
           +T G  T G LGHG+      PK +  L+ +   + ++ G  +  AV         T +G
Sbjct: 415 YTFGDGTFGVLGHGNRETISYPKEVESLKGL-RTISVSCGVWHTAAVVEVIMAQSNTSSG 473

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            ++++G G  + LGHG++  +L+P  + +      H  +   G    + L +SG++
Sbjct: 474 KLFTWGDGDKYRLGHGDRSSKLKPTCVPSLIDYNFH--KAVCGHTLTIGLTTSGHI 527



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 65/141 (46%), Gaps = 4/141 (2%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           I  P+ +E+   +    V  G+     +T +  V T G    G+LGHG       P+ + 
Sbjct: 274 ILVPKPLESNVMLDVSYVACGVKHAALVTRQAEVFTWGEECSGRLGHGAGTSIFQPRLVE 333

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRK 321
            L  + +V  IA G  +  A+T  G +Y++G G++    LGHG       P+ + +   +
Sbjct: 334 SL-SICNVETIACGEFHTCAITATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRV-SGPLE 391

Query: 322 GIHVVRVSAGDEHVVALDSSG 342
           G+ V  VS G  H   + SSG
Sbjct: 392 GLQVSAVSCGTWHTALITSSG 412


>gi|296189284|ref|XP_002742715.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
           [Callithrix jacchus]
          Length = 577

 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/218 (30%), Positives = 97/218 (44%), Gaps = 4/218 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  +F  G++ CG LG G +    +   R++  S   +  +S  S  H       G+VFT
Sbjct: 90  NDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFT 148

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN  +    +   L      +V  G   +  LT  G V   G N  G
Sbjct: 149 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 208

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T+++PTP+ +    +   VV IA G    +AV  +G VY +G   N  LG G  
Sbjct: 209 QVGSGSTVNQPTPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGNGQLGLGNS 268

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            +  QP   +    +GI V RV+ G  H + L   G V
Sbjct: 269 GN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQV 304



 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 57/187 (30%), Positives = 92/187 (49%), Gaps = 12/187 (6%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G YH+L L S+  VF+ G +  G +G G    Q              VV ++  +
Sbjct: 181 IEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPTPRRVTGCLQNKVVVTIACGQ 240

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
                V+ SG+V+  G N +   G  ++ N+P   P  V AL+G+  ++V  G   T  L
Sbjct: 241 MCCMAVVDSGEVYVWGYNGNGQLGLGNSGNQPT--PCRVAALQGIRVQRVACGYAHTLVL 298

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDR--PTPKSIAPLEEVGSVVQIAAGPS--YMLAVTGN 287
           T  G V+  G+N++GQLG G+  ++  PTP ++    E   +++IAA  S     A T  
Sbjct: 299 TDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTV----EKDRIIEIAACHSTHTSAAKTQG 354

Query: 288 GVVYSFG 294
           G VY +G
Sbjct: 355 GHVYMWG 361



 Score = 39.3 bits (90), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 53/116 (45%), Gaps = 3/116 (2%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE-EVGSVVQIAAGPSYMLAVTGNG 288
           + T+   +   G+N  G LG GD      P+ +  L  +  + +   +GP  +LA T  G
Sbjct: 86  YTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATT-EG 144

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            V+++G  +   LG+G  +  L P  I T       V+ V+ G  H + L S G V
Sbjct: 145 EVFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVIEVACGSYHSLVLTSDGEV 199


>gi|403356078|gb|EJY77629.1| Hect E3 ubiquitin ligase [Oxytricha trifallax]
          Length = 1178

 Score = 82.8 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 73/274 (26%), Positives = 121/274 (44%), Gaps = 46/274 (16%)

Query: 112 GNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHG-----PETTQCVSFTR----INFPS 161
           G  Q+  G  HT+ +    +V+S G+S CG LG       P   +   +      I    
Sbjct: 24  GIYQVAGGDGHTVAVDIKGNVYSWGASACGQLGLASMKDLPTDVEGYPYQPTPRIIELLQ 83

Query: 162 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN-----------RPIFRPRLV 210
           +  V+Q++  + H   + Q G++++ G       GH DT+           +P  +P+L+
Sbjct: 84  SVKVIQIACGDAHTVALTQDGKLYSWGGGGCGQLGHPDTSAMPKDEDGCPYQP--KPKLI 141

Query: 211 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD----------RPTPK 260
             LK +  KQV  G   T  +   GH+++ G+   GQLGH DT            +P P+
Sbjct: 142 VVLKNLEVKQVACGKAHTVAVLNNGHLYSWGAGACGQLGHPDTSSFPADEDGYPYQPIPR 201

Query: 261 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQ-------- 311
            +  L+    ++  + G  + + +T  G +Y FG GS   LG G      L         
Sbjct: 202 CVTALKPF-KLIHASCGDVHTMVLTDQGEIYCFGGGSCGQLGFGNISQMPLDVDSCPFMP 260

Query: 312 -PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            P+ I++   +GI +V +S GD H +AL   G+V
Sbjct: 261 VPKKIESL--QGIFIVSLSCGDSHSMALSREGHV 292



 Score = 68.6 bits (166), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 59/234 (25%), Positives = 107/234 (45%), Gaps = 48/234 (20%)

Query: 115 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETT---------------QCVSFTRIN 158
           Q+  G+ HT+ +++N  ++S G+  CG LGH P+T+               +CV+  +  
Sbjct: 151 QVACGKAHTVAVLNNGHLYSWGAGACGQLGH-PDTSSFPADEDGYPYQPIPRCVTALK-- 207

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR-----------PIFRP 207
                 ++  S  + H   +   G+++  G  S    G  + ++           P+  P
Sbjct: 208 ---PFKLIHASCGDVHTMVLTDQGEIYCFGGGSCGQLGFGNISQMPLDVDSCPFMPV--P 262

Query: 208 RLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD----------RP 257
           + +E+L+G+    ++ G + +  L+  GHV+  G  T+GQLG  D  D          +P
Sbjct: 263 KKIESLQGIFIVSLSCGDSHSMALSREGHVYAWGEATYGQLGLDDIRDLPKNTDNKPYQP 322

Query: 258 TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ 311
            P+ +  L     +V I+ G ++ LA+T  G +YSF  G N C   G+   EL+
Sbjct: 323 FPQKVVALMN-KKIVAISCGETHTLALTEGGHLYSF--GGNTCGQLGQYVKELE 373



 Score = 54.3 bits (129), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 48/156 (30%), Positives = 79/156 (50%), Gaps = 19/156 (12%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD----------R 256
           P  ++ L+     QV  G   T  + I+G+V++ G++  GQLG     D          +
Sbjct: 14  PLEIDMLRNKGIYQVAGGDGHTVAVDIKGNVYSWGASACGQLGLASMKDLPTDVEGYPYQ 73

Query: 257 PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ----HDE--- 309
           PTP+ I  L+ V  V+QIA G ++ +A+T +G +YS+G G    LGH +      DE   
Sbjct: 74  PTPRIIELLQSV-KVIQIACGDAHTVALTQDGKLYSWGGGGCGQLGHPDTSAMPKDEDGC 132

Query: 310 -LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             QP+       K + V +V+ G  H VA+ ++G++
Sbjct: 133 PYQPKPKLIVVLKNLEVKQVACGKAHTVAVLNNGHL 168


>gi|440796662|gb|ELR17771.1| protein kinase domain containing protein [Acanthamoeba castellanii
           str. Neff]
          Length = 972

 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 73/264 (27%), Positives = 112/264 (42%), Gaps = 26/264 (9%)

Query: 88  GNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGP 146
           G W ++     + E     +E      QI  G  H++L+++   V++ G  + G LGHG 
Sbjct: 112 GEWGKLGHGGAANEQHPKQLEVQGKVTQIGVGDQHSVLLTDGGHVYTFGQGIYGQLGHG- 170

Query: 147 ETTQCVSFTRINFPSAAHVVQVSASEN---------HAAFVLQSGQVFTCGDNSSFCCGH 197
                   TR +      V  +  ++             F + +  V           GH
Sbjct: 171 --------TRKDLDRPKRVEALVRAQQTITSIGVGFDQTFAINADGVVHSWGRQGPWLGH 222

Query: 198 RDTNRPIFRPRLVEALKG-VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR 256
                 + +P+ V  LK      QV AG   T  LTI G V++ G N  G LG G T+ +
Sbjct: 223 AAQPDHVKQPQEVGLLKNKAKIMQVAAGKQHTLLLTIDGKVYSMGKNKDGCLGQGKTVKK 282

Query: 257 PT--PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRA 314
            T  P  I  L     + Q+AAG  + + +  +G V +FGSGSN  LGHG+  ++  PR 
Sbjct: 283 ETANPMPITSLNNY-VITQVAAGEKHSVVLASDGSVLTFGSGSNGRLGHGDTKNQDVPRT 341

Query: 315 IQTFRRKGIHVVRVSAGDEHVVAL 338
           +Q    K      ++AG EH + L
Sbjct: 342 VQGVFDK---ACAIAAGFEHTIVL 362



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 101/229 (44%), Gaps = 16/229 (6%)

Query: 123 TLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSG 182
           T  + + + +S G    G LGHG    +              V Q+   + H+  +   G
Sbjct: 98  TTAVEDGTAYSFGQGEWGKLGHGGAANEQHP---KQLEVQGKVTQIGVGDQHSVLLTDGG 154

Query: 183 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ----VTAGLNFTGFLTIRGHVH 238
            V+T G       GH  T + + RP+ VEAL  V  +Q    +  G + T  +   G VH
Sbjct: 155 HVYTFGQGIYGQLGH-GTRKDLDRPKRVEAL--VRAQQTITSIGVGFDQTFAINADGVVH 211

Query: 239 TCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           + G      LGH    D    P+ +  L+    ++Q+AAG  + L +T +G VYS G   
Sbjct: 212 SWGRQGP-WLGHAAQPDHVKQPQEVGLLKNKAKIMQVAAGKQHTLLLTIDGKVYSMGKNK 270

Query: 298 NFCLGHGE--QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           + CLG G+  + +   P  I +       + +V+AG++H V L S G V
Sbjct: 271 DGCLGQGKTVKKETANPMPITSLNN--YVITQVAAGEKHSVVLASDGSV 317


>gi|338530520|ref|YP_004663854.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
 gi|337256616|gb|AEI62776.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
          Length = 1457

 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/199 (33%), Positives = 98/199 (49%), Gaps = 10/199 (5%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            +  G +H+L L+++ S+ + G++  G LG G  TT+   ++R+       VV+V A   H
Sbjct: 1261 VAGGDHHSLALLADGSLGAWGNNAAGQLGDGTGTTR---YSRVWVKGVDGVVEVRAGAAH 1317

Query: 175  AAFVLQSGQVFTCGDNS-SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
               +   G V+T GDN+ S      D+ R    PR V  L GV    + AG   +  +  
Sbjct: 1318 TLALRGDGTVWTWGDNTHSQLGAGDDSTRTRIVPRPVPGLSGVTA--IGAGARHSFAVGP 1375

Query: 234  RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            +G V   G N+HGQLG GD  +R  P  +  L EV SVV  + G  + LA+  +G V S+
Sbjct: 1376 KGTVWAWGRNSHGQLGLGDNANRAEPLRVKELAEV-SVV--SGGADFSLAMQRDGTVSSW 1432

Query: 294  GSGSNFCLGHGEQHDELQP 312
            GS  +  LG G       P
Sbjct: 1433 GSSLHGALGLGTAGQRSSP 1451



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 68/238 (28%), Positives = 107/238 (44%), Gaps = 16/238 (6%)

Query: 112  GNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
            G   ++ GR  +L +  + + ++ G++  G LG G   +Q V        S   V  +SA
Sbjct: 951  GVASVSAGRAFSLAVRQDGTAWAWGANPSGQLGDGTNHSQRVPK---QVTSVKRVRAMSA 1007

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
              +H   + + G V+T GDN+    G   +      PR V  L+ V  + V AG  F+  
Sbjct: 1008 GAHHVVALGEDGAVWTWGDNTLGQLGDGTSAPTWMWPRQVPELRDV--EAVAAGEQFSVA 1065

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI----APLEEVGSVVQIAAGPSYMLAVTG 286
            + + G  H  GSN +GQLG G T  R TP  +    + L +   V  + A   + +A+  
Sbjct: 1066 VLVGGGAHAWGSNEYGQLGDGKTGPRLTPVQVRIEASKLRQ--PVRTVRAWAQHAVALMA 1123

Query: 287  NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            +G V ++G  ++  LG G       P  ++        VV VS G  H +AL S G V
Sbjct: 1124 DGTVQAWGDNAHGQLGDGTTERRAAPVVVRGL----TGVVAVSTGAWHSLALRSDGTV 1177



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 74/253 (29%), Positives = 110/253 (43%), Gaps = 26/253 (10%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG---PETTQC- 151
            + + V    D+   +AG       ++   ++      + GS+  G LG G   P  T   
Sbjct: 1043 WPRQVPELRDVEAVAAGE------QFSVAVLVGGGAHAWGSNEYGQLGDGKTGPRLTPVQ 1096

Query: 152  --VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRL 209
              +  +++  P    V  V A   HA  ++  G V   GDN+    G   T R    P +
Sbjct: 1097 VRIEASKLRQP----VRTVRAWAQHAVALMADGTVQAWGDNAHGQLGDGTTERRAA-PVV 1151

Query: 210  VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 269
            V  L GV    V+ G   +  L   G V   G+N  GQLG G TL R TP  +A L++  
Sbjct: 1152 VRGLTGVVA--VSTGAWHSLALRSDGTVWAWGANGFGQLGDGTTLSRTTPVRVAGLQK-- 1207

Query: 270  SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
             VV I AG  + LAV  +G V+++G  +   LG G     L P  ++       +V  V+
Sbjct: 1208 -VVAIGAGGYHALAVRSDGSVWAWGYNAFGQLGDGTAESRLLPVRVEGLS----NVTSVA 1262

Query: 330  AGDEHVVALDSSG 342
             GD H +AL + G
Sbjct: 1263 GGDHHSLALLADG 1275



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 67/232 (28%), Positives = 108/232 (46%), Gaps = 18/232 (7%)

Query: 116  ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            + +G  H+L ++ + SV++ G++  G LG G   ++ +   R++    A  V      + 
Sbjct: 805  VASGVLHSLALACDGSVWAWGANGRGQLGDGTTASRVIP-ARVDGLQGAVAVAAGGDASL 863

Query: 175  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI- 233
            A  +L  G  +  G N+    G   T+      R V     +P   ++  L  T  L   
Sbjct: 864  A--LLADGTAWAWGANAHGQLGDGSTSD-----RAVPGQLKLPSNIMSVALGETHGLAAG 916

Query: 234  -RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G +   G+N  GQLG G T   PTP  +  LE V SV   +AG ++ LAV  +G  ++
Sbjct: 917  EDGALWAWGANGSGQLGEGSTTPSPTPVRVKGLEGVASV---SAGRAFSLAVRQDGTAWA 973

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            +G+  +  LG G  H +  P+ + + +R    V  +SAG  HVVAL   G V
Sbjct: 974  WGANPSGQLGDGTNHSQRVPKQVTSVKR----VRAMSAGAHHVVALGEDGAV 1021



 Score = 68.6 bits (166), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 76/277 (27%), Positives = 109/277 (39%), Gaps = 58/277 (20%)

Query: 116 ITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G +H+L  + + +V+S G +  G LG G   T       +     + +  V+AS +H
Sbjct: 405 MAAGSFHSLAALGDGTVWSWGRNTYGQLGDG---TTAERHAAVRVEGLSGIRGVAASGHH 461

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           +  V   G V+  G N++   G   T R   RP  V  L  V    V  G + T  L   
Sbjct: 462 SLAVGADGTVWAWGRNAAGQLGDGST-RDRARPVAVSGLTSVVA--VATGGSHTMALRGD 518

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV-------------------------- 268
           G V   G N  GQLG G T+DR TP  +A L+ V                          
Sbjct: 519 GTVWAWGYNALGQLGDGTTVDRLTPVRVARLDSVVAVAAGTYFSMALRGDGTVWTWGEGF 578

Query: 269 ---------------------GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 307
                                 +V ++AAG ++ LAV G+G V+++G      LG G   
Sbjct: 579 EGQVGDGGGVQRLFPVQVAGLTNVTRVAAGSAHALAVRGDGTVWAWGDNGEGQLGDGTWS 638

Query: 308 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           D  +P  +Q     GI    VS G  H +AL   G V
Sbjct: 639 DRFRP--VQVPGLTGI--TAVSGGRSHSMALHGDGSV 671



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/179 (29%), Positives = 86/179 (48%), Gaps = 9/179 (5%)

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
           ++++A   H+ +V  +G V+  G N+S   G   T      P  + + + +    V +G 
Sbjct: 52  MRIAAGSQHSLYVSPTGAVWAWGGNTSGQLGGEATPLQRLAPAPLPSPRDI--VSVVSGE 109

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
             +  L   G V   G N+ GQLG G T DR TP  +A L +   VV +AAG  + LA+ 
Sbjct: 110 AHSLALDEAGTVWAWGGNSSGQLGDGTTTDRVTPMQVAGLTD---VVAVAAGDFHSLALR 166

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G+G V+++G+  +  LG G     L P  +         VV ++AG +  +A+   G V
Sbjct: 167 GDGTVWAWGTNFHGQLGRGHTEPGLTPEPVPGLE----GVVALAAGFDFTLAVMDDGTV 221



 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 67/234 (28%), Positives = 102/234 (43%), Gaps = 22/234 (9%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +T G YH + L  +  V++ G++  G LG G  + + V       P    V  V++ +  
Sbjct: 255 VTAGTYHAVALGKDGGVWTWGANSSGQLGDGAWSDRAVP---ARVPGLERVKAVASMDAS 311

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           +  +L++G V   G N S   G   T+     P  V  L+ V    V  G      L   
Sbjct: 312 SLALLEAGSVLAWGANGSGQLGDSGTDDRAT-PGEVPGLRSVAA--VVGGAQHALALRGD 368

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G +   G    GQLGHG +     P   APL  +  V  +AAG  + LA  G+G V+S+G
Sbjct: 369 GTLWAWGGGLAGQLGHGGSERHVVP---APLLRLADVASMAAGSFHSLAALGDGTVWSWG 425

Query: 295 SGSNFCLGHG---EQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYV 344
             +   LG G   E+H           R +G+  +R V+A   H +A+ + G V
Sbjct: 426 RNTYGQLGDGTTAERH--------AAVRVEGLSGIRGVAASGHHSLAVGADGTV 471



 Score = 64.7 bits (156), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 71/241 (29%), Positives = 102/241 (42%), Gaps = 23/241 (9%)

Query: 104 SDIVETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA 162
           +D+V  +AG+       +H+L L  + +V++ G++  G LG G         T    P  
Sbjct: 150 TDVVAVAAGD-------FHSLALRGDGTVWAWGTNFHGQLGRGHTEP---GLTPEPVPGL 199

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQV 221
             VV ++A  +    V+  G V   G NSS   G    T R    P  V  + G+    V
Sbjct: 200 EGVVALAAGFDFTLAVMDDGTVRAWGANSSGQLGDGTFTQR--LAPVEVAHISGISA--V 255

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
           TAG      L   G V T G+N+ GQLG G   DR  P  +  LE V +V  + A     
Sbjct: 256 TAGTYHAVALGKDGGVWTWGANSSGQLGDGAWSDRAVPARVPGLERVKAVASMDA---SS 312

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           LA+   G V ++G+  +  LG     D   P  +   R     V  V  G +H +AL   
Sbjct: 313 LALLEAGSVLAWGANGSGQLGDSGTDDRATPGEVPGLR----SVAAVVGGAQHALALRGD 368

Query: 342 G 342
           G
Sbjct: 369 G 369



 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 12/180 (6%)

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC-KQVT 222
            V +++    H   V   G V   G+N+S   G   T      P LV   +GVPC + V 
Sbjct: 751 RVDRLAVGRAHTLMVRPDGAVLAWGENASGQLGDGTTTHRAG-PVLV---RGVPCVRSVA 806

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
           +G+  +  L   G V   G+N  GQLG G T  R  P  +  L+   +V          L
Sbjct: 807 SGVLHSLALACDGSVWAWGANGRGQLGDGTTASRVIPARVDGLQGAVAVAAGG---DASL 863

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           A+  +G  +++G+ ++  LG G   D    RA+    +   +++ V+ G+ H +A    G
Sbjct: 864 ALLADGTAWAWGANAHGQLGDGSTSD----RAVPGQLKLPSNIMSVALGETHGLAAGEDG 919



 Score = 48.5 bits (114), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 64/232 (27%), Positives = 98/232 (42%), Gaps = 18/232 (7%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + + TG  HT+ L  + +V++ G +  G LG G   T     T +       VV V+A  
Sbjct: 503 VAVATGGSHTMALRGDGTVWAWGYNALGQLGDG---TTVDRLTPVRVARLDSVVAVAAGT 559

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             +  +   G V+T G+      G     + +F P  V  L  V   +V AG      L 
Sbjct: 560 YFSMALRGDGTVWTWGEGFEGQVGDGGGVQRLF-PVQVAGLTNV--TRVAAGSAHA--LA 614

Query: 233 IRGH--VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           +RG   V   G N  GQLG G   DR  P  +  L     +  ++ G S+ +A+ G+G V
Sbjct: 615 VRGDGTVWAWGDNGEGQLGDGTWSDRFRPVQVPGLT---GITAVSGGRSHSMALHGDGSV 671

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            ++G      LG G     ++P  +      GI  +  S    HV+AL + G
Sbjct: 672 RAWGYNGYGQLGDGTFTSRVRPAVVPGL--TGIQALHPS--HLHVLALHADG 719



 Score = 48.5 bits (114), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 74/166 (44%), Gaps = 5/166 (3%)

Query: 99   SVEHSSDIVETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRI 157
            +  +S   V+   G +++  G  HTL L  + +V++ G +    LG G ++T+     R 
Sbjct: 1294 TTRYSRVWVKGVDGVVEVRAGAAHTLALRGDGTVWTWGDNTHSQLGAGDDSTRTRIVPR- 1352

Query: 158  NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVP 217
              P  + V  + A   H+  V   G V+  G NS    G  D N     P  V+ L  V 
Sbjct: 1353 PVPGLSGVTAIGAGARHSFAVGPKGTVWAWGRNSHGQLGLGD-NANRAEPLRVKELAEVS 1411

Query: 218  CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
               V+ G +F+  +   G V + GS+ HG LG G    R +P  +A
Sbjct: 1412 V--VSGGADFSLAMQRDGTVSSWGSSLHGALGLGTAGQRSSPGQVA 1455


>gi|351702482|gb|EHB05401.1| Putative E3 ubiquitin-protein ligase HERC4 [Heterocephalus glaber]
          Length = 1057

 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 121/251 (48%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q++ G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIVQVSCGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VFS G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F  
Sbjct: 155 ASEVFSWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342



 Score = 81.6 bits (200), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 109/226 (48%), Gaps = 7/226 (3%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV+ G   +  L+    V +
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVSCGYYHSLALSKASEVFS 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGV 263



 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 97/213 (45%), Gaps = 9/213 (4%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
                 P++I  L ++  +VQ++ G  + LA++    V+S+G      LG G +   +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVSCGYYHSLALSKASEVFSWGQNKYGQLGLGIDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           P+ I++    GI  ++V+AG  H   L  SG +
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAI 211


>gi|47212899|emb|CAF90789.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 3089

 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 79/222 (35%), Positives = 113/222 (50%), Gaps = 15/222 (6%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 479 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVS 537

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 538 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 593

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK +  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 594 WSFGGGDNGKLGHGDTNRVYKPKVVEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 652

Query: 298 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             CLG G  +   L+P+ I+        VV +S GD H +AL
Sbjct: 653 --CLGCGSSEATALRPKLIEEL--ATTRVVDISIGDSHCLAL 690



 Score = 68.2 bits (165), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 67/239 (28%), Positives = 114/239 (47%), Gaps = 39/239 (16%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS----AAHVVQVSA 170
           ++ G  H+  +S +  +++ G    G LGHG   ++       N P+     ++V +VS 
Sbjct: 526 VSAGYRHSAAVSEDGELYTWGEGDFGRLGHGDSNSR-------NIPTLVKDISNVGEVSC 578

Query: 171 SENHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
             +H   + + G+    F  GDN     GH DTNR +++P++VEAL+G+  ++V AG   
Sbjct: 579 GSSHTIALSKDGRTVWSFGGGDNGKL--GHGDTNR-VYKPKVVEALQGMFIRKVCAGSQS 635

Query: 228 TGFLTIRGHVHT--------CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
           +  LT  G V+         CGS+    L          PK I  L     VV I+ G S
Sbjct: 636 SLALTSTGQVYAWGCGACLGCGSSEATAL---------RPKLIEELATT-RVVDISIGDS 685

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           + LA++ +  VY++G+ S    G G     + +P+ +      G+ + ++SAG  H +A
Sbjct: 686 HCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVVGL--DGVAIQQISAGTSHSLA 742



 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 55/177 (31%), Positives = 82/177 (46%), Gaps = 15/177 (8%)

Query: 173 NHAAFVLQS-GQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEALKGVPCKQVTAGL 225
            +  FV+ S G V  CG  S    G  D+N      +  F P    A+K V   + + G 
Sbjct: 422 QYCTFVISSDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RAIKKVSSSKGSDG- 478

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
             T   T  G V + G   +G+LGHG++  +  PK I    +   VV ++AG  +  AV+
Sbjct: 479 -HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVS 537

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  H +AL   G
Sbjct: 538 EDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSSHTIALSKDG 590



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 83/175 (47%), Gaps = 7/175 (4%)

Query: 115 QITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++ G  HT+ +S    +V+S G    G LGHG +T +      +       + +V A  
Sbjct: 575 EVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVVEALQGMFIRKVCAGS 633

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             +  +  +GQV+  G  +   CG  +      RP+L+E L       ++ G +    L+
Sbjct: 634 QSSLALTSTGQVYAWGCGACLGCGSSEAT--ALRPKLIEELATTRVVDISIGDSHCLALS 691

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
               V+  G+N+ GQ G G++    T PK +  L+ V ++ QI+AG S+ LA T 
Sbjct: 692 HDNEVYAWGNNSMGQCGQGNSTGPITKPKKVVGLDGV-AIQQISAGTSHSLAWTA 745


>gi|301114615|ref|XP_002999077.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262111171|gb|EEY69223.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 529

 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 79/245 (32%), Positives = 111/245 (45%), Gaps = 34/245 (13%)

Query: 115 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHG-----PE---TTQCVSFTRINFPSAAHV 165
            +  G  HTL L+ +  +F+ G+   G LG G     PE   T+  V F  I F  A+H 
Sbjct: 263 DLACGLGHTLALMESGELFAWGNGSNGRLGLGDTNDRPESCSTSVPVRFRHI-FCGASHS 321

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--- 222
           + +S            G+ +T G N+   CGH  TN       +     G   + VT   
Sbjct: 322 LGLS----------WDGRAYTWGKNNQGQCGHGHTNDQWTIQEIESFEDGEEAECVTYAA 371

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQ--------LGHGDTLDRPTPKSIAPLEEV-GSVVQ 273
            G   T F T  G V++CG              LGHGD   R  P  I  LE+    +V+
Sbjct: 372 GGWEHTLFSTASGRVYSCGCGYKDSRRAGIPPVLGHGDCDRRLKPTLIQSLEDAREEIVK 431

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           +A G  + LAV+ +G VY++GSG+N  LGHG++     P  ++T   +G HV    AG E
Sbjct: 432 VACGWDHSLAVSASGKVYTWGSGTNGKLGHGDEESFDTPTLVRTM--EGRHVKDAKAGCE 489

Query: 334 HVVAL 338
           H V L
Sbjct: 490 HTVFL 494



 Score = 77.4 bits (189), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 63/214 (29%), Positives = 94/214 (43%), Gaps = 14/214 (6%)

Query: 142 LGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN 201
           LGHG  T +       +      V  ++    H   +++SG++F  G+ S+   G  DTN
Sbjct: 238 LGHGSSTKEYTPRMIEHLRLKGRVRDLACGLGHTLALMESGELFAWGNGSNGRLGLGDTN 297

Query: 202 RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 261
               RP        V  + +  G + +  L+  G  +T G N  GQ GHG T D+ T + 
Sbjct: 298 D---RPESCSTSVPVRFRHIFCGASHSLGLSWDGRAYTWGKNNQGQCGHGHTNDQWTIQE 354

Query: 262 IAPLE---EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF--------CLGHGEQHDEL 310
           I   E   E   V   A G  + L  T +G VYS G G            LGHG+    L
Sbjct: 355 IESFEDGEEAECVTYAAGGWEHTLFSTASGRVYSCGCGYKDSRRAGIPPVLGHGDCDRRL 414

Query: 311 QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           +P  IQ+       +V+V+ G +H +A+ +SG V
Sbjct: 415 KPTLIQSLEDAREEIVKVACGWDHSLAVSASGKV 448



 Score = 67.4 bits (163), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 62/223 (27%), Positives = 103/223 (46%), Gaps = 28/223 (12%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS---AAHVVQVSAS 171
           I  G  H+L +S +   ++ G +  G  GHG    Q       +F     A  V   +  
Sbjct: 314 IFCGASHSLGLSWDGRAYTWGKNNQGQCGHGHTNDQWTIQEIESFEDGEEAECVTYAAGG 373

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR----PIF---------RPRLVEALKGVPC 218
             H  F   SG+V++CG      CG++D+ R    P+          +P L+++L+    
Sbjct: 374 WEHTLFSTASGRVYSCG------CGYKDSRRAGIPPVLGHGDCDRRLKPTLIQSLEDARE 427

Query: 219 K--QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA- 275
           +  +V  G + +  ++  G V+T GS T+G+LGHGD     TP  +  +E  G  V+ A 
Sbjct: 428 EIVKVACGWDHSLAVSASGKVYTWGSGTNGKLGHGDEESFDTPTLVRTME--GRHVKDAK 485

Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 318
           AG  + + +T +  ++S G G +  LGHG+     +P  I  F
Sbjct: 486 AGCEHTVFLTYDHELWSCGQGDSGRLGHGDSQTRKRPTKIGLF 528



 Score = 52.0 bits (123), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 13/119 (10%)

Query: 235 GHVHTCGSNTHGQLGHGD-----------TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G++ + G   HG+LGHG            T ++  P  IA   ++    +I +  ++ +A
Sbjct: 162 GYLMSFGKGDHGKLGHGQCVHVSCQEGNCTENKLVPTMIAATRDI-LFRRIDSLSTHSIA 220

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           +T  G   ++G+G  + LGHG    E  PR I+  R KG  V  ++ G  H +AL  SG
Sbjct: 221 ITAKGDAMAWGNGDKYRLGHGSSTKEYTPRMIEHLRLKG-RVRDLACGLGHTLALMESG 278



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 58/111 (52%), Gaps = 2/111 (1%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P ++ A + +  +++ +    +  +T +G     G+    +LGHG +    TP+ I  L 
Sbjct: 197 PTMIAATRDILFRRIDSLSTHSIAITAKGDAMAWGNGDKYRLGHGSSTKEYTPRMIEHLR 256

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQT 317
             G V  +A G  + LA+  +G ++++G+GSN  LG G+ +D  +P +  T
Sbjct: 257 LKGRVRDLACGLGHTLALMESGELFAWGNGSNGRLGLGDTND--RPESCST 305


>gi|444915471|ref|ZP_21235603.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444713402|gb|ELW54302.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 752

 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/195 (33%), Positives = 98/195 (50%), Gaps = 10/195 (5%)

Query: 111 AGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G + +  G  H+L++ S+ ++++ GS+L G  G G   T+  +  R+  P  + VV V+
Sbjct: 350 SGAVAVAAGYRHSLVVNSDGTLWAWGSNLDGQRGDG-TLTRYPTPGRV--PGLSGVVSVA 406

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
           A   H   +L  G V+  GDN+S   G   T    + PR V  L GV    V AG +F+ 
Sbjct: 407 AGGGHVLALLSDGTVWAWGDNASGQLGD-GTRHSRWVPRQVPELSGVVA--VAAGSSFSL 463

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
            +   G V + G N +GQLGHG T     P  +  L E   VV +AAG  + LAV  +G 
Sbjct: 464 AVRYDGSVWSWGDNAYGQLGHGSTDASSVPLHVRELSE---VVAVAAGSMHALAVRADGT 520

Query: 290 VYSFGSGSNFCLGHG 304
           V+ +G      LG G
Sbjct: 521 VWGWGFNDYGQLGDG 535



 Score = 77.8 bits (190), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 69/239 (28%), Positives = 106/239 (44%), Gaps = 12/239 (5%)

Query: 107 VETSAGNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV 165
           VE  +G + +  G+YH+L +  + +V++ G +L G LG G          +   P    V
Sbjct: 244 VEDVSGVVAVAAGQYHSLAVRYDGTVWAWGDNLYGQLGDGKLEGNSRWLPK-QVPGLGGV 302

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
           V VSA   H+  V   G V+  G+N+    G   +      P  V  + G     V AG 
Sbjct: 303 VAVSAGFYHSLVVRSDGTVWAWGNNAYGQLGG-GSRAHAASPVQVLGVSG--AVAVAAGY 359

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
             +  +   G +   GSN  GQ G G     PTP  +  L     VV +AAG  ++LA+ 
Sbjct: 360 RHSLVVNSDGTLWAWGSNLDGQRGDGTLTRYPTPGRVPGLS---GVVSVAAGGGHVLALL 416

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            +G V+++G  ++  LG G +H    PR +         VV V+AG    +A+   G V
Sbjct: 417 SDGTVWAWGDNASGQLGDGTRHSRWVPRQVPELS----GVVAVAAGSSFSLAVRYDGSV 471



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 20/209 (9%)

Query: 100 VEHSSDIVETSAGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRIN 158
           V   S++V  +AG+M       H L + ++ +V+  G +  G LG G E      ++ + 
Sbjct: 496 VRELSEVVAVAAGSM-------HALAVRADGTVWGWGFNDYGQLGDGFEGISARRYSPVQ 548

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVP- 217
            P  + +V V+A   H+  V   G V+  G+N+    G   T R     RLV      P 
Sbjct: 549 VPGLSGMVSVAADFGHSLAVRADGTVWAWGNNTDSELGDGTTTR-----RLVPLRVNAPG 603

Query: 218 -CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGSVVQIA 275
               ++AG N++  +   G +   G+N  GQLG G T  R  P  +  P+        +A
Sbjct: 604 TVALLSAGYNYSMAMRADGSLWAWGTNFAGQLGDGSTTSRAVPVRVQGPVR----ASTLA 659

Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHG 304
           AG S+ +AV  +G ++++G      LG G
Sbjct: 660 AGQSHSMAVGSDGFLWAWGFNFEGQLGDG 688



 Score = 64.3 bits (155), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 72/254 (28%), Positives = 112/254 (44%), Gaps = 30/254 (11%)

Query: 98  QSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRI 157
           + V   S +V  +AG+      RY      + SV+S G +  G LGHG      V    +
Sbjct: 444 RQVPELSGVVAVAAGSSFSLAVRY------DGSVWSWGDNAYGQLGHGSTDASSVP---L 494

Query: 158 NFPSAAHVVQVSASENHAAFVLQSGQVFTCG--DNSSFCCGHRDTNRPIFRPRLVEALKG 215
           +    + VV V+A   HA  V   G V+  G  D      G    +   + P  V  L G
Sbjct: 495 HVRELSEVVAVAAGSMHALAVRADGTVWGWGFNDYGQLGDGFEGISARRYSPVQVPGLSG 554

Query: 216 VPCKQVTAGLNFTGFLTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGSVV 272
           +    V+   +F   L +R  G V   G+NT  +LG G T  R  P  + AP    G+V 
Sbjct: 555 M----VSVAADFGHSLAVRADGTVWAWGNNTDSELGDGTTTRRLVPLRVNAP----GTVA 606

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
            ++AG +Y +A+  +G ++++  G+NF   LG G       P  +Q   R       ++A
Sbjct: 607 LLSAGYNYSMAMRADGSLWAW--GTNFAGQLGDGSTTSRAVPVRVQGPVRAST----LAA 660

Query: 331 GDEHVVALDSSGYV 344
           G  H +A+ S G++
Sbjct: 661 GQSHSMAVGSDGFL 674



 Score = 64.3 bits (155), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 68/226 (30%), Positives = 103/226 (45%), Gaps = 18/226 (7%)

Query: 122 HTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           H+L +  + +V++ G +  G LG G   T     T +     + V  V+A   H+  +  
Sbjct: 59  HSLAVRPDGTVWTTGGNGHGQLGDG---TTLSRRTPVQVQGLSGVAAVAAGHGHSLALRY 115

Query: 181 SGQVFTCGDNSSFCCGH--RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
            G V+  G+N+    G   RD NR +  P  V  L GV    V AG   +  +   G V 
Sbjct: 116 DGTVWAWGNNAYGQLGDDTRD-NRTV--PVQVTGLSGV--VSVVAGDTHSLAVRSDGSVW 170

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
             G NT GQLG G   DR  P  +  L     VV +AAG ++ LAV  +G V+++G+ ++
Sbjct: 171 AWGRNTSGQLGDGTRDDRAVPVQVTGLS---GVVSVAAGGNHSLAVRSDGSVWAWGNNAS 227

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             LG   +     P  ++        VV V+AG  H +A+   G V
Sbjct: 228 GQLGGAPEAAYPVPWRVEDVS----GVVAVAAGQYHSLAVRYDGTV 269


>gi|54261597|gb|AAH84600.1| LOC495281 protein, partial [Xenopus laevis]
          Length = 1031

 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/231 (27%), Positives = 106/231 (45%), Gaps = 5/231 (2%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           ++ G  HTL +++   VFS G +  G +G             I       +VQV+   +H
Sbjct: 73  VSCGEAHTLALNDKGQVFSWGHAAHGQIGLSVAEDYIRVPRNIKSLYDIQIVQVACGHHH 132

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           +  + +   +++ G N     G     +    PR +++L G+P   + AG   +  LT+ 
Sbjct: 133 SLALSKESDIYSWGQNQYGQLGLGSEIKKESAPRHIKSLAGIPFAHIAAGGGHSFALTMS 192

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G +   G N  GQLG  D  DR  P  +  L     ++ I  G  +  A+T  G V++FG
Sbjct: 193 GAIFGWGRNKFGQLGLNDETDRSAPALLKSLRS-QKIIHICCGEDHTAALTKEGGVFTFG 251

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYV 344
           +G    LGH   + E+ PR +  F   G  V +++ G +H +A + SSG +
Sbjct: 252 AGGYGQLGHNSTNHEVNPRKV--FELMGSIVTQIACGRQHTLAFVPSSGRI 300



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 100/207 (48%), Gaps = 8/207 (3%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G +H+L +S  S ++S G +  G LG G E  +  +   I   +      ++A  
Sbjct: 124 VQVACGHHHSLALSKESDIYSWGQNQYGQLGLGSEIKKESAPRHIKSLAGIPFAHIAAGG 183

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
            H+  +  SG +F  G N     G  D T+R    P L+++L+      +  G + T  L
Sbjct: 184 GHSFALTMSGAIFGWGRNKFGQLGLNDETDRS--APALLKSLRSQKIIHICCGEDHTAAL 241

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGV 289
           T  G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  + LA V  +G 
Sbjct: 242 TKEGGVFTFGAGGYGQLGHNSTNHEVNPRKV--FELMGSIVTQIACGRQHTLAFVPSSGR 299

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQ 316
           +YSFG G N  LG G   +   P  ++
Sbjct: 300 IYSFGLGGNGQLGTGSTSNRKSPFTVK 326



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/224 (25%), Positives = 104/224 (46%), Gaps = 7/224 (3%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +     ++    A  +V VS  E H   + 
Sbjct: 28  RHTVFVLDDGTVYTCGCNDLGQLGHDKSRKKP---DQVGALDAQTIVAVSCGEAHTLALN 84

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQVF+ G  +    G       I  PR +++L  +   QV  G + +  L+    +++
Sbjct: 85  DKGQVFSWGHAAHGQIGLSVAEDYIRVPRNIKSLYDIQIVQVACGHHHSLALSKESDIYS 144

Query: 240 CGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G  + + + P+ I  L  +     IAAG  +  A+T +G ++ +G    
Sbjct: 145 WGQNQYGQLGLGSEIKKESAPRHIKSLAGI-PFAHIAAGGGHSFALTMSGAIFGWGRNKF 203

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
             LG  ++ D   P  +++ R + I  + +  G++H  AL   G
Sbjct: 204 GQLGLNDETDRSAPALLKSLRSQKI--IHICCGEDHTAALTKEG 245



 Score = 72.0 bits (175), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 61/191 (31%), Positives = 87/191 (45%), Gaps = 8/191 (4%)

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           R +F    +V  V     H  FVL  G V+TCG N     GH  + +   +P  V AL  
Sbjct: 11  RCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDLGQLGHDKSRK---KPDQVGALDA 67

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQI 274
                V+ G   T  L  +G V + G   HGQ+G     D    P++I  L ++  +VQ+
Sbjct: 68  QTIVAVSCGEAHTLALNDKGQVFSWGHAAHGQIGLSVAEDYIRVPRNIKSLYDI-QIVQV 126

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           A G  + LA++    +YS+G      LG G E   E  PR I++    GI    ++AG  
Sbjct: 127 ACGHHHSLALSKESDIYSWGQNQYGQLGLGSEIKKESAPRHIKSL--AGIPFAHIAAGGG 184

Query: 334 HVVALDSSGYV 344
           H  AL  SG +
Sbjct: 185 HSFALTMSGAI 195



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 68/136 (50%), Gaps = 6/136 (4%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  +       + V  G   T F+   G V+TCG N  GQLGH  +  R  P  + 
Sbjct: 6   VLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDLGQLGHDKS--RKKPDQVG 63

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKG 322
            L +  ++V ++ G ++ LA+   G V+S+G  ++  +G     D ++ PR I++     
Sbjct: 64  AL-DAQTIVAVSCGEAHTLALNDKGQVFSWGHAAHGQIGLSVAEDYIRVPRNIKSLY--D 120

Query: 323 IHVVRVSAGDEHVVAL 338
           I +V+V+ G  H +AL
Sbjct: 121 IQIVQVACGHHHSLAL 136


>gi|196012989|ref|XP_002116356.1| hypothetical protein TRIADDRAFT_60369 [Trichoplax adhaerens]
 gi|190580947|gb|EDV21026.1| hypothetical protein TRIADDRAFT_60369 [Trichoplax adhaerens]
          Length = 4253

 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 64/237 (27%), Positives = 113/237 (47%), Gaps = 8/237 (3%)

Query: 115  QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHG--PETTQCVSFTRINFPSAAHVVQVSAS 171
            QI  G   T +I  + +V +CG    G LG G   +  +    T +       +   +  
Sbjct: 3441 QIHCGHNSTFVIEHDGTVLACGEGSYGRLGQGNSDDLPRLRPITALQGFVVTELATSTGL 3500

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
            E H+  + ++G+VF+ GD      GH ++ R   RPR +EAL+G     V  G   +  +
Sbjct: 3501 EGHSLALTETGEVFSWGDGDYGKLGHGNSERQ-RRPRQIEALRGEDVLHVACGHKHSAIV 3559

Query: 232  TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN-GVV 290
            T+ G + T G++  G+LG G+T ++  P  +  L+ +  V  IA G ++ + VT +   V
Sbjct: 3560 TVDGKLFTFGASDLGRLGLGNTSNKKLPAQVTALQPI-MVELIACGANHTVVVTTDRESV 3618

Query: 291  YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSLC 347
            ++FG G    LG G    ++ P+ +  F +  +++ ++  G    +AL   G V  C
Sbjct: 3619 WTFGEGEYGQLGLGRTTAKMTPQYVDAFSK--LNIKKICCGARFTLALTKEGKVYSC 3673



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 92/185 (49%), Gaps = 12/185 (6%)

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRD--TNRPIFRPRLVEA-LKGVPCKQ 220
           ++V    S+ H   +   G++++ GD      GH +  T +    P+L+   ++G   +Q
Sbjct: 470 NLVSSKGSDGHTLAIASDGRIYSWGDGDYGKLGHGNHVTQK---SPKLILGPMQGKVVRQ 526

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           +  G   +  +T  G ++T G   +G+LGHGD   R  P  +  +  VGSV   + G S+
Sbjct: 527 IAVGYRHSAAITSEGLLYTWGDGDYGRLGHGDNHSRSIPTLVKDITGVGSV---SCGSSF 583

Query: 281 MLAVTGNGV-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
            + ++ +   V+SFG+G N  LGHG+     +P+ I     +G+ + +V    +  +AL 
Sbjct: 584 TVVISQDATTVWSFGAGDNGKLGHGDTSRVYRPKVISNL--QGLLIRKVCCASQSSLALT 641

Query: 340 SSGYV 344
           S G V
Sbjct: 642 SIGQV 646



 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 107/227 (47%), Gaps = 8/227 (3%)

Query: 114  MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            + +  G  H+ +++ +  +F+ G+S  G LG G  + + +   ++       V  ++   
Sbjct: 3547 LHVACGHKHSAIVTVDGKLFTFGASDLGRLGLGNTSNKKLP-AQVTALQPIMVELIACGA 3605

Query: 173  NHAAFVLQSGQ-VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
            NH   V    + V+T G+      G   T   +  P+ V+A   +  K++  G  FT  L
Sbjct: 3606 NHTVVVTTDRESVWTFGEGEYGQLGLGRTTAKM-TPQYVDAFSKLNIKKICCGARFTLAL 3664

Query: 232  TIRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            T  G V++CG N    +   DT      P+ +  L E   +  IAAG  + LA+T  G V
Sbjct: 3665 TKEGKVYSCGHNRCNGIFEVDTQHADYYPQQVMALSE-QFIEDIAAGYEHALALTKEGDV 3723

Query: 291  YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +S+G+ ++  LG G+   + +P  I + + KGI   ++SAG  H  A
Sbjct: 3724 WSWGNDTDGQLGLGQTLPQREPCLISSLQGKGIR--QISAGHNHSAA 3768



 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 74/147 (50%), Gaps = 12/147 (8%)

Query: 199  DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT 258
            ++ R + +P L  +      KQ+  G N T  +   G V  CG  ++G+LG G++ D P 
Sbjct: 3422 ESGRLVLQPTLTSSFS--KAKQIHCGHNSTFVIEHDGTVLACGEGSYGRLGQGNSDDLPR 3479

Query: 259  PKSIAPLEEVGSVVQIAAGPS----YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRA 314
             + I  L+  G VV   A  +    + LA+T  G V+S+G G    LGHG    + +PR 
Sbjct: 3480 LRPITALQ--GFVVTELATSTGLEGHSLALTETGEVFSWGDGDYGKLGHGNSERQRRPRQ 3537

Query: 315  IQTFRRKGIHVVRVSAGDEH--VVALD 339
            I+  R  G  V+ V+ G +H  +V +D
Sbjct: 3538 IEALR--GEDVLHVACGHKHSAIVTVD 3562



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/199 (27%), Positives = 94/199 (47%), Gaps = 6/199 (3%)

Query: 116  ITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
            I  G  HT++++    SV++ G    G LG G  TT  ++   ++  S  ++ ++     
Sbjct: 3601 IACGANHTVVVTTDRESVWTFGEGEYGQLGLG-RTTAKMTPQYVDAFSKLNIKKICCGAR 3659

Query: 174  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
                + + G+V++CG N        DT    + P+ V AL     + + AG      LT 
Sbjct: 3660 FTLALTKEGKVYSCGHNRCNGIFEVDTQHADYYPQQVMALSEQFIEDIAAGYEHALALTK 3719

Query: 234  RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA--VTGNGVVY 291
             G V + G++T GQLG G TL +  P  I+ L+  G + QI+AG ++  A  V    +  
Sbjct: 3720 EGDVWSWGNDTDGQLGLGQTLPQREPCLISSLQGKG-IRQISAGHNHSAAWTVAPASIRK 3778

Query: 292  SFGSGSNFCLGHGEQHDEL 310
            +  + S+  LG  E+  E+
Sbjct: 3779 AMATSSSLELGLPERIPEI 3797



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 60/228 (26%), Positives = 102/228 (44%), Gaps = 15/228 (6%)

Query: 115 QITTGRYHTLLISNSSV-FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI  G  H+  I++  + ++ G    G LGHG   ++ +            V  VS   +
Sbjct: 526 QIAVGYRHSAAITSEGLLYTWGDGDYGRLGHGDNHSRSIPTL---VKDITGVGSVSCGSS 582

Query: 174 HAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
               + Q       F  GDN     GH DT+R ++RP+++  L+G+  ++V      +  
Sbjct: 583 FTVVISQDATTVWSFGAGDNGKL--GHGDTSR-VYRPKVISNLQGLLIRKVCCASQSSLA 639

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           LT  G V   GS      G  D      PK +   +++  ++ IA G ++ LA+T +  V
Sbjct: 640 LTSIGQVFVWGSGPCLGYGQADAT-FLVPKRLDEFQDL-QIIDIAVGDNHCLALTCDNDV 697

Query: 291 YSFGSGSNFCLGHGEQHDE-LQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           YS+G+ ++   G G  +   L PR +  F    I+  ++S G  H +A
Sbjct: 698 YSWGNNASGQCGLGNNNSPVLLPRKVTGFDNHVIY--QISVGTSHSIA 743


>gi|357620246|gb|EHJ72511.1| hypothetical protein KGM_11261 [Danaus plexippus]
          Length = 4305

 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 70/229 (30%), Positives = 106/229 (46%), Gaps = 9/229 (3%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAF 177
            G++   L ++  V+S G    G LGHG   T  +   R I   +   V+ ++    H+A 
Sbjct: 3153 GKHALALTADGKVYSWGEGEDGKLGHGNRIT--LEAPRLIESLAGERVISIACGSAHSAC 3210

Query: 178  VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRG 235
            V   G ++T G       GH D N  +  P++VEAL      QV  G     T  LT  G
Sbjct: 3211 VTARGHLYTWGLGEYGRLGHGDDNIQLV-PKMVEALANYRVIQVACGSRDAQTLALTACG 3269

Query: 236  HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
             V + G    G+LG G +     P ++  L  +G V Q+  G  + LA+T +G V+++G 
Sbjct: 3270 KVFSWGDGDFGKLGRGGSDGCAIPMNVERLNSLG-VTQVECGAQFSLALTRDGEVWTWGK 3328

Query: 296  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            G  F LGHG      +P  ++  R  G  V+ V+ G  H +A+ S   V
Sbjct: 3329 GDYFRLGHGCDAHVRRPTLVEALR--GRRVIHVAVGALHCLAVTSENQV 3375



 Score = 78.6 bits (192), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 71/224 (31%), Positives = 105/224 (46%), Gaps = 15/224 (6%)

Query: 128  NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV----VQVSASENHAAFVLQSGQ 183
            +  +F+CG    G LG G   +  VS  R N P  +HV    V V +   HA  +   G+
Sbjct: 3108 DGKLFACGEGTNGRLGLG--HSNNVSTPRAN-PYLSHVLVRRVAVHSGGKHALALTADGK 3164

Query: 184  VFTCGDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            V++ G+      GH   NR     PRL+E+L G     +  G   +  +T RGH++T G 
Sbjct: 3165 VYSWGEGEDGKLGH--GNRITLEAPRLIESLAGERVISIACGSAHSACVTARGHLYTWGL 3222

Query: 243  NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFC 300
              +G+LGHGD   +  PK +  L     V+Q+A G   +  LA+T  G V+S+G G    
Sbjct: 3223 GEYGRLGHGDDNIQLVPKMVEALANY-RVIQVACGSRDAQTLALTACGKVFSWGDGDFGK 3281

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            LG G       P  ++  R   + V +V  G +  +AL   G V
Sbjct: 3282 LGRGGSDGCAIPMNVE--RLNSLGVTQVECGAQFSLALTRDGEV 3323



 Score = 74.7 bits (182), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 85/175 (48%), Gaps = 8/175 (4%)

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   G+V++ G+      GH   NR  + RP+L+ AL G+    +  G   +  L
Sbjct: 4048 KHCLALSADGEVYSWGEGEDGKLGH--GNRVSYDRPKLITALSGLEVVCIACGGAHSACL 4105

Query: 232  TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLAVTGNGV 289
            T RG ++T G   +G+LGHGD+ D+  PK +  L     V+ +A  +G +  L +T +  
Sbjct: 4106 TARGRIYTWGKGRYGRLGHGDSEDQLIPKLVEALSSF-RVIDVACGSGDAQTLCITDDDN 4164

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            V+S+G G    LG G       P  I     KG+ V++V  G +  VAL   G V
Sbjct: 4165 VWSWGDGDYGKLGRGGSEGCKLPMRIDCL--KGLRVIKVECGSQFSVALCQCGSV 4217



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 65/231 (28%), Positives = 103/231 (44%), Gaps = 13/231 (5%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSASENHA 175
            G++   L ++  V+S G    G LGHG      VS+ R   I   S   VV ++    H+
Sbjct: 4047 GKHCLALSADGEVYSWGEGEDGKLGHGNR----VSYDRPKLITALSGLEVVCIACGGAHS 4102

Query: 176  AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI-- 233
            A +   G+++T G       GH D+   +  P+LVEAL       V  G      L I  
Sbjct: 4103 ACLTARGRIYTWGKGRYGRLGHGDSEDQLI-PKLVEALSSFRVIDVACGSGDAQTLCITD 4161

Query: 234  RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
              +V + G   +G+LG G +     P  I  L+ +  V+++  G  + +A+   G VY++
Sbjct: 4162 DDNVWSWGDGDYGKLGRGGSEGCKLPMRIDCLKGL-RVIKVECGSQFSVALCQCGSVYTW 4220

Query: 294  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            G G    LGHG      +P  +     +G  +V ++ G  H VA   +G V
Sbjct: 4221 GKGDYHRLGHGSYEHVRRPMRVTGM--QGKMIVSIATGSLHCVACTDTGEV 4269



 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/181 (28%), Positives = 84/181 (46%), Gaps = 10/181 (5%)

Query: 168  VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR---PIFRPRLVEALKGVPCKQVTAG 224
            VS   N  +      +VF  G N     G    ++   P+F P L  AL+ V    +  G
Sbjct: 3043 VSVDNNPPSLPNDCPKVFVWGLNDKDQLGGVKGSKVKVPVFSPAL-SALRPV---HIAGG 3098

Query: 225  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV-GSVVQIAAGPSYMLA 283
                  ++  G +  CG  T+G+LG G + +  TP++   L  V    V + +G  + LA
Sbjct: 3099 SKTLFIVSHDGKLFACGEGTNGRLGLGHSNNVSTPRANPYLSHVLVRRVAVHSGGKHALA 3158

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +G VYS+G G +  LGHG +     PR I++    G  V+ ++ G  H   + + G+
Sbjct: 3159 LTADGKVYSWGEGEDGKLGHGNRITLEAPRLIESL--AGERVISIACGSAHSACVTARGH 3216

Query: 344  V 344
            +
Sbjct: 3217 L 3217



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 60/232 (25%), Positives = 100/232 (43%), Gaps = 24/232 (10%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           GR++    S    +S G    G LGHG +T    +   ++  +   VV+V+A    +A +
Sbjct: 534 GRHYLCRSSCGGAWSWGIGEDGRLGHG-DTAARDAPQPLHHLAHHEVVRVAAGLACSAVI 592

Query: 179 LQSGQVFTCGDNSSFCCGHRD-----TNRPI-FRPRLVEALKGVPCKQVTAGLNFTGFLT 232
              G ++T G  +    GH       T +P+ F    +E +  V    +  G   T   T
Sbjct: 593 TSRGALYTWGRGAQGRLGHGTIENCLTPQPVSFNAHNIERIIDV---ALGWGEGSTLCCT 649

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G V   G    G           TP++++ L  +  V ++  G  +  A+T  G VY+
Sbjct: 650 WEGAVQVFGEGEAG-----------TPRALSALA-MFRVTRVYTGEHWHAALTDGGQVYT 697

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           +G G  + LGHG       P+ ++    +GI +V +S G  H +AL S G +
Sbjct: 698 WGKGDGYRLGHGNMESTKIPKLVEAL--QGIKIVDLSLGASHGIALSSEGVL 747



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/203 (24%), Positives = 83/203 (40%), Gaps = 5/203 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF- 177
            G +   L +   +++ G    G LGHG    Q +    +   S+  V+ V+     A   
Sbjct: 4099 GAHSACLTARGRIYTWGKGRYGRLGHGDSEDQLIP-KLVEALSSFRVIDVACGSGDAQTL 4157

Query: 178  -VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             +     V++ GD      G R  +     P  ++ LKG+   +V  G  F+  L   G 
Sbjct: 4158 CITDDDNVWSWGDGDYGKLG-RGGSEGCKLPMRIDCLKGLRVIKVECGSQFSVALCQCGS 4216

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V+T G   + +LGHG       P  +  ++    +V IA G  + +A T  G VY++G  
Sbjct: 4217 VYTWGKGDYHRLGHGSYEHVRRPMRVTGMQG-KMIVSIATGSLHCVACTDTGEVYTWGDN 4275

Query: 297  SNFCLGHGEQHDELQPRAIQTFR 319
                LG G      +PR +   +
Sbjct: 4276 DEGQLGDGTTLAAQRPRLLMALQ 4298



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 90/206 (43%), Gaps = 13/206 (6%)

Query: 106  IVETSAGN--MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA 162
            ++E+ AG   + I  G  H+  ++    +++ G    G LGHG +  Q V    +   + 
Sbjct: 3189 LIESLAGERVISIACGSAHSACVTARGHLYTWGLGEYGRLGHGDDNIQLVP-KMVEALAN 3247

Query: 163  AHVVQVS-ASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
              V+QV+  S +     L + G+VF+ GD      G R  +     P  VE L  +   Q
Sbjct: 3248 YRVIQVACGSRDAQTLALTACGKVFSWGDGDFGKLG-RGGSDGCAIPMNVERLNSLGVTQ 3306

Query: 221  VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
            V  G  F+  LT  G V T G   + +LGHG       P  +  L     V+ +A G  +
Sbjct: 3307 VECGAQFSLALTRDGEVWTWGKGDYFRLGHGCDAHVRRPTLVEALRG-RRVIHVAVGALH 3365

Query: 281  MLAVTGNGVVYSFGSGSNFCLGHGEQ 306
             LAVT    V+++G        HG+Q
Sbjct: 3366 CLAVTSENQVWAWGDND-----HGQQ 3386



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 61/144 (42%), Gaps = 2/144 (1%)

Query: 125  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
            L +   VFS G    G LG G  +  C     +   ++  V QV      +  + + G+V
Sbjct: 3265 LTACGKVFSWGDGDFGKLGRG-GSDGCAIPMNVERLNSLGVTQVECGAQFSLALTRDGEV 3323

Query: 185  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
            +T G    F  GH   +  + RP LVEAL+G     V  G      +T    V   G N 
Sbjct: 3324 WTWGKGDYFRLGH-GCDAHVRRPTLVEALRGRRVIHVAVGALHCLAVTSENQVWAWGDND 3382

Query: 245  HGQLGHGDTLDRPTPKSIAPLEEV 268
            HGQ G+G T     P  +A +E V
Sbjct: 3383 HGQQGNGTTCVNRRPALVAGVEGV 3406



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 63/150 (42%), Gaps = 3/150 (2%)

Query: 118  TGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL I++  +V+S G    G LG G  +  C    RI+      V++V      + 
Sbjct: 4151 SGDAQTLCITDDDNVWSWGDGDYGKLGRG-GSEGCKLPMRIDCLKGLRVIKVECGSQFSV 4209

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + Q G V+T G       GH      + RP  V  ++G     +  G       T  G 
Sbjct: 4210 ALCQCGSVYTWGKGDYHRLGHGSYEH-VRRPMRVTGMQGKMIVSIATGSLHCVACTDTGE 4268

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            V+T G N  GQLG G TL    P+ +  L+
Sbjct: 4269 VYTWGDNDEGQLGDGTTLAAQRPRLLMALQ 4298



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 68/155 (43%), Gaps = 20/155 (12%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           + Q++ +E  A  +   G V+T   ++               P LV  L+     QV+  
Sbjct: 485 IQQIACAEKLALLLTHDGAVYTLPYDT-------------MTPHLVPGLESKTITQVSCH 531

Query: 225 LNFTGFLTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG--SVVQIAAGPSY 280
                +L     G   + G    G+LGHGDT  R  P+   PL  +    VV++AAG + 
Sbjct: 532 SLGRHYLCRSSCGGAWSWGIGEDGRLGHGDTAARDAPQ---PLHHLAHHEVVRVAAGLAC 588

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAI 315
              +T  G +Y++G G+   LGHG   + L P+ +
Sbjct: 589 SAVITSRGALYTWGRGAQGRLGHGTIENCLTPQPV 623



 Score = 38.5 bits (88), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 28/119 (23%), Positives = 53/119 (44%), Gaps = 7/119 (5%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V +V   E+  A +   GQV+T G    +  GH +       P+LVEAL+G+    ++ G
Sbjct: 676 VTRVYTGEHWHAALTDGGQVYTWGKGDGYRLGHGNMESTKI-PKLVEALQGIKIVDLSLG 734

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            +    L+  G +   G++   Q+ +      P P+ +           +++GP+ + A
Sbjct: 735 ASHGIALSSEGVLFVWGTHERTQISN------PVPQPVKAFNPSFKANGVSSGPTQIFA 787


>gi|156399604|ref|XP_001638591.1| predicted protein [Nematostella vectensis]
 gi|156225713|gb|EDO46528.1| predicted protein [Nematostella vectensis]
          Length = 140

 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/143 (37%), Positives = 75/143 (52%), Gaps = 4/143 (2%)

Query: 168 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLN 226
           VS  ++H A V      +T GDNS    G  D  NR   +P LV+ LKG    +   G  
Sbjct: 1   VSVGQSHVAVVTLERAAYTWGDNSRGQLGQGDLVNRD--KPTLVDTLKGKAITRACCGDK 58

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
           F+ F+T  G V TCGS+  G LGHGD    P PK I  L  V  V  ++ GP ++  V  
Sbjct: 59  FSVFVTDNGIVMTCGSSDTGCLGHGDWSSTPRPKLIEGLLSV-DVTAVSCGPHHVAVVCS 117

Query: 287 NGVVYSFGSGSNFCLGHGEQHDE 309
            G+V+++G G++  LG G + D+
Sbjct: 118 EGLVFTWGKGADGRLGLGNEDDQ 140



 Score = 64.3 bits (155), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 62/124 (50%), Gaps = 3/124 (2%)

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           V+ G +    +T+    +T G N+ GQLG GD ++R  P  +  L+   ++ +   G  +
Sbjct: 1   VSVGQSHVAVVTLERAAYTWGDNSRGQLGQGDLVNRDKPTLVDTLKGK-AITRACCGDKF 59

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            + VT NG+V + GS    CLGHG+     +P+ I+      + V  VS G  HV  + S
Sbjct: 60  SVFVTDNGIVMTCGSSDTGCLGHGDWSSTPRPKLIEGLLS--VDVTAVSCGPHHVAVVCS 117

Query: 341 SGYV 344
            G V
Sbjct: 118 EGLV 121



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/143 (25%), Positives = 67/143 (46%), Gaps = 5/143 (3%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           ++ G+ H  +++   + ++ G +  G LG G    +    T ++      + +    +  
Sbjct: 1   VSVGQSHVAVVTLERAAYTWGDNSRGQLGQGDLVNR-DKPTLVDTLKGKAITRACCGDKF 59

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           + FV  +G V TCG + + C GH D ++ P  RP+L+E L  V    V+ G +    +  
Sbjct: 60  SVFVTDNGIVMTCGSSDTGCLGHGDWSSTP--RPKLIEGLLSVDVTAVSCGPHHVAVVCS 117

Query: 234 RGHVHTCGSNTHGQLGHGDTLDR 256
            G V T G    G+LG G+  D+
Sbjct: 118 EGLVFTWGKGADGRLGLGNEDDQ 140


>gi|297274438|ref|XP_001101212.2| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 3
           [Macaca mulatta]
          Length = 519

 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 96/218 (44%), Gaps = 4/218 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  +F  G++ CG LG G +    +   R++  S   +  +S  S  H       G+VFT
Sbjct: 64  NDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFT 122

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN  +   ++   L      +V  G   +  LT  G V   G N  G
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 182

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T+++P P+ +    +   VV IA G    +AV   G VY +G   N  LG G  
Sbjct: 183 QVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSS 242

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            +  QP   +    +GI V RV+ G  H + L   G V
Sbjct: 243 GN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQV 278



 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 92/187 (49%), Gaps = 12/187 (6%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G YH+L L S+  VF+ G +  G +G G    Q +            VV ++  +
Sbjct: 155 IEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ 214

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
                V+ +G+V+  G N +   G   + N+P   P  V AL+G+  ++V  G   T  L
Sbjct: 215 MCCMAVVDTGEVYVWGYNGNGQLGLGSSGNQPT--PCRVAALQGIRVQRVACGYAHTLVL 272

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDR--PTPKSIAPLEEVGSVVQIAAGPS--YMLAVTGN 287
           T  G V+  G+N++GQLG G+  ++  PTP ++    E   +++IAA  S     A T  
Sbjct: 273 TDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTV----EKDRIIEIAACHSTHTSAAKTQG 328

Query: 288 GVVYSFG 294
           G VY +G
Sbjct: 329 GHVYMWG 335



 Score = 40.4 bits (93), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 55/117 (47%), Gaps = 5/117 (4%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 287
           + T+   +   G+N  G LG GD      P+ +  L  +++ S +   +GP  +LA T  
Sbjct: 60  YTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIAS-LSYGSGPHIVLATT-E 117

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G V+++G  +   LG+G  +  L P  I T       V+ V+ G  H + L S G V
Sbjct: 118 GEVFTWGHNAYSQLGNGTTNHGLVPCQIST-NLSNKQVIEVACGSYHSLVLTSDGEV 173


>gi|296486675|tpg|DAA28788.1| TPA: hect domain and RLD 6-like isoform 1 [Bos taurus]
          Length = 980

 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 114/226 (50%), Gaps = 8/226 (3%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           ++ G+ H+L + +   VF+ G++  G LG G          +I   +   ++QV+    H
Sbjct: 80  VSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYH 139

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           +  + + GQVF+ G NS    G          P+ V +L+G+P  QV AG + +  L++ 
Sbjct: 140 SVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSLS 199

Query: 235 GHVHTCGSNTHGQL---GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           G     GSN+ GQL   G+   + R  P SI  L+ +G VV I+ G  +   +T +G V+
Sbjct: 200 GTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLG-VVSISCGYKHTAVLTQDGKVF 258

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           +FG  S   LGH    ++  P+ ++  R +G+ V ++  G +H +A
Sbjct: 259 TFGDNSYGQLGHDPTAEKRGPQLVE--RIEGL-VSQIDCGSDHTLA 301



 Score = 81.6 bits (200), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 62/187 (33%), Positives = 93/187 (49%), Gaps = 6/187 (3%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH++ +S +  VFS G++  G LG G E     S  R+       + QV+A  
Sbjct: 131 IQVACGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGG 190

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPI--FRPRLVEALKGVPCKQVTAGLNFTGF 230
           +H+  +  SG  F  G NS+        N P+  ++P  + ALK +    ++ G   T  
Sbjct: 191 HHSFALSLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAV 250

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA-VTGNGV 289
           LT  G V T G N++GQLGH  T ++  P+ +  +E  G V QI  G  + LA +   G 
Sbjct: 251 LTQDGKVFTFGDNSYGQLGHDPTAEKRGPQLVERIE--GLVSQIDCGSDHTLAYIYTTGQ 308

Query: 290 VYSFGSG 296
           V SFG G
Sbjct: 309 VVSFGRG 315



 Score = 79.0 bits (193), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 71/238 (29%), Positives = 112/238 (47%), Gaps = 13/238 (5%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG--PETTQCVSFTRINFPSAAHVVQVSA 170
           +Q  +G +H+LL+ S+ +V SCG +  G LG    P   Q     RI      +V  VS 
Sbjct: 26  LQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQP---ERIPALETLNVALVSC 82

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            + H+  V   G+VF  G  S    G  +     F P+ ++ L G+   QV  G   +  
Sbjct: 83  GKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVA 142

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
           L+  G V + G+N+HGQLG G     + +P+ +  LE +  + Q+AAG  +  A++ +G 
Sbjct: 143 LSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGHHSFALSLSGT 201

Query: 290 VYSFGSGSNFCL---GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            + +GS S   L   G+       +P +I   +  G  VV +S G +H   L   G V
Sbjct: 202 SFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLG--VVSISCGYKHTAVLTQDGKV 257



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/180 (30%), Positives = 99/180 (55%), Gaps = 6/180 (3%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           ++Q ++ E+H+  +L  G V +CGDNS    G + T R   +P  + AL+ +    V+ G
Sbjct: 25  LLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGE-QPERIPALETLNVALVSCG 83

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYMLA 283
              +  +  +G V   G+ + GQLG G+  +    PK I  L  +  ++Q+A G  + +A
Sbjct: 84  KEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGI-KIIQVACGHYHSVA 142

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           ++ +G V+S+G+ S+  LG G++   +  P+ +++   +GI + +V+AG  H  AL  SG
Sbjct: 143 LSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGHHSFALSLSG 200


>gi|413942403|gb|AFW75052.1| putative regulator of chromosome condensation (RCC1) family
           protein, partial [Zea mays]
          Length = 688

 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 58/176 (32%), Positives = 87/176 (49%), Gaps = 5/176 (2%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  V     HAA V+++G+VFT G++S    GH  T     RPRLVE+L       V  G
Sbjct: 79  VYHVDCGVKHAALVMKNGEVFTWGEDSGGRLGH-GTREDCVRPRLVESLTVSNVDFVACG 137

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
              T  +T  G ++T G  T+  G LGHG+ +    PK I+   E   V  ++ G  +  
Sbjct: 138 EFHTCAVTTTGELYTWGDGTYNVGLLGHGNDVGHWIPKRISGALEGLQVAYVSCGTWHTA 197

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            +T  G +++FG GS   LGHG+      PR +++    G+  + V+ G  H  A+
Sbjct: 198 LITSMGQLFTFGDGSFGVLGHGDLKSVSYPREVESL--SGLKTIAVACGVWHTAAI 251



 Score = 74.7 bits (182), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 104/228 (45%), Gaps = 15/228 (6%)

Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRI-----NFPSA 162
           ++ G +HT LI S   +F+ G    GVLGHG       P   + +S  +           
Sbjct: 189 VSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSVSYPREVESLSGLKTIAVACGVWHT 248

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           A +V+V  + + ++  L +G++FT GD      GH D    + +P  V  L      +V 
Sbjct: 249 AAIVEVIVTRSSSSVKLSAGKLFTWGDGDKHRLGHGDKETRL-KPTCVATLIDHDFYRVA 307

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
            G + T  LT  G V + G+  +GQLG+  + D   P  +        V+QIA G  ++ 
Sbjct: 308 CGHSLTVALTTSGQVLSMGNAVYGQLGNPHS-DGRIPCLVEDKIVGEQVLQIACGSYHVA 366

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
            +T    V+++G G+N  LGHG+  D   P  ++  + + +  +   A
Sbjct: 367 VLTNRSEVFTWGKGANGRLGHGDTEDRKVPTLVEALKDRAVRYIACGA 414



 Score = 43.9 bits (102), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 53/110 (48%), Gaps = 8/110 (7%)

Query: 125 LISNSSVFSCGSSLCGVLG--HGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSG 182
           L ++  V S G+++ G LG  H      C+   +I       V+Q++    H A +    
Sbjct: 316 LTTSGQVLSMGNAVYGQLGNPHSDGRIPCLVEDKI---VGEQVLQIACGSYHVAVLTNRS 372

Query: 183 QVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           +VFT G  ++   GH DT +R +  P LVEALK    + +  G NFT  +
Sbjct: 373 EVFTWGKGANGRLGHGDTEDRKV--PTLVEALKDRAVRYIACGANFTAAI 420


>gi|402901988|ref|XP_003913913.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
           [Papio anubis]
 gi|355754693|gb|EHH58594.1| hypothetical protein EGM_08474 [Macaca fascicularis]
          Length = 556

 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 96/218 (44%), Gaps = 4/218 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  +F  G++ CG LG G +    +   R++  S   +  +S  S  H       G+VFT
Sbjct: 69  NDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFT 127

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN  +   ++   L      +V  G   +  LT  G V   G N  G
Sbjct: 128 WGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 187

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T+++P P+ +    +   VV IA G    +AV   G VY +G   N  LG G  
Sbjct: 188 QVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSS 247

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            +  QP   +    +GI V RV+ G  H + L   G V
Sbjct: 248 GN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQV 283



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 92/187 (49%), Gaps = 12/187 (6%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G YH+L L S+  VF+ G +  G +G G    Q +            VV ++  +
Sbjct: 160 IEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ 219

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
                V+ +G+V+  G N +   G   + N+P   P  V AL+G+  ++V  G   T  L
Sbjct: 220 MCCMAVVDTGEVYVWGYNGNGQLGLGSSGNQPT--PCRVAALQGIRVQRVACGYAHTLVL 277

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDR--PTPKSIAPLEEVGSVVQIAAGPS--YMLAVTGN 287
           T  G V+  G+N++GQLG G+  ++  PTP ++    E   +++IAA  S     A T  
Sbjct: 278 TDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTV----EKDRIIEIAACHSTHTSAAKTQG 333

Query: 288 GVVYSFG 294
           G VY +G
Sbjct: 334 GHVYMWG 340



 Score = 40.4 bits (93), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 55/117 (47%), Gaps = 5/117 (4%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 287
           + T+   +   G+N  G LG GD      P+ +  L  +++ S +   +GP  +LA T  
Sbjct: 65  YTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIAS-LSYGSGPHIVLATT-E 122

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G V+++G  +   LG+G  +  L P  I T       V+ V+ G  H + L S G V
Sbjct: 123 GEVFTWGHNAYSQLGNGTTNHGLVPCQIST-NLSNKQVIEVACGSYHSLVLTSDGEV 178


>gi|159039902|ref|YP_001539155.1| chromosome condensation regulator RCC1 [Salinispora arenicola
           CNS-205]
 gi|157918737|gb|ABW00165.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
           CNS-205]
          Length = 546

 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 70/218 (32%), Positives = 104/218 (47%), Gaps = 5/218 (2%)

Query: 127 SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 186
           ++ ++ + GS+  G LG+G  TT   +   ++ P+    V ++A + H+  +  +G V  
Sbjct: 52  ASDTILAWGSNFFGELGNG-TTTNSSTPVDVSLPADTAAVAIAAGDAHSVALTAAGTVLA 110

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            GDNS    G   T      P  V    GV    V AG + +  LT  G V   G N+ G
Sbjct: 111 WGDNSHGQLGD-GTGADSLTPVGVSLPAGVTASAVAAGRDHSVALTSAGTVLAWGGNSFG 169

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           QLG G  +DR TP ++A L    +V  +AAG ++ +A+T  G V ++G      LG G  
Sbjct: 170 QLGDGTVVDRSTPVAVA-LPPSTTVTAVAAGATHSVALTSAGTVLAWGGNPFGQLGDGTV 228

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            D   P A+         V  V+AG  H VAL S+G V
Sbjct: 229 VDRSTPVAVA--LPPSTTVTAVAAGGNHSVALTSAGTV 264



 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 63/227 (27%), Positives = 94/227 (41%), Gaps = 11/227 (4%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  H++ L S  +V + G +  G LG G    +      +  P +  V  V+A  NH
Sbjct: 196 VAAGATHSVALTSAGTVLAWGGNPFGQLGDGTVVDRSTPV-AVALPPSTTVTAVAAGGNH 254

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR--PRLVEALKGVPCKQVTAGLNFTGFLT 232
           +  +  +G V   G N     G       + R  P +V    GV    V AG   +  LT
Sbjct: 255 SVALTSAGTVLAWGRN---FFGQLGDGTVVDRSTPTVVSLPAGVTASAVAAGRIHSLALT 311

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS-YMLAVTGNGVVY 291
             G V   G+NT GQLG G T    +      L    ++  I+A  S + +A+T  G   
Sbjct: 312 TAGGVLAWGNNTFGQLGDGTTTTS-STPVSVTLPAATTITAISARDSQHSVAMTSAGAAL 370

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           S+G      LG G       P  +      G+ V  ++AGD+H +AL
Sbjct: 371 SWGRNLRGQLGDGTTTTRSTP--VDVHLPTGVTVTAIAAGDDHSLAL 415


>gi|387541132|gb|AFJ71193.1| RCC1 and BTB domain-containing protein 2 [Macaca mulatta]
          Length = 551

 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 96/218 (44%), Gaps = 4/218 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  +F  G++ CG LG G +    +   R++  S   +  +S  S  H       G+VFT
Sbjct: 64  NDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFT 122

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN  +   ++   L      +V  G   +  LT  G V   G N  G
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 182

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T+++P P+ +    +   VV IA G    +AV   G VY +G   N  LG G  
Sbjct: 183 QVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSS 242

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            +  QP   +    +GI V RV+ G  H + L   G V
Sbjct: 243 GN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQV 278



 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 92/187 (49%), Gaps = 12/187 (6%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G YH+L L S+  VF+ G +  G +G G    Q +            VV ++  +
Sbjct: 155 IEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ 214

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
                V+ +G+V+  G N +   G   + N+P   P  V AL+G+  ++V  G   T  L
Sbjct: 215 MCCMAVVDTGEVYVWGYNGNGQLGLGSSGNQPT--PCRVAALQGIRVQRVACGYAHTLVL 272

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDR--PTPKSIAPLEEVGSVVQIAAGPS--YMLAVTGN 287
           T  G V+  G+N++GQLG G+  ++  PTP ++    E   +++IAA  S     A T  
Sbjct: 273 TDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTM----EKDRIIEIAACHSTHTSAAKTQG 328

Query: 288 GVVYSFG 294
           G VY +G
Sbjct: 329 GHVYMWG 335



 Score = 40.4 bits (93), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 55/117 (47%), Gaps = 5/117 (4%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 287
           + T+   +   G+N  G LG GD      P+ +  L  +++ S +   +GP  +LA T  
Sbjct: 60  YTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIAS-LSYGSGPHIVLATT-E 117

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G V+++G  +   LG+G  +  L P  I T       V+ V+ G  H + L S G V
Sbjct: 118 GEVFTWGHNAYSQLGNGTTNHGLVPCQIST-NLSNKQVIEVACGSYHSLVLTSDGEV 173


>gi|300798276|ref|NP_001179573.1| probable E3 ubiquitin-protein ligase HERC6 [Bos taurus]
          Length = 1016

 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 114/226 (50%), Gaps = 8/226 (3%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           ++ G+ H+L + +   VF+ G++  G LG G          +I   +   ++QV+    H
Sbjct: 80  VSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYH 139

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           +  + + GQVF+ G NS    G          P+ V +L+G+P  QV AG + +  L++ 
Sbjct: 140 SVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSLS 199

Query: 235 GHVHTCGSNTHGQL---GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           G     GSN+ GQL   G+   + R  P SI  L+ +G VV I+ G  +   +T +G V+
Sbjct: 200 GTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLG-VVSISCGYKHTAVLTQDGKVF 258

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           +FG  S   LGH    ++  P+ ++  R +G+ V ++  G +H +A
Sbjct: 259 TFGDNSYGQLGHDPTAEKRGPQLVE--RIEGL-VSQIDCGSDHTLA 301



 Score = 81.3 bits (199), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 62/187 (33%), Positives = 93/187 (49%), Gaps = 6/187 (3%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH++ +S +  VFS G++  G LG G E     S  R+       + QV+A  
Sbjct: 131 IQVACGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGG 190

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPI--FRPRLVEALKGVPCKQVTAGLNFTGF 230
           +H+  +  SG  F  G NS+        N P+  ++P  + ALK +    ++ G   T  
Sbjct: 191 HHSFALSLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAV 250

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA-VTGNGV 289
           LT  G V T G N++GQLGH  T ++  P+ +  +E  G V QI  G  + LA +   G 
Sbjct: 251 LTQDGKVFTFGDNSYGQLGHDPTAEKRGPQLVERIE--GLVSQIDCGSDHTLAYIYTTGQ 308

Query: 290 VYSFGSG 296
           V SFG G
Sbjct: 309 VVSFGRG 315



 Score = 79.0 bits (193), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 71/238 (29%), Positives = 112/238 (47%), Gaps = 13/238 (5%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG--PETTQCVSFTRINFPSAAHVVQVSA 170
           +Q  +G +H+LL+ S+ +V SCG +  G LG    P   Q     RI      +V  VS 
Sbjct: 26  LQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQP---ERIPALETLNVALVSC 82

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            + H+  V   G+VF  G  S    G  +     F P+ ++ L G+   QV  G   +  
Sbjct: 83  GKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVA 142

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
           L+  G V + G+N+HGQLG G     + +P+ +  LE +  + Q+AAG  +  A++ +G 
Sbjct: 143 LSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGHHSFALSLSGT 201

Query: 290 VYSFGSGSNFCL---GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            + +GS S   L   G+       +P +I   +  G  VV +S G +H   L   G V
Sbjct: 202 SFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLG--VVSISCGYKHTAVLTQDGKV 257



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/180 (30%), Positives = 99/180 (55%), Gaps = 6/180 (3%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           ++Q ++ E+H+  +L  G V +CGDNS    G + T R   +P  + AL+ +    V+ G
Sbjct: 25  LLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGE-QPERIPALETLNVALVSCG 83

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYMLA 283
              +  +  +G V   G+ + GQLG G+  +    PK I  L  +  ++Q+A G  + +A
Sbjct: 84  KEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGI-KIIQVACGHYHSVA 142

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           ++ +G V+S+G+ S+  LG G++   +  P+ +++   +GI + +V+AG  H  AL  SG
Sbjct: 143 LSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGHHSFALSLSG 200


>gi|402901986|ref|XP_003913912.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
           [Papio anubis]
          Length = 551

 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 96/218 (44%), Gaps = 4/218 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  +F  G++ CG LG G +    +   R++  S   +  +S  S  H       G+VFT
Sbjct: 64  NDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFT 122

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN  +   ++   L      +V  G   +  LT  G V   G N  G
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 182

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T+++P P+ +    +   VV IA G    +AV   G VY +G   N  LG G  
Sbjct: 183 QVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSS 242

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            +  QP   +    +GI V RV+ G  H + L   G V
Sbjct: 243 GN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQV 278



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 92/187 (49%), Gaps = 12/187 (6%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G YH+L L S+  VF+ G +  G +G G    Q +            VV ++  +
Sbjct: 155 IEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ 214

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
                V+ +G+V+  G N +   G   + N+P   P  V AL+G+  ++V  G   T  L
Sbjct: 215 MCCMAVVDTGEVYVWGYNGNGQLGLGSSGNQPT--PCRVAALQGIRVQRVACGYAHTLVL 272

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDR--PTPKSIAPLEEVGSVVQIAAGPS--YMLAVTGN 287
           T  G V+  G+N++GQLG G+  ++  PTP ++    E   +++IAA  S     A T  
Sbjct: 273 TDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTV----EKDRIIEIAACHSTHTSAAKTQG 328

Query: 288 GVVYSFG 294
           G VY +G
Sbjct: 329 GHVYMWG 335



 Score = 40.4 bits (93), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 55/117 (47%), Gaps = 5/117 (4%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 287
           + T+   +   G+N  G LG GD      P+ +  L  +++ S +   +GP  +LA T  
Sbjct: 60  YTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIAS-LSYGSGPHIVLATT-E 117

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G V+++G  +   LG+G  +  L P  I T       V+ V+ G  H + L S G V
Sbjct: 118 GEVFTWGHNAYSQLGNGTTNHGLVPCQIST-NLSNKQVIEVACGSYHSLVLTSDGEV 173


>gi|296486676|tpg|DAA28789.1| TPA: hect domain and RLD 6-like isoform 2 [Bos taurus]
          Length = 1016

 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 114/226 (50%), Gaps = 8/226 (3%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           ++ G+ H+L + +   VF+ G++  G LG G          +I   +   ++QV+    H
Sbjct: 80  VSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYH 139

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           +  + + GQVF+ G NS    G          P+ V +L+G+P  QV AG + +  L++ 
Sbjct: 140 SVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSLS 199

Query: 235 GHVHTCGSNTHGQL---GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           G     GSN+ GQL   G+   + R  P SI  L+ +G VV I+ G  +   +T +G V+
Sbjct: 200 GTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLG-VVSISCGYKHTAVLTQDGKVF 258

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           +FG  S   LGH    ++  P+ ++  R +G+ V ++  G +H +A
Sbjct: 259 TFGDNSYGQLGHDPTAEKRGPQLVE--RIEGL-VSQIDCGSDHTLA 301



 Score = 81.3 bits (199), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 62/187 (33%), Positives = 93/187 (49%), Gaps = 6/187 (3%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH++ +S +  VFS G++  G LG G E     S  R+       + QV+A  
Sbjct: 131 IQVACGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGG 190

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPI--FRPRLVEALKGVPCKQVTAGLNFTGF 230
           +H+  +  SG  F  G NS+        N P+  ++P  + ALK +    ++ G   T  
Sbjct: 191 HHSFALSLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAV 250

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA-VTGNGV 289
           LT  G V T G N++GQLGH  T ++  P+ +  +E  G V QI  G  + LA +   G 
Sbjct: 251 LTQDGKVFTFGDNSYGQLGHDPTAEKRGPQLVERIE--GLVSQIDCGSDHTLAYIYTTGQ 308

Query: 290 VYSFGSG 296
           V SFG G
Sbjct: 309 VVSFGRG 315



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 71/238 (29%), Positives = 112/238 (47%), Gaps = 13/238 (5%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG--PETTQCVSFTRINFPSAAHVVQVSA 170
           +Q  +G +H+LL+ S+ +V SCG +  G LG    P   Q     RI      +V  VS 
Sbjct: 26  LQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQP---ERIPALETLNVALVSC 82

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            + H+  V   G+VF  G  S    G  +     F P+ ++ L G+   QV  G   +  
Sbjct: 83  GKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVA 142

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
           L+  G V + G+N+HGQLG G     + +P+ +  LE +  + Q+AAG  +  A++ +G 
Sbjct: 143 LSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGHHSFALSLSGT 201

Query: 290 VYSFGSGSNFCL---GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            + +GS S   L   G+       +P +I   +  G  VV +S G +H   L   G V
Sbjct: 202 SFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLG--VVSISCGYKHTAVLTQDGKV 257



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/180 (30%), Positives = 99/180 (55%), Gaps = 6/180 (3%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           ++Q ++ E+H+  +L  G V +CGDNS    G + T R   +P  + AL+ +    V+ G
Sbjct: 25  LLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGE-QPERIPALETLNVALVSCG 83

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYMLA 283
              +  +  +G V   G+ + GQLG G+  +    PK I  L  +  ++Q+A G  + +A
Sbjct: 84  KEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGI-KIIQVACGHYHSVA 142

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           ++ +G V+S+G+ S+  LG G++   +  P+ +++   +GI + +V+AG  H  AL  SG
Sbjct: 143 LSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGHHSFALSLSG 200


>gi|442319170|ref|YP_007359191.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
 gi|441486812|gb|AGC43507.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
          Length = 1095

 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 72/221 (32%), Positives = 107/221 (48%), Gaps = 15/221 (6%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L ++ +V++ G +  G LG+G  TT   + T++  P    VV ++A   HA  V   G +
Sbjct: 464 LKADGTVWAWGDNANGQLGNG-STTDRSNPTQV--PGLTGVVSIAAGPGHALAVKADGTL 520

Query: 185 FTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           +T GDN++   G   T +RPI  P  V  + GV    V AGL  +  + + G V   GSN
Sbjct: 521 WTWGDNNTGQLGDGTTVDRPI--PTQVPGVTGVVS--VAAGLYHSLVVKVDGTVWAWGSN 576

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 303
             GQLG G T  RP P     L     VV I AG  + LA+  +G V+++G   +  LG+
Sbjct: 577 YEGQLGGGTTTIRPVPSQTPNLT---GVVAITAGLYHSLALKTDGTVWAWGYNLHGQLGN 633

Query: 304 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G    +  P  +  F       V + AG  H +A+ + G V
Sbjct: 634 GNTTTQQVPTQVPGFSGG----VSLGAGIYHSLAIKTDGSV 670



 Score = 77.8 bits (190), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 72/244 (29%), Positives = 109/244 (44%), Gaps = 28/244 (11%)

Query: 104 SDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA 163
           S +V  +AG     +G++   +++N  V++ G ++ G LG G  +   V       P  +
Sbjct: 348 SGVVAVAAG-----SGQHSVAVMANGEVWTWGHNVEGQLGEGSSSYSAV-------PKRS 395

Query: 164 HVV----QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 219
           H +     V+A   H       G V+  GDN+    G   T + +  P  V  L  +   
Sbjct: 396 HALVERTSVAAGRYHGLASKPDGTVWAWGDNAKGQLGDGTTAQRLL-PTQVPGLTNMVA- 453

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
            V AG + +  L   G V   G N +GQLG+G T DR  P  +  L     VV IAAGP 
Sbjct: 454 -VAAGHHSSLALKADGTVWAWGDNANGQLGNGSTTDRSNPTQVPGLT---GVVSIAAGPG 509

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH--VVA 337
           + LAV  +G ++++G  +   LG G   D   P  +         VV V+AG  H  VV 
Sbjct: 510 HALAVKADGTLWTWGDNNTGQLGDGTTVDRPIPTQVPGV----TGVVSVAAGLYHSLVVK 565

Query: 338 LDSS 341
           +D +
Sbjct: 566 VDGT 569



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 70/240 (29%), Positives = 110/240 (45%), Gaps = 25/240 (10%)

Query: 111 AGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETT-----QCVSFTRINFPSAAH 164
           +G + +  G YH+L I ++ SV++ G +  G LG G  T+     Q   FT ++F     
Sbjct: 649 SGGVSLGAGIYHSLAIKTDGSVWTWGYNYRGQLGDGTTTSRTTPTQVAGFTGVSF----- 703

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
              ++A E H+  +   G  +  G N     G   + R  + P L      V  + + AG
Sbjct: 704 ---LAAGEFHSVALRTDGTAWAWGSNDKGQLGD-GSARWHYAPTLSRL---VGARGLAAG 756

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             FT      G V   G NT+GQLG G TL   +P  ++ L +   V  +AAG  +++ V
Sbjct: 757 DRFTAARKSDGTVWAWGDNTYGQLGDGTTLATRSPAQVSGLTD---VEGLAAGEGHVVVV 813

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             +G V+++G+ +   LG G     L P  +         VV V+AG  H +AL + G V
Sbjct: 814 KMDGTVWTWGNNAKGQLGDGTTTRRLVPTQVPGL----TGVVAVAAGYAHSLALKADGTV 869



 Score = 71.6 bits (174), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 63/232 (27%), Positives = 108/232 (46%), Gaps = 13/232 (5%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G  H+L L ++ +V++ GS+  G LG G  T + +       P+   +  ++A  
Sbjct: 151 VRVAAGFSHSLALKTDGTVWAWGSNGAGRLGDGTTTQRLMPVQVQGLPT---IKAIAAGN 207

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  +G+V+  G NS+   G       +  P LV  L       ++AG N +    
Sbjct: 208 AHSLALDGTGRVWAWGSNSNGQLGDTTAGYRML-PALVPGL--TNATGLSAGSNHSLVRQ 264

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G     G+NT+GQLG G T  R  P+ ++ L  V  V+       + L +  +G V++
Sbjct: 265 ADGTTWVWGANTYGQLGDGTTTSRSAPQQVSGLAGVDGVL---GAELHSLVLKSDGTVWT 321

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           +GS     LG G Q   L P  +Q     G+  V   +G +H VA+ ++G V
Sbjct: 322 WGSNQRGQLGDGTQEQRLVP--VQVMGLSGVVAVAAGSG-QHSVAVMANGEV 370



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 59/188 (31%), Positives = 89/188 (47%), Gaps = 18/188 (9%)

Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVP 217
           +A+ +  V+A  +H   V   G V+  GDN+    G+   +D   P+    L        
Sbjct: 46  TASRLGLVAAGRHHTLAVRSDGTVWAWGDNAYGQLGNGSLQDQRVPVRAWGLWN------ 99

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG 277
              V AG   +  +   G V T G N  GQLG G T  R  P  +  L EV   V++AAG
Sbjct: 100 ISAVGAGDLHSLAMKSDGTVWTWGGNNFGQLGDGTTTGRQAPVQVPGLGEV---VRVAAG 156

Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVV 336
            S+ LA+  +G V+++GS     LG G     L P  +Q     G+  ++ ++AG+ H +
Sbjct: 157 FSHSLALKTDGTVWAWGSNGAGRLGDGTTTQRLMPVQVQ-----GLPTIKAIAAGNAHSL 211

Query: 337 ALDSSGYV 344
           ALD +G V
Sbjct: 212 ALDGTGRV 219



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 91/206 (44%), Gaps = 16/206 (7%)

Query: 114  MQITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            + + +G YH L   ++ ++++ G +  G LG G  TT+         PS + VV +SA+ 
Sbjct: 901  LSMASGTYHGLARKADGTLWAWGYNAHGQLGIGTTTTRLAPTL---VPSLSGVVSLSATH 957

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNR---PIFRPRLVEALKGVPCKQVTAGLNFTG 229
             H+  +   G V+  G NS+   G   T     P   P L         K V+AG  ++ 
Sbjct: 958  QHSLALKPDGTVWAWGYNSNGQLGDGTTTTRHVPTQAPSLSS------VKAVSAGFEYSL 1011

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             +   G V + G N  GQLG G    R TP  +A L    SV  + A  ++ L V+ +G 
Sbjct: 1012 AVKADGTVWSWGINDRGQLGSGTATPRATPTQVAGLN---SVTLLLAARAHALVVSADGT 1068

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAI 315
            +  FG      LG G+    L P  +
Sbjct: 1069 MRGFGDNEAGQLGAGDTLIRLAPNQV 1094



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 61/232 (26%), Positives = 101/232 (43%), Gaps = 23/232 (9%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINF-PSAAHVVQ---VSA 170
           +  G +H++ L ++ + ++ GS+  G LG G          R ++ P+ + +V    ++A
Sbjct: 704 LAAGEFHSVALRTDGTAWAWGSNDKGQLGDGSA--------RWHYAPTLSRLVGARGLAA 755

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            +   A     G V+  GDN+    G   T      P  V  L  V  + + AG      
Sbjct: 756 GDRFTAARKSDGTVWAWGDNTYGQLGD-GTTLATRSPAQVSGLTDV--EGLAAGEGHVVV 812

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           + + G V T G+N  GQLG G T  R  P  +  L     VV +AAG ++ LA+  +G V
Sbjct: 813 VKMDGTVWTWGNNAKGQLGDGTTTRRLVPTQVPGLT---GVVAVAAGYAHSLALKADGTV 869

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           + +G      LG G     + P   Q        V+ +++G  H +A  + G
Sbjct: 870 WGWGENIYGQLGDGTTTQRVAPTQAQGL----TVVLSMASGTYHGLARKADG 917


>gi|297800804|ref|XP_002868286.1| hypothetical protein ARALYDRAFT_493465 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297314122|gb|EFH44545.1| hypothetical protein ARALYDRAFT_493465 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1867

 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 66/233 (28%), Positives = 107/233 (45%), Gaps = 16/233 (6%)

Query: 114  MQITTGRYHTLL-ISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPS--AA 163
            + +  G +H+ L  +N  +F+ G    GVLGHG       P+  + +S  +    +    
Sbjct: 1191 LSVACGTWHSALATANGKLFTFGDGAFGVLGHGDRESVSYPKEVKMLSGLKTMKVACGVW 1250

Query: 164  HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
            H V +    N     + S ++FT GD      GH +    +  P  V +L     +Q+  
Sbjct: 1251 HTVAIVEVMNQTGTSMSSKKLFTWGDGDKNRLGHGNKETYLL-PTCVSSLIDYNFQQIAC 1309

Query: 224  GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYML 282
            G   T  LT  GHV T G  +HGQLG  ++ D   P  +     VG  V+ I+ G  ++ 
Sbjct: 1310 GHTLTVALTTSGHVFTMGGTSHGQLGSSNS-DGKLP-CLVQDRLVGEFVEEISCGDHHVA 1367

Query: 283  AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
             +T    V+++G GSN  LGHG++ D   P  ++  + +  HV  +S  D+ V
Sbjct: 1368 VLTSRSEVFTWGKGSNGRLGHGDKEDRKTPTLVEALKER--HVKSISCADQSV 1418



 Score = 74.3 bits (181), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 52/175 (29%), Positives = 83/175 (47%), Gaps = 5/175 (2%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            + ++    H A V + G+VFT G+ +    GH      + RP+LVE L       V  G 
Sbjct: 1084 IDIACGVRHIALVTRQGEVFTWGEEAGGRLGH-GIQVDVSRPKLVEFLALTNIDFVACGE 1142

Query: 226  NFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
              T  ++  G + T G   H  G LGHG  L    PK ++   E   V+ +A G  +   
Sbjct: 1143 YHTCAVSTSGDLFTWGDGIHNVGLLGHGSDLSHWIPKRVSGPVEGLQVLSVACGTWHSAL 1202

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             T NG +++FG G+   LGHG++     P+ ++     G+  ++V+ G  H VA+
Sbjct: 1203 ATANGKLFTFGDGAFGVLGHGDRESVSYPKEVKML--SGLKTMKVACGVWHTVAI 1255



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/243 (28%), Positives = 111/243 (45%), Gaps = 19/243 (7%)

Query: 116  ITTGRYHTLLISNS-SVFSCGSSL--CGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
            +  G YHT  +S S  +F+ G  +   G+LGHG + +  +   R++ P     V+ V+  
Sbjct: 1138 VACGEYHTCAVSTSGDLFTWGDGIHNVGLLGHGSDLSHWIP-KRVSGPVEGLQVLSVACG 1196

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG------- 224
              H+A    +G++FT GD +    GH D    +  P+ V+ L G+   +V  G       
Sbjct: 1197 TWHSALATANGKLFTFGDGAFGVLGHGD-RESVSYPKEVKMLSGLKTMKVACGVWHTVAI 1255

Query: 225  ---LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
               +N TG       + T G     +LGHG+      P  ++ L +  +  QIA G +  
Sbjct: 1256 VEVMNQTGTSMSSKKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDY-NFQQIACGHTLT 1314

Query: 282  LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
            +A+T +G V++ G  S+  LG      +L P  +Q  R  G  V  +S GD HV  L S 
Sbjct: 1315 VALTTSGHVFTMGGTSHGQLGSSNSDGKL-PCLVQD-RLVGEFVEEISCGDHHVAVLTSR 1372

Query: 342  GYV 344
              V
Sbjct: 1373 SEV 1375



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/244 (25%), Positives = 103/244 (42%), Gaps = 30/244 (12%)

Query: 120  RYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSASE 172
            R+  L+     VF+ G    G LGHG       P+  + ++ T I+F        V+  E
Sbjct: 1091 RHIALVTRQGEVFTWGEEAGGRLGHGIQVDVSRPKLVEFLALTNIDF--------VACGE 1142

Query: 173  NHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
             H   V  SG +FT GD  ++    GH          R+   ++G+    V  G   +  
Sbjct: 1143 YHTCAVSTSGDLFTWGDGIHNVGLLGHGSDLSHWIPKRVSGPVEGLQVLSVACGTWHSAL 1202

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV------ 284
             T  G + T G    G LGHGD      PK +  L  + + +++A G  + +A+      
Sbjct: 1203 ATANGKLFTFGDGAFGVLGHGDRESVSYPKEVKMLSGLKT-MKVACGVWHTVAIVEVMNQ 1261

Query: 285  TGNGV----VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            TG  +    ++++G G    LGHG +   L P  + +         +++ G    VAL +
Sbjct: 1262 TGTSMSSKKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFQ--QIACGHTLTVALTT 1319

Query: 341  SGYV 344
            SG+V
Sbjct: 1320 SGHV 1323


>gi|126272574|ref|XP_001362426.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Monodelphis domestica]
          Length = 1057

 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 107/226 (47%), Gaps = 7/226 (3%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G ++    G   T   I  PR +++L  +   Q+  G   +  L+    V +
Sbjct: 101 DKGQVYAWGLDTDGQLGLPGTEEYIKVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFS 160

Query: 240 CGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N HGQLG G  L  +  P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKHGQLGLGFELKSQSAPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V
Sbjct: 220 GQLGLNDENDRFVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGV 263



 Score = 81.6 bits (200), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 70/206 (33%), Positives = 98/206 (47%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QI  G YH+L +S  S VFS G +  G LG G E     +   I        +QV+A  
Sbjct: 140 VQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKSQSAPQLIKSLLGIPFMQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   F P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-FVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 71.6 bits (174), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 67/213 (31%), Positives = 99/213 (46%), Gaps = 9/213 (4%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 253
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G +T GQLG   T
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGT 121

Query: 254 LDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
            +    P++I  L ++  +VQIA G  + LA++    V+S+G   +  LG G E   +  
Sbjct: 122 EEYIKVPRNIKSLTDI-QIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKSQSA 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           P+ I++    GI  ++V+AG  H   L  SG +
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAI 211



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 54/217 (24%), Positives = 99/217 (45%), Gaps = 7/217 (3%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P+  +SL D+   Q+   +     +S+  ++    + N + +  L F    + +  ++++
Sbjct: 128 PRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQ-NKHGQLGLGFELKSQSAPQLIKS 186

Query: 110 SAG--NMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV 166
             G   MQ+  G  H+ +++ S ++F  G +  G LG   E  + V    +    +  +V
Sbjct: 187 LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVP-NLLKSLRSQKIV 245

Query: 167 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
            +   E+H A + + G VFT G       GH  T+  I  PR V  L G    Q+  G  
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKVFELMGSIVTQIACGRQ 304

Query: 227 FT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
            T  F+   G +++ G   +GQLG G T +R +P ++
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341


>gi|126272576|ref|XP_001362510.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Monodelphis domestica]
          Length = 1049

 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 107/226 (47%), Gaps = 7/226 (3%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G ++    G   T   I  PR +++L  +   Q+  G   +  L+    V +
Sbjct: 101 DKGQVYAWGLDTDGQLGLPGTEEYIKVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFS 160

Query: 240 CGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N HGQLG G  L  +  P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKHGQLGLGFELKSQSAPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V
Sbjct: 220 GQLGLNDENDRFVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGV 263



 Score = 81.6 bits (200), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 70/206 (33%), Positives = 98/206 (47%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QI  G YH+L +S  S VFS G +  G LG G E     +   I        +QV+A  
Sbjct: 140 VQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKSQSAPQLIKSLLGIPFMQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   F P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-FVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 71.6 bits (174), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 67/213 (31%), Positives = 99/213 (46%), Gaps = 9/213 (4%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 253
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G +T GQLG   T
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGT 121

Query: 254 LDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
            +    P++I  L ++  +VQIA G  + LA++    V+S+G   +  LG G E   +  
Sbjct: 122 EEYIKVPRNIKSLTDI-QIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKSQSA 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           P+ I++    GI  ++V+AG  H   L  SG +
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAI 211



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 54/217 (24%), Positives = 99/217 (45%), Gaps = 7/217 (3%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P+  +SL D+   Q+   +     +S+  ++    + N + +  L F    + +  ++++
Sbjct: 128 PRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQ-NKHGQLGLGFELKSQSAPQLIKS 186

Query: 110 SAG--NMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV 166
             G   MQ+  G  H+ +++ S ++F  G +  G LG   E  + V    +    +  +V
Sbjct: 187 LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVP-NLLKSLRSQKIV 245

Query: 167 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
            +   E+H A + + G VFT G       GH  T+  I  PR V  L G    Q+  G  
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKVFELMGSIVTQIACGRQ 304

Query: 227 FT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
            T  F+   G +++ G   +GQLG G T +R +P ++
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341


>gi|218189748|gb|EEC72175.1| hypothetical protein OsI_05225 [Oryza sativa Indica Group]
          Length = 1093

 Score = 82.0 bits (201), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 95/185 (51%), Gaps = 7/185 (3%)

Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
           + F     V  +S    HAA V + G++++ G+ S    GH   +  + +P+L+++L  +
Sbjct: 305 LEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGH-GVDCDVAQPKLIDSLAHM 363

Query: 217 PCKQVTAGLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQ 273
             + V  G   T  +T+ G ++T G  T   G LGHG+ +    PK +  PLE +  V  
Sbjct: 364 NIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGPLEGI-HVSS 422

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I+ GP +   VT  G +++FG GS   LGHG++     PR +++   KG+  VR + G  
Sbjct: 423 ISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESL--KGLRTVRAACGVW 480

Query: 334 HVVAL 338
           H  A+
Sbjct: 481 HTAAV 485



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 68/229 (29%), Positives = 103/229 (44%), Gaps = 26/229 (11%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I+ G +HT L++++  +F+ G    GVLGHG   +  V    +        V+ +    H
Sbjct: 423 ISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVP-REVESLKGLRTVRAACGVWH 481

Query: 175 AAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            A V++            SG++FT GD      GH D +   F P  V AL      QV 
Sbjct: 482 TAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDS-RFVPTCVAALVEPNFCQVA 540

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAG 277
            G   T  LT  GHV+T GS  +GQLG+      P    + P+   G      V +I+ G
Sbjct: 541 CGHCLTVALTTSGHVYTMGSAVYGQLGN------PQADGLLPVRVEGKLHKNFVEEISCG 594

Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
             ++  +T    VY++G G+N  LGHG   D+  P  ++  + K +  V
Sbjct: 595 AYHVAVLTSRTEVYTWGKGANGRLGHGGTDDKNTPTLVEALKDKQVRSV 643



 Score = 55.1 bits (131), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 69/138 (50%), Gaps = 4/138 (2%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E    +  + ++ G      +T +G +++ G  + G+LGHG   D   PK I  L 
Sbjct: 302 PKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLA 361

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPRAIQTFRRKGIH 324
            + ++  +A G  +  AVT +G +Y++G G+  F  LGHG       P+ +     +GIH
Sbjct: 362 HM-NIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDG-PLEGIH 419

Query: 325 VVRVSAGDEHVVALDSSG 342
           V  +S G  H   + S+G
Sbjct: 420 VSSISCGPWHTALVTSAG 437


>gi|323450026|gb|EGB05910.1| hypothetical protein AURANDRAFT_66097 [Aureococcus anophagefferens]
          Length = 1340

 Score = 82.0 bits (201), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 69/235 (29%), Positives = 111/235 (47%), Gaps = 21/235 (8%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLC--GVLGHGPETTQCVSFTRINFPS-----AAHVVQ 167
           +  G  HT++++ + ++ +CG+     G LG GP         R++ P+         + 
Sbjct: 81  VAAGTSHTVVVAHDGTLRACGTDPTRRGFLGQGP-------VFRVHRPARVPAGGLRFIS 133

Query: 168 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
           V+    H   +  SG+V++ G       GH D       PR V+AL G     V+ G   
Sbjct: 134 VATHSFHTLALTASGEVYSFGHGGCGQLGHGDQESSA-TPRRVDALAGAFVVAVSCGQQH 192

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           +  LT RG  +  GS   G+ G GD   R  P+ +A + E   V  + AG  + LA T +
Sbjct: 193 SLALTDRGAPYAFGSGFGGKTGLGDQRSRSLPRRVAGIPE--PVAVLTAGAHHSLAATTS 250

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           G VY+FGS  +  LG  E+ D   PR +     +   VV++S G+ H +A+D++G
Sbjct: 251 GAVYAFGSNVHLQLGLPERGDAYAPRRVDALDGR---VVQLSGGEHHSLAVDAAG 302



 Score = 57.8 bits (138), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 60/194 (30%), Positives = 80/194 (41%), Gaps = 38/194 (19%)

Query: 168 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR------PIFRPRLVEALKGVPCKQV 221
           V+A  +H   V   G +  CG +         T R      P+FR          P +  
Sbjct: 81  VAAGTSHTVVVAHDGTLRACGTDP--------TRRGFLGQGPVFRVHR-------PARVP 125

Query: 222 TAGLNF---------TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
             GL F         T  LT  G V++ G    GQLGHGD     TP+ +  L     VV
Sbjct: 126 AGGLRFISVATHSFHTLALTASGEVYSFGHGGCGQLGHGDQESSATPRRVDALAGA-FVV 184

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI--HVVRVSA 330
            ++ G  + LA+T  G  Y+FGSG     G G+Q     PR     R  GI   V  ++A
Sbjct: 185 AVSCGQQHSLALTDRGAPYAFGSGFGGKTGLGDQRSRSLPR-----RVAGIPEPVAVLTA 239

Query: 331 GDEHVVALDSSGYV 344
           G  H +A  +SG V
Sbjct: 240 GAHHSLAATTSGAV 253



 Score = 38.5 bits (88), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 46/190 (24%), Positives = 82/190 (43%), Gaps = 15/190 (7%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + ++ G+ H+L +++  + ++ GS   G  G G + ++ +       P    V  ++A  
Sbjct: 184 VAVSCGQQHSLALTDRGAPYAFGSGFGGKTGLGDQRSRSLPRRVAGIPE--PVAVLTAGA 241

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           +H+     SG V+  G N     G  +     + PR V+AL G    Q++ G + +  + 
Sbjct: 242 HHSLAATTSGAVYAFGSNVHLQLGLPERGD-AYAPRRVDALDGR-VVQLSGGEHHSLAVD 299

Query: 233 IRGHVHTCGSN---------THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
             G  ++ G+            G LGH    D   P+ +  L  V   V  AAG  + L 
Sbjct: 300 AAGACYSWGAGEGRERTSVMVGGFLGHRSLDDAARPRRVEGLAGV-RAVDCAAGALHSLV 358

Query: 284 VTGNGVVYSF 293
           ++  G VYSF
Sbjct: 359 LSAAGDVYSF 368


>gi|242089177|ref|XP_002440421.1| hypothetical protein SORBIDRAFT_09g000710 [Sorghum bicolor]
 gi|241945706|gb|EES18851.1| hypothetical protein SORBIDRAFT_09g000710 [Sorghum bicolor]
          Length = 916

 Score = 82.0 bits (201), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 87/176 (49%), Gaps = 5/176 (2%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  V     HAA V+++G+VFT G++S    GH  T     RPRLVE+L       V  G
Sbjct: 79  VYHVDCGVKHAALVMKNGEVFTWGEDSGGRLGH-GTREDCVRPRLVESLTVSNVDFVACG 137

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
              T  +T  G +++ G  TH  G LGHG+ +    PK ++   E   V  ++ G  +  
Sbjct: 138 EFHTCAVTTTGELYSWGDGTHNVGLLGHGNDVGHWIPKRVSGALEGLQVAYVSCGTWHTA 197

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            +T  G +++FG GS   LGHG+      PR +++    G+  + V+ G  H  A+
Sbjct: 198 LITSMGQLFTFGDGSFGVLGHGDLKSVSYPREVESL--SGLKTIAVACGVWHTAAI 251



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/224 (27%), Positives = 105/224 (46%), Gaps = 15/224 (6%)

Query: 116 ITTGRYHTLLISN-SSVFSCGSSLCGVLGHG-------PETTQCVSFTRI-----NFPSA 162
           ++ G +HT LI++   +F+ G    GVLGHG       P   + +S  +           
Sbjct: 189 VSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSVSYPREVESLSGLKTIAVACGVWHT 248

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           A +V+V  + + ++  L +G++FT GD      GH D    + +P  V  L      +V 
Sbjct: 249 AAIVEVIVTRSSSSVKLSAGKLFTWGDGDKHRLGHGDKETRL-KPTCVATLIDHDFYRVA 307

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
            G + T  LT  G V + G+  +GQLG+  + D   P  +        V+QIA G  ++ 
Sbjct: 308 CGHSLTVALTTSGQVLSMGNAVYGQLGNPHS-DGRIPCLVEDKIVGEQVIQIACGSYHVA 366

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
            +TG   V+++G G+N  LGHG+  D   P  ++  + + +  +
Sbjct: 367 VLTGRNEVFTWGKGANGRLGHGDIEDRKVPTLVEVLKDRAVRYI 410



 Score = 74.3 bits (181), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 63/240 (26%), Positives = 106/240 (44%), Gaps = 19/240 (7%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           ++  L++ N  VF+ G    G LGHG     CV    +   + ++V  V+  E H   V 
Sbjct: 87  KHAALVMKNGEVFTWGEDSGGRLGHGTR-EDCVRPRLVESLTVSNVDFVACGEFHTCAVT 145

Query: 180 QSGQVFTCGDNSSFC--CGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
            +G++++ GD +      GH +        R+  AL+G+    V+ G   T  +T  G +
Sbjct: 146 TTGELYSWGDGTHNVGLLGHGNDVGHWIPKRVSGALEGLQVAYVSCGTWHTALITSMGQL 205

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT------------ 285
            T G  + G LGHGD      P+ +  L  + ++  +A G  +  A+             
Sbjct: 206 FTFGDGSFGVLGHGDLKSVSYPREVESLSGLKTIA-VACGVWHTAAIVEVIVTRSSSSVK 264

Query: 286 -GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              G ++++G G    LGHG++   L+P  + T      +  RV+ G    VAL +SG V
Sbjct: 265 LSAGKLFTWGDGDKHRLGHGDKETRLKPTCVATLIDHDFY--RVACGHSLTVALTTSGQV 322



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 66/141 (46%), Gaps = 4/141 (2%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           I  P+ +E+   +    V  G+     +   G V T G ++ G+LGHG   D   P+ + 
Sbjct: 65  ILLPKPLESNLVLDVYHVDCGVKHAALVMKNGEVFTWGEDSGGRLGHGTREDCVRPRLVE 124

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRK 321
            L  V +V  +A G  +  AVT  G +YS+G G++    LGHG       P+ + +   +
Sbjct: 125 SL-TVSNVDFVACGEFHTCAVTTTGELYSWGDGTHNVGLLGHGNDVGHWIPKRV-SGALE 182

Query: 322 GIHVVRVSAGDEHVVALDSSG 342
           G+ V  VS G  H   + S G
Sbjct: 183 GLQVAYVSCGTWHTALITSMG 203



 Score = 40.8 bits (94), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 51/110 (46%), Gaps = 8/110 (7%)

Query: 125 LISNSSVFSCGSSLCGVLG--HGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSG 182
           L ++  V S G+++ G LG  H      C+   +I       V+Q++    H A +    
Sbjct: 316 LTTSGQVLSMGNAVYGQLGNPHSDGRIPCLVEDKI---VGEQVIQIACGSYHVAVLTGRN 372

Query: 183 QVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           +VFT G  ++   GH D  +R +  P LVE LK    + +  G NFT  +
Sbjct: 373 EVFTWGKGANGRLGHGDIEDRKV--PTLVEVLKDRAVRYIACGANFTAAI 420


>gi|57899942|dbj|BAD87854.1| putative ZR1 protein [Oryza sativa Japonica Group]
          Length = 1091

 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 95/185 (51%), Gaps = 7/185 (3%)

Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
           + F     V  +S    HAA V + G++++ G+ S    GH   +  + +P+L+++L  +
Sbjct: 305 LEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGH-GVDCDVAQPKLIDSLAHM 363

Query: 217 PCKQVTAGLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQ 273
             + V  G   T  +T+ G ++T G  T   G LGHG+ +    PK +  PLE +  V  
Sbjct: 364 NIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGPLEGI-HVSS 422

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I+ GP +   VT  G +++FG GS   LGHG++     PR +++   KG+  VR + G  
Sbjct: 423 ISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESL--KGLRTVRAACGVW 480

Query: 334 HVVAL 338
           H  A+
Sbjct: 481 HTAAV 485



 Score = 77.8 bits (190), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 68/229 (29%), Positives = 103/229 (44%), Gaps = 26/229 (11%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I+ G +HT L++++  +F+ G    GVLGHG   +  V    +        V+ +    H
Sbjct: 423 ISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVP-REVESLKGLRTVRAACGVWH 481

Query: 175 AAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            A V++            SG++FT GD      GH D +   F P  V AL      QV 
Sbjct: 482 TAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDS-RFVPTCVAALVEPNFCQVA 540

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAG 277
            G   T  LT  GHV+T GS  +GQLG+      P    + P+   G      V +I+ G
Sbjct: 541 CGHCLTVALTTSGHVYTMGSAVYGQLGN------PQADGLLPVRVEGKLHKNFVEEISCG 594

Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
             ++  +T    VY++G G+N  LGHG   D+  P  ++  + K +  V
Sbjct: 595 AYHVAVLTSRTEVYTWGKGANGRLGHGGTDDKNTPTLVEALKDKQVRSV 643



 Score = 55.1 bits (131), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 69/138 (50%), Gaps = 4/138 (2%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E    +  + ++ G      +T +G +++ G  + G+LGHG   D   PK I  L 
Sbjct: 302 PKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLA 361

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPRAIQTFRRKGIH 324
            + ++  +A G  +  AVT +G +Y++G G+  F  LGHG       P+ +     +GIH
Sbjct: 362 HM-NIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDG-PLEGIH 419

Query: 325 VVRVSAGDEHVVALDSSG 342
           V  +S G  H   + S+G
Sbjct: 420 VSSISCGPWHTALVTSAG 437


>gi|408501212|ref|YP_006865131.1| RCC1-like protein [Bifidobacterium asteroides PRL2011]
 gi|408466036|gb|AFU71565.1| RCC1-like protein [Bifidobacterium asteroides PRL2011]
          Length = 1186

 Score = 82.0 bits (201), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 71/255 (27%), Positives = 116/255 (45%), Gaps = 26/255 (10%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA-------HV 165
           +Q++ G YH+L I S+   ++ G S  G LG+   T       R+  PS+          
Sbjct: 736 VQVSGGYYHSLAIGSDGYAYAWGRSDSGQLGNNTTTAYSTVPVRVRDPSSPTDKNKGLKA 795

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCG---HRDTNRPIFRPRLVEALKGVPCKQVT 222
           +QVSA  +H+  V   G  +  G N S   G   +     P+   +  +A       QV+
Sbjct: 796 IQVSAGGDHSLAVGSDGNAYAWGSNGSGQLGDGTYTTRTTPVKVSKPADAPTNFTYVQVS 855

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-----TPKSIAPLEEVGSVVQIAAG 277
            G N +  +   G+ + CG NT+G+LG G +  R      +  + AP + +   +QI+AG
Sbjct: 856 GGYNDSLAIDSDGNAYGCGDNTYGKLGDGTSTSRAMLVKVSKPADAPTDFI--YMQISAG 913

Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQ----HDELQPR----AIQTFRRKGIHVVRVS 329
             + LAV  +G  Y++G   +  LG+       H  +  R    +  T   KG+   +VS
Sbjct: 914 AGHSLAVGSDGYAYAWGRSDSGQLGNNTSGFGAHSSVPVRVRDPSSPTDENKGLKATQVS 973

Query: 330 AGDEHVVALDSSGYV 344
            G +H +A+ S GYV
Sbjct: 974 GGGDHSLAVGSDGYV 988



 Score = 48.9 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 62/236 (26%), Positives = 101/236 (42%), Gaps = 23/236 (9%)

Query: 127 SNSSVFSCGSSLCGVLGHGPETTQC--VSFTR-INFPSAAHVVQVSASENHAAFVLQSGQ 183
           S+ + ++ G +  G LG G  TT+   V  ++ +  P+    VQVS    H+  +   G 
Sbjct: 694 SDGNAYAWGYNRYGQLGDGTTTTRTTPVKVSKPVGAPTDFTYVQVSGGYYHSLAIGSDGY 753

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLV-------EALKGVPCKQVTAGLNFTGFLTIRGH 236
            +  G + S   G+  T      P  V       +  KG+   QV+AG + +  +   G+
Sbjct: 754 AYAWGRSDSGQLGNNTTTAYSTVPVRVRDPSSPTDKNKGLKAIQVSAGGDHSLAVGSDGN 813

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG---SVVQIAAGPSYMLAVTGNGVVYSF 293
            +  GSN  GQLG G    R TP  ++   +     + VQ++ G +  LA+  +G  Y  
Sbjct: 814 AYAWGSNGSGQLGDGTYTTRTTPVKVSKPADAPTNFTYVQVSGGYNDSLAIDSDGNAYGC 873

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV------VRVSAGDEHVVALDSSGY 343
           G  +   LG G        RA+     K          +++SAG  H +A+ S GY
Sbjct: 874 GDNTYGKLGDGTS----TSRAMLVKVSKPADAPTDFIYMQISAGAGHSLAVGSDGY 925



 Score = 45.1 bits (105), Expect = 0.054,   Method: Composition-based stats.
 Identities = 52/210 (24%), Positives = 83/210 (39%), Gaps = 35/210 (16%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFT--RINFPSAA------- 163
            MQI+ G  H+L + S+   ++ G S  G LG+        S    R+  PS+        
Sbjct: 908  MQISAGAGHSLAVGSDGYAYAWGRSDSGQLGNNTSGFGAHSSVPVRVRDPSSPTDENKGL 967

Query: 164  HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV---------EALK 214
               QVS   +H+  V   G V+  G N+    G+  T+     P  V         +  K
Sbjct: 968  KATQVSGGGDHSLAVGSDGYVYAWGINNYGQLGNNTTSGSTANPVPVHVRDPANSADTSK 1027

Query: 215  GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 274
            G+   QV  G +F+  +   G+ +  G+N +GQLG+  T  +  P  +            
Sbjct: 1028 GLQATQVKVGYDFSLAMGSDGNAYAWGANGNGQLGNDTTNTKLVPVPVV----------- 1076

Query: 275  AAGPSYMLAVTGNGVVYSFGSGSNFCLGHG 304
                 + L +   GV +   SG+N   G G
Sbjct: 1077 -----FNLQLVITGVKFDTDSGTNLTRGDG 1101


>gi|297598338|ref|NP_001045419.2| Os01g0952300 [Oryza sativa Japonica Group]
 gi|255674079|dbj|BAF07333.2| Os01g0952300 [Oryza sativa Japonica Group]
          Length = 1133

 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 95/185 (51%), Gaps = 7/185 (3%)

Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
           + F     V  +S    HAA V + G++++ G+ S    GH   +  + +P+L+++L  +
Sbjct: 305 LEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGH-GVDCDVAQPKLIDSLAHM 363

Query: 217 PCKQVTAGLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQ 273
             + V  G   T  +T+ G ++T G  T   G LGHG+ +    PK +  PLE +  V  
Sbjct: 364 NIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGPLEGI-HVSS 422

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I+ GP +   VT  G +++FG GS   LGHG++     PR +++   KG+  VR + G  
Sbjct: 423 ISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESL--KGLRTVRAACGVW 480

Query: 334 HVVAL 338
           H  A+
Sbjct: 481 HTAAV 485



 Score = 77.8 bits (190), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 68/229 (29%), Positives = 103/229 (44%), Gaps = 26/229 (11%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I+ G +HT L++++  +F+ G    GVLGHG   +  V    +        V+ +    H
Sbjct: 423 ISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVP-REVESLKGLRTVRAACGVWH 481

Query: 175 AAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            A V++            SG++FT GD      GH D +   F P  V AL      QV 
Sbjct: 482 TAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDS-RFVPTCVAALVEPNFCQVA 540

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAG 277
            G   T  LT  GHV+T GS  +GQLG+      P    + P+   G      V +I+ G
Sbjct: 541 CGHCLTVALTTSGHVYTMGSAVYGQLGN------PQADGLLPVRVEGKLHKNFVEEISCG 594

Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
             ++  +T    VY++G G+N  LGHG   D+  P  ++  + K +  V
Sbjct: 595 AYHVAVLTSRTEVYTWGKGANGRLGHGGTDDKNTPTLVEALKDKQVRSV 643



 Score = 55.1 bits (131), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 69/138 (50%), Gaps = 4/138 (2%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E    +  + ++ G      +T +G +++ G  + G+LGHG   D   PK I  L 
Sbjct: 302 PKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLA 361

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPRAIQTFRRKGIH 324
            + ++  +A G  +  AVT +G +Y++G G+  F  LGHG       P+ +     +GIH
Sbjct: 362 HM-NIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDG-PLEGIH 419

Query: 325 VVRVSAGDEHVVALDSSG 342
           V  +S G  H   + S+G
Sbjct: 420 VSSISCGPWHTALVTSAG 437


>gi|302855419|ref|XP_002959204.1| hypothetical protein VOLCADRAFT_70529 [Volvox carteri f.
           nagariensis]
 gi|300255434|gb|EFJ39741.1| hypothetical protein VOLCADRAFT_70529 [Volvox carteri f.
           nagariensis]
          Length = 367

 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 72/236 (30%), Positives = 105/236 (44%), Gaps = 7/236 (2%)

Query: 109 TSAGNMQITTGRYHTLLI--SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV 166
           T AG   +  G  +T+ +  S   V+S G    G LGHG +         I F S   V 
Sbjct: 63  TDAGIESVVCGAEYTIAVAPSRGQVYSWGWGDFGRLGHG-DCNDVFVPRPIEFFSGRPVH 121

Query: 167 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
           +V+  + H   V   G++FT G N +   G   TN     P+LV AL+G   + V  G  
Sbjct: 122 RVACGDTHTLVVAGEGELFTFGRNQNGQLGLGHTN-DCLSPQLVVALQGERVRSVACGSE 180

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
            +   T  G V + G   +G LG G++ DR  P  +  LE +  +V    G  +   V+ 
Sbjct: 181 HSLAATESGTVFSWGWGRYGNLGDGESQDRYLPTRVVGLEGI-RMVSAECGWRHSAVVSE 239

Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           +G V++FG      LGHG+  D   P  +   R     +  V+ G  H +A DSSG
Sbjct: 240 DGRVFTFGWSKYGQLGHGDHTDRTVPCQVAALRH--TRISSVAGGWRHTMAADSSG 293



 Score = 81.3 bits (199), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 73/239 (30%), Positives = 108/239 (45%), Gaps = 7/239 (2%)

Query: 108 ETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV 166
           E   G   ++ G  H++ ++S   V S G    G LGHG +  +C++   I+  + A + 
Sbjct: 10  EEEPGVTAVSCGSSHSVAILSCGIVTSWGRGEDGQLGHG-QADECLAPKAISTLTDAGIE 68

Query: 167 QV-SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V   +E   A     GQV++ G       GH D N  +F PR +E   G P  +V  G 
Sbjct: 69  SVVCGAEYTIAVAPSRGQVYSWGWGDFGRLGHGDCN-DVFVPRPIEFFSGRPVHRVACGD 127

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
             T  +   G + T G N +GQLG G T D  +P+ +  L+    V  +A G  + LA T
Sbjct: 128 THTLVVAGEGELFTFGRNQNGQLGLGHTNDCLSPQLVVALQGE-RVRSVACGSEHSLAAT 186

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            +G V+S+G G    LG GE  D   P  +     +GI +V    G  H   +   G V
Sbjct: 187 ESGTVFSWGWGRYGNLGDGESQDRYLPTRVVGL--EGIRMVSAECGWRHSAVVSEDGRV 243



 Score = 80.9 bits (198), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 65/195 (33%), Positives = 91/195 (46%), Gaps = 5/195 (2%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  H+L  + S +VFS G    G LG G    + +  TR+       +V       H
Sbjct: 175 VACGSEHSLAATESGTVFSWGWGRYGNLGDGESQDRYLP-TRVVGLEGIRMVSAECGWRH 233

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           +A V + G+VFT G +     GH D T+R +  P  V AL+      V  G   T     
Sbjct: 234 SAVVSEDGRVFTFGWSKYGQLGHGDHTDRTV--PCQVAALRHTRISSVAGGWRHTMAADS 291

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G+++  G N  GQLG GD+ DRP+P  +        V  +  G  + +AVT  G VYS+
Sbjct: 292 SGNLYGWGWNKFGQLGLGDSSDRPSPVLVGGALAGQRVSLVTCGWRHTVAVTEGGRVYSW 351

Query: 294 GSGSNFCLGHGEQHD 308
           G G N  LGHG + D
Sbjct: 352 GRGVNGQLGHGAEQD 366


>gi|222619882|gb|EEE56014.1| hypothetical protein OsJ_04782 [Oryza sativa Japonica Group]
          Length = 1093

 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 95/185 (51%), Gaps = 7/185 (3%)

Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
           + F     V  +S    HAA V + G++++ G+ S    GH   +  + +P+L+++L  +
Sbjct: 305 LEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGH-GVDCDVAQPKLIDSLAHM 363

Query: 217 PCKQVTAGLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQ 273
             + V  G   T  +T+ G ++T G  T   G LGHG+ +    PK +  PLE +  V  
Sbjct: 364 NIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGPLEGI-HVSS 422

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I+ GP +   VT  G +++FG GS   LGHG++     PR +++   KG+  VR + G  
Sbjct: 423 ISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESL--KGLRTVRAACGVW 480

Query: 334 HVVAL 338
           H  A+
Sbjct: 481 HTAAV 485



 Score = 77.8 bits (190), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 68/229 (29%), Positives = 103/229 (44%), Gaps = 26/229 (11%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I+ G +HT L++++  +F+ G    GVLGHG   +  V    +        V+ +    H
Sbjct: 423 ISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVP-REVESLKGLRTVRAACGVWH 481

Query: 175 AAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            A V++            SG++FT GD      GH D +   F P  V AL      QV 
Sbjct: 482 TAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDS-RFVPTCVAALVEPNFCQVA 540

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAG 277
            G   T  LT  GHV+T GS  +GQLG+      P    + P+   G      V +I+ G
Sbjct: 541 CGHCLTVALTTSGHVYTMGSAVYGQLGN------PQADGLLPVRVEGKLHKNFVEEISCG 594

Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
             ++  +T    VY++G G+N  LGHG   D+  P  ++  + K +  V
Sbjct: 595 AYHVAVLTSRTEVYTWGKGANGRLGHGGTDDKNTPTLVEALKDKQVRSV 643



 Score = 55.1 bits (131), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 69/138 (50%), Gaps = 4/138 (2%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E    +  + ++ G      +T +G +++ G  + G+LGHG   D   PK I  L 
Sbjct: 302 PKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLA 361

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPRAIQTFRRKGIH 324
            + ++  +A G  +  AVT +G +Y++G G+  F  LGHG       P+ +     +GIH
Sbjct: 362 HM-NIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDG-PLEGIH 419

Query: 325 VVRVSAGDEHVVALDSSG 342
           V  +S G  H   + S+G
Sbjct: 420 VSSISCGPWHTALVTSAG 437


>gi|440904419|gb|ELR54939.1| Putative E3 ubiquitin-protein ligase HERC6, partial [Bos grunniens
           mutus]
          Length = 1019

 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 113/226 (50%), Gaps = 8/226 (3%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           ++ G+ H+L + +   VF+ G++  G LG G          +I   +   ++QV+    H
Sbjct: 80  VSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYH 139

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           +  + + GQVF+ G NS    G          P+ V +L+G+P  QV AG + +  L++ 
Sbjct: 140 SVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSLS 199

Query: 235 GHVHTCGSNTHGQL---GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           G     GSN  GQL   G+   + R  P SI  L+ +G VV I+ G  +   +T +G V+
Sbjct: 200 GTSFGWGSNNAGQLALSGNNAPVQRYKPVSIGALKTLG-VVSISCGYKHTAVLTQDGKVF 258

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           +FG  S   LGH    ++  P+ ++  R +G+ V ++  G +H +A
Sbjct: 259 TFGDNSYGQLGHDPTAEKRGPQLVE--RIEGL-VSQIDCGSDHTLA 301



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 75/240 (31%), Positives = 113/240 (47%), Gaps = 17/240 (7%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG--PETTQCVSFTRINFPSAAHVVQVSA 170
           +Q  +G +H+LL+ S+ +V SCG +  G LG    P   Q     RI      HV  VS 
Sbjct: 26  LQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQP---ERIPALETLHVALVSC 82

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            + H+  V   G+VF  G  S    G  +     F P+ ++ L G+   QV  G   +  
Sbjct: 83  GKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVA 142

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
           L+  G V + G+N+HGQLG G     + +P+ +  LE +  + Q+AAG  +  A++ +G 
Sbjct: 143 LSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGHHSFALSLSGT 201

Query: 290 VYSFGSGSN----FCL-GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             SFG GSN      L G+       +P +I   +  G  VV +S G +H   L   G V
Sbjct: 202 --SFGWGSNNAGQLALSGNNAPVQRYKPVSIGALKTLG--VVSISCGYKHTAVLTQDGKV 257



 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/187 (32%), Positives = 93/187 (49%), Gaps = 6/187 (3%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH++ +S +  VFS G++  G LG G E     S  R+       + QV+A  
Sbjct: 131 IQVACGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGG 190

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPI--FRPRLVEALKGVPCKQVTAGLNFTGF 230
           +H+  +  SG  F  G N++        N P+  ++P  + ALK +    ++ G   T  
Sbjct: 191 HHSFALSLSGTSFGWGSNNAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAV 250

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA-VTGNGV 289
           LT  G V T G N++GQLGH  T ++  P+ +  +E  G V QI  G  + LA +   G 
Sbjct: 251 LTQDGKVFTFGDNSYGQLGHDPTAEKRGPQLVERIE--GLVSQIDCGSDHTLAYIYTTGQ 308

Query: 290 VYSFGSG 296
           V SFG G
Sbjct: 309 VVSFGRG 315



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 54/180 (30%), Positives = 99/180 (55%), Gaps = 6/180 (3%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           ++Q ++ E+H+  +L  G V +CGDNS    G + T R   +P  + AL+ +    V+ G
Sbjct: 25  LLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGE-QPERIPALETLHVALVSCG 83

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYMLA 283
              +  +  +G V   G+ + GQLG G+  +    PK I  L  +  ++Q+A G  + +A
Sbjct: 84  KEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGI-KIIQVACGHYHSVA 142

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           ++ +G V+S+G+ S+  LG G++   +  P+ +++   +GI + +V+AG  H  AL  SG
Sbjct: 143 LSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGHHSFALSLSG 200


>gi|428177727|gb|EKX46605.1| hypothetical protein GUITHDRAFT_48927, partial [Guillardia theta
           CCMP2712]
          Length = 316

 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 72/239 (30%), Positives = 112/239 (46%), Gaps = 22/239 (9%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH------VV 166
           M ++ G  HT+++S +  VFS G    G LGHG       S   +  PS         V+
Sbjct: 84  MSVSCGGAHTVVVSEDGRVFSWGLGANGQLGHG-------SRDNLTTPSVVQAMRGRDVL 136

Query: 167 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
            V+    H   VL  G+++TCG N +  CG   T+  +  P+ VE+L+G   +  + G  
Sbjct: 137 AVTCGVGHTVIVLAGGELYTCGWNKNGQCGVGSTS-DLLSPQCVESLRGEGVQHASCGAG 195

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLAVT 285
            T  +T  G V T GS + GQLGHGD  D   P+ +  L  VG V+  +A G  Y +   
Sbjct: 196 HTAVVTGGGEVFTFGSGSCGQLGHGDCQDLSMPRRVGAL--VGIVMSMVACGEEYTVCAA 253

Query: 286 GNGVVYSFGSGSNFCLGHGE-QHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            +  V+ FG  +   LG     H  L +PR ++  + + + + + +     V+AL   G
Sbjct: 254 FDHRVFGFGLNNVGQLGASSTSHPYLSEPRQMEFLKEEEVELCKCN--QSEVIALTRRG 310



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 51/173 (29%), Positives = 77/173 (44%), Gaps = 2/173 (1%)

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
            V  V+    H+A V+ SG+V   G+N    CG   T      P  V +L GV C  V+ 
Sbjct: 30  QVRDVACGLVHSAMVMGSGEVLCWGENKYGQCG-TGTQEQTEHPTFVGSLFGVACMSVSC 88

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G   T  ++  G V + G   +GQLGHG   +  TP  +  +     V+ +  G  + + 
Sbjct: 89  GGAHTVVVSEDGRVFSWGLGANGQLGHGSRDNLTTPSVVQAMRGR-DVLAVTCGVGHTVI 147

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
           V   G +Y+ G   N   G G   D L P+ +++ R +G+      AG   VV
Sbjct: 148 VLAGGELYTCGWNKNGQCGVGSTSDLLSPQCVESLRGEGVQHASCGAGHTAVV 200



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 68/141 (48%), Gaps = 3/141 (2%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           PR+++   G   + V  GL  +  +   G V   G N +GQ G G       P  +  L 
Sbjct: 20  PRMLKKAMGRQVRDVACGLVHSAMVMGSGEVLCWGENKYGQCGTGTQEQTEHPTFVGSLF 79

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
            V + + ++ G ++ + V+ +G V+S+G G+N  LGHG + +   P  +Q  R  G  V+
Sbjct: 80  GV-ACMSVSCGGAHTVVVSEDGRVFSWGLGANGQLGHGSRDNLTTPSVVQAMR--GRDVL 136

Query: 327 RVSAGDEHVVALDSSGYVSLC 347
            V+ G  H V + + G +  C
Sbjct: 137 AVTCGVGHTVIVLAGGELYTC 157


>gi|380792513|gb|AFE68132.1| RCC1 and BTB domain-containing protein 2, partial [Macaca mulatta]
          Length = 369

 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 96/218 (44%), Gaps = 4/218 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  +F  G++ CG LG G +    +   R++  S   +  +S  S  H       G+VFT
Sbjct: 64  NDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFT 122

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN  +   ++   L      +V  G   +  LT  G V   G N  G
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 182

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T+++P P+ +    +   VV IA G    +AV   G VY +G   N  LG G  
Sbjct: 183 QVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSS 242

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            +  QP   +    +GI V RV+ G  H + L   G V
Sbjct: 243 GN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQV 278



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 92/187 (49%), Gaps = 12/187 (6%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G YH+L L S+  VF+ G +  G +G G    Q +            VV ++  +
Sbjct: 155 IEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ 214

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
                V+ +G+V+  G N +   G   + N+P   P  V AL+G+  ++V  G   T  L
Sbjct: 215 MCCMAVVDTGEVYVWGYNGNGQLGLGSSGNQPT--PCRVAALQGIRVQRVACGYAHTLVL 272

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDR--PTPKSIAPLEEVGSVVQIAAGPS--YMLAVTGN 287
           T  G V+  G+N++GQLG G+  ++  PTP ++    E   +++IAA  S     A T  
Sbjct: 273 TDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTM----EKDRIIEIAACHSTHTSAAKTQG 328

Query: 288 GVVYSFG 294
           G VY +G
Sbjct: 329 GHVYMWG 335



 Score = 40.0 bits (92), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 55/117 (47%), Gaps = 5/117 (4%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 287
           + T+   +   G+N  G LG GD      P+ +  L  +++ S +   +GP  +LA T  
Sbjct: 60  YTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIAS-LSYGSGPHIVLATT-E 117

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G V+++G  +   LG+G  +  L P  I T       V+ V+ G  H + L S G V
Sbjct: 118 GEVFTWGHNAYSQLGNGTTNHGLVPCQIST-NLSNKQVIEVACGSYHSLVLTSDGEV 173


>gi|449665602|ref|XP_002165309.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like, partial
           [Hydra magnipapillata]
          Length = 731

 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 68/232 (29%), Positives = 98/232 (42%), Gaps = 31/232 (13%)

Query: 106 IVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV 165
           +V TS    +I  G  HTL +S   V++ G +  G LG   E T+               
Sbjct: 37  LVNTSFCIEKIICGWNHTLFLSGGLVYASGLNYDGELGISNENTE--------------- 81

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
                        +  G VF+ G N     G          P+LV  L   P  Q+ AG 
Sbjct: 82  -------------VPDGHVFSWGSNEFGQVGINSKFHKYVSPQLVRDLSNCPIIQICAGG 128

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
           + +  LTI G +   G N+ GQLG GD  DR  P  I  +     V  I+ G  + + +T
Sbjct: 129 HHSLALTISGTIFAWGKNSFGQLGLGDQQDRLFPTKIQSMNG-KHVRYISCGEEHSVLLT 187

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             G VY+FG GS+  LGH E  D+  P+ +      G  V +++ G +H +A
Sbjct: 188 SAGRVYTFGCGSSGQLGHNEFEDQFIPKMVVDLM--GTPVTQIACGRKHTLA 237



 Score = 67.8 bits (164), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 48/131 (36%), Positives = 70/131 (53%), Gaps = 12/131 (9%)

Query: 223 AGLNFTGFLTI--------RGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQ 273
           +GLN+ G L I         GHV + GSN  GQ+G      +  +P+ +  L     ++Q
Sbjct: 65  SGLNYDGELGISNENTEVPDGHVFSWGSNEFGQVGINSKFHKYVSPQLVRDLSNC-PIIQ 123

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I AG  + LA+T +G ++++G  S   LG G+Q D L P  IQ+    G HV  +S G+E
Sbjct: 124 ICAGGHHSLALTISGTIFAWGKNSFGQLGLGDQQDRLFPTKIQSMN--GKHVRYISCGEE 181

Query: 334 HVVALDSSGYV 344
           H V L S+G V
Sbjct: 182 HSVLLTSAGRV 192



 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 73/140 (52%), Gaps = 4/140 (2%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QI  G +H+L ++ S ++F+ G +  G LG G +  +    T+I   +  HV  +S  E
Sbjct: 122 IQICAGGHHSLALTISGTIFAWGKNSFGQLGLGDQQDRLFP-TKIQSMNGKHVRYISCGE 180

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  +G+V+T G  SS   GH +     F P++V  L G P  Q+  G   T    
Sbjct: 181 EHSVLLTSAGRVYTFGCGSSGQLGHNEFEDQ-FIPKMVVDLMGTPVTQIACGRKHTLAHV 239

Query: 233 IRGH-VHTCGSNTHGQLGHG 251
           ++G+ +++ G N  GQLG G
Sbjct: 240 MKGNKLYSFGLNVKGQLGIG 259


>gi|408500686|ref|YP_006864605.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
 gi|408465510|gb|AFU71039.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
          Length = 1073

 Score = 82.0 bits (201), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 64/236 (27%), Positives = 117/236 (49%), Gaps = 8/236 (3%)

Query: 115 QITTGRYHTLLISNSSV-FSCGSSLCGVLGHGPETTQCVSFT-RINFPSAAHVVQVSASE 172
           Q + G+  +L + +  V +S G++  G LG  P  +       R++ P+  H +Q+SA +
Sbjct: 76  QFSAGKDFSLALDSLGVLYSWGNNSQGQLGRTPTDSDPADRPGRVDVPNGTHFLQISAGD 135

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRP-RLVEALKGVPC-KQVTAGLNFTGF 230
           ++A  +  +  +++ G+N     G   ++ P   P +++ ++       QV+ G N+   
Sbjct: 136 DYAVAIDINHHLYSWGNNEKGQAGQGISSSPSLPPNQVIPSVNATQSFVQVSTGPNYVLA 195

Query: 231 LTIRGHVHTCGSNTHGQLGH--GDTLDRPTPKSIAP--LEEVGSVVQIAAGPSYMLAVTG 286
           +   G V++ G N+ GQLG   G T+    P +  P  L +   + Q+ AG    LA+  
Sbjct: 196 VCSDGTVYSWGDNSSGQLGREVGGTMTHYGPGNPNPVSLPKGVKITQVTAGGKASLALAS 255

Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           +G VYS+G  S+  LG      E   RA +     G++  ++SAG  H++A+DS G
Sbjct: 256 DGSVYSWGDNSSGQLGRTPSASEPANRAYKMTTADGMNFSQISAGYRHILAVDSDG 311



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 55/186 (29%), Positives = 92/186 (49%), Gaps = 10/186 (5%)

Query: 167 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR-PIFRPRLVEALKGVPCKQVTAGL 225
           Q SA ++ +  +   G +++ G+NS    G   T+  P  RP  V+   G    Q++AG 
Sbjct: 76  QFSAGKDFSLALDSLGVLYSWGNNSQGQLGRTPTDSDPADRPGRVDVPNGTHFLQISAGD 135

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHG--DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           ++   + I  H+++ G+N  GQ G G   +   P  + I  +    S VQ++ GP+Y+LA
Sbjct: 136 DYAVAIDINHHLYSWGNNEKGQAGQGISSSPSLPPNQVIPSVNATQSFVQVSTGPNYVLA 195

Query: 284 VTGNGVVYSFGSGSNFCLGHG-----EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           V  +G VYS+G  S+  LG         +    P  +     KG+ + +V+AG +  +AL
Sbjct: 196 VCSDGTVYSWGDNSSGQLGREVGGTMTHYGPGNPNPVSL--PKGVKITQVTAGGKASLAL 253

Query: 339 DSSGYV 344
            S G V
Sbjct: 254 ASDGSV 259



 Score = 60.8 bits (146), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 58/205 (28%), Positives = 94/205 (45%), Gaps = 16/205 (7%)

Query: 145 GPETT-QCVSFTRINFPSAAHVVQVSASENHAAFVL---QSGQVFTCGDNSSFCCGHRDT 200
           GP+T  Q V  T    P     ++ S  ++ A F L     G +++ G N  +  GH  +
Sbjct: 584 GPQTGGQSVKLTP---PQGTRGIRFSWIQSGADFSLALGSDGNLYSWGINYDYQLGHTTS 640

Query: 201 NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD-TLDRPTP 259
           ++P+    +VE   GV   Q  AG  F   L   G+V+T G+NT+ QLG      +   P
Sbjct: 641 DKPV----VVETPAGVRYTQAAAGQKFALALGSDGYVYTWGNNTYDQLGRSTFGNNHNAP 696

Query: 260 KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
             + P   +    ++ AG  + LA+  +G +Y++G  S   LG G +        ++   
Sbjct: 697 DKVTPPAGI-HYTRVYAGDCFALALGSDGNLYAWGDNSAGALGQG-RIGATSRNPLRVVA 754

Query: 320 RKGIHVVRVSAG--DEHVVALDSSG 342
            +GI   +V  G   +HV+AL S G
Sbjct: 755 PEGITFTQVFTGPSSKHVLALGSDG 779



 Score = 60.8 bits (146), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 72/279 (25%), Positives = 113/279 (40%), Gaps = 48/279 (17%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRI--NFPSAAHVVQVSA 170
           +QI+ G  + + I  N  ++S G++  G  G G  ++  +   ++  +  +    VQVS 
Sbjct: 129 LQISAGDDYAVAIDINHHLYSWGNNEKGQAGQGISSSPSLPPNQVIPSVNATQSFVQVST 188

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHR----DTNRPIFRPRLVEALKGVPCKQVTAGLN 226
             N+   V   G V++ GDNSS   G       T+     P  V   KGV   QVTAG  
Sbjct: 189 GPNYVLAVCSDGTVYSWGDNSSGQLGREVGGTMTHYGPGNPNPVSLPKGVKITQVTAGGK 248

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVT 285
            +  L   G V++ G N+ GQLG   +   P  ++       G +  QI+AG  ++LAV 
Sbjct: 249 ASLALASDGSVYSWGDNSSGQLGRTPSASEPANRAYKMTTADGMNFSQISAGYRHILAVD 308

Query: 286 GNGVVYSFGSG-----SNFCLGHGEQ-------HD------------------------- 308
            +G  YS+G G     S   L  G +       HD                         
Sbjct: 309 SDGNTYSWGYGGTSQPSKVALPDGIRTRLISAGHDYSLVTASDGNIYSWGDNSSGQLGQD 368

Query: 309 ---ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              E   +  +     G+   +  AG  H++A+ S GY+
Sbjct: 369 TGGETTNQPGKAVTPDGVTYTQAIAGYRHILAMGSDGYL 407



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 50/195 (25%), Positives = 92/195 (47%), Gaps = 20/195 (10%)

Query: 115 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFT-RINFPSAAHVVQVSASE 172
           Q+T G   +L L S+ SV+S G +  G LG  P  ++  +   ++      +  Q+SA  
Sbjct: 242 QVTAGGKASLALASDGSVYSWGDNSSGQLGRTPSASEPANRAYKMTTADGMNFSQISAGY 301

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H   V   G  ++ G   +             +P  V    G+  + ++AG +++    
Sbjct: 302 RHILAVDSDGNTYSWGYGGTS------------QPSKVALPDGIRTRLISAGHDYSLVTA 349

Query: 233 IRGHVHTCGSNTHGQLGH---GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             G++++ G N+ GQLG    G+T ++P  K++ P  +  +  Q  AG  ++LA+  +G 
Sbjct: 350 SDGNIYSWGDNSSGQLGQDTGGETTNQPG-KAVTP--DGVTYTQAIAGYRHILAMGSDGY 406

Query: 290 VYSFGSGSNFCLGHG 304
           +Y +G  S+  LG G
Sbjct: 407 LYGWGDNSSSQLGTG 421



 Score = 52.0 bits (123), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 54/226 (23%), Positives = 94/226 (41%), Gaps = 14/226 (6%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV--SASENHAAFVLQSG 182
           L S+ ++++ G +  G LG G       +  R+  P      QV    S  H   +   G
Sbjct: 720 LGSDGNLYAWGDNSAGALGQGRIGATSRNPLRVVAPEGITFTQVFTGPSSKHVLALGSDG 779

Query: 183 QVFTCGDNSSFCCGHRDT-----NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
            +++ G + SF  G +         P+  P  V+A  G+   Q + GLNF+  L    ++
Sbjct: 780 NLYSWGYDDSFQLGRQRNALTALGDPL--PGKVQAPAGITFTQASTGLNFSLALGSDNNL 837

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           ++ G+    QLG+   +       I P     +  +  AG  + +A   +G +YS+G   
Sbjct: 838 YSWGNGLKSQLGNAQMISMYPSNVIMP--SGINFTRFVAGRYFAIAAGSDGNLYSWGYND 895

Query: 298 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
              LG       +  P  ++     GI +++  AGD H  A+ S G
Sbjct: 896 YGQLGRDISDKSDYMPTKLEA--PAGITLIQPQAGDNHSSAIGSDG 939



 Score = 46.6 bits (109), Expect = 0.018,   Method: Composition-based stats.
 Identities = 41/142 (28%), Positives = 64/142 (45%), Gaps = 16/142 (11%)

Query: 212 ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV 271
           A+  +   Q +AG +F+  L   G +++ G+N+ GQLG        TP    P +  G V
Sbjct: 68  AIGDIRFSQFSAGKDFSLALDSLGVLYSWGNNSQGQLGR-------TPTDSDPADRPGRV 120

Query: 272 --------VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRRKG 322
                   +QI+AG  Y +A+  N  +YS+G+      G G      L P  +       
Sbjct: 121 DVPNGTHFLQISAGDDYAVAIDINHHLYSWGNNEKGQAGQGISSSPSLPPNQVIPSVNAT 180

Query: 323 IHVVRVSAGDEHVVALDSSGYV 344
              V+VS G  +V+A+ S G V
Sbjct: 181 QSFVQVSTGPNYVLAVCSDGTV 202


>gi|357165462|ref|XP_003580391.1| PREDICTED: uncharacterized protein LOC100842512 [Brachypodium
           distachyon]
          Length = 1023

 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 56/177 (31%), Positives = 94/177 (53%), Gaps = 7/177 (3%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  ++  ENHAA V + G+VF+ G+ SS   GH+  N  +  P+LVEAL  V  K V  G
Sbjct: 264 VQSIACGENHAAIVTKLGEVFSWGNESSRTLGHQ-INDSVSCPKLVEALASVHVKAVAFG 322

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYM 281
              T  +T+ G +       H  G L +    ++ +P K   P++ + SV +IA G  + 
Sbjct: 323 SKHTCAVTVSGELLEWSEGAHRLGLLSNWYERNQWSPHKLFGPMDSI-SVSKIACGEWHT 381

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             +T +G ++++G G+   LGHG++    +P+ +++   KG+ V  V+ G  H  A+
Sbjct: 382 AIITSSGQLFTYGDGTFGVLGHGDKQGIARPKEVESL--KGLRVKSVACGPWHTAAV 436



 Score = 68.9 bits (167), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 62/223 (27%), Positives = 96/223 (43%), Gaps = 14/223 (6%)

Query: 132 FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNS 191
           +S G+   G+L +  E  Q           +  V +++  E H A +  SGQ+FT GD +
Sbjct: 338 WSEGAHRLGLLSNWYERNQWSPHKLFGPMDSISVSKIACGEWHTAIITSSGQLFTYGDGT 397

Query: 192 SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL----------TIRGHVHTCG 241
               GH D  + I RP+ VE+LKG+  K V  G   T  +             G + T G
Sbjct: 398 FGVLGHGD-KQGIARPKEVESLKGLRVKSVACGPWHTAAVVEVTSSFNCNAPSGKLFTWG 456

Query: 242 SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 301
               G+LGH D   +  P  +  L      +Q++ G +  + +T  GVV++ GS  +  L
Sbjct: 457 DADRGKLGHADKKIKLVPTCVDLLTSY-DFLQVSCGAALTVVLTSTGVVFTIGSSKHGQL 515

Query: 302 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G+     E       T + +   V  +S+G  HV  L   G V
Sbjct: 516 GNPHADGESICTVEGTLKNE--FVREISSGSSHVAVLTLKGQV 556



 Score = 47.4 bits (111), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 61/222 (27%), Positives = 98/222 (44%), Gaps = 27/222 (12%)

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVE-TSAGNMQITTGRYHTLLI 126
           H    G++R  ++E L        RV        H++ +VE TS+ N    +G+      
Sbjct: 403 HGDKQGIARPKEVESLKGL-----RVKSVACGPWHTAAVVEVTSSFNCNAPSGK------ 451

Query: 127 SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 186
               +F+ G +  G LGH  +  + V  T ++  ++   +QVS        +  +G VFT
Sbjct: 452 ----LFTWGDADRGKLGHADKKIKLVP-TCVDLLTSYDFLQVSCGAALTVVLTSTGVVFT 506

Query: 187 CGDNSSFCCG--HRDTNRPIFRPRLVE-ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            G +     G  H D          VE  LK    +++++G +    LT++G V T G  
Sbjct: 507 IGSSKHGQLGNPHADGESIC----TVEGTLKNEFVREISSGSSHVAVLTLKGQVFTWGKG 562

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAV 284
             GQLG GD  +R +P  +  L+  G  VQ IA G ++  AV
Sbjct: 563 ADGQLGLGDYDNRSSPTLVEALQ--GRHVQSIACGSNFSAAV 602



 Score = 38.5 bits (88), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 4/144 (2%)

Query: 203 PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           P   PRLV +   +  + +  G N    +T  G V + G+ +   LGH        PK +
Sbjct: 249 PKALPRLVASTTMLDVQSIACGENHAAIVTKLGEVFSWGNESSRTLGHQINDSVSCPKLV 308

Query: 263 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF--CLGHGEQHDELQPRAIQTFRR 320
             L  V  V  +A G  +  AVT +G +  +  G++    L +  + ++  P  +     
Sbjct: 309 EALASV-HVKAVAFGSKHTCAVTVSGELLEWSEGAHRLGLLSNWYERNQWSPHKL-FGPM 366

Query: 321 KGIHVVRVSAGDEHVVALDSSGYV 344
             I V +++ G+ H   + SSG +
Sbjct: 367 DSISVSKIACGEWHTAIITSSGQL 390


>gi|449673459|ref|XP_002164132.2| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Hydra
            magnipapillata]
          Length = 2284

 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 72/253 (28%), Positives = 114/253 (45%), Gaps = 14/253 (5%)

Query: 95   RFLQSVEHSSDIVETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVS 153
            R L+S++H       +   + + +G  H L L S+  VFS G    G LGHG   T    
Sbjct: 1519 RLLESIKH------INIKKISVHSGGRHCLALSSDGEVFSWGEGEDGKLGHGNRQTSSQP 1572

Query: 154  FTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
              RI F     +  + A  +H+A +  +G+++T G       GH D++  + +P+ VEAL
Sbjct: 1573 -KRIEFFCGKIITNICAGGSHSAAIGLNGELYTWGKGRYGRLGHGDSDDQL-KPKQVEAL 1630

Query: 214  KGVPCKQVTAGLNFTGFLTIRG--HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV 271
            +      V  G      L I    +V + G   +G+LG G +     P  I  L   G +
Sbjct: 1631 QFFFVLDVACGSGDAQTLCITNDDNVWSWGDGDYGKLGRGGSDGCKVPMIIEDLSGKG-I 1689

Query: 272  VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
            V++  G  + +A+T  GV+Y++G G  + LGHG +    +P  +     K   V  +S G
Sbjct: 1690 VKVECGSQFSMALTKYGVLYTWGKGDYYRLGHGTEEHVRRPMMVTALFNK--IVTSISCG 1747

Query: 332  DEHVVALDSSGYV 344
              H V     G V
Sbjct: 1748 SLHCVVCTDEGEV 1760



 Score = 72.0 bits (175), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 104/206 (50%), Gaps = 19/206 (9%)

Query: 156 RINFPSAAHVVQVSASENHAAFVLQS--GQVFTCGDNSS------FCCGHRDTNR----- 202
           +IN     H++ +  ++N    + +S   ++ T  +NS+      F  G  D ++     
Sbjct: 516 KINPDFQKHILSMFYTQNRKLSISESKDDELCTLWENSTNKQVDVFMWGLNDKDQLGGLK 575

Query: 203 --PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD-TLDRPTP 259
              +  P L + L  + CK +  G   T F+T +G +++CG ++ G+LG GD T +  +P
Sbjct: 576 GSKVKSPTLCDHLSSLQCKFIAGGSKSTFFITNKGKLYSCGESSFGKLGIGDITGNVTSP 635

Query: 260 KSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 318
           + +  L + + + V + +G ++++A+T +G+ +S+G G N  LGHG      +P  I+ F
Sbjct: 636 RLVTGLNQLIVTKVSVHSGGNHVMALTSDGLAFSWGDGENGQLGHGNLMSCSKPHLIEAF 695

Query: 319 RRKGIHVVRVSAGDEHVVALDSSGYV 344
              G  V  +S G  H  A+  + Y+
Sbjct: 696 V--GKIVTDISCGSAHSAAIVENKYL 719



 Score = 71.6 bits (174), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 98/228 (42%), Gaps = 7/228 (3%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L S+   FS G    G LGHG     C     I       V  +S    H+A +
Sbjct: 655 GNHVMALTSDGLAFSWGDGENGQLGHG-NLMSCSKPHLIEAFVGKIVTDISCGSAHSAAI 713

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
           +++  ++T G       GH D    I +P+ V    G    QV+ G     T  +T    
Sbjct: 714 VENKYLYTWGLGDFGRLGHGD-EETILQPKFVTHFLGYNVVQVSCGSRDAQTVCITDDDK 772

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           V + G    G+LG G +     P  +  L  +  + +I  G  + +A+T  G V+++G G
Sbjct: 773 VWSWGDGDFGKLGRGGSERCLIPVEVEQLRGL-QICKILCGAQFTVALTKTGTVWTWGKG 831

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             + LGHG      QP+ ++  R  G HV+ ++ G  H +A+   G V
Sbjct: 832 DFYRLGHGTDIHVRQPKLVEGLR--GKHVIDIAVGALHCLAVTQDGEV 877



 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 72/240 (30%), Positives = 107/240 (44%), Gaps = 16/240 (6%)

Query: 106 IVETSAGNM--QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA 162
           ++E   G +   I+ G  H+  ++ N  +++ G    G LGHG E T        +F   
Sbjct: 691 LIEAFVGKIVTDISCGSAHSAAIVENKYLYTWGLGDFGRLGHGDEETILQPKFVTHF-LG 749

Query: 163 AHVVQVSASENHAAFV--LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
            +VVQVS     A  V      +V++ GD      G   + R +  P  VE L+G+   +
Sbjct: 750 YNVVQVSCGSRDAQTVCITDDDKVWSWGDGDFGKLGRGGSERCLI-PVEVEQLRGLQICK 808

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           +  G  FT  LT  G V T G     +LGHG  +    PK +  L     V+ IA G  +
Sbjct: 809 ILCGAQFTVALTKTGTVWTWGKGDFYRLGHGTDIHVRQPKLVEGLRG-KHVIDIAVGALH 867

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH---VVRVSAGDEHVVA 337
            LAVT +G V+S+G   +  LG GE   +  P  I      G+H   +  V+ G  H +A
Sbjct: 868 CLAVTQDGEVFSWGDNDHGQLGTGETDVKKVPNLIT-----GLHNHRIKYVACGSSHSIA 922



 Score = 64.3 bits (155), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 80/160 (50%), Gaps = 8/160 (5%)

Query: 188  GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTH 245
            G+N     G+ +T   +  PRL+E++K +  K+++  +G      L+  G V + G    
Sbjct: 1502 GNNGQLGLGYSET---VTSPRLLESIKHINIKKISVHSGGRHCLALSSDGEVFSWGEGED 1558

Query: 246  GQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG 304
            G+LGHG+      PK I      G ++  I AG S+  A+  NG +Y++G G    LGHG
Sbjct: 1559 GKLGHGNRQTSSQPKRIEFF--CGKIITNICAGGSHSAAIGLNGELYTWGKGRYGRLGHG 1616

Query: 305  EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            +  D+L+P+ ++  +   +  V   +GD   + + +   V
Sbjct: 1617 DSDDQLKPKQVEALQFFFVLDVACGSGDAQTLCITNDDNV 1656



 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/181 (25%), Positives = 79/181 (43%), Gaps = 7/181 (3%)

Query: 105 DIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH 164
           ++V+ S G+    T      +  +  V+S G    G LG G  + +C+    +       
Sbjct: 751 NVVQVSCGSRDAQT----VCITDDDKVWSWGDGDFGKLGRGG-SERCLIPVEVEQLRGLQ 805

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           + ++         + ++G V+T G    +  GH  T+  + +P+LVE L+G     +  G
Sbjct: 806 ICKILCGAQFTVALTKTGTVWTWGKGDFYRLGH-GTDIHVRQPKLVEGLRGKHVIDIAVG 864

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
                 +T  G V + G N HGQLG G+T  +  P  I  L     +  +A G S+ +A 
Sbjct: 865 ALHCLAVTQDGEVFSWGDNDHGQLGTGETDVKKVPNLITGLHN-HRIKYVACGSSHSIAW 923

Query: 285 T 285
           T
Sbjct: 924 T 924



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 61/143 (42%), Gaps = 3/143 (2%)

Query: 118  TGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL I+N  +V+S G    G LG G  +  C     I   S   +V+V      + 
Sbjct: 1642 SGDAQTLCITNDDNVWSWGDGDYGKLGRGG-SDGCKVPMIIEDLSGKGIVKVECGSQFSM 1700

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + + G ++T G    +  GH  T   + RP +V AL       ++ G       T  G 
Sbjct: 1701 ALTKYGVLYTWGKGDYYRLGH-GTEEHVRRPMMVTALFNKIVTSISCGSLHCVVCTDEGE 1759

Query: 237  VHTCGSNTHGQLGHGDTLDRPTP 259
            V+  G N  GQLG G  + R TP
Sbjct: 1760 VYCWGDNDEGQLGDGTIIARQTP 1782


>gi|195490361|ref|XP_002093107.1| GE21143 [Drosophila yakuba]
 gi|194179208|gb|EDW92819.1| GE21143 [Drosophila yakuba]
          Length = 1057

 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 110/239 (46%), Gaps = 14/239 (5%)

Query: 115 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+  G  HTL L +N  V++CGS+    LGH   T + +    +       V+Q+S    
Sbjct: 44  QVACGHRHTLFLTANGKVYACGSNDHSQLGHELPTKRPLLIPELQ---DYVVIQISCGSR 100

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  + + GQV + GDN     GH      +  P++V  L      Q+  G N +  LT 
Sbjct: 101 HSLALSEWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTS 160

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRP---TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            G +++ GSN +GQLG     D      P  +  L  +  +  IA G ++   ++ +G V
Sbjct: 161 CGELYSWGSNIYGQLGVNSPKDLTHCNYPLRLTTLLGI-PLAAIACGGNHSFLISKSGAV 219

Query: 291 YSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSLC 347
             FG G N C  LG  ++ +   P  ++T R  G+    V+ GDE  V L + G V  C
Sbjct: 220 --FGWGRNNCGQLGLNDEANRAYPTQLKTLRTLGVRF--VACGDEFSVFLTNEGGVFTC 274



 Score = 80.9 bits (198), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 68/209 (32%), Positives = 106/209 (50%), Gaps = 12/209 (5%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLG-HGP-ETTQCVSFTRINFPSAAHVVQVSA 170
           +QI  G  H+L L S   ++S GS++ G LG + P + T C    R+       +  ++ 
Sbjct: 146 VQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPKDLTHCNYPLRLTTLLGIPLAAIAC 205

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR--PRLVEALKGVPCKQVTAGLNFT 228
             NH+  + +SG VF  G N+   CG    N    R  P  ++ L+ +  + V  G  F+
Sbjct: 206 GGNHSFLISKSGAVFGWGRNN---CGQLGLNDEANRAYPTQLKTLRTLGVRFVACGDEFS 262

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTG 286
            FLT  G V TCG+  +GQLGHG + +   P+ +  +E +GS + Q+A G  + LA V  
Sbjct: 263 VFLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMV--MELMGSTITQVACGNRHTLALVPS 320

Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAI 315
            G VY+FG GS+  LG       + P+ +
Sbjct: 321 RGRVYAFGLGSSGQLGTRSTKSLMLPQVV 349



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 70/230 (30%), Positives = 103/230 (44%), Gaps = 21/230 (9%)

Query: 125 LISNSSVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 183
           + S   ++  GS+  G LG G  E  Q ++ ++I +     V QV+    H  F+  +G+
Sbjct: 1   MASGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTANGK 60

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           V+ CG N     GH     P  RP L+  L+     Q++ G   +  L+  G V + G N
Sbjct: 61  VYACGSNDHSQLGHE---LPTKRPLLIPELQDYVVIQISCGSRHSLALSEWGQVLSWGDN 117

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEV------GSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
             GQLGH       T K I  L +V       +VVQIA G ++ LA+T  G +YS+GS  
Sbjct: 118 DCGQLGHA------TDKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNI 171

Query: 298 NFCLGHGEQHDELQ---PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              LG     D      P  + T    GI +  ++ G  H   +  SG V
Sbjct: 172 YGQLGVNSPKDLTHCNYPLRLTTLL--GIPLAAIACGGNHSFLISKSGAV 219


>gi|357166571|ref|XP_003580754.1| PREDICTED: protein RCC2-like [Brachypodium distachyon]
          Length = 547

 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 71/220 (32%), Positives = 111/220 (50%), Gaps = 30/220 (13%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L ++   ++ G +  G LGHG +T Q    T ++  S   +++ S  +NH   V   G+ 
Sbjct: 85  LGADGRCYTWGRNEKGQLGHG-DTVQRDLPTIVSELSKYKIIKASIGKNHTVVVTDDGKA 143

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC--KQVTA---GLNFTGFLT-IRGH-V 237
           F+ G N     G       I      E L  VPC   +VTA   G +FT +L+ + G  +
Sbjct: 144 FSFGHNKYGQLGTGSLRNEI------ETLP-VPCLVTEVTAAVCGGDFTVWLSSVEGSSI 196

Query: 238 HTCGSNTHGQLGHG-----DTLD---------RPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            T G   +GQLGHG     +T D         +P P++IA L E  ++V++A G ++ +A
Sbjct: 197 LTAGLPQYGQLGHGTDNEYNTKDSSVKLSYDPQPRPRAIAVLSEK-TIVKVACGTNHTVA 255

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 323
           V  +G VY++G G    LGH EQ DE QPR ++ F++  +
Sbjct: 256 VDSSGFVYTWGFGGYGRLGHREQKDEWQPRLVEVFQKNNV 295



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 56/112 (50%), Gaps = 7/112 (6%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGF----LTIRGHVHTCGSNTHGQLGHGDTLDRPTP 259
           +  P  +  L GV  + V +G   T F    L   G  +T G N  GQLGHGDT+ R  P
Sbjct: 56  LLSPSRLRPLVGVDIRSVASGC--TAFHCVALGADGRCYTWGRNEKGQLGHGDTVQRDLP 113

Query: 260 KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ 311
             ++ L +   +++ + G ++ + VT +G  +SFG      LG G   +E++
Sbjct: 114 TIVSELSKY-KIIKASIGKNHTVVVTDDGKAFSFGHNKYGQLGTGSLRNEIE 164



 Score = 38.1 bits (87), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 52/225 (23%), Positives = 85/225 (37%), Gaps = 30/225 (13%)

Query: 126 ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP-------------SAAHVVQVSASE 172
           +  SS+ + G    G LGHG +       + +                S   +V+V+   
Sbjct: 191 VEGSSILTAGLPQYGQLGHGTDNEYNTKDSSVKLSYDPQPRPRAIAVLSEKTIVKVACGT 250

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG----VPCKQVTAGLNFT 228
           NH   V  SG V+T G       GHR+  +  ++PRLVE  +      P   V+AG    
Sbjct: 251 NHTVAVDSSGFVYTWGFGGYGRLGHRE-QKDEWQPRLVEVFQKNNVLPPNAIVSAGSASC 309

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
                 G ++  G   +     GD    P P     ++  G  ++  A  +    V  + 
Sbjct: 310 ACTAGGGQLYMWGKMKN----TGDDWMYPKPL----MDLSGWNIRCMASGNMHHVVGADD 361

Query: 289 VVYSFGSGSNFCLGHGE--QHDELQPRAIQTFRRKGIHVVRVSAG 331
              S+G+     LG+G   Q     P+ + +   +G+HV  V  G
Sbjct: 362 SCISWGAAQYGELGYGPNGQKSSANPKKVDSL--EGMHVTSVGCG 404


>gi|340379689|ref|XP_003388359.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
           [Amphimedon queenslandica]
          Length = 1950

 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 115/247 (46%), Gaps = 20/247 (8%)

Query: 112 GNMQ-ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
            N+Q I  G+Y T ++  N S+  CG    G LG G    Q        FP    V  ++
Sbjct: 99  NNIQSIIAGQYCTFMVLHNGSMKCCGKGSYGRLGLGTSDVQTSIKDLDTFPEGTLVKSMA 158

Query: 170 AS---ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
            S   + H+  V ++G+V++ G+      GH + N     P+L+  L     + V+ G  
Sbjct: 159 TSRGSDGHSLAVDKNGKVYSWGEGEYGKLGHGN-NTTQKTPKLIAGLSNKVIRSVSCGNR 217

Query: 227 FTGFLTIRGHVHTCGSNTHGQL--------GHGDTLDRPTPKSIAPLEEVGSVVQ-IAAG 277
            +  +TI   + T G   HG+L        GHGDT  +  PK I  L+  G ++Q ++A 
Sbjct: 218 HSAAVTIDNELWTWGEGEHGRLGHGDTGRLGHGDTQKQIKPKVIEALK--GQLIQKVSAA 275

Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             + +A+T  G +YSFG GS   LG  +      P+ IQ+     + ++ V+ GD H +A
Sbjct: 276 NQFSIALTKTGKLYSFGKGSGTGLGTPDTSYS-TPQLIQSL--ADVIIIDVTTGDGHCLA 332

Query: 338 LDSSGYV 344
           L   G V
Sbjct: 333 LTQRGDV 339



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/225 (30%), Positives = 108/225 (48%), Gaps = 14/225 (6%)

Query: 122 HTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           H+L +  N  V+S G    G LGHG  TTQ      I   S   +  VS    H+A V  
Sbjct: 166 HSLAVDKNGKVYSWGEGEYGKLGHGNNTTQKTP-KLIAGLSNKVIRSVSCGNRHSAAVTI 224

Query: 181 SGQVFTCGDNSSFCCGHRDTNR-------PIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
             +++T G+      GH DT R          +P+++EALKG   ++V+A   F+  LT 
Sbjct: 225 DNELWTWGEGEHGRLGHGDTGRLGHGDTQKQIKPKVIEALKGQLIQKVSAANQFSIALTK 284

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G +++ G  +   LG  DT    TP+ I  L +V  ++ +  G  + LA+T  G VY +
Sbjct: 285 TGKLYSFGKGSGTGLGTPDT-SYSTPQLIQSLADV-IIIDVTTGDGHCLALTQRGDVYGW 342

Query: 294 GSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           G+ S    G G  ++ + +P  ++     G+ V ++SAG  H + 
Sbjct: 343 GTNSMGQCGQGHNNNSISKPGKVEGL--DGVQVQQISAGTSHSIV 385



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 72/148 (48%), Gaps = 5/148 (3%)

Query: 140 GVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRD 199
           G LGHG +T + +    I       + +VSA+   +  + ++G++++ G  S    G  D
Sbjct: 245 GRLGHG-DTQKQIKPKVIEALKGQLIQKVSAANQFSIALTKTGKLYSFGKGSGTGLGTPD 303

Query: 200 TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PT 258
           T+     P+L+++L  V    VT G      LT RG V+  G+N+ GQ G G   +    
Sbjct: 304 TSYS--TPQLIQSLADVIIIDVTTGDGHCLALTQRGDVYGWGTNSMGQCGQGHNNNSISK 361

Query: 259 PKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
           P  +  L+ V  V QI+AG S+ +  T 
Sbjct: 362 PGKVEGLDGV-QVQQISAGTSHSIVWTA 388



 Score = 47.0 bits (110), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 58/135 (42%), Gaps = 11/135 (8%)

Query: 213 LKGVPC------KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           LK  P       + + AG   T  +   G +  CG  ++G+LG G +  + + K +    
Sbjct: 90  LKATPVPHMNNIQSIIAGQYCTFMVLHNGSMKCCGKGSYGRLGLGTSDVQTSIKDLDTFP 149

Query: 267 E---VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 323
           E   V S+        + LAV  NG VYS+G G    LGHG    +  P+ I     K I
Sbjct: 150 EGTLVKSMATSRGSDGHSLAVDKNGKVYSWGEGEYGKLGHGNNTTQKTPKLIAGLSNKVI 209

Query: 324 HVVRVSAGDEHVVAL 338
               VS G+ H  A+
Sbjct: 210 R--SVSCGNRHSAAV 222


>gi|408681156|ref|YP_006880983.1| LPXTG-motif cell wall anchor domain [Streptomyces venezuelae ATCC
           10712]
 gi|328885485|emb|CCA58724.1| LPXTG-motif cell wall anchor domain [Streptomyces venezuelae ATCC
           10712]
          Length = 408

 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 62/190 (32%), Positives = 94/190 (49%), Gaps = 10/190 (5%)

Query: 105 DIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH 164
           D+ + SAG    ++     L  ++ +V S G +  G LG+G  T Q V  T    P    
Sbjct: 79  DVDQMSAGG--TSSADSFALARTDKTVKSWGHNSSGQLGNGGNTNQTVPTT---VPRLTD 133

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  V+A   HA  +  SGQV++ GDNS    G+  T      P  V+ +  V  KQ++AG
Sbjct: 134 IKDVAAGGKHALALDTSGQVYSWGDNSYGQLGNNRTGDSRTVPDRVQGMPKV--KQISAG 191

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
            +F+  L   G V+  G   HGQLG G+      P+ +  LE   ++V+I AG  + LA+
Sbjct: 192 CDFSLALLENGKVYAWGRGIHGQLGTGNRATSSVPRQVQGLE---NIVEIDAGCYHALAL 248

Query: 285 TGNGVVYSFG 294
           T +  V S+G
Sbjct: 249 TADDTVKSWG 258



 Score = 45.1 bits (105), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 58/113 (51%), Gaps = 11/113 (9%)

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG-----PSYMLAVTGNGVVY 291
           V + G+   GQLG+G   D  +P S+  L   G V Q++AG      S+ LA T +  V 
Sbjct: 47  VLSWGAGRTGQLGNGTLSDSLSPSSVTSLFR-GDVDQMSAGGTSSADSFALART-DKTVK 104

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           S+G  S+  LG+G   ++  P  +         +  V+AG +H +ALD+SG V
Sbjct: 105 SWGHNSSGQLGNGGNTNQTVPTTVPRL----TDIKDVAAGGKHALALDTSGQV 153


>gi|326522674|dbj|BAJ88383.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1092

 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 60/193 (31%), Positives = 97/193 (50%), Gaps = 9/193 (4%)

Query: 150 QCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHR-DTNRPIFRPR 208
            C+    + F     V  +S    HA  V + G+V++ G+ S    GH  D + P  +P+
Sbjct: 298 DCLVPKPLEFAGRLDVQNISCGGRHATLVTKQGEVYSWGEESGGRLGHGVDCDVP--QPK 355

Query: 209 LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APL 265
           L++AL  +  + V  G   T  +T+ G ++T G+ T   G  GHG+ +    PK +  PL
Sbjct: 356 LIDALAHMNIELVACGEYHTCAVTLSGDLYTWGNGTFNFGLSGHGNEVSHWMPKRLNGPL 415

Query: 266 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
           E +  V  I+ GP +   VT  G +++FG GS   LGHG++     PR +++   KG+  
Sbjct: 416 EGI-HVSSISCGPWHTAVVTSAGQLFTFGDGSFGVLGHGDRQSISVPREVESL--KGLRT 472

Query: 326 VRVSAGDEHVVAL 338
           VR + G  H  A+
Sbjct: 473 VRAACGVWHTAAV 485



 Score = 79.0 bits (193), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 105/230 (45%), Gaps = 28/230 (12%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           I+ G +HT +++++  +F+ G    GVLGHG    Q +S  R +        V+ +    
Sbjct: 423 ISCGPWHTAVVTSAGQLFTFGDGSFGVLGHG--DRQSISVPREVESLKGLRTVRAACGVW 480

Query: 174 HAAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
           H A V++            SG++FT GD      GH D    +  P  V +L      QV
Sbjct: 481 HTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKETRLV-PTCVASLVEPNFCQV 539

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAA 276
             G  FT  LT  GHV+T GS+ +GQLG+      P    + P    G      V +I+ 
Sbjct: 540 ACGHCFTVALTTSGHVYTMGSSVYGQLGN------PQADGMVPARVEGKLHKNFVEEISC 593

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
           G  ++  +T    VY++G G+N  LGHG+  D   P  ++  + K +  V
Sbjct: 594 GAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALKDKQVRSV 643



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 73/138 (52%), Gaps = 4/138 (2%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E    +  + ++ G      +T +G V++ G  + G+LGHG   D P PK I  L 
Sbjct: 302 PKPLEFAGRLDVQNISCGGRHATLVTKQGEVYSWGEESGGRLGHGVDCDVPQPKLIDALA 361

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-NFCL-GHGEQHDELQPRAIQTFRRKGIH 324
            + ++  +A G  +  AVT +G +Y++G+G+ NF L GHG +     P+ +     +GIH
Sbjct: 362 HM-NIELVACGEYHTCAVTLSGDLYTWGNGTFNFGLSGHGNEVSHWMPKRLNG-PLEGIH 419

Query: 325 VVRVSAGDEHVVALDSSG 342
           V  +S G  H   + S+G
Sbjct: 420 VSSISCGPWHTAVVTSAG 437



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 86/199 (43%), Gaps = 22/199 (11%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQC 151
           R +R    V H++ +VE       +  G   +   S+  +F+ G    G LGHG + T+ 
Sbjct: 471 RTVRAACGVWHTAAVVE-------VMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKETRL 523

Query: 152 V-----SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR 206
           V     S    NF       QV+        +  SG V+T G +     G+   +  +  
Sbjct: 524 VPTCVASLVEPNF------CQVACGHCFTVALTTSGHVYTMGSSVYGQLGNPQADGMV-- 575

Query: 207 PRLVEA-LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 265
           P  VE  L     ++++ G      LT R  V+T G   +G+LGHGDT DR +P  +  L
Sbjct: 576 PARVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNSPTLVEAL 635

Query: 266 EEVGSVVQIAAGPSYMLAV 284
           ++   V  +  G ++  A+
Sbjct: 636 KD-KQVRSVVCGINFTAAI 653



 Score = 44.3 bits (103), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 38/124 (30%), Positives = 58/124 (46%), Gaps = 3/124 (2%)

Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+  G   T+ ++ S  V++ GSS+ G LG+ P+    V            V ++S    
Sbjct: 538 QVACGHCFTVALTTSGHVYTMGSSVYGQLGN-PQADGMVPARVEGKLHKNFVEEISCGAY 596

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H A +    +V+T G  ++   GH DT+     P LVEALK    + V  G+NFT  + I
Sbjct: 597 HVAVLTSRTEVYTWGKGANGRLGHGDTDD-RNSPTLVEALKDKQVRSVVCGINFTAAICI 655

Query: 234 RGHV 237
              V
Sbjct: 656 HKWV 659


>gi|148908280|gb|ABR17254.1| unknown [Picea sitchensis]
          Length = 286

 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 105/210 (50%), Gaps = 7/210 (3%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I+ G  HT+ L++ + V S G    G LGHG    + +  T ++      +  V    +H
Sbjct: 19  ISAGASHTVALVAGNLVCSWGRGEDGQLGHGDAEDRPMP-TFVSALDGCEITSVICGADH 77

Query: 175 A-AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
             A+      V++ G       GH +++  +F P  ++ L+G+  KQ+  G +    +TI
Sbjct: 78  TTAYSDSRLVVYSWGWGDFGRLGHGNSS-DLFIPHAIKTLQGLQIKQIACGDSHCLAVTI 136

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
            G V + G N +GQLG GD +D   P+ +  P EE   VVQ++ G  + +A+TG   V+S
Sbjct: 137 NGEVQSWGRNQNGQLGVGDNIDHSFPQRVKLPAEE--EVVQVSCGWRHTVAITGKSNVFS 194

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           +G G++  LGHG+  D   P  I+     G
Sbjct: 195 WGRGTSGQLGHGDILDRNMPVLIEALSVDG 224


>gi|281207647|gb|EFA81827.1| putative protein serine/threonine kinase [Polysphondylium pallidum
           PN500]
          Length = 1626

 Score = 81.6 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 64/193 (33%), Positives = 98/193 (50%), Gaps = 10/193 (5%)

Query: 154 FTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
           FT++ +P    ++ V+A   H A + QSG++FT G+      GH D    I  P+ V AL
Sbjct: 122 FTKL-YPEE-RIILVNAGAAHIAMISQSGKLFTWGEGQYGRLGHGD-EESISTPKQVVAL 178

Query: 214 KGVPCKQVTAGLNFTGFL--TIRGHVHTCGSNTHGQLGHGDTLDRPT--PKSIAPLEEVG 269
             +P K V  G   T  L  T    ++T G+N  GQLG GD  D  T  P+S+A +    
Sbjct: 179 ANIPMKYVFCGGRSTIALSHTAGSGLYTWGNNEFGQLGRGDCGDDFTCLPESVA-VPGAK 237

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
            +V + AG S    +  +G ++++G G +  LGHG+  +  QP  + +    G  VV V+
Sbjct: 238 RLVALDAGASRAAVIDSSGALFTWGRGDHGRLGHGDTENRYQPTLVSSLY--GHVVVAVA 295

Query: 330 AGDEHVVALDSSG 342
            G  H +AL  +G
Sbjct: 296 LGGGHSLALTKAG 308



 Score = 77.4 bits (189), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 64/222 (28%), Positives = 103/222 (46%), Gaps = 7/222 (3%)

Query: 127 SNSSVFSCGSSLCGVLGHGP--ETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           + S +++ G++  G LG G   +   C+    +  P A  +V + A  + AA +  SG +
Sbjct: 200 AGSGLYTWGNNEFGQLGRGDCGDDFTCLP-ESVAVPGAKRLVALDAGASRAAVIDSSGAL 258

Query: 185 FTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           FT G       GH DT NR  ++P LV +L G     V  G   +  LT  G + + G  
Sbjct: 259 FTWGRGDHGRLGHGDTENR--YQPTLVSSLYGHVVVAVALGGGHSLALTKAGELFSWGRG 316

Query: 244 THGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
            +GQLGHG    +   PK +    ++  ++ I+AG  + +A   +G VY++G      LG
Sbjct: 317 ENGQLGHGSYQSQQLAPKQLQFFVDMPKIIGISAGGYHSVAQLDDGSVYAWGMSDYGILG 376

Query: 303 HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            G+  D       +    +GI    +S G +H VAL S   +
Sbjct: 377 TGDSDDGAINIPQRILMPRGIRFKTISCGFQHTVALTSDNTI 418



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 74/245 (30%), Positives = 108/245 (44%), Gaps = 30/245 (12%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETT-----QCVSFTRIN----FPSAAHV 165
           +  G  H  +IS S  +F+ G    G LGHG E +     Q V+   I     F      
Sbjct: 134 VNAGAAHIAMISQSGKLFTWGEGQYGRLGHGDEESISTPKQVVALANIPMKYVFCGGRST 193

Query: 166 VQVSASENHAAFVL---QSGQVF--TCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
           + +S +     +     + GQ+    CGD+  F C       P  + RLV          
Sbjct: 194 IALSHTAGSGLYTWGNNEFGQLGRGDCGDD--FTCLPESVAVPGAK-RLV---------A 241

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           + AG +    +   G + T G   HG+LGHGDT +R  P  ++ L     VV +A G  +
Sbjct: 242 LDAGASRAAVIDSSGALFTWGRGDHGRLGHGDTENRYQPTLVSSLYG-HVVVAVALGGGH 300

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
            LA+T  G ++S+G G N  LGHG  Q  +L P+ +Q F      ++ +SAG  H VA  
Sbjct: 301 SLALTKAGELFSWGRGENGQLGHGSYQSQQLAPKQLQFFVDMP-KIIGISAGGYHSVAQL 359

Query: 340 SSGYV 344
             G V
Sbjct: 360 DDGSV 364


>gi|356501809|ref|XP_003519716.1| PREDICTED: uncharacterized protein LOC100778984 [Glycine max]
          Length = 1122

 Score = 81.6 bits (200), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 110/236 (46%), Gaps = 30/236 (12%)

Query: 114 MQITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G +H+ L  SN  +F+ G    GVLGHG   +  V++ + +   S    ++V+  
Sbjct: 413 VSVACGTWHSALATSNGKLFTIGDGRFGVLGHGDRDS--VAYPKEVQLLSGHKAIKVACG 470

Query: 172 ENHAAFVLQ----------SGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQ 220
             H+A +++          + ++FT GD   +  GH   N+  +  P  V A+      Q
Sbjct: 471 VWHSAAIIEVMGPSGSNTSAKRLFTWGDGDQYRLGH--VNKETYLEPTCVAAVAEYNFHQ 528

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-----QIA 275
           V  G   T  LT  GHV T G   +GQLG+      P      P+   G +V     +I+
Sbjct: 529 VACGYTMTVALTTSGHVFTMGGTAYGQLGN------PNSDGKVPILVRGKLVGEFVEEIS 582

Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
            G +++  +T    +Y++G G+N  LGHG+  D+  P  ++  + +  H+  +S G
Sbjct: 583 CGANHVAVLTSRSELYTWGRGANGRLGHGDTDDQKSPTMVEALKDR--HIKNISCG 636



 Score = 72.4 bits (176), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 56/177 (31%), Positives = 85/177 (48%), Gaps = 7/177 (3%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q+   + H A V + G+VFT G++S    GH    +   RP LVE+L       V  G
Sbjct: 305 VHQIGPGDRHIALVTRQGEVFTWGEDSGGRLGH-GFEKDFGRPHLVESLAITNVTFVACG 363

Query: 225 LNFTGFLTIRGHVHTCGSNTHG--QLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
              +  ++  G + T G  THG   LGHG  +    PK ++ PLE +  VV +A G  + 
Sbjct: 364 EYHSCAVSSSGDLFTWGDGTHGAGLLGHGTDVSYWIPKRVSGPLEGL-QVVSVACGTWHS 422

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
              T NG +++ G G    LGHG++     P+ +Q     G   ++V+ G  H  A+
Sbjct: 423 ALATSNGKLFTIGDGRFGVLGHGDRDSVAYPKEVQLL--SGHKAIKVACGVWHSAAI 477



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/163 (25%), Positives = 77/163 (47%), Gaps = 4/163 (2%)

Query: 182 GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 241
           G+V+  G++S            +  P+ +E+   +   Q+  G      +T +G V T G
Sbjct: 269 GEVWVDGNSSDGLGSLASCKTDVLTPKPLESDVVLDVHQIGPGDRHIALVTRQGEVFTWG 328

Query: 242 SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC- 300
            ++ G+LGHG   D   P  +  L  + +V  +A G  +  AV+ +G ++++G G++   
Sbjct: 329 EDSGGRLGHGFEKDFGRPHLVESL-AITNVTFVACGEYHSCAVSSSGDLFTWGDGTHGAG 387

Query: 301 -LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            LGHG       P+ + +   +G+ VV V+ G  H     S+G
Sbjct: 388 LLGHGTDVSYWIPKRV-SGPLEGLQVVSVACGTWHSALATSNG 429



 Score = 38.9 bits (89), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 3/115 (2%)

Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+  G   T+ ++ S  VF+ G +  G LG+ P +   V            V ++S   N
Sbjct: 528 QVACGYTMTVALTTSGHVFTMGGTAYGQLGN-PNSDGKVPILVRGKLVGEFVEEISCGAN 586

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
           H A +    +++T G  ++   GH DT+     P +VEALK    K ++ G  FT
Sbjct: 587 HVAVLTSRSELYTWGRGANGRLGHGDTDDQK-SPTMVEALKDRHIKNISCGSTFT 640


>gi|195441394|ref|XP_002068495.1| GK20388 [Drosophila willistoni]
 gi|194164580|gb|EDW79481.1| GK20388 [Drosophila willistoni]
          Length = 1054

 Score = 81.6 bits (200), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 104/207 (50%), Gaps = 8/207 (3%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGP--ETTQCVSFTRINFPSAAHVVQVSA 170
           +QI  G  H+L L S   ++S GS++ G LG  P  E + C    R+       +  ++ 
Sbjct: 142 VQIACGNNHSLALTSCGELYSWGSNIYGQLGVKPPQELSHCNYPLRLTTLLGIPLATIAC 201

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
             NH+  + +S  VF  G N+    G  D +   + P  ++ L+ +  + V  G  F+ F
Sbjct: 202 GGNHSFLISKSSAVFGFGRNNCGQLGLNDESNRAY-PTQLKTLRTLGVRFVACGDEFSVF 260

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGNG 288
           LT  G V TCG+ T+GQLGHG   +   P+ +  +E +GS + Q+A G  + LA V   G
Sbjct: 261 LTNEGGVFTCGAGTYGQLGHGSNTNEMLPRMV--MELMGSTITQVACGNRHTLALVPSRG 318

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAI 315
            VY FG GS+  LG+   +    P+ +
Sbjct: 319 RVYGFGLGSSGQLGNRSTNSVTLPQEV 345



 Score = 74.7 bits (182), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 67/242 (27%), Positives = 107/242 (44%), Gaps = 20/242 (8%)

Query: 115 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI  G  HTL L +N  V++CG++    LGH   T + +    +       VV ++    
Sbjct: 40  QIACGHRHTLFLTANGKVYACGNNDQAQLGHNLPTKRPLLIPEL---QNYVVVAIACGSR 96

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  + + GQV + GDN     G       I  P+++ +L      Q+  G N +  LT 
Sbjct: 97  HSMALTEWGQVLSWGDNDCGQLGQSTDQSIIELPKIIRSLVSKHVVQIACGNNHSLALTS 156

Query: 234 RGHVHTCGSNTHGQLG--------HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G +++ GSN +GQLG        H +   R T     PL        IA G ++   ++
Sbjct: 157 CGELYSWGSNIYGQLGVKPPQELSHCNYPLRLTTLLGIPL------ATIACGGNHSFLIS 210

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVS 345
            +  V+ FG  +   LG  ++ +   P  ++T R  G+    V+ GDE  V L + G V 
Sbjct: 211 KSSAVFGFGRNNCGQLGLNDESNRAYPTQLKTLRTLGVRF--VACGDEFSVFLTNEGGVF 268

Query: 346 LC 347
            C
Sbjct: 269 TC 270



 Score = 70.9 bits (172), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 55/174 (31%), Positives = 83/174 (47%), Gaps = 16/174 (9%)

Query: 130 SVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
            +F  G++  G LG G  E  Q +  ++I +   A + Q++    H  F+  +G+V+ CG
Sbjct: 2   DLFCWGNASHGQLGMGGIEDEQILIPSQIPWKPDAPLRQIACGHRHTLFLTANGKVYACG 61

Query: 189 DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 248
           +N     GH   N P  RP L+  L+      +  G   +  LT  G V + G N  GQL
Sbjct: 62  NNDQAQLGH---NLPTKRPLLIPELQNYVVVAIACGSRHSMALTEWGQVLSWGDNDCGQL 118

Query: 249 GHGDTLDRPTPKSIAPLEEV------GSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           G        T +SI  L ++        VVQIA G ++ LA+T  G +YS+GS 
Sbjct: 119 GQS------TDQSIIELPKIIRSLVSKHVVQIACGNNHSLALTSCGELYSWGSN 166



 Score = 67.4 bits (163), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 46/143 (32%), Positives = 68/143 (47%), Gaps = 6/143 (4%)

Query: 201 NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 260
           +  I  P  +      P +Q+  G   T FLT  G V+ CG+N   QLGH     RP   
Sbjct: 21  DEQILIPSQIPWKPDAPLRQIACGHRHTLFLTANGKVYACGNNDQAQLGHNLPTKRPL-- 78

Query: 261 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFR 319
            + P  +   VV IA G  + +A+T  G V S+G      LG       ++ P+ I++  
Sbjct: 79  -LIPELQNYVVVAIACGSRHSMALTEWGQVLSWGDNDCGQLGQSTDQSIIELPKIIRSLV 137

Query: 320 RKGIHVVRVSAGDEHVVALDSSG 342
            K  HVV+++ G+ H +AL S G
Sbjct: 138 SK--HVVQIACGNNHSLALTSCG 158


>gi|339010099|ref|ZP_08642670.1| copper amine oxidase domain protein [Brevibacillus laterosporus LMG
           15441]
 gi|338773369|gb|EGP32901.1| copper amine oxidase domain protein [Brevibacillus laterosporus LMG
           15441]
          Length = 392

 Score = 81.6 bits (200), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 101/216 (46%), Gaps = 11/216 (5%)

Query: 129 SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
           S ++  GS   GVLG      +  S   ++    + V+ V    +H   + + G V+T G
Sbjct: 51  SVIYGTGSDANGVLGSSSVKGKTTSPVPVD--DLSDVLMVDTGTSHTVALQKDGTVWTWG 108

Query: 189 DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 248
            ++    G+         P  V+ L  V  KQV AG NFT  L   G V   G N  GQL
Sbjct: 109 WSAYGELGNEKAKSTEKTPHHVKWLSDV--KQVRAGENFTLALKEDGTVWAFGKNRSGQL 166

Query: 249 GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD 308
           G G T  R  P  ++ L +   +V I AG  + LA++ +G V+++G+ S   LG+G +  
Sbjct: 167 GDGTTETRVKPVQVSGLTD---IVAIDAGEEFSLALSEDGTVWAWGNNSVGQLGNGTREK 223

Query: 309 ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            LQP  +         V+ +S G++   A+ S+G V
Sbjct: 224 ALQPVQVSEL----TDVIAISTGEKQGYAVTSNGDV 255



 Score = 72.0 bits (175), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 61/219 (27%), Positives = 97/219 (44%), Gaps = 16/219 (7%)

Query: 104 SDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA 163
           +DIV   AG        +   L  + +V++ G++  G LG+G   T+  +   +      
Sbjct: 184 TDIVAIDAGE------EFSLALSEDGTVWAWGNNSVGQLGNG---TREKALQPVQVSELT 234

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
            V+ +S  E     V  +G V+  G N         TN+    P L++ +  V    V +
Sbjct: 235 DVIAISTGEKQGYAVTSNGDVYGWGYNQGKLG--DGTNKSRNSPVLIDGIYDVIA--VDS 290

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSI--APLEEVGSVVQIAAGPSY 280
           G   T  L   G V   G+NTHGQLG+G  ++   TP  +     E +  +V I AG  +
Sbjct: 291 GKQHTLALKEDGTVWAWGTNTHGQLGYGTPVNYSMTPNQVFLESTEPLNQIVAIDAGGFH 350

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
             A+  +G V+S+G  SN  LG G    ++ P  I+T  
Sbjct: 351 SHAIKKDGTVWSWGFNSNGELGLGHSKKQMYPAKIETIN 389


>gi|359473366|ref|XP_002273996.2| PREDICTED: uncharacterized protein LOC100250008 [Vitis vinifera]
          Length = 1047

 Score = 81.6 bits (200), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 65/219 (29%), Positives = 101/219 (46%), Gaps = 14/219 (6%)

Query: 131 VFSCGSSLC-GVLGHGPETTQCVSFTRIN--FPSAAH------VVQVSASENHAAFVLQS 181
           VF  G  +  G++G G       S T+I+   P A        V  ++    HA  V + 
Sbjct: 251 VFMWGEGIGDGIMGAGVHRVGSSSSTKIDALLPKALESTVVLDVHSIACGGKHAVLVTKK 310

Query: 182 GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 241
           G+VF+ G+      GH      +  P+L++AL G+  + V  G   +  +T+ G ++T G
Sbjct: 311 GEVFSWGEECGSRLGH-GVEVDVSHPKLIDALCGMNIELVACGEYHSCAVTLSGDLYTWG 369

Query: 242 SNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             TH  G LGHG       PK ++   E   V  +A GP +   VT  G +++FG G+  
Sbjct: 370 DGTHNSGLLGHGSEASHWIPKKVSGPMEGMHVSYVACGPWHTAVVTSAGQLFTFGDGTFG 429

Query: 300 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            LGHG+      PR ++  R  G   +RV+ G  H  A+
Sbjct: 430 ALGHGDHSSMSIPREVEALR--GQRTMRVACGVWHTAAV 466



 Score = 68.2 bits (165), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 98/227 (43%), Gaps = 19/227 (8%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G +HT +++++  +F+ G    G LGHG  ++  +    +        ++V+    H
Sbjct: 404 VACGPWHTAVVTSAGQLFTFGDGTFGALGHGDHSSMSIP-REVEALRGQRTMRVACGVWH 462

Query: 175 AAFVLQ---------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 219
            A V++               SG++FT GD      GH D   P   P+ V AL      
Sbjct: 463 TAAVVELMIASSSFESSGSSSSGKLFTWGDGDKGRLGHGD-KEPRLVPQSVTALINESFC 521

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
           QV  G N +  LT  G V+T GS  +GQLG     D   P  +        V ++A G  
Sbjct: 522 QVACGHNLSVALTTSGRVYTMGSAVYGQLG-SPVADGKIPTLVEGKIANSFVEEVACGSY 580

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
           ++  +T    VY++G G+N  LGHG+      P  +   + K +  V
Sbjct: 581 HVAVLTSKTEVYTWGKGTNGQLGHGDNDHRNTPTLVDFLKDKQVKNV 627



 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 57/219 (26%), Positives = 97/219 (44%), Gaps = 14/219 (6%)

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLIS 127
           H  ++ MS   ++E L       +R +R    V H++ +VE     M  ++    +   S
Sbjct: 433 HGDHSSMSIPREVEALRG-----QRTMRVACGVWHTAAVVEL----MIASSSFESSGSSS 483

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +  +F+ G    G LGHG +  + V  +     + +   QV+   N +  +  SG+V+T 
Sbjct: 484 SGKLFTWGDGDKGRLGHGDKEPRLVPQSVTALINES-FCQVACGHNLSVALTTSGRVYTM 542

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
           G       G    +  I  P LVE  +     ++V  G      LT +  V+T G  T+G
Sbjct: 543 GSAVYGQLGSPVADGKI--PTLVEGKIANSFVEEVACGSYHVAVLTSKTEVYTWGKGTNG 600

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
           QLGHGD   R TP  +  L++   V  +  G ++  A++
Sbjct: 601 QLGHGDNDHRNTPTLVDFLKD-KQVKNVVCGLNFTAAIS 638



 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 69/140 (49%), Gaps = 4/140 (2%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E+   +    +  G      +T +G V + G     +LGHG  +D   PK I  L 
Sbjct: 283 PKALESTVVLDVHSIACGGKHAVLVTKKGEVFSWGEECGSRLGHGVEVDVSHPKLIDALC 342

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIH 324
            + ++  +A G  +  AVT +G +Y++G G++    LGHG +     P+ + +   +G+H
Sbjct: 343 GM-NIELVACGEYHSCAVTLSGDLYTWGDGTHNSGLLGHGSEASHWIPKKV-SGPMEGMH 400

Query: 325 VVRVSAGDEHVVALDSSGYV 344
           V  V+ G  H   + S+G +
Sbjct: 401 VSYVACGPWHTAVVTSAGQL 420


>gi|242074110|ref|XP_002446991.1| hypothetical protein SORBIDRAFT_06g026493 [Sorghum bicolor]
 gi|241938174|gb|EES11319.1| hypothetical protein SORBIDRAFT_06g026493 [Sorghum bicolor]
          Length = 1024

 Score = 81.6 bits (200), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 63/216 (29%), Positives = 111/216 (51%), Gaps = 9/216 (4%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   VF  G +   +L +  +T++ +    ++  +   V  ++  E HAA + + G+V
Sbjct: 225 LDSLKDVFFWGDAFGSILDYD-DTSKSLPML-VDSTNMLDVQSIACGETHAAIITKQGEV 282

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
           ++ G+ SS   G++  N  + RP+LVE++  +  K V  G      +T+ G +   G   
Sbjct: 283 YSWGNESSGGIGNQ-VNIKVSRPKLVESVASLHVKAVAYGSKHACAVTVSGELFEWGEGP 341

Query: 245 H-GQLG-HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
           H GQL  + + L  P  K  +PL+ + SVV+IA GP +   +T +G +Y++G G+   LG
Sbjct: 342 HMGQLDCYANNLWFPH-KLFSPLDGI-SVVKIACGPWHTAIITSSGQLYTYGDGTFGVLG 399

Query: 303 HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           HG+     +P+ ++    KG  V  V+ G  H  A+
Sbjct: 400 HGDTQGTTRPKEVEYL--KGSRVKCVACGPWHTAAI 433



 Score = 77.8 bits (190), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 66/236 (27%), Positives = 111/236 (47%), Gaps = 16/236 (6%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           ++I  G +HT +I++S  +++ G    GVLGHG +T        + +   + V  V+   
Sbjct: 369 VKIACGPWHTAIITSSGQLYTYGDGTFGVLGHG-DTQGTTRPKEVEYLKGSRVKCVACGP 427

Query: 173 NHAAFVLQ----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            H A +++            ++FT GD      GH D    +  P  V++L      QV+
Sbjct: 428 WHTAAIVEVLSDFKSNSPRSKLFTWGDADRGKLGHADKKMKLI-PTCVDSLTDYDFIQVS 486

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
            G+  T  L+I G V T GS+ HGQLG+    D  T  ++  L +   V  I++G S++ 
Sbjct: 487 CGMALTVVLSITGVVFTIGSSMHGQLGNPHA-DGRTVCAVEGLLKTEFVRHISSGSSHVA 545

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            +T NG V+++G G    LG G+  +   P  +     +G  V  +S G  +  A+
Sbjct: 546 VLTTNGKVFTWGKGKEGQLGLGDYLNRSTPTLVDAL--EGRQVESISCGYNYTAAV 599


>gi|195336543|ref|XP_002034895.1| GM14399 [Drosophila sechellia]
 gi|194127988|gb|EDW50031.1| GM14399 [Drosophila sechellia]
          Length = 1058

 Score = 81.6 bits (200), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 69/208 (33%), Positives = 107/208 (51%), Gaps = 10/208 (4%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLG-HGP-ETTQCVSFTRINFPSAAHVVQVSA 170
           +QI  G  H+L L S   ++S GS++ G LG + P + T C    R+       +  ++ 
Sbjct: 146 VQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIAC 205

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
             NH+  + +SG VF  G N+    G  D TNR    P  ++ L+ +  + V  G  F+ 
Sbjct: 206 GGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRAY--PTQLKTLRTLGVRFVACGDEFSV 263

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGN 287
           FLT  G V TCG+  +GQLGHG + +   P+ +  +E +GS + Q+A G  + LA V   
Sbjct: 264 FLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMV--MELMGSTITQVACGNRHTLALVPSR 321

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAI 315
           G VY+FG GS+  LG       + P+ +
Sbjct: 322 GKVYAFGLGSSGQLGTRSTKSLMLPQVV 349



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 70/230 (30%), Positives = 105/230 (45%), Gaps = 21/230 (9%)

Query: 125 LISNSSVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 183
           + S   ++  GS+  G LG G  E  Q ++  +I +     V QV+    H  F+  +G+
Sbjct: 1   MASGKELYCWGSTSHGQLGLGGIEDEQILTPRQIPWTPDTAVQQVACGHRHTLFLTATGK 60

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           V+ CG N     GH   + P  RP+L+  L+     Q++ G   +  L+  G V + G N
Sbjct: 61  VYACGSNDYSQLGH---DLPTKRPQLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDN 117

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEV------GSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
             GQLGH       T K I  L +V       +VVQIA G ++ LA+T  G +YS+GS  
Sbjct: 118 DCGQLGHA------TEKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNI 171

Query: 298 NFCLGHGEQHDELQ---PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              LG    +D      P  + T    GI +  ++ G  H   +  SG V
Sbjct: 172 YGQLGVNSPNDLTHCNYPLRLTTLL--GIPLAAIACGGNHSFLISKSGAV 219



 Score = 77.8 bits (190), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 68/239 (28%), Positives = 108/239 (45%), Gaps = 14/239 (5%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+  G  HTL ++ +  V++CGS+    LGH   T +      +       ++Q+S    
Sbjct: 44  QVACGHRHTLFLTATGKVYACGSNDYSQLGHDLPTKRPQLIPELQ---DYVIIQISCGSR 100

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  +   GQV + GDN     GH      +  P++V  L      Q+  G N +  LT 
Sbjct: 101 HSLALSDWGQVLSWGDNDCGQLGHATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTS 160

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRP---TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            G +++ GSN +GQLG     D      P  +  L  +  +  IA G ++   ++ +G V
Sbjct: 161 CGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGI-PLAAIACGGNHSFLISKSGAV 219

Query: 291 YSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSLC 347
             FG G N C  LG  ++ +   P  ++T R  G+    V+ GDE  V L + G V  C
Sbjct: 220 --FGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRF--VACGDEFSVFLTNEGGVFTC 274


>gi|332819950|ref|XP_003310459.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Pan troglodytes]
          Length = 957

 Score = 81.6 bits (200), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 61/190 (32%), Positives = 93/190 (48%), Gaps = 7/190 (3%)

Query: 130 SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 189
            +F+ G +L G LG G +     +   +   +   + Q+SA E H+  +  SG +++ G 
Sbjct: 91  ELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGK 150

Query: 190 NS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           N       GH ++      P L+E L     + V  G + +  LT  G + T G+  HGQ
Sbjct: 151 NEFGQLGLGHTESKD---YPSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQ 207

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGEQ 306
           LGH  T +   P  +A L E   V QIA G  + LA V+  G V+SFGSG +  LG+G  
Sbjct: 208 LGHNSTQNELRPCLVAELVEY-RVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGT 266

Query: 307 HDELQPRAIQ 316
            D+L P  ++
Sbjct: 267 RDQLMPLPVK 276



 Score = 71.2 bits (173), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 48/157 (30%), Positives = 80/157 (50%), Gaps = 3/157 (1%)

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           SG++F  G N     G          P++VE L GVP  Q++AG   +  L++ G++++ 
Sbjct: 89  SGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSW 148

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
           G N  GQLG G T  +  P  I  L+    V  +A G S+   +T +G++++FG+G +  
Sbjct: 149 GKNEFGQLGLGHTESKDYPSLIEGLDN-QKVEFVACGGSHSALLTQDGLLFTFGAGKHGQ 207

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           LGH    +EL+P  +         V +++ G  H +A
Sbjct: 208 LGHNSTQNELRPCLVAELVE--YRVTQIACGRWHTLA 242



 Score = 45.8 bits (107), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 42/136 (30%), Positives = 61/136 (44%), Gaps = 16/136 (11%)

Query: 215 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP--LEEVGSV- 271
           GV   Q+ AG    G  T  G +   G N HGQLG G    R  P +  P  +E +  V 
Sbjct: 72  GVQVHQLLAGSG--GARTPSGELFAWGQNLHGQLGVG----RKFPSTTTPQIVEHLAGVP 125

Query: 272 -VQIAAGPSYMLAVTGNGVVYSFGSGS--NFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 328
             QI+AG ++ +A++ +G +YS+G        LGH E  D   P  I+    + +    V
Sbjct: 126 LAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKD--YPSLIEGLDNQKVEF--V 181

Query: 329 SAGDEHVVALDSSGYV 344
           + G  H   L   G +
Sbjct: 182 ACGGSHSALLTQDGLL 197


>gi|414878660|tpg|DAA55791.1| TPA: putative regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 964

 Score = 81.6 bits (200), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 108/241 (44%), Gaps = 21/241 (8%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G YHT  ++ S     +  G+   G+LGHG + +  V    +N P    HV  +S  
Sbjct: 240 VACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVP-KHVNGPLEGIHVSSISCG 298

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H A V  +GQ+FT GD S    GH D    I  PR VE+LKG+   +   G+  T  +
Sbjct: 299 PWHTALVTSAGQLFTFGDGSFGVLGHGD-RESISVPREVESLKGLRTVRAACGVWHTAAV 357

Query: 232 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
                          G + T G    G+LGHGD   +  P  +A L E  +  Q+A G  
Sbjct: 358 VEVMSVNSNSSNCSSGKIFTWGDGDKGRLGHGDKEPKLVPTCVAALVEP-NFCQVACGHC 416

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
             +A+T +G VY+ GS     LG+  Q D + P  ++    K   V  +S G  HV  L 
Sbjct: 417 LTVALTTSGHVYTMGSAVYGQLGNA-QADGMLPVRVEGKLYKNF-VEEISCGAYHVAVLT 474

Query: 340 S 340
           S
Sbjct: 475 S 475



 Score = 79.0 bits (193), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 68/225 (30%), Positives = 103/225 (45%), Gaps = 18/225 (8%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           I+ G +HT L++++  +F+ G    GVLGHG    + +S  R +        V+ +    
Sbjct: 295 ISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDR--ESISVPREVESLKGLRTVRAACGVW 352

Query: 174 HAAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
           H A V++            SG++FT GD      GH D   P   P  V AL      QV
Sbjct: 353 HTAAVVEVMSVNSNSSNCSSGKIFTWGDGDKGRLGHGD-KEPKLVPTCVAALVEPNFCQV 411

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
             G   T  LT  GHV+T GS  +GQLG+    D   P  +        V +I+ G  ++
Sbjct: 412 ACGHCLTVALTTSGHVYTMGSAVYGQLGNAQA-DGMLPVRVEGKLYKNFVEEISCGAYHV 470

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
             +T    VY++G G+N  LGHG+  D+  P  ++  + K +  V
Sbjct: 471 AVLTSRTEVYTWGKGANGRLGHGDTEDKNTPTLVEALKDKQVRNV 515



 Score = 68.2 bits (165), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 49/153 (32%), Positives = 77/153 (50%), Gaps = 6/153 (3%)

Query: 189 DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH--G 246
           D  +  CG R       + +L++AL  +  + V  G   T  +T+ G ++T G  T   G
Sbjct: 208 DVQNISCGGRHAALVTKQAKLIDALSHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFG 267

Query: 247 QLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
            LGHG+ +    PK +  PLE +  V  I+ GP +   VT  G +++FG GS   LGHG+
Sbjct: 268 LLGHGNDVSHWVPKHVNGPLEGI-HVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGD 326

Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           +     PR +++   KG+  VR + G  H  A+
Sbjct: 327 RESISVPREVESL--KGLRTVRAACGVWHTAAV 357



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 52/202 (25%), Positives = 89/202 (44%), Gaps = 17/202 (8%)

Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNS-SFCCGHRDTNRPIFRPRLVEA-LK 214
           I+  S  ++  V+  E H   V  SG ++T GD +  F       +   + P+ V   L+
Sbjct: 229 IDALSHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKHVNGPLE 288

Query: 215 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 274
           G+    ++ G   T  +T  G + T G  + G LGHGD      P+ +  L+ +   V+ 
Sbjct: 289 GIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRESISVPREVESLKGL-RTVRA 347

Query: 275 AAGPSYMLAVT------------GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           A G  +  AV              +G ++++G G    LGHG++  +L P  +       
Sbjct: 348 ACGVWHTAAVVEVMSVNSNSSNCSSGKIFTWGDGDKGRLGHGDKEPKLVPTCVAALVEP- 406

Query: 323 IHVVRVSAGDEHVVALDSSGYV 344
            +  +V+ G    VAL +SG+V
Sbjct: 407 -NFCQVACGHCLTVALTTSGHV 427



 Score = 40.0 bits (92), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 58/128 (45%), Gaps = 11/128 (8%)

Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGH----GPETTQCVSFTRINFPSAAHVVQVS 169
           Q+  G   T+ ++ S  V++ GS++ G LG+    G    +       NF     V ++S
Sbjct: 410 QVACGHCLTVALTTSGHVYTMGSAVYGQLGNAQADGMLPVRVEGKLYKNF-----VEEIS 464

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
               H A +    +V+T G  ++   GH DT      P LVEALK    + V  G+NFT 
Sbjct: 465 CGAYHVAVLTSRTEVYTWGKGANGRLGHGDTEDK-NTPTLVEALKDKQVRNVVCGINFTA 523

Query: 230 FLTIRGHV 237
            + I   V
Sbjct: 524 AICIHKWV 531


>gi|351711665|gb|EHB14584.1| Putative E3 ubiquitin-protein ligase HERC3 [Heterocephalus glaber]
          Length = 1051

 Score = 81.6 bits (200), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 64/237 (27%), Positives = 108/237 (45%), Gaps = 21/237 (8%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 99

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 239 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFSSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIH----------------VVRVSAGDEHVVAL 338
              LG  ++    Q    +T   +G++                VV +S GDEH   L
Sbjct: 219 AGQLGLSDEKGIKQGALDKTENIRGLYSNRESPCHVKLLRTQKVVYISCGDEHTAVL 275



 Score = 74.3 bits (181), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 57/189 (30%), Positives = 101/189 (53%), Gaps = 10/189 (5%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N    +P  + AL    
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN----KPEQIGALADQH 85

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ +G + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IIHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFSSQASPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 336 VALDSSGYV 344
            AL  SG V
Sbjct: 203 FALSLSGAV 211



 Score = 71.6 bits (174), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 83/165 (50%), Gaps = 25/165 (15%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           T GQLGH    ++P        E++G+     ++ +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIIHVACGESHSLALSDQGQLFSWGAGSD 113

Query: 299 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADG 156


>gi|329928889|ref|ZP_08282703.1| regulator of chromosome condensation (RCC1) repeat protein
           [Paenibacillus sp. HGF5]
 gi|328937260|gb|EGG33685.1| regulator of chromosome condensation (RCC1) repeat protein
           [Paenibacillus sp. HGF5]
          Length = 719

 Score = 81.6 bits (200), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 71/235 (30%), Positives = 111/235 (47%), Gaps = 21/235 (8%)

Query: 115 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           ++  G YHT  L+S+  V+S G    G LG G   T+       N     HV+ + +   
Sbjct: 37  KLVAGYYHTASLVSSGEVYSWGYGDRGQLGDGTWNTRTTPVMAKNL---NHVIDIHSGVR 93

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF-LT 232
            +  + Q G V+T G N +   G   T   +  P  V  L G+  K ++ GL + G  L+
Sbjct: 94  SSMALRQDGTVWTWGANENGQLG-IGTITNVNAPAQVPGLSGI--KAISGGLAYHGMALS 150

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G V T G N +G+LG+G T  + +P  +A L +   V  IAAG  Y LA+  +G V++
Sbjct: 151 ENGTVWTWGKNDNGELGNGTTTQQNSPVLVAGLSD---VTAIAAGGYYSLALKSDGTVWA 207

Query: 293 FGSGSNFCLGHG---EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           +G   +  LG G   E+H  +Q   +         V+ ++AG  H +A+   G V
Sbjct: 208 WGVNGSGELGDGTTTERHVPVQVAGL-------TDVMAIAAGGSHSLAIRQDGTV 255



 Score = 60.8 bits (146), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 97/228 (42%), Gaps = 20/228 (8%)

Query: 121 YHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           YH + +S N +V++ G +  G LG+G  T Q    + +     + V  ++A   ++  + 
Sbjct: 144 YHGMALSENGTVWTWGKNDNGELGNGTTTQQN---SPVLVAGLSDVTAIAAGGYYSLALK 200

Query: 180 QSGQVFTCGDNSSFCCGHRDTNR---PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             G V+  G N S   G   T     P+    L + +       + AG + +  +   G 
Sbjct: 201 SDGTVWAWGVNGSGELGDGTTTERHVPVQVAGLTDVMA------IAAGGSHSLAIRQDGT 254

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           V   G+NT+G LG G    R  P  +  L+ +   V +A G  + LAV   G V+S+G  
Sbjct: 255 VWAWGNNTYGTLGDGTRTHRTRPVQVRNLQHI---VAVAGGGYHSLAVDQAGNVWSWGDN 311

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           S   LG       L P  +        HV  +SAG  H VA+   G V
Sbjct: 312 SQQQLGLSSNASSLIPVPVTGIE----HVREISAGGFHSVAMKKDGTV 355



 Score = 52.0 bits (123), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 56/217 (25%), Positives = 94/217 (43%), Gaps = 18/217 (8%)

Query: 104 SDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA 163
           SD+   +AG      G Y   L S+ +V++ G +  G LG G  T + V    +      
Sbjct: 184 SDVTAIAAG------GYYSLALKSDGTVWAWGVNGSGELGDGTTTERHVP---VQVAGLT 234

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
            V+ ++A  +H+  + Q G V+  G+N+    G   T     RP  V  L+ +    V  
Sbjct: 235 DVMAIAAGGSHSLAIRQDGTVWAWGNNTYGTLGD-GTRTHRTRPVQVRNLQHIVA--VAG 291

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G   +  +   G+V + G N+  QLG         P  +  +E V    +I+AG  + +A
Sbjct: 292 GGYHSLAVDQAGNVWSWGDNSQQQLGLSSNASSLIPVPVTGIEHV---REISAGGFHSVA 348

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR 320
           +  +G V+ +G  S   LG G  ++    R I T  +
Sbjct: 349 MKKDGTVWGWGYNSGGQLGDGTYNNT---RGIPTLTK 382


>gi|326432295|gb|EGD77865.1| ITCH protein [Salpingoeca sp. ATCC 50818]
          Length = 1207

 Score = 81.6 bits (200), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 72/232 (31%), Positives = 107/232 (46%), Gaps = 9/232 (3%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           + TG YH+L I+ S +V++ G +    LG   +  +    T +   +A   V  +   + 
Sbjct: 40  VATGYYHSLAITRSGTVYTTGKNDRRQLGRSGDEHKWARVTPLETITA---VAGAVGLDF 96

Query: 175 AAFVLQSGQVFTCG--DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           +  V  +G+V+T G  +      G          PR V+ L       V  G      LT
Sbjct: 97  SVVVDSTGKVYTWGGGERGQLGLGREAMETGSRVPRPVKGLGNAFVISVACGTRHCLALT 156

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G V + G    GQLG G  + R +P+ IA L   G VV +AAG +Y LAVTG   VY+
Sbjct: 157 RDGRVFSWGEGADGQLGDGQFVSRHSPEVIADLRGKG-VVSVAAGSTYSLAVTGADQVYA 215

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           FGS S   LG G+     +P  ++     G  V  V+AGD H +A   +G++
Sbjct: 216 FGSNSKGQLGVGDTTARFRPTLVRFL--DGKQVCHVTAGDFHTLARTRTGHL 265



 Score = 68.6 bits (166), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 75/248 (30%), Positives = 104/248 (41%), Gaps = 34/248 (13%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLG-------HGPETTQCVSFTRINFPSAAHV 165
           + +  G  H L L  +  VFS G    G LG       H PE    +            V
Sbjct: 143 ISVACGTRHCLALTRDGRVFSWGEGADGQLGDGQFVSRHSPEVIADLR--------GKGV 194

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
           V V+A   ++  V  + QV+  G NS    G  DT    FRP LV  L G     VTAG 
Sbjct: 195 VSVAAGSTYSLAVTGADQVYAFGSNSKGQLGVGDTT-ARFRPTLVRFLDGKQVCHVTAGD 253

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAGPSYMLA- 283
             T   T  GH++  GSN  GQLG G   D    P  I  + E+G V++++AG  + +A 
Sbjct: 254 FHTLARTRTGHLYAWGSNQWGQLGLGSEADSVAAPTEITHILEIGRVLEVSAGRRHTVAL 313

Query: 284 ---VTGNG----VVYSFGSGSNFCLGHGEQHDELQPRAIQTF------RRKGIHVVRVSA 330
              VT  G    V  +FG+ +   LG    H     +  Q F      R   +H +++ A
Sbjct: 314 IRTVTETGAQATVAVAFGANNTGQLGLDPDHP--ASKRTQLFHPVRLKRISSMHPIKLIA 371

Query: 331 GDEHVVAL 338
           G  H + +
Sbjct: 372 GGNHTIMI 379


>gi|198435791|ref|XP_002121699.1| PREDICTED: similar to NEK (NEver in mitosis Kinase) Like family
           member (nekl-1) [Ciona intestinalis]
          Length = 1265

 Score = 81.6 bits (200), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 51/151 (33%), Positives = 79/151 (52%), Gaps = 4/151 (2%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            PS   + QV+   NH   V     V++ G+N+    GH     P+ +P ++EALKG P 
Sbjct: 577 LPSKVKIRQVAVGTNHVVVVTTERVVYSWGENAYGQLGHGHL-EPVAKPHVIEALKGKPI 635

Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
              + G NF+ F+T  G + TCG  + G LG G+      P  + PL  V  V  +A G 
Sbjct: 636 TTTSCGSNFSVFVTDNGILLTCGDGSQGCLGQGNLSSTTRPSMVEPLLSV-DVSTVACGD 694

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE 309
           ++++A++  G +Y++G GS   LG G  HD+
Sbjct: 695 AHVVALSSEGEIYAWGCGSQGRLGTG--HDD 723



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 44/136 (32%), Positives = 66/136 (48%), Gaps = 7/136 (5%)

Query: 213 LKGVPCK----QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 268
           ++G+P K    QV  G N    +T    V++ G N +GQLGHG       P  I  L+  
Sbjct: 574 IEGLPSKVKIRQVAVGTNHVVVVTTERVVYSWGENAYGQLGHGHLEPVAKPHVIEALKG- 632

Query: 269 GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 328
             +   + G ++ + VT NG++ + G GS  CLG G      +P  ++      + V  V
Sbjct: 633 KPITTTSCGSNFSVFVTDNGILLTCGDGSQGCLGQGNLSSTTRPSMVEPLL--SVDVSTV 690

Query: 329 SAGDEHVVALDSSGYV 344
           + GD HVVAL S G +
Sbjct: 691 ACGDAHVVALSSEGEI 706



 Score = 47.8 bits (112), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 48/186 (25%), Positives = 76/186 (40%), Gaps = 21/186 (11%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   +++ G    G LG G +   C+   R+    A  +  V    +   F+   G +
Sbjct: 700 LSSEGEIYAWGCGSQGRLGTGHDD-HCIEPHRVAINQA--IRDVRCGHDGTMFITDVGTL 756

Query: 185 FTCGDNSSFCCGHRDTNRPIFR---------------PRLVEALKGVPCKQVTAGLNFTG 229
             CG+N     G  +    I                 P +V+++KGV    V  G + T 
Sbjct: 757 LACGNNQYNKLGLNERTGFIMMFNNRLKKTEVECRKTPTVVKSIKGV--VDVAMGRHHTT 814

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
            LT    V   GSN  GQ+G GD   R +P  +  +++   +V +A G +Y    T N +
Sbjct: 815 VLTESNQVLMLGSNKEGQMGTGDNKLRTSPYLVKCIKDYDVMV-VACGNTYTAVGTSNNI 873

Query: 290 VYSFGS 295
           V  +GS
Sbjct: 874 VLYWGS 879



 Score = 46.2 bits (108), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 57/228 (25%), Positives = 86/228 (37%), Gaps = 23/228 (10%)

Query: 132 FSCGSSLCGVLGHG---PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
           +S G +  G LGHG   P     V    I       +   S   N + FV  +G + TCG
Sbjct: 603 YSWGENAYGQLGHGHLEPVAKPHV----IEALKGKPITTTSCGSNFSVFVTDNGILLTCG 658

Query: 189 DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 248
           D S  C G  + +    RP +VE L  V    V  G      L+  G ++  G  + G+L
Sbjct: 659 DGSQGCLGQGNLSS-TTRPSMVEPLLSVDVSTVACGDAHVVALSSEGEIYAWGCGSQGRL 717

Query: 249 GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE--- 305
           G G       P  +A  +   ++  +  G    + +T  G + + G+     LG  E   
Sbjct: 718 GTGHDDHCIEPHRVAINQ---AIRDVRCGHDGTMFITDVGTLLACGNNQYNKLGLNERTG 774

Query: 306 ---------QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
                    +  E++ R   T  +    VV V+ G  H   L  S  V
Sbjct: 775 FIMMFNNRLKKTEVECRKTPTVVKSIKGVVDVAMGRHHTTVLTESNQV 822


>gi|149043903|gb|EDL97354.1| rCG61079, isoform CRA_c [Rattus norvegicus]
          Length = 928

 Score = 81.6 bits (200), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 68/206 (33%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S +S VF  G +  G LG G E  +  S   I        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 107/226 (47%), Gaps = 7/226 (3%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G + +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G    + T P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIECQKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGV 263



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 64/213 (30%), Positives = 96/213 (45%), Gaps = 9/213 (4%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G E   +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           P+ I++    GI  ++V+AG  H   L  SG +
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAI 211


>gi|58865718|ref|NP_001012074.1| probable E3 ubiquitin-protein ligase HERC4 [Rattus norvegicus]
 gi|81883244|sp|Q5PQN1.1|HERC4_RAT RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           4
 gi|56269464|gb|AAH87104.1| Hect domain and RLD 4 [Rattus norvegicus]
          Length = 1057

 Score = 81.3 bits (199), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 68/206 (33%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S +S VF  G +  G LG G E  +  S   I        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 107/226 (47%), Gaps = 7/226 (3%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G + +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G    + T P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIECQKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGV 263



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 64/213 (30%), Positives = 96/213 (45%), Gaps = 9/213 (4%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G E   +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           P+ I++    GI  ++V+AG  H   L  SG +
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAI 211


>gi|359479203|ref|XP_002279847.2| PREDICTED: uncharacterized protein LOC100248282 isoform 1 [Vitis
           vinifera]
          Length = 1107

 Score = 81.3 bits (199), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 70/225 (31%), Positives = 104/225 (46%), Gaps = 18/225 (8%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA-SEN 173
           I+ G +HT ++++S  +F+ G    GVLGHG   T+ VS  R       H   +SA    
Sbjct: 424 ISCGPWHTAVVTSSGQLFTFGDGTFGVLGHG--DTKSVSKPREVESLKGHRTVISACGVW 481

Query: 174 HAAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
           H A V++            SG++FT GD      GH D    +  P  V AL      +V
Sbjct: 482 HTAAVVEIMVGNPSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV-PTCVAALVDPNFCRV 540

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
             G + T  LT  GHV+T GS  +GQLG+    D   P  +        V +IA G  ++
Sbjct: 541 ACGHSLTVALTTSGHVYTMGSPVYGQLGNPQA-DGKLPTRVEGKLAKSFVEEIACGAYHV 599

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
             +T    VY++G G+N  LGHG+  D   P  ++  + K +  +
Sbjct: 600 AVLTSRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALKDKQVKSI 644



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/177 (30%), Positives = 91/177 (51%), Gaps = 7/177 (3%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  ++    HAA V + G++F+ G+ S    GH   +  +  P+L+++L     + V  G
Sbjct: 314 VQNIACGGRHAALVTKQGEIFSWGEESGGRLGH-GVDSDVLHPKLIDSLSNTNIELVACG 372

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYM 281
              T  +T+ G ++T G  T+  G LGHG+ +    PK +  PLE +  V  I+ GP + 
Sbjct: 373 EYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGI-HVSSISCGPWHT 431

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             VT +G +++FG G+   LGHG+     +PR +++   KG   V  + G  H  A+
Sbjct: 432 AVVTSSGQLFTFGDGTFGVLGHGDTKSVSKPREVESL--KGHRTVISACGVWHTAAV 486



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 79/258 (30%), Positives = 116/258 (44%), Gaps = 22/258 (8%)

Query: 100 VEHSSDIVETSAGNMQITT-GRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFT 155
           V H   I   S  N+++   G YHT  ++ S     +  G+   G+LGHG E +  V   
Sbjct: 352 VLHPKLIDSLSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVP-K 410

Query: 156 RINFP-SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK 214
           R+N P    HV  +S    H A V  SGQ+FT GD +    GH DT + + +PR VE+LK
Sbjct: 411 RVNGPLEGIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGVLGHGDT-KSVSKPREVESLK 469

Query: 215 GVPCKQVTAGLNFTGFLT------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           G        G+  T  +               G + T G    G+LGHGD   +  P  +
Sbjct: 470 GHRTVISACGVWHTAAVVEIMVGNPSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCV 529

Query: 263 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           A L +  +  ++A G S  +A+T +G VY+ GS     LG+ +   +L  R      +  
Sbjct: 530 AALVDP-NFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPTRVEGKLAKS- 587

Query: 323 IHVVRVSAGDEHVVALDS 340
             V  ++ G  HV  L S
Sbjct: 588 -FVEEIACGAYHVAVLTS 604



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 68/241 (28%), Positives = 109/241 (45%), Gaps = 20/241 (8%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           GR+  L+     +FS G    G LGHG + +  +    I+  S  ++  V+  E H   V
Sbjct: 321 GRHAALVTKQGEIFSWGEESGGRLGHGVD-SDVLHPKLIDSLSNTNIELVACGEYHTCAV 379

Query: 179 LQSGQVFTCGDNS-SF-CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             SG ++T GD + +F   GH +        R+   L+G+    ++ G   T  +T  G 
Sbjct: 380 TLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSSGQ 439

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLE------------EVGSVVQIAAG-PSYMLA 283
           + T G  T G LGHGDT     P+ +  L+               +VV+I  G PS   +
Sbjct: 440 LFTFGDGTFGVLGHGDTKSVSKPREVESLKGHRTVISACGVWHTAAVVEIMVGNPSS--S 497

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
              +G ++++G G    LGHG++  +L P  +        +  RV+ G    VAL +SG+
Sbjct: 498 NCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAAL--VDPNFCRVACGHSLTVALTTSGH 555

Query: 344 V 344
           V
Sbjct: 556 V 556



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 70/140 (50%), Gaps = 4/140 (2%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E+   +  + +  G      +T +G + + G  + G+LGHG   D   PK I  L 
Sbjct: 303 PKALESAVVLDVQNIACGGRHAALVTKQGEIFSWGEESGGRLGHGVDSDVLHPKLIDSLS 362

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPRAIQTFRRKGIH 324
              ++  +A G  +  AVT +G +Y++G G+ NF  LGHG +     P+ +     +GIH
Sbjct: 363 NT-NIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNG-PLEGIH 420

Query: 325 VVRVSAGDEHVVALDSSGYV 344
           V  +S G  H   + SSG +
Sbjct: 421 VSSISCGPWHTAVVTSSGQL 440



 Score = 40.4 bits (93), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 55/114 (48%), Gaps = 4/114 (3%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVLQSGQ 183
           L ++  V++ GS + G LG+ P+    +  TR+    A   V+ ++    H A +    +
Sbjct: 550 LTTSGHVYTMGSPVYGQLGN-PQADGKLP-TRVEGKLAKSFVEEIACGAYHVAVLTSRTE 607

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
           V+T G  ++   GH DT+     P LVEALK    K +  G NFT  + +   V
Sbjct: 608 VYTWGKGANGRLGHGDTD-DRNSPTLVEALKDKQVKSIACGTNFTATICLHKWV 660


>gi|297838741|ref|XP_002887252.1| hypothetical protein ARALYDRAFT_476103 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297333093|gb|EFH63511.1| hypothetical protein ARALYDRAFT_476103 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1027

 Score = 81.3 bits (199), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 67/229 (29%), Positives = 105/229 (45%), Gaps = 25/229 (10%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVS---FTRI--NFPSA 162
           +  G +HT ++++S  +F+ G    G LGHG       P   + +S    T++       
Sbjct: 399 VACGPWHTAVVASSGQLFTFGDGSFGALGHGDRRSTSVPREVKILSGLIVTKVACGVWHT 458

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           A +V+V+   + A      GQVFT GD      GH D +  +  P  V +L      QV 
Sbjct: 459 AALVEVTNEASEAEVGSSRGQVFTWGDGEKGQLGHGDNDAQLL-PECVISLSNENICQVA 517

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-----IAAG 277
            G + T  LT  GHV+T GS  +GQLG+      PT K   P    G +V+     IA G
Sbjct: 518 CGHSLTVSLTSTGHVYTMGSTAYGQLGN------PTAKGNFPARVEGDIVEASVEEIACG 571

Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
             ++  +T    +Y++G G N  LGHG   ++ +P  +   + K +  +
Sbjct: 572 SYHVAVLTSKSEIYTWGKGLNGQLGHGTIENKREPAVVGFLKEKQVKAI 620



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 58/228 (25%), Positives = 100/228 (43%), Gaps = 11/228 (4%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN----- 173
           G YH    +   VF  G S+C  +  G   +   +   +  P A     V  ++N     
Sbjct: 237 GSYHEDFDALGDVFVWGESICDGVLTGTGNSLNSTTEDVLLPKALESTIVLDAQNIACGK 296

Query: 174 -HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            HA  V + G++F+ G+              + +P+ + +++G+  K +  G   T  +T
Sbjct: 297 CHAVLVTKQGEIFSWGEGKGGK-LGHGLETDVQQPKFISSVRGLGFKSLACGDFHTCAIT 355

Query: 233 IRGHVHTCGSNTHG--QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
             G +++ G  TH    LGHG+      PK +    +   V  +A GP +   V  +G +
Sbjct: 356 QSGDLYSWGDGTHNVDLLGHGNESSCWIPKRVTGALQGLYVSYVACGPWHTAVVASSGQL 415

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           ++FG GS   LGHG++     PR ++     G+ V +V+ G  H  AL
Sbjct: 416 FTFGDGSFGALGHGDRRSTSVPREVKIL--SGLIVTKVACGVWHTAAL 461



 Score = 64.3 bits (155), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 93/376 (24%), Positives = 144/376 (38%), Gaps = 58/376 (15%)

Query: 23  TSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVD--LAASQLC---------ALHS-- 69
           +S R S  D   L L+S     SHG Y + F +L D  +    +C         +L+S  
Sbjct: 213 SSLRFSTNDPIRLSLSSAVSTSSHGSYHEDFDALGDVFVWGESICDGVLTGTGNSLNSTT 272

Query: 70  ----IYAGMSRNVQIELLN----RCNG----------NWKRVLRFLQSVEHSSDIVETS- 110
               +   +   + ++  N    +C+           +W             +D+ +   
Sbjct: 273 EDVLLPKALESTIVLDAQNIACGKCHAVLVTKQGEIFSWGEGKGGKLGHGLETDVQQPKF 332

Query: 111 ------AGNMQITTGRYHTLLISNS-SVFSCGSSLCGV--LGHGPETTQCVSFTRINFPS 161
                  G   +  G +HT  I+ S  ++S G     V  LGHG E++  +         
Sbjct: 333 ISSVRGLGFKSLACGDFHTCAITQSGDLYSWGDGTHNVDLLGHGNESSCWIPKRVTGALQ 392

Query: 162 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
             +V  V+    H A V  SGQ+FT GD S    GH D  R    PR V+ L G+   +V
Sbjct: 393 GLYVSYVACGPWHTAVVASSGQLFTFGDGSFGALGHGD-RRSTSVPREVKILSGLIVTKV 451

Query: 222 TAGLNFTGFL-------------TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 268
             G+  T  L             + RG V T G    GQLGHGD   +  P+ +  L   
Sbjct: 452 ACGVWHTAALVEVTNEASEAEVGSSRGQVFTWGDGEKGQLGHGDNDAQLLPECVISLSN- 510

Query: 269 GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 328
            ++ Q+A G S  +++T  G VY+ GS +   LG+         R         +    +
Sbjct: 511 ENICQVACGHSLTVSLTSTGHVYTMGSTAYGQLGNPTAKGNFPARVEGDIVEASVE--EI 568

Query: 329 SAGDEHVVALDSSGYV 344
           + G  HV  L S   +
Sbjct: 569 ACGSYHVAVLTSKSEI 584


>gi|403303294|ref|XP_003942271.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
           [Saimiri boliviensis boliviensis]
          Length = 556

 Score = 81.3 bits (199), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 96/218 (44%), Gaps = 4/218 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  +F  G++ CG LG G +    +   R++  S   +  +S  S  H       G+VFT
Sbjct: 69  NDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFT 127

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN  +    +   L      +V  G   +  LT  G V   G N  G
Sbjct: 128 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 187

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T+++P P+ +    +   VV IA G    +AV  +G VY +G   N  LG G  
Sbjct: 188 QVGSGSTINQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGNGQLGLGNS 247

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            +  QP   +    +GI V RV+ G  H + L   G V
Sbjct: 248 GN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQV 283



 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 57/187 (30%), Positives = 93/187 (49%), Gaps = 12/187 (6%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G YH+L L S+  VF+ G +  G +G G    Q +            VV ++  +
Sbjct: 160 IEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTINQPIPRRVTGCLQNKVVVTIACGQ 219

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
                V+ SG+V+  G N +   G  ++ N+P   P  V AL+G+  ++V  G   T  L
Sbjct: 220 MCCMAVVDSGEVYVWGYNGNGQLGLGNSGNQPT--PCRVAALQGIRVQRVACGYAHTLVL 277

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDR--PTPKSIAPLEEVGSVVQIAAGPS--YMLAVTGN 287
           T  G V+  G+N++GQLG G+  ++  PTP ++    E   +++IAA  S     A T  
Sbjct: 278 TDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTV----EKDRIIEIAACHSTHTSAAKTQG 333

Query: 288 GVVYSFG 294
           G VY +G
Sbjct: 334 GHVYMWG 340



 Score = 39.7 bits (91), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 65/145 (44%), Gaps = 6/145 (4%)

Query: 203 PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 260
           PIF     E L+ +   C   +AG N   + T+   +   G+N  G LG GD      P+
Sbjct: 37  PIFSLCSEEELQLIRQACVFGSAG-NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPR 95

Query: 261 SIAPLE-EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
            +  L  +  + +   +GP  +LA T  G V+++G  +   LG+G  +  L P  I T  
Sbjct: 96  RLDSLSGKKIACLSYGSGPHIVLATT-EGEVFTWGHNAYSQLGNGTTNHGLVPCHIST-N 153

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYV 344
                V+ V+ G  H + L S G V
Sbjct: 154 LSNKQVIEVACGSYHSLVLTSDGEV 178


>gi|145594515|ref|YP_001158812.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
           CNB-440]
 gi|145303852|gb|ABP54434.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
           CNB-440]
          Length = 554

 Score = 81.3 bits (199), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 70/228 (30%), Positives = 107/228 (46%), Gaps = 9/228 (3%)

Query: 119 GRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 177
           GR H+L ++++ +V + GS+  G LG G  T +    T +  P+   +  ++AS    A 
Sbjct: 150 GRRHSLALTDTGAVLAWGSNSNGQLGDGTTTARSTPVT-VGLPAGTTITALAASTYSLAL 208

Query: 178 VLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
              +G     G NS    G    T+R    P  V    G     + A  + +  LT  G 
Sbjct: 209 T-DTGAALAWGSNSRGQLGDGTTTDR--STPVTVSLPAGTTITALAASYDHSLALTDTGA 265

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           V   GSN++GQLG G T +R TP ++  L    ++  +AAG S+ L +T  G V ++GS 
Sbjct: 266 VLAWGSNSNGQLGDGTTTNRSTPVTVG-LPAGTTITALAAGRSHTLVLTSAGAVLAWGSN 324

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           SN  LG G   D   P  +      G  +  ++AG  H +AL  +G V
Sbjct: 325 SNGQLGDGTTTDRSTP--VTVGLPAGTTITALAAGYYHSLALTDTGAV 370



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/219 (30%), Positives = 100/219 (45%), Gaps = 7/219 (3%)

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           Y   L    +  + GS+  G LG G  T +    T ++ P+   +  ++AS +H+  +  
Sbjct: 204 YSLALTDTGAALAWGSNSRGQLGDGTTTDRSTPVT-VSLPAGTTITALAASYDHSLALTD 262

Query: 181 SGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
           +G V   G NS+   G    TNR    P  V    G     + AG + T  LT  G V  
Sbjct: 263 TGAVLAWGSNSNGQLGDGTTTNR--STPVTVGLPAGTTITALAAGRSHTLVLTSAGAVLA 320

Query: 240 CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
            GSN++GQLG G T DR TP ++  L    ++  +AAG  + LA+T  G V ++G  S  
Sbjct: 321 WGSNSNGQLGDGTTTDRSTPVTVG-LPAGTTITALAAGYYHSLALTDTGAVLAWGGNSYG 379

Query: 300 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            LG G   D   P  +      G  +  + + D H +AL
Sbjct: 380 QLGDGTTTDRSTP--VTVGLPAGTTITVLVSMDNHGMAL 416



 Score = 74.7 bits (182), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 62/216 (28%), Positives = 95/216 (43%), Gaps = 8/216 (3%)

Query: 130 SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 189
           +V + G +  G LG G  T +    T +  P+   +  ++A  +H+  +  +G V   G 
Sbjct: 58  TVLAWGDNFSGQLGDGTTTARSTPVT-VGLPAGTTITALAAGGSHSLALTDTGVVLAWGS 116

Query: 190 NSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 248
           NS    G    T+R    P  V    G     + AG   +  LT  G V   GSN++GQL
Sbjct: 117 NSRGQLGDGTTTDR--STPVTVGLPAGTTITALAAGRRHSLALTDTGAVLAWGSNSNGQL 174

Query: 249 GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD 308
           G G T  R TP ++      G+ +   A  +Y LA+T  G   ++GS S   LG G   D
Sbjct: 175 GDGTTTARSTPVTVG--LPAGTTITALAASTYSLALTDTGAALAWGSNSRGQLGDGTTTD 232

Query: 309 ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              P  +      G  +  ++A  +H +AL  +G V
Sbjct: 233 RSTPVTVS--LPAGTTITALAASYDHSLALTDTGAV 266


>gi|218779101|ref|YP_002430419.1| chromosome condensation regulator RCC1 [Desulfatibacillum
           alkenivorans AK-01]
 gi|218760485|gb|ACL02951.1| regulator of chromosome condensation RCC1 [Desulfatibacillum
           alkenivorans AK-01]
          Length = 671

 Score = 81.3 bits (199), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 67/221 (30%), Positives = 102/221 (46%), Gaps = 16/221 (7%)

Query: 107 VETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV 165
           VE  +  + +  G  HTL L  + SV+S G +  G LG G         T     + ++V
Sbjct: 173 VEALSNAVALAAGDDHTLALTRDGSVWSWGWNYNGQLGLGSIHEDTYESTPKKVEAISNV 232

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
             ++A   H   + + G V++ G N     G  D N     P+ VEAL  V    + AG 
Sbjct: 233 TAIAAQTYHTQALTRDGNVWSWGSNDFGQLGMGDQNDRD-APQKVEALSNVVA--INAGG 289

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
           N +  +T  G V   G N+ GQLG GD  DR  P+ +   E + +VV I AG  + LA+T
Sbjct: 290 NHSLAVTRDGQVWAWGENSEGQLGLGDLWDRDAPQKV---EALSNVVAINAGGDHTLALT 346

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
            +G V+++G      +G GE          Q+   + +HV+
Sbjct: 347 RDGSVWAWGKNGRGQIGTGEG---------QSLYNEPVHVI 378



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 72/242 (29%), Positives = 105/242 (43%), Gaps = 42/242 (17%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + +  G  H+L +S + SV+S GS+  G LG         S T  +  +  H        
Sbjct: 41  VSLAGGEKHSLAVSGDGSVWSWGSNSAGQLG-------VESLTPASVLAPVHA------- 86

Query: 173 NHAAFVLQSGQVF-----TCGDNSSFCCGHRDTNRPIFR--PRLVEALKGVPCKQVTAGL 225
                 L SG  F     T GD +   C   D     F+  P L      VP   + AG 
Sbjct: 87  ------LYSGDDFHLFYDTDGDGTGDIC--DDCPYDPFKTAPGLSGCGNAVP--MLAAGT 136

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            F+  L   G V + G NT+  LG GD +DR TP+ +   E + + V +AAG  + LA+T
Sbjct: 137 QFSLGLKTDGTVWSWGCNTYATLGLGDRVDRNTPQKV---EALSNAVALAAGDDHTLALT 193

Query: 286 GNGVVYSFGSGSNFCLGHGEQHD---ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            +G V+S+G   N  LG G  H+   E  P+ ++       +V  ++A   H  AL   G
Sbjct: 194 RDGSVWSWGWNYNGQLGLGSIHEDTYESTPKKVEAIS----NVTAIAAQTYHTQALTRDG 249

Query: 343 YV 344
            V
Sbjct: 250 NV 251



 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/142 (35%), Positives = 73/142 (51%), Gaps = 14/142 (9%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG----HGDTLDRPTPKSI 262
           P+ VEAL       + AG + T  LT  G V + G N +GQLG    H DT    TPK +
Sbjct: 170 PQKVEALSNAVA--LAAGDDHTLALTRDGSVWSWGWNYNGQLGLGSIHEDTY-ESTPKKV 226

Query: 263 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
              E + +V  IAA   +  A+T +G V+S+GS     LG G+Q+D   P+ ++      
Sbjct: 227 ---EAISNVTAIAAQTYHTQALTRDGNVWSWGSNDFGQLGMGDQNDRDAPQKVEALS--- 280

Query: 323 IHVVRVSAGDEHVVALDSSGYV 344
            +VV ++AG  H +A+   G V
Sbjct: 281 -NVVAINAGGNHSLAVTRDGQV 301



 Score = 45.1 bits (105), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 3/72 (4%)

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           +T  G + T G N  G+LG G T D+  P  ++ L    +VV +A G  + LAV+G+G V
Sbjct: 3   VTQGGALWTWGGNDDGRLGIGATGDQNLPVQLSYLS---NVVSLAGGEKHSLAVSGDGSV 59

Query: 291 YSFGSGSNFCLG 302
           +S+GS S   LG
Sbjct: 60  WSWGSNSAGQLG 71


>gi|270002050|gb|EEZ98497.1| hypothetical protein TcasGA2_TC000997 [Tribolium castaneum]
          Length = 1042

 Score = 81.3 bits (199), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 69/218 (31%), Positives = 106/218 (48%), Gaps = 11/218 (5%)

Query: 131 VFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 189
           +F  GS++ G LG G  E     +   +++  A  V++ +   NH  F+ + G+V++CG 
Sbjct: 1   MFGWGSTIHGELGLGGIEEEHVFTPKALDWFEAKSVMKAALGANHTLFLTKDGKVYSCGS 60

Query: 190 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
           N     GH   ++P  RP+LV  L       V  G   +  L+  G V + GS+ +GQLG
Sbjct: 61  NDYGQLGH---DQPRKRPQLVSGLDAYSIINVACGEMHSLALSRWGEVFSWGSDNYGQLG 117

Query: 250 H--GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-Q 306
           H  G TL +  PK I  L +   VVQIAAG  + +A+T  G ++ +G+     LG G   
Sbjct: 118 HQLGGTL-QIVPKLIKSLAKY-QVVQIAAGQRHSVALTNAGEIFVWGANDFGQLGLGTIT 175

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             E  P  + +    GI    ++ G  H  A+  SG V
Sbjct: 176 PYESTPTTVCSL--SGIPFALIACGANHTFAVSKSGAV 211



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/236 (27%), Positives = 111/236 (47%), Gaps = 8/236 (3%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           M+   G  HTL ++ +  V+SCGS+  G LGH     +    + ++   A  ++ V+  E
Sbjct: 37  MKAALGANHTLFLTKDGKVYSCGSNDYGQLGHDQPRKRPQLVSGLD---AYSIINVACGE 93

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  + + G+VF+ G ++    GH+        P+L+++L      Q+ AG   +  LT
Sbjct: 94  MHSLALSRWGEVFSWGSDNYGQLGHQLGGTLQIVPKLIKSLAKYQVVQIAAGQRHSVALT 153

Query: 233 IRGHVHTCGSNTHGQLGHGD-TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
             G +   G+N  GQLG G  T    TP ++  L  +   + IA G ++  AV+ +G V+
Sbjct: 154 NAGEIFVWGANDFGQLGLGTITPYESTPTTVCSLSGIPFAL-IACGANHTFAVSKSGAVF 212

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSLC 347
            +G   N  LG  +   +  P  ++T R   +    +S GDE    L   G V  C
Sbjct: 213 GWGKNINGQLGLNDTVSKKFPTQLRTLRNSRVRF--ISCGDEFSTFLTLDGGVFSC 266



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/183 (32%), Positives = 94/183 (51%), Gaps = 6/183 (3%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QI  G+ H++ ++N+  +F  G++  G LG G  T    + T +   S      ++   
Sbjct: 140 VQIAAGQRHSVALTNAGEIFVWGANDFGQLGLGTITPYESTPTTVCSLSGIPFALIACGA 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           NH   V +SG VF  G N +   G  DT    F P  +  L+    + ++ G  F+ FLT
Sbjct: 200 NHTFAVSKSGAVFGWGKNINGQLGLNDTVSKKF-PTQLRTLRNSRVRFISCGDEFSTFLT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGNGVV 290
           + G V +CG+  +GQLGHG T +   P+ +  LE +GS + QI+ G  + LA V   G V
Sbjct: 259 LDGGVFSCGAGMYGQLGHGGTSNEILPRQV--LELMGSTITQISCGRQHSLAFVPSRGRV 316

Query: 291 YSF 293
           YS+
Sbjct: 317 YSY 319


>gi|440798701|gb|ELR19768.1| regulator of chromosome condensation (RCC1) repeat domain
           containing protein [Acanthamoeba castellanii str. Neff]
          Length = 351

 Score = 81.3 bits (199), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 67/202 (33%), Positives = 98/202 (48%), Gaps = 9/202 (4%)

Query: 151 CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRP---IFRP 207
           C + TRI       VV V+A  +H+ F+   G+VF CG++     G  + ++P   +  P
Sbjct: 43  CRTPTRIKAFQGIRVVSVAAGWHHSVFLTACGEVFACGNSKEGKLGQGE-DKPDASLHEP 101

Query: 208 RLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL-- 265
           R V  L+ V   +V AG   T  LT  G +++ G   +G+LG GD  DR     I  L  
Sbjct: 102 RRVVGLEDVTAIRVVAGAFHTLVLTSTGTLYSFGYGRNGRLGLGDANDRSVATLITGLCG 161

Query: 266 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
           EE   VVQ++ G  + LAVT  G  Y++G GS   LG    ++++    +     +   V
Sbjct: 162 EE---VVQMSGGNMHSLAVTKTGRAYAWGDGSYGILGLPAVNEDVTTPMLIGGAFEAKRV 218

Query: 326 VRVSAGDEHVVALDSSGYVSLC 347
           V  SAGD H + L   G V  C
Sbjct: 219 VAASAGDFHNLFLTDDGQVFSC 240



 Score = 44.3 bits (103), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 52/199 (26%), Positives = 84/199 (42%), Gaps = 28/199 (14%)

Query: 105 DIVETSAGNMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRI--NFPS 161
           ++V+ S GNM       H+L ++ +   ++ G    G+LG  P   + V+   +      
Sbjct: 163 EVVQMSGGNM-------HSLAVTKTGRAYAWGDGSYGILGL-PAVNEDVTTPMLIGGAFE 214

Query: 162 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFC-----------CGHRDTNRPIFRPRLV 210
           A  VV  SA + H  F+   GQVF+CG +S+              G+  T      P+L+
Sbjct: 215 AKRVVAASAGDFHNLFLTDDGQVFSCGRDSATLNTLQTRDGNGRLGYAVTADAQCEPKLI 274

Query: 211 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ----LGHGDTLDRPTPKSIAPLE 266
            AL       V A  ++     +  H    G  T+ Q    LGHG T    TPK I  L 
Sbjct: 275 PALAD-KVATVIAAASWALNPMLSQHHQLSGLGTYSQTSARLGHGTTDTVTTPKKIEKLA 333

Query: 267 EVGSVVQIAAGPSYMLAVT 285
              ++  +++   + LA+T
Sbjct: 334 PF-AIQSVSSNGRHTLALT 351



 Score = 40.4 bits (93), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 81/189 (42%), Gaps = 7/189 (3%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCV--SFTRINFPSAAHVVQVSA 170
           + +  G +H++ ++    VF+CG+S  G LG G +          R+        ++V A
Sbjct: 58  VSVAAGWHHSVFLTACGEVFACGNSKEGKLGQGEDKPDASLHEPRRVVGLEDVTAIRVVA 117

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              H   +  +G +++ G   +   G  D N R +    L+  L G    Q++ G   + 
Sbjct: 118 GAFHTLVLTSTGTLYSFGYGRNGRLGLGDANDRSV--ATLITGLCGEEVVQMSGGNMHSL 175

Query: 230 FLTIRGHVHTCGSNTHGQLG-HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
            +T  G  +  G  ++G LG      D  TP  I    E   VV  +AG  + L +T +G
Sbjct: 176 AVTKTGRAYAWGDGSYGILGLPAVNEDVTTPMLIGGAFEAKRVVAASAGDFHNLFLTDDG 235

Query: 289 VVYSFGSGS 297
            V+S G  S
Sbjct: 236 QVFSCGRDS 244


>gi|167517927|ref|XP_001743304.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163778403|gb|EDQ92018.1| predicted protein [Monosiga brevicollis MX1]
          Length = 850

 Score = 81.3 bits (199), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 72/236 (30%), Positives = 107/236 (45%), Gaps = 24/236 (10%)

Query: 116 ITTGRYHTLLISNSS-VFSCGS------SLCGVLGHGPETTQCVSFTRINFPSAAHVVQV 168
           I  G+  T +I     ++SCGS       +   LGH        S   +    +   +QV
Sbjct: 37  IALGQRGTFVIDGEGRLWSCGSHTRPQNDVKSFLGHAES-----SLALVEGLESERFIQV 91

Query: 169 SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
           SA+ +  A  LQ G+V++ G NS    G    N    RP  + AL+G    QV AG + +
Sbjct: 92  SATSHVLAVTLQ-GEVYSWGSNSYKQLGRDGVNN---RPMKITALEGEEVVQVCAGGHHS 147

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA--GPSYMLAVTG 286
             ++  G+++T G   +G+LGHG + D   P  +A   E   VV +A   G ++ + VT 
Sbjct: 148 AAVSKAGNLYTWGRGGYGRLGHGTSDDVNVPTRVAAFPEGIRVVHVACGLGDAHSMCVTE 207

Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           +G +YSFG G    LGHG      QP  I         +V+V  G     A+  SG
Sbjct: 208 DGHIYSFGDGDFGKLGHGTNDRRRQPERID------FDIVKVVCGSSTSAAISLSG 257



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 71/259 (27%), Positives = 110/259 (42%), Gaps = 20/259 (7%)

Query: 93  VLRFLQSVEHSSDIVE--TSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQ 150
           V  FL   E S  +VE   S   +Q++   +   +     V+S GS+    LG      +
Sbjct: 66  VKSFLGHAESSLALVEGLESERFIQVSATSHVLAVTLQGEVYSWGSNSYKQLGRDGVNNR 125

Query: 151 CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRP 207
            +  T +       VVQV A  +H+A V ++G ++T G       GH    D N P    
Sbjct: 126 PMKITALE---GEEVVQVCAGGHHSAAVSKAGNLYTWGRGGYGRLGHGTSDDVNVPT--- 179

Query: 208 RLVEALKGVPCKQVTAGLN--FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 265
           R+    +G+    V  GL    +  +T  GH+++ G    G+LGHG    R  P+ I   
Sbjct: 180 RVAAFPEGIRVVHVACGLGDAHSMCVTEDGHIYSFGDGDFGKLGHGTNDRRRQPERID-- 237

Query: 266 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
                +V++  G S   A++ +G +Y +G G  + LG G +    QPR           V
Sbjct: 238 ---FDIVKVVCGSSTSAAISLSGALYVWGGGRRYRLGTGTEAVIWQPRTAHALNTH--KV 292

Query: 326 VRVSAGDEHVVALDSSGYV 344
           V  +   EH VA+   G V
Sbjct: 293 VDCALSSEHGVAVTDRGEV 311



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 80/167 (47%), Gaps = 21/167 (12%)

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           VF+ G+      G+   N+P+  P++   L  +    +  G   T  +   G + +CGS+
Sbjct: 1   VFSWGNTRDAELGYV-ANQPVESPQINTLLSRLNPTHIALGQRGTFVIDGEGRLWSCGSH 59

Query: 244 THGQ------LGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
           T  Q      LGH ++       S+A +E  E    +Q++A  S++LAVT  G VYS+GS
Sbjct: 60  TRPQNDVKSFLGHAES-------SLALVEGLESERFIQVSA-TSHVLAVTLQGEVYSWGS 111

Query: 296 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            S   LG     D +  R ++    +G  VV+V AG  H  A+  +G
Sbjct: 112 NSYKQLG----RDGVNNRPMKITALEGEEVVQVCAGGHHSAAVSKAG 154



 Score = 39.3 bits (90), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 56/132 (42%), Gaps = 7/132 (5%)

Query: 119 GRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 177
           G  H++ ++    ++S G    G LGHG    +     RI+F     +V+V    + +A 
Sbjct: 198 GDAHSMCVTEDGHIYSFGDGDFGKLGHGTNDRRRQP-ERIDF----DIVKVVCGSSTSAA 252

Query: 178 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
           +  SG ++  G    +  G   T   I++PR   AL                 +T RG V
Sbjct: 253 ISLSGALYVWGGGRRYRLG-TGTEAVIWQPRTAHALNTHKVVDCALSSEHGVAVTDRGEV 311

Query: 238 HTCGSNTHGQLG 249
              G+N HGQLG
Sbjct: 312 FVWGANDHGQLG 323


>gi|349605413|gb|AEQ00660.1| putative E3 ubiquitin-protein ligase HERC4-like protein, partial
           [Equus caballus]
          Length = 911

 Score = 81.3 bits (199), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 68/206 (33%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   I        +QV+A  
Sbjct: 1   VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDYKKQASPQLIKSLLGIPFMQVAAGG 60

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   F P L+++L+      +  G + T  LT
Sbjct: 61  AHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYF-PNLLKSLRTQKIVYICCGEDHTAALT 119

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 120 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 177

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 178 YSFGLGGNGQLGTGSTSNRKSPFTVK 203



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 87/180 (48%), Gaps = 4/180 (2%)

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
           VQV+    H+  + ++ +VF  G N     G     +    P+L+++L G+P  QV AG 
Sbjct: 1   VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDYKKQASPQLIKSLLGIPFMQVAAGG 60

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
             +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V I  G  +  A+T
Sbjct: 61  AHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYFPNLLKSL-RTQKIVYICCGEDHTAALT 119

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYV 344
             G V++FG+G    LGH     E+ PR +  F   G  V +++ G +H  A + SSG +
Sbjct: 120 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 177


>gi|149043902|gb|EDL97353.1| rCG61079, isoform CRA_b [Rattus norvegicus]
          Length = 1049

 Score = 81.3 bits (199), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 68/206 (33%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S +S VF  G +  G LG G E  +  S   I        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 107/226 (47%), Gaps = 7/226 (3%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G + +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G    + T P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIECQKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGV 263



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 64/213 (30%), Positives = 96/213 (45%), Gaps = 9/213 (4%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G E   +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           P+ I++    GI  ++V+AG  H   L  SG +
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAI 211


>gi|194864811|ref|XP_001971119.1| GG14780 [Drosophila erecta]
 gi|190652902|gb|EDV50145.1| GG14780 [Drosophila erecta]
          Length = 1058

 Score = 81.3 bits (199), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 69/208 (33%), Positives = 107/208 (51%), Gaps = 10/208 (4%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLG-HGP-ETTQCVSFTRINFPSAAHVVQVSA 170
           +QI  G  H+L L S   ++S GS++ G LG + P + T C    R+       +  ++ 
Sbjct: 146 VQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPKDLTHCNYPLRLTTLLGIPLAAIAC 205

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
             NH+  + +SG VF  G N+    G  D TNR    P  ++ L+ +  + V  G  F+ 
Sbjct: 206 GGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRAY--PTQLKTLRTLGVRFVACGDEFSV 263

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGN 287
           FLT  G V TCG+  +GQLGHG + +   P+ +  +E +GS + Q+A G  + LA V   
Sbjct: 264 FLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMV--MELMGSTITQVACGNRHTLALVPSR 321

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAI 315
           G VY+FG GS+  LG       + P+ +
Sbjct: 322 GRVYAFGLGSSGQLGTRSTKSLMLPQVV 349



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 109/239 (45%), Gaps = 14/239 (5%)

Query: 115 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+  G  HTL L +N  V++CGS+    LGH   T + +    +       ++Q+S    
Sbjct: 44  QVACGHRHTLFLTANGKVYACGSNDHSQLGHDLPTKRPLLIPELQ---DYVIIQISCGSR 100

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  +   GQV + GDN     GH      +  P++V  L      Q+  G N +  LT 
Sbjct: 101 HSLALSDWGQVLSWGDNDCGQLGHATDKEIMQLPKVVRQLVSKTVVQIACGNNHSLALTS 160

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRP---TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            G +++ GSN +GQLG     D      P  +  L  +  +  IA G ++   ++ +G V
Sbjct: 161 CGELYSWGSNIYGQLGVNSPKDLTHCNYPLRLTTLLGI-PLAAIACGGNHSFLISKSGAV 219

Query: 291 YSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSLC 347
             FG G N C  LG  ++ +   P  ++T R  G+    V+ GDE  V L + G V  C
Sbjct: 220 --FGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRF--VACGDEFSVFLTNEGGVFTC 274



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 70/230 (30%), Positives = 104/230 (45%), Gaps = 21/230 (9%)

Query: 125 LISNSSVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 183
           + S   ++  GS+  G LG G  E  Q ++ ++I +     V QV+    H  F+  +G+
Sbjct: 1   MASGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVEQVACGHRHTLFLTANGK 60

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           V+ CG N     GH   + P  RP L+  L+     Q++ G   +  L+  G V + G N
Sbjct: 61  VYACGSNDHSQLGH---DLPTKRPLLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDN 117

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEV------GSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
             GQLGH       T K I  L +V       +VVQIA G ++ LA+T  G +YS+GS  
Sbjct: 118 DCGQLGHA------TDKEIMQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNI 171

Query: 298 NFCLGHGEQHDELQ---PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              LG     D      P  + T    GI +  ++ G  H   +  SG V
Sbjct: 172 YGQLGVNSPKDLTHCNYPLRLTTLL--GIPLAAIACGGNHSFLISKSGAV 219


>gi|410947370|ref|XP_003980422.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
           [Felis catus]
          Length = 527

 Score = 81.3 bits (199), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 94/218 (43%), Gaps = 4/218 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  +F  G++ CG LG G +    +   R++  S   +  +S  S  H       G+VFT
Sbjct: 40  NDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFT 98

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN  +    +   L      +V  G   +  LT  G V   G N  G
Sbjct: 99  WGHNAYSQLGNGTTNHGLMPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSG 158

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T ++P P+ +    +   VV IA G    +AV   G VY +G   N  LG G  
Sbjct: 159 QVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSS 218

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            ++  P  I     +GI V RV+ G  H + L   G V
Sbjct: 219 GNQPTPCRISAL--QGIRVQRVACGYAHTLVLTDEGQV 254



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 50/175 (28%), Positives = 87/175 (49%), Gaps = 9/175 (5%)

Query: 107 VETSAGNMQITT---GRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA 162
           + T+  N Q+T    G YH+L L S+  VF+ G +  G +G G    Q +          
Sbjct: 121 ISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQN 180

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQV 221
             VV ++  +  +  V+ +G+V+  G N +   G   + N+P   P  + AL+G+  ++V
Sbjct: 181 KVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPT--PCRISALQGIRVQRV 238

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
             G   T  LT  G V+  G+N++GQLG G+  ++  P  +  + E   +++IAA
Sbjct: 239 ACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPAPV--VVEKDRIIEIAA 291



 Score = 39.3 bits (90), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 64/145 (44%), Gaps = 6/145 (4%)

Query: 203 PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 260
           PIF     E L+ +   C   +AG N   + T+   +   G+N  G LG GD      P+
Sbjct: 8   PIFSLCSEEELQLIRQACVFGSAG-NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPR 66

Query: 261 SIAPLE-EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
            +  L  +  + +   +GP  +LA T  G V+++G  +   LG+G  +  L P  I T  
Sbjct: 67  RLDSLSGKKIACLSYGSGPHIVLATT-EGEVFTWGHNAYSQLGNGTTNHGLMPCHIST-N 124

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYV 344
                V  V+ G  H + L S G V
Sbjct: 125 LSNKQVTEVACGSYHSLVLTSDGEV 149


>gi|403303292|ref|XP_003942270.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
           [Saimiri boliviensis boliviensis]
          Length = 551

 Score = 81.3 bits (199), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 96/218 (44%), Gaps = 4/218 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  +F  G++ CG LG G +    +   R++  S   +  +S  S  H       G+VFT
Sbjct: 64  NDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFT 122

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN  +    +   L      +V  G   +  LT  G V   G N  G
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 182

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T+++P P+ +    +   VV IA G    +AV  +G VY +G   N  LG G  
Sbjct: 183 QVGSGSTINQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGNGQLGLGNS 242

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            +  QP   +    +GI V RV+ G  H + L   G V
Sbjct: 243 GN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQV 278



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/187 (30%), Positives = 93/187 (49%), Gaps = 12/187 (6%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G YH+L L S+  VF+ G +  G +G G    Q +            VV ++  +
Sbjct: 155 IEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTINQPIPRRVTGCLQNKVVVTIACGQ 214

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
                V+ SG+V+  G N +   G  ++ N+P   P  V AL+G+  ++V  G   T  L
Sbjct: 215 MCCMAVVDSGEVYVWGYNGNGQLGLGNSGNQPT--PCRVAALQGIRVQRVACGYAHTLVL 272

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDR--PTPKSIAPLEEVGSVVQIAAGPS--YMLAVTGN 287
           T  G V+  G+N++GQLG G+  ++  PTP ++    E   +++IAA  S     A T  
Sbjct: 273 TDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTV----EKDRIIEIAACHSTHTSAAKTQG 328

Query: 288 GVVYSFG 294
           G VY +G
Sbjct: 329 GHVYMWG 335



 Score = 39.7 bits (91), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 65/145 (44%), Gaps = 6/145 (4%)

Query: 203 PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 260
           PIF     E L+ +   C   +AG N   + T+   +   G+N  G LG GD      P+
Sbjct: 32  PIFSLCSEEELQLIRQACVFGSAG-NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPR 90

Query: 261 SIAPLE-EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
            +  L  +  + +   +GP  +LA T  G V+++G  +   LG+G  +  L P  I T  
Sbjct: 91  RLDSLSGKKIACLSYGSGPHIVLATT-EGEVFTWGHNAYSQLGNGTTNHGLVPCHIST-N 148

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYV 344
                V+ V+ G  H + L S G V
Sbjct: 149 LSNKQVIEVACGSYHSLVLTSDGEV 173


>gi|348684000|gb|EGZ23815.1| hypothetical protein PHYSODRAFT_449139 [Phytophthora sojae]
          Length = 539

 Score = 81.3 bits (199), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 83/280 (29%), Positives = 127/280 (45%), Gaps = 26/280 (9%)

Query: 81  ELLNRCNGNWKRVLRFLQSVEHSSDIVE--TSAGNMQ-ITTGRYHTL-LISNSSVFSCGS 136
           E +   NG+  R+     S E++   +E  +  G ++ +  G  HTL LI +  +++ G+
Sbjct: 230 EAMAWGNGDKYRLGHGSSSKEYTPRTIEFLSLKGRVRDLACGLGHTLALIESGELYAWGN 289

Query: 137 SLCGVLGHGPETTQCVSFTRINFPSAAHVV--QVSASENHAAFVLQSGQVFTCGDNSSFC 194
              G LG G +T    S TR N  S A V    +    +H+  +   G+ +  G N+   
Sbjct: 290 GSNGRLGLG-DTNDRSSPTRSNGASIAPVRFRHIFCGASHSLGLSWDGRAYAWGKNNQGQ 348

Query: 195 CGHRDTNRPIFRPRLVEALKGVPCKQ-------VTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           CGH  TN   +  + +E+ +     +          G   T F T  G V++CG      
Sbjct: 349 CGHGHTNDQ-WTIQEIESFRDTEEGEEEEFVVYAAGGWEHTLFCTASGRVYSCGCGYKDS 407

Query: 248 --------LGHGDTLDRPTPKSIAPLEEV-GSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
                   LGHGD   R  P S+  L++    VV++A G  + LAVT NG VY++GSG+N
Sbjct: 408 RRAGIPPVLGHGDCDRRLKPTSVQALDDTHEEVVKVACGWDHSLAVTANGRVYTWGSGAN 467

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             LGHG++     P  ++     G  V    AG EH V L
Sbjct: 468 GKLGHGDEESFDIPTLVRCM--DGKKVKDAKAGCEHTVFL 505



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/219 (28%), Positives = 97/219 (44%), Gaps = 17/219 (7%)

Query: 142 LGHGPETTQCVSFTRINFPS-AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT 200
           LGHG  + +    T I F S    V  ++    H   +++SG+++  G+ S+   G  DT
Sbjct: 242 LGHGSSSKEYTPRT-IEFLSLKGRVRDLACGLGHTLALIESGELYAWGNGSNGRLGLGDT 300

Query: 201 NRPIFRPRLVEA-LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP 259
           N      R   A +  V  + +  G + +  L+  G  +  G N  GQ GHG T D+ T 
Sbjct: 301 NDRSSPTRSNGASIAPVRFRHIFCGASHSLGLSWDGRAYAWGKNNQGQCGHGHTNDQWTI 360

Query: 260 KSIAPLEEVGS------VVQIAAGPSYMLAVTGNGVVYSFGSGSNF--------CLGHGE 305
           + I    +         VV  A G  + L  T +G VYS G G            LGHG+
Sbjct: 361 QEIESFRDTEEGEEEEFVVYAAGGWEHTLFCTASGRVYSCGCGYKDSRRAGIPPVLGHGD 420

Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
               L+P ++Q        VV+V+ G +H +A+ ++G V
Sbjct: 421 CDRRLKPTSVQALDDTHEEVVKVACGWDHSLAVTANGRV 459



 Score = 65.1 bits (157), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 54/163 (33%), Positives = 71/163 (43%), Gaps = 29/163 (17%)

Query: 119 GRYHTLLISNSS-VFSCGSSLCG-----------VLGHG-------PETTQCVSFTRINF 159
           G  HTL  + S  V+SCG   CG           VLGHG       P + Q +  T    
Sbjct: 384 GWEHTLFCTASGRVYSCG---CGYKDSRRAGIPPVLGHGDCDRRLKPTSVQALDDTH--- 437

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 219
                VV+V+   +H+  V  +G+V+T G  ++   GH D       P LV  + G   K
Sbjct: 438 ---EEVVKVACGWDHSLAVTANGRVYTWGSGANGKLGHGD-EESFDIPTLVRCMDGKKVK 493

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
              AG   T FLT    + TCG    G+LGHGD+  R  P  I
Sbjct: 494 DAKAGCEHTVFLTYDHELWTCGQGDSGRLGHGDSQTRKRPTKI 536



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 98/227 (43%), Gaps = 33/227 (14%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH------VVQV 168
           I  G  H+L +S +   ++ G +  G  GHG    Q       +F           VV  
Sbjct: 322 IFCGASHSLGLSWDGRAYAWGKNNQGQCGHGHTNDQWTIQEIESFRDTEEGEEEEFVVYA 381

Query: 169 SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR----PIF---------RPRLVEALKG 215
           +    H  F   SG+V++CG      CG++D+ R    P+          +P  V+AL  
Sbjct: 382 AGGWEHTLFCTASGRVYSCG------CGYKDSRRAGIPPVLGHGDCDRRLKPTSVQALDD 435

Query: 216 V--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD--TLDRPTPKSIAPLEEVGSV 271
                 +V  G + +  +T  G V+T GS  +G+LGHGD  + D PT   +    +   V
Sbjct: 436 THEEVVKVACGWDHSLAVTANGRVYTWGSGANGKLGHGDEESFDIPT---LVRCMDGKKV 492

Query: 272 VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 318
               AG  + + +T +  +++ G G +  LGHG+     +P  I+ F
Sbjct: 493 KDAKAGCEHTVFLTYDHELWTCGQGDSGRLGHGDSQTRKRPTKIELF 539



 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 56/106 (52%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P ++ A + V  +++ +    +  +T +G     G+    +LGHG +    TP++I  L 
Sbjct: 201 PTMIAATRDVLFRKIDSLSTHSIAITAKGEAMAWGNGDKYRLGHGSSSKEYTPRTIEFLS 260

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQP 312
             G V  +A G  + LA+  +G +Y++G+GSN  LG G+ +D   P
Sbjct: 261 LKGRVRDLACGLGHTLALIESGELYAWGNGSNGRLGLGDTNDRSSP 306



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 57/119 (47%), Gaps = 13/119 (10%)

Query: 235 GHVHTCGSNTHGQLGHGD-----------TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G++ + G   HG+LGHG            T ++  P  IA   +V    +I +  ++ +A
Sbjct: 166 GYLMSFGKGDHGKLGHGQCSHVSCQEGNCTENKMVPTMIAATRDV-LFRKIDSLSTHSIA 224

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           +T  G   ++G+G  + LGHG    E  PR I+    KG  V  ++ G  H +AL  SG
Sbjct: 225 ITAKGEAMAWGNGDKYRLGHGSSSKEYTPRTIEFLSLKG-RVRDLACGLGHTLALIESG 282


>gi|355749435|gb|EHH53834.1| E3 ISG15--protein ligase HERC5 [Macaca fascicularis]
          Length = 854

 Score = 81.3 bits (199), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 63/202 (31%), Positives = 99/202 (49%), Gaps = 9/202 (4%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G     ++    +F+ G +L G LG G +     +   +   +   + Q+SA E H+  +
Sbjct: 72  GNLSRFIVRGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMAL 131

Query: 179 LQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             SG +++ G N       GH ++      P L+EAL     + +  G + +  LT  G 
Sbjct: 132 SMSGNIYSWGKNEFGQLGLGHTESKD---SPSLIEALDNQKVEFLACGGSHSALLTQDGL 188

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGNGVVYSFG 294
           + T G+  HGQLGH  T +   P  +A L  VG+ V QIA G  + LA V+  G V+SFG
Sbjct: 189 LFTFGAGKHGQLGHNSTQNELRPCLVAEL--VGNRVTQIACGRWHTLAYVSDFGKVFSFG 246

Query: 295 SGSNFCLGHGEQHDELQPRAIQ 316
           SG +  LG+G   D+L P  ++
Sbjct: 247 SGKDGQLGNGGTLDQLIPLPVK 268



 Score = 77.4 bits (189), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 87/165 (52%), Gaps = 3/165 (1%)

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           N + F+++ G++F  G N     G          P++VE L GVP  Q++AG   +  L+
Sbjct: 73  NLSRFIVRGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALS 132

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
           + G++++ G N  GQLG G T  + +P  I  L+    V  +A G S+   +T +G++++
Sbjct: 133 MSGNIYSWGKNEFGQLGLGHTESKDSPSLIEALDN-QKVEFLACGGSHSALLTQDGLLFT 191

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           FG+G +  LGH    +EL+P  +      G  V +++ G  H +A
Sbjct: 192 FGAGKHGQLGHNSTQNELRPCLVAELV--GNRVTQIACGRWHTLA 234



 Score = 45.8 bits (107), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 57/125 (45%), Gaps = 14/125 (11%)

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP--LEEVGSV--VQIAAGPSYM 281
           N + F+   G +   G N HGQLG G    R  P +  P  +E +  V   QI+AG ++ 
Sbjct: 73  NLSRFIVRGGELFAWGQNLHGQLGVG----RKFPSTTTPQIVEHLAGVPLAQISAGEAHS 128

Query: 282 LAVTGNGVVYSFGSGS--NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
           +A++ +G +YS+G        LGH E  D   P  I+    + +    ++ G  H   L 
Sbjct: 129 MALSMSGNIYSWGKNEFGQLGLGHTESKD--SPSLIEALDNQKVEF--LACGGSHSALLT 184

Query: 340 SSGYV 344
             G +
Sbjct: 185 QDGLL 189


>gi|410947368|ref|XP_003980421.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
           [Felis catus]
          Length = 551

 Score = 81.3 bits (199), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 94/218 (43%), Gaps = 4/218 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  +F  G++ CG LG G +    +   R++  S   +  +S  S  H       G+VFT
Sbjct: 64  NDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFT 122

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN  +    +   L      +V  G   +  LT  G V   G N  G
Sbjct: 123 WGHNAYSQLGNGTTNHGLMPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSG 182

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T ++P P+ +    +   VV IA G    +AV   G VY +G   N  LG G  
Sbjct: 183 QVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSS 242

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            ++  P  I     +GI V RV+ G  H + L   G V
Sbjct: 243 GNQPTPCRISAL--QGIRVQRVACGYAHTLVLTDEGQV 278



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 50/175 (28%), Positives = 87/175 (49%), Gaps = 9/175 (5%)

Query: 107 VETSAGNMQITT---GRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA 162
           + T+  N Q+T    G YH+L L S+  VF+ G +  G +G G    Q +          
Sbjct: 145 ISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQN 204

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQV 221
             VV ++  +  +  V+ +G+V+  G N +   G   + N+P   P  + AL+G+  ++V
Sbjct: 205 KVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPT--PCRISALQGIRVQRV 262

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
             G   T  LT  G V+  G+N++GQLG G+  ++  P  +  + E   +++IAA
Sbjct: 263 ACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPAPV--VVEKDRIIEIAA 315



 Score = 39.3 bits (90), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 64/145 (44%), Gaps = 6/145 (4%)

Query: 203 PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 260
           PIF     E L+ +   C   +AG N   + T+   +   G+N  G LG GD      P+
Sbjct: 32  PIFSLCSEEELQLIRQACVFGSAG-NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPR 90

Query: 261 SIAPLE-EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
            +  L  +  + +   +GP  +LA T  G V+++G  +   LG+G  +  L P  I T  
Sbjct: 91  RLDSLSGKKIACLSYGSGPHIVLATT-EGEVFTWGHNAYSQLGNGTTNHGLMPCHIST-N 148

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYV 344
                V  V+ G  H + L S G V
Sbjct: 149 LSNKQVTEVACGSYHSLVLTSDGEV 173


>gi|302799595|ref|XP_002981556.1| hypothetical protein SELMODRAFT_179009 [Selaginella moellendorffii]
 gi|300150722|gb|EFJ17371.1| hypothetical protein SELMODRAFT_179009 [Selaginella moellendorffii]
          Length = 430

 Score = 81.3 bits (199), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 95/208 (45%), Gaps = 3/208 (1%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HT  +++S  ++  G    G LG G    + +    +       +  V+    H
Sbjct: 167 LAAGAEHTAAVTDSGKLYGWGWGRYGNLGLGDRGDRMLP-AEVPAVGDEKMCMVACGWRH 225

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V QSG+++T G +     GH D    +  P  V AL      QV+ G   T  LT  
Sbjct: 226 TIAVSQSGKLYTYGWSKYGQLGHGDYADHLL-PHQVAALAEFNITQVSGGWRHTVALTEA 284

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G ++  G N  GQ+G GD  D  +P+ I+   +   VVQ++ G  + +AVT    VYS+G
Sbjct: 285 GKLYGWGWNKFGQVGSGDVDDHTSPQLISIPGQHQRVVQVSCGWRHTVAVTDKNNVYSWG 344

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKG 322
            G++  LGHG+  D   P+ IQ     G
Sbjct: 345 RGTSGQLGHGDAVDRSAPKGIQALSADG 372



 Score = 77.8 bits (190), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 66/229 (28%), Positives = 110/229 (48%), Gaps = 7/229 (3%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           ++ G  HT+ L+S   V S G    G LGHG    + +    I   +   +  V+   +H
Sbjct: 10  VSAGASHTVALLSGQVVCSFGRGEDGQLGHGDAEDRLLPRI-IGALNDCEISLVACGADH 68

Query: 175 A-AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
             A+      +++ G       GH +++  +F P  ++AL+G+  +Q+  G +    +T 
Sbjct: 69  TTAYSATRLTIYSWGWGDFGRLGHGNSSD-LFVPHPIKALQGLEIRQIACGDSHCLAVTA 127

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V++ G N +GQLG GDT D   P  +   E V SV  +AAG  +  AVT +G +Y +
Sbjct: 128 DGEVYSWGRNQNGQLGLGDTDDSLVPHKLLAFEGV-SVKMLAAGAEHTAAVTDSGKLYGW 186

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           G G    LG G++ D + P  +     +   +  V+ G  H +A+  SG
Sbjct: 187 GWGRYGNLGLGDRGDRMLPAEVPAVGDE--KMCMVACGWRHTIAVSQSG 233



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 54/181 (29%), Positives = 86/181 (47%), Gaps = 13/181 (7%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HT+ +S S  +++ G S  G LGHG      +   ++   +  ++ QVS    H
Sbjct: 219 VACGWRHTIAVSQSGKLYTYGWSKYGQLGHGDYADHLLPH-QVAALAEFNITQVSGGWRH 277

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK-----QVTAGLNFTG 229
              + ++G+++  G N     G  D +     P+L+     +P +     QV+ G   T 
Sbjct: 278 TVALTEAGKLYGWGWNKFGQVGSGDVDDHT-SPQLIS----IPGQHQRVVQVSCGWRHTV 332

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
            +T + +V++ G  T GQLGHGD +DR  PK I  L   GS  +     S   AVTG+GV
Sbjct: 333 AVTDKNNVYSWGRGTSGQLGHGDAVDRSAPKGIQALSADGSACE-GLEKSPEPAVTGSGV 391

Query: 290 V 290
            
Sbjct: 392 A 392



 Score = 39.7 bits (91), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 2/71 (2%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V+ ++AG S+ +A+    VV SFG G +  LGHG+  D L PR I       I +  V+ 
Sbjct: 7   VLLVSAGASHTVALLSGQVVCSFGRGEDGQLGHGDAEDRLLPRIIGALNDCEISL--VAC 64

Query: 331 GDEHVVALDSS 341
           G +H  A  ++
Sbjct: 65  GADHTTAYSAT 75


>gi|334186523|ref|NP_001154232.2| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|332658030|gb|AEE83430.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
          Length = 1106

 Score = 81.3 bits (199), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 108/231 (46%), Gaps = 20/231 (8%)

Query: 114 MQITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G +H+ L  +N  +F+ G    GVLGHG    + VS+ + +   S    ++V+  
Sbjct: 380 LSVACGTWHSALATANGKLFTFGDGAFGVLGHGDR--ESVSYPKEVKMLSGLKTLKVACG 437

Query: 172 ENHAAFVLQ----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
             H   +++          S ++FT GD      GH +    +  P  V +L      Q+
Sbjct: 438 VWHTVAIVEVMNQTGTSTSSRKLFTWGDGDKNRLGHGNKETYLL-PTCVSSLIDYNFNQI 496

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSY 280
             G  FT  LT  GHV T G  +HGQLG  ++ D   P  +     VG  V+ I+ G  +
Sbjct: 497 ACGHTFTVALTTSGHVFTMGGTSHGQLGSSNS-DGKLP-CLVQDRLVGEFVEEISCGDHH 554

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
           +  +T    V+++G GSN  LGHG++ D   P  ++  R +  HV  +S G
Sbjct: 555 VAVLTSRSEVFTWGKGSNGRLGHGDKDDRKTPTLVEALRER--HVKSISCG 603



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/176 (30%), Positives = 83/176 (47%), Gaps = 5/176 (2%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++    H A V + G+VFT  + +    GH      + RP+LVE L       V  G
Sbjct: 272 VHQIACGVRHIALVTRQGEVFTWEEEAGGRLGH-GIQVDVCRPKLVEFLALTNIDFVACG 330

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
              T  ++  G + T G   H  G LGHG  L    PK ++   E   V+ +A G  +  
Sbjct: 331 EYHTCAVSTSGDLFTWGDGIHNVGLLGHGSDLSHWIPKRVSGPVEGLQVLSVACGTWHSA 390

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             T NG +++FG G+   LGHG++     P+ ++     G+  ++V+ G  H VA+
Sbjct: 391 LATANGKLFTFGDGAFGVLGHGDRESVSYPKEVKML--SGLKTLKVACGVWHTVAI 444



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 64/250 (25%), Positives = 104/250 (41%), Gaps = 31/250 (12%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVV 166
           QI  G  H  L++    VF+      G LGHG       P+  + ++ T I+F       
Sbjct: 274 QIACGVRHIALVTRQGEVFTWEEEAGGRLGHGIQVDVCRPKLVEFLALTNIDF------- 326

Query: 167 QVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
            V+  E H   V  SG +FT GD  ++    GH          R+   ++G+    V  G
Sbjct: 327 -VACGEYHTCAVSTSGDLFTWGDGIHNVGLLGHGSDLSHWIPKRVSGPVEGLQVLSVACG 385

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
              +   T  G + T G    G LGHGD      PK +  L  +   +++A G  + +A+
Sbjct: 386 TWHSALATANGKLFTFGDGAFGVLGHGDRESVSYPKEVKMLSGL-KTLKVACGVWHTVAI 444

Query: 285 ----------TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 334
                     T +  ++++G G    LGHG +   L P  + +      +  +++ G   
Sbjct: 445 VEVMNQTGTSTSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFN--QIACGHTF 502

Query: 335 VVALDSSGYV 344
            VAL +SG+V
Sbjct: 503 TVALTTSGHV 512



 Score = 42.7 bits (99), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 38/165 (23%), Positives = 76/165 (46%), Gaps = 4/165 (2%)

Query: 182 GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 241
           G+V++ G +             +  P+ +E+   +   Q+  G+     +T +G V T  
Sbjct: 236 GEVWSDGISPDGVVNSTTVKIDVLIPKPLESNVVLDVHQIACGVRHIALVTRQGEVFTWE 295

Query: 242 SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC- 300
               G+LGHG  +D   PK +  L  + ++  +A G  +  AV+ +G ++++G G +   
Sbjct: 296 EEAGGRLGHGIQVDVCRPKLVEFL-ALTNIDFVACGEYHTCAVSTSGDLFTWGDGIHNVG 354

Query: 301 -LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            LGHG       P+ + +   +G+ V+ V+ G  H     ++G +
Sbjct: 355 LLGHGSDLSHWIPKRV-SGPVEGLQVLSVACGTWHSALATANGKL 398


>gi|302804628|ref|XP_002984066.1| hypothetical protein SELMODRAFT_40379 [Selaginella moellendorffii]
 gi|300148418|gb|EFJ15078.1| hypothetical protein SELMODRAFT_40379 [Selaginella moellendorffii]
          Length = 1023

 Score = 81.3 bits (199), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 68/212 (32%), Positives = 101/212 (47%), Gaps = 9/212 (4%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
           +FS G+     LG G    Q V   R+     A +V+VSA++ H+  V  SGQ+F+ G  
Sbjct: 129 LFSWGNGSNYQLGTGTAGIQRVP-CRVETLHGADIVRVSAAKFHSTAVNSSGQLFSWGYG 187

Query: 191 SSFCCGHRDTN--RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 248
                GH D +    +  PR V  L G   K V A  + T   T  G V+T G+N  GQL
Sbjct: 188 RGGRLGHEDYSGEVAVIAPRQVTGLCGRRVKNVAAAKHHTIVATEGGEVYTWGTNREGQL 247

Query: 249 GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD 308
           G+     + TP+ ++ L     VV++AA   +  AVT +G VY++G   +  LG+G  + 
Sbjct: 248 GYPAVDTQSTPRRVSTLR--AKVVEVAAANKHSAAVTESGEVYTWGCNKDGQLGYGTSNS 305

Query: 309 ELQ--PRAIQTFRRKGIHVVRVSAGDEHVVAL 338
                PR +     KG   + +SA   H V +
Sbjct: 306 ASNCVPRVVDYL--KGRKALAISAAKRHTVVI 335



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 67/237 (28%), Positives = 107/237 (45%), Gaps = 26/237 (10%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +   ++HT++ +    V++ G++  G LG+    TQ  S  R      A VV+V+A+  H
Sbjct: 220 VAAAKHHTIVATEGGEVYTWGTNREGQLGYPAVDTQ--STPRRVSTLRAKVVEVAAANKH 277

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           +A V +SG+V+T G N     G+  +N      PR+V+ LKG     ++A    T  + +
Sbjct: 278 SAAVTESGEVYTWGCNKDGQLGYGTSNSASNCVPRVVDYLKGRKALAISAAKRHT-VVIV 336

Query: 234 RGHVHTCGSNTHGQLGHGDT-LDRPTPKSIA-PLE----EVGSVVQIAAGPSYMLAVTGN 287
              V T G   H  +      L R T K+   PL+    E   +V +AAG  +  A+  +
Sbjct: 337 ETEVFTWG---HKMVSPRRVVLVRNTKKAGQHPLKFHLSERLHIVAVAAGVVHSTAIAAD 393

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G+++S+ S             + Q  A Q     G H V VSAG        S+G V
Sbjct: 394 GLIFSWLSA------------DPQLHAQQVLTMTGHHAVSVSAGKYRTAVATSTGDV 438



 Score = 39.7 bits (91), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 55/110 (50%), Gaps = 9/110 (8%)

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           GH+   G+   G  G   +LD    K   P++ V   V+ A  PS  + +     ++S+G
Sbjct: 81  GHLAVAGALVDG--GASVSLD--DSKGRLPVDLVSGPVKQAVAPSCRVVLKE---LFSWG 133

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           +GSN+ LG G    +  P  ++T    G  +VRVSA   H  A++SSG +
Sbjct: 134 NGSNYQLGTGTAGIQRVPCRVETLH--GADIVRVSAAKFHSTAVNSSGQL 181


>gi|255544003|ref|XP_002513064.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223548075|gb|EEF49567.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1096

 Score = 81.3 bits (199), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 53/177 (29%), Positives = 91/177 (51%), Gaps = 7/177 (3%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  ++    HAA V + G+VF+ G+      GH   +  +  P+LV+ LK    + V  G
Sbjct: 307 VQTIACGRRHAALVTKQGEVFSWGEELGGRLGH-GVDSDVLHPKLVDGLKNTNVELVACG 365

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYM 281
              +  +T+ G ++T G ++H  G LG+ +      PK +  PLE +  V  ++ GP + 
Sbjct: 366 EYHSCAVTLSGDLYTWGGSSHNCGLLGYRNEASNWVPKKLNGPLEGI-HVAAVSCGPWHT 424

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             VT +G +++FG G+   LGHG++     PR +++   KG+  VR + G  H  A+
Sbjct: 425 AVVTSSGQLFTFGDGTFGVLGHGDRRSVSTPREVESL--KGLRTVRAACGVWHTAAV 479



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 69/244 (28%), Positives = 110/244 (45%), Gaps = 19/244 (7%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  GR H  L++    VFS G  L G LGHG + +  +    ++     +V  V+  E H
Sbjct: 310 IACGRRHAALVTKQGEVFSWGEELGGRLGHGVD-SDVLHPKLVDGLKNTNVELVACGEYH 368

Query: 175 AAFVLQSGQVFTCGDNSSFC--CGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           +  V  SG ++T G +S  C   G+R+        +L   L+G+    V+ G   T  +T
Sbjct: 369 SCAVTLSGDLYTWGGSSHNCGLLGYRNEASNWVPKKLNGPLEGIHVAAVSCGPWHTAVVT 428

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT------- 285
             G + T G  T G LGHGD     TP+ +  L+ +   V+ A G  +  AV        
Sbjct: 429 SSGQLFTFGDGTFGVLGHGDRRSVSTPREVESLKGL-RTVRAACGVWHTAAVVEVMVGSS 487

Query: 286 -----GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
                 +G ++++G G    LGHG++   L P  +        +  +V+ G    VAL +
Sbjct: 488 SSSNCSSGKLFTWGDGDKGRLGHGDKESRLVPTCVAALVEP--NFCQVACGHSMTVALTT 545

Query: 341 SGYV 344
           +G+V
Sbjct: 546 TGHV 549



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 102/225 (45%), Gaps = 18/225 (8%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           ++ G +HT ++++S  +F+ G    GVLGHG    + VS  R +        V+ +    
Sbjct: 417 VSCGPWHTAVVTSSGQLFTFGDGTFGVLGHG--DRRSVSTPREVESLKGLRTVRAACGVW 474

Query: 174 HAAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
           H A V++            SG++FT GD      GH D    +  P  V AL      QV
Sbjct: 475 HTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKESRLV-PTCVAALVEPNFCQV 533

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
             G + T  LT  GHV+T GS  +GQLG+    D   P  +        V ++  G  ++
Sbjct: 534 ACGHSMTVALTTTGHVYTMGSPVYGQLGNPQA-DGKLPVRVEGKLSKNFVEELDCGAYHV 592

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
             +T    VY++G G+N  LGHG+  D   P  ++  + K +  V
Sbjct: 593 AVLTSRTEVYTWGKGANGRLGHGDTDDRSSPTIVEALKDKQVKSV 637



 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 85/200 (42%), Gaps = 24/200 (12%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQC 151
           R +R    V H++ +VE       +  G   +   S+  +F+ G    G LGHG + ++ 
Sbjct: 465 RTVRAACGVWHTAAVVE-------VMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKESRL 517

Query: 152 V-----SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH--RDTNRPI 204
           V     +    NF       QV+   +    +  +G V+T G       G+   D   P+
Sbjct: 518 VPTCVAALVEPNF------CQVACGHSMTVALTTTGHVYTMGSPVYGQLGNPQADGKLPV 571

Query: 205 FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
              R+   L     +++  G      LT R  V+T G   +G+LGHGDT DR +P  +  
Sbjct: 572 ---RVEGKLSKNFVEELDCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRSSPTIVEA 628

Query: 265 LEEVGSVVQIAAGPSYMLAV 284
           L++   V  +  G S+  A+
Sbjct: 629 LKD-KQVKSVVCGTSFTAAI 647


>gi|442629373|ref|NP_001261249.1| CG9153, isoform C [Drosophila melanogaster]
 gi|323301230|gb|ADX35957.1| LD13353p [Drosophila melanogaster]
 gi|440215116|gb|AGB93944.1| CG9153, isoform C [Drosophila melanogaster]
          Length = 1062

 Score = 80.9 bits (198), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 69/208 (33%), Positives = 107/208 (51%), Gaps = 10/208 (4%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLG-HGP-ETTQCVSFTRINFPSAAHVVQVSA 170
           +QI  G  H+L L S   ++S GS++ G LG + P + T C    R+       +  ++ 
Sbjct: 151 VQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIAC 210

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
             NH+  + +SG VF  G N+    G  D TNR    P  ++ L+ +  + V  G  F+ 
Sbjct: 211 GGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRSY--PTQLKTLRTLGVRFVACGDEFSV 268

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGN 287
           FLT  G V TCG+  +GQLGHG + +   P+ +  +E +GS + Q+A G  + LA V   
Sbjct: 269 FLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMV--MELMGSTITQVACGNRHTLALVPSR 326

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAI 315
           G VY+FG GS+  LG       + P+ +
Sbjct: 327 GRVYAFGLGSSGQLGTRSTKSLMLPQVV 354



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 68/241 (28%), Positives = 108/241 (44%), Gaps = 13/241 (5%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH--VVQVSAS 171
           Q+  G  HTL ++ +  V++CGS+    LGH   T +      +  P      ++Q+   
Sbjct: 44  QVACGHRHTLFLTATGKVYACGSNDYSQLGHDLPTKRPRMSPFLLIPELQDYVIIQICCG 103

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H+  +   GQV + GDN     GH      +  P++V  L      Q+  G N +  L
Sbjct: 104 SRHSLALSDWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLAL 163

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRP---TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
           T  G +++ GSN +GQLG     D      P  +  L  +  +  IA G ++   ++ +G
Sbjct: 164 TSCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGI-PLAAIACGGNHSFLISKSG 222

Query: 289 VVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSL 346
            V  FG G N C  LG  ++ +   P  ++T R  G+    V+ GDE  V L + G V  
Sbjct: 223 AV--FGWGRNNCGQLGLNDETNRSYPTQLKTLRTLGVRF--VACGDEFSVFLTNEGGVFT 278

Query: 347 C 347
           C
Sbjct: 279 C 279



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 71/232 (30%), Positives = 104/232 (44%), Gaps = 20/232 (8%)

Query: 125 LISNSSVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 183
           + S   ++  GS+  G LG G  E  Q ++ ++I +     V QV+    H  F+  +G+
Sbjct: 1   MASGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGK 60

Query: 184 VFTCGDNSSFCCGHR-DTNRPIFRP-RLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 241
           V+ CG N     GH   T RP   P  L+  L+     Q+  G   +  L+  G V + G
Sbjct: 61  VYACGSNDYSQLGHDLPTKRPRMSPFLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWG 120

Query: 242 SNTHGQLGHGDTLDRPTPKSIAPLEEV------GSVVQIAAGPSYMLAVTGNGVVYSFGS 295
            N  GQLGH       T K I  L +V       +VVQIA G ++ LA+T  G +YS+GS
Sbjct: 121 DNDCGQLGHA------TDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGS 174

Query: 296 GSNFCLGHGEQHDELQ---PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
                LG    +D      P  + T    GI +  ++ G  H   +  SG V
Sbjct: 175 NIYGQLGVNSPNDLTHCNYPLRLTTLL--GIPLAAIACGGNHSFLISKSGAV 224


>gi|302753302|ref|XP_002960075.1| hypothetical protein SELMODRAFT_163545 [Selaginella moellendorffii]
 gi|300171014|gb|EFJ37614.1| hypothetical protein SELMODRAFT_163545 [Selaginella moellendorffii]
          Length = 1051

 Score = 80.9 bits (198), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 68/212 (32%), Positives = 101/212 (47%), Gaps = 9/212 (4%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
           +FS G+     LG G    Q V   R+     A +V+VSA++ H+  V  SGQ+F+ G  
Sbjct: 150 LFSWGNGSNYQLGTGSAGIQRVP-CRVETLHGADIVRVSAAKFHSTAVNSSGQLFSWGYG 208

Query: 191 SSFCCGHRDTNRPI--FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 248
                GH D +  +    PR V  L G   K V A  + T   T  G V+T G+N  GQL
Sbjct: 209 RGGRLGHEDYSGEVAVIAPRQVTGLCGRRVKNVAAAKHHTIVATEGGEVYTWGTNREGQL 268

Query: 249 GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD 308
           G+     + TP+ ++ L     VV++AA   +  AVT +G VY++G   +  LG+G  + 
Sbjct: 269 GYPAVDTQSTPRRVSTLR--AKVVEVAAANKHSAAVTESGEVYTWGCNKDGQLGYGTSNS 326

Query: 309 ELQ--PRAIQTFRRKGIHVVRVSAGDEHVVAL 338
                PR +     KG   + +SA   H V +
Sbjct: 327 ASNCVPRVVDYL--KGRKALTISAAKRHTVVI 356



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 107/237 (45%), Gaps = 26/237 (10%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +   ++HT++ +    V++ G++  G LG+    TQ  S  R      A VV+V+A+  H
Sbjct: 241 VAAAKHHTIVATEGGEVYTWGTNREGQLGYPAVDTQ--STPRRVSTLRAKVVEVAAANKH 298

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           +A V +SG+V+T G N     G+  +N      PR+V+ LKG     ++A    T  + +
Sbjct: 299 SAAVTESGEVYTWGCNKDGQLGYGTSNSASNCVPRVVDYLKGRKALTISAAKRHT-VVIV 357

Query: 234 RGHVHTCGSNTHGQLGHGDT-LDRPTPKSIA-PLE----EVGSVVQIAAGPSYMLAVTGN 287
              V T G   H  +      L R T K+   PL+    E   +V +AAG  +  A+  +
Sbjct: 358 ETEVFTWG---HKMVSPRRVVLVRNTKKAGQHPLKFHLSERLHIVAVAAGVVHSTAIAAD 414

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G+++S+ S             + Q  A Q     G H + VSAG        S+G V
Sbjct: 415 GLIFSWLSA------------DPQLHAQQVLTMTGHHALSVSAGKYRTAVATSTGDV 459



 Score = 38.9 bits (89), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 55/110 (50%), Gaps = 9/110 (8%)

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           GH+   G+   G  G   +LD    K   P++ V   V+ A  PS  + +     ++S+G
Sbjct: 102 GHLAVAGALVDG--GASVSLD--DSKGRLPVDLVSGPVKQAVTPSCRVVLKE---LFSWG 154

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           +GSN+ LG G    +  P  ++T    G  +VRVSA   H  A++SSG +
Sbjct: 155 NGSNYQLGTGSAGIQRVPCRVETLH--GADIVRVSAAKFHSTAVNSSGQL 202


>gi|261405028|ref|YP_003241269.1| hypothetical protein GYMC10_1173 [Paenibacillus sp. Y412MC10]
 gi|261281491|gb|ACX63462.1| Listeria/Bacterioides repeat protein [Paenibacillus sp. Y412MC10]
          Length = 1280

 Score = 80.9 bits (198), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 71/232 (30%), Positives = 110/232 (47%), Gaps = 15/232 (6%)

Query: 115 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           +I  G YHT  L+S+  V+S G    G LG G   T+       N     HV+ + +   
Sbjct: 37  KIVAGYYHTASLVSSGEVYSWGYGDRGQLGDGTWNTRTTPVMAKNL---NHVIDIHSGVR 93

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF-LT 232
            +  + Q G V+T G N +   G   T   +  P  V  L G+  K ++ GL + G  L+
Sbjct: 94  SSMALRQDGTVWTWGANENGQLG-IGTITNVNAPAQVPGLSGI--KAISGGLAYHGMALS 150

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G V T G N +G+LG+G T+ + +P  +A L +V +   IAAG  Y LA+  +G V++
Sbjct: 151 ENGTVWTWGKNDNGELGNGTTIQQNSPVLVAGLSDVTA---IAAGGYYSLALKSDGTVWA 207

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           +G   +  LG G   D   P  +         V+ ++AG  H +A+   G V
Sbjct: 208 WGVNGSGELGDGTTTDRHVPVQVAGL----TDVMAIAAGGSHSLAIKQDGTV 255



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 64/226 (28%), Positives = 98/226 (43%), Gaps = 16/226 (7%)

Query: 121 YHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           YH + +S N +V++ G +  G LG+G    Q    + +     + V  ++A   ++  + 
Sbjct: 144 YHGMALSENGTVWTWGKNDNGELGNGTTIQQN---SPVLVAGLSDVTAIAAGGYYSLALK 200

Query: 180 QSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
             G V+  G N S   G    T+R +  P  V  L  V    + AG + +  +   G V 
Sbjct: 201 SDGTVWAWGVNGSGELGDGTTTDRHV--PVQVAGLTDV--MAIAAGGSHSLAIKQDGTVW 256

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
             G+NT+G LG G    R  P  +  L+ +   V +A G  + LAV   G V+S+G  S 
Sbjct: 257 AWGNNTYGTLGDGTRTHRTRPVQVRNLQHI---VAVAGGGYHSLAVDRAGNVWSWGDNSQ 313

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             LG       L P  +        HV  +SAG  H VA+   G V
Sbjct: 314 QQLGLNSNASSLIPVPVPGIE----HVREISAGGFHSVAMKKDGTV 355



 Score = 49.3 bits (116), Expect = 0.003,   Method: Composition-based stats.
 Identities = 61/243 (25%), Positives = 103/243 (42%), Gaps = 26/243 (10%)

Query: 104 SDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA 163
           SD+   +AG      G Y   L S+ +V++ G +  G LG G  T + V    +      
Sbjct: 184 SDVTAIAAG------GYYSLALKSDGTVWAWGVNGSGELGDGTTTDRHVP---VQVAGLT 234

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVT 222
            V+ ++A  +H+  + Q G V+  G+N+    G    T+R   RP  V  L+ +      
Sbjct: 235 DVMAIAAGGSHSLAIKQDGTVWAWGNNTYGTLGDGTRTHRT--RPVQVRNLQHI---VAV 289

Query: 223 AGLNFTGFLTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
           AG  +      R G+V + G N+  QLG         P    P+  +  V +I+AG  + 
Sbjct: 290 AGGGYHSLAVDRAGNVWSWGDNSQQQLGLNSNASSLIP---VPVPGIEHVREISAGGFHS 346

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG----DEHVVA 337
           +A+  +G V+ +G  S   +G G  ++    R I T  +  +       G    + H + 
Sbjct: 347 VAMKKDGTVWGWGYNSGGQIGDGTYNNT---RGIPTLTKAVLDTTSPDTGSGSLNPHSIT 403

Query: 338 LDS 340
            DS
Sbjct: 404 SDS 406


>gi|24655113|ref|NP_728591.1| CG9153, isoform A [Drosophila melanogaster]
 gi|24655115|ref|NP_612098.2| CG9153, isoform B [Drosophila melanogaster]
 gi|23092754|gb|AAF47474.2| CG9153, isoform A [Drosophila melanogaster]
 gi|23092755|gb|AAF47475.2| CG9153, isoform B [Drosophila melanogaster]
          Length = 1058

 Score = 80.9 bits (198), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 69/208 (33%), Positives = 107/208 (51%), Gaps = 10/208 (4%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLG-HGP-ETTQCVSFTRINFPSAAHVVQVSA 170
           +QI  G  H+L L S   ++S GS++ G LG + P + T C    R+       +  ++ 
Sbjct: 146 VQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIAC 205

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
             NH+  + +SG VF  G N+    G  D TNR    P  ++ L+ +  + V  G  F+ 
Sbjct: 206 GGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRSY--PTQLKTLRTLGVRFVACGDEFSV 263

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGN 287
           FLT  G V TCG+  +GQLGHG + +   P+ +  +E +GS + Q+A G  + LA V   
Sbjct: 264 FLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMV--MELMGSTITQVACGNRHTLALVPSR 321

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAI 315
           G VY+FG GS+  LG       + P+ +
Sbjct: 322 GRVYAFGLGSSGQLGTRSTKSLMLPQVV 349



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 70/230 (30%), Positives = 104/230 (45%), Gaps = 21/230 (9%)

Query: 125 LISNSSVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 183
           + S   ++  GS+  G LG G  E  Q ++ ++I +     V QV+    H  F+  +G+
Sbjct: 1   MASGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGK 60

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           V+ CG N     GH   + P  RP L+  L+     Q+  G   +  L+  G V + G N
Sbjct: 61  VYACGSNDYSQLGH---DLPTKRPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDN 117

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEV------GSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
             GQLGH       T K I  L +V       +VVQIA G ++ LA+T  G +YS+GS  
Sbjct: 118 DCGQLGHA------TDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNI 171

Query: 298 NFCLGHGEQHDELQ---PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              LG    +D      P  + T    GI +  ++ G  H   +  SG V
Sbjct: 172 YGQLGVNSPNDLTHCNYPLRLTTLL--GIPLAAIACGGNHSFLISKSGAV 219



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 67/239 (28%), Positives = 108/239 (45%), Gaps = 14/239 (5%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+  G  HTL ++ +  V++CGS+    LGH   T + +    +       ++Q+     
Sbjct: 44  QVACGHRHTLFLTATGKVYACGSNDYSQLGHDLPTKRPLLIPELQ---DYVIIQICCGSR 100

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  +   GQV + GDN     GH      +  P++V  L      Q+  G N +  LT 
Sbjct: 101 HSLALSDWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTS 160

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRP---TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            G +++ GSN +GQLG     D      P  +  L  +  +  IA G ++   ++ +G V
Sbjct: 161 CGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGI-PLAAIACGGNHSFLISKSGAV 219

Query: 291 YSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSLC 347
             FG G N C  LG  ++ +   P  ++T R  G+    V+ GDE  V L + G V  C
Sbjct: 220 --FGWGRNNCGQLGLNDETNRSYPTQLKTLRTLGVRF--VACGDEFSVFLTNEGGVFTC 274


>gi|209878252|ref|XP_002140567.1| regulator of chromosome condensation family protein
           [Cryptosporidium muris RN66]
 gi|209556173|gb|EEA06218.1| regulator of chromosome condensation family protein
           [Cryptosporidium muris RN66]
          Length = 477

 Score = 80.9 bits (198), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 76/237 (32%), Positives = 112/237 (47%), Gaps = 13/237 (5%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           ++  G +H+ +I++S  +   G   CG LG G    + +   R+   S  +V+ VS S+ 
Sbjct: 46  EVCCGGHHSAVITHSGELIVWGYGGCGQLGLGD--LKDIVIPRV-MTSIKNVINVSCSDR 102

Query: 174 HAAFVLQSGQVFTCGDNSSFCCG-----HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
           H+A +L+ G+++T G N S   G         N  I  P+LVE L      +V+ G   T
Sbjct: 103 HSAAILEDGRLYTWGCNKSGKLGIGSLNVNLNNNIICTPQLVEKLLNEKVIKVSCGSFHT 162

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
             LT     +T G    G+LGHGDT D  TPK I  L  + SV  I  G  +   +  NG
Sbjct: 163 ACLTDLNKAYTWGLGMQGRLGHGDTNDVYTPKLIESLAGL-SVKNIVCGGHHTAILLNNG 221

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQ-TFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            VY  G G+   LG G + D   P+ +Q +   K I    VS G +H   + + G V
Sbjct: 222 KVYFCGGGAFGKLGFGSKEDIYIPKLLQGSLTNKSIK--EVSLGYQHSAVITTKGKV 276



 Score = 79.0 bits (193), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 86/183 (46%), Gaps = 8/183 (4%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V++VS    H A +    + +T G       GH DTN  ++ P+L+E+L G+  K +  G
Sbjct: 152 VIKVSCGSFHTACLTDLNKAYTWGLGMQGRLGHGDTN-DVYTPKLIESLAGLSVKNIVCG 210

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
            + T  L   G V+ CG    G+LG G   D   PK +       S+ +++ G  +   +
Sbjct: 211 GHHTAILLNNGKVYFCGGGAFGKLGFGSKEDIYIPKLLQGSLTNKSIKEVSLGYQHSAVI 270

Query: 285 TGNGVVYSFGSGSNFCLGH---GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           T  G VY++G G    LGH   G + D L P+ ++      I  V +S G  H V + + 
Sbjct: 271 TTKGKVYTWGQGGR--LGHIYNGPEPDILSPKLVEKLNS--IIAVNISCGHSHTVVISNI 326

Query: 342 GYV 344
           G V
Sbjct: 327 GDV 329



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/187 (24%), Positives = 88/187 (47%), Gaps = 5/187 (2%)

Query: 102 HSSDIVETSAG--NMQITTGRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRIN 158
           ++  ++E+ AG     I  G +HT +L++N  V+ CG    G LG G +    +      
Sbjct: 191 YTPKLIESLAGLSVKNIVCGGHHTAILLNNGKVYFCGGGAFGKLGFGSKEDIYIPKLLQG 250

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
             +   + +VS    H+A +   G+V+T G        +      I  P+LVE L  +  
Sbjct: 251 SLTNKSIKEVSLGYQHSAVITTKGKVYTWGQGGRLGHIYNGPEPDILSPKLVEKLNSIIA 310

Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
             ++ G + T  ++  G V+  G   +  LGHG    +P   ++ P+ +  ++VQ++ G 
Sbjct: 311 VNISCGHSHTVVISNIGDVYAWGVTRN--LGHGVIDSKPNDPTLHPILQNKNIVQVSCGK 368

Query: 279 SYMLAVT 285
           ++ +A++
Sbjct: 369 THTIALS 375



 Score = 37.7 bits (86), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 34/141 (24%), Positives = 64/141 (45%), Gaps = 12/141 (8%)

Query: 205 FRPRLVEALKGVP-CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
             P+L+E+L      K+V  G + +  +T  G +   G    GQLG GD  D   P+ + 
Sbjct: 30  IEPKLIESLYSFNRIKEVCCGGHHSAVITHSGELIVWGYGGCGQLGLGDLKDIVIPRVMT 89

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ------PRAIQT 317
            ++   +V+ ++    +  A+  +G +Y++G   +  LG G  +  L       P+ ++ 
Sbjct: 90  SIK---NVINVSCSDRHSAAILEDGRLYTWGCNKSGKLGIGSLNVNLNNNIICTPQLVEK 146

Query: 318 FRRKGIHVVRVSAGDEHVVAL 338
              +   V++VS G  H   L
Sbjct: 147 LLNE--KVIKVSCGSFHTACL 165


>gi|21711763|gb|AAM75072.1| RE53774p [Drosophila melanogaster]
          Length = 1058

 Score = 80.9 bits (198), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 69/208 (33%), Positives = 107/208 (51%), Gaps = 10/208 (4%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLG-HGP-ETTQCVSFTRINFPSAAHVVQVSA 170
           +QI  G  H+L L S   ++S GS++ G LG + P + T C    R+       +  ++ 
Sbjct: 146 VQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIAC 205

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
             NH+  + +SG VF  G N+    G  D TNR    P  ++ L+ +  + V  G  F+ 
Sbjct: 206 GGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRSY--PTQLKTLRTLGVRFVACGDEFSV 263

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGN 287
           FLT  G V TCG+  +GQLGHG + +   P+ +  +E +GS + Q+A G  + LA V   
Sbjct: 264 FLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMV--MELMGSTITQVACGNRHTLALVPSR 321

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAI 315
           G VY+FG GS+  LG       + P+ +
Sbjct: 322 GRVYAFGLGSSGQLGTRSTKSLMLPQVV 349



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 70/230 (30%), Positives = 104/230 (45%), Gaps = 21/230 (9%)

Query: 125 LISNSSVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 183
           + S   ++  GS+  G LG G  E  Q ++ ++I +     V QV+    H  F+  +G+
Sbjct: 1   MASGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGK 60

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           V+ CG N     GH   + P  RP L+  L+     Q+  G   +  L+  G V + G N
Sbjct: 61  VYACGSNDYSQLGH---DLPTKRPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDN 117

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEV------GSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
             GQLGH       T K I  L +V       +VVQIA G ++ LA+T  G +YS+GS  
Sbjct: 118 DCGQLGHA------TDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNI 171

Query: 298 NFCLGHGEQHDELQ---PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              LG    +D      P  + T    GI +  ++ G  H   +  SG V
Sbjct: 172 YGQLGVNSPNDLTHCNYPLRLTTLL--GIPLAAIACGGNHSFLISKSGAV 219



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 67/239 (28%), Positives = 108/239 (45%), Gaps = 14/239 (5%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+  G  HTL ++ +  V++CGS+    LGH   T + +    +       ++Q+     
Sbjct: 44  QVACGHRHTLFLTATGKVYACGSNDYSQLGHDLPTKRPLLIPELQ---DYVIIQICCGSR 100

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  +   GQV + GDN     GH      +  P++V  L      Q+  G N +  LT 
Sbjct: 101 HSLALSDWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTS 160

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRP---TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            G +++ GSN +GQLG     D      P  +  L  +  +  IA G ++   ++ +G V
Sbjct: 161 CGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGI-PLAAIACGGNHSFLISKSGAV 219

Query: 291 YSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSLC 347
             FG G N C  LG  ++ +   P  ++T R  G+    V+ GDE  V L + G V  C
Sbjct: 220 --FGWGRNNCGQLGLNDETNRSYPTQLKTLRTLGVRF--VACGDEFSVFLTNEGGVFTC 274


>gi|408500684|ref|YP_006864603.1| RCC1 domain-containing protein [Bifidobacterium asteroides PRL2011]
 gi|408465508|gb|AFU71037.1| RCC1 domain-containing protein [Bifidobacterium asteroides PRL2011]
          Length = 1173

 Score = 80.9 bits (198), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 62/206 (30%), Positives = 100/206 (48%), Gaps = 9/206 (4%)

Query: 144 HGPETT-QCVSFTRINFPSAAHVVQVSASEN---HAAFVLQSGQVFTCGDNSSFCCGHRD 199
           +GPE+  Q V+ T    P  A  +++S ++    H+A V   G ++T GDNS    G   
Sbjct: 689 NGPESGGQTVTLT----PPPARGIRISQADGGDLHSAAVGSDGSLYTWGDNSHGQLGRDT 744

Query: 200 TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP 259
            ++P   P   EA  GV    V+AG  F+  L   G +++ G N+ GQLG   T + P  
Sbjct: 745 ADKPDSHPSKAEAPAGVTFVHVSAGYGFSVALASDGSLYSWGDNSRGQLGRTVTSNNPAN 804

Query: 260 KSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 318
           +        G + VQ +AG S+++A++ +G +Y++G  S   LG     +    +  +  
Sbjct: 805 RPHKVEAPAGITFVQASAGGSHVVALSSDGNIYTWGDNSAGQLGRTVTSNNPADKPGKAD 864

Query: 319 RRKGIHVVRVSAGDEHVVALDSSGYV 344
               +    VSAG  H VA+D+ G V
Sbjct: 865 TPADVTFTSVSAGQGHTVAVDTQGDV 890



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 54/189 (28%), Positives = 89/189 (47%), Gaps = 12/189 (6%)

Query: 116  ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            ++ G+ HT+ + +   V++ G +  G LG    +T      + + P+     Q SA E+H
Sbjct: 874  VSAGQGHTVAVDTQGDVYTWGDNTHGELGRSTTSTPADKPGKADTPAGITFTQASAGESH 933

Query: 175  AAFVLQSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
            +  V   G ++T GD ++   G RDTN  P  +P   +   GV   Q +AG   +  L  
Sbjct: 934  SVAVSDDGSIYTWGDTANGRLG-RDTNITPADKPGKADTPAGVTFTQASAGGKHSIALGS 992

Query: 234  RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
             G ++T G +     G  + +D  TP  I       +  Q +AG SY LA+  +G +YS+
Sbjct: 993  DGSLYTWGDSGKTSAGRPNKVD--TPAGI-------TFTQASAGASYCLALGSDGNLYSW 1043

Query: 294  GSGSNFCLG 302
            G  +   LG
Sbjct: 1044 GDNAKGQLG 1052



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 63/241 (26%), Positives = 106/241 (43%), Gaps = 16/241 (6%)

Query: 107  VETSAG--NMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFT-RINFPSA 162
            VE  AG   +Q + G  H + L S+ ++++ G +  G LG    +        + + P+ 
Sbjct: 809  VEAPAGITFVQASAGGSHVVALSSDGNIYTWGDNSAGQLGRTVTSNNPADKPGKADTPAD 868

Query: 163  AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
                 VSA + H   V   G V+T GDN+    G   T+ P  +P   +   G+   Q +
Sbjct: 869  VTFTSVSAGQGHTVAVDTQGDVYTWGDNTHGELGRSTTSTPADKPGKADTPAGITFTQAS 928

Query: 223  AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYM 281
            AG + +  ++  G ++T G   +G+LG  DT   P  K        G +  Q +AG  + 
Sbjct: 929  AGESHSVAVSDDGSIYTWGDTANGRLGR-DTNITPADKPGKADTPAGVTFTQASAGGKHS 987

Query: 282  LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
            +A+  +G +Y++G       G        +P  + T    GI   + SAG  + +AL S 
Sbjct: 988  IALGSDGSLYTWGDSGKTSAG--------RPNKVDT--PAGITFTQASAGASYCLALGSD 1037

Query: 342  G 342
            G
Sbjct: 1038 G 1038



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 41/155 (26%), Positives = 72/155 (46%), Gaps = 9/155 (5%)

Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-------RDTNRPIFRPRL 209
           +N P+  H  QVS    H   +   G +++ G+N+    G        +D  +   +P+L
Sbjct: 212 VNPPTGVHFTQVSTGYTHFLAIGSDGNLYSWGNNADGELGRETVSTTPKDNPQIDNQPKL 271

Query: 210 VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH--GDTLDRPTPKSIAPLEE 267
           V    GV   Q  AG   +  L   G++++ G N +G+LG   G  +    P  +   + 
Sbjct: 272 VTPPAGVHFTQACAGKWHSLALGSDGNLYSWGENKYGELGRDTGSAIYDVKPGKVNLPKG 331

Query: 268 VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
           +  + QI+AG  Y +A+  +G +YS+G  +   LG
Sbjct: 332 ITKITQISAGTFYSMALDSDGDLYSWGDNTYDELG 366



 Score = 54.3 bits (129), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 61/215 (28%), Positives = 92/215 (42%), Gaps = 26/215 (12%)

Query: 146 PETTQCVSFTRINF-----PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT 200
           P + +   +TRI       P       V A E  +  +   G ++  GDN+       D 
Sbjct: 146 PTSGKATEYTRITLTPPTTPDIRFSHIVPAKEEGSQAIASDGNLYRWGDNNYKLGTPEDE 205

Query: 201 NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRP- 257
            R    P LV    GV   QV+ G  +T FL I   G++++ G+N  G+LG       P 
Sbjct: 206 KRT---PSLVNPPTGVHFTQVSTG--YTHFLAIGSDGNLYSWGNNADGELGRETVSTTPK 260

Query: 258 -------TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH--GEQHD 308
                   PK + P   V    Q  AG  + LA+  +G +YS+G      LG   G    
Sbjct: 261 DNPQIDNQPKLVTPPAGV-HFTQACAGKWHSLALGSDGNLYSWGENKYGELGRDTGSAIY 319

Query: 309 ELQPRAIQTFRRKGI-HVVRVSAGDEHVVALDSSG 342
           +++P  +     KGI  + ++SAG  + +ALDS G
Sbjct: 320 DVKPGKVNL--PKGITKITQISAGTFYSMALDSDG 352



 Score = 51.2 bits (121), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 63/240 (26%), Positives = 106/240 (44%), Gaps = 15/240 (6%)

Query: 115 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETT-QCVSFTRINFPSA-AHVVQVSAS 171
           Q   G++H+L L S+ +++S G +  G LG    +    V   ++N P     + Q+SA 
Sbjct: 282 QACAGKWHSLALGSDGNLYSWGENKYGELGRDTGSAIYDVKPGKVNLPKGITKITQISAG 341

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR---PRLVEALKGVPCKQVTAGLNFT 228
             ++  +   G +++ GDN+    G      P FR   PR +    GV          +T
Sbjct: 342 TFYSMALDSDGDLYSWGDNTYDELGRYAGGYP-FRDRSPRKMTMPAGVKKFTWIKAGEWT 400

Query: 229 GFLTIR-GHVHTCGSNTHGQLGHGDTLDRP--TPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
              T   G +++ G N +GQLG      R   TP+ +     V    +++A   + LA+ 
Sbjct: 401 SLATSSDGSLYSWGWNEYGQLGRNTAPARQDRTPRKVTMPAGVTKFTKVSAEHRHSLALG 460

Query: 286 GNGVVYSFGSGSNFCLGH--GEQHDELQPRAIQTFRRKGI-HVVRVSAGDEHVVALDSSG 342
            +G +YS+G      LG   G    +++P  + T    G+     VSAG  H +A+ S G
Sbjct: 461 SDGNLYSWGLNDCKQLGRDTGSAKYDVKPGKVPT--PAGVAQFTEVSAGYSHSLAIGSDG 518


>gi|218188915|gb|EEC71342.1| hypothetical protein OsI_03406 [Oryza sativa Indica Group]
          Length = 848

 Score = 80.9 bits (198), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 108/229 (47%), Gaps = 16/229 (6%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + +  G +H+ L ++S  +++ G    GVLGHG   T       +   S    ++V+   
Sbjct: 366 LSVACGSWHSALTTSSGKLYTFGDGTFGVLGHGDRETLAYP-KEVEALSGFKTIKVACGI 424

Query: 173 NHAAFVLQ----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            H+A +++          S +++T GD      GH D   P   P+ V+AL      Q+ 
Sbjct: 425 WHSAAIVEVTNQTGANVMSKKLYTWGDGDKNRLGHGD-KEPRLVPKCVQALLEYDFHQLA 483

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
            G N T  L   G V T GS+++GQLG+  + D   P  +        V +I+ G S++ 
Sbjct: 484 CGHNMTVALATSGRVFTMGSSSNGQLGNPKS-DGKQPCLVQDRLASELVEEISCGASHVT 542

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
            +T    VY++G G+N  LGHG+  D  +P  ++  + +  HV  +S G
Sbjct: 543 VLTSRSEVYTWGMGANGRLGHGDLKDRKKPCLVEALKDR--HVKSISCG 589



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 73/253 (28%), Positives = 106/253 (41%), Gaps = 37/253 (14%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVV 166
           QI  G  H  L +    VF+ G    G LGHG       P+  + +S T ++        
Sbjct: 260 QIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDADISRPKLVESLSLTVVDL------- 312

Query: 167 QVSASENHAAFVLQSGQVFTCGDNSS----FCCGHRDTNRPIFRPRLVEA-LKGVPCKQV 221
            +S  E H   V  SG +F  GD S       CG   T    + P+ V   L+G+    V
Sbjct: 313 -ISCGEFHTCAVTTSGDLFNWGDGSYNVGLLGCG---TEVSYWLPKKVSGPLEGLQVLSV 368

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
             G   +   T  G ++T G  T G LGHGD      PK +  L      +++A G  + 
Sbjct: 369 ACGSWHSALTTSSGKLYTFGDGTFGVLGHGDRETLAYPKEVEALSGF-KTIKVACGIWHS 427

Query: 282 LAV------TGNGVV----YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
            A+      TG  V+    Y++G G    LGHG++   L P+ +Q       H  +++ G
Sbjct: 428 AAIVEVTNQTGANVMSKKLYTWGDGDKNRLGHGDKEPRLVPKCVQALLEYDFH--QLACG 485

Query: 332 DEHVVALDSSGYV 344
               VAL +SG V
Sbjct: 486 HNMTVALATSGRV 498



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 52/177 (29%), Positives = 86/177 (48%), Gaps = 7/177 (3%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++    H A   + G+VFT G+      GH  T+  I RP+LVE+L       ++ G
Sbjct: 258 VNQIACGTRHVALTTRQGEVFTWGEEFGGRLGH-GTDADISRPKLVESLSLTVVDLISCG 316

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
              T  +T  G +   G  ++  G LG G  +    PK ++ PLE +  V+ +A G  + 
Sbjct: 317 EFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWLPKKVSGPLEGL-QVLSVACGSWHS 375

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
              T +G +Y+FG G+   LGHG++     P+ ++     G   ++V+ G  H  A+
Sbjct: 376 ALTTSSGKLYTFGDGTFGVLGHGDRETLAYPKEVEAL--SGFKTIKVACGIWHSAAI 430



 Score = 47.4 bits (111), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 65/141 (46%), Gaps = 4/141 (2%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  P+ +E+   +   Q+  G       T +G V T G    G+LGHG   D   PK + 
Sbjct: 244 VLIPKPLESDVVLDVNQIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDADISRPKLVE 303

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRK 321
            L  +  V  I+ G  +  AVT +G ++++G GS     LG G +     P+ + +   +
Sbjct: 304 SL-SLTVVDLISCGEFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWLPKKV-SGPLE 361

Query: 322 GIHVVRVSAGDEHVVALDSSG 342
           G+ V+ V+ G  H     SSG
Sbjct: 362 GLQVLSVACGSWHSALTTSSG 382


>gi|149043901|gb|EDL97352.1| rCG61079, isoform CRA_a [Rattus norvegicus]
          Length = 546

 Score = 80.9 bits (198), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 72/229 (31%), Positives = 109/229 (47%), Gaps = 11/229 (4%)

Query: 91  KRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETT 149
           +  +R  ++++  SDI       +Q+  G YH+L +S +S VF  G +  G LG G E  
Sbjct: 122 EECIRVPRNIKSLSDIQI-----VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQ 176

Query: 150 QCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRL 209
           +  S   I        +QV+A   H+  +  SG +F  G N     G  D N   + P L
Sbjct: 177 KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNL 235

Query: 210 VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 269
           +++L+      +  G + T  LT  G V T G+  +GQLGH  T     P+ +   E +G
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMG 293

Query: 270 SVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
           S+V QIA G  +  A V  +G +YSFG G N  LG G   +   P  ++
Sbjct: 294 SIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 107/226 (47%), Gaps = 7/226 (3%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G + +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G    + T P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIECQKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             LG  +++D   P  +++ R +   +V +  G++H  AL   G V
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQ--KIVYICCGEDHTAALTKEGGV 263



 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 87/191 (45%), Gaps = 8/191 (4%)

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           + +F     V  V     H  FVL  G V+TCG N     GH  + +   +P  V AL  
Sbjct: 27  KSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDA 83

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGDTLDRPTPKSIAPLEEVGSVVQI 274
                V+ G   T  L  +G V+  G ++ GQLG  G       P++I  L ++  +VQ+
Sbjct: 84  QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDI-QIVQV 142

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           A G  + LA++    V+ +G      LG G E   +  P+ I++    GI  ++V+AG  
Sbjct: 143 ACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLL--GIPFMQVAAGGA 200

Query: 334 HVVALDSSGYV 344
           H   L  SG +
Sbjct: 201 HSFVLTLSGAI 211



 Score = 61.2 bits (147), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 71/142 (50%), Gaps = 6/142 (4%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG-HGEQHDELQPRAIQTFRRKG 322
            L +  ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  AL-DAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSL--SD 136

Query: 323 IHVVRVSAGDEHVVALDSSGYV 344
           I +V+V+ G  H +AL  +  V
Sbjct: 137 IQIVQVACGYYHSLALSKASEV 158


>gi|159037172|ref|YP_001536425.1| chromosome condensation regulator RCC1 [Salinispora arenicola
           CNS-205]
 gi|157916007|gb|ABV97434.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
           CNS-205]
          Length = 560

 Score = 80.9 bits (198), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 70/222 (31%), Positives = 104/222 (46%), Gaps = 13/222 (5%)

Query: 122 HTLLISNS-SVFSCGSSLCGVLGHG---PETTQCVSFTRINFPSAAHVVQVSASENHAAF 177
           H+L ++++ +V + G +  G LG G   P  T  V    ++ PS      V+  + H+  
Sbjct: 204 HSLAVTSAGTVLAWGDNASGQLGEGTTIPSRTPVV----VSLPSGVTATAVAGGDLHSLA 259

Query: 178 VLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
           V  +G V   G NSS   G   T +R    P  V    G     V AG+ F+  L+  G 
Sbjct: 260 VTSAGAVLAWGSNSSGQLGDGTTADR--STPVAVSLSGGTTVTAVAAGIAFSLALSSAGA 317

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           V   GSN+ GQLG G T DR TP +++      +V  IA G ++ LAVT  G   ++G+ 
Sbjct: 318 VLAWGSNSSGQLGDGTTADRSTPVTVSSPAGT-TVTAIAGGDAHGLAVTSVGAAIAWGNN 376

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           S   LG G   D + P A+         +  ++AG  H VA+
Sbjct: 377 SFGQLGDGTNTDRVTPVAVS-LPVGTTTLTAIAAGAAHSVAV 417



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 63/223 (28%), Positives = 94/223 (42%), Gaps = 13/223 (5%)

Query: 126 ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVF 185
           ++  +  + G +  G LG G  T        ++ P+   V  V+A   H   V  +G + 
Sbjct: 53  VAADTALAWGDNASGQLGDG-STADSSMPVAVSLPAGVTVTTVAAGAAHNLAVTSAGTIL 111

Query: 186 TCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF----LTIRGHVHTCG 241
             GDNSS   G   T+      R      G+P       +         LT  G V   G
Sbjct: 112 AWGDNSSGQLGDGTTSN-----RHTPVAVGLPTGVTVTAVAAGAAHSLALTSAGTVLAWG 166

Query: 242 SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 301
           +NT GQLG G T+D P P  +  L    +   +AAG ++ LAVT  G V ++G  ++  L
Sbjct: 167 ANTIGQLGDGTTIDSPAPVDVN-LPPGVTATAVAAGAAHSLAVTSAGTVLAWGDNASGQL 225

Query: 302 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G G       P  +      G+    V+ GD H +A+ S+G V
Sbjct: 226 GEGTTIPSRTPVVVS--LPSGVTATAVAGGDLHSLAVTSAGAV 266


>gi|403370898|gb|EJY85318.1| hypothetical protein OXYTRI_16821 [Oxytricha trifallax]
          Length = 821

 Score = 80.9 bits (198), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 73/265 (27%), Positives = 114/265 (43%), Gaps = 39/265 (14%)

Query: 116 ITTGRYHTLLISNSS--VFSCGSSLCGVLGHGPE----TTQCVSFTRINFPSAAHVVQVS 169
           ++ G  H+   SN S  V+  G  L G LG+  E      Q +   +I       V+Q+S
Sbjct: 165 LSCGTSHSFAWSNESGLVYGWGLGLNGRLGNENEGVVQEPQVLECLKIAMEIKMKVLQIS 224

Query: 170 ASENHAAFVLQ----------SGQVFTCGDNSSFCCGHRD----TNRPIFRPRLVEA--- 212
             ENH   ++Q            ++F  G+N     G  +     N  +   R +     
Sbjct: 225 CGENHTLALIQMPPQNEGETSQNKLFVWGNNDKLQLGMDNQADGNNEDMQSAREISVPHQ 284

Query: 213 LKGVPCKQVTAGLN-------------FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP 259
           L   P +  T   N             ++  LT  G+V+T GS   G+LG+ D   +P P
Sbjct: 285 LDPDPFQHDTDNKNYSNQLIGVHASYYYSAALTSNGNVYTWGSGEFGRLGYMDIKKQPQP 344

Query: 260 KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
           K +  L     V +I+ G  +  A+T  G V+S+G G N  LGHG   +E Q R +   +
Sbjct: 345 KVLKELTGF-QVTRISLGYYHGAAITEQGQVFSWGRGINGQLGHGSVLNEDQVRPVSALQ 403

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYV 344
              IH++ +S G+ H +AL + G V
Sbjct: 404 N--IHIIDISCGESHTLALTNKGEV 426



 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 91/181 (50%), Gaps = 5/181 (2%)

Query: 162 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
           +  ++ V AS  ++A +  +G V+T G       G+ D  +   +P++++ L G    ++
Sbjct: 300 SNQLIGVHASYYYSAALTSNGNVYTWGSGEFGRLGYMDIKKQP-QPKVLKELTGFQVTRI 358

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
           + G      +T +G V + G   +GQLGHG  L+    + ++ L+ +  ++ I+ G S+ 
Sbjct: 359 SLGYYHGAAITEQGQVFSWGRGINGQLGHGSVLNEDQVRPVSALQNI-HIIDISCGESHT 417

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           LA+T  G VYS+G G    LGHG+   +  P  +        ++ ++SAG  H  AL   
Sbjct: 418 LALTNKGEVYSWGGGQLGQLGHGDFLRQSLPIKVANLED---NIAQISAGKRHSSALTDD 474

Query: 342 G 342
           G
Sbjct: 475 G 475



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 59/188 (31%), Positives = 91/188 (48%), Gaps = 16/188 (8%)

Query: 121 YHTLLISNSSVFSCGSSLCGVLGH-----GPETTQCVSFTRINFPSAAHVVQVSASENHA 175
           Y   L SN +V++ GS   G LG+      P+       T         V ++S    H 
Sbjct: 312 YSAALTSNGNVYTWGSGEFGRLGYMDIKKQPQPKVLKELT------GFQVTRISLGYYHG 365

Query: 176 AFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           A + + GQVF+ G   +   GH    N    RP  V AL+ +    ++ G + T  LT +
Sbjct: 366 AAITEQGQVFSWGRGINGQLGHGSVLNEDQVRP--VSALQNIHIIDISCGESHTLALTNK 423

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G V++ G    GQLGHGD L +  P  +A LE+  ++ QI+AG  +  A+T +G ++++G
Sbjct: 424 GEVYSWGGGQLGQLGHGDFLRQSLPIKVANLED--NIAQISAGKRHSSALTDDGKLFTWG 481

Query: 295 SGSNFCLG 302
           S     LG
Sbjct: 482 SNEYGQLG 489



 Score = 39.7 bits (91), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 78/174 (44%), Gaps = 29/174 (16%)

Query: 188 GDNSSFCCGHRDTNRPIFR---PRLVEALKGVPCKQVTAGLNFTGFLTI--RGHVHTCGS 242
           G+NSS     R+  R + R   P  V AL+     QV  G + T  +T     HV + GS
Sbjct: 66  GNNSS---QQRNQQRGMIRDPRPERVLALEKYNINQVICGSDQTFCITKSPENHVFSWGS 122

Query: 243 NTHGQLGHG--------------DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG-N 287
           N + +LGH                 + +PT   I    E   +  ++ G S+  A +  +
Sbjct: 123 NQNAKLGHSYYKPSPNNVSSSSIQIVKQPT---IVKALENQKIDGLSCGTSHSFAWSNES 179

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR---RKGIHVVRVSAGDEHVVAL 338
           G+VY +G G N  LG+  +    +P+ ++  +      + V+++S G+ H +AL
Sbjct: 180 GLVYGWGLGLNGRLGNENEGVVQEPQVLECLKIAMEIKMKVLQISCGENHTLAL 233


>gi|108761023|ref|YP_629150.1| RCC1 repeat-containing protein [Myxococcus xanthus DK 1622]
 gi|108464903|gb|ABF90088.1| RCC1 repeat domain protein [Myxococcus xanthus DK 1622]
          Length = 1466

 Score = 80.9 bits (198), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 68/229 (29%), Positives = 109/229 (47%), Gaps = 14/229 (6%)

Query: 115 QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           +++ GR HTL++ ++ +V + G +  G LG G  T +      ++ P    V  V++   
Sbjct: 763 RLSVGRAHTLMVRADGTVMAWGENGSGQLGDGTSTHRT---GPVSVPGVPCVRSVASGIQ 819

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  +   G V+  G N+    G   T  P   P LVE L+GV    + AG + +  L  
Sbjct: 820 HSLALACDGTVWAWGANARGQLGD-GTTTPRVTPGLVEGLRGVVA--LAAGGDASVALRA 876

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V + G N  GQLG G   DR  P   A +E + + V +A G ++ LAV  +G ++++
Sbjct: 877 DGSVWSWGGNASGQLGDGTLTDRALP---AHVEHLSNAVAVAVGETHALAVGEDGALWAW 933

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           G+  +  LG G     L P  ++   R    V  V+AG    VA+   G
Sbjct: 934 GANGSGQLGDGGTAPSLTPVRVKGLER----VASVAAGRAFSVAVRDDG 978



 Score = 77.4 bits (189), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 72/246 (29%), Positives = 110/246 (44%), Gaps = 16/246 (6%)

Query: 101 EHSSDIVETSAGNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINF 159
            H++  VE   G   + +  +H+L +  + +V++ G +  G LG G   T       +  
Sbjct: 449 RHAAVRVEGLGGVRSVASAAHHSLAVGMDGTVWAWGRNAAGQLGDG---TTLDRARPVAV 505

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPC 218
           P    V  V+A  +H   +   G V+  G N+    G   T +R    P  V  L  V  
Sbjct: 506 PGLTSVTAVAAGGSHVLALRSDGSVWAWGYNALGQLGDGTTVDR--LTPVRVSGLGAVVA 563

Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
             V AG  F+  L   G V T G    GQLG G  + R +P  +   E + ++ ++AAG 
Sbjct: 564 --VAAGSYFSMALQSDGTVWTWGEGFEGQLGDGGGVQRLSPVRV---EGLANITRVAAGS 618

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           ++ LAV G+G V+++G      LG G   D  +P  +Q    +GI    VS G  H +AL
Sbjct: 619 AHALAVRGDGTVWAWGDNGEGQLGDGSWADRFRP--VQVPGLQGI--TAVSGGRSHSMAL 674

Query: 339 DSSGYV 344
              G V
Sbjct: 675 QGDGTV 680



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 67/220 (30%), Positives = 97/220 (44%), Gaps = 13/220 (5%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L+   +VF+ G++  G LG G  T +    T    P    V  V     HA  + + G +
Sbjct: 324 LLDTGAVFAWGANGSGQLGDGDTTDRA---TPGPVPGLNAVASVVGGAQHALVLRKDGTL 380

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
           +  G   S   GH  + R +  P  V  L GV     T   +    L   G V   G NT
Sbjct: 381 WAWGGGLSGQLGHGGSERHVV-PAPVMRLAGV-TSMATGSFHSLAALG-DGSVWAWGRNT 437

Query: 245 HGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG 304
           +GQLG G T +R    +   +E +G V  +A+   + LAV  +G V+++G  +   LG G
Sbjct: 438 YGQLGDGSTAER---HAAVRVEGLGGVRSVASAAHHSLAVGMDGTVWAWGRNAAGQLGDG 494

Query: 305 EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              D  +P A+         V  V+AG  HV+AL S G V
Sbjct: 495 TTLDRARPVAVPGL----TSVTAVAAGGSHVLALRSDGSV 530



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 73/249 (29%), Positives = 110/249 (44%), Gaps = 21/249 (8%)

Query: 100  VEHSSDIVETSAGNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRIN 158
            VEH S+ V        +  G  H L +  + ++++ G++  G LG G       S T + 
Sbjct: 905  VEHLSNAVA-------VAVGETHALAVGEDGALWAWGANGSGQLGDG---GTAPSLTPVR 954

Query: 159  FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
                  V  V+A    +  V   G  +  G N S   G   TN     P  V +LKG+  
Sbjct: 955  VKGLERVASVAAGRAFSVAVRDDGTAWAWGTNPSGQLGD-GTNHARSVPNQVTSLKGI-- 1011

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP--LEEVGSVVQIAA 276
            + ++AG +    L+  G V T G NT GQLG G +    +P  + P  + E+  V  +AA
Sbjct: 1012 RAMSAGAHHVVALSADGTVWTWGDNTLGQLGDGSS----SPTGMWPRQVPELRGVEAVAA 1067

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR-VSAGDEHV 335
            G  + +AV  +G   ++GS     LG G+   +L P A++    K    VR V A  +H 
Sbjct: 1068 GEQFTVAVLLDGTARAWGSNEYGQLGDGKTGPQLTPMAVKIEGPKIRPPVRTVRAWGQHA 1127

Query: 336  VALDSSGYV 344
            V   S G V
Sbjct: 1128 VVQMSDGTV 1136



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/192 (31%), Positives = 95/192 (49%), Gaps = 11/192 (5%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           ++ + +V + GS+  G LG G  +TQ +S  +++  S   + +V A   HA  + + G V
Sbjct: 224 VLEDGTVRAWGSNGSGQLGDG-TSTQRLSPVKVSELSG--ITEVRAGTYHALALGKDGGV 280

Query: 185 FTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           +T G N+S   G    N R +  P  V  L+ V  K V +  + +  L   G V   G+N
Sbjct: 281 WTWGSNASGQLGDGTWNDRAV--PMQVPGLERV--KAVASMDSDSLALLDTGAVFAWGAN 336

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 303
             GQLG GDT DR TP  +  L  V SVV    G  + L +  +G ++++G G +  LGH
Sbjct: 337 GSGQLGDGDTTDRATPGPVPGLNAVASVV---GGAQHALVLRKDGTLWAWGGGLSGQLGH 393

Query: 304 GEQHDELQPRAI 315
           G     + P  +
Sbjct: 394 GGSERHVVPAPV 405



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 63/200 (31%), Positives = 96/200 (48%), Gaps = 10/200 (5%)

Query: 107  VETSAGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV 165
            VE   G + +  G +++L + S+ ++ + G++  G LG G  TT+   ++R+       V
Sbjct: 1261 VEGLEGVVAVAGGDHYSLALHSDGTLSAWGNNASGQLGDGTGTTR---YSRVAVKGVDGV 1317

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAG 224
            V V A   H   +   G V+T GDN+    G   +  R    PR V  L  V    V AG
Sbjct: 1318 VDVRAGATHTVALRGDGTVWTWGDNAFGQLGDGASGTRMRLVPRPVPNLSSVSA--VGAG 1375

Query: 225  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
               T  + ++G V T G N+HGQLG GD  +R  P  +    E+  V  ++ G  + LA+
Sbjct: 1376 ARHTFAVALKGTVWTWGRNSHGQLGLGDNTNRTEPLRV---RELSDVTVVSGGADFSLAM 1432

Query: 285  TGNGVVYSFGSGSNFCLGHG 304
              +G V S+GS     LG G
Sbjct: 1433 KRDGTVLSWGSSLYGSLGLG 1452



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 76/233 (32%), Positives = 108/233 (46%), Gaps = 15/233 (6%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           M+I  G  H+L +S    V++ G +  G LG    + Q ++  R+   +  ++V V + +
Sbjct: 61  MRIAAGTQHSLYLSPGGDVWAWGGNGSGQLGGAETSLQGLAPVRL--AALENIVSVVSGD 118

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
            H+  +   G V+T G NSS   G    T+R    P  V  L  V    V AG   +  L
Sbjct: 119 AHSLALGADGSVWTWGGNSSGQLGDGTTTDRAT--PMRVAGLDSVVA--VAAGDFHSLAL 174

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
              G V   G+N HGQLG G T    TP+ +  L     VV +AAG  + LAV  +G V 
Sbjct: 175 REDGTVWAWGTNFHGQLGRGHTQPGLTPEQVPGLN---GVVALAAGFDFTLAVLEDGTVR 231

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           ++GS  +  LG G     L P  ++     GI  VR  AG  H +AL   G V
Sbjct: 232 AWGSNGSGQLGDGTSTQRLSP--VKVSELSGITEVR--AGTYHALALGKDGGV 280



 Score = 64.3 bits (155), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 56/182 (30%), Positives = 82/182 (45%), Gaps = 18/182 (9%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNR--PIFRPRLVEALKGVPC-KQ 220
           V ++S    H   V   G V   G+N S   G    T+R  P+  P       GVPC + 
Sbjct: 761 VDRLSVGRAHTLMVRADGTVMAWGENGSGQLGDGTSTHRTGPVSVP-------GVPCVRS 813

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           V +G+  +  L   G V   G+N  GQLG G T  R TP  +  L     VV +AAG   
Sbjct: 814 VASGIQHSLALACDGTVWAWGANARGQLGDGTTTPRVTPGLVEGLR---GVVALAAGGDA 870

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            +A+  +G V+S+G  ++  LG G   D   P  ++       + V V+ G+ H +A+  
Sbjct: 871 SVALRADGSVWSWGGNASGQLGDGTLTDRALPAHVEHLS----NAVAVAVGETHALAVGE 926

Query: 341 SG 342
            G
Sbjct: 927 DG 928



 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 60/199 (30%), Positives = 94/199 (47%), Gaps = 11/199 (5%)

Query: 146 PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF 205
           PET       R+     A  ++++A   H+ ++   G V+  G N S   G  +T+    
Sbjct: 43  PETPHATRTQRVVV--TAPPMRIAAGTQHSLYLSPGGDVWAWGGNGSGQLGGAETSLQGL 100

Query: 206 RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 265
            P  + AL+ +    V +G   +  L   G V T G N+ GQLG G T DR TP  +A L
Sbjct: 101 APVRLAALENI--VSVVSGDAHSLALGADGSVWTWGGNSSGQLGDGTTTDRATPMRVAGL 158

Query: 266 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
           +   SVV +AAG  + LA+  +G V+++G+  +  LG G     L P  +         V
Sbjct: 159 D---SVVAVAAGDFHSLALREDGTVWAWGTNFHGQLGRGHTQPGLTPEQVPGLN----GV 211

Query: 326 VRVSAGDEHVVALDSSGYV 344
           V ++AG +  +A+   G V
Sbjct: 212 VALAAGFDFTLAVLEDGTV 230



 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 101/234 (43%), Gaps = 16/234 (6%)

Query: 116  ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            ++ G +H + +S + +V++ G +  G LG G  +   +   ++  P    V  V+A E  
Sbjct: 1014 MSAGAHHVVALSADGTVWTWGDNTLGQLGDGSSSPTGMWPRQV--PELRGVEAVAAGEQF 1071

Query: 175  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV----PCKQVTAGLNFTGF 230
               VL  G     G N     G   T  P   P  V+ ++G     P + V A       
Sbjct: 1072 TVAVLLDGTARAWGSNEYGQLGDGKTG-PQLTPMAVK-IEGPKIRPPVRTVRAWGQHAVV 1129

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
                G V T G NT GQLG G T  R  P ++  L    SVV +++G  + LA+  +G V
Sbjct: 1130 QMSDGTVQTWGDNTFGQLGDGTTTRRAVPLTVYGLA---SVVAVSSGAWHSLALLSDGTV 1186

Query: 291  YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            +++G+     LG G      +P  +         VV + +G  H +A+ S G V
Sbjct: 1187 WAWGANGFGQLGDGTSTPRTRPVQVAGLG----DVVAIGSGGYHALAVCSDGSV 1236



 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 59/188 (31%), Positives = 84/188 (44%), Gaps = 13/188 (6%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            G++  + +S+ +V + G +  G LG G  T + V  T       A VV VS+   H+  +
Sbjct: 1124 GQHAVVQMSDGTVQTWGDNTFGQLGDGTTTRRAVPLTVYGL---ASVVAVSSGAWHSLAL 1180

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI--RGH 236
            L  G V+  G N     G   T+ P  RP  V  L  V    V  G      L +   G 
Sbjct: 1181 LSDGTVWAWGANGFGQLGD-GTSTPRTRPVQVAGLGDV----VAIGSGGYHALAVCSDGS 1235

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V T G N  GQLG G    R  P  +  LE    VV +A G  Y LA+  +G + ++G+ 
Sbjct: 1236 VWTWGYNAFGQLGDGTAESRSLPTRVEGLE---GVVAVAGGDHYSLALHSDGTLSAWGNN 1292

Query: 297  SNFCLGHG 304
            ++  LG G
Sbjct: 1293 ASGQLGDG 1300



 Score = 54.3 bits (129), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 97/230 (42%), Gaps = 18/230 (7%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  H L L S+ SV++ G +  G LG G   T     T +       VV V+A    
Sbjct: 514 VAAGGSHVLALRSDGSVWAWGYNALGQLGDG---TTVDRLTPVRVSGLGAVVAVAAGSYF 570

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           +  +   G V+T G+      G     + +  P  VE L  +   +V AG      L +R
Sbjct: 571 SMALQSDGTVWTWGEGFEGQLGDGGGVQRL-SPVRVEGLANI--TRVAAGSAHA--LAVR 625

Query: 235 GH--VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
           G   V   G N  GQLG G   DR  P  +  L+    +  ++ G S+ +A+ G+G V +
Sbjct: 626 GDGTVWAWGDNGEGQLGDGSWADRFRPVQVPGLQ---GITAVSGGRSHSMALQGDGTVRA 682

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           +G      LG G     ++P  I      GI  +  S    HV+AL + G
Sbjct: 683 WGYNGYGQLGDGTLTSRVRPALIPGL--TGIQALHPS--HLHVLALHADG 728


>gi|384245912|gb|EIE19404.1| RCC1/BLIP-II [Coccomyxa subellipsoidea C-169]
          Length = 598

 Score = 80.9 bits (198), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 96/190 (50%), Gaps = 5/190 (2%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G+ H L ++ N  + + GS+  G LG G           +     AH  +V+A   H
Sbjct: 127 VACGQGHMLAVVDNGHLAAWGSNEYGQLGTGEVGASAAQPRVLKRIRGAHFARVAAGATH 186

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           +  +  SGQV++ G+ S    GH D N    +P LV+AL       + AG  F+  +++ 
Sbjct: 187 SLALTSSGQVYSFGEGSFGALGHGDVNNRA-KPTLVQALWPEAIVSIAAGEYFSAAVSLS 245

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G V T G N +GQLG+G+  +   P+ +  +E+    VQ+A G  + +A+T  G VY++G
Sbjct: 246 GRVFTWGRNKYGQLGNGEFGNAFLPQPVPGIEQA---VQVACGDHHCIALTRWGEVYTWG 302

Query: 295 SGSNFCLGHG 304
             S+  LG G
Sbjct: 303 LHSSGQLGQG 312



 Score = 74.7 bits (182), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 64/223 (28%), Positives = 99/223 (44%), Gaps = 18/223 (8%)

Query: 129 SSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQS 181
           SS+++ G S  G  G G       PE  Q +            VV  +    ++AFV + 
Sbjct: 37  SSLYTWGRSDLGQTGSGRDQNSTAPEPVQALQ--------GKDVVHAAGGSYNSAFVTRD 88

Query: 182 GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 241
           G+++T G N +   G +        P  V AL+      V  G      +   GH+   G
Sbjct: 89  GELYTTGSNDARQLGVKG-REVALEPIRVSALEMNNVHGVACGQGHMLAVVDNGHLAAWG 147

Query: 242 SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 301
           SN +GQLG G+         +          ++AAG ++ LA+T +G VYSFG GS   L
Sbjct: 148 SNEYGQLGTGEVGASAAQPRVLKRIRGAHFARVAAGATHSLALTSSGQVYSFGEGSFGAL 207

Query: 302 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           GHG+ ++  +P  +Q    + I  V ++AG+    A+  SG V
Sbjct: 208 GHGDVNNRAKPTLVQALWPEAI--VSIAAGEYFSAAVSLSGRV 248



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 61/228 (26%), Positives = 109/228 (47%), Gaps = 9/228 (3%)

Query: 119 GRYHTLLIS-NSSVFSCGSSLCGVLG-HGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           G Y++  ++ +  +++ GS+    LG  G E    +   R++     +V  V+  + H  
Sbjct: 78  GSYNSAFVTRDGELYTTGSNDARQLGVKGREV--ALEPIRVSALEMNNVHGVACGQGHML 135

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            V+ +G +   G N     G  +      +PR+++ ++G    +V AG   +  LT  G 
Sbjct: 136 AVVDNGHLAAWGSNEYGQLGTGEVGASAAQPRVLKRIRGAHFARVAAGATHSLALTSSGQ 195

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           V++ G  + G LGHGD  +R  P  +  L    ++V IAAG  +  AV+ +G V+++G  
Sbjct: 196 VYSFGEGSFGALGHGDVNNRAKPTLVQALWPE-AIVSIAAGEYFSAAVSLSGRVFTWGRN 254

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
               LG+GE  +   P+ +    +     V+V+ GD H +AL   G V
Sbjct: 255 KYGQLGNGEFGNAFLPQPVPGIEQ----AVQVACGDHHCIALTRWGEV 298



 Score = 54.3 bits (129), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 67/240 (27%), Positives = 108/240 (45%), Gaps = 24/240 (10%)

Query: 115 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQC-VSFTRINFPSAAHVVQVSASE 172
           ++  G  H+L L S+  V+S G    G LGHG    +   +  +  +P A  +V ++A E
Sbjct: 179 RVAAGATHSLALTSSGQVYSFGEGSFGALGHGDVNNRAKPTLVQALWPEA--IVSIAAGE 236

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             +A V  SG+VFT G N     G+ +     F P+ V  ++     QV  G +    LT
Sbjct: 237 YFSAAVSLSGRVFTWGRNKYGQLGNGEFGN-AFLPQPVPGIE--QAVQVACGDHHCIALT 293

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRP-------TPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
             G V+T G ++ GQLG G  L          +P  +  L +  S+ Q++AG  +   V+
Sbjct: 294 RWGEVYTWGLHSSGQLGQGSNLGSEALNGCLCSPSRVDSLADQ-SIRQVSAGARHSFFVS 352

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV----RVSAGDEHVVALDSS 341
               ++  G+G+N     G+   +  P      R  G+  +     V+AGD  +  LD S
Sbjct: 353 PGEQLW--GAGAN---DEGQLALQSVPSVALPTRVPGLPGLPMRFAVAAGDHSIAVLDES 407


>gi|118353390|ref|XP_001009963.1| regulator of chromosome condensation (RCC1) [Tetrahymena
           thermophila]
 gi|89291730|gb|EAR89718.1| regulator of chromosome condensation (RCC1) [Tetrahymena
           thermophila SB210]
          Length = 1166

 Score = 80.9 bits (198), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 55/191 (28%), Positives = 93/191 (48%), Gaps = 7/191 (3%)

Query: 159 FPSAAHVVQ-VSASENHAAFVLQSGQVFTCGDNSSFCCG-HRDTNRPIFRPRLVEALKGV 216
           F S + V++ ++  E H +F+ Q+G V++ G+N+    G   D +     P LVE LKG 
Sbjct: 63  FTSFSVVIEDIACGEEHTSFIAQNGYVYSMGNNNQGQLGVSVDESYYKSAPTLVEGLKGY 122

Query: 217 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
              Q++ G   T  +   G + T G N  GQLG G + +  TP+ +     +   V ++ 
Sbjct: 123 KAVQISCGAYHTATVCDNGQLFTWGQNCEGQLGIGKSDNMTTPQIVDLKNNLA--VFVSC 180

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
           G    + +T    ++ FG G    LG G + +E +PR +Q   +   ++V +S GD H +
Sbjct: 181 GKRNTMVITQTQKIFGFGDGKCGQLGLGNECNEYKPRQLQIQMQ---NIVAISCGDRHTL 237

Query: 337 ALDSSGYVSLC 347
            L+  G    C
Sbjct: 238 FLNEEGEAFSC 248



 Score = 68.2 bits (165), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 60/229 (26%), Positives = 106/229 (46%), Gaps = 22/229 (9%)

Query: 116 ITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSASEN 173
           ++ G+ +T++I+ +  +F  G   CG LG G E   C  +          ++V +S  + 
Sbjct: 178 VSCGKRNTMVITQTQKIFGFGDGKCGQLGLGNE---CNEYKPRQLQIQMQNIVAISCGDR 234

Query: 174 HAAFVLQSGQVFTCGDNS--SFCCGH--RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
           H  F+ + G+ F+CG+N+     C +  + +N P+ + +    LK V  K + A    + 
Sbjct: 235 HTLFLNEEGEAFSCGNNTYNQLGCANNSQSSNIPV-KVKQKSTLKFV--KVIAANTPMSA 291

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
            L+  G+++  G+   GQ       DRPT    AP +    ++ I  G  ++  + G G 
Sbjct: 292 ALSSEGYLYLWGTGFFGQF------DRPTRCEFAPKD----LLDICIGNQFICLLDGEGK 341

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           VYS+GS     LG G  + +     IQ  + K  +V R+  G   V A+
Sbjct: 342 VYSWGSNMFGELGQGIANGQQALEPIQVDKIKDKNVKRLYCGANFVFAM 390


>gi|354485549|ref|XP_003504946.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like
           [Cricetulus griseus]
          Length = 887

 Score = 80.9 bits (198), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 71/243 (29%), Positives = 110/243 (45%), Gaps = 23/243 (9%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 165
           +Q  +G  H+LL+ SN  V+SCG +  G LG         PE  Q +    I+       
Sbjct: 24  LQAASGERHSLLLFSNHRVYSCGDNSLGQLGQKREQNTEQPEPIQALGTLDIDL------ 77

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
             VS  + H+  V   G+VF  G  S    G  +       P  ++ L G+   QV+ G 
Sbjct: 78  --VSCGKEHSIAVCHKGRVFAWGAGSEGQLGIGEFKEINLMPMRIKTLGGIKIIQVSCGH 135

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             +  L+  G V + G N+ GQLG G  +  + +P+ +  LE +  + Q+AAG S+  A+
Sbjct: 136 YHSLALSEDGQVFSWGKNSQGQLGLGMQSSSQASPQKVTSLEGI-PLAQVAAGGSHSFAL 194

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQ---PRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           +  G  Y +GS S   L    ++  +Q   P +I   +  G  V+ +S G EH   L   
Sbjct: 195 SLTGTSYGWGSNSVGQLALSGENSTVQISKPHSIDALKNLG--VIYISCGYEHTAVLTKD 252

Query: 342 GYV 344
           G V
Sbjct: 253 GQV 255



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/190 (27%), Positives = 97/190 (51%), Gaps = 8/190 (4%)

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALK 214
           R+N      ++Q ++ E H+  +  + +V++CGDNS    G  R+ N    +P  ++AL 
Sbjct: 14  RLNGRDGLELLQAASGERHSLLLFSNHRVYSCGDNSLGQLGQKREQNTE--QPEPIQALG 71

Query: 215 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQ 273
            +    V+ G   +  +  +G V   G+ + GQLG G+  +    P  I  L  +  ++Q
Sbjct: 72  TLDIDLVSCGKEHSIAVCHKGRVFAWGAGSEGQLGIGEFKEINLMPMRIKTLGGI-KIIQ 130

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGD 332
           ++ G  + LA++ +G V+S+G  S   LG G Q   +  P+ + +   +GI + +V+AG 
Sbjct: 131 VSCGHYHSLALSEDGQVFSWGKNSQGQLGLGMQSSSQASPQKVTSL--EGIPLAQVAAGG 188

Query: 333 EHVVALDSSG 342
            H  AL  +G
Sbjct: 189 SHSFALSLTG 198



 Score = 65.1 bits (157), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 91/194 (46%), Gaps = 12/194 (6%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++ G YH+L +S +  VFS G +  G LG G +++   S  ++       + QV+A  
Sbjct: 129 IQVSCGHYHSLALSEDGQVFSWGKNSQGQLGLGMQSSSQASPQKVTSLEGIPLAQVAAGG 188

Query: 173 NHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
           +H+  +  +G  +  G NS         ++   I +P  ++ALK +    ++ G   T  
Sbjct: 189 SHSFALSLTGTSYGWGSNSVGQLALSGENSTVQISKPHSIDALKNLGVIYISCGYEHTAV 248

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           LT  G V T G N+ GQL +     R  P+ +  ++  G V +I  G  + +A       
Sbjct: 249 LTKDGQVFTFGDNSSGQLQNNPRGKRRGPQLVEGIK--GQVSKIECGSYHTIA------- 299

Query: 291 YSFGSGSNFCLGHG 304
           Y + +G    LGHG
Sbjct: 300 YVYTTGQVVSLGHG 313



 Score = 60.8 bits (146), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 72/142 (50%), Gaps = 8/142 (5%)

Query: 206 RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 265
           +PR +    G+   Q  +G   +  L     V++CG N+ GQLG     +   P+   P+
Sbjct: 11  QPRRLNGRDGLELLQAASGERHSLLLFSNHRVYSCGDNSLGQLGQKREQNTEQPE---PI 67

Query: 266 EEVGS--VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKG 322
           + +G+  +  ++ G  + +AV   G V+++G+GS   LG GE +   L P  I+T    G
Sbjct: 68  QALGTLDIDLVSCGKEHSIAVCHKGRVFAWGAGSEGQLGIGEFKEINLMPMRIKTL--GG 125

Query: 323 IHVVRVSAGDEHVVALDSSGYV 344
           I +++VS G  H +AL   G V
Sbjct: 126 IKIIQVSCGHYHSLALSEDGQV 147


>gi|449446720|ref|XP_004141119.1| PREDICTED: uncharacterized protein LOC101220986 [Cucumis sativus]
          Length = 1075

 Score = 80.9 bits (198), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 70/249 (28%), Positives = 112/249 (44%), Gaps = 28/249 (11%)

Query: 114 MQITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G +H+ L  SN  +++ G    GVLGHG    + V + R +   S    ++V+  
Sbjct: 376 LSVACGTWHSALATSNGKLYTFGDGTYGVLGHG--DRESVVYPREVQLLSGLRTIKVACG 433

Query: 172 ENHAAFVLQ----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
             H A +++          S ++FT GD   +  GH +    +  P  V +L      Q+
Sbjct: 434 VWHTAAIVEVMSQTGSNMSSRKLFTWGDGDKYRLGHGNKETYLL-PTCVSSLIDYNFHQL 492

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL----EEVGSVVQ-IAA 276
             G N T  LT  GHV T G   +GQLG+      P+   + P       VG  V+ I+ 
Sbjct: 493 ACGHNMTVALTTSGHVFTMGGTAYGQLGN------PSSDGVIPCLVQDRLVGEFVEEISC 546

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
           G  + + +T    V+S+G GSN  LGHG+  D   P  I+  + +  HV  +S G     
Sbjct: 547 GAYHTVVLTSRNEVFSWGRGSNGRLGHGDVEDRKAPTLIEALKDR--HVKSISCGSNFTA 604

Query: 337 ALDSSGYVS 345
           ++    +VS
Sbjct: 605 SICIHKWVS 613



 Score = 75.1 bits (183), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 55/176 (31%), Positives = 81/176 (46%), Gaps = 5/176 (2%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++    H A V + G+VFT G+      GH   +R   RP LVE L       V  G
Sbjct: 268 VQQIACGVRHIALVTRQGEVFTWGEECGGRLGH-GIDRDFSRPHLVEFLAVSHVDFVACG 326

Query: 225 LNFTGFLTIRGHVHTCGSN--THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
              T  +T    ++T G      G LGHG  +    PK +    E   V+ +A G  +  
Sbjct: 327 EYHTCAITSSNDLYTWGDGIFNSGILGHGTDISHWIPKRVVGSLEGLQVLSVACGTWHSA 386

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             T NG +Y+FG G+   LGHG++   + PR +Q     G+  ++V+ G  H  A+
Sbjct: 387 LATSNGKLYTFGDGTYGVLGHGDRESVVYPREVQLL--SGLRTIKVACGVWHTAAI 440



 Score = 75.1 bits (183), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 68/247 (27%), Positives = 112/247 (45%), Gaps = 23/247 (9%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVS 169
            QI  G  H  L++    VF+ G    G LGHG +      F+R   + F + +HV  V+
Sbjct: 269 QQIACGVRHIALVTRQGEVFTWGEECGGRLGHGIDR----DFSRPHLVEFLAVSHVDFVA 324

Query: 170 ASENHAAFVLQSGQVFTCGDN--SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
             E H   +  S  ++T GD   +S   GH          R+V +L+G+    V  G   
Sbjct: 325 CGEYHTCAITSSNDLYTWGDGIFNSGILGHGTDISHWIPKRVVGSLEGLQVLSVACGTWH 384

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV--- 284
           +   T  G ++T G  T+G LGHGD      P+ +  L  +   +++A G  +  A+   
Sbjct: 385 SALATSNGKLYTFGDGTYGVLGHGDRESVVYPREVQLLSGL-RTIKVACGVWHTAAIVEV 443

Query: 285 ---TGNGV----VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
              TG+ +    ++++G G  + LGHG +   L P  + +      H  +++ G    VA
Sbjct: 444 MSQTGSNMSSRKLFTWGDGDKYRLGHGNKETYLLPTCVSSLIDYNFH--QLACGHNMTVA 501

Query: 338 LDSSGYV 344
           L +SG+V
Sbjct: 502 LTTSGHV 508



 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 110/242 (45%), Gaps = 17/242 (7%)

Query: 116 ITTGRYHTLLISNSS-VFSCGSSL--CGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +  G YHT  I++S+ +++ G  +   G+LGHG + +  +    +       V+ V+   
Sbjct: 323 VACGEYHTCAITSSNDLYTWGDGIFNSGILGHGTDISHWIPKRVVGSLEGLQVLSVACGT 382

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG-------- 224
            H+A    +G+++T GD +    GH D    ++ PR V+ L G+   +V  G        
Sbjct: 383 WHSALATSNGKLYTFGDGTYGVLGHGDRESVVY-PREVQLLSGLRTIKVACGVWHTAAIV 441

Query: 225 --LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
             ++ TG       + T G     +LGHG+      P  ++ L +  +  Q+A G +  +
Sbjct: 442 EVMSQTGSNMSSRKLFTWGDGDKYRLGHGNKETYLLPTCVSSLIDY-NFHQLACGHNMTV 500

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           A+T +G V++ G  +   LG+    D + P  +Q  R  G  V  +S G  H V L S  
Sbjct: 501 ALTTSGHVFTMGGTAYGQLGN-PSSDGVIPCLVQD-RLVGEFVEEISCGAYHTVVLTSRN 558

Query: 343 YV 344
            V
Sbjct: 559 EV 560


>gi|147902812|ref|NP_001084927.1| inhibitor of Bruton tyrosine kinase [Xenopus laevis]
 gi|82202103|sp|Q6NRS1.1|IBTK_XENLA RecName: Full=Inhibitor of Bruton tyrosine kinase; Short=IBtk
 gi|47122993|gb|AAH70653.1| MGC82217 protein [Xenopus laevis]
          Length = 1339

 Score = 80.9 bits (198), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 71/232 (30%), Positives = 111/232 (47%), Gaps = 20/232 (8%)

Query: 129 SSVFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSASENHAAFVLQSGQVFTC 187
           + +++ G ++   LGHG + ++        FP S  ++ Q+   + H+ F+ Q GQV+TC
Sbjct: 143 TELYTWGDNVNFTLGHGTQQSKHHPELVEMFPRSGVYIKQMVLCKFHSVFLSQKGQVYTC 202

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G       GH D       PRLVE L+G PC QV    + T  LT  G+V+T G NT  Q
Sbjct: 203 GHGQGGRLGHGD-ELTCLVPRLVEGLRGHPCTQVAGAKDHTVVLTEDGYVYTFGLNTFHQ 261

Query: 248 LGHGDTLDRPTPKSIAPLE------EVGSVVQIAAGPSYMLAVTGNGVVYSFG-SGSNFC 300
           LG    +  P P S  P +      +  +V+ +AAG  + +  T +  VY+ G +G    
Sbjct: 262 LG----IQPPPPNSNVPRQIQAKTMKGKTVLGVAAGRFHTVLWTKDA-VYTVGLNGGQ-- 314

Query: 301 LGHGEQHDELQ----PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSLCS 348
           LG+ +  +  +    PR +     K I++  VSA D   V +   G + L S
Sbjct: 315 LGYLQDPNGEKFVSCPRQVSALHHKDINITLVSASDGATVCVSERGDIYLLS 366



 Score = 45.4 bits (106), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 74/160 (46%), Gaps = 10/160 (6%)

Query: 98  QSVEHSSDIVETSAGN----MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCV 152
           Q  +H  ++VE    +     Q+   ++H++ +S    V++CG    G LGHG E T C+
Sbjct: 161 QQSKHHPELVEMFPRSGVYIKQMVLCKFHSVFLSQKGQVYTCGHGQGGRLGHGDELT-CL 219

Query: 153 SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA 212
               +         QV+ +++H   + + G V+T G N+    G +        PR ++A
Sbjct: 220 VPRLVEGLRGHPCTQVAGAKDHTVVLTEDGYVYTFGLNTFHQLGIQPPPPNSNVPRQIQA 279

Query: 213 --LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH 250
             +KG     V AG  F   L  +  V+T G N  GQLG+
Sbjct: 280 KTMKGKTVLGVAAG-RFHTVLWTKDAVYTVGLNG-GQLGY 317


>gi|118396546|ref|XP_001030612.1| Regulator of chromosome condensation (RCC1) [Tetrahymena
           thermophila]
 gi|89284921|gb|EAR82949.1| Regulator of chromosome condensation (RCC1) [Tetrahymena
           thermophila SB210]
          Length = 1120

 Score = 80.9 bits (198), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 57/239 (23%), Positives = 113/239 (47%), Gaps = 19/239 (7%)

Query: 116 ITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSF-TRINFPSAA-HVVQVSASEN 173
           +  G  H+L+  N  ++SCG +  G+LG G    +      +I FP     +V +SA+  
Sbjct: 322 LAVGSIHSLIYINGKLYSCGKNYNGILGIGQSKIEFSKIPQQITFPKKTIKIVGISANFF 381

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGH-----RDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
           H+     +G +++ G+      GH        N+  F P+ ++ L+G    Q + G+ ++
Sbjct: 382 HSLAWDDNGNIYSWGEGQHGQLGHPIEKGYSFNKQEFTPKRIQTLQGKFVIQASCGMKYS 441

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDT-----LDRPTPKSIAPLEEVGSV----VQIAAGPS 279
             +T  G ++  G   + Q+   D      ++   PK + P E+   +    ++++ G S
Sbjct: 442 AAVTNEGELYGWGKGDYNQVESQDDQQNSLMESLYPKKLMP-EDSNFIHVKFIKVSCGAS 500

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           +   +   G +Y++G+ S +CLGH +Q D   P+ ++  + K    + VS GD+  V +
Sbjct: 501 HNATIDQFGRLYTWGNSSEYCLGHLKQQDLKFPQLVRILKDK--VTIDVSCGDKFTVVI 557


>gi|145547042|ref|XP_001459203.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124427027|emb|CAK91806.1| unnamed protein product [Paramecium tetraurelia]
          Length = 560

 Score = 80.9 bits (198), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 104/218 (47%), Gaps = 20/218 (9%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
           +F+ G +  G L  G +  +C +   +       V  +S+  NH+  V Q GQ+F CG  
Sbjct: 17  LFAWGRNKDGELSIGNQK-KCNAPKAVQGLKNQTVQLISSGSNHSGIVTQDGQLFICGSA 75

Query: 191 SSFCCGHRDTNRPIFRPR--LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 248
                G  D N+P + P+  LV+A+KG+   QV  G   T  L   G V+  G   H +L
Sbjct: 76  LHGKLGFEDANQPSY-PKFLLVQAMKGLFVTQVATGDYHTLCLLDNGQVYAWGGTLHKKL 134

Query: 249 GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG----SNFCLGHG 304
           G         P  I  L++  ++VQI  G  +  A++ NG +Y++G G    +   LGHG
Sbjct: 135 GS----KAGKPARIETLKQ--TIVQIGCGDFHSAALSANGDLYTWGGGGRDYNRGQLGHG 188

Query: 305 EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
             +D   P+ ++       ++V+ S G  H++ALD  G
Sbjct: 189 HLNDVETPQIVKD------NIVKFSCGGYHMMALDKDG 220



 Score = 74.3 bits (181), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 66/252 (26%), Positives = 109/252 (43%), Gaps = 31/252 (12%)

Query: 116 ITTGRYHT-LLISNSSVFSCGSSLCGVLG-HGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           I++G  H+ ++  +  +F CGS+L G LG           F  +       V QV+  + 
Sbjct: 53  ISSGSNHSGIVTQDGQLFICGSALHGKLGFEDANQPSYPKFLLVQAMKGLFVTQVATGDY 112

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H   +L +GQV+  G        H+       +P  +E LK     Q+  G   +  L+ 
Sbjct: 113 HTLCLLDNGQVYAWGGTL-----HKKLGSKAGKPARIETLKQTIV-QIGCGDFHSAALSA 166

Query: 234 RGHVHTCGSN----THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
            G ++T G        GQLGHG   D  TP+ +       ++V+ + G  +M+A+  +G 
Sbjct: 167 NGDLYTWGGGGRDYNRGQLGHGHLNDVETPQIVKD-----NIVKFSCGGYHMMALDKDGE 221

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQ-TFRRKGI-------------HVVRVSAGDEHV 335
           ++S+GSG     G GE  D L P+ ++  F +K I              +  +S G  H 
Sbjct: 222 LWSWGSGMYGETGQGEFQDSLLPKKVKINFNQKHIIIDDIFVQNKQESTIKEISLGGHHS 281

Query: 336 VALDSSGYVSLC 347
           + L + G V  C
Sbjct: 282 LLLSNKGIVYAC 293



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/189 (27%), Positives = 85/189 (44%), Gaps = 22/189 (11%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGP-ETTQCVSFTRINFPSAAHVV----- 166
           ++ + G YH + L  +  ++S GS + G  G G  + +      +INF +  H++     
Sbjct: 204 VKFSCGGYHMMALDKDGELWSWGSGMYGETGQGEFQDSLLPKKVKINF-NQKHIIIDDIF 262

Query: 167 ----------QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKG 215
                     ++S   +H+  +   G V+ CG       G + T N+  F+  LV  + G
Sbjct: 263 VQNKQESTIKEISLGGHHSLLLSNKGIVYACGYAQHGQLGIKATENQNKFQ--LVIGISG 320

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
               Q+ AG N +  LT    V+TCG N  GQLG GD   R     I  LE+   + Q+ 
Sbjct: 321 KTIVQIAAGWNHSIVLTSHSDVYTCGHNQAGQLGVGDYESRTQYTRINFLEQR-RIKQLF 379

Query: 276 AGPSYMLAV 284
           AG ++  A+
Sbjct: 380 AGGNHSWAL 388



 Score = 43.1 bits (100), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 60/249 (24%), Positives = 106/249 (42%), Gaps = 36/249 (14%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSS----LCGVLGHG----PETTQCVSFTRINFPSAAH 164
           +QI  G +H+  +S N  +++ G        G LGHG     ET Q V           +
Sbjct: 152 VQIGCGDFHSAALSANGDLYTWGGGGRDYNRGQLGHGHLNDVETPQIVK---------DN 202

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRP------------IFRPRL 209
           +V+ S    H   + + G++++ G       G    +D+  P            I     
Sbjct: 203 IVKFSCGGYHMMALDKDGELWSWGSGMYGETGQGEFQDSLLPKKVKINFNQKHIIIDDIF 262

Query: 210 VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 269
           V+  +    K+++ G + +  L+ +G V+ CG   HGQLG   T ++   + +  +    
Sbjct: 263 VQNKQESTIKEISLGGHHSLLLSNKGIVYACGYAQHGQLGIKATENQNKFQLVIGISG-K 321

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
           ++VQIAAG ++ + +T +  VY+ G      LG G+     Q   I    ++ I   ++ 
Sbjct: 322 TIVQIAAGWNHSIVLTSHSDVYTCGHNQAGQLGVGDYESRTQYTRINFLEQRRIK--QLF 379

Query: 330 AGDEHVVAL 338
           AG  H  AL
Sbjct: 380 AGGNHSWAL 388



 Score = 40.4 bits (93), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 2/71 (2%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QI  G  H++ L S+S V++CG +  G LG G   ++   +TRINF     + Q+ A  
Sbjct: 324 VQIAAGWNHSIVLTSHSDVYTCGHNQAGQLGVGDYESRT-QYTRINFLEQRRIKQLFAGG 382

Query: 173 NHAAFVLQSGQ 183
           NH+  ++   Q
Sbjct: 383 NHSWALIDYNQ 393



 Score = 37.7 bits (86), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 29/109 (26%), Positives = 54/109 (49%), Gaps = 1/109 (0%)

Query: 236 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
           ++   G N  G+L  G+      PK++  L+   +V  I++G ++   VT +G ++  GS
Sbjct: 16  YLFAWGRNKDGELSIGNQKKCNAPKAVQGLKNQ-TVQLISSGSNHSGIVTQDGQLFICGS 74

Query: 296 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             +  LG  + +    P+ +     KG+ V +V+ GD H + L  +G V
Sbjct: 75  ALHGKLGFEDANQPSYPKFLLVQAMKGLFVTQVATGDYHTLCLLDNGQV 123


>gi|170578406|ref|XP_001894395.1| hypothetical protein [Brugia malayi]
 gi|158599034|gb|EDP36761.1| conserved hypothetical protein [Brugia malayi]
          Length = 988

 Score = 80.9 bits (198), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 75/272 (27%), Positives = 107/272 (39%), Gaps = 58/272 (21%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I +G  HTL +S+   V+SCGS+  G LG G       +   ++  S   ++Q+SA  +H
Sbjct: 52  IASGERHTLFLSDDGKVWSCGSNYNGELGRGGVREGSYTIYPVHISSTVSIIQISAGRSH 111

Query: 175 AAFVLQSGQVFTCGDNS------------------------------------------- 191
           +  V   G++F  G NS                                           
Sbjct: 112 SMAVSDDGRLFAWGSNSHGQLAMSGDILASDTPKRVPSLPETVQVACGASHTVSLNGGGR 171

Query: 192 SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG 251
            F  G +   R    P  VE    +P  Q++AG  FT  LT  G +   G N  GQLG  
Sbjct: 172 VFIWGQQSDGRIRHSPAEVEIFISIPIVQISAGNLFTMALTASGTLFAWGKNEEGQLGDF 231

Query: 252 DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ 311
              D   P ++     + SVV +  G S+ +A+T  G V+S GS S   LG G      Q
Sbjct: 232 TNKDVVNPCAVP---NINSVVAVECGDSHSIALTHEGRVFSCGSDSFGQLGCG------Q 282

Query: 312 PRAIQTFRRK-----GIHVVRVSAGDEHVVAL 338
           P   Q   R      G HV R++ G  H + +
Sbjct: 283 PNRSQNCMRGITEMLGSHVTRIACGRCHTIVV 314



 Score = 71.6 bits (174), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 62/222 (27%), Positives = 103/222 (46%), Gaps = 24/222 (10%)

Query: 131 VFSCGSSLCGVLGHGPETT----QCVSFTRINFPSAAH-----VVQVSASENHAAFVLQS 181
           VF C     G LG  P++     Q +   R+ + +        V  +++ E H  F+   
Sbjct: 8   VFGCAGD--GQLGFRPDSVESDAQMMIVPRLVYGAPTRQNGVIVKSIASGERHTLFLSDD 65

Query: 182 GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 241
           G+V++CG N +   G        +    V     V   Q++AG + +  ++  G +   G
Sbjct: 66  GKVWSCGSNYNGELGRGGVREGSYTIYPVHISSTVSIIQISAGRSHSMAVSDDGRLFAWG 125

Query: 242 SNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
           SN+HGQL   GD L   TPK +  L E    VQ+A G S+ +++ G G V+ +G  S+  
Sbjct: 126 SNSHGQLAMSGDILASDTPKRVPSLPE---TVQVACGASHTVSLNGGGRVFIWGQQSDGR 182

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           + H        P  ++ F    I +V++SAG+   +AL +SG
Sbjct: 183 IRHS-------PAEVEIF--ISIPIVQISAGNLFTMALTASG 215



 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/166 (30%), Positives = 81/166 (48%), Gaps = 10/166 (6%)

Query: 106 IVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV 165
           IV+ SAGN+      +   L ++ ++F+ G +  G LG   + T          P+   V
Sbjct: 198 IVQISAGNL------FTMALTASGTLFAWGKNEEGQLG---DFTNKDVVNPCAVPNINSV 248

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
           V V   ++H+  +   G+VF+CG +S    G    NR     R +  + G    ++  G 
Sbjct: 249 VAVECGDSHSIALTHEGRVFSCGSDSFGQLGCGQPNRSQNCMRGITEMLGSHVTRIACGR 308

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV 271
             T  +   G +HT G N++GQLGHG+T ++ TP+ I  +E V SV
Sbjct: 309 CHT-IVVANGKMHTFGLNSNGQLGHGNTRNQITPRVIDSVENVASV 353



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/145 (32%), Positives = 75/145 (51%), Gaps = 13/145 (8%)

Query: 207 PRLVEAL----KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           PRLV        GV  K + +G   T FL+  G V +CGSN +G+LG G    R    +I
Sbjct: 34  PRLVYGAPTRQNGVIVKSIASGERHTLFLSDDGKVWSCGSNYNGELGRGGV--REGSYTI 91

Query: 263 AP--LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFR 319
            P  +    S++QI+AG S+ +AV+ +G ++++GS S+  L   G+      P+ + +  
Sbjct: 92  YPVHISSTVSIIQISAGRSHSMAVSDDGRLFAWGSNSHGQLAMSGDILASDTPKRVPSLP 151

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYV 344
                 V+V+ G  H V+L+  G V
Sbjct: 152 ----ETVQVACGASHTVSLNGGGRV 172


>gi|444910459|ref|ZP_21230644.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444719396|gb|ELW60193.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 693

 Score = 80.9 bits (198), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 78/248 (31%), Positives = 115/248 (46%), Gaps = 25/248 (10%)

Query: 100 VEHSSDIVETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRIN 158
           V   +D+V  SAG+        H+L L ++ +V + G +  G LG G  T +    + + 
Sbjct: 392 VPDLTDVVALSAGDS-------HSLALRTDGTVRAWGVNYSGQLGDGTTTHR---LSPVQ 441

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRL--VEALKGV 216
            P    VV +SA  NH   +  +G V+  G NS    G   T      PRL  V+ L   
Sbjct: 442 VPDLTDVVALSAGGNHTLALRTNGTVWAWGSNSDGQLGDGTTT-----PRLSPVQMLGLT 496

Query: 217 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
               ++AG   +  +   G V   GSN+ GQLG G T  R TP  +  L +V   V ++A
Sbjct: 497 NVVALSAGYYHSLAVHTDGTVWAWGSNSDGQLGDGTTTHRLTPVQVPGLTDV---VALSA 553

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
           G S+ LA+  +G V+++GS S+  LG G       P  +         VV +SAG  H +
Sbjct: 554 GDSHSLALRTDGTVWAWGSNSSSQLGDGTTTPRGSPVQVPGL----TDVVALSAGGAHSL 609

Query: 337 ALDSSGYV 344
           AL + G V
Sbjct: 610 ALRTDGTV 617



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 73/248 (29%), Positives = 111/248 (44%), Gaps = 33/248 (13%)

Query: 104 SDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA 163
           +D+V  SAG+       Y   L ++ +V++ G +  G LG G  T +      +  P   
Sbjct: 96  TDVVALSAGS------SYTLALRTDGTVWAWGYNFYGQLGDGTTTPR---LAPVQVPGLT 146

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR---PIFRPRLVEALKGVPCKQ 220
            VV +S+   H+  +   G V+  GDN+S   G     R   P+  P L + +       
Sbjct: 147 DVVALSSGIYHSLALRTDGTVWAWGDNASGQLGDGTATRRLSPVQVPGLTDVVA------ 200

Query: 221 VTAGLNFTGF--LTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
               L+  G+  L +R  G V   GSN  GQLG G    R +P  ++ L  V   V ++A
Sbjct: 201 ----LSAGGYHSLAVRTDGTVWAWGSNFSGQLGDGTATPRLSPVQVSGLTNV---VALSA 253

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
             SY LA+  +G V+++G  S   LG G     L P  +        +VV +SAG  H +
Sbjct: 254 DDSYTLALRTDGTVWAWGYNSYGQLGDGTTTPRLSPVQVPGL----TNVVALSAGYSHSL 309

Query: 337 ALDSSGYV 344
           AL + G V
Sbjct: 310 ALRTDGTV 317



 Score = 75.5 bits (184), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 64/224 (28%), Positives = 105/224 (46%), Gaps = 13/224 (5%)

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           Y   L ++ +V++ G +  G LG G  T +    + +  P   +VV +SA  +H+  +  
Sbjct: 257 YTLALRTDGTVWAWGYNSYGQLGDGTTTPR---LSPVQVPGLTNVVALSAGYSHSLALRT 313

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            G V+  G N +   G+     P  R   +     +    ++AG + +  L   G V   
Sbjct: 314 DGTVWAWGYNYNGQLGN---GIPTQRSPSIPVFGLIDVVALSAGYSHSLALRTDGTVWAW 370

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
           G N+ GQLG G T+ RP+P  +  L +   VV ++AG S+ LA+  +G V ++G   +  
Sbjct: 371 GYNSLGQLGDGTTIPRPSPVQVPDLTD---VVALSAGDSHSLALRTDGTVRAWGVNYSGQ 427

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           LG G     L P  +         VV +SAG  H +AL ++G V
Sbjct: 428 LGDGTTTHRLSPVQVPDL----TDVVALSAGGNHTLALRTNGTV 467



 Score = 74.7 bits (182), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 73/242 (30%), Positives = 111/242 (45%), Gaps = 21/242 (8%)

Query: 104 SDIVETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA 162
           +D+V  SAGN       +H L L ++ +V++ GS+  G LG G  T +  S   +  P  
Sbjct: 46  TDVVALSAGN-------HHCLALRTDGTVWAWGSNSSGQLGDGTTTPRLSS---VQVPGL 95

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
             VV +SA  ++   +   G V+  G N     G   T  P   P  V  L  V    ++
Sbjct: 96  TDVVALSAGSSYTLALRTDGTVWAWGYNFYGQLGD-GTTTPRLAPVQVPGLTDVVA--LS 152

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
           +G+  +  L   G V   G N  GQLG G    R +P  +  L +V   V ++AG  + L
Sbjct: 153 SGIYHSLALRTDGTVWAWGDNASGQLGDGTATRRLSPVQVPGLTDV---VALSAGGYHSL 209

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           AV  +G V+++GS  +  LG G     L P  +        +VV +SA D + +AL + G
Sbjct: 210 AVRTDGTVWAWGSNFSGQLGDGTATPRLSPVQVSGL----TNVVALSADDSYTLALRTDG 265

Query: 343 YV 344
            V
Sbjct: 266 TV 267



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 68/232 (29%), Positives = 108/232 (46%), Gaps = 18/232 (7%)

Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  H+L + ++ +V++ GS+  G LG G  T +    + +  P    VV +SA  +H
Sbjct: 1   MAAGYSHSLALHTDGTVWAWGSNSSGQLGDGTTTPRG---SPVQVPGLTDVVALSAGNHH 57

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRL--VEALKGVPCKQVTAGLNFTGFLT 232
              +   G V+  G NSS   G   T      PRL  V+         ++AG ++T  L 
Sbjct: 58  CLALRTDGTVWAWGSNSSGQLGDGTTT-----PRLSSVQVPGLTDVVALSAGSSYTLALR 112

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G V   G N +GQLG G T  R  P  +  L +   VV +++G  + LA+  +G V++
Sbjct: 113 TDGTVWAWGYNFYGQLGDGTTTPRLAPVQVPGLTD---VVALSSGIYHSLALRTDGTVWA 169

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           +G  ++  LG G     L P  +         VV +SAG  H +A+ + G V
Sbjct: 170 WGDNASGQLGDGTATRRLSPVQVPGL----TDVVALSAGGYHSLAVRTDGTV 217



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 70/232 (30%), Positives = 110/232 (47%), Gaps = 14/232 (6%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + ++ G  H+L L ++ +V++ G +  G LG+G  T +  S           VV +SA  
Sbjct: 299 VALSAGYSHSLALRTDGTVWAWGYNYNGQLGNGIPTQRSPSIPVFGL---IDVVALSAGY 355

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           +H+  +   G V+  G NS    G   T   I RP  V+         ++AG + +  L 
Sbjct: 356 SHSLALRTDGTVWAWGYNSLGQLGDGTT---IPRPSPVQVPDLTDVVALSAGDSHSLALR 412

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G V   G N  GQLG G T  R +P  +  L +V   V ++AG ++ LA+  NG V++
Sbjct: 413 TDGTVRAWGVNYSGQLGDGTTTHRLSPVQVPDLTDV---VALSAGGNHTLALRTNGTVWA 469

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           +GS S+  LG G     L P  +        +VV +SAG  H +A+ + G V
Sbjct: 470 WGSNSDGQLGDGTTTPRLSPVQMLGL----TNVVALSAGYYHSLAVHTDGTV 517



 Score = 68.6 bits (166), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 110/247 (44%), Gaps = 27/247 (10%)

Query: 100 VEHSSDIVETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRIN 158
           V   +D+V  SAG         HTL L +N +V++ GS+  G LG G  T +    + + 
Sbjct: 442 VPDLTDVVALSAGGN-------HTLALRTNGTVWAWGSNSDGQLGDGTTTPR---LSPVQ 491

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN---RPIFRPRLVEALKG 215
                +VV +SA   H+  V   G V+  G NS    G   T     P+  P L + +  
Sbjct: 492 MLGLTNVVALSAGYYHSLAVHTDGTVWAWGSNSDGQLGDGTTTHRLTPVQVPGLTDVVA- 550

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
                ++AG + +  L   G V   GSN+  QLG G T  R +P  +  L +V   V ++
Sbjct: 551 -----LSAGDSHSLALRTDGTVWAWGSNSSSQLGDGTTTPRGSPVQVPGLTDV---VALS 602

Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           AG ++ LA+  +G V+++GS     LG G     L P  +            + AG  H 
Sbjct: 603 AGGAHSLALRTDGTVWAWGSNYYGQLGDGTTTPRLFPVLVSNL----TGTSNLYAGAGHS 658

Query: 336 VALDSSG 342
           +AL + G
Sbjct: 659 LALRTDG 665


>gi|313221384|emb|CBY32137.1| unnamed protein product [Oikopleura dioica]
          Length = 1586

 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 73/238 (30%), Positives = 109/238 (45%), Gaps = 9/238 (3%)

Query: 113 NMQ-ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVS--FTRINFPSAAHVVQV 168
           NMQ I  G   T L S S +V S G    G LGHG      V    + +      H+   
Sbjct: 764 NMQTIELGLNCTFLCSASGAVTSTGEGSYGRLGHGNSDDLSVPSLVSALQGFIVTHLSSS 823

Query: 169 SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
             S+ H   + +SG++FT GD      GH ++ R   RPRLVE L G        G   T
Sbjct: 824 VGSDGHTLAITESGELFTWGDGDYGKLGHGNSERQ-RRPRLVETLVGETVVDGCCGYKHT 882

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
             +T  G+++T G   +G+LGHG+T  + TP  +    +  ++V ++ G ++ LA++ +G
Sbjct: 883 AVVTATGYLYTFGYGDYGRLGHGNTTSKKTPTLV---HDCQNIVSVSCGLNHTLALSRDG 939

Query: 289 V-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVS 345
           + V++FG G    LG G       P  I      GI  V         +A++   YVS
Sbjct: 940 MTVWAFGDGDFGKLGLGNTLAVQSPNKIAALENVGIKSVHCGHQWSVFLAINGDVYVS 997


>gi|194040610|ref|XP_001928937.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1 [Sus
           scrofa]
          Length = 568

 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 95/218 (43%), Gaps = 4/218 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  +F  G++ CG LG G +    +   R++  S   +  +S  S  H       G+VFT
Sbjct: 81  NDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLSGKKIACLSYGSGPHVVLATTEGEVFT 139

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN  +    +   L      +V  G   +  LT  G V   G N  G
Sbjct: 140 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 199

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T ++P P+ +    +  +VV IA G    +AV   G VY +G   N  LG G  
Sbjct: 200 QVGSGSTANQPIPRRVTGCLQNKTVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSG 259

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            +  QP   +    +GI V RV+ G  H + L   G V
Sbjct: 260 GN--QPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQV 295



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 90/185 (48%), Gaps = 8/185 (4%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G YH+L L S+  VF+ G +  G +G G    Q +            VV ++  +
Sbjct: 172 IEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKTVVNIACGQ 231

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCG-HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             +  V+ +G+V+  G N +   G     N+P   P  + AL+G+  ++V  G   T  L
Sbjct: 232 MCSMAVVDTGEVYVWGYNGNGQLGLGSGGNQPT--PCRIAALQGIRVQRVACGYAHTLVL 289

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS--YMLAVTGNGV 289
           T  G V+  G+N++GQLG G+  ++  P  +  + E   +++IAA  S     A T  G 
Sbjct: 290 TDEGQVYAWGANSYGQLGTGNKSNQSYPTPV--IVEKDRIIEIAACHSAHTSAAKTQGGH 347

Query: 290 VYSFG 294
           VY +G
Sbjct: 348 VYMWG 352



 Score = 39.3 bits (90), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 65/145 (44%), Gaps = 6/145 (4%)

Query: 203 PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 260
           PIF     E L+ V   C   +AG N   + T+   +   G+N  G LG GD      P+
Sbjct: 49  PIFSLCSEEELQLVRQACVFGSAG-NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPR 107

Query: 261 SIAPLE-EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
            +  L  +  + +   +GP  +LA T  G V+++G  +   LG+G  +  L P  I T  
Sbjct: 108 RLDSLSGKKIACLSYGSGPHVVLATT-EGEVFTWGHNAYSQLGNGTTNHGLVPCHIST-N 165

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYV 344
                V+ V+ G  H + L S G V
Sbjct: 166 LSNKQVIEVACGSYHSLVLTSDGEV 190


>gi|443715597|gb|ELU07510.1| hypothetical protein CAPTEDRAFT_122289, partial [Capitella teleta]
          Length = 477

 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 69/228 (30%), Positives = 105/228 (46%), Gaps = 10/228 (4%)

Query: 114 MQITTGRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + I+ G  HT LL  +  VF+ G +  G LG G  T      TRI    A  V QV+   
Sbjct: 28  LHISCGDEHTSLLAGDGRVFTFGDNAWGQLGLG-HTKPVTKPTRIKSLKAEKVHQVACGR 86

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           +H     +SG++++ G N+    G    +  +  P +++ L+    K ++AG+  +  LT
Sbjct: 87  SHTLLATESGKIYSFGCNNDRQLGLGLDDEKVCSPTVIKGLESHAVKMLSAGMYHSCVLT 146

Query: 233 IRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            +G V+  G    GQLG G D     TP+ +   +E   VV IA G  +   VT  G + 
Sbjct: 147 DKGSVYLWGGGEEGQLGFGEDVTKHETPERLDVDDE---VVCIACGYYHTALVTAGGKLL 203

Query: 292 SFGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           +FG      LG G +  D   P+ +        HVV V+ G  H VA+
Sbjct: 204 TFGETDEGKLGRGSDTGDNCLPKVVDGIEG---HVVSVACGGAHTVAI 248



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 70/145 (48%), Gaps = 7/145 (4%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           V+ +S  + H + +   G+VFT GDN+      GH    +P+ +P  +++LK     QV 
Sbjct: 27  VLHISCGDEHTSLLAGDGRVFTFGDNAWGQLGLGH---TKPVTKPTRIKSLKAEKVHQVA 83

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
            G + T   T  G +++ G N   QLG G D     +P  I  LE   +V  ++AG  + 
Sbjct: 84  CGRSHTLLATESGKIYSFGCNNDRQLGLGLDDEKVCSPTVIKGLESH-AVKMLSAGMYHS 142

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQ 306
             +T  G VY +G G    LG GE 
Sbjct: 143 CVLTDKGSVYLWGGGEEGQLGFGED 167



 Score = 58.5 bits (140), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 101/227 (44%), Gaps = 13/227 (5%)

Query: 116 ITTGRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           ++ G YH+ +L    SV+  G    G LG G + T+  +  R++      VV ++    H
Sbjct: 135 LSAGMYHSCVLTDKGSVYLWGGGEEGQLGFGEDVTKHETPERLDVDD--EVVCIACGYYH 192

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG---LNFTGFL 231
            A V   G++ T G+      G          P++V+ ++G        G   +  TG+L
Sbjct: 193 TALVTAGGKLLTFGETDEGKLGRGSDTGDNCLPKVVDGIEGHVVSVACGGAHTVAITGWL 252

Query: 232 TIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
                V+T G+ + GQLGHG+ L    TP  I   ++   V   + G ++   VT  G +
Sbjct: 253 -----VYTFGNGSSGQLGHGNMLLQADTPHKIV-WQKPTKVRSASCGENHTALVTDRGQL 306

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           ++ G G +  L  GE++   Q +   + R     V +VS G  H +A
Sbjct: 307 WTCGDGRHGKLALGEENFANQFKPCHSVRFSKFVVEQVSCGGCHTLA 353



 Score = 48.1 bits (113), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 38/76 (50%)

Query: 114 MQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           + +  G  HT+ I+   V++ G+   G LGHG    Q  +  +I +     V   S  EN
Sbjct: 236 VSVACGGAHTVAITGWLVYTFGNGSSGQLGHGNMLLQADTPHKIVWQKPTKVRSASCGEN 295

Query: 174 HAAFVLQSGQVFTCGD 189
           H A V   GQ++TCGD
Sbjct: 296 HTALVTDRGQLWTCGD 311


>gi|428166922|gb|EKX35889.1| hypothetical protein GUITHDRAFT_40307, partial [Guillardia theta
           CCMP2712]
          Length = 277

 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 57/169 (33%), Positives = 85/169 (50%), Gaps = 4/169 (2%)

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
           + E H+A V + GQV+T G   S   GH D+   +  PRL+  L+  P  +V  G   T 
Sbjct: 42  SEEQHSAAVTEQGQVYTWGSGKSGQLGHGDSQNLVL-PRLIVGLQSNPIVEVACGSAHTV 100

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
            ++  G V   G    GQLG G T +   P  +  L+ V  V ++A G ++   VT +G 
Sbjct: 101 VVSKAGLVFAWGWGHFGQLGVGSTHNSNDPVQVTSLDGV-KVCKVACGSAHTAVVTESGH 159

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           VY++G G N  LGHG+  D  Q R +   +  GI+V  ++ G  H V +
Sbjct: 160 VYTWGWGVNGQLGHGD--DASQSRPMYVKKLHGIYVSTLACGLAHTVVV 206



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 96/195 (49%), Gaps = 13/195 (6%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGP--ETTQCVSFTRINFPSAAHVVQVSA 170
           +++  G  HT+++S +  VF+ G    G LG G    +   V  T ++      V +V+ 
Sbjct: 90  VEVACGSAHTVVVSKAGLVFAWGWGHFGQLGVGSTHNSNDPVQVTSLD---GVKVCKVAC 146

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
              H A V +SG V+T G   +   GH D +    RP  V+ L G+    +  GL  T  
Sbjct: 147 GSAHTAVVTESGHVYTWGWGVNGQLGHGD-DASQSRPMYVKKLHGIYVSTLACGLAHTVV 205

Query: 231 LT-IRGHVHTCGSNTHGQLGHG--DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           ++ +   V + G + +GQLGHG  D       +S  P++++    QIA G SY LA++  
Sbjct: 206 VSEVDRAVFSWGWDEYGQLGHGGWDIFGGNKNRSPRPIKDL---QQIACGSSYTLALSSR 262

Query: 288 GVVYSFGSGSNFCLG 302
           G VY+FG G +  LG
Sbjct: 263 GDVYAFGWGKDGQLG 277



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 62/220 (28%), Positives = 96/220 (43%), Gaps = 16/220 (7%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
           V++ GS   G LGHG      +    +   S   +V+V+    H   V ++G VF  G  
Sbjct: 56  VYTWGSGKSGQLGHGDSQNLVLPRLIVGLQSNP-IVEVACGSAHTVVVSKAGLVFAWGWG 114

Query: 191 SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH 250
                G   T+     P  V +L GV   +V  G   T  +T  GHV+T G   +GQLGH
Sbjct: 115 HFGQLGVGSTHNS-NDPVQVTSLDGVKVCKVACGSAHTAVVTESGHVYTWGWGVNGQLGH 173

Query: 251 GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG-NGVVYSFGSGSNFCLGHGEQ--- 306
           GD   +  P  +  L  +  V  +A G ++ + V+  +  V+S+G      LGHG     
Sbjct: 174 GDDASQSRPMYVKKLHGI-YVSTLACGLAHTVVVSEVDRAVFSWGWDEYGQLGHGGWDIF 232

Query: 307 --HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             +    PR I+  +       +++ G  + +AL S G V
Sbjct: 233 GGNKNRSPRPIKDLQ-------QIACGSSYTLALSSRGDV 265


>gi|348676014|gb|EGZ15832.1| hypothetical protein PHYSODRAFT_315997 [Phytophthora sojae]
          Length = 614

 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 111/237 (46%), Gaps = 7/237 (2%)

Query: 106 IVETSAGNMQITTG--RYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA 162
           +VE  AG      G   +HT +++ N  +++CG +  G LG G      +    + +   
Sbjct: 166 LVEELAGKRVADVGCSYFHTAIVMDNGDLYACGCNDYGQLGLGDHRNGELVPRPVEYFFR 225

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRP-RLVEALKGVPCKQV 221
             V+ V+  +++    L+ G V   G N     G   T+ P+ +P RL   L  +   Q+
Sbjct: 226 RPVLAVACGQHYTIASLRDGGVVAFGKNDHGQLGLDSTSEPVSQPTRLAAPLDRLVVPQL 285

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
           + G + T  +T  G V+T G N +GQLG G  +    P  +  L  +  + Q+A G  + 
Sbjct: 286 SCGYHHTAVVTEDGAVYTFGRNDYGQLGLGHKMHMARPARVESLARM-RITQVACGCYHT 344

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           L ++ +G V+ FG  ++  LG     D L P+ I T R K   V +V+AG  H V L
Sbjct: 345 LVLSDDGKVFPFGRNNHGQLGLETSVDCLSPQLISTLRNK--TVTKVAAGFYHSVCL 399



 Score = 74.7 bits (182), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 66/223 (29%), Positives = 102/223 (45%), Gaps = 8/223 (3%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L +N ++++ G ++ G LG G  TT  +  T +   +   V  V  S  H A V+ +G +
Sbjct: 136 LHANGNLYTVGFNMRGQLGLGSSTT-VMEATLVEELAGKRVADVGCSYFHTAIVMDNGDL 194

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
           + CG N     G  D       PR VE     P   V  G ++T      G V   G N 
Sbjct: 195 YACGCNDYGQLGLGDHRNGELVPRPVEYFFRRPVLAVACGQHYTIASLRDGGVVAFGKND 254

Query: 245 HGQLGHGDT---LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 301
           HGQLG   T   + +PT +  APL+ +  V Q++ G  +   VT +G VY+FG      L
Sbjct: 255 HGQLGLDSTSEPVSQPT-RLAAPLDRL-VVPQLSCGYHHTAVVTEDGAVYTFGRNDYGQL 312

Query: 302 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G G +    +P  +++  R  + + +V+ G  H + L   G V
Sbjct: 313 GLGHKMHMARPARVESLAR--MRITQVACGCYHTLVLSDDGKV 353



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 95/221 (42%), Gaps = 27/221 (12%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH---VVQVSASENHAAFVLQSGQVFTC 187
           V+S G +  G L  G +TT   +  R++  ++ H   VV V+      A + + G V+TC
Sbjct: 33  VYSFGQNTYGELALG-DTTDRSAPIRVDLGNSNHGRRVVDVACGNEQTAILFEDGDVYTC 91

Query: 188 GDNSSFCCGHRDTNR-PIFR-------PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
           G N S  C    T R P  R        R V    G   + + A       L   G+++T
Sbjct: 92  GYNDSGQCAIGTTERVPTLRFSPGLSSNRTVRIFSGNGSEHLAA-------LHANGNLYT 144

Query: 240 CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM--LAVTGNGVVYSFGSGS 297
            G N  GQLG G +    T      +EE+        G SY     V  NG +Y+ G   
Sbjct: 145 VGFNMRGQLGLGSS---TTVMEATLVEELAGKRVADVGCSYFHTAIVMDNGDLYACGCND 201

Query: 298 NFCLGHGEQHD-ELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
              LG G+  + EL PR ++ F R+   V+ V+ G  + +A
Sbjct: 202 YGQLGLGDHRNGELVPRPVEYFFRR--PVLAVACGQHYTIA 240


>gi|47212900|emb|CAF90790.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 2131

 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 74/273 (27%), Positives = 124/273 (45%), Gaps = 45/273 (16%)

Query: 115  QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I  N +V +CG    G LG G  +      T I+      V Q+     
Sbjct: 1156 QVVCGQNCTFVIQPNGTVLACGEGSYGRLGQG-NSDDLHVLTVISALQGFVVTQLVTSCG 1214

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVP------------- 217
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G               
Sbjct: 1215 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQVGRGRAAGAG 1273

Query: 218  -CK---------QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE- 266
             C+         Q++ G   +  +T  G + T G+  +G+LG G+T ++  P+ +A LE 
Sbjct: 1274 LCRCRSHLHLRLQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVAALEG 1333

Query: 267  -EVGSVVQIAAGPSYMLAVTGNG-VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK--- 321
             ++G V  +A G ++ L V+ +G +V++FG G    LG G    +  P+      +    
Sbjct: 1334 YQIGQVANVACGLNHTLVVSADGMMVWAFGDGDYGKLGLGNSTAKSSPQVWAVILQSPTL 1393

Query: 322  ----------GIHVVRVSAGDEHVVALDSSGYV 344
                      GI + +V+ G +  VAL   G V
Sbjct: 1394 CQELKVDVLCGISIKKVACGTQFSVALTKDGRV 1426



 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 70/264 (26%), Positives = 114/264 (43%), Gaps = 44/264 (16%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGP----------ETTQCVSFTRINFPSAAHV----- 165
            H++ ++ S  VFS G    G LGHG           E  Q     ++    AA       
Sbjct: 1218 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQVGRGRAAGAGLCRC 1277

Query: 166  -------VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
                   +Q+S    H+A V   G++FT G+      G  +T+     P  V AL+G   
Sbjct: 1278 RSHLHLRLQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKL-PERVAALEGYQI 1336

Query: 219  KQVT---AGLNFTGFLTIRGH-VHTCGSNTHGQLGHGDTLDRPTPKSIAPL-------EE 267
             QV     GLN T  ++  G  V   G   +G+LG G++  + +P+  A +       +E
Sbjct: 1337 GQVANVACGLNHTLVVSADGMMVWAFGDGDYGKLGLGNSTAKSSPQVWAVILQSPTLCQE 1396

Query: 268  VG-------SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR 320
            +        S+ ++A G  + +A+T +G V++FG      L      +  +P+ +     
Sbjct: 1397 LKVDVLCGISIKKVACGTQFSVALTKDGRVFTFGQDRLIGLPESRARNHNRPQQLPAL-- 1454

Query: 321  KGIHVVRVSAGDEHVVALDSSGYV 344
             G+HV  V+ G EH +AL S+G V
Sbjct: 1455 SGVHVQDVAVGAEHTLALSSTGDV 1478



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/115 (32%), Positives = 58/115 (50%), Gaps = 4/115 (3%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE--VGSVVQIAA 276
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 1155 QQVVCGQNCTFVIQPNGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 1214

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
               + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV+V  G
Sbjct: 1215 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQVGRG 1267



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 65/247 (26%), Positives = 101/247 (40%), Gaps = 31/247 (12%)

Query: 114  MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 165
            +Q++ G  H+ +++ +  +F+ G+   G LG G       PE    +   +I       V
Sbjct: 1285 LQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVAALEGYQI-----GQV 1339

Query: 166  VQVSASENHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRP-------IFRPRLVEALK- 214
              V+   NH   V   G +   F  GD      G+             +  P L + LK 
Sbjct: 1340 ANVACGLNHTLVVSADGMMVWAFGDGDYGKLGLGNSTAKSSPQVWAVILQSPTLCQELKV 1399

Query: 215  ----GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 270
                G+  K+V  G  F+  LT  G V T G +    L      +   P+ +  L  V  
Sbjct: 1400 DVLCGISIKKVACGTQFSVALTKDGRVFTFGQDRLIGLPESRARNHNRPQQLPALSGV-H 1458

Query: 271  VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
            V  +A G  + LA++  G VY++GS S   LG G  +   +P  +   + K IH  +VSA
Sbjct: 1459 VQDVAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVREPTVVTMLQGKHIH--QVSA 1516

Query: 331  GDEHVVA 337
            G  H  A
Sbjct: 1517 GRCHSAA 1523


>gi|328870950|gb|EGG19322.1| regulator of chromosome condensation domain-containing protein
            [Dictyostelium fasciculatum]
          Length = 2003

 Score = 80.5 bits (197), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 70/248 (28%), Positives = 107/248 (43%), Gaps = 18/248 (7%)

Query: 114  MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            M ++ G  HT++I  S  ++S G+   G LGHG  T   +   RI   +   +  ++   
Sbjct: 1251 MMMSLGGEHTVVIDRSFHIYSWGNGKYGQLGHGVSTPHNLP-KRIEEFAGQKISSIATGY 1309

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK----GVPCK--QVTAGLN 226
             H   +   G +F  G N     G  D    +  P  V        G P +   +  G +
Sbjct: 1310 WHTLVLRSGGDLFAFGSNEHGQLGLNDLKHHLPIPTRVNTADIHHAGQPTRVTGIFCGHS 1369

Query: 227  FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
             +   T  G V++ G+N  GQLGHG T     PK I  L+   ++ +I  GP + +  T 
Sbjct: 1370 HSVLRTSHGDVYSFGANAKGQLGHGSTESCRYPKLIQGLKG-KNIKRITCGPYHTVVTTD 1428

Query: 287  NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-------D 339
               VY +G G + CLG G   +EL P+ ++ F  K   V RV  G  H   L       +
Sbjct: 1429 LDSVYCWGQGEHMCLGTGSNKNELVPKLVELFVNK--RVERVVCGLYHTATLTQPMGDSN 1486

Query: 340  SSGYVSLC 347
            + G V +C
Sbjct: 1487 TGGNVYIC 1494



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 61/213 (28%), Positives = 99/213 (46%), Gaps = 16/213 (7%)

Query: 116  ITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H++L  S+  V+S G++  G LGHG  T  C     I      ++ +++    H
Sbjct: 1364 IFCGHSHSVLRTSHGDVYSFGANAKGQLGHG-STESCRYPKLIQGLKGKNIKRITCGPYH 1422

Query: 175  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT-- 232
                     V+  G     C G   +N+    P+LVE       ++V  GL  T  LT  
Sbjct: 1423 TVVTTDLDSVYCWGQGEHMCLG-TGSNKNELVPKLVELFVNKRVERVVCGLYHTATLTQP 1481

Query: 233  -----IRGHVHTCGSNTHGQLGHGD-----TLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
                   G+V+ CGS+ HG+LG G      +LD+  P +I P     +VV +A+G  +  
Sbjct: 1482 MGDSNTGGNVYICGSSEHGKLGIGGDPRSPSLDKAYP-AIIPSINSANVVDLASGAEFNA 1540

Query: 283  AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAI 315
             +T NG +Y +G+G++  +G+G+  D   P  +
Sbjct: 1541 LITSNGALYMWGAGTHGQIGNGKNQDTWIPTRV 1573



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 58/198 (29%), Positives = 87/198 (43%), Gaps = 22/198 (11%)

Query: 164  HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVT 222
            H   VS    HAA +   G++FT G+N+S   GH     +    P  VE+LK  P   ++
Sbjct: 1195 HAKSVSCGWEHAAVITVDGELFTWGNNTSGQLGHGLAAGKHQSTPMRVESLKQTPIMMMS 1254

Query: 223  AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG--SVVQIAAGPSY 280
             G   T  +    H+++ G+  +GQLGHG +     PK I   EE     +  IA G  +
Sbjct: 1255 LGGEHTVVIDRSFHIYSWGNGKYGQLGHGVSTPHNLPKRI---EEFAGQKISSIATGYWH 1311

Query: 281  MLAVTGNGVVYSFGSGSNFCLGHGE--QHDELQPR--------AIQTFRRKGI------H 324
             L +   G +++FGS  +  LG  +   H  +  R        A Q  R  GI       
Sbjct: 1312 TLVLRSGGDLFAFGSNEHGQLGLNDLKHHLPIPTRVNTADIHHAGQPTRVTGIFCGHSHS 1371

Query: 325  VVRVSAGDEHVVALDSSG 342
            V+R S GD +    ++ G
Sbjct: 1372 VLRTSHGDVYSFGANAKG 1389


>gi|326914164|ref|XP_003203397.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Meleagris
           gallopavo]
          Length = 567

 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 98/221 (44%), Gaps = 4/221 (1%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQ 183
           +  N  VF  G +  G LG G +    +   R++      +  +S  S  H     + G+
Sbjct: 78  VTENDEVFVLGMNCSGCLGTG-DVQSTIEPKRLDSLCGKKIACLSYGSGPHVVLATEEGE 136

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           V+T G N+    G+  TN  +   ++   L      +V  G + +  LT  G V+T G N
Sbjct: 137 VYTWGHNAYSQLGNGTTNHGLVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTWGYN 196

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 303
             GQ+G G T ++P P+ +    +   VV IA G    +AV  NG VY +G   N  LG 
Sbjct: 197 NSGQVGSGSTANQPIPRRVTSCLQNKVVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGL 256

Query: 304 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G   +  QP   +    +GI V RV+ G  H + L   G +
Sbjct: 257 GSSGN--QPTPCRIAALQGIRVQRVACGCAHTLVLTDEGQI 295



 Score = 58.2 bits (139), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 95/185 (51%), Gaps = 8/185 (4%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G +H++ L S+  V++ G +  G +G G    Q +     +      VV ++  +
Sbjct: 172 IEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKVVVNIACGQ 231

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             +  V+++G+V+  G N +   G   + N+P   P  + AL+G+  ++V  G   T  L
Sbjct: 232 MCSMAVVENGEVYVWGYNGNGQLGLGSSGNQPT--PCRIAALQGIRVQRVACGCAHTLVL 289

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS--YMLAVTGNGV 289
           T  G ++  G+N++GQLG G+  ++  P ++   ++   V++IAA  S     A T +G 
Sbjct: 290 TDEGQIYAWGANSYGQLGTGNKSNQSYPTTVTVDKD--RVIEIAACHSAHTSAAKTQSGQ 347

Query: 290 VYSFG 294
           VY +G
Sbjct: 348 VYMWG 352


>gi|118084855|ref|XP_417055.2| PREDICTED: RCC1 and BTB domain-containing protein 2 [Gallus gallus]
          Length = 566

 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 98/221 (44%), Gaps = 4/221 (1%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQ 183
           +  N  VF  G +  G LG G +    +   R++      +  +S  S  H     + G+
Sbjct: 77  VTENDEVFVLGMNCSGCLGTG-DIQSTIEPKRLDSLCGKKIACLSYGSGPHVVLATEEGE 135

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           V+T G N+    G+  TN  +   ++   L      +V  G + +  LT  G V+T G N
Sbjct: 136 VYTWGHNAYSQLGNGTTNHGLVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTWGYN 195

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 303
             GQ+G G T ++P P+ +    +   VV IA G    +AV  NG VY +G   N  LG 
Sbjct: 196 NSGQVGSGSTANQPIPRRVTSCLQNKVVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGL 255

Query: 304 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G   ++  P  I     +GI V RV+ G  H + L   G +
Sbjct: 256 GSSGNQPTPCRIAAL--QGIRVQRVACGCAHTLVLTDEGQI 294



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 95/185 (51%), Gaps = 8/185 (4%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G +H++ L S+  V++ G +  G +G G    Q +     +      VV ++  +
Sbjct: 171 IEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKVVVNIACGQ 230

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             +  V+++G+V+  G N +   G   + N+P   P  + AL+G+  ++V  G   T  L
Sbjct: 231 MCSMAVVENGEVYVWGYNGNGQLGLGSSGNQPT--PCRIAALQGIRVQRVACGCAHTLVL 288

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS--YMLAVTGNGV 289
           T  G ++  G+N++GQLG G+  ++  P ++   ++   VV+IAA  S     A T +G 
Sbjct: 289 TDEGQIYAWGANSYGQLGTGNKSNQSYPTTVTVDKD--RVVEIAACHSAHTSAAKTQSGQ 346

Query: 290 VYSFG 294
           VY +G
Sbjct: 347 VYMWG 351


>gi|422295033|gb|EKU22332.1| phosphatidylinositide phosphatase sac1 [Nannochloropsis gaditana
           CCMP526]
          Length = 1021

 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 70/244 (28%), Positives = 114/244 (46%), Gaps = 26/244 (10%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINF-PSAAHV-----------------V 166
           ++ ++ VF+ G    G LGH P     ++   +   P    +                 V
Sbjct: 631 IVPSTRVFAWGQGTEGQLGHSPIQKSALTGAYVELSPRELRLDTEQDQQKIEKHNPWGFV 690

Query: 167 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
            ++A  N++A V + G+++T GD S+   GH D+ +P++RPR VEAL+ V   +V  G  
Sbjct: 691 DLAAGLNYSAGVTEDGKLYTWGDGSNHKLGHGDS-KPVYRPRQVEALQDVKIVKVACGDF 749

Query: 227 FTGFLTIRGHVHTCG-----SNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSY 280
            T  +   G + T G         G LGHGD  ++P PK +  L + G  V  +A G  +
Sbjct: 750 HTAAIDEDGRLWTWGWGGSLFGGIGGLGHGDEAEQPRPKVVRSLVDYGCRVGSVACGEKH 809

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            L +T +G V + G+G    LG+G   D   P  ++ F  K  ++V V+AG    + L  
Sbjct: 810 TLILTDDGEVLTAGNGEYGRLGNGGSSDHGVPEPVELFDEK-TNIVEVAAGHAFNLVLTQ 868

Query: 341 SGYV 344
            G +
Sbjct: 869 DGKI 872



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/241 (22%), Positives = 105/241 (43%), Gaps = 19/241 (7%)

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           Y   +  +  +++ G      LGHG ++       ++       +V+V+  + H A + +
Sbjct: 698 YSAGVTEDGKLYTWGDGSNHKLGHG-DSKPVYRPRQVEALQDVKIVKVACGDFHTAAIDE 756

Query: 181 SGQVFTCG------DNSSFCCGHRDTNRPIFRPRLVEALKGVPCK--QVTAGLNFTGFLT 232
            G+++T G                +  +P  RP++V +L    C+   V  G   T  LT
Sbjct: 757 DGRLWTWGWGGSLFGGIGGLGHGDEAEQP--RPKVVRSLVDYGCRVGSVACGEKHTLILT 814

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G V T G+  +G+LG+G + D   P+ +   +E  ++V++AAG ++ L +T +G +++
Sbjct: 815 DDGEVLTAGNGEYGRLGNGGSSDHGVPEPVELFDEKTNIVEVAAGHAFNLVLTQDGKIFT 874

Query: 293 FGSGS------NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSL 346
           +G            +       E  P  ++    K   VV V+AG  H  A+   G + +
Sbjct: 875 WGRNEQGQLGLGGGISMDVYSMEAVPLLVEALESK--KVVHVAAGHSHSAAVTEEGELYM 932

Query: 347 C 347
            
Sbjct: 933 W 933



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 61/235 (25%), Positives = 99/235 (42%), Gaps = 30/235 (12%)

Query: 116  ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            +  G  HTL++++   V + G+   G LG+G  +   V      F    ++V+V+A    
Sbjct: 803  VACGEKHTLILTDDGEVLTAGNGEYGRLGNGGSSDHGVPEPVELFDEKTNIVEVAAGHAF 862

Query: 175  AAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
               + Q G++FT G N     G       D       P LVEAL+      V AG + + 
Sbjct: 863  NLVLTQDGKIFTWGRNEQGQLGLGGGISMDVYSMEAVPLLVEALESKKVVHVAAGHSHSA 922

Query: 230  FLTIRGHVHTCGSNTHGQ-----LGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             +T  G ++  G   H +     +G GD                  V Q+  G S+   V
Sbjct: 923  AVTEEGELYMWGMKIHLEPQVFRVGEGD-----------------KVWQVGCGGSHTAVV 965

Query: 285  TGNG-VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            T +   +++FG GS+ CLGHG +     P+ +      G  VV+V+ G  H+  +
Sbjct: 966  TEDAHQLFTFGKGSSLCLGHGTRSYTPHPKLVAD-GLAGRGVVKVACGHRHMAVI 1019



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 64/156 (41%), Gaps = 28/156 (17%)

Query: 213 LKGVPC-KQVTAGLNFTGFLTIRGH-------VHTCGSNTHGQLGHGDT----------- 253
           L+GVP   +V     F+       H       V   G  T GQLGH              
Sbjct: 605 LRGVPAVARVRQSTTFSTLSATSSHTIVPSTRVFAWGQGTEGQLGHSPIQKSALTGAYVE 664

Query: 254 -------LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
                  LD    +           V +AAG +Y   VT +G +Y++G GSN  LGHG+ 
Sbjct: 665 LSPRELRLDTEQDQQKIEKHNPWGFVDLAAGLNYSAGVTEDGKLYTWGDGSNHKLGHGDS 724

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
               +PR ++    + + +V+V+ GD H  A+D  G
Sbjct: 725 KPVYRPRQVEAL--QDVKIVKVACGDFHTAAIDEDG 758


>gi|332218229|ref|XP_003258261.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Nomascus leucogenys]
          Length = 979

 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIVQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   +        +QV+A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 107/226 (47%), Gaps = 7/226 (3%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLVGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGV 263



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 95/213 (44%), Gaps = 9/213 (4%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           P+ +++    GI  ++V+AG  H   L  SG +
Sbjct: 181 PQLLKSLV--GIPFMQVAAGGAHSFVLTLSGAI 211


>gi|357613847|gb|EHJ68745.1| hypothetical protein KGM_02265 [Danaus plexippus]
          Length = 1039

 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 69/270 (25%), Positives = 128/270 (47%), Gaps = 13/270 (4%)

Query: 81  ELLNRCNGNWKRVLR-FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSS-VFSCGSSL 138
           EL   C GN   V++  L   + SS I        QI+ G +HTL +SN+  +++CGS+ 
Sbjct: 11  ELCIECPGNLDLVIKPTLSKWKESSHI-------QQISAGEFHTLYLSNNGHLYTCGSNE 63

Query: 139 CGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHR 198
            G LG    +    S   ++      +  ++    H+  + + GQ F+ G +S    G  
Sbjct: 64  VGQLGRQTNSADGTSPVLVDTFKGCTLSTIACGLQHSMALDEWGQPFSWGSDSMGQLGSN 123

Query: 199 DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP- 257
             +    +P++++ L      QV  G   T  LT  G ++  G+N++GQ G G+  ++  
Sbjct: 124 LGSHAQDKPKIIKTLATKNVIQVACGSYHTVVLTNNGDLYAWGANSYGQCGLGNRSNKET 183

Query: 258 TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQT 317
           TP++++ +  +  +  IA G ++  A++ +G V+ +G  S+  LG  ++     P  ++T
Sbjct: 184 TPQALSSILGI-PIALIACGSNHTFALSQSGAVFGWGKNSHGQLGLQDRESRCYPTHLKT 242

Query: 318 FRRKGIHVVRVSAGDEHVVALDSSGYVSLC 347
            R   + V  +S G++    L   G V  C
Sbjct: 243 LR--NVKVCHISCGEDFTAFLTLDGGVFTC 270



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 63/222 (28%), Positives = 98/222 (44%), Gaps = 4/222 (1%)

Query: 116 ITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G  H++ +      FS GS   G LG    +        I   +  +V+QV+    H
Sbjct: 93  IACGLQHSMALDEWGQPFSWGSDSMGQLGSNLGSHAQDKPKIIKTLATKNVIQVACGSYH 152

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              +  +G ++  G NS   CG  + +     P+ + ++ G+P   +  G N T  L+  
Sbjct: 153 TVVLTNNGDLYAWGANSYGQCGLGNRSNKETTPQALSSILGIPIALIACGSNHTFALSQS 212

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G V   G N+HGQLG  D   R  P  +  L  V  V  I+ G  +   +T +G V++ G
Sbjct: 213 GAVFGWGKNSHGQLGLQDRESRCYPTHLKTLRNV-KVCHISCGEDFTAFLTLDGGVFTCG 271

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
           +G     GHG   DEL PR +      G  V +V+ G  H++
Sbjct: 272 AGEYGQTGHGNTKDELVPRKVMELM--GSTVTQVACGRRHML 311


>gi|222619121|gb|EEE55253.1| hypothetical protein OsJ_03147 [Oryza sativa Japonica Group]
          Length = 954

 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 111/231 (48%), Gaps = 20/231 (8%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVS-FTRINFPS--- 161
           + +  G +H+ L ++S  +++ G    GVLGHG       P+  + +S F  I       
Sbjct: 366 LSVACGSWHSALTTSSGKLYTFGDGTFGVLGHGDRETLAYPKEVEALSGFKTIKVACGIW 425

Query: 162 -AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
            +A +V+V+   N     + S +++T GD      GH D   P   P+ V+AL      Q
Sbjct: 426 HSAAIVEVT---NQTGANVMSKKLYTWGDGDKNRLGHGD-KEPRLVPKCVQALLEYNFHQ 481

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           +  G N T  L   G V T GS+++GQLG+  + D   P  +        V +I+ G S+
Sbjct: 482 LACGHNMTVALATSGRVFTMGSSSNGQLGNPKS-DGKQPCLVQDRLASELVEEISCGASH 540

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
           +  +T    VY++G G+N  LGHG+  D  +P  ++  + +  HV  +S G
Sbjct: 541 VTVLTSRSEVYTWGMGANGRLGHGDLKDRKKPCLVEALKDR--HVKSISCG 589



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 73/253 (28%), Positives = 106/253 (41%), Gaps = 37/253 (14%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVV 166
           QI  G  H  L +    VF+ G    G LGHG       P+  + +S T ++        
Sbjct: 260 QIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDADISRPKLVESLSLTVVDL------- 312

Query: 167 QVSASENHAAFVLQSGQVFTCGDNSS----FCCGHRDTNRPIFRPRLVEA-LKGVPCKQV 221
            +S  E H   V  SG +F  GD S       CG   T    + P+ V   L+G+    V
Sbjct: 313 -ISCGEFHTCAVTTSGDLFNWGDGSYNVGLLGCG---TEVSYWLPKKVSGPLEGLQVLSV 368

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
             G   +   T  G ++T G  T G LGHGD      PK +  L      +++A G  + 
Sbjct: 369 ACGSWHSALTTSSGKLYTFGDGTFGVLGHGDRETLAYPKEVEALSGF-KTIKVACGIWHS 427

Query: 282 LAV------TGNGVV----YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
            A+      TG  V+    Y++G G    LGHG++   L P+ +Q       H  +++ G
Sbjct: 428 AAIVEVTNQTGANVMSKKLYTWGDGDKNRLGHGDKEPRLVPKCVQALLEYNFH--QLACG 485

Query: 332 DEHVVALDSSGYV 344
               VAL +SG V
Sbjct: 486 HNMTVALATSGRV 498



 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 52/177 (29%), Positives = 86/177 (48%), Gaps = 7/177 (3%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++    H A   + G+VFT G+      GH  T+  I RP+LVE+L       ++ G
Sbjct: 258 VNQIACGTRHVALTTRQGEVFTWGEEFGGRLGH-GTDADISRPKLVESLSLTVVDLISCG 316

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
              T  +T  G +   G  ++  G LG G  +    PK ++ PLE +  V+ +A G  + 
Sbjct: 317 EFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWLPKKVSGPLEGL-QVLSVACGSWHS 375

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
              T +G +Y+FG G+   LGHG++     P+ ++     G   ++V+ G  H  A+
Sbjct: 376 ALTTSSGKLYTFGDGTFGVLGHGDRETLAYPKEVEAL--SGFKTIKVACGIWHSAAI 430



 Score = 47.4 bits (111), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 65/141 (46%), Gaps = 4/141 (2%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  P+ +E+   +   Q+  G       T +G V T G    G+LGHG   D   PK + 
Sbjct: 244 VLIPKPLESDVVLDVNQIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDADISRPKLVE 303

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRK 321
            L  +  V  I+ G  +  AVT +G ++++G GS     LG G +     P+ + +   +
Sbjct: 304 SL-SLTVVDLISCGEFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWLPKKV-SGPLE 361

Query: 322 GIHVVRVSAGDEHVVALDSSG 342
           G+ V+ V+ G  H     SSG
Sbjct: 362 GLQVLSVACGSWHSALTTSSG 382


>gi|115439409|ref|NP_001043984.1| Os01g0700200 [Oryza sativa Japonica Group]
 gi|56784719|dbj|BAD81868.1| zinc finger protein-like [Oryza sativa Japonica Group]
 gi|56785284|dbj|BAD82210.1| zinc finger protein-like [Oryza sativa Japonica Group]
 gi|113533515|dbj|BAF05898.1| Os01g0700200 [Oryza sativa Japonica Group]
 gi|215704825|dbj|BAG94853.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 1044

 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 111/231 (48%), Gaps = 20/231 (8%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVS-FTRINFPS--- 161
           + +  G +H+ L ++S  +++ G    GVLGHG       P+  + +S F  I       
Sbjct: 366 LSVACGSWHSALTTSSGKLYTFGDGTFGVLGHGDRETLAYPKEVEALSGFKTIKVACGIW 425

Query: 162 -AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
            +A +V+V+   N     + S +++T GD      GH D   P   P+ V+AL      Q
Sbjct: 426 HSAAIVEVT---NQTGANVMSKKLYTWGDGDKNRLGHGD-KEPRLVPKCVQALLEYNFHQ 481

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           +  G N T  L   G V T GS+++GQLG+  + D   P  +        V +I+ G S+
Sbjct: 482 LACGHNMTVALATSGRVFTMGSSSNGQLGNPKS-DGKQPCLVQDRLASELVEEISCGASH 540

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
           +  +T    VY++G G+N  LGHG+  D  +P  ++  + +  HV  +S G
Sbjct: 541 VTVLTSRSEVYTWGMGANGRLGHGDLKDRKKPCLVEALKDR--HVKSISCG 589



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 73/253 (28%), Positives = 106/253 (41%), Gaps = 37/253 (14%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVV 166
           QI  G  H  L +    VF+ G    G LGHG       P+  + +S T ++        
Sbjct: 260 QIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDADISRPKLVESLSLTVVDL------- 312

Query: 167 QVSASENHAAFVLQSGQVFTCGDNSS----FCCGHRDTNRPIFRPRLVEA-LKGVPCKQV 221
            +S  E H   V  SG +F  GD S       CG   T    + P+ V   L+G+    V
Sbjct: 313 -ISCGEFHTCAVTTSGDLFNWGDGSYNVGLLGCG---TEVSYWLPKKVSGPLEGLQVLSV 368

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
             G   +   T  G ++T G  T G LGHGD      PK +  L      +++A G  + 
Sbjct: 369 ACGSWHSALTTSSGKLYTFGDGTFGVLGHGDRETLAYPKEVEALSGF-KTIKVACGIWHS 427

Query: 282 LAV------TGNGVV----YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
            A+      TG  V+    Y++G G    LGHG++   L P+ +Q       H  +++ G
Sbjct: 428 AAIVEVTNQTGANVMSKKLYTWGDGDKNRLGHGDKEPRLVPKCVQALLEYNFH--QLACG 485

Query: 332 DEHVVALDSSGYV 344
               VAL +SG V
Sbjct: 486 HNMTVALATSGRV 498



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/177 (29%), Positives = 86/177 (48%), Gaps = 7/177 (3%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++    H A   + G+VFT G+      GH  T+  I RP+LVE+L       ++ G
Sbjct: 258 VNQIACGTRHVALTTRQGEVFTWGEEFGGRLGH-GTDADISRPKLVESLSLTVVDLISCG 316

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
              T  +T  G +   G  ++  G LG G  +    PK ++ PLE +  V+ +A G  + 
Sbjct: 317 EFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWLPKKVSGPLEGL-QVLSVACGSWHS 375

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
              T +G +Y+FG G+   LGHG++     P+ ++     G   ++V+ G  H  A+
Sbjct: 376 ALTTSSGKLYTFGDGTFGVLGHGDRETLAYPKEVEAL--SGFKTIKVACGIWHSAAI 430



 Score = 47.0 bits (110), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 66/143 (46%), Gaps = 4/143 (2%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  P+ +E+   +   Q+  G       T +G V T G    G+LGHG   D   PK + 
Sbjct: 244 VLIPKPLESDVVLDVNQIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDADISRPKLVE 303

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRK 321
            L  +  V  I+ G  +  AVT +G ++++G GS     LG G +     P+ + +   +
Sbjct: 304 SL-SLTVVDLISCGEFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWLPKKV-SGPLE 361

Query: 322 GIHVVRVSAGDEHVVALDSSGYV 344
           G+ V+ V+ G  H     SSG +
Sbjct: 362 GLQVLSVACGSWHSALTTSSGKL 384


>gi|66826123|ref|XP_646416.1| regulator of chromosome condensation  domain-containing protein
            [Dictyostelium discoideum AX4]
 gi|60474380|gb|EAL72317.1| regulator of chromosome condensation  domain-containing protein
            [Dictyostelium discoideum AX4]
          Length = 2044

 Score = 80.5 bits (197), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 66/235 (28%), Positives = 100/235 (42%), Gaps = 54/235 (22%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
            S + VV VS    H A V  +G++ T G   +   GH DTN  I  P+++++L      Q
Sbjct: 802  SLSDVVSVSIGFCHGAAVRANGELLTWGVGENGQLGHGDTNNQI-EPKIIQSLTSFWITQ 860

Query: 221  VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
            V  G   T  LT  G V++ G++ +GQLG GD     +P  ++ LE+  +V+QIA+G ++
Sbjct: 861  VQCGEKHTICLTKNGKVYSWGASEYGQLGLGDVTQHSSPMQVSALEKY-NVLQIASGSTH 919

Query: 281  MLAVT--------GNGV----------------------------------------VYS 292
               +T        GNG                                         VY+
Sbjct: 920  CAVLTTSKEVLVFGNGAAMGAASVVSLPTLVPSLKYLHIDRLCCGHYSTAAITECGDVYT 979

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSLC 347
            +G+G    LGHG    E  P+ I+  R + I   ++S G  H   L  SG +  C
Sbjct: 980  WGTGQE--LGHGGNSTETSPKLIEALRNQSIR--QISCGGRHTAFLTDSGRIFTC 1030



 Score = 72.0 bits (175), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 57/216 (26%), Positives = 93/216 (43%), Gaps = 49/216 (22%)

Query: 115  QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
            Q+  G  HT+ L  N  V+S G+S  G LG G + TQ  S  +++     +V+Q+++   
Sbjct: 860  QVQCGEKHTICLTKNGKVYSWGASEYGQLGLG-DVTQHSSPMQVSALEKYNVLQIASGST 918

Query: 174  HAAFVLQSGQVFTCGDNSS-----------------------FCCGHRDT---------- 200
            H A +  S +V   G+ ++                        CCGH  T          
Sbjct: 919  HCAVLTTSKEVLVFGNGAAMGAASVVSLPTLVPSLKYLHIDRLCCGHYSTAAITECGDVY 978

Query: 201  ------------NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 248
                        N     P+L+EAL+    +Q++ G   T FLT  G + TCG ++ GQL
Sbjct: 979  TWGTGQELGHGGNSTETSPKLIEALRNQSIRQISCGGRHTAFLTDSGRIFTCGKDSFGQL 1038

Query: 249  GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
            G     D+  PK I  L +  + + ++ G +Y +A+
Sbjct: 1039 GQMSG-DQNKPKRIESLTKT-TFISVSCGENYNVAL 1072



 Score = 51.2 bits (121), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 25/80 (31%), Positives = 46/80 (57%), Gaps = 2/80 (2%)

Query: 265 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
           LE +  VV ++ G  +  AV  NG + ++G G N  LGHG+ +++++P+ IQ+       
Sbjct: 800 LESLSDVVSVSIGFCHGAAVRANGELLTWGVGENGQLGHGDTNNQIEPKIIQSL--TSFW 857

Query: 325 VVRVSAGDEHVVALDSSGYV 344
           + +V  G++H + L  +G V
Sbjct: 858 ITQVQCGEKHTICLTKNGKV 877


>gi|449523373|ref|XP_004168698.1| PREDICTED: uncharacterized protein LOC101228735, partial [Cucumis
           sativus]
          Length = 958

 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 70/249 (28%), Positives = 112/249 (44%), Gaps = 28/249 (11%)

Query: 114 MQITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G +H+ L  SN  +++ G    GVLGHG    + V + R +   S    ++V+  
Sbjct: 238 LSVACGTWHSALATSNGKLYTFGDGTYGVLGHGDR--ESVVYPREVQLLSGLRTIKVACG 295

Query: 172 ENHAAFVLQ----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
             H A +++          S ++FT GD   +  GH +    +  P  V +L      Q+
Sbjct: 296 VWHTAAIVEVMSQTGSNMSSRKLFTWGDGDKYRLGHGNKETYLL-PTCVSSLIDYNFHQL 354

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL----EEVGSVVQ-IAA 276
             G N T  LT  GHV T G   +GQLG+      P+   + P       VG  V+ I+ 
Sbjct: 355 ACGHNMTVALTTSGHVFTMGGTAYGQLGN------PSSDGVIPCLVQDRLVGEFVEEISC 408

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
           G  + + +T    V+S+G GSN  LGHG+  D   P  I+  + +  HV  +S G     
Sbjct: 409 GAYHTVVLTSRNEVFSWGRGSNGRLGHGDVEDRKAPTLIEALKDR--HVKSISCGSNFTA 466

Query: 337 ALDSSGYVS 345
           ++    +VS
Sbjct: 467 SICIHKWVS 475



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 68/247 (27%), Positives = 112/247 (45%), Gaps = 23/247 (9%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVS 169
            QI  G  H  L++    VF+ G    G LGHG +      F+R   + F + +HV  V+
Sbjct: 131 QQIACGVRHIALVTRQGEVFTWGEECGGRLGHGIDR----DFSRPHLVEFLAVSHVDFVA 186

Query: 170 ASENHAAFVLQSGQVFTCGDN--SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
             E H   +  S  ++T GD   +S   GH          R+V +L+G+    V  G   
Sbjct: 187 CGEYHTCAITSSNDLYTWGDGIFNSGILGHGTDISHWIPKRVVGSLEGLQVLSVACGTWH 246

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV--- 284
           +   T  G ++T G  T+G LGHGD      P+ +  L  +   +++A G  +  A+   
Sbjct: 247 SALATSNGKLYTFGDGTYGVLGHGDRESVVYPREVQLLSGL-RTIKVACGVWHTAAIVEV 305

Query: 285 ---TGNGV----VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
              TG+ +    ++++G G  + LGHG +   L P  + +      H  +++ G    VA
Sbjct: 306 MSQTGSNMSSRKLFTWGDGDKYRLGHGNKETYLLPTCVSSLIDYNFH--QLACGHNMTVA 363

Query: 338 LDSSGYV 344
           L +SG+V
Sbjct: 364 LTTSGHV 370



 Score = 74.7 bits (182), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 55/176 (31%), Positives = 81/176 (46%), Gaps = 5/176 (2%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++    H A V + G+VFT G+      GH   +R   RP LVE L       V  G
Sbjct: 130 VQQIACGVRHIALVTRQGEVFTWGEECGGRLGH-GIDRDFSRPHLVEFLAVSHVDFVACG 188

Query: 225 LNFTGFLTIRGHVHTCGSN--THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
              T  +T    ++T G      G LGHG  +    PK +    E   V+ +A G  +  
Sbjct: 189 EYHTCAITSSNDLYTWGDGIFNSGILGHGTDISHWIPKRVVGSLEGLQVLSVACGTWHSA 248

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             T NG +Y+FG G+   LGHG++   + PR +Q     G+  ++V+ G  H  A+
Sbjct: 249 LATSNGKLYTFGDGTYGVLGHGDRESVVYPREVQLL--SGLRTIKVACGVWHTAAI 302



 Score = 60.8 bits (146), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 110/242 (45%), Gaps = 17/242 (7%)

Query: 116 ITTGRYHTLLISNSS-VFSCGSSL--CGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +  G YHT  I++S+ +++ G  +   G+LGHG + +  +    +       V+ V+   
Sbjct: 185 VACGEYHTCAITSSNDLYTWGDGIFNSGILGHGTDISHWIPKRVVGSLEGLQVLSVACGT 244

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG-------- 224
            H+A    +G+++T GD +    GH D    ++ PR V+ L G+   +V  G        
Sbjct: 245 WHSALATSNGKLYTFGDGTYGVLGHGDRESVVY-PREVQLLSGLRTIKVACGVWHTAAIV 303

Query: 225 --LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
             ++ TG       + T G     +LGHG+      P  ++ L +  +  Q+A G +  +
Sbjct: 304 EVMSQTGSNMSSRKLFTWGDGDKYRLGHGNKETYLLPTCVSSLIDY-NFHQLACGHNMTV 362

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           A+T +G V++ G  +   LG+    D + P  +Q  R  G  V  +S G  H V L S  
Sbjct: 363 ALTTSGHVFTMGGTAYGQLGN-PSSDGVIPCLVQD-RLVGEFVEEISCGAYHTVVLTSRN 420

Query: 343 YV 344
            V
Sbjct: 421 EV 422


>gi|327261081|ref|XP_003215360.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Anolis
           carolinensis]
          Length = 526

 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 98/219 (44%), Gaps = 4/219 (1%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQ 183
           +  N+ VF+ G++  G LG G +T   V   R++      +  +S  S  H       G+
Sbjct: 37  VTENNEVFALGTNCSGCLGVG-DTQNSVEPRRLDTLCGKKITCLSYGSGPHVVVATAEGE 95

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           V+T G N+    G+  TN  +   ++   L      +V  G + +  LT  G V+T G N
Sbjct: 96  VYTWGHNAYSQLGNGTTNNSLLPCQISTNLVNKKVTEVACGSHHSMILTSDGEVYTWGYN 155

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 303
             GQ+G G T ++  P+ +    +    V IA G    +AV  NG VY +G   N  LG 
Sbjct: 156 NSGQVGSGSTANQAIPRRVTSCLQNKIAVNIACGQMCSMAVVENGEVYVWGYNGNGQLGL 215

Query: 304 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           G   ++  P  I     +GI V RV+ G  H + L   G
Sbjct: 216 GNSGNQPTPCRIAAL--QGIRVQRVACGYAHTLVLTDEG 252



 Score = 54.7 bits (130), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 41/164 (25%), Positives = 85/164 (51%), Gaps = 6/164 (3%)

Query: 115 QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           ++  G +H++++ S+  V++ G +  G +G G    Q +     +       V ++  + 
Sbjct: 132 EVACGSHHSMILTSDGEVYTWGYNNSGQVGSGSTANQAIPRRVTSCLQNKIAVNIACGQM 191

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            +  V+++G+V+  G N +   G  ++ N+P   P  + AL+G+  ++V  G   T  LT
Sbjct: 192 CSMAVVENGEVYVWGYNGNGQLGLGNSGNQPT--PCRIAALQGIRVQRVACGYAHTLVLT 249

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
             G ++  G+N++GQLG G+  ++  P  I   ++   V++IAA
Sbjct: 250 DEGQMYAWGANSYGQLGTGNRSNQSYPVPITVDKD--RVIEIAA 291


>gi|242014091|ref|XP_002427731.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
 gi|212512172|gb|EEB14993.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
          Length = 4834

 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 69/252 (27%), Positives = 111/252 (44%), Gaps = 14/252 (5%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSF 154
             L+S++H           + + +G  H L +S +  V+S G    G LGHG     C   
Sbjct: 4046 LLESIQH------IFIKKVAVNSGGKHCLALSTDGKVYSWGEGDDGKLGHG-NKNGCDHP 4098

Query: 155  TRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK 214
              I+      +V ++    H+A V   G+++T G       GH D+   + +P+LVE L 
Sbjct: 4099 QLIDALQGKEIVDIACGGAHSAAVTAGGEIYTWGKGRYGRLGHGDSEDQM-KPKLVETLI 4157

Query: 215  GVPCKQVTAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
            G     +  G      L I    +V + G   +G+LG G +     P  I  L  +G VV
Sbjct: 4158 GFKVIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLG-VV 4216

Query: 273  QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
            ++  G  + +A+T +G VY++G G    LGHG       P+ I     +G  ++ ++ G 
Sbjct: 4217 KVECGSQFSVALTRSGSVYTWGKGDYHRLGHGSDEHVRHPKKIAAL--QGKKIICIATGS 4274

Query: 333  EHVVALDSSGYV 344
             H VA    G V
Sbjct: 4275 LHCVACSDLGEV 4286



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 71/235 (30%), Positives = 103/235 (43%), Gaps = 21/235 (8%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSAS 171
            G++   L  +  VFS G    G LGH        P+  + +   RI          ++  
Sbjct: 3081 GKHAMALTLDGKVFSWGEGEDGKLGHDNRLSLDRPKMIEALKSKRIR--------DIACG 3132

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TG 229
             +H+A +  +G++FT G       GH D N    RP+LV+AL G    QV  G     T 
Sbjct: 3133 SSHSAAISSTGELFTWGLGEYGRLGHGD-NLTQLRPKLVKALLGHHIVQVACGSRDAQTL 3191

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L+  G V + G    G+LG G +     P +I  L  +G V  I  G  + LA+T  G 
Sbjct: 3192 ALSAEGLVFSWGDGDFGKLGRGGSEGCDIPHNIERLNGLG-VCMIECGAQFSLALTKFGQ 3250

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            VY++G G  F LGHG      +P  +++   K I  V V+ G  H +     G V
Sbjct: 3251 VYTWGKGDYFRLGHGSDQHVRKPTLVESLSEKKI--VHVAVGALHCLCATDQGQV 3303



 Score = 77.8 bits (190), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 68/242 (28%), Positives = 111/242 (45%), Gaps = 12/242 (4%)

Query: 109  TSAGNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLG--HGPETTQCVSFTRINFPSAAHV 165
            T+   + I  G     ++S +  +++CG    G LG  H          T +N       
Sbjct: 3016 TALKPIHIAGGSKSLFIVSYDGKLYACGEGTNGRLGLGHSNNVATPCQLTSLN-QYVIKK 3074

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V +   HA  +   G+VF+ G+      GH D    + RP+++EALK    + +  G 
Sbjct: 3075 VAVHSGGKHAMALTLDGKVFSWGEGEDGKLGH-DNRLSLDRPKMIEALKSKRIRDIACGS 3133

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYML 282
            + +  ++  G + T G   +G+LGHGD L +  PK +  L  +G  +VQ+A G   +  L
Sbjct: 3134 SHSAAISSTGELFTWGLGEYGRLGHGDNLTQLRPKLVKAL--LGHHIVQVACGSRDAQTL 3191

Query: 283  AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            A++  G+V+S+G G    LG G       P  I+  R  G+ V  +  G +  +AL   G
Sbjct: 3192 ALSAEGLVFSWGDGDFGKLGRGGSEGCDIPHNIE--RLNGLGVCMIECGAQFSLALTKFG 3249

Query: 343  YV 344
             V
Sbjct: 3250 QV 3251



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 70/228 (30%), Positives = 110/228 (48%), Gaps = 7/228 (3%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G++   L  +  V+S G+   G LGHG   ++    T+I      +V+ +S    ++A V
Sbjct: 530 GKHSLALSCDGDVYSWGNGDGGRLGHGDNNSRDQP-TKITELVGKNVIHISCGATYSAAV 588

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR--GH 236
             SG+V+T G  +    GH  T+     P LV  LK      +  G      L +   G 
Sbjct: 589 TSSGEVYTWGRGNYGRLGH-GTSEDHTVPTLVVGLKDYFIVDIACGSGDAQTLAVTNTGL 647

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           V + G   +G+LG G +    TPK I  L+++  V ++  G  + LA+T +G VY++G G
Sbjct: 648 VFSWGDGGYGKLGTGGSDGSKTPKLIEKLQDI-EVARVYCGSQFSLALTKSGSVYTWGKG 706

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            N  LGHG ++    P+ ++    K I  V V +G  HV+AL   G V
Sbjct: 707 DNHRLGHGSENHVRFPKLVEGLNGKCIKKVAVGSG--HVLALTDDGEV 752



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/173 (29%), Positives = 86/173 (49%), Gaps = 6/173 (3%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
            SA   VQ+   E     V   G+V+  G  +    G   T+  I  P L+E+++ +  K+
Sbjct: 3999 SALRPVQLVGGEQTLLAVTSDGKVYATGYGAGGRLGLGGTDT-ILTPTLLESIQHIFIKK 4057

Query: 221  V--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
            V   +G      L+  G V++ G    G+LGHG+      P+ I  L+    +V IA G 
Sbjct: 4058 VAVNSGGKHCLALSTDGKVYSWGEGDDGKLGHGNKNGCDHPQLIDALQG-KEIVDIACGG 4116

Query: 279  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
            ++  AVT  G +Y++G G    LGHG+  D+++P+ ++T    G  V+ ++ G
Sbjct: 4117 AHSAAVTAGGEIYTWGKGRYGRLGHGDSEDQMKPKLVETL--IGFKVIDIACG 4167



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 68/233 (29%), Positives = 100/233 (42%), Gaps = 14/233 (6%)

Query: 115  QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA---HVVQVSA 170
             I  G  H+  IS++  +F+ G    G LGHG   TQ     R     A    H+VQV+ 
Sbjct: 3128 DIACGSSHSAAISSTGELFTWGLGEYGRLGHGDNLTQL----RPKLVKALLGHHIVQVAC 3183

Query: 171  SENHAAFVLQS--GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
                A  +  S  G VF+ GD      G R  +     P  +E L G+    +  G  F+
Sbjct: 3184 GSRDAQTLALSAEGLVFSWGDGDFGKLG-RGGSEGCDIPHNIERLNGLGVCMIECGAQFS 3242

Query: 229  GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
              LT  G V+T G   + +LGHG       P  +  L E   +V +A G  + L  T  G
Sbjct: 3243 LALTKFGQVYTWGKGDYFRLGHGSDQHVRKPTLVESLSE-KKIVHVAVGALHCLCATDQG 3301

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
             VY++G   +   G+G      +P  +     +G+ V RV+ G  H +A  +S
Sbjct: 3302 QVYAWGDNDHGQQGNGTILVNRKPSLVLNL--EGVRVNRVACGSSHSIAWTTS 3352



 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 58/211 (27%), Positives = 94/211 (44%), Gaps = 24/211 (11%)

Query: 137 SLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCG 196
           S C  LG  P++  C S   +       V Q+  +E     +  +G+V+    +S   C 
Sbjct: 459 SSCHDLGTSPQS--CDSIRELG------VKQIVCAERWLLILTLTGKVYIMYYSSETQC- 509

Query: 197 HRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGHVHTCGSNTHGQLGHGDTL 254
                     P  +E   G    ++ A  +   +  L+  G V++ G+   G+LGHGD  
Sbjct: 510 ----------PEQIEGFDGKEISKLAAHADGKHSLALSCDGDVYSWGNGDGGRLGHGDNN 559

Query: 255 DRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPR 313
            R  P  I  L  VG +V+ I+ G +Y  AVT +G VY++G G+   LGHG   D   P 
Sbjct: 560 SRDQPTKITEL--VGKNVIHISCGATYSAAVTSSGEVYTWGRGNYGRLGHGTSEDHTVPT 617

Query: 314 AIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            +   +   I  +   +GD   +A+ ++G V
Sbjct: 618 LVVGLKDYFIVDIACGSGDAQTLAVTNTGLV 648



 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 49/193 (25%), Positives = 90/193 (46%), Gaps = 5/193 (2%)

Query: 152  VSFTRINFPSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLV 210
            VSF   ++     V  +S + +H+     S  +VF  G N     G    ++ +  P   
Sbjct: 2954 VSFLATDYEEIPEVKTLSETSSHSKLWSDSPTKVFVWGLNDKDQLGGLKGSK-VKVPVYS 3012

Query: 211  EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE-VG 269
            E+L  +    +  G      ++  G ++ CG  T+G+LG G + +  TP  +  L + V 
Sbjct: 3013 ESLTALKPIHIAGGSKSLFIVSYDGKLYACGEGTNGRLGLGHSNNVATPCQLTSLNQYVI 3072

Query: 270  SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
              V + +G  + +A+T +G V+S+G G +  LGH  +    +P+ I+  + K I    ++
Sbjct: 3073 KKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHDNRLSLDRPKMIEALKSKRIR--DIA 3130

Query: 330  AGDEHVVALDSSG 342
             G  H  A+ S+G
Sbjct: 3131 CGSSHSAAISSTG 3143



 Score = 47.8 bits (112), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 2/120 (1%)

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
            V +V      +  + +SG V+T G   +   GH   N   F P+LVE L G   K+V  
Sbjct: 680 EVARVYCGSQFSLALTKSGSVYTWGKGDNHRLGHGSENHVRF-PKLVEGLNGKCIKKVAV 738

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G      LT  G V+  G N +GQ+G     +   P ++  L +  ++V I  GP+  +A
Sbjct: 739 GSGHVLALTDDGEVYGWGRNDNGQVGETSETNVSEP-TLLTLLQGKNIVDIDCGPNQSIA 797



 Score = 40.0 bits (92), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 54/110 (49%), Gaps = 1/110 (0%)

Query: 235  GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
            G ++  G N  GQLG  +      P S   L  +  V Q+  G   +LAVT +G VY+ G
Sbjct: 3968 GTIYGWGHNHRGQLGGVEGPKVKIPTSCEALSALRPV-QLVGGEQTLLAVTSDGKVYATG 4026

Query: 295  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             G+   LG G     L P  +++ +   I  V V++G +H +AL + G V
Sbjct: 4027 YGAGGRLGLGGTDTILTPTLLESIQHIFIKKVAVNSGGKHCLALSTDGKV 4076


>gi|219847606|ref|YP_002462039.1| chromosome condensation regulator RCC1 [Chloroflexus aggregans DSM
           9485]
 gi|219541865|gb|ACL23603.1| regulator of chromosome condensation RCC1 [Chloroflexus aggregans
           DSM 9485]
          Length = 784

 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 75/240 (31%), Positives = 110/240 (45%), Gaps = 20/240 (8%)

Query: 111 AGNMQITTGRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G   I  G YHT  L S+  V+  G +  G LG G  T +         PS   V  ++
Sbjct: 468 SGVTAIAAGNYHTCALTSSGGVWCWGRNDSGQLGDGTTTNRSTPGAVGGLPSG--VTAIA 525

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCG---HRDTNRPIFRPRLVEALKGVPCK--QVTAG 224
           A + H   ++ SG V+  G N+    G   + D++ P+       A+ G+P     + AG
Sbjct: 526 AGDYHTCALMSSGGVWCWGLNNRGQLGDGSYTDSSTPV-------AVGGLPSGVMAIAAG 578

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
              T  LT    V   G+N+ GQLG G T +R TP +++ L     V  IAAG  +  A+
Sbjct: 579 NYHTCALTGSDGVWCWGTNSDGQLGDGTTTNRSTPVAVSGLPS--GVTAIAAGNYHTCAL 636

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           T +G V+ +G   +  LG G   +   P A+         V  ++AGDEH  AL  SG V
Sbjct: 637 TSSGGVWCWGYNLSGQLGDGTTTNRSTPGAVSGLPSG---VTAIAAGDEHTCALTGSGGV 693



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 75/244 (30%), Positives = 103/244 (42%), Gaps = 28/244 (11%)

Query: 111 AGNMQITTGRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G   I  G  HT  L+S+  V+  G +L G LG G              PS   V  ++
Sbjct: 162 SGVTAIAAGGAHTCALMSSGGVWCWGYNLSGQLGDGSTIYHITPVAVSGLPS--EVTAIA 219

Query: 170 ASENHAAFVLQSGQVFTCGDNS-------SFCCGHRDTNRPIFRPRLVEALKGVP--CKQ 220
           A   H   +  SG V+  GDN        SF     D++ P        A+ G+P     
Sbjct: 220 AGYAHTCALTGSGGVWCWGDNGFGQLGDGSF----TDSSTP-------AAVGGLPSGVTA 268

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           + AG  +T  LT  G V   G N  GQLG G   +R TP ++  L     V  IAAG ++
Sbjct: 269 IAAGGRYTCALTSSGGVWCWGRNDSGQLGDGSFTNRSTPGAVGGLPS--GVTAIAAGGAH 326

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
             A+T +G V+ +G   +  LG G   D   P A+         V  ++AG  H  A  S
Sbjct: 327 TCALTSSGGVWCWGGNDSGQLGDGSYTDRSTPGAVSGLPSG---VTAIAAGGAHTCARTS 383

Query: 341 SGYV 344
           SG V
Sbjct: 384 SGGV 387



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 79/261 (30%), Positives = 108/261 (41%), Gaps = 16/261 (6%)

Query: 89  NWKRVLRFLQSVEHSSDIVETS--AGNMQITTGRYHT-LLISNSSVFSCGSSLCGVLGHG 145
           NW   L      + S+ +  +   +G   I  G  HT  L S+  V   G +  G LG G
Sbjct: 87  NWSGQLGDGSYTDRSTPVAVSGLPSGVTAIAAGGAHTCALTSSGGVMCWGGNYFGQLGDG 146

Query: 146 PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF 205
             T +         PS   V  ++A   H   ++ SG V+  G N S   G       I+
Sbjct: 147 SYTDRSTPVAVSGLPSG--VTAIAAGGAHTCALMSSGGVWCWGYNLS---GQLGDGSTIY 201

Query: 206 RPRLVEALKGVPCK--QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
               V A+ G+P +   + AG   T  LT  G V   G N  GQLG G   D  TP ++ 
Sbjct: 202 HITPV-AVSGLPSEVTAIAAGYAHTCALTGSGGVWCWGDNGFGQLGDGSFTDSSTPAAVG 260

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 323
            L     V  IAAG  Y  A+T +G V+ +G   +  LG G   +   P A+        
Sbjct: 261 GLPS--GVTAIAAGGRYTCALTSSGGVWCWGRNDSGQLGDGSFTNRSTPGAVGGLPSG-- 316

Query: 324 HVVRVSAGDEHVVALDSSGYV 344
            V  ++AG  H  AL SSG V
Sbjct: 317 -VTAIAAGGAHTCALTSSGGV 336



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 73/231 (31%), Positives = 100/231 (43%), Gaps = 19/231 (8%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           GRY   L S+  V+  G +  G LG G  T +         PS   V  ++A   H   +
Sbjct: 273 GRYTCALTSSGGVWCWGRNDSGQLGDGSFTNRSTPGAVGGLPSG--VTAIAAGGAHTCAL 330

Query: 179 LQSGQVFTCGDNSSFCCG---HRDTNRPIFRPRLVEALKGVP--CKQVTAGLNFTGFLTI 233
             SG V+  G N S   G   + D + P        A+ G+P     + AG   T   T 
Sbjct: 331 TSSGGVWCWGGNDSGQLGDGSYTDRSTP-------GAVSGLPSGVTAIAAGGAHTCARTS 383

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V   G N +GQLG G T DR TP +++ L     V  IAAG  +  A+TG+  V+ +
Sbjct: 384 SGGVWCWGGNFYGQLGDGTTTDRSTPGAVSGLPS--GVTAIAAGNYHTCALTGSDGVWCW 441

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G      LG G   +   P A+         V  ++AG+ H  AL SSG V
Sbjct: 442 GDNFYGQLGDGTTTNRSTPGAVSGLPSG---VTAIAAGNYHTCALTSSGGV 489



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 71/221 (32%), Positives = 99/221 (44%), Gaps = 11/221 (4%)

Query: 111 AGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G M I  G YHT  ++ S  V+  G++  G LG G  T +         PS   V  ++
Sbjct: 570 SGVMAIAAGNYHTCALTGSDGVWCWGTNSDGQLGDGTTTNRSTPVAVSGLPSG--VTAIA 627

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEAL-KGVPCKQVTAGLNF 227
           A   H   +  SG V+  G N S   G    TNR    P  V  L  GV    + AG   
Sbjct: 628 AGNYHTCALTSSGGVWCWGYNLSGQLGDGTTTNRST--PGAVSGLPSGV--TAIAAGDEH 683

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           T  LT  G V   G N +GQLG G T +R TP +++ L     V  IAAG  +  A+TG+
Sbjct: 684 TCALTGSGGVWCWGDNYYGQLGDGTTTNRSTPGAVSGLPS--GVTAIAAGVYHTCALTGS 741

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 328
           G V  +G+  +  LG G       P  + T    G+++  +
Sbjct: 742 GGVMCWGNNGDGQLGDGRPLYRTTPVDVVTSASWGVYLPMI 782



 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 73/234 (31%), Positives = 97/234 (41%), Gaps = 14/234 (5%)

Query: 111 AGNMQITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G   I  G  HT    S+  V+  G +  G LG G  T +         PS   V  ++
Sbjct: 366 SGVTAIAAGGAHTCARTSSGGVWCWGGNFYGQLGDGTTTDRSTPGAVSGLPSG--VTAIA 423

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEAL-KGVPCKQVTAGLNF 227
           A   H   +  S  V+  GDN     G    TNR    P  V  L  GV    + AG   
Sbjct: 424 AGNYHTCALTGSDGVWCWGDNFYGQLGDGTTTNRST--PGAVSGLPSGV--TAIAAGNYH 479

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           T  LT  G V   G N  GQLG G T +R TP ++  L     V  IAAG  +  A+  +
Sbjct: 480 TCALTSSGGVWCWGRNDSGQLGDGTTTNRSTPGAVGGLPS--GVTAIAAGDYHTCALMSS 537

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           G V+ +G  +   LG G   D   P A+         V+ ++AG+ H  AL  S
Sbjct: 538 GGVWCWGLNNRGQLGDGSYTDSSTPVAVGGLPSG---VMAIAAGNYHTCALTGS 588



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 83/185 (44%), Gaps = 17/185 (9%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCG---HRDTNRPIFRPRLVEALKGVP--CK 219
           V  ++A   H   +  SG+V+  G N S   G   + D + P+       A+ G+P    
Sbjct: 62  VTAIAAGSWHTCALTGSGEVWCWGYNWSGQLGDGSYTDRSTPV-------AVSGLPSGVT 114

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
            + AG   T  LT  G V   G N  GQLG G   DR TP +++ L     V  IAAG +
Sbjct: 115 AIAAGGAHTCALTSSGGVMCWGGNYFGQLGDGSYTDRSTPVAVSGLPS--GVTAIAAGGA 172

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
           +  A+  +G V+ +G   +  LG G     + P A+     +   V  ++AG  H  AL 
Sbjct: 173 HTCALMSSGGVWCWGYNLSGQLGDGSTIYHITPVAVSGLPSE---VTAIAAGYAHTCALT 229

Query: 340 SSGYV 344
            SG V
Sbjct: 230 GSGGV 234


>gi|444732065|gb|ELW72388.1| RCC1 and BTB domain-containing protein 2 [Tupaia chinensis]
          Length = 527

 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 94/218 (43%), Gaps = 4/218 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  +F  G++ CG LG G +    +   R++  S   +  +S  S  H       G+VFT
Sbjct: 40  NDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDCLSGKKIACLSYGSGPHVVLATTEGEVFT 98

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN  +    +   L      +V  G   +  LT  G V   G N  G
Sbjct: 99  WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 158

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T ++P P+ +    +   VV IA G    +AV   G VY +G   N  LG G  
Sbjct: 159 QVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSS 218

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            +  QP   +    +GI V RV+ G  H + L   G V
Sbjct: 219 GN--QPTPCRVSALQGIRVQRVACGYAHTLVLTDEGQV 254



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 91/185 (49%), Gaps = 8/185 (4%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G YH+L L S+  VF+ G +  G +G G    Q +            VV ++  +
Sbjct: 131 IEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQ 190

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             +  V+ +G+V+  G N +   G   + N+P   P  V AL+G+  ++V  G   T  L
Sbjct: 191 MCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPT--PCRVSALQGIRVQRVACGYAHTLVL 248

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS--YMLAVTGNGV 289
           T  G V+  G+N++GQLG G+  ++  P  +  + E   +++IAA  S     A T  G 
Sbjct: 249 TDEGQVYAWGANSYGQLGTGNKSNQSYPTPV--VVEKDRIIEIAACHSAHTSAAKTQGGH 306

Query: 290 VYSFG 294
           VY +G
Sbjct: 307 VYMWG 311



 Score = 38.9 bits (89), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 53/116 (45%), Gaps = 3/116 (2%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE-EVGSVVQIAAGPSYMLAVTGNG 288
           + T+   +   G+N  G LG GD      P+ +  L  +  + +   +GP  +LA T  G
Sbjct: 36  YTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDCLSGKKIACLSYGSGPHVVLATT-EG 94

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            V+++G  +   LG+G  +  L P  I T       V+ V+ G  H + L S G V
Sbjct: 95  EVFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVIEVACGSYHSLVLTSDGEV 149


>gi|428185814|gb|EKX54666.1| hypothetical protein GUITHDRAFT_40316, partial [Guillardia theta
           CCMP2712]
          Length = 272

 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 57/198 (28%), Positives = 91/198 (45%), Gaps = 6/198 (3%)

Query: 107 VETSAGNMQITTG-RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV 165
            +T    +Q+  G  +   L     +F  G    GVL  G E ++       +     +V
Sbjct: 79  AKTDGKCVQVAAGYNFSMALTDRGEIFVFGEGRHGVLAQGDELSKSSPQVIDSLSVPGYV 138

Query: 166 V-QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V ++   E H A +++ GQ  T G  S    GH   +   F PR VE L  V  + ++ G
Sbjct: 139 VDKIFCGERHCACIVRYGQALTWGCGSDGQLGHSSRDDEHF-PRKVEHLANVSVRTISCG 197

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
              T FLT    ++TCG+   G+LGHGD      PK +  L+   +V +++ G  +   +
Sbjct: 198 SKHTCFLTSDNSLYTCGNGKDGKLGHGDERSYLYPKKVETLQ---AVKEVSCGDYHTACI 254

Query: 285 TGNGVVYSFGSGSNFCLG 302
            G  ++Y+FGSG+   LG
Sbjct: 255 DGKSIIYTFGSGTRGQLG 272



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 59/227 (25%), Positives = 102/227 (44%), Gaps = 10/227 (4%)

Query: 115 QITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            +  G  H++++S+  VF+ G +  G LGHGP  +  +        +    VQV+A  N 
Sbjct: 37  DMACGSAHSVILSDGKVFTWGQNKHGQLGHGP--SDYLGSLGPTAKTDGKCVQVAAGYNF 94

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK--GVPCKQVTAGLNFTGFLT 232
           +  +   G++F  G+         D       P+++++L   G    ++  G      + 
Sbjct: 95  SMALTDRGEIFVFGEGRHGVLAQGD-ELSKSSPQVIDSLSVPGYVVDKIFCGERHCACIV 153

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G   T G  + GQLGH    D   P+ +  L  V SV  I+ G  +   +T +  +Y+
Sbjct: 154 RYGQALTWGCGSDGQLGHSSRDDEHFPRKVEHLANV-SVRTISCGSKHTCFLTSDNSLYT 212

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
            G+G +  LGHG++   L P+ ++T +     V  VS GD H   +D
Sbjct: 213 CGNGKDGKLGHGDERSYLYPKKVETLQA----VKEVSCGDYHTACID 255


>gi|291401444|ref|XP_002717009.1| PREDICTED: hect domain and RLD 3-like [Oryctolagus cuniculus]
          Length = 974

 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 85/151 (56%), Gaps = 1/151 (0%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           ++Q++  + H+  + + G++F  G NS    G       +  P++VE L GVP  Q++AG
Sbjct: 130 IIQITCGDYHSLALSKGGELFAWGQNSHGQLGIGVMCPSVPTPQIVEHLAGVPLVQISAG 189

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
              +  L++ G+V++ G N  GQLG G T ++ +P  I  L+    V  +A G S+   +
Sbjct: 190 EAHSMTLSMSGNVYSWGKNDLGQLGLGHTENKDSPCLIEALDN-QKVEFVACGGSHTALL 248

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAI 315
           T +G +++FG+G    LGH  + +EL+PR +
Sbjct: 249 TQDGQLFTFGAGKYGQLGHKSKRNELKPRLV 279



 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 77/167 (46%), Gaps = 7/167 (4%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QIT G YH+L +S    +F+ G +  G LG G       +   +   +   +VQ+SA E
Sbjct: 131 IQITCGDYHSLALSKGGELFAWGQNSHGQLGIGVMCPSVPTPQIVEHLAGVPLVQISAGE 190

Query: 173 NHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            H+  +  SG V++ G N       GH +       P L+EAL     + V  G + T  
Sbjct: 191 AHSMTLSMSGNVYSWGKNDLGQLGLGHTENKD---SPCLIEALDNQKVEFVACGGSHTAL 247

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG 277
           LT  G + T G+  +GQLGH    +   P+ +  L     V QIA G
Sbjct: 248 LTQDGQLFTFGAGKYGQLGHKSKRNELKPRLVTVL-VANRVTQIACG 293



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 60/126 (47%), Gaps = 8/126 (6%)

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAGP 278
           Q+T G   +  L+  G +   G N+HGQLG G      PTP+ +  L  V  +VQI+AG 
Sbjct: 132 QITCGDYHSLALSKGGELFAWGQNSHGQLGIGVMCPSVPTPQIVEHLAGV-PLVQISAGE 190

Query: 279 SYMLAVTGNGVVYSFGSGS--NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
           ++ + ++ +G VYS+G        LGH E  D   P  I+    + +    V+ G  H  
Sbjct: 191 AHSMTLSMSGNVYSWGKNDLGQLGLGHTENKD--SPCLIEALDNQKVEF--VACGGSHTA 246

Query: 337 ALDSSG 342
            L   G
Sbjct: 247 LLTQDG 252


>gi|332218227|ref|XP_003258260.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Nomascus leucogenys]
          Length = 1057

 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIVQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   +        +QV+A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342



 Score = 79.0 bits (193), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 107/226 (47%), Gaps = 7/226 (3%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLVGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGV 263



 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 95/213 (44%), Gaps = 9/213 (4%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           P+ +++    GI  ++V+AG  H   L  SG +
Sbjct: 181 PQLLKSLV--GIPFMQVAAGGAHSFVLTLSGAI 211


>gi|332218225|ref|XP_003258259.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Nomascus leucogenys]
          Length = 1049

 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIVQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   +        +QV+A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342



 Score = 79.0 bits (193), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 107/226 (47%), Gaps = 7/226 (3%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLVGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGV 263



 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 95/213 (44%), Gaps = 9/213 (4%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           P+ +++    GI  ++V+AG  H   L  SG +
Sbjct: 181 PQLLKSLV--GIPFMQVAAGGAHSFVLTLSGAI 211


>gi|195376505|ref|XP_002047037.1| GJ12148 [Drosophila virilis]
 gi|194154195|gb|EDW69379.1| GJ12148 [Drosophila virilis]
          Length = 1053

 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 104/227 (45%), Gaps = 6/227 (2%)

Query: 115 QITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI  G  H++ ++    V S G + CG LGH  +         + +  +  VVQ++   N
Sbjct: 90  QIACGSRHSMALTEWGQVLSWGDNECGQLGHASDQDVIQLPKIVRYLVSKTVVQIACGNN 149

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNR--PIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           H+  +   G++++ G N     G +  +       P  +  L G+P   +  G N T  +
Sbjct: 150 HSLALTCCGELYSWGSNIYGQLGVKSPSELSQCNYPMRLTTLLGIPAAAIACGGNHTFLI 209

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           +    V   G N  GQLG  D  +R  P  +  L  +G V  +A G  + + +T  G V+
Sbjct: 210 SKSSAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLG-VRFVACGDEFSVFLTNEGGVF 268

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           + G+G+   LGHG   +E+ PR +      G  + +V+ G+ H +AL
Sbjct: 269 TCGAGAYGQLGHGFSSNEMLPRMVMELM--GSTISQVACGNRHTLAL 313



 Score = 77.4 bits (189), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 68/243 (27%), Positives = 110/243 (45%), Gaps = 22/243 (9%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+  G  HTL ++ S  V++CGS+    LGH   T + +    +       + Q++    
Sbjct: 40  QVACGHRHTLFLTASGKVYACGSNDYSQLGHELPTKRPLQIPEL---EDYVITQIACGSR 96

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  + + GQV + GDN     GH      I  P++V  L      Q+  G N +  LT 
Sbjct: 97  HSMALTEWGQVLSWGDNECGQLGHASDQDVIQLPKIVRYLVSKTVVQIACGNNHSLALTC 156

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPT-------PKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
            G +++ GSN +GQLG    +  P+       P  +  L  + +   IA G ++   ++ 
Sbjct: 157 CGELYSWGSNIYGQLG----VKSPSELSQCNYPMRLTTLLGIPAAA-IACGGNHTFLISK 211

Query: 287 NGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           +  V  FG G N C  LG  ++ +   P  ++T R  G+    V+ GDE  V L + G V
Sbjct: 212 SSAV--FGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRF--VACGDEFSVFLTNEGGV 267

Query: 345 SLC 347
             C
Sbjct: 268 FTC 270



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 69/199 (34%), Positives = 102/199 (51%), Gaps = 18/199 (9%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLG-HGP-ETTQCVSFTRIN----FPSAAHVV 166
           +QI  G  H+L L     ++S GS++ G LG   P E +QC    R+      P+AA   
Sbjct: 142 VQIACGNNHSLALTCCGELYSWGSNIYGQLGVKSPSELSQCNYPMRLTTLLGIPAAA--- 198

Query: 167 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGL 225
            ++   NH   + +S  VF  G N+    G  D TNR    P  ++ L+ +  + V  G 
Sbjct: 199 -IACGGNHTFLISKSSAVFGWGRNNCGQLGLNDETNRAY--PTQLKTLRTLGVRFVACGD 255

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA- 283
            F+ FLT  G V TCG+  +GQLGHG + +   P+ +  +E +GS + Q+A G  + LA 
Sbjct: 256 EFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMV--MELMGSTISQVACGNRHTLAL 313

Query: 284 VTGNGVVYSFGSGSNFCLG 302
           V   G +Y FG GS+  LG
Sbjct: 314 VPSRGRIYGFGLGSSGQLG 332



 Score = 72.0 bits (175), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 54/167 (32%), Positives = 79/167 (47%), Gaps = 4/167 (2%)

Query: 130 SVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
            ++  G++  G LG G  E  Q ++ ++I +   + V QV+    H  F+  SG+V+ CG
Sbjct: 2   ELYCWGNASHGQLGLGGIEDEQILTPSQIPWKPDSAVNQVACGHRHTLFLTASGKVYACG 61

Query: 189 DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 248
            N     GH     P  RP  +  L+     Q+  G   +  LT  G V + G N  GQL
Sbjct: 62  SNDYSQLGHE---LPTKRPLQIPELEDYVITQIACGSRHSMALTEWGQVLSWGDNECGQL 118

Query: 249 GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
           GH    D      I       +VVQIA G ++ LA+T  G +YS+GS
Sbjct: 119 GHASDQDVIQLPKIVRYLVSKTVVQIACGNNHSLALTCCGELYSWGS 165



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 68/149 (45%), Gaps = 4/149 (2%)

Query: 116 ITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G  HT LIS SS VF  G + CG LG   ET +    T++       V  V+  +  
Sbjct: 199 IACGGNHTFLISKSSAVFGWGRNNCGQLGLNDETNRAYP-TQLKTLRTLGVRFVACGDEF 257

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFLTI 233
           + F+   G VFTCG  +    GH  ++  +  PR+V  L G    QV  G   T   +  
Sbjct: 258 SVFLTNEGGVFTCGAGAYGQLGHGFSSNEML-PRMVMELMGSTISQVACGNRHTLALVPS 316

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           RG ++  G  + GQLG  +T     P+ +
Sbjct: 317 RGRIYGFGLGSSGQLGTRNTKSLNLPQVV 345


>gi|440800739|gb|ELR21774.1| regulator of chromosome condensation (RCC1) repeat domain
           containing protein [Acanthamoeba castellanii str. Neff]
          Length = 292

 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/218 (30%), Positives = 104/218 (47%), Gaps = 13/218 (5%)

Query: 129 SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
           S + + G+   G LG G E   C    RIN      VV VS  + H+A   ++  V T G
Sbjct: 35  SVIIAVGNGESGRLGLGNENC-CNIPKRINIKKK--VVGVSCGDEHSAVFTEANTVLTWG 91

Query: 189 DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 248
           + +    G   T   I R + V  L      Q++ G ++T  LT+ G V T G  ++G+L
Sbjct: 92  NGTG---GRLGTGDEISRTQPV--LPEHKVAQISCGSDWTAVLTLAGKVFTFGVGSYGKL 146

Query: 249 GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD 308
           GHG+  ++  PK +  L+    VV ++ G  +M A+   G V+++G G N  LGHG + D
Sbjct: 147 GHGNDSNQLVPKLVEELDTE-RVVSLSCGADHMAALNIEGDVFTWGCGGNGRLGHGSERD 205

Query: 309 ELQPRAIQTFRRKGIHVVRVSAGDEH--VVALDSSGYV 344
             +P  ++     G+  + V  G  H  V  LD   Y+
Sbjct: 206 SKKPVLVKGM--NGLVALTVECGGYHMGVTTLDGELYM 241


>gi|10047261|dbj|BAB13419.1| KIAA1593 protein [Homo sapiens]
          Length = 953

 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/185 (31%), Positives = 88/185 (47%), Gaps = 4/185 (2%)

Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
           S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L G+P  Q
Sbjct: 31  SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQ 90

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           V AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V I  G  +
Sbjct: 91  VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCGEDH 149

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LD 339
             A+T  G V++FG+G    LGH     E+ PR +  F   G  V  ++ G +H  A + 
Sbjct: 150 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQHTSAFVP 207

Query: 340 SSGYV 344
           SSG +
Sbjct: 208 SSGRI 212



 Score = 77.8 bits (190), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   +        +QV+A  
Sbjct: 36  VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGG 95

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 96  AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 154

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V +IA G  +  A V  +G +
Sbjct: 155 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQHTSAFVPSSGRI 212

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 213 YSFGLGGNGQLGTGSTSNRKSPFTVK 238



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 68/138 (49%), Gaps = 4/138 (2%)

Query: 206 RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAP 264
           R R +++L  +   QV  G   +  L+    V   G N +GQLG G D   + +P+ +  
Sbjct: 23  RIRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKS 82

Query: 265 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
           L  +   +Q+AAG ++   +T +G ++ +G      LG  +++D   P  +++ R + I 
Sbjct: 83  LLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKI- 140

Query: 325 VVRVSAGDEHVVALDSSG 342
            V +  G++H  AL   G
Sbjct: 141 -VYICCGEDHTAALTKEG 157


>gi|195586891|ref|XP_002083201.1| GD13608 [Drosophila simulans]
 gi|194195210|gb|EDX08786.1| GD13608 [Drosophila simulans]
          Length = 1058

 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/208 (32%), Positives = 106/208 (50%), Gaps = 10/208 (4%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLG-HGP-ETTQCVSFTRINFPSAAHVVQVSA 170
           +QI  G  H+L L S   ++S GS++ G LG + P + T C    R+       +  ++ 
Sbjct: 146 VQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIAC 205

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
             NH+  + +SG VF  G N+    G  D TNR    P  ++ L+ +  +    G  F+ 
Sbjct: 206 GGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRAY--PTQLKTLRTLGVRFAACGDEFSV 263

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGN 287
           FLT  G V TCG+  +GQLGHG + +   P+ +  +E +GS + Q+A G  + LA V   
Sbjct: 264 FLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMV--MELMGSTITQVACGNRHTLAFVPSR 321

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAI 315
           G VY+FG GS+  LG       + P+ +
Sbjct: 322 GKVYAFGLGSSGQLGTRSTKSLMLPQVV 349



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 71/230 (30%), Positives = 105/230 (45%), Gaps = 21/230 (9%)

Query: 125 LISNSSVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 183
           + S   ++  GS+  G LG G  E  Q ++  +I +     V QVS    H  F+  +G+
Sbjct: 1   MASGKELYCWGSTSHGQLGLGGIEDEQILTPRQIPWTPDTAVQQVSCGHRHTLFLTATGK 60

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           V+ CG N     GH   + P  RP+L+  L+     Q++ G   +  L+  G V + G N
Sbjct: 61  VYACGSNDYSQLGH---DLPTKRPQLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDN 117

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEV------GSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
             GQLGH       T K I  L +V       +VVQIA G ++ LA+T  G +YS+GS  
Sbjct: 118 DCGQLGHA------TEKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNI 171

Query: 298 NFCLGHGEQHDELQ---PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              LG    +D      P  + T    GI +  ++ G  H   +  SG V
Sbjct: 172 YGQLGVNSPNDLTHCNYPLRLTTLL--GIPLAAIACGGNHSFLISKSGAV 219



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/239 (28%), Positives = 108/239 (45%), Gaps = 14/239 (5%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q++ G  HTL ++ +  V++CGS+    LGH   T +      +       ++Q+S    
Sbjct: 44  QVSCGHRHTLFLTATGKVYACGSNDYSQLGHDLPTKRPQLIPELQ---DYVIIQISCGSR 100

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  +   GQV + GDN     GH      +  P++V  L      Q+  G N +  LT 
Sbjct: 101 HSLALSDWGQVLSWGDNDCGQLGHATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTS 160

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRP---TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            G +++ GSN +GQLG     D      P  +  L  +  +  IA G ++   ++ +G V
Sbjct: 161 CGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGI-PLAAIACGGNHSFLISKSGAV 219

Query: 291 YSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSLC 347
             FG G N C  LG  ++ +   P  ++T R  G+     + GDE  V L + G V  C
Sbjct: 220 --FGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRF--AACGDEFSVFLTNEGGVFTC 274


>gi|119574650|gb|EAW54265.1| hect domain and RLD 4, isoform CRA_e [Homo sapiens]
          Length = 947

 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/185 (31%), Positives = 88/185 (47%), Gaps = 4/185 (2%)

Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
           S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L G+P  Q
Sbjct: 25  SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQ 84

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           V AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V I  G  +
Sbjct: 85  VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCGEDH 143

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LD 339
             A+T  G V++FG+G    LGH     E+ PR +  F   G  V  ++ G +H  A + 
Sbjct: 144 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQHTSAFVP 201

Query: 340 SSGYV 344
           SSG +
Sbjct: 202 SSGRI 206



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   +        +QV+A  
Sbjct: 30  VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGG 89

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 90  AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 148

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V +IA G  +  A V  +G +
Sbjct: 149 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQHTSAFVPSSGRI 206

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 207 YSFGLGGNGQLGTGSTSNRKSPFTVK 232



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 68/138 (49%), Gaps = 4/138 (2%)

Query: 206 RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAP 264
           R R +++L  +   QV  G   +  L+    V   G N +GQLG G D   + +P+ +  
Sbjct: 17  RIRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKS 76

Query: 265 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
           L  +   +Q+AAG ++   +T +G ++ +G      LG  +++D   P  +++ R + I 
Sbjct: 77  LLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKI- 134

Query: 325 VVRVSAGDEHVVALDSSG 342
            V +  G++H  AL   G
Sbjct: 135 -VYICCGEDHTAALTKEG 151


>gi|41053397|ref|NP_956285.1| RCC1 and BTB domain-containing protein 1 [Danio rerio]
 gi|28278439|gb|AAH45877.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Danio rerio]
 gi|182890896|gb|AAI65711.1| Rcbtb1 protein [Danio rerio]
          Length = 531

 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 108/217 (49%), Gaps = 6/217 (2%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           +  V+  G +    LG G ++   ++  +++  S   ++ +S  S  H   V + G+++ 
Sbjct: 40  DDEVYVLGLNCSNCLGTG-DSQSTIAPKKLDCLSGKKLISLSYGSGPHVLLVTEDGELYA 98

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH 245
            G N     G+  TN+ +  P LV   L+G    +V+ G + +  LT  G V   G N  
Sbjct: 99  WGHNGYSQLGNGTTNQGV-SPILVSTNLQGKRVTEVSCGSHHSLALTHEGEVFAWGYNNC 157

Query: 246 GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
           GQ+G G T ++PTP+ ++   +   +V IA G +  +AVT NG VY +G   N  LG G 
Sbjct: 158 GQVGSGSTANQPTPRKVSNCLQNKVIVNIACGQTSSMAVTDNGEVYGWGYNGNGQLGLGN 217

Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
             ++L P   +    +G  V+++++G  H +AL   G
Sbjct: 218 NGNQLTP--CRLIALQGFCVLQIASGYAHSLALTDEG 252



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 106/207 (51%), Gaps = 6/207 (2%)

Query: 122 HTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSASENHAAFVL 179
           H LL++ +  +++ G +    LG+G  T Q VS   ++       V +VS   +H+  + 
Sbjct: 86  HVLLVTEDGELYAWGHNGYSQLGNGT-TNQGVSPILVSTNLQGKRVTEVSCGSHHSLALT 144

Query: 180 QSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
             G+VF  G N+    G   T N+P  R ++   L+      +  G   +  +T  G V+
Sbjct: 145 HEGEVFAWGYNNCGQVGSGSTANQPTPR-KVSNCLQNKVIVNIACGQTSSMAVTDNGEVY 203

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
             G N +GQLG G+  ++ TP  +  L+    V+QIA+G ++ LA+T  G++Y++G+ + 
Sbjct: 204 GWGYNGNGQLGLGNNGNQLTPCRLIALQGF-CVLQIASGYAHSLALTDEGLLYAWGANTY 262

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHV 325
             LG G + ++L P  + T + + + +
Sbjct: 263 GQLGTGNKSNQLSPVQVMTEKERIVEI 289



 Score = 42.0 bits (97), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 56/123 (45%), Gaps = 3/123 (2%)

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYM 281
           A  N   ++T    V+  G N    LG GD+     PK +  L     + +   +GP ++
Sbjct: 29  ASANEAIYITHDDEVYVLGLNCSNCLGTGDSQSTIAPKKLDCLSGKKLISLSYGSGP-HV 87

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           L VT +G +Y++G      LG+G  +  + P  + T   +G  V  VS G  H +AL   
Sbjct: 88  LLVTEDGELYAWGHNGYSQLGNGTTNQGVSPILVST-NLQGKRVTEVSCGSHHSLALTHE 146

Query: 342 GYV 344
           G V
Sbjct: 147 GEV 149


>gi|301618184|ref|XP_002938503.1| PREDICTED: inhibitor of Bruton tyrosine kinase-like [Xenopus
           (Silurana) tropicalis]
          Length = 1332

 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 72/232 (31%), Positives = 110/232 (47%), Gaps = 20/232 (8%)

Query: 129 SSVFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSASENHAAFVLQSGQVFTC 187
           + V++ G ++   LGHG + ++        FP S  ++ QV   + H+ F+ Q GQV+TC
Sbjct: 143 TEVYTWGDNVNFTLGHGTQQSKHHPELLETFPRSGVYIKQVVLCKFHSVFLSQKGQVYTC 202

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G       GH D       PRLVE L   PC QV A  + T  L+  G+V+T G NT  Q
Sbjct: 203 GHGQGGRLGHGD-ELTCLVPRLVEGLSTHPCAQVAAAKDHTVVLSEDGYVYTFGLNTFHQ 261

Query: 248 LGHGDTLDRPTPKSIAPLE------EVGSVVQIAAGPSYMLAVTGNGVVYSFG-SGSNFC 300
           LG    +  P P S  P +      +  +V+ +AAG  + +  T +  VY+ G +G    
Sbjct: 262 LG----IQPPPPNSNVPKQVQAKTMKGKTVLGVAAGRFHTVLWTKDA-VYTVGLNGGQ-- 314

Query: 301 LGHGEQHDELQ----PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSLCS 348
           LG+ +  +  +    PR +     K I++  VSA D   V +   G + L S
Sbjct: 315 LGYLQDPNGEKCVSCPRQVSALHHKDINITLVSASDGATVCVSERGDIYLLS 366



 Score = 50.8 bits (120), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 43/100 (43%), Gaps = 4/100 (4%)

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 307
           L HG  L         PL+    VV     P  +   +    VY++G   NF LGHG Q 
Sbjct: 107 LKHGSNLYIQDKDGYTPLD----VVMKDRPPHIIFKTSDPTEVYTWGDNVNFTLGHGTQQ 162

Query: 308 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSLC 347
            +  P  ++TF R G+++ +V     H V L   G V  C
Sbjct: 163 SKHHPELLETFPRSGVYIKQVVLCKFHSVFLSQKGQVYTC 202



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 47/160 (29%), Positives = 77/160 (48%), Gaps = 10/160 (6%)

Query: 98  QSVEHSSDIVETSAGN----MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCV 152
           Q  +H  +++ET   +     Q+   ++H++ +S    V++CG    G LGHG E T C+
Sbjct: 161 QQSKHHPELLETFPRSGVYIKQVVLCKFHSVFLSQKGQVYTCGHGQGGRLGHGDELT-CL 219

Query: 153 SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA 212
               +   S     QV+A+++H   + + G V+T G N+    G +        P+ V+A
Sbjct: 220 VPRLVEGLSTHPCAQVAAAKDHTVVLSEDGYVYTFGLNTFHQLGIQPPPPNSNVPKQVQA 279

Query: 213 --LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH 250
             +KG     V AG  F   L  +  V+T G N  GQLG+
Sbjct: 280 KTMKGKTVLGVAAG-RFHTVLWTKDAVYTVGLNG-GQLGY 317


>gi|356536635|ref|XP_003536842.1| PREDICTED: uncharacterized protein LOC100812689 [Glycine max]
          Length = 1078

 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/233 (27%), Positives = 108/233 (46%), Gaps = 28/233 (12%)

Query: 116 ITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           +  G +H+ L  SN  +F+ G    GVLGHG   +  V++ + +   S    ++V+    
Sbjct: 373 VACGTWHSALATSNGKLFTFGDGRFGVLGHGNRAS--VAYPKEVQLLSGYKAIKVACGVW 430

Query: 174 HAAFVLQ----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
           H+A ++           + ++FT GD   +  GH +       P  V A+      QV  
Sbjct: 431 HSAAIIDVMDLSGSKASAKRLFTWGDGDQYRLGHAN-KETYLEPTCVAAVAEYNFHQVAC 489

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL----EEVGSVVQ-IAAGP 278
           G   T  LT  GHV + G  T+GQLG+      P      P+    + VG  V+ I+ G 
Sbjct: 490 GYTMTVALTASGHVFSMGGTTYGQLGN------PNSDGKVPILVRDKLVGEFVEEISCGA 543

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
           +++  +T    +Y++G G+N  LGHG+  D+  P  ++  + +  HV  +S G
Sbjct: 544 NHVAVLTSRSELYTWGRGANGRLGHGDTDDKKSPTLVEALKDR--HVKNISCG 594



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/177 (32%), Positives = 85/177 (48%), Gaps = 7/177 (3%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q+   + H A V + G+VFT G++S    GH    +   RP LVE+L       V  G
Sbjct: 263 VHQIGPGDRHIALVTRQGEVFTWGEDSGGRLGH-GFEKDFGRPHLVESLAITNVTFVACG 321

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQ--LGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
              +  ++  G + T G  THG   LGHG  +    PK ++ PLE +  VV +A G  + 
Sbjct: 322 EYHSCAVSTSGDLFTWGDGTHGAGLLGHGTDVSYWIPKRVSGPLEGL-QVVAVACGTWHS 380

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
              T NG +++FG G    LGHG +     P+ +Q     G   ++V+ G  H  A+
Sbjct: 381 ALATSNGKLFTFGDGRFGVLGHGNRASVAYPKEVQLL--SGYKAIKVACGVWHSAAI 435



 Score = 47.8 bits (112), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 69/141 (48%), Gaps = 4/141 (2%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  P+ +E+   +   Q+  G      +T +G V T G ++ G+LGHG   D   P  + 
Sbjct: 249 VLTPKPLESDVVLDVHQIGPGDRHIALVTRQGEVFTWGEDSGGRLGHGFEKDFGRPHLVE 308

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRK 321
            L  + +V  +A G  +  AV+ +G ++++G G++    LGHG       P+ + +   +
Sbjct: 309 SL-AITNVTFVACGEYHSCAVSTSGDLFTWGDGTHGAGLLGHGTDVSYWIPKRV-SGPLE 366

Query: 322 GIHVVRVSAGDEHVVALDSSG 342
           G+ VV V+ G  H     S+G
Sbjct: 367 GLQVVAVACGTWHSALATSNG 387



 Score = 41.6 bits (96), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 54/115 (46%), Gaps = 3/115 (2%)

Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+  G   T+ ++ S  VFS G +  G LG+ P +   V     +      V ++S   N
Sbjct: 486 QVACGYTMTVALTASGHVFSMGGTTYGQLGN-PNSDGKVPILVRDKLVGEFVEEISCGAN 544

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
           H A +    +++T G  ++   GH DT+     P LVEALK    K ++ G  FT
Sbjct: 545 HVAVLTSRSELYTWGRGANGRLGHGDTDDKK-SPTLVEALKDRHVKNISCGSTFT 598


>gi|397520495|ref|XP_003830352.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Pan paniscus]
          Length = 979

 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   +        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 79.0 bits (193), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 107/226 (47%), Gaps = 7/226 (3%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGV 263



 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 95/213 (44%), Gaps = 9/213 (4%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           P+ +++    GI  ++V+AG  H   L  SG +
Sbjct: 181 PQLLKSLL--GIPFMQVAAGGAHSFVLTLSGAI 211


>gi|114630760|ref|XP_001167652.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 4
           [Pan troglodytes]
          Length = 979

 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   +        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 79.0 bits (193), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 107/226 (47%), Gaps = 7/226 (3%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGV 263



 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 95/213 (44%), Gaps = 9/213 (4%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           P+ +++    GI  ++V+AG  H   L  SG +
Sbjct: 181 PQLLKSLL--GIPFMQVAAGGAHSFVLTLSGAI 211


>gi|255083701|ref|XP_002508425.1| predicted protein [Micromonas sp. RCC299]
 gi|226523702|gb|ACO69683.1| predicted protein [Micromonas sp. RCC299]
          Length = 261

 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 70/229 (30%), Positives = 108/229 (47%), Gaps = 10/229 (4%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAFVLQSGQ 183
           L  + ++ + G +  G LGHG  T   V   R +N  S   V Q++   NH   V + G 
Sbjct: 11  LDPDGALMTWGLASSGELGHGGWTPIEVDIPRRVNSMSGVKVTQIATGANHTVVVSEGGG 70

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           ++TCG       GH   N      RL EAL+G+   +  AG + T  LT  G V + G+ 
Sbjct: 71  LWTCGRGRHGQLGHGHFNDAGPLQRL-EALRGMNVTRAVAGGSHTVCLTDCGSVWSWGAC 129

Query: 244 THGQLGHGDTLDRPTPKSIAPLE------EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            +GQLG GD  +  TPK+   ++      +   +V+ AAG ++   +T  G V + GS S
Sbjct: 130 RYGQLGLGDDWEGRTPKNGVWIKVPCACGDRCKIVRAAAGGNHSAVLTACGAVMTTGSNS 189

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSL 346
              LGHG+         +++ R  G  +  V  G++H  A+  SG + L
Sbjct: 190 YGQLGHGDIKKRYAFTRVESLR--GSRLATVDCGEDHTGAVGDSGRLYL 236



 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 83/183 (45%), Gaps = 7/183 (3%)

Query: 168 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLN 226
           VS   +H A +   G + T G  SS   GH   T   +  PR V ++ GV   Q+  G N
Sbjct: 1   VSCGASHCAALDPDGALMTWGLASSGELGHGGWTPIEVDIPRRVNSMSGVKVTQIATGAN 60

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
            T  ++  G + TCG   HGQLGHG   D    + +  L  + +V +  AG S+ + +T 
Sbjct: 61  HTVVVSEGGGLWTCGRGRHGQLGHGHFNDAGPLQRLEALRGM-NVTRAVAGGSHTVCLTD 119

Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR-----RKGIHVVRVSAGDEHVVALDSS 341
            G V+S+G+     LG G+  +   P+     +          +VR +AG  H   L + 
Sbjct: 120 CGSVWSWGACRYGQLGLGDDWEGRTPKNGVWIKVPCACGDRCKIVRAAAGGNHSAVLTAC 179

Query: 342 GYV 344
           G V
Sbjct: 180 GAV 182



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 88/211 (41%), Gaps = 13/211 (6%)

Query: 115 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI TG  HT+++S    +++CG    G LGHG          R+      +V +  A  +
Sbjct: 54  QIATGANHTVVVSEGGGLWTCGRGRHGQLGHG-HFNDAGPLQRLEALRGMNVTRAVAGGS 112

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK--------QVTAGL 225
           H   +   G V++ G       G  D +     P+    +K VPC         +  AG 
Sbjct: 113 HTVCLTDCGSVWSWGACRYGQLGLGD-DWEGRTPKNGVWIK-VPCACGDRCKIVRAAAGG 170

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
           N +  LT  G V T GSN++GQLGHGD   R     +  L     +  +  G  +  AV 
Sbjct: 171 NHSAVLTACGAVMTTGSNSYGQLGHGDIKKRYAFTRVESLRGS-RLATVDCGEDHTGAVG 229

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
            +G +Y +G G    LG G+      P  + 
Sbjct: 230 DSGRLYLWGRGDWGQLGSGDGRSHWSPAPVN 260


>gi|444725178|gb|ELW65756.1| putative E3 ubiquitin-protein ligase HERC4 [Tupaia chinensis]
          Length = 870

 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/185 (31%), Positives = 89/185 (48%), Gaps = 4/185 (2%)

Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
           S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L G+P  Q
Sbjct: 9   SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQ 68

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           V AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V I  G  +
Sbjct: 69  VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCGEDH 127

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LD 339
             A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +H  A + 
Sbjct: 128 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVP 185

Query: 340 SSGYV 344
           SSG +
Sbjct: 186 SSGRI 190



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   I        +QV+A  
Sbjct: 14  VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGG 73

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 74  AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 132

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 133 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 190

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 191 YSFGLGGNGQLGTGSTSNRKSPFTVK 216



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 67/136 (49%), Gaps = 4/136 (2%)

Query: 208 RLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLE 266
           R +++L  +   QV  G   +  L+    V   G N +GQLG G D   + +P+ I  L 
Sbjct: 3   RNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLL 62

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
            +   +Q+AAG ++   +T +G ++ +G      LG  +++D   P  +++ R + I  V
Sbjct: 63  GI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKI--V 119

Query: 327 RVSAGDEHVVALDSSG 342
            +  G++H  AL   G
Sbjct: 120 YICCGEDHTAALTKEG 135


>gi|449476139|ref|XP_004154652.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101226798 [Cucumis sativus]
          Length = 1103

 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 71/241 (29%), Positives = 108/241 (44%), Gaps = 21/241 (8%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G YHT  ++ S     +  G+   G+LGHG + +  V   R+  P    H+  +S  
Sbjct: 365 VACGEYHTCAVTLSGDLYTWGDGTYNSGLLGHGKDVSHWVP-KRVTGPLQGLHISSISCG 423

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H A V  +G++FT GD +    GH D +  I  PR VE+LKG+   +   G+  T  +
Sbjct: 424 PWHTALVTSAGKLFTFGDGTFGVLGHGDRD-SISIPREVESLKGLRTVRAACGVWHTAAV 482

Query: 232 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
                          G + T G    G+LGHGD   R  P  +A L E  +  Q+A G S
Sbjct: 483 VEVIIGNPNSNNNSSGKLFTWGDGDKGRLGHGDKEARLVPTCVAALVEP-NFCQVACGHS 541

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
             +A+T +G +Y+ GS     LG+ +   +L  R      +    V  ++ G  HV  L 
Sbjct: 542 LTVALTNSGHIYTMGSPVYGQLGNPQADGKLPARVEGKLSKS--FVEELACGAYHVAVLT 599

Query: 340 S 340
           S
Sbjct: 600 S 600



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/177 (30%), Positives = 90/177 (50%), Gaps = 7/177 (3%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  ++    HAA V + G+VF+ G+      GH   +     P+L++AL  +  + V  G
Sbjct: 310 VQNIACGNRHAALVTKQGEVFSWGEEYGGRLGH-GGDSDAHHPKLIDALSNLNIELVACG 368

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYM 281
              T  +T+ G ++T G  T+  G LGHG  +    PK +  PL+ +  +  I+ GP + 
Sbjct: 369 EYHTCAVTLSGDLYTWGDGTYNSGLLGHGKDVSHWVPKRVTGPLQGL-HISSISCGPWHT 427

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             VT  G +++FG G+   LGHG++     PR +++   KG+  VR + G  H  A+
Sbjct: 428 ALVTSAGKLFTFGDGTFGVLGHGDRDSISIPREVESL--KGLRTVRAACGVWHTAAV 482



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 102/225 (45%), Gaps = 18/225 (8%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           I+ G +HT L++++  +F+ G    GVLGHG   +  +S  R +        V+ +    
Sbjct: 420 ISCGPWHTALVTSAGKLFTFGDGTFGVLGHGDRDS--ISIPREVESLKGLRTVRAACGVW 477

Query: 174 HAAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
           H A V++            SG++FT GD      GH D    +  P  V AL      QV
Sbjct: 478 HTAAVVEVIIGNPNSNNNSSGKLFTWGDGDKGRLGHGDKEARLV-PTCVAALVEPNFCQV 536

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
             G + T  LT  GH++T GS  +GQLG+    D   P  +        V ++A G  ++
Sbjct: 537 ACGHSLTVALTNSGHIYTMGSPVYGQLGNPQA-DGKLPARVEGKLSKSFVEELACGAYHV 595

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
             +T    VY++G G+N  LGHG   D   P  ++  + K +  +
Sbjct: 596 AVLTSRTEVYTWGKGANGRLGHGSTDDRNTPTLVEALKDKQVKSI 640



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 67/255 (26%), Positives = 110/255 (43%), Gaps = 26/255 (10%)

Query: 105 DIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH 164
           D+   + GN      R+  L+     VFS G    G LGHG + +       I+  S  +
Sbjct: 309 DVQNIACGN------RHAALVTKQGEVFSWGEEYGGRLGHGGD-SDAHHPKLIDALSNLN 361

Query: 165 VVQVSASENHAAFVLQSGQVFTCGD---NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
           +  V+  E H   V  SG ++T GD   NS      +D +  + + R+   L+G+    +
Sbjct: 362 IELVACGEYHTCAVTLSGDLYTWGDGTYNSGLLGHGKDVSHWVPK-RVTGPLQGLHISSI 420

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
           + G   T  +T  G + T G  T G LGHGD      P+ +  L+ +   V+ A G  + 
Sbjct: 421 SCGPWHTALVTSAGKLFTFGDGTFGVLGHGDRDSISIPREVESLKGL-RTVRAACGVWHT 479

Query: 282 LAVT------------GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
            AV              +G ++++G G    LGHG++   L P  +        +  +V+
Sbjct: 480 AAVVEVIIGNPNSNNNSSGKLFTWGDGDKGRLGHGDKEARLVPTCVAALVEP--NFCQVA 537

Query: 330 AGDEHVVALDSSGYV 344
            G    VAL +SG++
Sbjct: 538 CGHSLTVALTNSGHI 552



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 71/140 (50%), Gaps = 4/140 (2%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E++  +  + +  G      +T +G V + G    G+LGHG   D   PK I  L 
Sbjct: 299 PKALESVVVLDVQNIACGNRHAALVTKQGEVFSWGEEYGGRLGHGGDSDAHHPKLIDALS 358

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS--NFCLGHGEQHDELQPRAIQTFRRKGIH 324
            + ++  +A G  +  AVT +G +Y++G G+  +  LGHG+      P+ + T   +G+H
Sbjct: 359 NL-NIELVACGEYHTCAVTLSGDLYTWGDGTYNSGLLGHGKDVSHWVPKRV-TGPLQGLH 416

Query: 325 VVRVSAGDEHVVALDSSGYV 344
           +  +S G  H   + S+G +
Sbjct: 417 ISSISCGPWHTALVTSAGKL 436



 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 51/194 (26%), Positives = 85/194 (43%), Gaps = 12/194 (6%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQC 151
           R +R    V H++ +VE       +  G  ++   S+  +F+ G    G LGHG +  + 
Sbjct: 468 RTVRAACGVWHTAAVVE-------VIIGNPNSNNNSSGKLFTWGDGDKGRLGHGDKEARL 520

Query: 152 VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE 211
           V  T +      +  QV+   +    +  SG ++T G       G+   +  +  P  VE
Sbjct: 521 VP-TCVAALVEPNFCQVACGHSLTVALTNSGHIYTMGSPVYGQLGNPQADGKL--PARVE 577

Query: 212 A-LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 270
             L     +++  G      LT R  V+T G   +G+LGHG T DR TP  +  L++   
Sbjct: 578 GKLSKSFVEELACGAYHVAVLTSRTEVYTWGKGANGRLGHGSTDDRNTPTLVEALKD-KQ 636

Query: 271 VVQIAAGPSYMLAV 284
           V  IA G ++  A+
Sbjct: 637 VKSIACGTNFTAAI 650


>gi|348563524|ref|XP_003467557.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like [Cavia
           porcellus]
          Length = 1016

 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 71/245 (28%), Positives = 114/245 (46%), Gaps = 23/245 (9%)

Query: 112 GNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGH-------GPETTQCVSFTRINFPSAA 163
           G +Q  +G  H LL+ +N  V +CG +  G LG         PE  Q +    +N P   
Sbjct: 30  GLLQAASGERHALLLLTNQVVHACGDNSGGQLGRRGAPSGKQPEPIQAL----VNLP--- 82

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
            V  VS  + H+  V   G+VF  G  S    G        F P+ ++AL G+   Q++ 
Sbjct: 83  -VDLVSCGKEHSLAVCHKGKVFAWGVGSDGQLGTGKFEEICFIPQKIKALTGIKIIQISC 141

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYML 282
           G   +  L+  G V + G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  
Sbjct: 142 GYYHSLALSKDGQVFSWGKNSHGQLGLGQEFPSQASPQRVRSLEGI-PLAQVAAGGAHSF 200

Query: 283 AVTGNGVVYSFGSGSNFCL---GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
           A++ +G  + +G+ S   L   G+       +PR++   +  G  VV +S G EH   L 
Sbjct: 201 ALSLSGTSFGWGNNSAGQLAFSGNNVLVQSYKPRSVGALKNLG--VVYISCGYEHTAVLT 258

Query: 340 SSGYV 344
            +  V
Sbjct: 259 QNDQV 263



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 63/226 (27%), Positives = 105/226 (46%), Gaps = 8/226 (3%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           ++ G+ H+L + +   VF+ G    G LG G     C    +I   +   ++Q+S    H
Sbjct: 86  VSCGKEHSLAVCHKGKVFAWGVGSDGQLGTGKFEEICFIPQKIKALTGIKIIQISCGYYH 145

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           +  + + GQVF+ G NS    G          P+ V +L+G+P  QV AG   +  L++ 
Sbjct: 146 SLALSKDGQVFSWGKNSHGQLGLGQEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLS 205

Query: 235 GHVHTCGSNTHGQL---GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           G     G+N+ GQL   G+   +    P+S+  L+ +G VV I+ G  +   +T N  V+
Sbjct: 206 GTSFGWGNNSAGQLAFSGNNVLVQSYKPRSVGALKNLG-VVYISCGYEHTAVLTQNDQVF 264

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           +FG  S   LGH        P+ ++     G  V ++  G  H +A
Sbjct: 265 TFGDNSFGQLGHNGVSQTTGPQLVEGI---GGPVSQIDCGSYHTLA 307



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 62/185 (33%), Positives = 86/185 (46%), Gaps = 6/185 (3%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QI+ G YH+L +S +  VFS G +  G LG G E     S  R+       + QV+A  
Sbjct: 137 IQISCGYYHSLALSKDGQVFSWGKNSHGQLGLGQEFPSQASPQRVRSLEGIPLAQVAAGG 196

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPI--FRPRLVEALKGVPCKQVTAGLNFTGF 230
            H+  +  SG  F  G+NS+        N  +  ++PR V ALK +    ++ G   T  
Sbjct: 197 AHSFALSLSGTSFGWGNNSAGQLAFSGNNVLVQSYKPRSVGALKNLGVVYISCGYEHTAV 256

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA-VTGNGV 289
           LT    V T G N+ GQLGH        P+ +  +   G V QI  G  + LA V   G 
Sbjct: 257 LTQNDQVFTFGDNSFGQLGHNGVSQTTGPQLVEGIG--GPVSQIDCGSYHTLAYVYTTGQ 314

Query: 290 VYSFG 294
           V SFG
Sbjct: 315 VVSFG 319


>gi|348508280|ref|XP_003441682.1| PREDICTED: leucine-rich repeat and WD repeat-containing protein
            KIAA1239-like [Oreochromis niloticus]
          Length = 2697

 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 98/207 (47%), Gaps = 10/207 (4%)

Query: 115  QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
            Q+  G  H+L L     VFS G +  G LG G E     +   I   +   V Q++A   
Sbjct: 1818 QVACGNSHSLALTKGGDVFSWGLNSHGQLGLGKEVPVQHTPVIICALAGVAVTQIAAGGT 1877

Query: 174  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR----LVEALKGVPCKQVTAGLNFTG 229
            H+ F+  +  V+ CG N    CG    NR   + R    +V AL+ +    ++ G + + 
Sbjct: 1878 HSLFLTLADLVYCCGANK---CGQLGVNRVDEKGRFNICMVPALRPLSVSFISCGESHSA 1934

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             LT  G V+T G  + GQLGH  + +   PK +A L+  G   QIA G  + L +  +G 
Sbjct: 1935 VLTKDGKVYTFGDGSQGQLGHSTSANEVKPKLVAGLD--GPASQIACGRHHTLVLGSSGQ 1992

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQ 316
            +++FGSG+    G+G     L P  +Q
Sbjct: 1993 LWAFGSGAKGQTGNGHNDSCLTPTLVQ 2019



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 67/232 (28%), Positives = 101/232 (43%), Gaps = 6/232 (2%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
            +I  G  HTL + ++ +V SCG +  G LG   +    +        +   VV ++  ++
Sbjct: 1715 KICCGDRHTLFLNADGNVLSCGHNSQGQLGRQKKKNGKII---AQVEALGSVVAMACGQD 1771

Query: 174  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
            H   V  SG VF+ G       G   T     RP  V     +P  QV  G + +  LT 
Sbjct: 1772 HCLAVSASGHVFSWGAGEDGQLGLLPTPSSSHRPSKVPIPLPIPIIQVACGNSHSLALTK 1831

Query: 234  RGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G V + G N+HGQLG G  +  + TP  I  L  V +V QIAAG ++ L +T   +VY 
Sbjct: 1832 GGDVFSWGLNSHGQLGLGKEVPVQHTPVIICALAGV-AVTQIAAGGTHSLFLTLADLVYC 1890

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             G+     LG     ++ +         + + V  +S G+ H   L   G V
Sbjct: 1891 CGANKCGQLGVNRVDEKGRFNICMVPALRPLSVSFISCGESHSAVLTKDGKV 1942


>gi|310819121|ref|YP_003951479.1| regulator of chromosome condensation-like protein [Stigmatella
           aurantiaca DW4/3-1]
 gi|309392193|gb|ADO69652.1| regulator of chromosome condensation-like protein [Stigmatella
           aurantiaca DW4/3-1]
          Length = 732

 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 75/230 (32%), Positives = 109/230 (47%), Gaps = 14/230 (6%)

Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  H+L+  S+ +V++ G+++ G  G G   T   S   +   + +    V+A + H
Sbjct: 337 VAAGETHSLVARSDGTVWAWGNNIEGQRGDGSAKT---STAPVQVTALSGGFTVAAGKAH 393

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           A  V   G V+  G N     G   T      P  V  L G     V AG + +  L + 
Sbjct: 394 ALAVRSDGTVWAWGQNLFGQLGD-GTRMQRTAPVQVTGLSG--GVAVAAGDDHSLGLCLD 450

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G V   G NT GQLG G T  RP P  +    E+  VV +AAG S+ LAV+ +G V+++G
Sbjct: 451 GTVWAWGQNTSGQLGDGTTAQRPAPVQV---TELSGVVAVAAGTSHSLAVSSDGTVWAWG 507

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           S ++  LG G     L P  +Q     G  VV V+AG  H +A+ S G V
Sbjct: 508 SNASGQLGDGTTRARLTP--VQVAGLSG--VVAVAAGYFHSLAVRSDGTV 553



 Score = 79.0 bits (193), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 83/253 (32%), Positives = 120/253 (47%), Gaps = 24/253 (9%)

Query: 99  SVEHSSDIVETSA--GNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGP--ETTQCVS 153
           S + S+  V+ +A  G   +  G+ H L + S+ +V++ G +L G LG G   + T  V 
Sbjct: 368 SAKTSTAPVQVTALSGGFTVAAGKAHALAVRSDGTVWAWGQNLFGQLGDGTRMQRTAPVQ 427

Query: 154 FTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEA 212
            T ++       V V+A ++H+  +   G V+  G N+S   G   T  RP   P  V  
Sbjct: 428 VTGLSGG-----VAVAAGDDHSLGLCLDGTVWAWGQNTSGQLGDGTTAQRPA--PVQVTE 480

Query: 213 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
           L GV    V AG + +  ++  G V   GSN  GQLG G T  R TP  +A L     VV
Sbjct: 481 LSGVVA--VAAGTSHSLAVSSDGTVWAWGSNASGQLGDGTTRARLTPVQVAGLS---GVV 535

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH-VVRVSAG 331
            +AAG  + LAV  +G V+++G+ S F LG G       P      R  G+   V  +AG
Sbjct: 536 AVAAGYFHSLAVRSDGTVWAWGNNSFFQLGDGTNTQRPTP-----VRVPGLSGGVAAAAG 590

Query: 332 DEHVVALDSSGYV 344
             H + L S G V
Sbjct: 591 YFHSLVLRSDGTV 603



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 74/232 (31%), Positives = 105/232 (45%), Gaps = 18/232 (7%)

Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGP--ETTQCVSFTRINFPSAAHVVQVSASE 172
           +  G  H+L I S+ + ++ G +  G LG G     T+ V  T ++   A     V+A +
Sbjct: 87  VAAGSSHSLAIRSDGTAWAWGHNGSGELGDGTTFRRTRPVQVTGLSEAEA-----VAAGD 141

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  V   G V+  G NS    G   T R    P  V  L G    +V AG   +  + 
Sbjct: 142 GHSLVVRSDGTVWAWGWNSDGQLGD-GTTRERHVPVQVAGLSG--GVKVAAGDGHSLAVC 198

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
           + G V   G N  GQLG G T+ R  P  +A L     VV +AAG S+ LAV  +G V++
Sbjct: 199 LDGTVWAWGRNDSGQLGDGTTVQRSAPVQVAGLS---GVVAVAAGSSHSLAVRSDGTVWA 255

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           +G  S+  LG G     L P  +          V V+AG  H +A+ S G V
Sbjct: 256 WGRNSDGQLGDGTTSARLTPVQVTGLSGG----VAVAAGMFHSLAVRSDGTV 303



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 71/240 (29%), Positives = 107/240 (44%), Gaps = 24/240 (10%)

Query: 111 AGNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G + +  G  H+L +S + +V++ GS+  G LG G   T     T +     + VV V+
Sbjct: 482 SGVVAVAAGTSHSLAVSSDGTVWAWGSNASGQLGDG---TTRARLTPVQVAGLSGVVAVA 538

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
           A   H+  V   G V+  G+NS F  G   +T RP   P  V  L G     V A   + 
Sbjct: 539 AGYFHSLAVRSDGTVWAWGNNSFFQLGDGTNTQRPT--PVRVPGLSG----GVAAAAGYF 592

Query: 229 GFLTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG--SVVQIAAGPSYMLAV 284
             L +R  G V   G+N +GQLG+G         S +P++  G    V +AAG    LAV
Sbjct: 593 HSLVLRSDGTVWGWGNNAYGQLGNG-----TANASFSPVQVTGLSGGVAVAAGDFQSLAV 647

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             +G V ++G      LG G     L P  +          + V+AG+   +A+ S G +
Sbjct: 648 RSDGTVRAWGDNIYGQLGDGTVTTRLAPVGVNGLSGG----MAVAAGNGFSLAVHSGGML 703



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 106/233 (45%), Gaps = 20/233 (8%)

Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  H+L++ S+ +V++ G +  G LG G    + V    +     +  V+V+A + H
Sbjct: 137 VAAGDGHSLVVRSDGTVWAWGWNSDGQLGDGTTRERHVP---VQVAGLSGGVKVAAGDGH 193

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           +  V   G V+  G N S   G   T +    P  V  L GV    V AG + +  L +R
Sbjct: 194 SLAVCLDGTVWAWGRNDSGQLGDGTTVQR-SAPVQVAGLSGVVA--VAAGSSHS--LAVR 248

Query: 235 --GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G V   G N+ GQLG G T  R TP  +  L      V +AAG  + LAV  +G V++
Sbjct: 249 SDGTVWAWGRNSDGQLGDGTTSARLTPVQVTGLS---GGVAVAAGMFHSLAVRSDGTVWA 305

Query: 293 FGSGSNFCLGHGEQHDELQP-RAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           +G  +   LG G     L P +AI     +      V+AG+ H +   S G V
Sbjct: 306 WGQNTRGQLGDGSMTASLTPVQAIGLSEGE-----AVAAGETHSLVARSDGTV 353



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/197 (28%), Positives = 93/197 (47%), Gaps = 14/197 (7%)

Query: 111 AGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G + +  G +H+L + S+ +V++ G++    LG G  T +    T +  P  +  V  +
Sbjct: 532 SGVVAVAAGYFHSLAVRSDGTVWAWGNNSFFQLGDGTNTQRP---TPVRVPGLSGGVAAA 588

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
           A   H+  +   G V+  G+N+    G+   N   F P  V  L G     V AG +F  
Sbjct: 589 AGYFHSLVLRSDGTVWGWGNNAYGQLGNGTANAS-FSPVQVTGLSG--GVAVAAG-DFQ- 643

Query: 230 FLTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
            L +R  G V   G N +GQLG G    R  P  +  L      + +AAG  + LAV   
Sbjct: 644 SLAVRSDGTVRAWGDNIYGQLGDGTVTTRLAPVGVNGLS---GGMAVAAGNGFSLAVHSG 700

Query: 288 GVVYSFGSGSNFCLGHG 304
           G+++++G  ++  LGHG
Sbjct: 701 GMLHAWGYNTDGQLGHG 717



 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/116 (33%), Positives = 55/116 (47%), Gaps = 9/116 (7%)

Query: 231 LTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
           L IR  G V   GSNT GQLG G T +R  P  +  L +    V +AAG S+ LA+  +G
Sbjct: 45  LAIRPDGTVWAAGSNTSGQLGDGTTSERRVPAQVVGLSD---AVLVAAGSSHSLAIRSDG 101

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             +++G   +  LG G      +P  +            V+AGD H + + S G V
Sbjct: 102 TAWAWGHNGSGELGDGTTFRRTRPVQVTGLS----EAEAVAAGDGHSLVVRSDGTV 153


>gi|431911479|gb|ELK13685.1| Putative E3 ubiquitin-protein ligase HERC6 [Pteropus alecto]
          Length = 1010

 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/249 (27%), Positives = 115/249 (46%), Gaps = 18/249 (7%)

Query: 107 VETSAGNMQITTG----RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA 162
           V T AG  ++       R+  LL+S+ +V SCG +  G LG   +  +     R     A
Sbjct: 14  VPTGAGGAEVRQAACGERHSLLLLSDGTVHSCGDNTQGQLGRRGKPRE----ERPGLIKA 69

Query: 163 AHVVQV---SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 219
              + V   S  + H+  V   G+VF  G  S    G  +    IF P+ ++ L G+   
Sbjct: 70  LETLLVGLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIEECKEKIFTPKKIKTLTGIKII 129

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGP 278
           QV+ G   +  L+  G V++ G N+ GQLG G     + +P+ +  LE +  + Q+AAG 
Sbjct: 130 QVSCGHYHSLALSEDGQVYSWGKNSQGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGG 188

Query: 279 SYMLAVTGNGVVYSFGSGSNFCL---GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           ++  A++ +G  + +GS +   L   G+       +P +I     K + V+ +S G EH 
Sbjct: 189 AHSFALSLSGTSFGWGSNNTGQLALSGNNTPVQRYKPHSIGAL--KSLDVIYISCGYEHT 246

Query: 336 VALDSSGYV 344
             L  +G V
Sbjct: 247 AVLTQNGKV 255



 Score = 78.2 bits (191), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 61/189 (32%), Positives = 91/189 (48%), Gaps = 6/189 (3%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++ G YH+L +S +  V+S G +  G LG G E     S  R+       + QV+A  
Sbjct: 129 IQVSCGHYHSLALSEDGQVYSWGKNSQGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGG 188

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPI--FRPRLVEALKGVPCKQVTAGLNFTGF 230
            H+  +  SG  F  G N++        N P+  ++P  + ALK +    ++ G   T  
Sbjct: 189 AHSFALSLSGTSFGWGSNNTGQLALSGNNTPVQRYKPHSIGALKSLDVIYISCGYEHTAV 248

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA-VTGNGV 289
           LT  G V T G N+ GQLG+  T  +  P+ +  ++  G V QI  G  + LA V   G 
Sbjct: 249 LTQNGKVFTFGDNSCGQLGYNPTAKKRGPQQVEGID--GLVSQIDCGSYHTLAYVYTTGE 306

Query: 290 VYSFGSGSN 298
           V SFG G N
Sbjct: 307 VVSFGRGRN 315



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 107/228 (46%), Gaps = 12/228 (5%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           ++ G+ H+L + +   VF+ G+   G LG      +  +  +I   +   ++QVS    H
Sbjct: 78  VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIEECKEKIFTPKKIKTLTGIKIIQVSCGHYH 137

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           +  + + GQV++ G NS    G          P+ V +L+G+P  QV AG   +  L++ 
Sbjct: 138 SLALSEDGQVYSWGKNSQGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLS 197

Query: 235 GHVHTCGSNTHGQL---GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           G     GSN  GQL   G+   + R  P SI  L+ +  V+ I+ G  +   +T NG V+
Sbjct: 198 GTSFGWGSNNTGQLALSGNNTPVQRYKPHSIGALKSL-DVIYISCGYEHTAVLTQNGKVF 256

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH--VVRVSAGDEHVVA 337
           +FG  S   LG+     +  P+ ++     GI   V ++  G  H +A
Sbjct: 257 TFGDNSCGQLGYNPTAKKRGPQQVE-----GIDGLVSQIDCGSYHTLA 299


>gi|158253947|gb|AAI48319.1| HERC2 protein [Homo sapiens]
          Length = 703

 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/221 (31%), Positives = 110/221 (49%), Gaps = 12/221 (5%)

Query: 130 SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFT 186
            V++CG +  G LG G  ++  V   R     +++VV+   V +   HA  +   G+VF+
Sbjct: 479 KVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 537

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G+      GH  +     +PRL+EALK    + +  G + +  LT  G ++T G   +G
Sbjct: 538 WGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 596

Query: 247 QLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGH 303
           +LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG 
Sbjct: 597 RLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGR 654

Query: 304 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G       P+ I+  R  G  V ++  G +  +AL  SG V
Sbjct: 655 GGSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVV 693



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 91/190 (47%), Gaps = 11/190 (5%)

Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
           SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 457 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 514

Query: 219 KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
           K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L +   +  IA 
Sbjct: 515 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL-KTKRIRDIAC 573

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
           G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 574 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 631

Query: 335 VVALDSSGYV 344
            +AL   G V
Sbjct: 632 TLALTDEGLV 641



 Score = 67.8 bits (164), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 83/180 (46%), Gaps = 5/180 (2%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 523 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 581

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
             SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 582 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 640

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 641 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 699



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 77/162 (47%), Gaps = 5/162 (3%)

Query: 183 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
           +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 427 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 485

Query: 243 NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
            T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 486 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 545

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           LGH  + +  +PR I+  + K I    ++ G  H  AL SSG
Sbjct: 546 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSG 585


>gi|449442577|ref|XP_004139058.1| PREDICTED: uncharacterized protein LOC101219074 [Cucumis sativus]
          Length = 1103

 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 71/241 (29%), Positives = 108/241 (44%), Gaps = 21/241 (8%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G YHT  ++ S     +  G+   G+LGHG + +  V   R+  P    H+  +S  
Sbjct: 365 VACGEYHTCAVTLSGDLYTWGDGTYNSGLLGHGKDVSHWVP-KRVTGPLQGLHISSISCG 423

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H A V  +G++FT GD +    GH D +  I  PR VE+LKG+   +   G+  T  +
Sbjct: 424 PWHTALVTSAGKLFTFGDGTFGVLGHGDRD-SISIPREVESLKGLRTVRAACGVWHTAAV 482

Query: 232 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
                          G + T G    G+LGHGD   R  P  +A L E  +  Q+A G S
Sbjct: 483 VEVIIGNPNSNNNSSGKLFTWGDGDKGRLGHGDKEARLVPTCVAALVEP-NFCQVACGHS 541

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
             +A+T +G +Y+ GS     LG+ +   +L  R      +    V  ++ G  HV  L 
Sbjct: 542 LTVALTNSGHIYTMGSPVYGQLGNPQADGKLPARVEGKLSKS--FVEELACGAYHVAVLT 599

Query: 340 S 340
           S
Sbjct: 600 S 600



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/177 (30%), Positives = 90/177 (50%), Gaps = 7/177 (3%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  ++    HAA V + G+VF+ G+      GH   +     P+L++AL  +  + V  G
Sbjct: 310 VQNIACGNRHAALVTKQGEVFSWGEEYGGRLGH-GGDSDAHHPKLIDALSNLNIELVACG 368

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYM 281
              T  +T+ G ++T G  T+  G LGHG  +    PK +  PL+ +  +  I+ GP + 
Sbjct: 369 EYHTCAVTLSGDLYTWGDGTYNSGLLGHGKDVSHWVPKRVTGPLQGL-HISSISCGPWHT 427

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             VT  G +++FG G+   LGHG++     PR +++   KG+  VR + G  H  A+
Sbjct: 428 ALVTSAGKLFTFGDGTFGVLGHGDRDSISIPREVESL--KGLRTVRAACGVWHTAAV 482



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 102/225 (45%), Gaps = 18/225 (8%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           I+ G +HT L++++  +F+ G    GVLGHG   +  +S  R +        V+ +    
Sbjct: 420 ISCGPWHTALVTSAGKLFTFGDGTFGVLGHGDRDS--ISIPREVESLKGLRTVRAACGVW 477

Query: 174 HAAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
           H A V++            SG++FT GD      GH D    +  P  V AL      QV
Sbjct: 478 HTAAVVEVIIGNPNSNNNSSGKLFTWGDGDKGRLGHGDKEARLV-PTCVAALVEPNFCQV 536

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
             G + T  LT  GH++T GS  +GQLG+    D   P  +        V ++A G  ++
Sbjct: 537 ACGHSLTVALTNSGHIYTMGSPVYGQLGNPQA-DGKLPARVEGKLSKSFVEELACGAYHV 595

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
             +T    VY++G G+N  LGHG   D   P  ++  + K +  +
Sbjct: 596 AVLTSRTEVYTWGKGANGRLGHGSTDDRNTPTLVEALKDKQVKSI 640



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 67/255 (26%), Positives = 110/255 (43%), Gaps = 26/255 (10%)

Query: 105 DIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH 164
           D+   + GN      R+  L+     VFS G    G LGHG + +       I+  S  +
Sbjct: 309 DVQNIACGN------RHAALVTKQGEVFSWGEEYGGRLGHGGD-SDAHHPKLIDALSNLN 361

Query: 165 VVQVSASENHAAFVLQSGQVFTCGD---NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
           +  V+  E H   V  SG ++T GD   NS      +D +  + + R+   L+G+    +
Sbjct: 362 IELVACGEYHTCAVTLSGDLYTWGDGTYNSGLLGHGKDVSHWVPK-RVTGPLQGLHISSI 420

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
           + G   T  +T  G + T G  T G LGHGD      P+ +  L+ +   V+ A G  + 
Sbjct: 421 SCGPWHTALVTSAGKLFTFGDGTFGVLGHGDRDSISIPREVESLKGL-RTVRAACGVWHT 479

Query: 282 LAVT------------GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
            AV              +G ++++G G    LGHG++   L P  +        +  +V+
Sbjct: 480 AAVVEVIIGNPNSNNNSSGKLFTWGDGDKGRLGHGDKEARLVPTCVAALVEP--NFCQVA 537

Query: 330 AGDEHVVALDSSGYV 344
            G    VAL +SG++
Sbjct: 538 CGHSLTVALTNSGHI 552



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 71/140 (50%), Gaps = 4/140 (2%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E++  +  + +  G      +T +G V + G    G+LGHG   D   PK I  L 
Sbjct: 299 PKALESVVVLDVQNIACGNRHAALVTKQGEVFSWGEEYGGRLGHGGDSDAHHPKLIDALS 358

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS--NFCLGHGEQHDELQPRAIQTFRRKGIH 324
            + ++  +A G  +  AVT +G +Y++G G+  +  LGHG+      P+ + T   +G+H
Sbjct: 359 NL-NIELVACGEYHTCAVTLSGDLYTWGDGTYNSGLLGHGKDVSHWVPKRV-TGPLQGLH 416

Query: 325 VVRVSAGDEHVVALDSSGYV 344
           +  +S G  H   + S+G +
Sbjct: 417 ISSISCGPWHTALVTSAGKL 436



 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 51/194 (26%), Positives = 85/194 (43%), Gaps = 12/194 (6%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQC 151
           R +R    V H++ +VE       +  G  ++   S+  +F+ G    G LGHG +  + 
Sbjct: 468 RTVRAACGVWHTAAVVE-------VIIGNPNSNNNSSGKLFTWGDGDKGRLGHGDKEARL 520

Query: 152 VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE 211
           V  T +      +  QV+   +    +  SG ++T G       G+   +  +  P  VE
Sbjct: 521 VP-TCVAALVEPNFCQVACGHSLTVALTNSGHIYTMGSPVYGQLGNPQADGKL--PARVE 577

Query: 212 A-LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 270
             L     +++  G      LT R  V+T G   +G+LGHG T DR TP  +  L++   
Sbjct: 578 GKLSKSFVEELACGAYHVAVLTSRTEVYTWGKGANGRLGHGSTDDRNTPTLVEALKD-KQ 636

Query: 271 VVQIAAGPSYMLAV 284
           V  IA G ++  A+
Sbjct: 637 VKSIACGTNFTAAI 650


>gi|219847607|ref|YP_002462040.1| chromosome condensation regulator RCC1 [Chloroflexus aggregans DSM
           9485]
 gi|219541866|gb|ACL23604.1| regulator of chromosome condensation RCC1 [Chloroflexus aggregans
           DSM 9485]
          Length = 776

 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 75/240 (31%), Positives = 109/240 (45%), Gaps = 20/240 (8%)

Query: 111 AGNMQITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G   I  G +HT    S+  V+  G +  G LG G  T +         PS   V  ++
Sbjct: 155 SGVTAIAAGGWHTCARTSSGGVWCWGGNYRGQLGDGTTTDRSTPVAVSGLPS--EVTAIA 212

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCG---HRDTNRPIFRPRLVEALKGVP--CKQVTAG 224
           A + H    + SG+V+  G N+    G   + D++ P+       A+ G+P     + AG
Sbjct: 213 AGDAHTCARMSSGEVWCWGGNNYGQLGDGSYTDSSTPV-------AVSGLPSGVTAIAAG 265

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
              T  LT  G V   G+N  GQLG+G T  R TP +++ L     V  IAAG  +  A+
Sbjct: 266 GVHTCALTGSGGVRCWGANYSGQLGNGLTFGRSTPGAVSGLPS--GVTAIAAGDYHTCAL 323

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           TG+G V+ +G   +  LG G       P A+         V  ++AGD H  AL SSG V
Sbjct: 324 TGSGGVWCWGGNYSGQLGDGTTTARSTPVAVSGLPSG---VETIAAGDYHTCALMSSGGV 380



 Score = 71.2 bits (173), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 77/240 (32%), Positives = 103/240 (42%), Gaps = 21/240 (8%)

Query: 111 AGNMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G   I  G  HT  ++ S  V+  G +  G LG G  T +         PS   V  ++
Sbjct: 512 SGVTAIAAGGVHTCALTGSGGVWCWGGNFAGQLGDGTTTDRSTPVAVSGLPSG--VTAIA 569

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNR--PIFRPRLVEALKGVP--CKQVTAG 224
           A + H   +  SG V+  G N     G    TNR  P+       A+ G+P     + AG
Sbjct: 570 AGDIHTCALTGSGGVWCWGGNDFGQLGDGTTTNRSTPV-------AVSGLPSGVTAIAAG 622

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
           L +T  LT  G V   G N  GQL  G T  R TP +++ L     V  IAAG  Y  A 
Sbjct: 623 LRYTCALTGSGGVWCWGYNLSGQLDDG-TTSRSTPVAVSGLPS--GVTAIAAGGWYTCAR 679

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           T +G V  +G+  +  LG G       P A+         V  ++AG EH  AL SSG V
Sbjct: 680 TSSGGVRCWGANGSGQLGDGTTTKRSTPVAVSGLPSG---VTAIAAGGEHTCALMSSGGV 736



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 74/240 (30%), Positives = 102/240 (42%), Gaps = 20/240 (8%)

Query: 111 AGNMQITTGRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G   I  G  HT  L S+  V+  GS+  G LG G  TT+         PS   V  ++
Sbjct: 104 SGVTAIAAGGAHTCALTSSGEVWCWGSNFYGQLGDGSYTTRSTPVAVSGLPSG--VTAIA 161

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCK--QVTAG 224
           A   H      SG V+  G N     G     D + P+       A+ G+P +   + AG
Sbjct: 162 AGGWHTCARTSSGGVWCWGGNYRGQLGDGTTTDRSTPV-------AVSGLPSEVTAIAAG 214

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
              T      G V   G N +GQLG G   D  TP +++ L     V  IAAG  +  A+
Sbjct: 215 DAHTCARMSSGEVWCWGGNNYGQLGDGSYTDSSTPVAVSGLPS--GVTAIAAGGVHTCAL 272

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           TG+G V  +G+  +  LG+G       P A+         V  ++AGD H  AL  SG V
Sbjct: 273 TGSGGVRCWGANYSGQLGNGLTFGRSTPGAVSGLPSG---VTAIAAGDYHTCALTGSGGV 329



 Score = 68.6 bits (166), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 79/243 (32%), Positives = 109/243 (44%), Gaps = 26/243 (10%)

Query: 111 AGNMQITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA-----AH 164
           +G   I  GR HT    S+  V+  G +  G LG G       SFT  + P A     + 
Sbjct: 410 SGVTAIAAGRLHTCARTSSGGVWCWGDNSDGQLGDG-------SFTDSSTPVAVSGLASG 462

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVP--CKQVT 222
           V  ++A   H   +  SG V+  G N+S   G       I+    V A+ G+P     + 
Sbjct: 463 VETIAAGGWHTCALTGSGGVWCWGRNNS---GQLGDGSTIYHITPV-AVSGLPSGVTAIA 518

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
           AG   T  LT  G V   G N  GQLG G T DR TP +++ L     V  IAAG  +  
Sbjct: 519 AGGVHTCALTGSGGVWCWGGNFAGQLGDGTTTDRSTPVAVSGLPS--GVTAIAAGDIHTC 576

Query: 283 AVTGNGVVYSFGSGSNFC-LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           A+TG+G V+ +G G++F  LG G   +   P A+         V  ++AG  +  AL  S
Sbjct: 577 ALTGSGGVWCWG-GNDFGQLGDGTTTNRSTPVAVSGLPSG---VTAIAAGLRYTCALTGS 632

Query: 342 GYV 344
           G V
Sbjct: 633 GGV 635



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 73/237 (30%), Positives = 100/237 (42%), Gaps = 14/237 (5%)

Query: 111 AGNMQITTGRYHTLLISNSSVFSC-GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G   I  G  HT  ++ S    C G++  G LG+G    +         PS   V  ++
Sbjct: 257 SGVTAIAAGGVHTCALTGSGGVRCWGANYSGQLGNGLTFGRSTPGAVSGLPSG--VTAIA 314

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVP--CKQVTAGLNF 227
           A + H   +  SG V+  G N S   G         R   V A+ G+P   + + AG   
Sbjct: 315 AGDYHTCALTGSGGVWCWGGNYS---GQLGDGTTTARSTPV-AVSGLPSGVETIAAGDYH 370

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           T  L   G V   G N  GQLG G T  R TP +++ L     V  IAAG  +  A T +
Sbjct: 371 TCALMSSGGVRCWGHNDRGQLGDGTTTARSTPVAVSGLPS--GVTAIAAGRLHTCARTSS 428

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G V+ +G  S+  LG G   D   P A+         V  ++AG  H  AL  SG V
Sbjct: 429 GGVWCWGDNSDGQLGDGSFTDSSTPVAVSGLASG---VETIAAGGWHTCALTGSGGV 482



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/185 (31%), Positives = 81/185 (43%), Gaps = 17/185 (9%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCG---HRDTNRPIFRPRLVEALKGVP--CK 219
           V  ++A   H      SG V+  G N     G   + D++ P+       A+ G+P    
Sbjct: 55  VTAIAAGGGHTCARTSSGGVWCWGGNDFGRLGDGSYTDSSTPV-------AVSGLPSGVT 107

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
            + AG   T  LT  G V   GSN +GQLG G    R TP +++ L     V  IAAG  
Sbjct: 108 AIAAGGAHTCALTSSGEVWCWGSNFYGQLGDGSYTTRSTPVAVSGLPS--GVTAIAAGGW 165

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
           +  A T +G V+ +G      LG G   D   P A+     +   V  ++AGD H  A  
Sbjct: 166 HTCARTSSGGVWCWGGNYRGQLGDGTTTDRSTPVAVSGLPSE---VTAIAAGDAHTCARM 222

Query: 340 SSGYV 344
           SSG V
Sbjct: 223 SSGEV 227



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 62/220 (28%), Positives = 93/220 (42%), Gaps = 16/220 (7%)

Query: 111 AGNMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G   I  G  HT  ++ S  V+  G +  G LG G  T +         PS   V  ++
Sbjct: 563 SGVTAIAAGDIHTCALTGSGGVWCWGGNDFGQLGDGTTTNRSTPVAVSGLPSG--VTAIA 620

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR--PIFRPRLVEALKGVP--CKQVTAGL 225
           A   +   +  SG V+  G N S       T+R  P+       A+ G+P     + AG 
Sbjct: 621 AGLRYTCALTGSGGVWCWGYNLSGQLDDGTTSRSTPV-------AVSGLPSGVTAIAAGG 673

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            +T   T  G V   G+N  GQLG G T  R TP +++ L     V  IAAG  +  A+ 
Sbjct: 674 WYTCARTSSGGVRCWGANGSGQLGDGTTTKRSTPVAVSGLPS--GVTAIAAGGEHTCALM 731

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
            +G V+ +G   +  LG G       P  + T    G+++
Sbjct: 732 SSGGVWCWGRNDSGQLGDGRPLYRTTPVDVVTSASWGVYL 771


>gi|332241905|ref|XP_003270125.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
           [Nomascus leucogenys]
          Length = 556

 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 95/218 (43%), Gaps = 4/218 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  +F  G++ CG LG G +    +   R++  +   +  +S  S  H       G+VFT
Sbjct: 69  NDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFT 127

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN  +    +   L      +V  G   +  LT  G V   G N  G
Sbjct: 128 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 187

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T+++P P+ +    +   VV IA G    +AV   G VY +G   N  LG G  
Sbjct: 188 QVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNS 247

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            +  QP   +    +GI V RV+ G  H + L   G V
Sbjct: 248 GN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQV 283



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 93/187 (49%), Gaps = 12/187 (6%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G YH+L L S+  VF+ G +  G +G G    Q +            VV ++  +
Sbjct: 160 IEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ 219

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
                V+ +G+V+  G N +   G  ++ N+P   P  V AL+G+  ++V  G   T  L
Sbjct: 220 MCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPT--PCRVAALQGIRVQRVACGYAHTLVL 277

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDR--PTPKSIAPLEEVGSVVQIAAGPS--YMLAVTGN 287
           T  G V+  G+N++GQLG G+  ++  PTP ++    E   +++IAA  S     A T  
Sbjct: 278 TDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTV----EKDRIIEIAACHSTHTSAAKTQG 333

Query: 288 GVVYSFG 294
           G VY +G
Sbjct: 334 GHVYMWG 340



 Score = 39.7 bits (91), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 53/116 (45%), Gaps = 3/116 (2%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE-EVGSVVQIAAGPSYMLAVTGNG 288
           + T+   +   G+N  G LG GD      P+ +  L  +  + +   +GP  +LA T  G
Sbjct: 65  YTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATT-EG 123

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            V+++G  +   LG+G  +  L P  I T       V+ V+ G  H + L S G V
Sbjct: 124 EVFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVIEVACGSYHSLVLTSDGEV 178


>gi|397480406|ref|XP_003811475.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2 [Pan
           paniscus]
 gi|426375451|ref|XP_004054552.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like isoform 3
           [Gorilla gorilla gorilla]
 gi|194376922|dbj|BAG63022.1| unnamed protein product [Homo sapiens]
          Length = 556

 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 95/218 (43%), Gaps = 4/218 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  +F  G++ CG LG G +    +   R++  +   +  +S  S  H       G+VFT
Sbjct: 69  NDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFT 127

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN  +    +   L      +V  G   +  LT  G V   G N  G
Sbjct: 128 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 187

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T+++P P+ +    +   VV IA G    +AV   G VY +G   N  LG G  
Sbjct: 188 QVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNS 247

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            +  QP   +    +GI V RV+ G  H + L   G V
Sbjct: 248 GN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQV 283



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 93/187 (49%), Gaps = 12/187 (6%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G YH+L L S+  VF+ G +  G +G G    Q +            VV ++  +
Sbjct: 160 IEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ 219

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
                V+ +G+V+  G N +   G  ++ N+P   P  V AL+G+  ++V  G   T  L
Sbjct: 220 MCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPT--PCRVAALQGIRVQRVACGYAHTLVL 277

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDR--PTPKSIAPLEEVGSVVQIAAGPS--YMLAVTGN 287
           T  G V+  G+N++GQLG G+  ++  PTP ++    E   +++IAA  S     A T  
Sbjct: 278 TDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTV----EKDRIIEIAACHSTHTSAAKTQG 333

Query: 288 GVVYSFG 294
           G VY +G
Sbjct: 334 GHVYMWG 340



 Score = 39.7 bits (91), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 53/116 (45%), Gaps = 3/116 (2%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE-EVGSVVQIAAGPSYMLAVTGNG 288
           + T+   +   G+N  G LG GD      P+ +  L  +  + +   +GP  +LA T  G
Sbjct: 65  YTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATT-EG 123

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            V+++G  +   LG+G  +  L P  I T       V+ V+ G  H + L S G V
Sbjct: 124 EVFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVIEVACGSYHSLVLTSDGEV 178


>gi|357137056|ref|XP_003570117.1| PREDICTED: uncharacterized protein LOC100825305 isoform 2
           [Brachypodium distachyon]
          Length = 940

 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 97/212 (45%), Gaps = 8/212 (3%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 189
           +F  G  L  VL     +   VS  R+ N      V  VS  E HAA V + G+VF+ G 
Sbjct: 170 IFVWGDVLGSVLDDRDTSKANVSLPRLLNSTQILDVQNVSCGEKHAAIVTKQGEVFSWGK 229

Query: 190 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
                 GH+  +  +  P+++E+L     K +  G   T  L I G +   G  TH    
Sbjct: 230 EDGGRLGHK-VSVGVLHPKIIESLAFTHVKAIAFGAKHTCALAISGELFEWGEGTHSLGV 288

Query: 250 HGDTLDRPTP---KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
             D   R      K   PLE V SVV++A G  +   ++ +G ++++G G+   LGHG+ 
Sbjct: 289 WDDQCQRSQWYPHKLFGPLEGV-SVVKMACGQWHTAIISSSGQLFTYGDGTFGVLGHGDT 347

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
               +P+ +++   KG+ V  V+ G  H  A+
Sbjct: 348 SSVARPKEVESL--KGLRVKAVACGPWHTAAI 377



 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 62/249 (24%), Positives = 104/249 (41%), Gaps = 31/249 (12%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQ 167
           ++ G  H  +++    VFS G    G LGH        P+  + ++FT        HV  
Sbjct: 208 VSCGEKHAAIVTKQGEVFSWGKEDGGRLGHKVSVGVLHPKIIESLAFT--------HVKA 259

Query: 168 VSASENHAAFVLQSGQVFTCGDNS-SFCCGHRDTNRPIFRP-RLVEALKGVPCKQVTAGL 225
           ++    H   +  SG++F  G+ + S         R  + P +L   L+GV   ++  G 
Sbjct: 260 IAFGAKHTCALAISGELFEWGEGTHSLGVWDDQCQRSQWYPHKLFGPLEGVSVVKMACGQ 319

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
             T  ++  G + T G  T G LGHGDT     PK +  L+ +  V  +A GP +  A+ 
Sbjct: 320 WHTAIISSSGQLFTYGDGTFGVLGHGDTSSVARPKEVESLKGL-RVKAVACGPWHTAAIV 378

Query: 286 G----------NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
                      +G ++++G      LGH ++  +L P  ++          +VS      
Sbjct: 379 EILGTVKSNAPSGKLFTWGDADRGKLGHSDKESKLVPTCVKALTDSDF--AQVSCAKALT 436

Query: 336 VALDSSGYV 344
           VAL  +G V
Sbjct: 437 VALTITGVV 445



 Score = 58.2 bits (139), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 62/234 (26%), Positives = 92/234 (39%), Gaps = 66/234 (28%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G++HT +IS+S  +F+ G    GVLGHG +T+       +       V  V+   
Sbjct: 313 VKMACGQWHTAIISSSGQLFTYGDGTFGVLGHG-DTSSVARPKEVESLKGLRVKAVACGP 371

Query: 173 NHAAFVLQ----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG-----VP 217
            H A +++          SG++FT GD      GH D    +  P  V+AL       V 
Sbjct: 372 WHTAAIVEILGTVKSNAPSGKLFTWGDADRGKLGHSDKESKLV-PTCVKALTDSDFAQVS 430

Query: 218 C-KQVTAGLNFTGF---------------------------------------------- 230
           C K +T  L  TG                                               
Sbjct: 431 CAKALTVALTITGVVFTIGSKEHGQLGSHRLDDSSICSVEGPLKTEFVREISSGSSHVAV 490

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
           LT+ G V T G  T GQLG G+ +DR +P  +  LE+   V  IA G ++ +AV
Sbjct: 491 LTMNGKVFTWGKGTEGQLGLGNYVDRSSPTLVEALED-KQVDSIACGSNFTVAV 543


>gi|449280347|gb|EMC87674.1| RCC1 and BTB domain-containing protein 2, partial [Columba livia]
          Length = 531

 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 96/219 (43%), Gaps = 4/219 (1%)

Query: 127 SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVF 185
            N  VF  G +  G LG G +    +   R++      +  +S  S  H     + G+V+
Sbjct: 44  ENDEVFVLGMNCSGCLGTG-DMQSTIEPRRLDSLCGKKIACLSYGSGPHVVLATEEGEVY 102

Query: 186 TCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH 245
           T G N+    G+  TN      ++   L      +V  G + +  LT  G V+T G N  
Sbjct: 103 TWGHNAYSQLGNGTTNHGFVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTWGYNNS 162

Query: 246 GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
           GQ+G G T ++P P+ +    +   VV IA G    +AV  NG VY +G   N  LG G 
Sbjct: 163 GQVGSGSTANQPIPRRVTSCLQNKIVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGS 222

Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             +  QP   +    +GI V RV+ G  H + L   G +
Sbjct: 223 SGN--QPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQI 259



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 95/185 (51%), Gaps = 8/185 (4%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G +H++ L S+  V++ G +  G +G G    Q +     +      VV ++  +
Sbjct: 136 IEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKIVVNIACGQ 195

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             +  V+++G+V+  G N +   G   + N+P   P  + AL+G+  ++V  G   T  L
Sbjct: 196 MCSMAVVENGEVYVWGYNGNGQLGLGSSGNQPT--PCRIAALQGIRVQRVACGYAHTLVL 253

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS--YMLAVTGNGV 289
           T  G ++  G+N++GQLG G+  ++  P ++   ++   V++IAA  S     A T +G 
Sbjct: 254 TDEGQIYAWGANSYGQLGTGNKSNQSYPTTVVVDKD--RVIEIAACHSAHTSAAKTQSGQ 311

Query: 290 VYSFG 294
           VY +G
Sbjct: 312 VYMWG 316


>gi|383456202|ref|YP_005370191.1| RCC1 repeat-containing protein [Corallococcus coralloides DSM 2259]
 gi|380729703|gb|AFE05705.1| RCC1 repeat-containing protein [Corallococcus coralloides DSM 2259]
          Length = 806

 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 73/234 (31%), Positives = 105/234 (44%), Gaps = 14/234 (5%)

Query: 112 GNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
           G   + +G YH+L L  + +V++ G +  G LG G   T      ++  P    V  ++A
Sbjct: 544 GVTALASGTYHSLALKQDGTVWAWGLNNLGQLGDG---TTVSRTEQMPVPGLTDVTALAA 600

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
           S  H+  + Q G V+T G NSS   G   T      P  V  L GV    + AGL  +  
Sbjct: 601 STYHSLALKQDGTVWTWGYNSSGQLGD-GTTASRLTPAQVPGLTGV--SAIAAGLVHSLA 657

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           L   G V   G NT GQLG+G  ++ P P  +  L  V +   IAAG  + LA+  +G  
Sbjct: 658 LKQDGTVWAWGRNTDGQLGNGAAVNSPVPVQVQGLTGVSA---IAAGSYHSLALKQDGTA 714

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           +S+G      LG+      L P  +Q        V  ++ GD H +AL   G V
Sbjct: 715 WSWGRNGTGQLGNETITGSLTPVQVQGL----TAVTALAGGDAHSMALLRDGTV 764



 Score = 45.1 bits (105), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 55/188 (29%), Positives = 77/188 (40%), Gaps = 14/188 (7%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPC 218
           PS   V  ++A   H+  V Q G     G N     G     +R +  P  V+ L G   
Sbjct: 438 PSPRRVTWIAAGGAHSLVVRQDGTADAWGHNGYGQLGDGTSVDRFLPGPVQVQGLTGATA 497

Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD--RPTPKSIAPLEEVGSVVQIAA 276
              TA    T  L   G V   G N  GQLG  DT+D  R TP   APL  +  V  +A+
Sbjct: 498 LSATA--YHTLALAQDGTVWGWGYNDSGQLG--DTVDMVRVTP---APLPGLTGVTALAS 550

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
           G  + LA+  +G V+++G  +   LG G      +   +         V  ++A   H +
Sbjct: 551 GTYHSLALKQDGTVWAWGLNNLGQLGDGTTVSRTEQMPVPGL----TDVTALAASTYHSL 606

Query: 337 ALDSSGYV 344
           AL   G V
Sbjct: 607 ALKQDGTV 614



 Score = 42.7 bits (99), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 62/145 (42%), Gaps = 7/145 (4%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G  H+L L  + +V++ G +  G LG+G      V    +       V  ++A   H
Sbjct: 648 IAAGLVHSLALKQDGTVWAWGRNTDGQLGNGAAVNSPVP---VQVQGLTGVSAIAAGSYH 704

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           +  + Q G  ++ G N +   G+ +T      P  V+ L  V    +  G   +  L   
Sbjct: 705 SLALKQDGTAWSWGRNGTGQLGN-ETITGSLTPVQVQGLTAV--TALAGGDAHSMALLRD 761

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTP 259
           G V T G N  G+LG G TLDR  P
Sbjct: 762 GTVWTWGYNAEGELGDGTTLDRTAP 786


>gi|357137054|ref|XP_003570116.1| PREDICTED: uncharacterized protein LOC100825305 isoform 1
           [Brachypodium distachyon]
          Length = 1005

 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 97/212 (45%), Gaps = 8/212 (3%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 189
           +F  G  L  VL     +   VS  R+ N      V  VS  E HAA V + G+VF+ G 
Sbjct: 235 IFVWGDVLGSVLDDRDTSKANVSLPRLLNSTQILDVQNVSCGEKHAAIVTKQGEVFSWGK 294

Query: 190 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
                 GH+  +  +  P+++E+L     K +  G   T  L I G +   G  TH    
Sbjct: 295 EDGGRLGHK-VSVGVLHPKIIESLAFTHVKAIAFGAKHTCALAISGELFEWGEGTHSLGV 353

Query: 250 HGDTLDRPTP---KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
             D   R      K   PLE V SVV++A G  +   ++ +G ++++G G+   LGHG+ 
Sbjct: 354 WDDQCQRSQWYPHKLFGPLEGV-SVVKMACGQWHTAIISSSGQLFTYGDGTFGVLGHGDT 412

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
               +P+ +++   KG+ V  V+ G  H  A+
Sbjct: 413 SSVARPKEVESL--KGLRVKAVACGPWHTAAI 442



 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 62/249 (24%), Positives = 104/249 (41%), Gaps = 31/249 (12%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQ 167
           ++ G  H  +++    VFS G    G LGH        P+  + ++FT        HV  
Sbjct: 273 VSCGEKHAAIVTKQGEVFSWGKEDGGRLGHKVSVGVLHPKIIESLAFT--------HVKA 324

Query: 168 VSASENHAAFVLQSGQVFTCGDNS-SFCCGHRDTNRPIFRP-RLVEALKGVPCKQVTAGL 225
           ++    H   +  SG++F  G+ + S         R  + P +L   L+GV   ++  G 
Sbjct: 325 IAFGAKHTCALAISGELFEWGEGTHSLGVWDDQCQRSQWYPHKLFGPLEGVSVVKMACGQ 384

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
             T  ++  G + T G  T G LGHGDT     PK +  L+ +  V  +A GP +  A+ 
Sbjct: 385 WHTAIISSSGQLFTYGDGTFGVLGHGDTSSVARPKEVESLKGL-RVKAVACGPWHTAAIV 443

Query: 286 G----------NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
                      +G ++++G      LGH ++  +L P  ++          +VS      
Sbjct: 444 EILGTVKSNAPSGKLFTWGDADRGKLGHSDKESKLVPTCVKALTDSDF--AQVSCAKALT 501

Query: 336 VALDSSGYV 344
           VAL  +G V
Sbjct: 502 VALTITGVV 510



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 62/234 (26%), Positives = 92/234 (39%), Gaps = 66/234 (28%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G++HT +IS+S  +F+ G    GVLGHG +T+       +       V  V+   
Sbjct: 378 VKMACGQWHTAIISSSGQLFTYGDGTFGVLGHG-DTSSVARPKEVESLKGLRVKAVACGP 436

Query: 173 NHAAFVLQ----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG-----VP 217
            H A +++          SG++FT GD      GH D    +  P  V+AL       V 
Sbjct: 437 WHTAAIVEILGTVKSNAPSGKLFTWGDADRGKLGHSDKESKLV-PTCVKALTDSDFAQVS 495

Query: 218 C-KQVTAGLNFTGF---------------------------------------------- 230
           C K +T  L  TG                                               
Sbjct: 496 CAKALTVALTITGVVFTIGSKEHGQLGSHRLDDSSICSVEGPLKTEFVREISSGSSHVAV 555

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
           LT+ G V T G  T GQLG G+ +DR +P  +  LE+   V  IA G ++ +AV
Sbjct: 556 LTMNGKVFTWGKGTEGQLGLGNYVDRSSPTLVEALED-KQVDSIACGSNFTVAV 608


>gi|55725019|emb|CAH89377.1| hypothetical protein [Pongo abelii]
          Length = 451

 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 95/218 (43%), Gaps = 4/218 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  +F  G++ CG LG G +    +   R++  +   +  +S  S  H       G+VFT
Sbjct: 69  NDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFT 127

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN  +    +   L      +V  G   +  LT  G V   G N  G
Sbjct: 128 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 187

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T+++P P+ +    +   VV IA G    +AV   G VY +G   N  LG G  
Sbjct: 188 QVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNS 247

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            +  QP   +    +GI V RV+ G  H + L   G V
Sbjct: 248 GN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQV 283



 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 93/187 (49%), Gaps = 12/187 (6%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G YH+L L S+  VF+ G +  G +G G    Q +            VV ++  +
Sbjct: 160 IEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ 219

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
                V+ +G+V+  G N +   G  ++ N+P   P  V AL+G+  ++V  G   T  L
Sbjct: 220 MCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPT--PCRVAALQGIRVQRVACGYAHTLVL 277

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDR--PTPKSIAPLEEVGSVVQIAAGPS--YMLAVTGN 287
           T  G V+  G+N++GQLG G+  ++  PTP ++    E   +++IAA  S     A T  
Sbjct: 278 TDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTV----EKDRIIEIAACHSTHTSAAKTQG 333

Query: 288 GVVYSFG 294
           G VY +G
Sbjct: 334 GHVYMWG 340



 Score = 39.3 bits (90), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 53/116 (45%), Gaps = 3/116 (2%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE-EVGSVVQIAAGPSYMLAVTGNG 288
           + T+   +   G+N  G LG GD      P+ +  L  +  + +   +GP  +LA T  G
Sbjct: 65  YTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATT-EG 123

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            V+++G  +   LG+G  +  L P  I T       V+ V+ G  H + L S G V
Sbjct: 124 EVFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVIEVACGSYHSLVLTSDGEV 178


>gi|4557445|ref|NP_001259.1| RCC1 and BTB domain-containing protein 2 [Homo sapiens]
 gi|197099869|ref|NP_001125174.1| RCC1 and BTB domain-containing protein 2 isoform 1 [Pongo abelii]
 gi|332241903|ref|XP_003270124.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
           [Nomascus leucogenys]
 gi|397480404|ref|XP_003811474.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1 [Pan
           paniscus]
 gi|426375447|ref|XP_004054550.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like isoform 1
           [Gorilla gorilla gorilla]
 gi|74739686|sp|O95199.1|RCBT2_HUMAN RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
           Full=Chromosome condensation 1-like; Short=CHC1-L;
           AltName: Full=RCC1-like G exchanging factor; AltName:
           Full=Regulator of chromosome condensation and BTB
           domain-containing protein 2
 gi|75042250|sp|Q5RCZ7.1|RCBT2_PONAB RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
           Full=Regulator of chromosome condensation and BTB
           domain-containing protein 2
 gi|3789799|gb|AAC79987.1| RCC1-like G exchanging factor RLG [Homo sapiens]
 gi|20810515|gb|AAH29052.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Homo sapiens]
 gi|32891797|gb|AAP88928.1| chromosome condensation 1-like [Homo sapiens]
 gi|55727208|emb|CAH90360.1| hypothetical protein [Pongo abelii]
 gi|119629204|gb|EAX08799.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2, isoform CRA_a [Homo sapiens]
 gi|123979830|gb|ABM81744.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [synthetic construct]
 gi|124000595|gb|ABM87806.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [synthetic construct]
 gi|189055081|dbj|BAG38065.1| unnamed protein product [Homo sapiens]
          Length = 551

 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 95/218 (43%), Gaps = 4/218 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  +F  G++ CG LG G +    +   R++  +   +  +S  S  H       G+VFT
Sbjct: 64  NDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFT 122

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN  +    +   L      +V  G   +  LT  G V   G N  G
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 182

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T+++P P+ +    +   VV IA G    +AV   G VY +G   N  LG G  
Sbjct: 183 QVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNS 242

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            +  QP   +    +GI V RV+ G  H + L   G V
Sbjct: 243 GN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQV 278



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 93/187 (49%), Gaps = 12/187 (6%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G YH+L L S+  VF+ G +  G +G G    Q +            VV ++  +
Sbjct: 155 IEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ 214

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
                V+ +G+V+  G N +   G  ++ N+P   P  V AL+G+  ++V  G   T  L
Sbjct: 215 MCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPT--PCRVAALQGIRVQRVACGYAHTLVL 272

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDR--PTPKSIAPLEEVGSVVQIAAGPS--YMLAVTGN 287
           T  G V+  G+N++GQLG G+  ++  PTP ++    E   +++IAA  S     A T  
Sbjct: 273 TDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTV----EKDRIIEIAACHSTHTSAAKTQG 328

Query: 288 GVVYSFG 294
           G VY +G
Sbjct: 329 GHVYMWG 335



 Score = 39.7 bits (91), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 53/116 (45%), Gaps = 3/116 (2%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE-EVGSVVQIAAGPSYMLAVTGNG 288
           + T+   +   G+N  G LG GD      P+ +  L  +  + +   +GP  +LA T  G
Sbjct: 60  YTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATT-EG 118

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            V+++G  +   LG+G  +  L P  I T       V+ V+ G  H + L S G V
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVIEVACGSYHSLVLTSDGEV 173


>gi|302760205|ref|XP_002963525.1| hypothetical protein SELMODRAFT_438355 [Selaginella moellendorffii]
 gi|300168793|gb|EFJ35396.1| hypothetical protein SELMODRAFT_438355 [Selaginella moellendorffii]
          Length = 430

 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/208 (29%), Positives = 94/208 (45%), Gaps = 3/208 (1%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HT  +++   ++  G    G LG G    + +    +       +  V+    H
Sbjct: 167 LAAGAEHTAAVTDGGKLYGWGWGRYGNLGLGDRGDRMLP-AEVPAVGDEKMCMVACGWRH 225

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V QSG+++T G +     GH D    +  P  V AL      QV+ G   T  LT  
Sbjct: 226 TIAVSQSGKLYTYGWSKYGQLGHGDYADHLL-PHQVAALAEFNITQVSGGWRHTVALTEA 284

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G ++  G N  GQ+G GD  D  +P+ I+   +   VVQ++ G  + +AVT    VYS+G
Sbjct: 285 GKLYGWGWNKFGQVGSGDVDDHTSPQLISIPGQHQRVVQVSCGWRHTVAVTDKNNVYSWG 344

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKG 322
            G++  LGHG+  D   P+ IQ     G
Sbjct: 345 RGTSGQLGHGDAVDRSAPKGIQALSADG 372



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/229 (28%), Positives = 109/229 (47%), Gaps = 7/229 (3%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           ++ G  HT+ L+S   V S G    G LGHG    + +    I   +   +  V+   +H
Sbjct: 10  VSAGASHTVALLSGQVVCSFGRGEDGQLGHGDAEDRHLPRI-IGALNDCEISLVACGADH 68

Query: 175 A-AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
             A+      +++ G       GH +++  +F P  ++AL+G+  +Q+  G +    +T 
Sbjct: 69  TTAYSATRLTIYSWGWGDFGRLGHGNSSD-LFVPHPIKALQGLEIRQIACGDSHCLAVTA 127

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V++ G N +GQLG GDT D   P  +   E V SV  +AAG  +  AVT  G +Y +
Sbjct: 128 DGEVYSWGRNQNGQLGLGDTDDSLVPHKLLAFEGV-SVKMLAAGAEHTAAVTDGGKLYGW 186

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           G G    LG G++ D + P  +     +   +  V+ G  H +A+  SG
Sbjct: 187 GWGRYGNLGLGDRGDRMLPAEVPAVGDE--KMCMVACGWRHTIAVSQSG 233



 Score = 64.7 bits (156), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 85/181 (46%), Gaps = 13/181 (7%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HT+ +S S  +++ G S  G LGHG      +   ++   +  ++ QVS    H
Sbjct: 219 VACGWRHTIAVSQSGKLYTYGWSKYGQLGHGDYADHLLPH-QVAALAEFNITQVSGGWRH 277

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK-----QVTAGLNFTG 229
              + ++G+++  G N     G  D +     P+L+     +P +     QV+ G   T 
Sbjct: 278 TVALTEAGKLYGWGWNKFGQVGSGDVDDHT-SPQLIS----IPGQHQRVVQVSCGWRHTV 332

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
            +T + +V++ G  T GQLGHGD +DR  PK I  L   G   +     S   AVTG+GV
Sbjct: 333 AVTDKNNVYSWGRGTSGQLGHGDAVDRSAPKGIQALSADGKACE-GLEKSPEPAVTGSGV 391

Query: 290 V 290
            
Sbjct: 392 A 392


>gi|163847891|ref|YP_001635935.1| chromosome condensation regulator RCC1 [Chloroflexus aurantiacus
           J-10-fl]
 gi|222525767|ref|YP_002570238.1| chromosome condensation regulator RCC1 [Chloroflexus sp. Y-400-fl]
 gi|163669180|gb|ABY35546.1| regulator of chromosome condensation RCC1 [Chloroflexus aurantiacus
           J-10-fl]
 gi|222449646|gb|ACM53912.1| regulator of chromosome condensation RCC1 [Chloroflexus sp.
           Y-400-fl]
          Length = 790

 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 75/231 (32%), Positives = 102/231 (44%), Gaps = 12/231 (5%)

Query: 116 ITTGRYHTLLISNSSVFSC-GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I TGRYHT  ++      C G +  G LG G    +      +   S   V  ++A  +H
Sbjct: 72  IATGRYHTCALTTGGGVKCWGDNSSGQLGDGTMNDRNTPVDVVGLESG--VAAIAAGGSH 129

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRP-RLVEALKGVPCKQVTAGLNFTGFLTI 233
              +  +G V   G N S   G+ +T  P   P  +VE  +GV    +TAG   T  LT 
Sbjct: 130 TCALTTNGGVKCWGANVSGQLGN-ETQIPYSAPVDVVELGRGV--FDITAGWEHTCALTT 186

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V   G N+ GQLG G T DR TP  +A LE    V  IAAG  +  A+T +G V  +
Sbjct: 187 GGGVKCWGDNSSGQLGDGTTNDRNTPVDVAGLES--GVAAIAAGEGHTCALTTSGGVKCW 244

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G      LG G  +  + P  +         V  ++ G EH  AL + G V
Sbjct: 245 GDNLEGQLGGGTIYSHITPVDVAGLESD---VAAIAVGWEHTCALTTVGGV 292



 Score = 68.2 bits (165), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 74/241 (30%), Positives = 96/241 (39%), Gaps = 10/241 (4%)

Query: 105 DIVETSAGNMQITTGRYHTLLISNSSVFSC-GSSLCGVLGHGPETTQCVSFTRINFPSAA 163
           D+VE   G   IT G  HT  ++      C G +  G LG G    +          S  
Sbjct: 163 DVVELGRGVFDITAGWEHTCALTTGGGVKCWGDNSSGQLGDGTTNDRNTPVDVAGLESG- 221

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
            V  ++A E H   +  SG V   GDN     G       I  P  V  L+      +  
Sbjct: 222 -VAAIAAGEGHTCALTTSGGVKCWGDNLEGQLGGGTIYSHI-TPVDVAGLE-SDVAAIAV 278

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G   T  LT  G V   G+N+ GQLG G   +R  P  +  LE    V  I AG  +  A
Sbjct: 279 GWEHTCALTTVGGVRCWGNNSSGQLGDGTMTERNVPVGVIGLES--GVTAITAGGGHTCA 336

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           +T  G V  +G+     LG+   H   QP         GI VV ++AG  H  AL +SG 
Sbjct: 337 LTTGGGVKCWGNNFYGQLGNVTAH---QPGIPVDVAGLGIGVVAIAAGGAHTCALTTSGG 393

Query: 344 V 344
           V
Sbjct: 394 V 394



 Score = 65.1 bits (157), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 70/236 (29%), Positives = 105/236 (44%), Gaps = 11/236 (4%)

Query: 105 DIVETSAGNMQITTGRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA 163
           D++  +     I  G +HT  L+++  V   G++  G LG G  + + +        S  
Sbjct: 520 DVIGLNGDVTAIAAGWWHTCALMTDGGVKCWGANDSGQLGDGTRSDRSIPVDVSGLGSG- 578

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
            V  ++A   H   +  SG V   G NSS+  G+    +P     +     GV    +TA
Sbjct: 579 -VAAITAGLFHTCALTTSGGVKCWGSNSSWQLGNITVGQPYIPVDVFGLWSGV--TAITA 635

Query: 224 GLNFTGFLTI-RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
           GL+ T  LT     V   G N  GQLG G T  R  P+++  LE  GS   IAAG ++  
Sbjct: 636 GLHHTCALTTGSAQVQCWGGNYDGQLGDGTTNLRRFPQTVIGLE--GSETAIAAGGAHTC 693

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           A+T +G +  +G      LG G  HD   P  +   R +  +V  ++AG  H  AL
Sbjct: 694 ALTVSGGMKCWGDNFYGQLGDGSMHDRSTP--VDVIRLES-NVDAIAAGFFHTCAL 746



 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 75/244 (30%), Positives = 100/244 (40%), Gaps = 16/244 (6%)

Query: 105 DIVETSAGNMQITTGRYHTLLISNSSVFSC-GSSLCGVLGHGPETTQCVSFTRINFPSAA 163
           D+     G + I  G  HT  ++ S    C G +    LG G  T +          S  
Sbjct: 367 DVAGLGIGVVAIAAGGAHTCALTTSGGVKCWGYNYDVQLGDGTTTARSTPVDVSGLES-- 424

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHR---DTNRPIFRPRLVEALKGVPCKQ 220
            VV ++A   H   +  SG V   G N +F  G     D N P+    L     G     
Sbjct: 425 DVVTITAGGAHTCALTTSGGVKCWGRNFNFQLGDGTMIDRNTPVDVIGL-----GSRVTA 479

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           +TAG N T  LT    V   GSN +GQLGHG      TP  +  L   G V  IAAG  +
Sbjct: 480 ITAGGNHTCALTTSDGVKCWGSNLYGQLGHGTMNFYGTPVDVIGLN--GDVTAIAAGWWH 537

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
             A+  +G V  +G+  +  LG G + D   P  +      G  V  ++AG  H  AL +
Sbjct: 538 TCALMTDGGVKCWGANDSGQLGDGTRSDRSIPVDVSGL---GSGVAAITAGLFHTCALTT 594

Query: 341 SGYV 344
           SG V
Sbjct: 595 SGGV 598



 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 80/190 (42%), Gaps = 13/190 (6%)

Query: 158 NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALK 214
           + PS  ++  ++    H   +   G V   GDNSS   G     D N P+    +V    
Sbjct: 62  SLPSLRNITAIATGRYHTCALTTGGGVKCWGDNSSGQLGDGTMNDRNTPV---DVVGLES 118

Query: 215 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 274
           GV    + AG + T  LT  G V   G+N  GQLG+   +    P  +  L     V  I
Sbjct: 119 GV--AAIAAGGSHTCALTTNGGVKCWGANVSGQLGNETQIPYSAPVDVVELGR--GVFDI 174

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 334
            AG  +  A+T  G V  +G  S+  LG G  +D   P  +         V  ++AG+ H
Sbjct: 175 TAGWEHTCALTTGGGVKCWGDNSSGQLGDGTTNDRNTPVDVAGLESG---VAAIAAGEGH 231

Query: 335 VVALDSSGYV 344
             AL +SG V
Sbjct: 232 TCALTTSGGV 241



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 63/204 (30%), Positives = 89/204 (43%), Gaps = 10/204 (4%)

Query: 105 DIVETSAGNMQITTGRYHTLLISNSSVFSC-GSSLCGVLGHGPETTQCVSFTRIN-FPSA 162
           D+    +G   IT G +HT  ++ S    C GS+    LG+    T    +  ++ F   
Sbjct: 571 DVSGLGSGVAAITAGLFHTCALTTSGGVKCWGSNSSWQLGN---ITVGQPYIPVDVFGLW 627

Query: 163 AHVVQVSASENHA-AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
           + V  ++A  +H  A    S QV   G N     G   TN   F P+ V  L+G     +
Sbjct: 628 SGVTAITAGLHHTCALTTGSAQVQCWGGNYDGQLGDGTTNLRRF-PQTVIGLEGSE-TAI 685

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
            AG   T  LT+ G +   G N +GQLG G   DR TP  +  LE   +V  IAAG  + 
Sbjct: 686 AAGGAHTCALTVSGGMKCWGDNFYGQLGDGSMHDRSTPVDVIRLES--NVDAIAAGFFHT 743

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGE 305
            A+T +  V  +G      LG G 
Sbjct: 744 CALTTDKGVKCWGDNFYAQLGDGR 767


>gi|62088666|dbj|BAD92780.1| RCC1-like G exchanging factor RLG variant [Homo sapiens]
          Length = 556

 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 95/218 (43%), Gaps = 4/218 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  +F  G++ CG LG G +    +   R++  +   +  +S  S  H       G+VFT
Sbjct: 69  NDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFT 127

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN  +    +   L      +V  G   +  LT  G V   G N  G
Sbjct: 128 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 187

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T+++P P+ +    +   VV IA G    +AV   G VY +G   N  LG G  
Sbjct: 188 QVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNS 247

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            +  QP   +    +GI V RV+ G  H + L   G V
Sbjct: 248 GN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQV 283



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 93/187 (49%), Gaps = 12/187 (6%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G YH+L L S+  VF+ G +  G +G G    Q +            VV ++  +
Sbjct: 160 IEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ 219

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
                V+ +G+V+  G N +   G  ++ N+P   P  V AL+G+  ++V  G   T  L
Sbjct: 220 MCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPT--PCRVAALQGIRVQRVACGYAHTLVL 277

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDR--PTPKSIAPLEEVGSVVQIAAGPS--YMLAVTGN 287
           T  G V+  G+N++GQLG G+  ++  PTP ++    E   +++IAA  S     A T  
Sbjct: 278 TDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTV----EKDRIIEIAACHSTHTSAAKTQG 333

Query: 288 GVVYSFG 294
           G VY +G
Sbjct: 334 GHVYMWG 340



 Score = 39.7 bits (91), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 53/116 (45%), Gaps = 3/116 (2%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE-EVGSVVQIAAGPSYMLAVTGNG 288
           + T+   +   G+N  G LG GD      P+ +  L  +  + +   +GP  +LA T  G
Sbjct: 65  YTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATT-EG 123

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            V+++G  +   LG+G  +  L P  I T       V+ V+ G  H + L S G V
Sbjct: 124 EVFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVIEVACGSYHSLVLTSDGEV 178


>gi|426375449|ref|XP_004054551.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like isoform 2
           [Gorilla gorilla gorilla]
          Length = 527

 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 95/218 (43%), Gaps = 4/218 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  +F  G++ CG LG G +    +   R++  +   +  +S  S  H       G+VFT
Sbjct: 40  NDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFT 98

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN  +    +   L      +V  G   +  LT  G V   G N  G
Sbjct: 99  WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 158

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T+++P P+ +    +   VV IA G    +AV   G VY +G   N  LG G  
Sbjct: 159 QVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNS 218

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            +  QP   +    +GI V RV+ G  H + L   G V
Sbjct: 219 GN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQV 254



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 93/187 (49%), Gaps = 12/187 (6%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G YH+L L S+  VF+ G +  G +G G    Q +            VV ++  +
Sbjct: 131 IEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ 190

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
                V+ +G+V+  G N +   G  ++ N+P   P  V AL+G+  ++V  G   T  L
Sbjct: 191 MCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPT--PCRVAALQGIRVQRVACGYAHTLVL 248

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDR--PTPKSIAPLEEVGSVVQIAAGPS--YMLAVTGN 287
           T  G V+  G+N++GQLG G+  ++  PTP ++    E   +++IAA  S     A T  
Sbjct: 249 TDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTV----EKDRIIEIAACHSTHTSAAKTQG 304

Query: 288 GVVYSFG 294
           G VY +G
Sbjct: 305 GHVYMWG 311



 Score = 39.7 bits (91), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 65/145 (44%), Gaps = 6/145 (4%)

Query: 203 PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 260
           PIF     E L+ +   C   +AG N   + T+   +   G+N  G LG GD      P+
Sbjct: 8   PIFSLCSEEELQLIRQACVFGSAG-NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPR 66

Query: 261 SIAPLE-EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
            +  L  +  + +   +GP  +LA T  G V+++G  +   LG+G  +  L P  I T  
Sbjct: 67  RLDSLNGKKIACLSYGSGPHIVLATT-EGEVFTWGHNAYSQLGNGTTNHGLVPCHIST-N 124

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYV 344
                V+ V+ G  H + L S G V
Sbjct: 125 LSNKQVIEVACGSYHSLVLTSDGEV 149


>gi|193785714|dbj|BAG51149.1| unnamed protein product [Homo sapiens]
          Length = 551

 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 95/218 (43%), Gaps = 4/218 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  +F  G++ CG LG G +    +   R++  +   +  +S  S  H       G+VFT
Sbjct: 64  NDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFT 122

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN  +    +   L      +V  G   +  LT  G V   G N  G
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 182

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T+++P P+ +    +   VV IA G    +AV   G VY +G   N  LG G  
Sbjct: 183 QVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNS 242

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            +  QP   +    +GI V RV+ G  H + L   G V
Sbjct: 243 GN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQV 278



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 93/187 (49%), Gaps = 12/187 (6%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G YH+L L S+  VF+ G +  G +G G    Q +            VV ++  +
Sbjct: 155 IEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ 214

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
                V+ +G+V+  G N +   G  ++ N+P   P  V AL+G+  ++V  G   T  L
Sbjct: 215 MCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPT--PCRVAALQGIRVQRVACGYAHTLVL 272

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDR--PTPKSIAPLEEVGSVVQIAAGPS--YMLAVTGN 287
           T  G V+  G+N++GQLG G+  ++  PTP ++    E   +++IAA  S     A T  
Sbjct: 273 TDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTV----EKDRIIEIAACHSTHTSAAKTQG 328

Query: 288 GVVYSFG 294
           G VY +G
Sbjct: 329 GHVYMWG 335



 Score = 39.7 bits (91), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 53/116 (45%), Gaps = 3/116 (2%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE-EVGSVVQIAAGPSYMLAVTGNG 288
           + T+   +   G+N  G LG GD      P+ +  L  +  + +   +GP  +LA T  G
Sbjct: 60  YTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATT-EG 118

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            V+++G  +   LG+G  +  L P  I T       V+ V+ G  H + L S G V
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVIEVACGSYHSLVLTSDGEV 173


>gi|397520491|ref|XP_003830350.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Pan paniscus]
 gi|410221280|gb|JAA07859.1| hect domain and RLD 4 [Pan troglodytes]
 gi|410259924|gb|JAA17928.1| hect domain and RLD 4 [Pan troglodytes]
          Length = 1049

 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   +        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 79.0 bits (193), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 107/226 (47%), Gaps = 7/226 (3%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGV 263



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 95/213 (44%), Gaps = 9/213 (4%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           P+ +++    GI  ++V+AG  H   L  SG +
Sbjct: 181 PQLLKSLL--GIPFMQVAAGGAHSFVLTLSGAI 211


>gi|355687448|gb|EHH26032.1| E3 ISG15--protein ligase HERC5 [Macaca mulatta]
          Length = 883

 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/191 (32%), Positives = 96/191 (50%), Gaps = 9/191 (4%)

Query: 130 SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 189
            +F+ G +L G LG G +     +   +   +   + Q+SA E H+  +  SG +++ G 
Sbjct: 91  ELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGK 150

Query: 190 NS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           N       GH ++      P L+EAL     + +  G + +  LT  G + T G+  HGQ
Sbjct: 151 NEFGQLGLGHTESKD---SPSLIEALDNQKVEFLACGGSHSALLTQDGLLFTFGAGKHGQ 207

Query: 248 LGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T +   P  +A L  VG+ V QIA G  + LA V+  G V+SFGSG +  LG+G 
Sbjct: 208 LGHNSTQNELRPCLVAEL--VGNRVTQIACGRWHTLAYVSDFGKVFSFGSGKDGQLGNGG 265

Query: 306 QHDELQPRAIQ 316
             D+L P  ++
Sbjct: 266 TLDQLIPLPVK 276



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 82/157 (52%), Gaps = 3/157 (1%)

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           SG++F  G N     G          P++VE L GVP  Q++AG   +  L++ G++++ 
Sbjct: 89  SGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSW 148

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
           G N  GQLG G T  + +P  I  L+    V  +A G S+   +T +G++++FG+G +  
Sbjct: 149 GKNEFGQLGLGHTESKDSPSLIEALDN-QKVEFLACGGSHSALLTQDGLLFTFGAGKHGQ 207

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           LGH    +EL+P  +      G  V +++ G  H +A
Sbjct: 208 LGHNSTQNELRPCLVAELV--GNRVTQIACGRWHTLA 242



 Score = 47.0 bits (110), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 66/148 (44%), Gaps = 20/148 (13%)

Query: 207 PRLVEALK----GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           PR +  L+    GV   QV AG    G  T  G +   G N HGQLG G    R  P + 
Sbjct: 60  PRRLAVLERGGAGVQVHQVLAGSG--GARTPSGELFAWGQNLHGQLGVG----RKFPSTT 113

Query: 263 AP--LEEVGSV--VQIAAGPSYMLAVTGNGVVYSFGSGS--NFCLGHGEQHDELQPRAIQ 316
            P  +E +  V   QI+AG ++ +A++ +G +YS+G        LGH E  D   P  I+
Sbjct: 114 TPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKD--SPSLIE 171

Query: 317 TFRRKGIHVVRVSAGDEHVVALDSSGYV 344
               + +    ++ G  H   L   G +
Sbjct: 172 ALDNQKVEF--LACGGSHSALLTQDGLL 197


>gi|114630750|ref|XP_001167753.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 8
           [Pan troglodytes]
 gi|410295452|gb|JAA26326.1| hect domain and RLD 4 [Pan troglodytes]
 gi|410333085|gb|JAA35489.1| hect domain and RLD 4 [Pan troglodytes]
          Length = 1057

 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   +        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 107/226 (47%), Gaps = 7/226 (3%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGV 263



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 95/213 (44%), Gaps = 9/213 (4%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           P+ +++    GI  ++V+AG  H   L  SG +
Sbjct: 181 PQLLKSLL--GIPFMQVAAGGAHSFVLTLSGAI 211


>gi|55730398|emb|CAH91921.1| hypothetical protein [Pongo abelii]
          Length = 527

 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 95/218 (43%), Gaps = 4/218 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  +F  G++ CG LG G +    +   R++  +   +  +S  S  H       G+VFT
Sbjct: 40  NDEIFVLGTNCCGCLGLG-DVRSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFT 98

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN  +    +   L      +V  G   +  LT  G V   G N  G
Sbjct: 99  WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 158

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T+++P P+ +    +   VV IA G    +AV   G VY +G   N  LG G  
Sbjct: 159 QVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNS 218

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            +  QP   +    +GI V RV+ G  H + L   G V
Sbjct: 219 GN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQV 254



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 93/187 (49%), Gaps = 12/187 (6%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G YH+L L S+  VF+ G +  G +G G    Q +            VV ++  +
Sbjct: 131 IEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ 190

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
                V+ +G+V+  G N +   G  ++ N+P   P  V AL+G+  ++V  G   T  L
Sbjct: 191 MCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPT--PCRVAALQGIRVQRVACGYAHTLVL 248

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDR--PTPKSIAPLEEVGSVVQIAAGPS--YMLAVTGN 287
           T  G V+  G+N++GQLG G+  ++  PTP ++    E   +++IAA  S     A T  
Sbjct: 249 TDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTV----EKDRIIEIAACHSTHTSAAKTQG 304

Query: 288 GVVYSFG 294
           G VY +G
Sbjct: 305 GHVYMWG 311



 Score = 39.7 bits (91), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 65/145 (44%), Gaps = 6/145 (4%)

Query: 203 PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 260
           PIF     E L+ +   C   +AG N   + T+   +   G+N  G LG GD      P+
Sbjct: 8   PIFSLCSEEELQLIRQACVFGSAG-NEVLYTTVNDEIFVLGTNCCGCLGLGDVRSTIEPR 66

Query: 261 SIAPLE-EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
            +  L  +  + +   +GP  +LA T  G V+++G  +   LG+G  +  L P  I T  
Sbjct: 67  RLDSLNGKKIACLSYGSGPHIVLATT-EGEVFTWGHNAYSQLGNGTTNHGLVPCHIST-N 124

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYV 344
                V+ V+ G  H + L S G V
Sbjct: 125 LSNKQVIEVACGSYHSLVLTSDGEV 149


>gi|397520493|ref|XP_003830351.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Pan paniscus]
 gi|410221282|gb|JAA07860.1| hect domain and RLD 4 [Pan troglodytes]
 gi|410259926|gb|JAA17929.1| hect domain and RLD 4 [Pan troglodytes]
          Length = 1057

 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   +        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 79.0 bits (193), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 107/226 (47%), Gaps = 7/226 (3%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGV 263



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 95/213 (44%), Gaps = 9/213 (4%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           P+ +++    GI  ++V+AG  H   L  SG +
Sbjct: 181 PQLLKSLL--GIPFMQVAAGGAHSFVLTLSGAI 211


>gi|300122163|emb|CBK22737.2| unnamed protein product [Blastocystis hominis]
          Length = 355

 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/219 (27%), Positives = 101/219 (46%), Gaps = 8/219 (3%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           +  + SV++ G    G LGH  E  +     ++        V+V+    H   +   G+V
Sbjct: 118 VTEDGSVWTWGRGTFGRLGH--EVHETGIPEKVPGLDGMRFVKVACGHVHTLALTDDGRV 175

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
           F  G+N + C G  D  R    P+ +E+L+G     ++AG+  +  L+    V+T G++ 
Sbjct: 176 FAWGNNKTGCVGVSD--RGTCAPQEIESLRGKKIIDISAGMESSAALSAEHEVYTWGADN 233

Query: 245 HGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 303
           +GQLG G      + P  I  L  V  +VQIA G  +MLA++  G VY++G G      +
Sbjct: 234 YGQLGLGQGARYISQPTRIRTLRNV-PIVQIACGQYHMLALSAAGEVYAWGQGLQGQTAN 292

Query: 304 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            ++ D   P  I   +     V  ++AG  H   +D  G
Sbjct: 293 EKKVDTNIPHVIDALKES--RVKMIAAGGSHSAVVDDKG 329



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 48/187 (25%), Positives = 80/187 (42%), Gaps = 4/187 (2%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G  HTL L  +  VF+ G++  G +G     T C     I       ++ +SA  
Sbjct: 157 VKVACGHVHTLALTDDGRVFAWGNNKTGCVGVSDRGT-CAP-QEIESLRGKKIIDISAGM 214

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             +A +    +V+T G ++    G     R I +P  +  L+ VP  Q+  G      L+
Sbjct: 215 ESSAALSAEHEVYTWGADNYGQLGLGQGARYISQPTRIRTLRNVPIVQIACGQYHMLALS 274

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G V+  G    GQ  +   +D   P  I  L+E   V  IAAG S+   V   G +++
Sbjct: 275 AAGEVYAWGQGLQGQTANEKKVDTNIPHVIDALKE-SRVKMIAAGGSHSAVVDDKGRLFT 333

Query: 293 FGSGSNF 299
            G   ++
Sbjct: 334 VGEEEDW 340



 Score = 52.0 bits (123), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 82/167 (49%), Gaps = 12/167 (7%)

Query: 180 QSGQVFTCGDNSSFCCGHRDT----NRPIFRPRLVE-ALKGVPCKQVTAGLNFTGFLTIR 234
           Q G ++T G   S   GH DT    N+ +  PR VE A  G+     +        +T  
Sbjct: 64  QGGVLWTFGQGDSNQLGHGDTGDCSNQVL--PREVEDAFDGLSVVNCSICDGHMAAVTED 121

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G V T G  T G+LGH +  +   P+ +  L+ +   V++A G  + LA+T +G V+++G
Sbjct: 122 GSVWTWGRGTFGRLGH-EVHETGIPEKVPGLDGM-RFVKVACGHVHTLALTDDGRVFAWG 179

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           +    C+G  ++     P+ I++ R  G  ++ +SAG E   AL + 
Sbjct: 180 NNKTGCVGVSDR-GTCAPQEIESLR--GKKIIDISAGMESSAALSAE 223



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 56/113 (49%), Gaps = 6/113 (5%)

Query: 235 GHVHTCGSNTHGQLGHGDTLD---RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           G + T G     QLGHGDT D   +  P+ +    +  SVV  +    +M AVT +G V+
Sbjct: 66  GVLWTFGQGDSNQLGHGDTGDCSNQVLPREVEDAFDGLSVVNCSICDGHMAAVTEDGSVW 125

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           ++G G+   LGH E H+   P  +      G+  V+V+ G  H +AL   G V
Sbjct: 126 TWGRGTFGRLGH-EVHETGIPEKVPGL--DGMRFVKVACGHVHTLALTDDGRV 175


>gi|207080016|ref|NP_001128757.1| RCC1 and BTB domain-containing protein 2 isoform 2 [Pongo abelii]
 gi|55726291|emb|CAH89917.1| hypothetical protein [Pongo abelii]
          Length = 527

 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 95/218 (43%), Gaps = 4/218 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  +F  G++ CG LG G +    +   R++  +   +  +S  S  H       G+VFT
Sbjct: 40  NDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFT 98

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN  +    +   L      +V  G   +  LT  G V   G N  G
Sbjct: 99  WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 158

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T+++P P+ +    +   VV IA G    +AV   G VY +G   N  LG G  
Sbjct: 159 QVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNS 218

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            +  QP   +    +GI V RV+ G  H + L   G V
Sbjct: 219 GN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQV 254



 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 93/187 (49%), Gaps = 12/187 (6%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G YH+L L S+  VF+ G +  G +G G    Q +            VV ++  +
Sbjct: 131 IEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ 190

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
                V+ +G+V+  G N +   G  ++ N+P   P  V AL+G+  ++V  G   T  L
Sbjct: 191 MCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPT--PCRVAALQGIRVQRVACGYAHTLVL 248

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDR--PTPKSIAPLEEVGSVVQIAAGPS--YMLAVTGN 287
           T  G V+  G+N++GQLG G+  ++  PTP ++    E   +++IAA  S     A T  
Sbjct: 249 TDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTV----EKDRIIEIAACHSTHTSAAKTQG 304

Query: 288 GVVYSFG 294
           G VY +G
Sbjct: 305 GHVYMWG 311



 Score = 39.7 bits (91), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 65/145 (44%), Gaps = 6/145 (4%)

Query: 203 PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 260
           PIF     E L+ +   C   +AG N   + T+   +   G+N  G LG GD      P+
Sbjct: 8   PIFSLCSEEELQLIRQACVFGSAG-NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPR 66

Query: 261 SIAPLE-EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
            +  L  +  + +   +GP  +LA T  G V+++G  +   LG+G  +  L P  I T  
Sbjct: 67  RLDSLNGKKIACLSYGSGPHIVLATT-EGEVFTWGHNAYSQLGNGTTNHGLVPCHIST-N 124

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYV 344
                V+ V+ G  H + L S G V
Sbjct: 125 LSNKQVIEVACGSYHSLVLTSDGEV 149


>gi|310824879|ref|YP_003957237.1| regulator of chromosome condensation [Stigmatella aurantiaca
           DW4/3-1]
 gi|309397951|gb|ADO75410.1| Regulator of chromosome condensation [Stigmatella aurantiaca
           DW4/3-1]
          Length = 775

 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 76/242 (31%), Positives = 111/242 (45%), Gaps = 18/242 (7%)

Query: 107 VETSAGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV 165
           V+  +G M +   + H+L + S+++V++ G +  G LG G    + V    +  P  + V
Sbjct: 418 VQGLSGVMAVAARQEHSLAVRSDATVWAWGRNYEGQLGDGTTRRREVP---VPVPKLSSV 474

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNR--PIFRPRLVEALKGVPCKQVT 222
           V V+A   H+  V   G V+  GDN     G   +T+R  P+  P L   +       V 
Sbjct: 475 VAVAAGRYHSLAVRFDGTVWAWGDNEYGQVGDGTETSRKAPVRVPNLGGGVA------VA 528

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
           AG N +  L   G V   G N +GQLG+G T D P P  +  L      V +AAG  Y L
Sbjct: 529 AGENHSLVLRSDGTVWAWGGNHYGQLGNGITSDSPVPVQVQGLS---GGVAVAAGQYYSL 585

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           AV  +G V+++G      LG G   D   P  +Q     G   V V+AG  H + + S G
Sbjct: 586 AVRSDGTVWAWGLNFEGQLGDGTASDSPVPVRVQVPGLSGG--VAVAAGTSHALVVRSDG 643

Query: 343 YV 344
            V
Sbjct: 644 TV 645



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 89/199 (44%), Gaps = 7/199 (3%)

Query: 107 VETSAGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV 165
           V+  +G + +  G+Y++L + S+ +V++ G +  G LG G  +   V   R+  P  +  
Sbjct: 568 VQGLSGGVAVAAGQYYSLAVRSDGTVWAWGLNFEGQLGDGTASDSPVPV-RVQVPGLSGG 626

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
           V V+A  +HA  V   G V+  G N     G     R +  P  V+ L       V AG 
Sbjct: 627 VAVAAGTSHALVVRSDGTVWAWGSNYDGQVGEGAPRRRVLMPVQVQGLS--EGMAVAAGY 684

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
           N +  +   G V   G NT G LG G T  R  P     L        +AAG S+ L + 
Sbjct: 685 NHSLAVRSDGSVWAWGGNTAGVLGDGTTDRRTVPVQAQGLT---GARAVAAGESHSLVLR 741

Query: 286 GNGVVYSFGSGSNFCLGHG 304
            +G  ++ GS ++  +G G
Sbjct: 742 SDGTGWAMGSNASGQIGDG 760



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 73/239 (30%), Positives = 110/239 (46%), Gaps = 20/239 (8%)

Query: 111 AGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G + +  G  H+L L S+ +V++ GS+  G LG G   T  VS   +       VV V+
Sbjct: 170 SGGVAVAAGGLHSLALRSDGTVWAWGSNFEGQLGDG---TTNVSLVPVRVKKLTGVVAVA 226

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFT 228
           A E H+  V   G V+T G N     G   T +R +  P  V+ L G     V  G+  +
Sbjct: 227 AGEKHSLAVRSDGTVWTWGFNGYGALGDGTTSSRKV--PVQVQGLSG--GVAVAGGVYHS 282

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG--SVVQIAAGPSYMLAVTG 286
             +   G V   G+N  GQLG G     P  + + P++  G   V  +AAG S  LAV  
Sbjct: 283 LAVRSDGTVWGWGANGVGQLGDGT----PMRRVLVPVQAQGLSGVEAVAAGHSLSLAVRF 338

Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH-VVRVSAGDEHVVALDSSGYV 344
           +G V+++G  S   LG    +D ++  +    +  G+   V V A   H +A+ S G V
Sbjct: 339 DGTVWAWGGNSYGALG----NDTIETMSTVPVQVPGLSGGVTVVAASSHALAVRSDGTV 393



 Score = 64.3 bits (155), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 98/218 (44%), Gaps = 14/218 (6%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           + +V++ G +  G LG+  +T + +S   +  P  +  V V A+ +HA  V   G V+  
Sbjct: 339 DGTVWAWGGNSYGALGN--DTIETMSTVPVQVPGLSGGVTVVAASSHALAVRSDGTVWAW 396

Query: 188 GDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
           G N     G   T+ R +  P  V+ L GV    V A    +  +     V   G N  G
Sbjct: 397 GGNHYGQLGDGTTSERLVAVP--VQGLSGV--MAVAARQEHSLAVRSDATVWAWGRNYEG 452

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           QLG G T  R  P    P+ ++ SVV +AAG  + LAV  +G V+++G      +G G +
Sbjct: 453 QLGDGTTRRREVP---VPVPKLSSVVAVAAGRYHSLAVRFDGTVWAWGDNEYGQVGDGTE 509

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
                P  +          V V+AG+ H + L S G V
Sbjct: 510 TSRKAPVRVPNLGGG----VAVAAGENHSLVLRSDGTV 543



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 96/231 (41%), Gaps = 15/231 (6%)

Query: 115 QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           +I TG  H+  +  + +V++ G ++ G LG G  + + V    +     + VV V+    
Sbjct: 75  RIATGANHSWAVRPDGTVWAVGENVFGQLGDGTTSERRVP---VQVQGLSGVVAVAVGAY 131

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  +   G V+  G   + C G   T      P  V  L G     V AG   +  L  
Sbjct: 132 HSLALRSDGTVWAVG--RAACQGGDGTASDCTVPAPVPGLSG--GVAVAAGGLHSLALRS 187

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V   GSN  GQLG G T     P  +  L     VV +AAG  + LAV  +G V+++
Sbjct: 188 DGTVWAWGSNFEGQLGDGTTNVSLVPVRVKKLT---GVVAVAAGEKHSLAVRSDGTVWTW 244

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G      LG G       P  +Q         V V+ G  H +A+ S G V
Sbjct: 245 GFNGYGALGDGTTSSRKVPVQVQGLSGG----VAVAGGVYHSLAVRSDGTV 291


>gi|410208770|gb|JAA01604.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Pan troglodytes]
 gi|410264080|gb|JAA20006.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Pan troglodytes]
 gi|410293806|gb|JAA25503.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Pan troglodytes]
 gi|410338543|gb|JAA38218.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Pan troglodytes]
          Length = 555

 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 95/218 (43%), Gaps = 4/218 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  +F  G++ CG LG G +    +   R++  +   +  +S  S  H       G+VFT
Sbjct: 64  NDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFT 122

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN  +    +   L      +V  G   +  LT  G V   G N  G
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 182

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T+++P P+ +    +   VV IA G    +AV   G VY +G   N  LG G  
Sbjct: 183 QVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNS 242

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            +  QP   +    +GI V RV+ G  H + L   G V
Sbjct: 243 GN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQV 278



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 93/187 (49%), Gaps = 12/187 (6%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G YH+L L S+  VF+ G +  G +G G    Q +            VV ++  +
Sbjct: 155 IEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ 214

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
                V+ +G+V+  G N +   G  ++ N+P   P  V AL+G+  ++V  G   T  L
Sbjct: 215 MCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPT--PCRVAALQGIRVQRVACGYAHTLVL 272

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDR--PTPKSIAPLEEVGSVVQIAAGPS--YMLAVTGN 287
           T  G V+  G+N++GQLG G+  ++  PTP ++    E   +++IAA  S     A T  
Sbjct: 273 TDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTV----EKDRIIEIAACHSTHTSAAKTQG 328

Query: 288 GVVYSFG 294
           G VY +G
Sbjct: 329 GHVYMWG 335



 Score = 39.7 bits (91), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 53/116 (45%), Gaps = 3/116 (2%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE-EVGSVVQIAAGPSYMLAVTGNG 288
           + T+   +   G+N  G LG GD      P+ +  L  +  + +   +GP  +LA T  G
Sbjct: 60  YTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATT-EG 118

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            V+++G  +   LG+G  +  L P  I T       V+ V+ G  H + L S G V
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVIEVACGSYHSLVLTSDGEV 173


>gi|114630758|ref|XP_001167783.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 9
           [Pan troglodytes]
 gi|410295450|gb|JAA26325.1| hect domain and RLD 4 [Pan troglodytes]
 gi|410333083|gb|JAA35488.1| hect domain and RLD 4 [Pan troglodytes]
          Length = 1049

 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   +        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 79.0 bits (193), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 107/226 (47%), Gaps = 7/226 (3%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGV 263



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 95/213 (44%), Gaps = 9/213 (4%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           P+ +++    GI  ++V+AG  H   L  SG +
Sbjct: 181 PQLLKSLL--GIPFMQVAAGGAHSFVLTLSGAI 211


>gi|307106099|gb|EFN54346.1| hypothetical protein CHLNCDRAFT_24715 [Chlorella variabilis]
          Length = 393

 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 112/237 (47%), Gaps = 13/237 (5%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + ++ G YHTL +  S SV+S G +  G LG G +         +       VV V+A  
Sbjct: 91  VALSAGYYHTLCVGESGSVWSFGCNGKGQLGLGKDVVLVREPRLVKSLQDNKVVAVAAGM 150

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFR------PRLVEALKGVPCKQVTAGL 225
            H+  +   G+V++ G+ ++   GH   T R +F       PRLV A + +  +QV+AG 
Sbjct: 151 EHSLALTAGGEVYSWGNAANGRLGHGSATPRRLFGSSIEFLPRLVRAFEALRVEQVSAGQ 210

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
             +  ++  G     G     QLG G   D   P  + PL+  GS   +A G  + LA+ 
Sbjct: 211 MHSAAVSTAGDAFLWGYGKFHQLGFGSDEDLAGPTVLPPLK--GSTAAVACGSLHSLALQ 268

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
             G V ++G+  N  LG G +  + QP+  +  +  G+   +++AG +H  A+  SG
Sbjct: 269 YGGHVLAWGTNQNGVLGQGHEKQQ-QPK--RPSKVPGVSAEQIAAGWKHSAAVTGSG 322



 Score = 68.2 bits (165), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 70/221 (31%), Positives = 100/221 (45%), Gaps = 22/221 (9%)

Query: 135 GSSLCGVLGH----GPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
           G+  CG LGH      E    V    +  P  A    V+    H A V  SG V+T G N
Sbjct: 9   GNGDCGRLGHSLEYASEELPRVVRALLGVPLKA----VACGGAHTAAVDDSGTVYTWGLN 64

Query: 191 SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH 250
                GH   +  +  P  V   + V    ++AG   T  +   G V + G N  GQLG 
Sbjct: 65  DKGQLGHDSEDSEVGLPGEVAMPERVVA--LSAGYYHTLCVGESGSVWSFGCNGKGQLGL 122

Query: 251 G-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD- 308
           G D +    P+ +  L++   VV +AAG  + LA+T  G VYS+G+ +N  LGHG     
Sbjct: 123 GKDVVLVREPRLVKSLQD-NKVVAVAAGMEHSLALTAGGEVYSWGNAANGRLGHGSATPR 181

Query: 309 -------ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
                  E  PR ++ F  + + V +VSAG  H  A+ ++G
Sbjct: 182 RLFGSSIEFLPRLVRAF--EALRVEQVSAGQMHSAAVSTAG 220



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 68/221 (30%), Positives = 99/221 (44%), Gaps = 26/221 (11%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINF-P------SAAHV 165
           + +  G  H+L L +   V+S G++  G LGHG  T + +  + I F P       A  V
Sbjct: 144 VAVAAGMEHSLALTAGGEVYSWGNAANGRLGHGSATPRRLFGSSIEFLPRLVRAFEALRV 203

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            QVSA + H+A V  +G  F  G       G   ++  +  P ++  LKG     V  G 
Sbjct: 204 EQVSAGQMHSAAVSTAGDAFLWGYGKFHQLGF-GSDEDLAGPTVLPPLKG-STAAVACGS 261

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
             +  L   GHV   G+N +G LG G    +  PK  + +  V S  QIAAG  +  AVT
Sbjct: 262 LHSLALQYGGHVLAWGTNQNGVLGQGHE-KQQQPKRPSKVPGV-SAEQIAAGWKHSAAVT 319

Query: 286 GNGVVYSFG--------------SGSNFCLGHGEQHDELQP 312
           G+G +Y++G              +G+   LGHG   D   P
Sbjct: 320 GSGKLYTWGWGGSQGTALSFEGRTGTGGQLGHGNDFDYWSP 360



 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 54/141 (38%), Positives = 74/141 (52%), Gaps = 9/141 (6%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT--PKSIAP 264
           PR+V AL GVP K V  G   T  +   G V+T G N  GQLGH D+ D     P  +A 
Sbjct: 28  PRVVRALLGVPLKAVACGGAHTAAVDDSGTVYTWGLNDKGQLGH-DSEDSEVGLPGEVAM 86

Query: 265 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGI 323
            E    VV ++AG  + L V  +G V+SFG      LG G+    + +PR +++ +    
Sbjct: 87  PER---VVALSAGYYHTLCVGESGSVWSFGCNGKGQLGLGKDVVLVREPRLVKSLQDN-- 141

Query: 324 HVVRVSAGDEHVVALDSSGYV 344
            VV V+AG EH +AL + G V
Sbjct: 142 KVVAVAAGMEHSLALTAGGEV 162


>gi|225451993|ref|XP_002283479.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Vitis vinifera]
 gi|296087299|emb|CBI33673.3| unnamed protein product [Vitis vinifera]
          Length = 395

 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 74/282 (26%), Positives = 118/282 (41%), Gaps = 58/282 (20%)

Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  ++L I  +  +F+ G +  G LGH PET      +++   + A +VQ +    H
Sbjct: 44  VVAGSRNSLAICEDGKLFTWGWNQRGTLGHPPETKTENIPSQVKALANAKIVQAAIGGWH 103

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLV--EALKGVPCKQVTAGLNF 227
              V   G+ +  G N    CG       DT RP+ R   +       +  +QV AG   
Sbjct: 104 CLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRPLRRDITIPQRCASKLSVRQVAAGGTH 163

Query: 228 TGFLTIRGHVHT----------------------------------------------CG 241
           +  LT  GHV T                                               G
Sbjct: 164 SVVLTREGHVWTWGQPWPPGDIKQISTPVRVQGLEKVRLIAVGAFHNLALLEDGILWAWG 223

Query: 242 SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 301
           +N +GQLG GDT  R  P ++  L ++ ++V IAAG  +  A+T +G VY +G G +  L
Sbjct: 224 NNEYGQLGTGDTQPRSQPIAVQGLSDL-TLVDIAAGGWHSTALTDDGGVYGWGRGEHGRL 282

Query: 302 GHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           G G ++  ++ P+ +Q    +  ++V++S G  H VAL   G
Sbjct: 283 GFGDDKSSKMVPQKVQLLVEE--NIVQISCGGTHSVALTRDG 322



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 95/196 (48%), Gaps = 15/196 (7%)

Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGP--ETTQCVSFTRINFPSAAHVVQVSAS 171
           Q+  G  H+++++    V++ G          P  +  Q  +  R+       ++ V A 
Sbjct: 156 QVAAGGTHSVVLTREGHVWTWGQPW-------PPGDIKQISTPVRVQGLEKVRLIAVGAF 208

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
            N A  +L+ G ++  G+N     G  DT +P  +P  V+ L  +    + AG   +  L
Sbjct: 209 HNLA--LLEDGILWAWGNNEYGQLGTGDT-QPRSQPIAVQGLSDLTLVDIAAGGWHSTAL 265

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           T  G V+  G   HG+LG GD    +  P+ +  L E  ++VQI+ G ++ +A+T +G +
Sbjct: 266 TDDGGVYGWGRGEHGRLGFGDDKSSKMVPQKVQLLVEE-NIVQISCGGTHSVALTRDGRM 324

Query: 291 YSFGSGSNFCLGHGEQ 306
           +SFG G +  LG+G +
Sbjct: 325 FSFGRGDHGRLGYGRK 340



 Score = 46.2 bits (108), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 72/173 (41%), Gaps = 8/173 (4%)

Query: 129 SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
            ++ S GS   G LG G    +      +   +A +V  V A   ++  + + G++FT G
Sbjct: 6   KAIISWGSGEDGQLGIG-NNEEKEWVCAVKALAAQNVCSVVAGSRNSLAICEDGKLFTWG 64

Query: 189 DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 248
            N     GH    +    P  V+AL      Q   G      +  +G  +  G N +GQ 
Sbjct: 65  WNQRGTLGHPPETKTENIPSQVKALANAKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQC 124

Query: 249 GH----GDTLDRPTPKSIAPLEEVG---SVVQIAAGPSYMLAVTGNGVVYSFG 294
           G      D   RP  + I   +      SV Q+AAG ++ + +T  G V+++G
Sbjct: 125 GEEPERKDDTGRPLRRDITIPQRCASKLSVRQVAAGGTHSVVLTREGHVWTWG 177


>gi|313236983|emb|CBY12230.1| unnamed protein product [Oikopleura dioica]
          Length = 1048

 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 63/231 (27%), Positives = 102/231 (44%), Gaps = 19/231 (8%)

Query: 116 ITTGRYHTLLISNSSV-FSCGSSLCGVLG------HGPETTQCVSFTRINFPSAAHVVQV 168
           +  G + ++ I+ S + F  G SL G L       H P+    +            VVQV
Sbjct: 86  VAAGDFFSIAIAESGLLFGWGRSLNGELMCKQDSLHEPKLLDKIMHWS--------VVQV 137

Query: 169 SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
           +    H   + + G + + G N+    G   +      P ++ +L   P  Q+ AG   +
Sbjct: 138 ACGAQHCIALTEEGTILSWGSNTQGQLGLGSSEIEFLEPTIIASLNAFPISQICAGAYHS 197

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           G L+  G + T G N  GQLGHG++   + +P+ +  L     VV +A G  + +  T N
Sbjct: 198 GVLSPSGTLFTWGKNNWGQLGHGNSDSFQSSPRLVKTLRH-QEVVFVAMGEEHSVCRTRN 256

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           G V+S+G G N  LGH    +  QP+ I      G  V ++  G  H ++L
Sbjct: 257 GGVFSWGHGGNGQLGHNSMANVTQPKKIMELM--GTTVCQICCGRRHTISL 305



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 72/244 (29%), Positives = 115/244 (47%), Gaps = 17/244 (6%)

Query: 107 VETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV 165
           ++ +   + I +G  HT+ L S   V+SCGS+  G LG   + +QC       F  A  +
Sbjct: 27  IDANQSVISIASGLRHTVYLTSTRKVYSCGSNEFGQLGQ--QKSQCRPSLVTGF-GAEEI 83

Query: 166 VQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
             V+A +  +  + +SG +F  G   N    C        +  P+L++ +      QV  
Sbjct: 84  FHVAAGDFFSIAIAESGLLFGWGRSLNGELMCKQDS----LHEPKLLDKIMHWSVVQVAC 139

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDT-LDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
           G      LT  G + + GSNT GQLG G + ++   P  IA L     + QI AG  +  
Sbjct: 140 GAQHCIALTEEGTILSWGSNTQGQLGLGSSEIEFLEPTIIASLNAF-PISQICAGAYHSG 198

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQ--PRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            ++ +G ++++G  +   LGHG   D  Q  PR ++T R +   VV V+ G+EH V    
Sbjct: 199 VLSPSGTLFTWGKNNWGQLGHGNS-DSFQSSPRLVKTLRHQ--EVVFVAMGEEHSVCRTR 255

Query: 341 SGYV 344
           +G V
Sbjct: 256 NGGV 259



 Score = 65.1 bits (157), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 89/191 (46%), Gaps = 4/191 (2%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G  H + L    ++ S GS+  G LG G    + +  T I   +A  + Q+ A  
Sbjct: 135 VQVACGAQHCIALTEEGTILSWGSNTQGQLGLGSSEIEFLEPTIIASLNAFPISQICAGA 194

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +FT G N+    GH +++     PRLV+ L+      V  G   +   T
Sbjct: 195 YHSGVLSPSGTLFTWGKNNWGQLGHGNSDSFQSSPRLVKTLRHQEVVFVAMGEEHSVCRT 254

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLAVTGNGVVY 291
             G V + G   +GQLGH    +   PK I  +E +G+ V QI  G  + +++T    + 
Sbjct: 255 RNGGVFSWGHGGNGQLGHNSMANVTQPKKI--MELMGTTVCQICCGRRHTISLTDKRKLL 312

Query: 292 SFGSGSNFCLG 302
            FG  SN  LG
Sbjct: 313 GFGLNSNNQLG 323



 Score = 51.2 bits (121), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 55/216 (25%), Positives = 95/216 (43%), Gaps = 16/216 (7%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
           ++  G +  G LG G E       + I+  +   V+ +++   H  ++  + +V++CG N
Sbjct: 1   MYGWGKNDYGQLGLGSENMLISCPSPID--ANQSVISIASGLRHTVYLTSTRKVYSCGSN 58

Query: 191 SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG- 249
                G + +     RP LV          V AG  F+  +   G +   G + +G+L  
Sbjct: 59  EFGQLGQQKSQ---CRPSLVTGFGAEEIFHVAAGDFFSIAIAESGLLFGWGRSLNGELMC 115

Query: 250 HGDTLDRPTPKSIAPLEEV--GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 307
             D+L  P       L+++   SVVQ+A G  + +A+T  G + S+GS +   LG G   
Sbjct: 116 KQDSLHEP-----KLLDKIMHWSVVQVACGAQHCIALTEEGTILSWGSNTQGQLGLGSSE 170

Query: 308 DE-LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            E L+P  I +       + ++ AG  H   L  SG
Sbjct: 171 IEFLEPTIIASL--NAFPISQICAGAYHSGVLSPSG 204



 Score = 51.2 bits (121), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 81/167 (48%), Gaps = 20/167 (11%)

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           ++  G N     G    N  I  P  ++A + V    + +GL  T +LT    V++CGSN
Sbjct: 1   MYGWGKNDYGQLGLGSENMLISCPSPIDANQSVIS--IASGLRHTVYLTSTRKVYSCGSN 58

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 303
             GQLG   +  RP+  +    EE   +  +AAG  + +A+  +G+++ +G   N     
Sbjct: 59  EFGQLGQQKSQCRPSLVTGFGAEE---IFHVAAGDFFSIAIAESGLLFGWGRSLN----- 110

Query: 304 GE---QHDEL-QPRAIQTFRRKGIH--VVRVSAGDEHVVALDSSGYV 344
           GE   + D L +P+ +     K +H  VV+V+ G +H +AL   G +
Sbjct: 111 GELMCKQDSLHEPKLLD----KIMHWSVVQVACGAQHCIALTEEGTI 153


>gi|168052711|ref|XP_001778783.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162669789|gb|EDQ56369.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 461

 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 80/307 (26%), Positives = 134/307 (43%), Gaps = 9/307 (2%)

Query: 43  GGSHGLY-PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSV- 100
           G S  L+ PQ  ++L  L   Q+    S    ++ + ++    R N N +  L   + V 
Sbjct: 102 GNSSDLFIPQPIKALKGLEVKQIACGDSHCLAITTDGEVLGWGR-NQNGQLGLGHTEDVL 160

Query: 101 -EHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINF 159
             H     E  A  M      + T +  N  ++  G    G LG G    + V   ++  
Sbjct: 161 TPHKLTAFEGVAVKMLAAGAEHTTAVTENGKLYGWGWGRYGNLGLGDREDRLVP-DQVAA 219

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 219
            +   +  V+    H   V +SG ++T G +     GH D    +  P  V+ALK    +
Sbjct: 220 VAGELMKMVACGWRHTICVAESGNMYTFGWSKYGQLGHGDFADHLI-PHQVQALKSKKIQ 278

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE-VGSVVQIAAGP 278
            +T G   T  L   G ++  G N  GQ+G G+T D+ +P+ +  L++ V +VVQ   G 
Sbjct: 279 AITGGWRHTFALDSDGRLYGWGWNKFGQVGCGNTEDQSSPQLVKGLQDQVVTVVQ--CGW 336

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            + LA+T  G VYS+G G++  LGHG+  D   P+ I+     G    ++ +        
Sbjct: 337 RHTLAMTDRGNVYSWGRGTSGQLGHGDTVDRSTPKRIEILSSDGFACEQIESSGSSNCTS 396

Query: 339 DSSGYVS 345
            +S ++S
Sbjct: 397 KTSNWIS 403



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 69/231 (29%), Positives = 110/231 (47%), Gaps = 7/231 (3%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + ++ G  H++ L+S   V S G    G LGHG    +    T ++      +  V+   
Sbjct: 17  LALSAGASHSVALLSGDLVCSWGRGEDGQLGHGDAEERHFP-TIVSALDDCEISSVTCGA 75

Query: 173 NHAAFVLQSGQ-VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           +H   +  S + V++ G       GH +++  +F P+ ++ALKG+  KQ+  G +    +
Sbjct: 76  DHTTALSNSTKTVYSWGWGDFGRLGHGNSS-DLFIPQPIKALKGLEVKQIACGDSHCLAI 134

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           T  G V   G N +GQLG G T D  TP  +   E V +V  +AAG  +  AVT NG +Y
Sbjct: 135 TTDGEVLGWGRNQNGQLGLGHTEDVLTPHKLTAFEGV-AVKMLAAGAEHTTAVTENGKLY 193

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            +G G    LG G++ D L P  +      G  +  V+ G  H + +  SG
Sbjct: 194 GWGWGRYGNLGLGDREDRLVPDQVAAV--AGELMKMVACGWRHTICVAESG 242


>gi|332841362|ref|XP_003314204.1| PREDICTED: RCC1 and BTB domain-containing protein 2, partial [Pan
           troglodytes]
          Length = 552

 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 95/218 (43%), Gaps = 4/218 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  +F  G++ CG LG G +    +   R++  +   +  +S  S  H       G+VFT
Sbjct: 67  NDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFT 125

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN  +    +   L      +V  G   +  LT  G V   G N  G
Sbjct: 126 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 185

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T+++P P+ +    +   VV IA G    +AV   G VY +G   N  LG G  
Sbjct: 186 QVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNS 245

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            +  QP   +    +GI V RV+ G  H + L   G V
Sbjct: 246 GN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQV 281



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 93/187 (49%), Gaps = 12/187 (6%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G YH+L L S+  VF+ G +  G +G G    Q +            VV ++  +
Sbjct: 158 IEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ 217

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
                V+ +G+V+  G N +   G  ++ N+P   P  V AL+G+  ++V  G   T  L
Sbjct: 218 MCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPT--PCRVAALQGIRVQRVACGYAHTLVL 275

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDR--PTPKSIAPLEEVGSVVQIAAGPS--YMLAVTGN 287
           T  G V+  G+N++GQLG G+  ++  PTP ++    E   +++IAA  S     A T  
Sbjct: 276 TDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTV----EKDRIIEIAACHSTHTSAAKTQG 331

Query: 288 GVVYSFG 294
           G VY +G
Sbjct: 332 GHVYMWG 338



 Score = 39.3 bits (90), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 53/116 (45%), Gaps = 3/116 (2%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE-EVGSVVQIAAGPSYMLAVTGNG 288
           + T+   +   G+N  G LG GD      P+ +  L  +  + +   +GP  +LA T  G
Sbjct: 63  YTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATT-EG 121

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            V+++G  +   LG+G  +  L P  I T       V+ V+ G  H + L S G V
Sbjct: 122 EVFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVIEVACGSYHSLVLTSDGEV 176


>gi|326671858|ref|XP_685964.5| PREDICTED: hypothetical protein LOC557752 [Danio rerio]
          Length = 1413

 Score = 79.3 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 55/180 (30%), Positives = 89/180 (49%), Gaps = 7/180 (3%)

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
           +++S  + H A V ++G++F  G N+    G   T   + +P  V+ALK    K    G 
Sbjct: 39  LRISCGDEHTALVTENGKLFMFGSNNWGQLG-LGTKTTVNKPTCVKALKSERVKLTACGR 97

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
             T   T RG+++ CG N  GQLG GD  DR +   +    + G +  +AAG +   A+T
Sbjct: 98  THTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQGPIKMLAAGSNTSAALT 157

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH--VVALDSSGY 343
            +G +Y +G  S   +G G++ + L P+ +   +R    V  VS G  H   V +D + Y
Sbjct: 158 QDGRLYMWGDNSEGQIGLGKESNALTPQEVSVGKR----VFWVSCGYYHSAFVTVDGALY 213



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 68/230 (29%), Positives = 114/230 (49%), Gaps = 16/230 (6%)

Query: 119 GRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAA 176
           GR HTL+  S  ++++CG +  G LG G +     SF  + F +    ++ ++A  N +A
Sbjct: 96  GRTHTLVFTSRGNLYACGGNNEGQLGLG-DCNDRTSFHLVEFFNKQGPIKMLAAGSNTSA 154

Query: 177 FVLQSGQVFTCGDNSSFCCG-HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 235
            + Q G+++  GDNS    G  +++N     P+ V   K V    V+ G   + F+T+ G
Sbjct: 155 ALTQDGRLYMWGDNSEGQIGLGKESN--ALTPQEVSVGKRV--FWVSCGYYHSAFVTVDG 210

Query: 236 HVHTCGSNTHGQLGHG--DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            ++T G    G+LG       +   P+ +  + +   VVQ+A G  + +A+T N  VYSF
Sbjct: 211 ALYTFGEKDSGKLGLSTEKLANHKVPQQVTDIPD--RVVQVACGGGHTVALTENE-VYSF 267

Query: 294 GSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           G G    LGHG    E + PR ++ FR+    V   + G+ H   +  +G
Sbjct: 268 GLGQFGQLGHGTFIFESRLPRVVEHFRKG--RVKHAACGENHTALITDNG 315



 Score = 67.4 bits (163), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 68/237 (28%), Positives = 108/237 (45%), Gaps = 28/237 (11%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ----- 167
           ++I+ G  HT L++ N  +F  GS+  G LG G +TT       +N P+    ++     
Sbjct: 39  LRISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTT-------VNKPTCVKALKSERVK 91

Query: 168 -VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEAL-KGVPCKQVTAG 224
             +    H       G ++ CG N+    G  D N R  F   LVE   K  P K + AG
Sbjct: 92  LTACGRTHTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSF--HLVEFFNKQGPIKMLAAG 149

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA 283
            N +  LT  G ++  G N+ GQ+G G   +  TP+ ++    VG  V  ++ G  +   
Sbjct: 150 SNTSAALTQDGRLYMWGDNSEGQIGLGKESNALTPQEVS----VGKRVFWVSCGYYHSAF 205

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           VT +G +Y+FG   +  LG   +   +   P+ +     +   VV+V+ G  H VAL
Sbjct: 206 VTVDGALYTFGEKDSGKLGLSTEKLANHKVPQQVTDIPDR---VVQVACGGGHTVAL 259



 Score = 57.8 bits (138), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 58/217 (26%), Positives = 96/217 (44%), Gaps = 10/217 (4%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L  +  ++  G +  G +G G E+    + T         V  VS    H+AFV   G +
Sbjct: 156 LTQDGRLYMWGDNSEGQIGLGKESN---ALTPQEVSVGKRVFWVSCGYYHSAFVTVDGAL 212

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK--QVTAGLNFTGFLTIRGHVHTCGS 242
           +T G+  S   G   +   +   ++ + +  +P +  QV  G   T  LT    V++ G 
Sbjct: 213 YTFGEKDSGKLGL--STEKLANHKVPQQVTDIPDRVVQVACGGGHTVALT-ENEVYSFGL 269

Query: 243 NTHGQLGHGD-TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 301
              GQLGHG    +   P+ +    + G V   A G ++   +T NG++Y+FG G +  L
Sbjct: 270 GQFGQLGHGTFIFESRLPRVVEHFRK-GRVKHAACGENHTALITDNGLLYTFGDGRHGKL 328

Query: 302 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           G GE++   Q +     R    HV  V+ G  H++ L
Sbjct: 329 GLGEENFTNQFKPTLCPRFLDYHVHSVTCGGCHMLVL 365



 Score = 38.5 bits (88), Expect = 4.9,   Method: Composition-based stats.
 Identities = 26/103 (25%), Positives = 44/103 (42%), Gaps = 5/103 (4%)

Query: 114 MQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           +Q+  G  HT+ ++ + V+S G    G LGHG    +      +       V   +  EN
Sbjct: 247 VQVACGGGHTVALTENEVYSFGLGQFGQLGHGTFIFESRLPRVVEHFRKGRVKHAACGEN 306

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTN-----RPIFRPRLVE 211
           H A +  +G ++T GD      G  + N     +P   PR ++
Sbjct: 307 HTALITDNGLLYTFGDGRHGKLGLGEENFTNQFKPTLCPRFLD 349


>gi|428178444|gb|EKX47319.1| hypothetical protein GUITHDRAFT_42892, partial [Guillardia theta
           CCMP2712]
          Length = 240

 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 64/232 (27%), Positives = 107/232 (46%), Gaps = 17/232 (7%)

Query: 119 GRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRI-NFPSAAH-----VVQVSAS 171
           G YH  L+S    V++ G++  G LG          ++R+ + PS  H     VV  S  
Sbjct: 1   GPYHAALVSGLGDVYTWGANFFGQLGR--------DYSRLWSLPSELHLPNVFVVSASCG 52

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   + + G+VF+ GD ++   GH +  R    P+ + +L+      + AG   +  +
Sbjct: 53  GMHTLLLSKEGKVFSFGDGANGRLGHGNC-RNYSLPQPIASLESKRITFIAAGWTHSMAI 111

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT-GNGVV 290
              G + T G    G+LGHG+ LD   P+ +  L  +     +A+G     AV   NG V
Sbjct: 112 DDDGKLFTWGCGNAGRLGHGNVLDVWRPRFVDRLYRIRMKAMMASGSYDHSAVCCENGTV 171

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           +++G G +  LG G     L+P  +++     +H+V VS G  H  A+ + G
Sbjct: 172 WTWGLGEHGQLGVGSTESHLEPVLVKSMADANLHIVEVSCGGAHTAAVTNDG 223



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/211 (28%), Positives = 95/211 (45%), Gaps = 27/211 (12%)

Query: 106 IVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRI 157
           +V  S G M       HTLL+S    VFS G    G LGHG       P+    +   RI
Sbjct: 46  VVSASCGGM-------HTLLLSKEGKVFSFGDGANGRLGHGNCRNYSLPQPIASLESKRI 98

Query: 158 NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVP 217
            F        ++A   H+  +   G++FT G  ++   GH +    ++RPR V+ L  + 
Sbjct: 99  TF--------IAAGWTHSMAIDDDGKLFTWGCGNAGRLGHGNV-LDVWRPRFVDRLYRIR 149

Query: 218 CKQVTAGLNF--TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQI 274
            K + A  ++  +      G V T G   HGQLG G T     P  +  + +    +V++
Sbjct: 150 MKAMMASGSYDHSAVCCENGTVWTWGLGEHGQLGVGSTESHLEPVLVKSMADANLHIVEV 209

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
           + G ++  AVT +G + ++G G    LGHG 
Sbjct: 210 SCGGAHTAAVTNDGTLLTWGRGDWGQLGHGN 240


>gi|426364914|ref|XP_004049536.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Gorilla gorilla gorilla]
          Length = 979

 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 107/226 (47%), Gaps = 7/226 (3%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGV 263



 Score = 78.6 bits (192), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   +        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V +IA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 95/213 (44%), Gaps = 9/213 (4%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     +  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           P+ +++    GI  ++V+AG  H   L  SG +
Sbjct: 181 PQLLKSLL--GIPFMQVAAGGAHSFVLTLSGAI 211


>gi|350418736|ref|XP_003491950.1| PREDICTED: hypothetical protein LOC100748540 [Bombus impatiens]
          Length = 791

 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 71/243 (29%), Positives = 112/243 (46%), Gaps = 26/243 (10%)

Query: 119 GRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSF--TRINFP--------SAAHVVQ 167
           GR HTL+ + S  +F+CGS   G LG G      +S     +N P        S + +VQ
Sbjct: 96  GRAHTLICTGSQKIFACGSDQEGQLGRG------ISAIGDSVNTPVLVYDSGLSGSKIVQ 149

Query: 168 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
           ++A  +H+  +   G VF  G N     G  D +  + +P  V   +  P KQ++AG   
Sbjct: 150 IAAGSHHSLALTSDGGVFAWGSNLEGQLGLPDVSGLVNKPTKVHIPE--PVKQISAGYYH 207

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP--LEEVGSVVQIAAGPSYMLAVT 285
           + FLT  G V+ CG +  G+LG    +D      +AP  ++     V +A G  + + + 
Sbjct: 208 STFLTESGLVYVCGESESGKLG----IDASFSTQVAPKQMQLPSPAVHVACGGHHTVILA 263

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            NG +Y  GS S+  LG G    EL  P+ +     +   + R+S G+ H   +  SG +
Sbjct: 264 ENGNLYCTGSNSSGQLGLGTNLSELHIPKLLPRGMLRNETITRISCGESHTAVVTESGKL 323

Query: 345 SLC 347
             C
Sbjct: 324 YTC 326



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 67/223 (30%), Positives = 101/223 (45%), Gaps = 33/223 (14%)

Query: 146 PETTQCVSFTRINFPS--AAH-------VVQVSASENHAAFVLQSGQVFTCGDNS--SFC 194
           PET    +  R  F    A+H       V+ ++  + H+A + Q+G++F  G N      
Sbjct: 10  PETGAVFTIGRSRFADNVASHFFIRRDPVLSITCGDEHSAVICQTGRLFVFGSNDWGQLG 69

Query: 195 CGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH---- 250
            GH++    I +P  V+ALK      V  G   T   T    +  CGS+  GQLG     
Sbjct: 70  LGHKNH---ISKPSCVKALKPERVTHVACGRAHTLICTGSQKIFACGSDQEGQLGRGISA 126

Query: 251 -GDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD 308
            GD+++ P     + L   GS +VQIAAG  + LA+T +G V+++GS     LG      
Sbjct: 127 IGDSVNTPVLVYDSGL--SGSKIVQIAAGSHHSLALTSDGGVFAWGSNLEGQLG------ 178

Query: 309 ELQPRAIQTFRRKGIH----VVRVSAGDEHVVALDSSGYVSLC 347
            L   +    +   +H    V ++SAG  H   L  SG V +C
Sbjct: 179 -LPDVSGLVNKPTKVHIPEPVKQISAGYYHSTFLTESGLVYVC 220



 Score = 54.7 bits (130), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 68/138 (49%), Gaps = 5/138 (3%)

Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI+ G YH+  ++ S  V+ CG S  G LG     +  V+  ++  PS A  V V+   +
Sbjct: 200 QISAGYYHSTFLTESGLVYVCGESESGKLGIDASFSTQVAPKQMQLPSPA--VHVACGGH 257

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE--ALKGVPCKQVTAGLNFTGFL 231
           H   + ++G ++  G NSS   G       +  P+L+    L+     +++ G + T  +
Sbjct: 258 HTVILAENGNLYCTGSNSSGQLGLGTNLSELHIPKLLPRGMLRNETITRISCGESHTAVV 317

Query: 232 TIRGHVHTCGSNTHGQLG 249
           T  G ++TCG   HG+LG
Sbjct: 318 TESGKLYTCGDGRHGKLG 335


>gi|218782845|ref|YP_002434163.1| chromosome condensation regulator RCC1 [Desulfatibacillum
           alkenivorans AK-01]
 gi|218764229|gb|ACL06695.1| regulator of chromosome condensation RCC1 [Desulfatibacillum
           alkenivorans AK-01]
          Length = 437

 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 61/179 (34%), Positives = 85/179 (47%), Gaps = 12/179 (6%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK---QVTAGLNFTGF 230
           H+  V   G V+  GDNSS   G   TN+    P  V    G P     +V AG   +  
Sbjct: 66  HSLVVKNDGTVWAWGDNSSGQLG-IGTNKASLSPVRVMHKSGAPLNGVLKVAAGERHSLA 124

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA-----PLEEVGSVVQIAAGPSYMLAVT 285
           LT +G V T G N+ GQLG G   +R +P  +      PLE   ++V  A G  + LAV 
Sbjct: 125 LTAKGEVWTWGDNSKGQLGDGFFYERRSPVKVRHIRTNPLE---NIVGAACGGKHSLAVA 181

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            +G V+++GS S+  +G G   +   PR +  F +    V  V+AG  H +AL   G V
Sbjct: 182 SDGTVWAWGSNSDGQIGDGTLKNRQNPRQVMRFGKPLAGVKAVAAGFAHSLALSVDGTV 240



 Score = 74.3 bits (181), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 67/239 (28%), Positives = 113/239 (47%), Gaps = 19/239 (7%)

Query: 119 GRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH---VVQVSASENH 174
           G YH+L++ N  +V++ G +  G LG G      +S  R+   S A    V++V+A E H
Sbjct: 63  GGYHSLVVKNDGTVWAWGDNSSGQLGIG-TNKASLSPVRVMHKSGAPLNGVLKVAAGERH 121

Query: 175 AAFVLQSGQVFTCGDNSSFCCGH---RDTNRPI----FRPRLVEALKGVPCKQVTAGLNF 227
           +  +   G+V+T GDNS    G     +   P+     R   +E + G  C     G   
Sbjct: 122 SLALTAKGEVWTWGDNSKGQLGDGFFYERRSPVKVRHIRTNPLENIVGAAC-----GGKH 176

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL-EEVGSVVQIAAGPSYMLAVTG 286
           +  +   G V   GSN+ GQ+G G   +R  P+ +    + +  V  +AAG ++ LA++ 
Sbjct: 177 SLAVASDGTVWAWGSNSDGQIGDGTLKNRQNPRQVMRFGKPLAGVKAVAAGFAHSLALSV 236

Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQP-RAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           +G V+++G      LG    +D   P + + +  R   +VV ++AG    +AL   G V
Sbjct: 237 DGTVWAWGDNEFGQLGDCSDYDRKAPVQVMHSVDRPLDNVVAIAAGRAFSLALTRDGEV 295



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 68/238 (28%), Positives = 101/238 (42%), Gaps = 38/238 (15%)

Query: 82  LLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLIS-NSSVFSCGSSLCG 140
           L NR N   ++V+RF + +          AG   +  G  H+L +S + +V++ G +  G
Sbjct: 202 LKNRQNP--RQVMRFGKPL----------AGVKAVAAGFAHSLALSVDGTVWAWGDNEFG 249

Query: 141 VLGHGPETTQCVSFTRINFPSAAH--------VVQVSASENHAAFVLQSGQVFTCGDNSS 192
            LG       C  + R       H        VV ++A    +  + + G+V+  G+N  
Sbjct: 250 QLG------DCSDYDRKAPVQVMHSVDRPLDNVVAIAAGRAFSLALTRDGEVWAWGNNGV 303

Query: 193 FCCGHRDTNRPIFRPRLVEALKGVPCKQV---TAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
              G    N  +  P  V A  GVP K V   TA    +  L   G V   G+   GQLG
Sbjct: 304 GQLGMGPHNGFVRDPLPVRAANGVPLKGVRAITANGRHSLALMNDGSVLAWGAGDRGQLG 363

Query: 250 HG--DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
            G  +  D PT      L  + SV+ +AAG  + LAV  NG V ++G      LG G+
Sbjct: 364 QGAQNHEDHPT------LASLHSVICLAAGRYHSLAVAENGAVLAWGDNQKGQLGIGK 415



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 66/236 (27%), Positives = 102/236 (43%), Gaps = 19/236 (8%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA-AHVVQVSASENHAAF 177
           G++   + S+ +V++ GS+  G +G G    +      + F    A V  V+A   H+  
Sbjct: 174 GKHSLAVASDGTVWAWGSNSDGQIGDGTLKNRQNPRQVMRFGKPLAGVKAVAAGFAHSLA 233

Query: 178 VLQSGQVFTCGDNSSFC----CGHRDTNRPIFRPRLVE-ALKGVPCKQVTAGLNFTGFLT 232
           +   G V+  GDN  F     C   D   P+     V+  L  V    + AG  F+  LT
Sbjct: 234 LSVDGTVWAWGDNE-FGQLGDCSDYDRKAPVQVMHSVDRPLDNVVA--IAAGRAFSLALT 290

Query: 233 IRGHVHTCGSNTHGQLG---HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             G V   G+N  GQLG   H   +  P P   A    +  V  I A   + LA+  +G 
Sbjct: 291 RDGEVWAWGNNGVGQLGMGPHNGFVRDPLPVRAANGVPLKGVRAITANGRHSLALMNDGS 350

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH-VVRVSAGDEHVVALDSSGYV 344
           V ++G+G    LG G Q+ E  P          +H V+ ++AG  H +A+  +G V
Sbjct: 351 VLAWGAGDRGQLGQGAQNHEDHPTLAS------LHSVICLAAGRYHSLAVAENGAV 400


>gi|383865068|ref|XP_003707997.1| PREDICTED: LOW QUALITY PROTEIN: regulator of chromosome
           condensation-like [Megachile rotundata]
          Length = 469

 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 111/245 (45%), Gaps = 21/245 (8%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLG------------HGPETTQCVSFTRINFP 160
           ++I +G  H +L++ N  V++CG    G LG            HG       +       
Sbjct: 220 VKIASGADHLVLLNENGHVYTCGCGEQGQLGRVAARAASRNTRHGIGPLLIPALVEFKVT 279

Query: 161 SAAHVVQVSASENHAAFV--LQSGQVFTCGDNSSFCCGHRDTNRPI--FRPRLVEALKGV 216
                  + A  ++  F    Q G ++  G N+ +  G +D   P+  F P++ +   G 
Sbjct: 280 KKLEFTDIWAG-SYCTFAKEYQKGDIYAFGLNNYYQIGLKD---PVTQFHPQISKTFSGK 335

Query: 217 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
             K +++G + T  L   G V   G   +G+LG G         ++ P       V +AA
Sbjct: 336 VWKHISSGQHHTIALDDSGQVFVMGRKEYGRLGLGPNCSDAKELTLVPALSSFKCVDVAA 395

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
           G +   AVT +G +YS+G GSN  LG GE+ D  +P  ++  + +G  +VRV+ G +H +
Sbjct: 396 GSAQSFAVTESGDLYSWGMGSNGQLGTGEEEDVEEPVLVKGKQLEGKTIVRVAGGGQHTL 455

Query: 337 ALDSS 341
           AL ++
Sbjct: 456 ALATT 460



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 74/259 (28%), Positives = 112/259 (43%), Gaps = 35/259 (13%)

Query: 105 DIVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR---INFP 160
           D+V  +AG M       H + I  +  V + G +  G LG   +T++  S T    ++ P
Sbjct: 114 DVVAVAAGGM-------HNVCIRKTGEVLTFGCNDEGALGR--DTSKDGSETEPGPVDLP 164

Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRL-VEALKGVPC 218
             A  VQV+A ++H+A +L+ G+VF  G   SF   H      +    R  +E L  V  
Sbjct: 165 GKA--VQVTAGDSHSAALLEDGRVFAWG---SFRDSHGSMGLTLKGNERFPIEILPNVKI 219

Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH--GDTLDRPTPKSIAPL----------E 266
            ++ +G +    L   GHV+TCG    GQLG        R T   I PL           
Sbjct: 220 VKIASGADHLVLLNENGHVYTCGCGEQGQLGRVAARAASRNTRHGIGPLLIPALVEFKVT 279

Query: 267 EVGSVVQIAAGPSYMLAVT-GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
           +      I AG     A     G +Y+FG  + + +G  +   +  P+  +TF   G   
Sbjct: 280 KKLEFTDIWAGSYCTFAKEYQKGDIYAFGLNNYYQIGLKDPVTQFHPQISKTF--SGKVW 337

Query: 326 VRVSAGDEHVVALDSSGYV 344
             +S+G  H +ALD SG V
Sbjct: 338 KHISSGQHHTIALDDSGQV 356



 Score = 47.4 bits (111), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 60/115 (52%), Gaps = 7/115 (6%)

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G V T G N  G LG  DT    +     P++  G  VQ+ AG S+  A+  +G V+++G
Sbjct: 132 GEVLTFGCNDEGALGR-DTSKDGSETEPGPVDLPGKAVQVTAGDSHSAALLEDGRVFAWG 190

Query: 295 S--GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSLC 347
           S   S+  +G   + +E  P  I       + +V++++G +H+V L+ +G+V  C
Sbjct: 191 SFRDSHGSMGLTLKGNERFPIEILP----NVKIVKIASGADHLVLLNENGHVYTC 241


>gi|115374764|ref|ZP_01462040.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
 gi|115368241|gb|EAU67200.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
          Length = 750

 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 76/242 (31%), Positives = 111/242 (45%), Gaps = 18/242 (7%)

Query: 107 VETSAGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV 165
           V+  +G M +   + H+L + S+++V++ G +  G LG G    + V    +  P  + V
Sbjct: 393 VQGLSGVMAVAARQEHSLAVRSDATVWAWGRNYEGQLGDGTTRRREVP---VPVPKLSSV 449

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNR--PIFRPRLVEALKGVPCKQVT 222
           V V+A   H+  V   G V+  GDN     G   +T+R  P+  P L   +       V 
Sbjct: 450 VAVAAGRYHSLAVRFDGTVWAWGDNEYGQVGDGTETSRKAPVRVPNLGGGVA------VA 503

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
           AG N +  L   G V   G N +GQLG+G T D P P  +  L      V +AAG  Y L
Sbjct: 504 AGENHSLVLRSDGTVWAWGGNHYGQLGNGITSDSPVPVQVQGLS---GGVAVAAGQYYSL 560

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           AV  +G V+++G      LG G   D   P  +Q     G   V V+AG  H + + S G
Sbjct: 561 AVRSDGTVWAWGLNFEGQLGDGTASDSPVPVRVQVPGLSGG--VAVAAGTSHALVVRSDG 618

Query: 343 YV 344
            V
Sbjct: 619 TV 620



 Score = 68.9 bits (167), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 89/199 (44%), Gaps = 7/199 (3%)

Query: 107 VETSAGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV 165
           V+  +G + +  G+Y++L + S+ +V++ G +  G LG G  +   V   R+  P  +  
Sbjct: 543 VQGLSGGVAVAAGQYYSLAVRSDGTVWAWGLNFEGQLGDGTASDSPVPV-RVQVPGLSGG 601

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
           V V+A  +HA  V   G V+  G N     G     R +  P  V+ L       V AG 
Sbjct: 602 VAVAAGTSHALVVRSDGTVWAWGSNYDGQVGEGAPRRRVLMPVQVQGLS--EGMAVAAGY 659

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
           N +  +   G V   G NT G LG G T  R  P     L        +AAG S+ L + 
Sbjct: 660 NHSLAVRSDGSVWAWGGNTAGVLGDGTTDRRTVPVQAQGLT---GARAVAAGESHSLVLR 716

Query: 286 GNGVVYSFGSGSNFCLGHG 304
            +G  ++ GS ++  +G G
Sbjct: 717 SDGTGWAMGSNASGQIGDG 735



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 73/239 (30%), Positives = 110/239 (46%), Gaps = 20/239 (8%)

Query: 111 AGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G + +  G  H+L L S+ +V++ GS+  G LG G   T  VS   +       VV V+
Sbjct: 145 SGGVAVAAGGLHSLALRSDGTVWAWGSNFEGQLGDG---TTNVSLVPVRVKKLTGVVAVA 201

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFT 228
           A E H+  V   G V+T G N     G   T +R +  P  V+ L G     V  G+  +
Sbjct: 202 AGEKHSLAVRSDGTVWTWGFNGYGALGDGTTSSRKV--PVQVQGLSG--GVAVAGGVYHS 257

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG--SVVQIAAGPSYMLAVTG 286
             +   G V   G+N  GQLG G     P  + + P++  G   V  +AAG S  LAV  
Sbjct: 258 LAVRSDGTVWGWGANGVGQLGDGT----PMRRVLVPVQAQGLSGVEAVAAGHSLSLAVRF 313

Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH-VVRVSAGDEHVVALDSSGYV 344
           +G V+++G  S   LG    +D ++  +    +  G+   V V A   H +A+ S G V
Sbjct: 314 DGTVWAWGGNSYGALG----NDTIETMSTVPVQVPGLSGGVTVVAASSHALAVRSDGTV 368



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 98/218 (44%), Gaps = 14/218 (6%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           + +V++ G +  G LG+  +T + +S   +  P  +  V V A+ +HA  V   G V+  
Sbjct: 314 DGTVWAWGGNSYGALGN--DTIETMSTVPVQVPGLSGGVTVVAASSHALAVRSDGTVWAW 371

Query: 188 GDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
           G N     G   T+ R +  P  V+ L GV    V A    +  +     V   G N  G
Sbjct: 372 GGNHYGQLGDGTTSERLVAVP--VQGLSGV--MAVAARQEHSLAVRSDATVWAWGRNYEG 427

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           QLG G T  R  P    P+ ++ SVV +AAG  + LAV  +G V+++G      +G G +
Sbjct: 428 QLGDGTTRRREVP---VPVPKLSSVVAVAAGRYHSLAVRFDGTVWAWGDNEYGQVGDGTE 484

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
                P  +          V V+AG+ H + L S G V
Sbjct: 485 TSRKAPVRVPNLGGG----VAVAAGENHSLVLRSDGTV 518



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 96/231 (41%), Gaps = 15/231 (6%)

Query: 115 QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           +I TG  H+  +  + +V++ G ++ G LG G  + + V    +     + VV V+    
Sbjct: 50  RIATGANHSWAVRPDGTVWAVGENVFGQLGDGTTSERRVP---VQVQGLSGVVAVAVGAY 106

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  +   G V+  G   + C G   T      P  V  L G     V AG   +  L  
Sbjct: 107 HSLALRSDGTVWAVG--RAACQGGDGTASDCTVPAPVPGLSG--GVAVAAGGLHSLALRS 162

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V   GSN  GQLG G T     P  +  L     VV +AAG  + LAV  +G V+++
Sbjct: 163 DGTVWAWGSNFEGQLGDGTTNVSLVPVRVKKLT---GVVAVAAGEKHSLAVRSDGTVWTW 219

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G      LG G       P  +Q         V V+ G  H +A+ S G V
Sbjct: 220 GFNGYGALGDGTTSSRKVPVQVQGLSGG----VAVAGGVYHSLAVRSDGTV 266


>gi|432104195|gb|ELK31017.1| RCC1 and BTB domain-containing protein 2 [Myotis davidii]
          Length = 526

 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 95/218 (43%), Gaps = 5/218 (2%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  VF  G++ CG LG G +    +   R++  S   +  +S  S  H       G+VFT
Sbjct: 40  NDEVFVLGTNCCGCLGLG-DVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFT 98

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN  +    +   L      +V  G   +  LT  G V   G N  G
Sbjct: 99  WGHNAYSQLGNGTTNHGLVPCHISTNLSNKHVIEVACGSYHSLVLTSDGEVFAWGYNNSG 158

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T ++P P+ +    +   VV IA G    +AV  NG VY +G   N  LG G  
Sbjct: 159 QVGSGSTANQPIPRRVTSSLQNKVVVNIACGQMCSMAVVDNGEVYVWGYNGNGQLGLGSS 218

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            ++  P  +     +G+ V RV+ G  H + L   G V
Sbjct: 219 GNQSTPCRLAL---QGVRVQRVACGYAHTLVLTDEGQV 253



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 89/184 (48%), Gaps = 7/184 (3%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G YH+L L S+  VF+ G +  G +G G    Q +     +      VV ++  +
Sbjct: 131 IEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTSSLQNKVVVNIACGQ 190

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             +  V+ +G+V+  G N +   G   +       RL  AL+GV  ++V  G   T  LT
Sbjct: 191 MCSMAVVDNGEVYVWGYNGNGQLGLGSSGNQSTPCRL--ALQGVRVQRVACGYAHTLVLT 248

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS--YMLAVTGNGVV 290
             G V+  G+N++GQLG G+  ++  P  +  + E   +++IAA  S     A T  G V
Sbjct: 249 DEGQVYAWGANSYGQLGTGNKSNQSYPTPV--VVEKDRIIEIAACHSAHTSAAKTQGGHV 306

Query: 291 YSFG 294
           Y +G
Sbjct: 307 YMWG 310



 Score = 42.7 bits (99), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 66/145 (45%), Gaps = 6/145 (4%)

Query: 203 PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 260
           PIF     E L+ +   C   +AG N   + T+   V   G+N  G LG GD      P+
Sbjct: 8   PIFSLCSEEELQLIRQACVFGSAG-NEVLYTTVNDEVFVLGTNCCGCLGLGDVQSTIEPR 66

Query: 261 SIAPLE-EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
            +  L  +  + +   +GP  +LA T  G V+++G  +   LG+G  +  L P  I T  
Sbjct: 67  RLDSLSGKKIACLSYGSGPHIVLATT-EGEVFTWGHNAYSQLGNGTTNHGLVPCHIST-N 124

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYV 344
               HV+ V+ G  H + L S G V
Sbjct: 125 LSNKHVIEVACGSYHSLVLTSDGEV 149


>gi|313236433|emb|CBY11750.1| unnamed protein product [Oikopleura dioica]
          Length = 2239

 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 76/240 (31%), Positives = 110/240 (45%), Gaps = 11/240 (4%)

Query: 113  NMQ-ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVS--FTRINFPSAAHVVQV 168
            NMQ I  G   T L S S +V S G    G LGHG      V    + +      H+   
Sbjct: 1417 NMQTIELGLNCTFLCSASGAVTSTGEGSYGRLGHGNSDDLSVPSLVSALQGFIVTHLSSS 1476

Query: 169  SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
              S+ H   + +SG++FT GD      GH ++ R   RPRLVE L G        G   T
Sbjct: 1477 VGSDGHTLAITESGELFTWGDGDYGKLGHGNSERQ-RRPRLVETLVGETVVDGCCGYKHT 1535

Query: 229  GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
              +T  G+++T G   +G+LGHG+T  + TP  +   + + SV   + G ++ LA++ +G
Sbjct: 1536 AVVTATGYLYTFGYGDYGRLGHGNTTSKKTPTLVHDCQNIASV---SCGLNHTLALSRDG 1592

Query: 289  V-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSLC 347
            + V++FG G    LG G       P  I      GI    V  G +  V L  +G V +C
Sbjct: 1593 MTVWAFGDGDFGKLGLGNTLAVQSPNKIAALENVGIK--SVHCGHQWSVFLAINGDVYVC 1650



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 107/244 (43%), Gaps = 26/244 (10%)

Query: 106  IVETSAGNMQIT--TGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSA 162
            +VET  G   +    G  HT +++ +  +++ G    G LGHG  T++         P+ 
Sbjct: 1516 LVETLVGETVVDGCCGYKHTAVVTATGYLYTFGYGDYGRLGHGNTTSKKT-------PTL 1568

Query: 163  AH----VVQVSASENHAAFVLQSGQ-VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVP 217
             H    +  VS   NH   + + G  V+  GD      G  +T   +  P  + AL+ V 
Sbjct: 1569 VHDCQNIASVSCGLNHTLALSRDGMTVWAFGDGDFGKLGLGNT-LAVQSPNKIAALENVG 1627

Query: 218  CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAA 276
             K V  G  ++ FL I G V+ CG +    +G       PT      LE +   V QI+ 
Sbjct: 1628 IKSVHCGHQWSVFLAINGDVYVCGQDAFNGIGGPGQTVIPT-----KLETINKRVFQISC 1682

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
            G  Y LA+  +G V+S+G+ S+  +G G  +   +P    T    G  + +V AG  H +
Sbjct: 1683 GAEYTLALDEDGNVWSWGNNSDGQVGCGHFNKVHEPLLTLT----GHRIKQVRAGKTHSI 1738

Query: 337  ALDS 340
            A  S
Sbjct: 1739 AWTS 1742


>gi|55832181|gb|AAV66579.1| HECT and RCC1 containing protein 4 isoform 3 [Homo sapiens]
          Length = 979

 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 107/226 (47%), Gaps = 7/226 (3%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGV 263



 Score = 78.6 bits (192), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   +        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V +IA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 95/213 (44%), Gaps = 9/213 (4%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           P+ +++    GI  ++V+AG  H   L  SG +
Sbjct: 181 PQLLKSLL--GIPFMQVAAGGAHSFVLTLSGAI 211


>gi|405964700|gb|EKC30153.1| Serine/threonine-protein kinase Nek8 [Crassostrea gigas]
          Length = 774

 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 60/181 (33%), Positives = 91/181 (50%), Gaps = 11/181 (6%)

Query: 153 SFTRINFPSA-AHVVQVSASENHAAFVLQSGQVFTCGDNS----SFCCGHRDTNRPIFRP 207
           S  ++  PS+   V QVS      A V ++G++F    ++    +   G  +++   + P
Sbjct: 323 SPVKLPLPSSDTQVTQVSTGRTQKAAVTKNGRLFVWESSNVGTDTLIPGATESHTLTYVP 382

Query: 208 RLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE 267
           R +E   GV  +QV  G  FT  LT RG + T GS  +G LGHG+  D    K +  L  
Sbjct: 383 RYLEGQSGVNIQQVACGDLFTACLTDRGILMTFGSGVYGCLGHGNYNDVAQAKIVEDL-- 440

Query: 268 VG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAI---QTFRRKGI 323
           +G  VVQ++ G S++LAVT    V+S+G G N  LG G+Q     PR +   +  R   +
Sbjct: 441 LGYEVVQVSCGASHVLAVTNEHEVFSWGRGDNGRLGLGDQESHSSPRPVVIPEPLRPSSV 500

Query: 324 H 324
           H
Sbjct: 501 H 501



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 61/235 (25%), Positives = 95/235 (40%), Gaps = 42/235 (17%)

Query: 104 SDIVETSAGN--MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETT----QCVSFTR 156
           + IVE   G   +Q++ G  H L ++N   VFS G    G LG G + +    + V    
Sbjct: 434 AKIVEDLLGYEVVQVSCGASHVLAVTNEHEVFSWGRGDNGRLGLGDQESHSSPRPVVIPE 493

Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR--------PR 208
              PS+ H              +    + T  DN   CCG    N+             +
Sbjct: 494 PLRPSSVHCG------------VDCSMILTL-DNKLLCCGSNRYNKLALDVIATDGTCMK 540

Query: 209 LVEALK-----------GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP 257
           LV+ +             +  K V  G + T  +T+ G  +T G+N  GQLG+     R 
Sbjct: 541 LVDEIHTFVQTASHPIGNLLVKGVAMGTSHTAAVTVEGQCYTFGTNQFGQLGNQTNNSR- 599

Query: 258 TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQP 312
            P+ +  + +   V  +A G ++ + V   G VYSFG+ S   LG  E+ D  +P
Sbjct: 600 QPQEVK-IAQTQKVAMVACGDTFTVIVADEGEVYSFGNQSRGRLGRPEE-DPTEP 652


>gi|442318560|ref|YP_007358581.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
 gi|441486202|gb|AGC42897.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
          Length = 866

 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 75/241 (31%), Positives = 112/241 (46%), Gaps = 19/241 (7%)

Query: 104 SDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA 163
           S IV+T+ G+       +   L +  +V++ G +  G LG+G   T     T    P  +
Sbjct: 499 SGIVKTAGGSA------HSVALGAGGAVWTWGYNAYGQLGNG---TTTQVVTPTQLPGMS 549

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
            V+ V+A  NH   +   G V   G N+    G+  T   +  P+ V  L GV    ++A
Sbjct: 550 GVIDVAAGVNHTVALSADGTVAAWGYNAYGQLGNGTTANQL-TPQSVPELDGVTA--ISA 606

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G   T  L   G V   GSN +GQLG G    R +P  +  LE   +VV IAAG  + +A
Sbjct: 607 GSTHTVALKADGTVWAWGSNLYGQLGDGTFTHRSSPVQVPSLE---NVVSIAAGHFHTVA 663

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           V G+G ++ +G G    LG G   ++  P  +        H V ++AG  H VAL ++G 
Sbjct: 664 VKGDGTLWVWGYGPQGQLGLGTTTNQSVPVQVSGLG----HAVAIAAGGYHTVALLANGQ 719

Query: 344 V 344
           V
Sbjct: 720 V 720



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 64/222 (28%), Positives = 103/222 (46%), Gaps = 14/222 (6%)

Query: 117 TTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHA 175
           + G  H++ ++ + SV++ GS+  G LG G  T + V    +  P  + VV V+A+ +  
Sbjct: 201 SAGAEHSVAVTEDGSVWTWGSNAYGQLGDGTNTLRAVP---VQVPGMSDVVAVAAAGSRT 257

Query: 176 AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 235
             +   G V+T G NSS   G   T   +  P  V  L GV    + AGL  T  +   G
Sbjct: 258 VALKADGTVWTWGINSSGELGDGTTTHSLL-PIQVPNLSGV--TNIAAGLWHTLAVKKDG 314

Query: 236 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
              + G+N +GQLG G TL+R  P  +A L     V  ++ G  + +A+  +G  + +G 
Sbjct: 315 SAWSWGNNAYGQLGDGTTLNRLRPVLVAGLT---GVRALSGGVVHTVALKWDGTAWGWGY 371

Query: 296 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            S   LG+G   +   P  +    +     V + AG  H +A
Sbjct: 372 NSAGQLGNGTTTNSSIPVQVAALTQ----AVEIDAGGYHTLA 409



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/213 (30%), Positives = 106/213 (49%), Gaps = 14/213 (6%)

Query: 130 SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 189
           ++F+ G +  G LG G  TTQ  S T +     + +V+ +    H+  +   G V+T G 
Sbjct: 470 TLFAWGHNTNGELGDG-TTTQRTSPTAV---VVSGIVKTAGGSAHSVALGAGGAVWTWGY 525

Query: 190 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
           N+    G+  T + +   +L   + GV    V AG+N T  L+  G V   G N +GQLG
Sbjct: 526 NAYGQLGNGTTTQVVTPTQL-PGMSGV--IDVAAGVNHTVALSADGTVAAWGYNAYGQLG 582

Query: 250 HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE 309
           +G T ++ TP+S+  L+    V  I+AG ++ +A+  +G V+++GS     LG G     
Sbjct: 583 NGTTANQLTPQSVPELD---GVTAISAGSTHTVALKADGTVWAWGSNLYGQLGDGTFTHR 639

Query: 310 LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
             P  + +      +VV ++AG  H VA+   G
Sbjct: 640 SSPVQVPSLE----NVVSIAAGHFHTVAVKGDG 668



 Score = 64.3 bits (155), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 69/238 (28%), Positives = 104/238 (43%), Gaps = 17/238 (7%)

Query: 112 GNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
           G   I+ G  HT+ L ++ +V++ GS+L G LG G  T +    + +  PS  +VV ++A
Sbjct: 600 GVTAISAGSTHTVALKADGTVWAWGSNLYGQLGDGTFTHRS---SPVQVPSLENVVSIAA 656

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCG-HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              H   V   G ++  G       G    TN+ +  P  V  L       + AG   T 
Sbjct: 657 GHFHTVAVKGDGTLWVWGYGPQGQLGLGTTTNQSV--PVQVSGLG--HAVAIAAGGYHTV 712

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
            L   G V T G N+ GQLG    + R +P  +  L    +V+ +AAG      +  +G 
Sbjct: 713 ALLANGQVWTWGYNSSGQLGDATIIQRYSPVLVPGLT---NVIALAAGGYTTAVLKRDGT 769

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSLC 347
           V++FG   N  LG G       P A  T       VV +S+G  H++ L    +V  C
Sbjct: 770 VWAFGYNPNGQLGDGTTTSRSSPTA--TLMNS---VVDLSSGVNHMMGLRKDAWVRAC 822



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 61/210 (29%), Positives = 91/210 (43%), Gaps = 11/210 (5%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + I  G +HT+ +  + +++  G    G LG G  T Q V    +      H V ++A  
Sbjct: 652 VSIAAGHFHTVAVKGDGTLWVWGYGPQGQLGLGTTTNQSVP---VQVSGLGHAVAIAAGG 708

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H   +L +GQV+T G NSS   G   T    + P LV  L  V    + AG   T  L 
Sbjct: 709 YHTVALLANGQVWTWGYNSSGQLGDA-TIIQRYSPVLVPGLTNVIA--LAAGGYTTAVLK 765

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G V   G N +GQLG G T  R +P +      + SVV +++G ++M+ +  +  V +
Sbjct: 766 RDGTVWAFGYNPNGQLGDGTTTSRSSPTATL----MNSVVDLSSGVNHMMGLRKDAWVRA 821

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
            G  S   LG G       P  +      G
Sbjct: 822 CGYNSAGQLGDGTTTQRPTPVQVTNLPGDG 851



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 76/161 (47%), Gaps = 10/161 (6%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + I  G YHT+ L++N  V++ G +  G LG   + T    ++ +  P   +V+ ++A  
Sbjct: 702 VAIAAGGYHTVALLANGQVWTWGYNSSGQLG---DATIIQRYSPVLVPGLTNVIALAAGG 758

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
              A + + G V+  G N +   G    T+R      L+ ++       +++G+N    L
Sbjct: 759 YTTAVLKRDGTVWAFGYNPNGQLGDGTTTSRSSPTATLMNSVV-----DLSSGVNHMMGL 813

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
                V  CG N+ GQLG G T  RPTP  +  L   GS+V
Sbjct: 814 RKDAWVRACGYNSAGQLGDGTTTQRPTPVQVTNLPGDGSIV 854



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 105/240 (43%), Gaps = 28/240 (11%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           ++ G  HT+ L  + + +  G +  G LG+G  T   +    +   +    V++ A   H
Sbjct: 350 LSGGVVHTVALKWDGTAWGWGYNSAGQLGNGTTTNSSIP---VQVAALTQAVEIDAGGYH 406

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNR---PIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
                Q G ++  GDN     G  +T     P+  P     L GV  +   AG  ++   
Sbjct: 407 TLARRQDGTLYAWGDNFYGALGTGNTTSSSVPVQVP-----LSGV--RWFGAGYYYSVAE 459

Query: 232 TIR---GHVHT---CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
             +     VHT    G NT+G+LG G T  R +P ++     V  +V+ A G ++ +A+ 
Sbjct: 460 RKKVNMAQVHTLFAWGHNTNGELGDGTTTQRTSPTAVV----VSGIVKTAGGSAHSVALG 515

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVS 345
             G V+++G  +   LG+G     + P  +         V+ V+AG  H VAL + G V+
Sbjct: 516 AGGAVWTWGYNAYGQLGNGTTTQVVTPTQLPGMS----GVIDVAAGVNHTVALSADGTVA 571



 Score = 55.1 bits (131), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 55/176 (31%), Positives = 79/176 (44%), Gaps = 12/176 (6%)

Query: 168 VSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
           VS    H   V   G ++  G+N S   G+ + T R    P  V  L  V     +AG  
Sbjct: 150 VSPGVYHTLEVKSGGSLWAWGNNPSGQLGNGQRTQRN--APTRVRGLNQV--VSASAGAE 205

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
            +  +T  G V T GSN +GQLG G    R  P  +  + +   VV +AA  S  +A+  
Sbjct: 206 HSVAVTEDGSVWTWGSNAYGQLGDGTNTLRAVPVQVPGMSD---VVAVAAAGSRTVALKA 262

Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           +G V+++G  S+  LG G     L P  IQ     G  V  ++AG  H +A+   G
Sbjct: 263 DGTVWTWGINSSGELGDGTTTHSLLP--IQVPNLSG--VTNIAAGLWHTLAVKKDG 314



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 58/127 (45%), Gaps = 7/127 (5%)

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG 277
           C  V+ G+  T  +   G +   G+N  GQLG+G    R  P  +  L +   VV  +AG
Sbjct: 147 CPSVSPGVYHTLEVKSGGSLWAWGNNPSGQLGNGQRTQRNAPTRVRGLNQ---VVSASAG 203

Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             + +AVT +G V+++GS +   LG G       P  +         VV V+A     VA
Sbjct: 204 AEHSVAVTEDGSVWTWGSNAYGQLGDGTNTLRAVPVQVPGMS----DVVAVAAAGSRTVA 259

Query: 338 LDSSGYV 344
           L + G V
Sbjct: 260 LKADGTV 266



 Score = 41.6 bits (96), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 81/353 (22%), Positives = 128/353 (36%), Gaps = 78/353 (22%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCN--GNWKRVLRFLQ-SVEHSSDI 106
           P + R L  + ++   A HS+      +V     N     G+    LR +   V   SD+
Sbjct: 188 PTRVRGLNQVVSASAGAEHSVAVTEDGSVWTWGSNAYGQLGDGTNTLRAVPVQVPGMSDV 247

Query: 107 VETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV 166
           V  +A       G     L ++ +V++ G +  G LG G   T   S   I  P+ + V 
Sbjct: 248 VAVAA------AGSRTVALKADGTVWTWGINSSGELGDG---TTTHSLLPIQVPNLSGVT 298

Query: 167 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGV--------- 216
            ++A   H   V + G  ++ G+N+    G   T NR   RP LV  L GV         
Sbjct: 299 NIAAGLWHTLAVKKDGSAWSWGNNAYGQLGDGTTLNR--LRPVLVAGLTGVRALSGGVVH 356

Query: 217 ----------------PCKQVTAG-------------------LNFTGFLTI----RGHV 237
                              Q+  G                   ++  G+ T+     G +
Sbjct: 357 TVALKWDGTAWGWGYNSAGQLGNGTTTNSSIPVQVAALTQAVEIDAGGYHTLARRQDGTL 416

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA------VTGNGVVY 291
           +  G N +G LG G+T     P  + PL     V    AG  Y +A      +     ++
Sbjct: 417 YAWGDNFYGALGTGNTTSSSVPVQV-PLS---GVRWFGAGYYYSVAERKKVNMAQVHTLF 472

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           ++G  +N  LG G       P A+         +V+ + G  H VAL + G V
Sbjct: 473 AWGHNTNGELGDGTTTQRTSPTAVVVS-----GIVKTAGGSAHSVALGAGGAV 520


>gi|414585739|tpg|DAA36310.1| TPA: putative regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 1044

 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/177 (29%), Positives = 94/177 (53%), Gaps = 9/177 (5%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  ++  E HAA + + G+V++ G+ SS   G++  N  + RP++V++L  +  K V  G
Sbjct: 266 VQSIACGETHAAIITKQGEVYSWGNESSGRIGNQ-VNIKVSRPKVVQSLASLHVKDVAYG 324

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP---KSIAPLEEVGSVVQIAAGPSYM 281
              T  +T+ G +   G   +  +G  D+  R      K  +PL+ + SVV+IA GP + 
Sbjct: 325 SKHTCAVTVSGELIEWGEGPY--MGQLDSYARNQWFPHKLFSPLDGI-SVVKIACGPWHT 381

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             +T +G +Y++G G+   LGHG+     +P+ +++   KG  V  V+ G  H  A+
Sbjct: 382 AIITSSGQLYTYGDGTFGVLGHGDTQGTTRPKEVESL--KGSRVKCVACGPWHTAAI 436



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 109/244 (44%), Gaps = 25/244 (10%)

Query: 122 HTLLISNSSVFSCGSSLCGVL---GHGPETTQCVSFTRIN-FP-------SAAHVVQVSA 170
           H   ++  S  +C  ++ G L   G GP   Q  S+ R   FP           VV+++ 
Sbjct: 317 HVKDVAYGSKHTCAVTVSGELIEWGEGPYMGQLDSYARNQWFPHKLFSPLDGISVVKIAC 376

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
              H A +  SGQ++T GD +    GH DT +   RP+ VE+LKG   K V  G   T  
Sbjct: 377 GPWHTAIITSSGQLYTYGDGTFGVLGHGDT-QGTTRPKEVESLKGSRVKCVACGPWHTAA 435

Query: 231 L----------TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           +          + R  + T G    G+LGH D   +  P  +  L +    +Q++ G + 
Sbjct: 436 IVEVISDFKSNSPRSKLFTWGDADRGKLGHADKKMKLIPTCVDSLTDY-DFIQVSCGTAL 494

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            +A++  GVV++ GS  +  LG+    D     A++    K   V  +S+G  HV  + +
Sbjct: 495 TVALSVTGVVFTSGSSMHGQLGN-PHADGKTVSAVEGL-LKSEFVRHISSGSSHVAVVTT 552

Query: 341 SGYV 344
           +G V
Sbjct: 553 NGKV 556



 Score = 46.2 bits (108), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 45/166 (27%), Positives = 75/166 (45%), Gaps = 11/166 (6%)

Query: 129 SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
           S +F+ G +  G LGH  +  + +  T ++  +    +QVS        +  +G VFT G
Sbjct: 450 SKLFTWGDADRGKLGHADKKMKLIP-TCVDSLTDYDFIQVSCGTALTVALSVTGVVFTSG 508

Query: 189 DNSSFCCGHRDTNRPIFRPRLVEALKGVP----CKQVTAGLNFTGFLTIRGHVHTCGSNT 244
            +      H     P    + V A++G+      + +++G +    +T  G V T G   
Sbjct: 509 SSM-----HGQLGNPHADGKTVSAVEGLLKSEFVRHISSGSSHVAVVTTNGKVFTWGKGK 563

Query: 245 HGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            GQLG GD L+R TP  +  LE    V  ++ G +Y  AV  + V+
Sbjct: 564 EGQLGLGDFLNRSTPTLVDALEG-RHVESLSCGYNYTAAVCLHKVI 608


>gi|307109549|gb|EFN57787.1| hypothetical protein CHLNCDRAFT_10671, partial [Chlorella
           variabilis]
          Length = 272

 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 76/258 (29%), Positives = 123/258 (47%), Gaps = 18/258 (6%)

Query: 93  VLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQC 151
           V R ++ ++ S D+V  +AG +       HT  + S+  ++  GS+    LG   + +  
Sbjct: 23  VPRLVKGLK-SRDVVNLAAGAL-------HTAAVTSDGELYVMGSNEESQLGV-RQRSDA 73

Query: 152 VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE 211
           ++ TR+       V +V+    H   V+  G V   G       G       +  PR+V+
Sbjct: 74  LAPTRVTALEQFQVQRVACGPAHTLAVVDGGAVAAFGSAEYGQVGLGPCGARVELPRVVK 133

Query: 212 ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV 271
            L+ +   +V AG + T  L+  G V +CG+ + G LG G T     P+ I+ L  +G V
Sbjct: 134 DLRSMHIVRVAAGGSHTLALSSTGGVFSCGNGSFGALGRGTTEGNDVPRPISRLWPLG-V 192

Query: 272 VQIAAGPSYMLAVTGNGVVYSFGSGSN-----FCLGHGEQHDELQPRAIQTFRRKGIHVV 326
           VQIA G ++  A+T +G V ++G G +     F  GHG+  +   P+ +Q    KGI   
Sbjct: 193 VQIACGENHSAAITADGRVLTWGRGKHRLLPAFHCGHGDFENCSTPKPVQAL--KGIVGR 250

Query: 327 RVSAGDEHVVALDSSGYV 344
           +VS GD+H V L   G V
Sbjct: 251 QVSCGDDHTVLLTEDGSV 268



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/165 (34%), Positives = 81/165 (49%), Gaps = 7/165 (4%)

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           VF  GD      G   +   +F PRLV+ LK      + AG   T  +T  G ++  GSN
Sbjct: 4   VFGRGDMGQLGDG---STEDVFVPRLVKGLKSRDVVNLAAGALHTAAVTSDGELYVMGSN 60

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 303
              QLG     D   P  +  LE+   V ++A GP++ LAV   G V +FGS     +G 
Sbjct: 61  EESQLGVRQRSDALAPTRVTALEQF-QVQRVACGPAHTLAVVDGGAVAAFGSAEYGQVGL 119

Query: 304 GEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSLC 347
           G     ++ PR ++  R   +H+VRV+AG  H +AL S+G V  C
Sbjct: 120 GPCGARVELPRVVKDLRS--MHIVRVAAGGSHTLALSSTGGVFSC 162



 Score = 64.3 bits (155), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 49/135 (36%), Positives = 71/135 (52%), Gaps = 10/135 (7%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           +++  G  HTL +S++  VFSCG+   G LG G  TT+     R I+      VVQ++  
Sbjct: 141 VRVAAGGSHTLALSSTGGVFSCGNGSFGALGRG--TTEGNDVPRPISRLWPLGVVQIACG 198

Query: 172 ENHAAFVLQSGQVFTCGDNS-----SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
           ENH+A +   G+V T G        +F CGH D       P+ V+ALKG+  +QV+ G +
Sbjct: 199 ENHSAAITADGRVLTWGRGKHRLLPAFHCGHGDFEN-CSTPKPVQALKGIVGRQVSCGDD 257

Query: 227 FTGFLTIRGHVHTCG 241
            T  LT  G V+  G
Sbjct: 258 HTVLLTEDGSVYAWG 272


>gi|301767480|ref|XP_002919156.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like
           [Ailuropoda melanoleuca]
          Length = 551

 Score = 79.0 bits (193), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 93/218 (42%), Gaps = 4/218 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  +F  G++ CG LG G +    +   R++  S   +  +S  S  H       G+VFT
Sbjct: 64  NDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFT 122

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN  +    +   L      +V  G   +  LT  G V   G N  G
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSG 182

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T ++P P+ +    +    V IA G    +AV   G VY +G   N  LG G  
Sbjct: 183 QVGSGSTANQPIPRRVTGCLQNKVAVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSS 242

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            +  QP   +    +GI V RV+ G  H + L   G V
Sbjct: 243 GN--QPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQV 278



 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 94/195 (48%), Gaps = 11/195 (5%)

Query: 107 VETSAGNMQITT---GRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA 162
           + T+  N Q+T    G YH+L L S+  VF+ G +  G +G G    Q +          
Sbjct: 145 ISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQN 204

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQV 221
              V ++  +  +  V+ +G+V+  G N +   G   + N+P   P  + AL+G+  ++V
Sbjct: 205 KVAVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPT--PCRIAALQGIRVQRV 262

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS-- 279
             G   T  LT  G V+  G+N++GQLG G+  ++  P  +  + E   +++IAA  S  
Sbjct: 263 ACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPAPV--IVEKDRIIEIAACHSAH 320

Query: 280 YMLAVTGNGVVYSFG 294
              A T  G VY +G
Sbjct: 321 TSAAKTQGGHVYMWG 335



 Score = 38.5 bits (88), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 64/145 (44%), Gaps = 6/145 (4%)

Query: 203 PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 260
           PIF     E L+ +   C   +AG N   + T+   +   G+N  G LG GD      P+
Sbjct: 32  PIFSLCSEEELQLIRQACVFGSAG-NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPR 90

Query: 261 SIAPLE-EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
            +  L  +  + +   +GP  +LA T  G V+++G  +   LG+G  +  L P  I T  
Sbjct: 91  RLDSLSGKKIACLSYGSGPHIVLATT-EGEVFTWGHNAYSQLGNGTTNHGLVPCHIST-N 148

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYV 344
                V  V+ G  H + L S G V
Sbjct: 149 LSNKQVTEVACGSYHSLVLTSDGEV 173


>gi|449484061|ref|XP_002195626.2| PREDICTED: RCC1 and BTB domain-containing protein 2 [Taeniopygia
           guttata]
          Length = 526

 Score = 79.0 bits (193), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 96/219 (43%), Gaps = 4/219 (1%)

Query: 127 SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVF 185
            N  VF  G +  G LG G +    +   R++      +  +S  S  H     + G+V+
Sbjct: 39  ENDEVFVLGMNCSGCLGTG-DMQSTIEPRRLDSLCGKKIACLSYGSGPHVVLATEEGEVY 97

Query: 186 TCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH 245
           T G N+    G+  TN      ++   L      +V  G + +  LT  G V+T G N  
Sbjct: 98  TWGHNAYSQLGNGTTNHGFVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTWGYNNS 157

Query: 246 GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
           GQ+G G T ++P P+ +    +   VV IA G    +AV  NG VY +G   N  LG G 
Sbjct: 158 GQVGSGSTANQPIPRRVTSCLQNKIVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGS 217

Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             ++  P  I     +GI V RV+ G  H + L   G +
Sbjct: 218 SGNQPTPCRIAAL--QGIRVQRVACGYAHTLVLTDEGQI 254



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 95/185 (51%), Gaps = 8/185 (4%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G +H++ L S+  V++ G +  G +G G    Q +     +      VV ++  +
Sbjct: 131 IEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKIVVNIACGQ 190

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             +  V+++G+V+  G N +   G   + N+P   P  + AL+G+  ++V  G   T  L
Sbjct: 191 MCSMAVVENGEVYVWGYNGNGQLGLGSSGNQPT--PCRIAALQGIRVQRVACGYAHTLVL 248

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS--YMLAVTGNGV 289
           T  G ++  G+N++GQLG G+  ++  P ++   ++   V++IAA  S     A T +G 
Sbjct: 249 TDEGQIYAWGANSYGQLGTGNKSNQSYPTTVVVDKD--RVIEIAACHSAHTSAAKTQSGQ 306

Query: 290 VYSFG 294
           VY +G
Sbjct: 307 VYMWG 311


>gi|345788791|ref|XP_542564.3| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
           [Canis lupus familiaris]
          Length = 529

 Score = 79.0 bits (193), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 94/218 (43%), Gaps = 4/218 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  +F  G++ CG LG G +    +   R++  S   +  +S  S  H       G+VFT
Sbjct: 64  NDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDALSGKKIACLSYGSGPHIVLATTEGEVFT 122

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN  +    +   L      +V  G   +  LT  G V   G N  G
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSG 182

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T ++P P+ +    +   VV IA G    +AV   G VY +G   N  LG G  
Sbjct: 183 QVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSS 242

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            ++  P  I     +GI + RV+ G  H + L   G V
Sbjct: 243 GNQPTPCRIAAL--QGIRIQRVACGYAHTLVLTDEGQV 278



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 95/195 (48%), Gaps = 11/195 (5%)

Query: 107 VETSAGNMQITT---GRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA 162
           + T+  N Q+T    G YH+L L S+  VF+ G +  G +G G    Q +          
Sbjct: 145 ISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQN 204

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQV 221
             VV ++  +  +  V+ +G+V+  G N +   G   + N+P   P  + AL+G+  ++V
Sbjct: 205 KVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPT--PCRIAALQGIRIQRV 262

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY- 280
             G   T  LT  G V+  G+N++GQLG G+  ++  P  +  + E   +V+IAA  S  
Sbjct: 263 ACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPAPV--VVEKDRIVEIAACHSAH 320

Query: 281 -MLAVTGNGVVYSFG 294
              A T  G VY +G
Sbjct: 321 TSAAKTQGGHVYMWG 335


>gi|313220445|emb|CBY31298.1| unnamed protein product [Oikopleura dioica]
          Length = 1097

 Score = 79.0 bits (193), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 65/265 (24%), Positives = 118/265 (44%), Gaps = 21/265 (7%)

Query: 94  LRFLQSVEHSSDIVETSAGNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCV 152
            R      +SS   +     M I +G  HTL++  N+ V+  GS+  G LG G +  +  
Sbjct: 453 FRLTSGTCNSSAAFQKGLNIMDIGSGDRHTLILDVNNVVYGVGSNDLGQLGFGSQMPRIE 512

Query: 153 SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA 212
           +   + F +   V  +    + + F++    VFTCG+  + C GH   ++    P +V+ 
Sbjct: 513 NPEPVKFSTNRPVQAIGTGADFSVFLMNK-MVFTCGNGENGCLGHGSEHKSSMFPNMVQD 571

Query: 213 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
           L      +++AG      LT  G V++ G    G+LGHG      +P+ I  L+E   + 
Sbjct: 572 LISYDVVKISAGYKHVLALTSDGDVYSWGCGELGRLGHGGQGSEFSPRKITSLQE--KIK 629

Query: 273 QIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGHGEQ---------HDELQPRAIQTFRRK 321
           +I AG   S+ + ++GN  +Y  GS  +  +G  ++         H  + P        +
Sbjct: 630 EIYAGYDSSFFIGISGN--MYVCGSNRDNKIGLQKRSMLDIFRLGHSRIPPYKDTPILSR 687

Query: 322 GIH----VVRVSAGDEHVVALDSSG 342
            ++    + ++S   +H V L S+G
Sbjct: 688 QLNSNQTISKISQARDHTVVLTSTG 712



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 47/138 (34%), Positives = 69/138 (50%), Gaps = 16/138 (11%)

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR---PTPKSIA---PLEE 267
           KG+    + +G   T  L +   V+  GSN  GQLG G  + R   P P   +   P++ 
Sbjct: 468 KGLNIMDIGSGDRHTLILDVNNVVYGVGSNDLGQLGFGSQMPRIENPEPVKFSTNRPVQA 527

Query: 268 VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVV 326
           +G+     A  S  L    N +V++ G+G N CLGHG +H   + P  +Q        VV
Sbjct: 528 IGT----GADFSVFLM---NKMVFTCGNGENGCLGHGSEHKSSMFPNMVQDL--ISYDVV 578

Query: 327 RVSAGDEHVVALDSSGYV 344
           ++SAG +HV+AL S G V
Sbjct: 579 KISAGYKHVLALTSDGDV 596



 Score = 42.0 bits (97), Expect = 0.48,   Method: Composition-based stats.
 Identities = 51/203 (25%), Positives = 85/203 (41%), Gaps = 29/203 (14%)

Query: 103 SSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA 162
           S D+V+ SAG   +        L S+  V+S G    G LGHG + ++   F+     S 
Sbjct: 574 SYDVVKISAGYKHVLA------LTSDGDVYSWGCGELGRLGHGGQGSE---FSPRKITSL 624

Query: 163 AHVV-QVSASENHAAFVLQSGQVFTCGDNSSFCCG-HRDTNRPIFR------------PR 208
              + ++ A  + + F+  SG ++ CG N     G  + +   IFR            P 
Sbjct: 625 QEKIKEIYAGYDSSFFIGISGNMYVCGSNRDNKIGLQKRSMLDIFRLGHSRIPPYKDTPI 684

Query: 209 LVEALKG-VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG--HGDTLDRPTPKSIAPL 265
           L   L       +++   + T  LT  G + T G N+ GQ G  +  ++   +P  I  +
Sbjct: 685 LSRQLNSNQTISKISQARDHTVVLTSTGQLFTMGRNSEGQRGLENSRSMIDCSPIQIPKI 744

Query: 266 E--EVGSVVQIAAGPSYMLAVTG 286
           +   V S+  IA G S+M  +  
Sbjct: 745 DGKNVQSITHIATG-SFMTCIAA 766


>gi|125972780|ref|YP_001036690.1| dockerin type I cellulosome protein [Clostridium thermocellum ATCC
           27405]
 gi|256004969|ref|ZP_05429941.1| cellulosome protein dockerin type I [Clostridium thermocellum DSM
           2360]
 gi|281416977|ref|ZP_06247997.1| Dockerin type 1 [Clostridium thermocellum JW20]
 gi|385779304|ref|YP_005688469.1| Dockerin type 1 [Clostridium thermocellum DSM 1313]
 gi|419721626|ref|ZP_14248784.1| Dockerin type 1 protein [Clostridium thermocellum AD2]
 gi|419725441|ref|ZP_14252484.1| Dockerin type 1 protein [Clostridium thermocellum YS]
 gi|125713005|gb|ABN51497.1| Dockerin type 1 [Clostridium thermocellum ATCC 27405]
 gi|255991038|gb|EEU01148.1| cellulosome protein dockerin type I [Clostridium thermocellum DSM
           2360]
 gi|281408379|gb|EFB38637.1| Dockerin type 1 [Clostridium thermocellum JW20]
 gi|316940984|gb|ADU75018.1| Dockerin type 1 [Clostridium thermocellum DSM 1313]
 gi|380771190|gb|EIC05067.1| Dockerin type 1 protein [Clostridium thermocellum YS]
 gi|380782322|gb|EIC11962.1| Dockerin type 1 protein [Clostridium thermocellum AD2]
          Length = 469

 Score = 79.0 bits (193), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 60/202 (29%), Positives = 99/202 (49%), Gaps = 14/202 (6%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINF-PSAAH----VVQVSASENHAAFVL 179
           L  + +V++ G ++ G LG+G +    +  T I F P+ A     +V ++A + H+  + 
Sbjct: 277 LREDGTVWTWGENVWGQLGNGWQQHHNIH-TYIYFEPNQAKNLSDIVSIAAGDAHSVALK 335

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             G V+T G N +   G+  T   I  P+ VE L+ +    + AG+  T  L   G V  
Sbjct: 336 SDGTVWTWGSNFNGELGNGTTTY-ILEPKKVEGLEDIVA--IDAGIGHTVALKADGTVWV 392

Query: 240 CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
            G N++GQLG+G T+    P  +  LE    +V I AG    +A   +G V+++G     
Sbjct: 393 WGKNSYGQLGNGTTMRSTVPIQVEGLE---GIVAIQAGMECTIAYKNDGTVWAWGKNDFG 449

Query: 300 CLGHGEQHDELQPRAIQTFRRK 321
            LG G   + L+P  ++ F RK
Sbjct: 450 QLGDGTFENILRP--VKVFERK 469



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 59/252 (23%), Positives = 108/252 (42%), Gaps = 32/252 (12%)

Query: 111 AGNMQITTGRYHTL-LISNSSVFSCGSS----LCGVLGHGPETTQCVSFTRINFPSAAHV 165
           +G   +  GR HTL L  + ++++ G++    L   +   P+T +  +   I   + + +
Sbjct: 159 SGIKSVAAGREHTLALQEDGTLWAWGNNYSLQLIEYMERDPDTKERFTSIPIKVETHSDI 218

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPI-FRPRLVEALKGVPCKQVTAG 224
             V+A  +    V   G V+       +     +T+    + P  ++    +    +  G
Sbjct: 219 KYVAAKFSRTLIVKNDGTVWL------YSLPPINTSSDAEYMPWEIKGFGDIKMADIGTG 272

Query: 225 LNFTGFLTIR--GHVHTCGSNTHGQLGHG-------DTLDRPTPKSIAPLEEVGSVVQIA 275
                 + +R  G V T G N  GQLG+G        T     P     L ++   V IA
Sbjct: 273 ----HIVALREDGTVWTWGENVWGQLGNGWQQHHNIHTYIYFEPNQAKNLSDI---VSIA 325

Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           AG ++ +A+  +G V+++GS  N  LG+G     L+P+ ++        +V + AG  H 
Sbjct: 326 AGDAHSVALKSDGTVWTWGSNFNGELGNGTTTYILEPKKVEGLE----DIVAIDAGIGHT 381

Query: 336 VALDSSGYVSLC 347
           VAL + G V + 
Sbjct: 382 VALKADGTVWVW 393


>gi|313221348|emb|CBY32102.1| unnamed protein product [Oikopleura dioica]
          Length = 1199

 Score = 79.0 bits (193), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 52/175 (29%), Positives = 83/175 (47%), Gaps = 4/175 (2%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           VVQV+    H   + + G + + G N+    G   +      P ++ +L   P  Q+ AG
Sbjct: 134 VVQVACGAQHCIALTEEGTILSWGSNTQGQLGLGSSEIEFLEPTIIASLNAFPISQICAG 193

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
              +G L+  G + T G N  GQLGHG++   + +P+ +  L     VV +A G  + + 
Sbjct: 194 AYHSGVLSPSGTLFTWGKNNWGQLGHGNSDSFQSSPRLVKTLRH-QEVVFVAMGEEHSVC 252

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            T NG V+S+G G N  LGH    +  QP+ I      G  V ++  G  H ++L
Sbjct: 253 RTRNGGVFSWGHGGNGQLGHNSMANVTQPKKIMELM--GTTVCQICCGRRHTISL 305



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 72/244 (29%), Positives = 115/244 (47%), Gaps = 17/244 (6%)

Query: 107 VETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV 165
           ++ +   + I +G  HT+ L S   V+SCGS+  G LG   + +QC       F  A  +
Sbjct: 27  IDANQSVISIASGLRHTVYLTSTRKVYSCGSNEFGQLGQ--QKSQCRPSLVTGF-GAEEI 83

Query: 166 VQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
             V+A +  +  + +SG +F  G   N    C        +  P+L++ +      QV  
Sbjct: 84  FHVAAGDFFSIAIAESGLLFGWGRSLNGELMCKQDS----LHEPKLLDKIMHWSVVQVAC 139

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDT-LDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
           G      LT  G + + GSNT GQLG G + ++   P  IA L     + QI AG  +  
Sbjct: 140 GAQHCIALTEEGTILSWGSNTQGQLGLGSSEIEFLEPTIIASLNAF-PISQICAGAYHSG 198

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQ--PRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            ++ +G ++++G  +   LGHG   D  Q  PR ++T R +   VV V+ G+EH V    
Sbjct: 199 VLSPSGTLFTWGKNNWGQLGHGNS-DSFQSSPRLVKTLRHQ--EVVFVAMGEEHSVCRTR 255

Query: 341 SGYV 344
           +G V
Sbjct: 256 NGGV 259



 Score = 64.7 bits (156), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 89/191 (46%), Gaps = 4/191 (2%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G  H + L    ++ S GS+  G LG G    + +  T I   +A  + Q+ A  
Sbjct: 135 VQVACGAQHCIALTEEGTILSWGSNTQGQLGLGSSEIEFLEPTIIASLNAFPISQICAGA 194

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +FT G N+    GH +++     PRLV+ L+      V  G   +   T
Sbjct: 195 YHSGVLSPSGTLFTWGKNNWGQLGHGNSDSFQSSPRLVKTLRHQEVVFVAMGEEHSVCRT 254

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLAVTGNGVVY 291
             G V + G   +GQLGH    +   PK I  +E +G+ V QI  G  + +++T    + 
Sbjct: 255 RNGGVFSWGHGGNGQLGHNSMANVTQPKKI--MELMGTTVCQICCGRRHTISLTDKRKLL 312

Query: 292 SFGSGSNFCLG 302
            FG  SN  LG
Sbjct: 313 GFGLNSNNQLG 323



 Score = 51.2 bits (121), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 55/216 (25%), Positives = 94/216 (43%), Gaps = 16/216 (7%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
           ++  G +  G LG G E       + I+  +   V+ +++   H  ++  + +V++CG N
Sbjct: 1   MYGWGKNDYGQLGLGSENMLISCPSPID--ANQSVISIASGLRHTVYLTSTRKVYSCGSN 58

Query: 191 SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG- 249
                G     +   RP LV          V AG  F+  +   G +   G + +G+L  
Sbjct: 59  E---FGQLGQQKSQCRPSLVTGFGAEEIFHVAAGDFFSIAIAESGLLFGWGRSLNGELMC 115

Query: 250 HGDTLDRPTPKSIAPLEEV--GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 307
             D+L  P       L+++   SVVQ+A G  + +A+T  G + S+GS +   LG G   
Sbjct: 116 KQDSLHEP-----KLLDKIMHWSVVQVACGAQHCIALTEEGTILSWGSNTQGQLGLGSSE 170

Query: 308 DE-LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            E L+P  I +       + ++ AG  H   L  SG
Sbjct: 171 IEFLEPTIIASL--NAFPISQICAGAYHSGVLSPSG 204


>gi|157137553|ref|XP_001664005.1| Bj1 protein, putative [Aedes aegypti]
 gi|108869688|gb|EAT33913.1| AAEL013820-PA [Aedes aegypti]
          Length = 484

 Score = 79.0 bits (193), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 70/250 (28%), Positives = 107/250 (42%), Gaps = 28/250 (11%)

Query: 122 HTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           H++LI+ +    + G +  G LG   +       T +N      VVQ +   NH  F+  
Sbjct: 126 HSVLITMDRKALAFGRNQHGQLGQS-DLRTFEKPTPVNGLKDVKVVQAACGRNHTLFLTD 184

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           +G V+ CGDN    CG   TN  + +   ++   G P  +V  G  F+  L I G +++ 
Sbjct: 185 NGVVYACGDNRHGQCGVGHTNPTVLKATRLK-YTGPPIVKVACGAEFSMILDINGRLYSF 243

Query: 241 GSNTHGQLGHGD------TLDR------PTPKSIA------------PLEEVGSVVQIAA 276
           G   HGQLGH        T +R        P+ I             P+E+V  ++  A 
Sbjct: 244 GLPEHGQLGHNTDGKYFITANRLAYHYETVPRQIVTYVEKTNEGRTIPIEDV-QILDFAC 302

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
           G ++ +A+      +S+G G    LGH    DE  PR  + F  +   V+RV  G    V
Sbjct: 303 GNNHTVAIDSKNRAFSWGFGGYGRLGHASPQDEWVPRLNKYFDIQKRKVLRVFCGTAFSV 362

Query: 337 ALDSSGYVSL 346
           A+   G V L
Sbjct: 363 AITDVGCVHL 372



 Score = 40.8 bits (94), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 57/260 (21%), Positives = 102/260 (39%), Gaps = 28/260 (10%)

Query: 60  AASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTG 119
           A +  C+ HS+   M R       N+     +  LR  +     + + +     +Q   G
Sbjct: 118 AVTGCCSAHSVLITMDRKALAFGRNQHGQLGQSDLRTFEKPTPVNGLKDVKV--VQAACG 175

Query: 120 RYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           R HTL L  N  V++CG +  G  G G      +  TR+ + +   +V+V+     +  +
Sbjct: 176 RNHTLFLTDNGVVYACGDNRHGQCGVGHTNPTVLKATRLKY-TGPPIVKVACGAEFSMIL 234

Query: 179 LQSGQVFTCGDNSSFCCGHR-DTNRPIFRPRLVEALKGVPCKQVT--------------- 222
             +G++++ G       GH  D    I   RL    + VP + VT               
Sbjct: 235 DINGRLYSFGLPEHGQLGHNTDGKYFITANRLAYHYETVPRQIVTYVEKTNEGRTIPIED 294

Query: 223 -------AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE-EVGSVVQI 274
                   G N T  +  +    + G   +G+LGH    D   P+     + +   V+++
Sbjct: 295 VQILDFACGNNHTVAIDSKNRAFSWGFGGYGRLGHASPQDEWVPRLNKYFDIQKRKVLRV 354

Query: 275 AAGPSYMLAVTGNGVVYSFG 294
             G ++ +A+T  G V+ FG
Sbjct: 355 FCGTAFSVAITDVGCVHLFG 374


>gi|63025188|ref|NP_071362.1| probable E3 ubiquitin-protein ligase HERC4 isoform a [Homo sapiens]
 gi|74707832|sp|Q5GLZ8.1|HERC4_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           4
 gi|37900475|gb|AAO65480.1| HECT and RCC1 containing protein 4 isoform 1 [Homo sapiens]
 gi|119574649|gb|EAW54264.1| hect domain and RLD 4, isoform CRA_d [Homo sapiens]
          Length = 1057

 Score = 79.0 bits (193), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 107/226 (47%), Gaps = 7/226 (3%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGV 263



 Score = 78.2 bits (191), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   +        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V +IA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 95/213 (44%), Gaps = 9/213 (4%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           P+ +++    GI  ++V+AG  H   L  SG +
Sbjct: 181 PQLLKSLL--GIPFMQVAAGGAHSFVLTLSGAI 211


>gi|440898458|gb|ELR49953.1| RCC1 and BTB domain-containing protein 2, partial [Bos grunniens
           mutus]
          Length = 544

 Score = 79.0 bits (193), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 94/218 (43%), Gaps = 4/218 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  +F  G++ CG LG G +    +   R++  S   +  +S  S  H       G+VFT
Sbjct: 57  NDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFT 115

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN  +    +   L      +V  G   +  LT  G V   G N  G
Sbjct: 116 WGHNAYSQLGNGTTNAGLVPYHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 175

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T ++P P+ +    +   VV IA G    +AV   G V+ +G   N  LG G  
Sbjct: 176 QVGSGSTANQPIPRRVTGCLQSKVVVNIACGQMCSMAVVNTGEVFVWGYNGNGQLGLGSS 235

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            +  QP   +    +GI V RV+ G  H + L   G V
Sbjct: 236 GN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQV 271



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 99/209 (47%), Gaps = 3/209 (1%)

Query: 118 TGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 177
           +G +  L  +   VF+ G +    LG+G      V +      S   V++V+    H+  
Sbjct: 100 SGPHIVLATTEGEVFTWGHNAYSQLGNGTTNAGLVPYHISTNLSNKQVIEVACGSYHSLV 159

Query: 178 VLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
           +   G+VF  G N+S   G   T N+PI R R+   L+      +  G   +  +   G 
Sbjct: 160 LTSDGEVFAWGYNNSGQVGSGSTANQPIPR-RVTGCLQSKVVVNIACGQMCSMAVVNTGE 218

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           V   G N +GQLG G + ++PTP  +A L+ +  V ++A G ++ L +T  G VY++G+ 
Sbjct: 219 VFVWGYNGNGQLGLGSSGNQPTPCRVAALQGI-RVQRVACGYAHTLVLTDEGQVYAWGAN 277

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
           S   LG G + ++  P  +   + + I +
Sbjct: 278 SYGQLGTGNKSNQSYPTPVVVEKDRIIEI 306



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 83/177 (46%), Gaps = 5/177 (2%)

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG--VPCKQVTAGLNF 227
           ++ N   +   + ++F  G N   C G  D    I  PR +++L G  + C    +G + 
Sbjct: 46  SASNELLYTTVNDEIFVLGTNCCGCLGLGDVQSTI-EPRRLDSLSGKKIACLSYGSGPHI 104

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
               T  G V T G N + QLG+G T     P  I+       V+++A G  + L +T +
Sbjct: 105 V-LATTEGEVFTWGHNAYSQLGNGTTNAGLVPYHISTNLSNKQVIEVACGSYHSLVLTSD 163

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G V+++G  ++  +G G   ++  PR +    +  + VV ++ G    +A+ ++G V
Sbjct: 164 GEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQSKV-VVNIACGQMCSMAVVNTGEV 219


>gi|383319169|ref|YP_005380010.1| chromosome condensation regulator RCC1 [Methanocella conradii
           HZ254]
 gi|379320539|gb|AFC99491.1| regulator of chromosome condensation RCC1 [Methanocella conradii
           HZ254]
          Length = 438

 Score = 79.0 bits (193), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 75/256 (29%), Positives = 117/256 (45%), Gaps = 36/256 (14%)

Query: 99  SVEHSSDIVETSAGNMQ-ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR 156
           +++H++  +    GN++ +  G  H L + N  +V++ G + CG LG G   T   S T 
Sbjct: 127 TMDHNTPGMVGGLGNVRAVAVGISHMLALGNDGTVWAWGKNNCGQLGDG---TNVDSMTP 183

Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH--RDTNRPIFRPRLVEALK 214
           +       +V +SA  NH   +  +G V+T G N    CG     TN     P+ V+ L 
Sbjct: 184 VRVSGLPRIVAISAGYNHNLAIDDAGNVWTWGLND---CGQLGDGTNISSPNPKKVKGLA 240

Query: 215 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 274
            V    V  G +F+  L   G +   GSN  G+LG G T D P P  +  L    +V++I
Sbjct: 241 NVTA--VAGGSSFSLALKDDGTIWAWGSNVQGELGVGTTKDCPLPVKVQGLT---NVIRI 295

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-------HDELQPRAIQTFRRKGIHVVR 327
           AAG     A+T +G ++ +        GH EQ        D   PR     R  G+  V+
Sbjct: 296 AAGGETSAAITNDGSLWVW--------GHNEQGKYISGGEDASSPR-----RASGLSNVK 342

Query: 328 -VSAGDEHVVALDSSG 342
            V  G  +++AL++ G
Sbjct: 343 LVDIGTINIIALENDG 358



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 57/187 (30%), Positives = 87/187 (46%), Gaps = 17/187 (9%)

Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
           S   VV V+     +  +L +G V+T G +     G+          R       VP   
Sbjct: 39  SQPSVVDVAEGHGLSVALLDNGTVWTWGHSWHGGLGYESVQDQYVPKR-------VPIYN 91

Query: 221 VTAGLN-FTGFLTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG 277
           VT+  + F     ++  G V T G N +GQLG G T+D  TP  +  L   G+V  +A G
Sbjct: 92  VTSVDSCFASVAALKDDGTVWTWGWNEYGQLGDGTTMDHNTPGMVGGL---GNVRAVAVG 148

Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            S+MLA+  +G V+++G  +   LG G   D + P  +    R    +V +SAG  H +A
Sbjct: 149 ISHMLALGNDGTVWAWGKNNCGQLGDGTNVDSMTPVRVSGLPR----IVAISAGYNHNLA 204

Query: 338 LDSSGYV 344
           +D +G V
Sbjct: 205 IDDAGNV 211



 Score = 43.5 bits (101), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 63/147 (42%), Gaps = 11/147 (7%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L  + ++++ GS++ G LG G  T  C    ++      +V++++A    +A +   G +
Sbjct: 255 LKDDGTIWAWGSNVQGELGVG-TTKDCPLPVKVQ--GLTNVIRIAAGGETSAAITNDGSL 311

Query: 185 FTCGDN--SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
           +  G N    +  G  D + P    R    L  V  K V  G      L   G +   G 
Sbjct: 312 WVWGHNEQGKYISGGEDASSP----RRASGLSNV--KLVDIGTINIIALENDGSLWVVGD 365

Query: 243 NTHGQLGHGDTLDRPTPKSIAPLEEVG 269
           N  GQLG G+T DR  P  +A    VG
Sbjct: 366 NQFGQLGTGNTYDRNMPARVAIGSNVG 392


>gi|119629205|gb|EAX08800.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2, isoform CRA_b [Homo sapiens]
          Length = 310

 Score = 79.0 bits (193), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 95/218 (43%), Gaps = 4/218 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  +F  G++ CG LG G +    +   R++  +   +  +S  S  H       G+VFT
Sbjct: 64  NDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFT 122

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN  +    +   L      +V  G   +  LT  G V   G N  G
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 182

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T+++P P+ +    +   VV IA G    +AV   G VY +G   N  LG G  
Sbjct: 183 QVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNS 242

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            +  QP   +    +GI V RV+ G  H + L   G V
Sbjct: 243 GN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQV 278



 Score = 58.5 bits (140), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 78/153 (50%), Gaps = 6/153 (3%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G YH+L L S+  VF+ G +  G +G G    Q +            VV ++  +
Sbjct: 155 IEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ 214

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
                V+ +G+V+  G N +   G  ++ N+P   P  V AL+G+  ++V  G   T  L
Sbjct: 215 MCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPT--PCRVAALQGIRVQRVACGYAHTLVL 272

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDR--PTPKSI 262
           T  G V+  G+N++GQLG G+  ++  PTP ++
Sbjct: 273 TDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTV 305



 Score = 38.5 bits (88), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 53/116 (45%), Gaps = 3/116 (2%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE-EVGSVVQIAAGPSYMLAVTGNG 288
           + T+   +   G+N  G LG GD      P+ +  L  +  + +   +GP  +LA T  G
Sbjct: 60  YTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATT-EG 118

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            V+++G  +   LG+G  +  L P  I T       V+ V+ G  H + L S G V
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVIEVACGSYHSLVLTSDGEV 173


>gi|224099911|ref|XP_002311672.1| predicted protein [Populus trichocarpa]
 gi|222851492|gb|EEE89039.1| predicted protein [Populus trichocarpa]
          Length = 1109

 Score = 79.0 bits (193), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 58/177 (32%), Positives = 88/177 (49%), Gaps = 7/177 (3%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q+S    H A V + G+VFT G+ S    GH   +     P+LVE+L       V  G
Sbjct: 267 VHQISCGVRHVALVTRQGEVFTWGEESGGRLGHGIEDH-FTHPKLVESLAVTNIDYVACG 325

Query: 225 LNFTGFLTIRGHVHTCG--SNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
              T  ++  G + T G  SN  G LGHG  +    PK ++ PLE +  V+ IA G  + 
Sbjct: 326 EYHTCAISTSGDLFTWGDGSNNSGLLGHGTDVSHWIPKRVSGPLEGL-QVLSIACGTWHS 384

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
              T NG +++FG G+   LGHG++     P+ +Q+    G+  ++V+ G  H  A+
Sbjct: 385 ALATSNGKLFTFGDGTFGALGHGDRKSVSSPKELQSL--NGLKTIKVACGVWHTAAI 439



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 104/234 (44%), Gaps = 26/234 (11%)

Query: 114 MQITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + I  G +H+ L  SN  +F+ G    G LGHG +     S   +   +    ++V+   
Sbjct: 375 LSIACGTWHSALATSNGKLFTFGDGTFGALGHG-DRKSVSSPKELQSLNGLKTIKVACGV 433

Query: 173 NHAAFVL----QSG------QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            H A ++    QSG      ++FT GD      GH + +  +  P  V +L     +Q+ 
Sbjct: 434 WHTAAIVEVMSQSGSNISSRKLFTWGDGDKHRLGHGNKDAYLL-PTCVSSLIDYNFQQLA 492

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL----EEVGSVVQ-IAAG 277
            G   T  LT  GHV T G + +GQLG+      P+     P       VG  V+ I+ G
Sbjct: 493 CGHTMTVALTTSGHVFTMGGSAYGQLGN------PSSNGKIPCLVQDRLVGEFVEEISCG 546

Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
             +   +T    V+++G G+N  LGHG+  D   P  ++  + +  HV  +S G
Sbjct: 547 AYHTAVLTSRSEVFTWGRGANGQLGHGDTEDRKLPTLVEALKER--HVKNLSCG 598



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/147 (25%), Positives = 72/147 (48%), Gaps = 4/147 (2%)

Query: 200 TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP 259
           T   +  P+ +E+   +   Q++ G+     +T +G V T G  + G+LGHG       P
Sbjct: 249 TKNDVLTPKPLESNVVLDVHQISCGVRHVALVTRQGEVFTWGEESGGRLGHGIEDHFTHP 308

Query: 260 KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQT 317
           K +  L  V ++  +A G  +  A++ +G ++++G GSN    LGHG       P+ + +
Sbjct: 309 KLVESL-AVTNIDYVACGEYHTCAISTSGDLFTWGDGSNNSGLLGHGTDVSHWIPKRV-S 366

Query: 318 FRRKGIHVVRVSAGDEHVVALDSSGYV 344
              +G+ V+ ++ G  H     S+G +
Sbjct: 367 GPLEGLQVLSIACGTWHSALATSNGKL 393



 Score = 42.4 bits (98), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 60/127 (47%), Gaps = 9/127 (7%)

Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQ--CVSFTRINFPSAAHVVQVSAS 171
           Q+  G   T+ ++ S  VF+ G S  G LG+     +  C+   R+       V ++S  
Sbjct: 490 QLACGHTMTVALTTSGHVFTMGGSAYGQLGNPSSNGKIPCLVQDRL---VGEFVEEISCG 546

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
             H A +    +VFT G  ++   GH DT +R +  P LVEALK    K ++ G NFT  
Sbjct: 547 AYHTAVLTSRSEVFTWGRGANGQLGHGDTEDRKL--PTLVEALKERHVKNLSCGANFTSS 604

Query: 231 LTIRGHV 237
           + I   V
Sbjct: 605 ICIHKWV 611


>gi|300794901|ref|NP_001179920.1| RCC1 and BTB domain-containing protein 2 [Bos taurus]
 gi|296481887|tpg|DAA24002.1| TPA: regulator of chromosome condensation (RCC1) and BTB (POZ)
           domain containing protein 2 [Bos taurus]
          Length = 527

 Score = 79.0 bits (193), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 94/218 (43%), Gaps = 4/218 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  +F  G++ CG LG G +    +   R++  S   +  +S  S  H       G+VFT
Sbjct: 40  NDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFT 98

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN  +    +   L      +V  G   +  LT  G V   G N  G
Sbjct: 99  WGHNAYSQLGNGTTNAGLVPYHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 158

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T ++P P+ +    +   VV IA G    +AV   G V+ +G   N  LG G  
Sbjct: 159 QVGSGSTANQPIPRRVTGCLQSKVVVNIACGQMCSMAVVNTGEVFVWGYNGNGQLGLGSS 218

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            +  QP   +    +GI V RV+ G  H + L   G V
Sbjct: 219 GN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQV 254



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 99/209 (47%), Gaps = 3/209 (1%)

Query: 118 TGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 177
           +G +  L  +   VF+ G +    LG+G      V +      S   V++V+    H+  
Sbjct: 83  SGPHIVLATTEGEVFTWGHNAYSQLGNGTTNAGLVPYHISTNLSNKQVIEVACGSYHSLV 142

Query: 178 VLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
           +   G+VF  G N+S   G   T N+PI R R+   L+      +  G   +  +   G 
Sbjct: 143 LTSDGEVFAWGYNNSGQVGSGSTANQPIPR-RVTGCLQSKVVVNIACGQMCSMAVVNTGE 201

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           V   G N +GQLG G + ++PTP  +A L+ +  V ++A G ++ L +T  G VY++G+ 
Sbjct: 202 VFVWGYNGNGQLGLGSSGNQPTPCRVAALQGI-RVQRVACGYAHTLVLTDEGQVYAWGAN 260

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
           S   LG G + ++  P  +   + + I +
Sbjct: 261 SYGQLGTGNKSNQSYPTPVVVEKDRIIEI 289



 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 83/177 (46%), Gaps = 5/177 (2%)

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG--VPCKQVTAGLNF 227
           ++ N   +   + ++F  G N   C G  D    I  PR +++L G  + C    +G + 
Sbjct: 29  SASNELLYTTVNDEIFVLGTNCCGCLGLGDVQSTI-EPRRLDSLSGKKIACLSYGSGPHI 87

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
               T  G V T G N + QLG+G T     P  I+       V+++A G  + L +T +
Sbjct: 88  V-LATTEGEVFTWGHNAYSQLGNGTTNAGLVPYHISTNLSNKQVIEVACGSYHSLVLTSD 146

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G V+++G  ++  +G G   ++  PR +    +  + VV ++ G    +A+ ++G V
Sbjct: 147 GEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQSKV-VVNIACGQMCSMAVVNTGEV 202


>gi|37620181|ref|NP_056416.2| probable E3 ubiquitin-protein ligase HERC4 isoform b [Homo sapiens]
 gi|24659293|gb|AAH39600.1| Hect domain and RLD 4 [Homo sapiens]
 gi|119574646|gb|EAW54261.1| hect domain and RLD 4, isoform CRA_b [Homo sapiens]
 gi|119574648|gb|EAW54263.1| hect domain and RLD 4, isoform CRA_b [Homo sapiens]
 gi|325463745|gb|ADZ15643.1| hect domain and RLD 4 [synthetic construct]
          Length = 1049

 Score = 79.0 bits (193), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 107/226 (47%), Gaps = 7/226 (3%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGV 263



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   +        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V +IA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 95/213 (44%), Gaps = 9/213 (4%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           P+ +++    GI  ++V+AG  H   L  SG +
Sbjct: 181 PQLLKSLL--GIPFMQVAAGGAHSFVLTLSGAI 211


>gi|281349737|gb|EFB25321.1| hypothetical protein PANDA_007753 [Ailuropoda melanoleuca]
          Length = 527

 Score = 79.0 bits (193), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 93/218 (42%), Gaps = 4/218 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  +F  G++ CG LG G +    +   R++  S   +  +S  S  H       G+VFT
Sbjct: 40  NDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFT 98

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN  +    +   L      +V  G   +  LT  G V   G N  G
Sbjct: 99  WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSG 158

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T ++P P+ +    +    V IA G    +AV   G VY +G   N  LG G  
Sbjct: 159 QVGSGSTANQPIPRRVTGCLQNKVAVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSS 218

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            +  QP   +    +GI V RV+ G  H + L   G V
Sbjct: 219 GN--QPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQV 254



 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 94/195 (48%), Gaps = 11/195 (5%)

Query: 107 VETSAGNMQITT---GRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA 162
           + T+  N Q+T    G YH+L L S+  VF+ G +  G +G G    Q +          
Sbjct: 121 ISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQN 180

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQV 221
              V ++  +  +  V+ +G+V+  G N +   G   + N+P   P  + AL+G+  ++V
Sbjct: 181 KVAVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPT--PCRIAALQGIRVQRV 238

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS-- 279
             G   T  LT  G V+  G+N++GQLG G+  ++  P  +  + E   +++IAA  S  
Sbjct: 239 ACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPAPV--IVEKDRIIEIAACHSAH 296

Query: 280 YMLAVTGNGVVYSFG 294
              A T  G VY +G
Sbjct: 297 TSAAKTQGGHVYMWG 311



 Score = 38.5 bits (88), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 64/145 (44%), Gaps = 6/145 (4%)

Query: 203 PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 260
           PIF     E L+ +   C   +AG N   + T+   +   G+N  G LG GD      P+
Sbjct: 8   PIFSLCSEEELQLIRQACVFGSAG-NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPR 66

Query: 261 SIAPLE-EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
            +  L  +  + +   +GP  +LA T  G V+++G  +   LG+G  +  L P  I T  
Sbjct: 67  RLDSLSGKKIACLSYGSGPHIVLATT-EGEVFTWGHNAYSQLGNGTTNHGLVPCHIST-N 124

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYV 344
                V  V+ G  H + L S G V
Sbjct: 125 LSNKQVTEVACGSYHSLVLTSDGEV 149


>gi|157137551|ref|XP_001664004.1| Bj1 protein, putative [Aedes aegypti]
 gi|108869687|gb|EAT33912.1| AAEL013819-PA [Aedes aegypti]
          Length = 484

 Score = 79.0 bits (193), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 70/250 (28%), Positives = 107/250 (42%), Gaps = 28/250 (11%)

Query: 122 HTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           H++LI+ +    + G +  G LG   +       T +N      VVQ +   NH  F+  
Sbjct: 126 HSVLITMDRKALAFGRNQHGQLGQS-DLRTFEKPTPVNGLKDVKVVQAACGRNHTLFLTD 184

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           +G V+ CGDN    CG   TN  + +   ++   G P  +V  G  F+  L I G +++ 
Sbjct: 185 NGVVYACGDNRHGQCGVGHTNPTVLKATRLK-YTGPPIVKVACGAEFSMILDINGRLYSF 243

Query: 241 GSNTHGQLGHGD------TLDR------PTPKSIA------------PLEEVGSVVQIAA 276
           G   HGQLGH        T +R        P+ I             P+E+V  ++  A 
Sbjct: 244 GLPEHGQLGHNTDGKYFITANRLAYHYETVPRQIVTYVEKTNEGRTIPIEDV-QILDFAC 302

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
           G ++ +A+      +S+G G    LGH    DE  PR  + F  +   V+RV  G    V
Sbjct: 303 GNNHTVAIDSKNRAFSWGFGGYGRLGHASPQDEWVPRLNKYFDIQKRKVLRVFCGTAFSV 362

Query: 337 ALDSSGYVSL 346
           A+   G V L
Sbjct: 363 AITDVGCVHL 372



 Score = 40.4 bits (93), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 57/260 (21%), Positives = 102/260 (39%), Gaps = 28/260 (10%)

Query: 60  AASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTG 119
           A +  C+ HS+   M R       N+     +  LR  +     + + +     +Q   G
Sbjct: 118 AVTGCCSAHSVLITMDRKALAFGRNQHGQLGQSDLRTFEKPTPVNGLKDVKV--VQAACG 175

Query: 120 RYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           R HTL L  N  V++CG +  G  G G      +  TR+ + +   +V+V+     +  +
Sbjct: 176 RNHTLFLTDNGVVYACGDNRHGQCGVGHTNPTVLKATRLKY-TGPPIVKVACGAEFSMIL 234

Query: 179 LQSGQVFTCGDNSSFCCGHR-DTNRPIFRPRLVEALKGVPCKQVT--------------- 222
             +G++++ G       GH  D    I   RL    + VP + VT               
Sbjct: 235 DINGRLYSFGLPEHGQLGHNTDGKYFITANRLAYHYETVPRQIVTYVEKTNEGRTIPIED 294

Query: 223 -------AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE-EVGSVVQI 274
                   G N T  +  +    + G   +G+LGH    D   P+     + +   V+++
Sbjct: 295 VQILDFACGNNHTVAIDSKNRAFSWGFGGYGRLGHASPQDEWVPRLNKYFDIQKRKVLRV 354

Query: 275 AAGPSYMLAVTGNGVVYSFG 294
             G ++ +A+T  G V+ FG
Sbjct: 355 FCGTAFSVAITDVGCVHLFG 374


>gi|426364912|ref|XP_004049535.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Gorilla gorilla gorilla]
          Length = 1057

 Score = 79.0 bits (193), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 107/226 (47%), Gaps = 7/226 (3%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGV 263



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   +        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V +IA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 95/213 (44%), Gaps = 9/213 (4%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     +  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           P+ +++    GI  ++V+AG  H   L  SG +
Sbjct: 181 PQLLKSLL--GIPFMQVAAGGAHSFVLTLSGAI 211


>gi|426364910|ref|XP_004049534.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Gorilla gorilla gorilla]
          Length = 1049

 Score = 79.0 bits (193), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 107/226 (47%), Gaps = 7/226 (3%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGV 263



 Score = 78.2 bits (191), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   +        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V +IA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 95/213 (44%), Gaps = 9/213 (4%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     +  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           P+ +++    GI  ++V+AG  H   L  SG +
Sbjct: 181 PQLLKSLL--GIPFMQVAAGGAHSFVLTLSGAI 211


>gi|431902378|gb|ELK08879.1| RCC1 and BTB domain-containing protein 2 [Pteropus alecto]
          Length = 621

 Score = 79.0 bits (193), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 94/218 (43%), Gaps = 4/218 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  +F  G++ CG LG G +    +   R++  S   +   S  S  H       G++FT
Sbjct: 134 NDEIFVLGTNCCGCLGLG-DIQSTIEPRRLDSLSGKKIACFSYGSGPHVILATTEGEIFT 192

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN  +    +   L      +V  G   +  LT  G V   G N  G
Sbjct: 193 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 252

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T ++P P+ +    +   VV IA G    +AV  NG VY +G   N  LG G  
Sbjct: 253 QVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSVAVVDNGEVYVWGYNGNGQLGLGSS 312

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            ++  P  I     +GI V RV+ G  H + L   G V
Sbjct: 313 GNQSTPCRIAAL--QGICVQRVACGYAHTLVLTDEGQV 348



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/184 (28%), Positives = 88/184 (47%), Gaps = 6/184 (3%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G YH+L L S+  VF+ G +  G +G G    Q +            VV ++  +
Sbjct: 225 IEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQ 284

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             +  V+ +G+V+  G N +   G   +      P  + AL+G+  ++V  G   T  LT
Sbjct: 285 MCSVAVVDNGEVYVWGYNGNGQLGLGSSGNQ-STPCRIAALQGICVQRVACGYAHTLVLT 343

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS--YMLAVTGNGVV 290
             G V+  G+N++GQLG G+  ++  P  +A   E   +++IAA  S     A T  G V
Sbjct: 344 DEGQVYVWGANSYGQLGTGNKSNQSYPTPVAV--EKDRIIEIAACHSTHTSAAKTQGGHV 401

Query: 291 YSFG 294
           Y +G
Sbjct: 402 YMWG 405


>gi|158259079|dbj|BAF85498.1| unnamed protein product [Homo sapiens]
          Length = 1027

 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 107/226 (47%), Gaps = 7/226 (3%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGV 263



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 64/206 (31%), Positives = 98/206 (47%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   +        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V +IA G  +    V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQHTSTFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 95/213 (44%), Gaps = 9/213 (4%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           P+ +++    GI  ++V+AG  H   L  SG +
Sbjct: 181 PQLLKSLL--GIPFMQVAAGGAHSFVLTLSGAI 211


>gi|427796171|gb|JAA63537.1| Hypothetical protein, partial [Rhipicephalus pulchellus]
          Length = 550

 Score = 78.6 bits (192), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 70/254 (27%), Positives = 107/254 (42%), Gaps = 40/254 (15%)

Query: 122 HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH------VVQVSASENH 174
           HT+L++     F+ G +  G LG      QC    R + P+         VV  +    H
Sbjct: 192 HTVLLTEQGQAFTWGRNDKGQLG------QC-DLKRRDLPTLVETLKDSMVVAAACGRAH 244

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
             F+   G VF CGDN    CG    N  +  P  V A K  P  +V+ G  F+  +  R
Sbjct: 245 TLFLTDHGSVFACGDNKMGQCGVGSQNASVHVPTRV-AFKLRPAVRVSCGGEFSVLVDCR 303

Query: 235 GHVHTCGSNTHGQLGHGDT------------------------LDRPTPKSIAPLEEVGS 270
           GHV+T G   +GQLGH                           +DR     +  +++V  
Sbjct: 304 GHVYTFGCPEYGQLGHNTDGRYFVTSNKLQFKCELVPRRVQVFIDRNREGHVVSVDDV-H 362

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           +V++A+G ++ +A+      +S+G G    LGH E  DE+ PR I+ F      +  V A
Sbjct: 363 IVEVASGLNHTIALDERKRCFSWGFGGYGRLGHNEPKDEMVPRLIKAFEGPNRGLCSVYA 422

Query: 331 GDEHVVALDSSGYV 344
           G    +A+   G +
Sbjct: 423 GGTFSMAVSELGVL 436



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 75/278 (26%), Positives = 106/278 (38%), Gaps = 46/278 (16%)

Query: 97  LQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT- 155
           L+  + S  + +   G     TG   TLL S  + +         +G  P+  Q    + 
Sbjct: 113 LEDGDTSPPVDDAKRGFRVQATGSAGTLLFSGGTNWD-------TIGRRPKDKQKAGASQ 165

Query: 156 --------RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRP 207
                   R+ +P     V    S  H   + + GQ FT G N     G  D  R    P
Sbjct: 166 ERNLWGPHRLAWPHRVKAVFSGCSACHTVLLTEQGQAFTWGRNDKGQLGQCDLKRRDL-P 224

Query: 208 RLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD---TLDRPTPKSIAP 264
            LVE LK         G   T FLT  G V  CG N  GQ G G    ++  PT  +   
Sbjct: 225 TLVETLKDSMVVAAACGRAHTLFLTDHGSVFACGDNKMGQCGVGSQNASVHVPTRVAF-- 282

Query: 265 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD------------ELQP 312
             ++   V+++ G  + + V   G VY+FG      LGH                 EL P
Sbjct: 283 --KLRPAVRVSCGGEFSVLVDCRGHVYTFGCPEYGQLGHNTDGRYFVTSNKLQFKCELVP 340

Query: 313 RAIQTF---RRKG-------IHVVRVSAGDEHVVALDS 340
           R +Q F    R+G       +H+V V++G  H +ALD 
Sbjct: 341 RRVQVFIDRNREGHVVSVDDVHIVEVASGLNHTIALDE 378



 Score = 47.4 bits (111), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 72/306 (23%), Positives = 113/306 (36%), Gaps = 78/306 (25%)

Query: 106 IVETSAGNMQITT--GRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA 162
           +VET   +M +    GR HTL +++  SVF+CG +  G  G G +       TR+ F   
Sbjct: 226 LVETLKDSMVVAAACGRAHTLFLTDHGSVFACGDNKMGQCGVGSQNASVHVPTRVAF-KL 284

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRD-------TNRPIFR----PRLVE 211
              V+VS     +  V   G V+T G       GH         +N+  F+    PR V+
Sbjct: 285 RPAVRVSCGGEFSVLVDCRGHVYTFGCPEYGQLGHNTDGRYFVTSNKLQFKCELVPRRVQ 344

Query: 212 ------------ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP 259
                       ++  V   +V +GLN T  L  R    + G   +G+LGH +  D   P
Sbjct: 345 VFIDRNREGHVVSVDDVHIVEVASGLNHTIALDERKRCFSWGFGGYGRLGHNEPKDEMVP 404

Query: 260 KSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSN-------------------- 298
           + I   E     +  + AG ++ +AV+  GV+Y +G  ++                    
Sbjct: 405 RLIKAFEGPNRGLCSVYAGGTFSMAVSELGVLYFWGMNNHGGEATMYPKPIQDLTGWHIR 464

Query: 299 ----------------------------FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
                                          G G Q     P+ ++    +GIHV  V+ 
Sbjct: 465 GIGCSNKSIVVLADESVISWGPHPTYGELGYGEGRQKSSTTPQEVRLL--EGIHVHAVAC 522

Query: 331 GDEHVV 336
           G  H V
Sbjct: 523 GLGHSV 528


>gi|255585556|ref|XP_002533468.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223526683|gb|EEF28920.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1097

 Score = 78.6 bits (192), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 72/245 (29%), Positives = 113/245 (46%), Gaps = 24/245 (9%)

Query: 116 ITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           I  G +H+ L  SN  +F+ G    GVLGHG    + +SF + +   S    ++V+    
Sbjct: 377 IACGTWHSALATSNGKLFTFGDGAFGVLGHGDR--ESLSFPKEVQLLSGLKTIKVACGVW 434

Query: 174 HAAFVL----QSG------QVFTCGDNSSFCCGH--RDTNRPIFRPRLVEALKGVPCKQV 221
           H A ++    QSG      ++FT GD      GH  +DT      P  V +L      Q+
Sbjct: 435 HTAAIVEVMSQSGANVSSRKLFTWGDGDKNRLGHGSKDT---YLLPTCVSSLIDYNFHQI 491

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSY 280
             G   T  LT  GHV T G   HGQLG+  + D   P ++     VG  V+ ++ G  +
Sbjct: 492 ACGQTLTVALTTSGHVFTMGGTAHGQLGNPAS-DGKMP-TLVQDSLVGEFVEEVSCGAHH 549

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           +  +T    +Y++G G+N  LGHG+  D   P  ++  + +  HV  +S G     ++  
Sbjct: 550 VAVLTSRSELYTWGKGANGRLGHGDTEDRRTPTLVEALKDR--HVKNISCGSNFTTSICI 607

Query: 341 SGYVS 345
             +VS
Sbjct: 608 HKWVS 612



 Score = 70.9 bits (172), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 58/178 (32%), Positives = 86/178 (48%), Gaps = 9/178 (5%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHR-DTNRPIFRPRLVEALKGVPCKQVTA 223
           V Q++    H A V + G+VFT G+ S    GH  +T+     PRLVE L       V  
Sbjct: 267 VQQIACGVRHVALVTRQGEVFTWGEESGGRLGHGFETD--FSCPRLVEFLAVTNVDFVAC 324

Query: 224 GLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSY 280
           G   T  +T  G ++T G  T   G LG G  +    PK ++ PLE +  V  IA G  +
Sbjct: 325 GEYHTCAVTTSGDLYTWGDGTRNAGLLGQGTDVSHWIPKRVSGPLEGL-QVFSIACGTWH 383

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
               T NG +++FG G+   LGHG++     P+ +Q     G+  ++V+ G  H  A+
Sbjct: 384 SALATSNGKLFTFGDGAFGVLGHGDRESLSFPKEVQLL--SGLKTIKVACGVWHTAAI 439



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 38/143 (26%), Positives = 69/143 (48%), Gaps = 4/143 (2%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  P+ +E+   +  +Q+  G+     +T +G V T G  + G+LGHG   D   P+ + 
Sbjct: 253 VLTPKPLESNVVLDVQQIACGVRHVALVTRQGEVFTWGEESGGRLGHGFETDFSCPRLVE 312

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRK 321
            L  V +V  +A G  +  AVT +G +Y++G G+     LG G       P+ + +   +
Sbjct: 313 FL-AVTNVDFVACGEYHTCAVTTSGDLYTWGDGTRNAGLLGQGTDVSHWIPKRV-SGPLE 370

Query: 322 GIHVVRVSAGDEHVVALDSSGYV 344
           G+ V  ++ G  H     S+G +
Sbjct: 371 GLQVFSIACGTWHSALATSNGKL 393


>gi|421871589|ref|ZP_16303210.1| regulator of chromosome condensation family protein [Brevibacillus
           laterosporus GI-9]
 gi|372459473|emb|CCF12759.1| regulator of chromosome condensation family protein [Brevibacillus
           laterosporus GI-9]
          Length = 392

 Score = 78.6 bits (192), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 63/216 (29%), Positives = 101/216 (46%), Gaps = 11/216 (5%)

Query: 129 SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
           S ++  GS   G  G G  + +  + + +     + V+ V    +H   + + G V+T G
Sbjct: 51  SVIYGTGSDANG--GLGSSSVKGKTTSPVPVDDLSDVLMVDTGTSHTVALQKDGTVWTWG 108

Query: 189 DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 248
            ++    G+         P  V+ L  V  KQV AG NFT  L   G V   G N  GQL
Sbjct: 109 WSAYGELGNEKAKSTEKTPHHVKWLSDV--KQVRAGENFTLALKEDGTVWAFGKNRSGQL 166

Query: 249 GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD 308
           G G T  R  P  ++ L +   +V I AG  + LA++ +G V+++G+ S   LG+G +  
Sbjct: 167 GDGTTETRVKPVQVSGLTD---IVAIDAGEEFSLALSEDGTVWAWGNNSVGQLGNGTREK 223

Query: 309 ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            LQP  +         V+ +S G++   A+ S+G V
Sbjct: 224 ALQPVQVSEL----TDVIAISTGEKQGYAVTSNGDV 255



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 60/219 (27%), Positives = 96/219 (43%), Gaps = 16/219 (7%)

Query: 104 SDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA 163
           +DIV   AG        +   L  + +V++ G++  G LG+G   T+  +   +      
Sbjct: 184 TDIVAIDAGE------EFSLALSEDGTVWAWGNNSVGQLGNG---TREKALQPVQVSELT 234

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
            V+ +S  E     V  +G V+  G N         T +    P L++ +  V    V +
Sbjct: 235 DVIAISTGEKQGYAVTSNGDVYGWGYNQGKLG--DGTKKSSNSPVLIDGIYDVIA--VDS 290

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSI--APLEEVGSVVQIAAGPSY 280
           G   T  L   G V   G+NTHGQLG+G  ++   TP  +     E +  +V I AG  +
Sbjct: 291 GKQHTLALKEDGTVWAWGTNTHGQLGYGTPVNYSMTPNQVFLESTEPLNQIVAIDAGGFH 350

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
             A+  +G V+S+G  SN  LG G    ++ P  I+T  
Sbjct: 351 SHAIKKDGTVWSWGFNSNGELGLGHSKKQMYPAKIETIN 389


>gi|356506490|ref|XP_003522014.1| PREDICTED: uncharacterized protein LOC100798841 [Glycine max]
          Length = 1162

 Score = 78.6 bits (192), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 64/198 (32%), Positives = 91/198 (45%), Gaps = 12/198 (6%)

Query: 149 TQCVSFTRINFPSAAH-----VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRP 203
           TQ  S T +  P A       V  ++   +H A   + G VFT G  S    GH   ++ 
Sbjct: 178 TQIPSKTDVLIPKALESNVLDVCHIATGAHHIAIATRQGHVFTWGQESGGRLGH-GIDKD 236

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKS 261
              P LVE L+G   + V  G   T  L+    ++T G  TH  G LGHG       PK 
Sbjct: 237 FSSPVLVEFLEGNNFEFVACGEYHTSALSKSFELYTWGDGTHNVGLLGHGSEASHWIPKM 296

Query: 262 I-APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR 320
           +  PLE +  VV IA G  +    T NG +++FG G+   LGHG+Q     P+ +Q    
Sbjct: 297 VNGPLEGL-QVVSIACGTWHSALATSNGKLFTFGDGAFGVLGHGDQESVWYPKEVQLL-- 353

Query: 321 KGIHVVRVSAGDEHVVAL 338
            G+  ++V+ G  H  A+
Sbjct: 354 TGLKTIKVACGVWHTAAI 371



 Score = 78.2 bits (191), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 103/226 (45%), Gaps = 18/226 (7%)

Query: 114 MQITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + I  G +H+ L  SN  +F+ G    GVLGHG +  + V + + +   +    ++V+  
Sbjct: 307 VSIACGTWHSALATSNGKLFTFGDGAFGVLGHGDQ--ESVWYPKEVQLLTGLKTIKVACG 364

Query: 172 ENHAAFVLQ----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
             H A +++          S ++FT GD      GH +      +P  V  L      QV
Sbjct: 365 VWHTAAIIEVAFQSGSNSSSWKLFTWGDGDMHRLGHGN-KETYLQPTRVAPLMEYNFHQV 423

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAGPSY 280
             G N T  LT  GHV T G   HGQLG+  +L + PT      L E   V +I+ G  +
Sbjct: 424 ECGHNMTIALTTSGHVFTMGGTEHGQLGNPMSLGKIPTLVQDKLLGEF--VEKISCGAHH 481

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
           +  +T    +Y++G G+N  LGHG+  D   P  +   + + I  V
Sbjct: 482 VAILTNKSEIYTWGMGANGRLGHGDVEDRKSPTLVVALKDRNIKNV 527



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 77/171 (45%), Gaps = 15/171 (8%)

Query: 109 TSAGNMQITTGRYHTLLI--------SNSS---VFSCGSSLCGVLGHGPETTQCVSFTRI 157
           T    +++  G +HT  I        SNSS   +F+ G      LGHG + T  +  TR+
Sbjct: 354 TGLKTIKVACGVWHTAAIIEVAFQSGSNSSSWKLFTWGDGDMHRLGHGNKETY-LQPTRV 412

Query: 158 NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV-EALKGV 216
                 +  QV    N    +  SG VFT G       G+  +   I  P LV + L G 
Sbjct: 413 APLMEYNFHQVECGHNMTIALTTSGHVFTMGGTEHGQLGNPMSLGKI--PTLVQDKLLGE 470

Query: 217 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE 267
             ++++ G +    LT +  ++T G   +G+LGHGD  DR +P  +  L++
Sbjct: 471 FVEKISCGAHHVAILTNKSEIYTWGMGANGRLGHGDVEDRKSPTLVVALKD 521


>gi|118349964|ref|XP_001008263.1| Regulator of chromosome condensation [Tetrahymena thermophila]
 gi|89290030|gb|EAR88018.1| Regulator of chromosome condensation [Tetrahymena thermophila
           SB210]
          Length = 2290

 Score = 78.6 bits (192), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 72/272 (26%), Positives = 124/272 (45%), Gaps = 44/272 (16%)

Query: 96  FLQSVEHSSDI-VETSAGNMQITTGRYHTLLISNS-SVFSCGSSL---------CGVLGH 144
           F++S  + ++I  E   G   ++ G +HTL+I++  ++F  G            C +L  
Sbjct: 252 FVRSYVNKTEINEEIKDGIKHVSCGHHHTLVITDQGTIFYFGMGTQGKLFLLRECQLLLQ 311

Query: 145 GPETTQCVSFTRINF-----PSAAHV------VQVSASENHAAFVLQSGQVFTCGDNS-- 191
                Q       NF     P+   V      +QV+   +H+  +  +GQ+FT G N+  
Sbjct: 312 NKSKIQKGQLGNENFVNVYEPTELLVWPKRKFIQVACGSSHSMALTDNGQIFTWGKNTRG 371

Query: 192 SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG 251
               GHR+      +P ++  +  V    + +G   + F++    ++T G+  + +LGHG
Sbjct: 372 QLGQGHRNDQ---LKPTMI--IIEVMATSICSGDQHSAFISDEKELYTWGNGQYFRLGHG 426

Query: 252 DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ 311
            T D   PK +  LE+V  V  ++ G ++ LA+T  G VY++G G +  LG  E +    
Sbjct: 427 VTTDELYPKKVVVLEDV-YVTHVSCGMTHTLAITNEGFVYAWGDGMSGKLGVQENN---- 481

Query: 312 PRAIQTFRRKGIHV-VRVSAGDEHVVALDSSG 342
                    K +H+  RVSAG  H +AL   G
Sbjct: 482 ---------KSLHLPTRVSAGGLHSMALTDQG 504



 Score = 71.2 bits (173), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 68/265 (25%), Positives = 115/265 (43%), Gaps = 36/265 (13%)

Query: 71  YAGMSRNVQIELLNRCN---GNWKRVLR-------FLQSVEHSSDIVETSAGNMQITTGR 120
           Y GM    ++ LL  C     N  ++ +       F+   E +  +V      +Q+  G 
Sbjct: 291 YFGMGTQGKLFLLRECQLLLQNKSKIQKGQLGNENFVNVYEPTELLVWPKRKFIQVACGS 350

Query: 121 YHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
            H++ L  N  +F+ G +  G LG G    Q +  T I     A    + + + H+AF+ 
Sbjct: 351 SHSMALTDNGQIFTWGKNTRGQLGQGHRNDQ-LKPTMIIIEVMA--TSICSGDQHSAFIS 407

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
              +++T G+   F  GH  T   ++ P+ V  L+ V    V+ G+  T  +T  G V+ 
Sbjct: 408 DEKELYTWGNGQYFRLGHGVTTDELY-PKKVVVLEDVYVTHVSCGMTHTLAITNEGFVYA 466

Query: 240 CGSNTHGQLG---HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            G    G+LG   +  +L  PT              +++AG  + +A+T  G++YS+GS 
Sbjct: 467 WGDGMSGKLGVQENNKSLHLPT--------------RVSAGGLHSMALTDQGILYSWGSS 512

Query: 297 SNFCLGHGEQHDELQ----PRAIQT 317
               LG G Q D       P+ I+T
Sbjct: 513 KGGVLGIGFQRDNKDCYSLPQKIRT 537



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 42/125 (33%), Positives = 65/125 (52%), Gaps = 5/125 (4%)

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
           QV  G + +  LT  G + T G NT GQLG G   D+  P  I  + EV +   I +G  
Sbjct: 345 QVACGSSHSMALTDNGQIFTWGKNTRGQLGQGHRNDQLKPTMI--IIEVMA-TSICSGDQ 401

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
           +   ++    +Y++G+G  F LGHG   DEL P+ +     + ++V  VS G  H +A+ 
Sbjct: 402 HSAFISDEKELYTWGNGQYFRLGHGVTTDELYPKKVVVL--EDVYVTHVSCGMTHTLAIT 459

Query: 340 SSGYV 344
           + G+V
Sbjct: 460 NEGFV 464


>gi|242004863|ref|XP_002423296.1| hypothetical protein Phum_PHUM047680 [Pediculus humanus corporis]
 gi|212506298|gb|EEB10558.1| hypothetical protein Phum_PHUM047680 [Pediculus humanus corporis]
          Length = 1229

 Score = 78.6 bits (192), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 75/262 (28%), Positives = 115/262 (43%), Gaps = 24/262 (9%)

Query: 98   QSVEHSSDIVE--TSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
            +++E S  +VE      N  +  G  HT LI N ++++ G ++ G LG GP      + +
Sbjct: 808  KTMESSGTLVELFNKKINSVLNCGYGHTALIRNGTIYTWGQTVKGCLGQGP------TMS 861

Query: 156  RINFPSAA--------HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRP 207
            R + PS           V+ V+  +NH   +  +G V+  G +     G  D     + P
Sbjct: 862  RHSLPSPISLLNCFKLEVLYVACGKNHTTALTNNG-VYAWGCSKYGQLGLGDVYESPY-P 919

Query: 208  RLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE 267
            RL+ +L       ++ G   T  LT +G V   G   HGQLG G+  D+  P  +  L++
Sbjct: 920  RLITSLANENVITLSCGQFHTLALTEKGQVFAWGWGVHGQLGLGNIDDQRLPVCVNHLKD 979

Query: 268  VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV- 326
               +  IAAG  + L ++  G ++SFGSG    LG G       P  IQ    K I +  
Sbjct: 980  -QVIKDIAAGHGHSLVLSDKGQIFSFGSGVFGQLGTGNTTKSSVPVLIQGISEKIILIAT 1038

Query: 327  ----RVSAGDEHVVALDSSGYV 344
                 +S G  H   L  SG V
Sbjct: 1039 GYFHSISCGCHHSALLTVSGGV 1060



 Score = 62.4 bits (150), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 58/216 (26%), Positives = 95/216 (43%), Gaps = 14/216 (6%)

Query: 114  MQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
            + +  G+ HT  ++N+ V++ G S  G LG G +  +      I   +  +V+ +S  + 
Sbjct: 880  LYVACGKNHTTALTNNGVYAWGCSKYGQLGLG-DVYESPYPRLITSLANENVITLSCGQF 938

Query: 174  HAAFVLQSGQVFTCG--DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
            H   + + GQVF  G   +     G+ D  R    P  V  LK    K + AG   +  L
Sbjct: 939  HTLALTEKGQVFAWGWGVHGQLGLGNIDDQR---LPVCVNHLKDQVIKDIAAGHGHSLVL 995

Query: 232  TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE------VGSVVQIAAGPSYMLAVT 285
            + +G + + GS   GQLG G+T     P  I  + E       G    I+ G  +   +T
Sbjct: 996  SDKGQIFSFGSGVFGQLGTGNTTKSSVPVLIQGISEKIILIATGYFHSISCGCHHSALLT 1055

Query: 286  GNGVVYSFGSGSNFCLGHGEQHDELQPRAI--QTFR 319
             +G VY++G   +  LG+G   +   P  I   TF+
Sbjct: 1056 VSGGVYTWGRSLDGQLGNGGHKEVTAPTQINENTFK 1091


>gi|74190775|dbj|BAE28179.1| unnamed protein product [Mus musculus]
          Length = 370

 Score = 78.6 bits (192), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 72/222 (32%), Positives = 103/222 (46%), Gaps = 17/222 (7%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
           +F+ G++  G LG G +    +     +F  A  +  V+    H+A V   G +F CG N
Sbjct: 17  LFAWGANSYGQLGLGHKEDVFLPQQLSDFCQAGCIKSVTGGGGHSAVVTDGGDLFVCGLN 76

Query: 191 SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG- 249
                G   T   + R  + + L+G P +QV  G +FT  LT +G V +CGSN  GQLG 
Sbjct: 77  KDGQLGLGHTEE-VLRFTICKPLRGCPIRQVACGWDFTIMLTEKGQVLSCGSNAFGQLGV 135

Query: 250 -HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG-----SGSNFCLGH 303
            HG       P++I  L E   VV +AAG  + LA T  G V+ +G     SG   C G 
Sbjct: 136 PHGPR-KCVVPQAIECLRE--KVVCVAAGLRHALATTATGSVFQWGTGLASSGRRLCPG- 191

Query: 304 GEQHDELQPRAIQTFRRKGIH---VVRVSAGDEHVVALDSSG 342
             Q+  L   A +  R  G+     V   AG +H  +L  +G
Sbjct: 192 --QNLPLFLTAKEPSRVTGLENSTAVCAVAGSDHSASLTDTG 231



 Score = 51.2 bits (121), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 61/210 (29%), Positives = 89/210 (42%), Gaps = 20/210 (9%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLG--HGPETTQCVSFTRINFPSAAHVVQVSAS 171
           Q+  G   T++++    V SCGS+  G LG  HGP   +CV    I       VV V+A 
Sbjct: 105 QVACGWDFTIMLTEKGQVLSCGSNAFGQLGVPHGPR--KCVVPQAIECLRE-KVVCVAAG 161

Query: 172 ENHAAFVLQSGQVFTCG-----DNSSFCCGHRDTNRPIF----RPRLVEALKGVPCKQVT 222
             HA     +G VF  G          C G    N P+F     P  V  L+        
Sbjct: 162 LRHALATTATGSVFQWGTGLASSGRRLCPGQ---NLPLFLTAKEPSRVTGLENSTAVCAV 218

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYM 281
           AG + +  LT  G ++  G N HGQL     +  P P+ I A   +   V  + +G +++
Sbjct: 219 AGSDHSASLTDTGELYVWGRNKHGQLAS-RAVFLPLPQRIEAHYFQDEKVTAVWSGWTHL 277

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQ 311
           +A T  G V+++G      LG   +  E Q
Sbjct: 278 VAKTETGKVFTWGRADYGQLGRRLEPPEAQ 307


>gi|326496164|dbj|BAJ90703.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 907

 Score = 78.6 bits (192), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 64/223 (28%), Positives = 105/223 (47%), Gaps = 22/223 (9%)

Query: 116 ITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           ++ G +HT LI++   +F+ G    GVLGHG    + +S  R +   S    + V+    
Sbjct: 189 VSCGTWHTALITSMGQLFTFGDGSFGVLGHG--NVKSISCPREVESLSGLKTIAVACGVW 246

Query: 174 HAAFVLQ-----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           H A +++           +G++FT GD      GH D      +P  V +L      +V 
Sbjct: 247 HTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGD-KEARLKPTCVASLIDYDFYRVA 305

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP--TPKSIAPLEEVGSVVQIAAGPSY 280
            G + T  LT  G V T G++ +GQLG+ ++  RP      IA       V+QIA G  +
Sbjct: 306 CGHSLTVGLTTSGKVWTMGNSVYGQLGNPNSDGRPCLVEDKIASEH----VLQIACGSYH 361

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 323
           +  +T    V+++G G+N  LGHG+  D   P  ++  R + +
Sbjct: 362 VAVLTSRSEVFTWGKGANGRLGHGDVEDRKVPTTVEALRDRAV 404



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 57/177 (32%), Positives = 86/177 (48%), Gaps = 7/177 (3%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  V     HA+ V ++G+VFT G++S    GH  T      PRLVE+L       V  G
Sbjct: 79  VYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGH-GTREDSVHPRLVESLAASNIDFVACG 137

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
              T  +T  G ++T G  TH  G LGHG  +    P+ I+ PLE +  +  ++ G  + 
Sbjct: 138 EFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGPLEGL-QIAYVSCGTWHT 196

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             +T  G +++FG GS   LGHG       PR +++    G+  + V+ G  H  A+
Sbjct: 197 ALITSMGQLFTFGDGSFGVLGHGNVKSISCPREVESL--SGLKTIAVACGVWHTAAI 251



 Score = 68.2 bits (165), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 64/246 (26%), Positives = 107/246 (43%), Gaps = 33/246 (13%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSASE 172
           R+ +L+  N  VF+ G    G LGHG       P   + ++ + I+F        V+  E
Sbjct: 87  RHASLVTRNGEVFTWGEDSGGRLGHGTREDSVHPRLVESLAASNIDF--------VACGE 138

Query: 173 NHAAFVLQSGQVFTCGDNSSFC--CGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            H   V  +G+++T GD +      GH  D    I R R+   L+G+    V+ G   T 
Sbjct: 139 FHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPR-RISGPLEGLQIAYVSCGTWHTA 197

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV----- 284
            +T  G + T G  + G LGHG+      P+ +  L  + ++  +A G  +  A+     
Sbjct: 198 LITSMGQLFTFGDGSFGVLGHGNVKSISCPREVESLSGLKTIA-VACGVWHTAAIVEVIV 256

Query: 285 ------TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
                    G ++++G G    LGHG++   L+P  + +      +  RV+ G    V L
Sbjct: 257 TQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDYDFY--RVACGHSLTVGL 314

Query: 339 DSSGYV 344
            +SG V
Sbjct: 315 TTSGKV 320



 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 70/257 (27%), Positives = 115/257 (44%), Gaps = 25/257 (9%)

Query: 106 IVET-SAGNMQ-ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP 160
           +VE+ +A N+  +  G +HT  ++ +     +  G+   G+LGHG +    +   RI+ P
Sbjct: 122 LVESLAASNIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIP-RRISGP 180

Query: 161 -SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 219
                +  VS    H A +   GQ+FT GD S    GH +  + I  PR VE+L G+   
Sbjct: 181 LEGLQIAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGNV-KSISCPREVESLSGLKTI 239

Query: 220 QVTAGLNFTGFLT-----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 268
            V  G+  T  +              G + T G     +LGHGD   R  P  +A L + 
Sbjct: 240 AVACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDY 299

Query: 269 GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKGIHVVR 327
               ++A G S  + +T +G V++ G   N   G  G  + + +P  ++  +    HV++
Sbjct: 300 -DFYRVACGHSLTVGLTTSGKVWTMG---NSVYGQLGNPNSDGRPCLVED-KIASEHVLQ 354

Query: 328 VSAGDEHVVALDSSGYV 344
           ++ G  HV  L S   V
Sbjct: 355 IACGSYHVAVLTSRSEV 371



 Score = 50.8 bits (120), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 78/173 (45%), Gaps = 12/173 (6%)

Query: 182 GQVFTCG----DNSSFCCGH---RDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFLTI 233
           G V+  G    DNS+        R T +  F  P+ +E+   +    V  G+     +T 
Sbjct: 35  GDVYVWGEVVCDNSARTSSDTVIRSTGKTDFLLPKPLESNLVLDVYHVDCGVRHASLVTR 94

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V T G ++ G+LGHG   D   P+ +  L    ++  +A G  +  AVT  G +Y++
Sbjct: 95  NGEVFTWGEDSGGRLGHGTREDSVHPRLVESL-AASNIDFVACGEFHTCAVTTTGELYTW 153

Query: 294 GSGSNFC--LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G G++    LGHG       PR I +   +G+ +  VS G  H   + S G +
Sbjct: 154 GDGTHNVGLLGHGTDVGHWIPRRI-SGPLEGLQIAYVSCGTWHTALITSMGQL 205


>gi|383455292|ref|YP_005369281.1| hypothetical protein COCOR_03305 [Corallococcus coralloides DSM
           2259]
 gi|380729146|gb|AFE05148.1| hypothetical protein COCOR_03305 [Corallococcus coralloides DSM
           2259]
          Length = 744

 Score = 78.6 bits (192), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 73/234 (31%), Positives = 110/234 (47%), Gaps = 16/234 (6%)

Query: 107 VETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV 165
           V+  +G   +  G  H+L L  + SV++ G++  G LG G   T     T         V
Sbjct: 140 VQGLSGVTTVALGATHSLALCYDGSVWAWGANDHGQLGDG---TSIARRTPQMVAGLQEV 196

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAG 224
           V V+A  NH+  VL  G V+  G+N     G   T  R +  P  ++ L G+    V +G
Sbjct: 197 VAVAAGANHSLAVLSDGTVWAWGENYDGQLGDGTTVTRRV--PVPIQGLSGIVA--VASG 252

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
            + +  L   G+V   GSN  GQLG G +L R +P  +    E+  +V +  GP Y +AV
Sbjct: 253 TSHSLALRYDGNVWAWGSNYSGQLGDGSSLSRSSPVQV---TELSGIVSVEGGPDYSMAV 309

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             +G V+++G  +   LG G       P  +QT    G  VV V+AG  H +A+
Sbjct: 310 RYDGTVWTWGINTYGQLGDGTTIARSVP--VQTSGLSG--VVAVAAGRTHALAM 359



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 58/186 (31%), Positives = 86/186 (46%), Gaps = 10/186 (5%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            P  + +V + + ++ +  V   G V+  G N     G   T      P  V+ L GV  
Sbjct: 90  LPGLSGMVSIDSGDDFSMAVRSDGTVWAWGRNDDGQLGD-GTLSTRGDPVQVQGLSGVTT 148

Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
             V  G   +  L   G V   G+N HGQLG G ++ R TP+ +A L+E   VV +AAG 
Sbjct: 149 --VALGATHSLALCYDGSVWAWGANDHGQLGDGTSIARRTPQMVAGLQE---VVAVAAGA 203

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           ++ LAV  +G V+++G   +  LG G       P  IQ        +V V++G  H +AL
Sbjct: 204 NHSLAVLSDGTVWAWGENYDGQLGDGTTVTRRVPVPIQGLS----GIVAVASGTSHSLAL 259

Query: 339 DSSGYV 344
              G V
Sbjct: 260 RYDGNV 265



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/199 (28%), Positives = 93/199 (46%), Gaps = 14/199 (7%)

Query: 122 HTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           H+L + S+  +++ G++  G LG G    +      +      +VV V+A   H+  V  
Sbjct: 403 HSLAVRSDGGLWAWGANNEGQLGDGTTKNRWAPAEVL-----GNVVSVAAGRRHSLAVRD 457

Query: 181 SGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
            G ++  G N+    G    ++R I  P  V  + G+    V AG +++  L     +  
Sbjct: 458 DGSLWAWGSNTVGQLGDGTGSSRTI--PMQVPGISGI--ASVAAGSDYSVALRYDRTLWA 513

Query: 240 CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
            G N++GQLG G T++R  P  +  L     +V IA G  +MLAV  NG V+++G  S+ 
Sbjct: 514 WGENSYGQLGDGTTVNRHVPTRVQGLS---GIVAIATGNGHMLAVRSNGTVWAWGDNSSG 570

Query: 300 CLGHGEQHDELQPRAIQTF 318
            LG G   +   P  +Q  
Sbjct: 571 QLGDGTTINRATPVQVQVL 589



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 64/223 (28%), Positives = 101/223 (45%), Gaps = 27/223 (12%)

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           Y   +  + +V++ G +  G LG G    + V    +     + VV V+A   HA  +  
Sbjct: 305 YSMAVRYDGTVWTWGINTYGQLGDGTTIARSVP---VQTSGLSGVVAVAAGRTHALAMRA 361

Query: 181 SGQVFTCGDNSSFCCGHR-DTNRPI-FRPRLVEALKGVPCKQVTAGLNFTGFLTIR--GH 236
           +  ++  G N     G R D +R + F PR +        + VT        L +R  G 
Sbjct: 362 NNSIWAWGGN---VNGQRGDESRSVYFSPRTIL------NEVVTMAATNDHSLAVRSDGG 412

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           +   G+N  GQLG G T +R      AP E +G+VV +AAG  + LAV  +G ++++GS 
Sbjct: 413 LWAWGANNEGQLGDGTTKNR-----WAPAEVLGNVVSVAAGRRHSLAVRDDGSLWAWGSN 467

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIH-VVRVSAGDEHVVAL 338
           +   LG G       P  +      GI  +  V+AG ++ VAL
Sbjct: 468 TVGQLGDGTGSSRTIPMQV-----PGISGIASVAAGSDYSVAL 505



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 110/234 (47%), Gaps = 22/234 (9%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + +  GR H+L +  + S+++ GS+  G LG G  +++ +    +  P  + +  V+A  
Sbjct: 443 VSVAAGRRHSLAVRDDGSLWAWGSNTVGQLGDGTGSSRTIP---MQVPGISGIASVAAGS 499

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           +++  +     ++  G+NS    G   T NR +  P  V+ L G+       G      L
Sbjct: 500 DYSVALRYDRTLWAWGENSYGQLGDGTTVNRHV--PTRVQGLSGIVAIATGNGH----ML 553

Query: 232 TIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
            +R  G V   G N+ GQLG G T++R TP  +  L  + +V   AA   + LAV  +G 
Sbjct: 554 AVRSNGTVWAWGDNSSGQLGDGTTINRATPVQVQVLSGIVAVAAGAA---HSLAVRYDGT 610

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-HVVRVSAGDEHVVALDSSG 342
           ++++G  +   LG G     L P  +Q     GI   V VSA   H +A+ + G
Sbjct: 611 LWAWGINNTSQLGDGTGIPRLVPTQVQ-----GIGSAVAVSAAKHHSLAVLADG 659



 Score = 38.9 bits (89), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 49/99 (49%), Gaps = 7/99 (7%)

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCG-HRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V VSA+++H+  VL  G ++  G N+    G ++D   P   P  V  L GV     T G
Sbjct: 643 VAVSAAKHHSLAVLADGTLWDWGANNYGQLGRNQDNTNPT--PSKVTTLTGVTEAVGTFG 700

Query: 225 --LNFTGFLTIR--GHVHTCGSNTHGQLGHGDTLDRPTP 259
             + F   L +R  G++   G NT+GQLG G   + P P
Sbjct: 701 YSIGFGHSLALRSDGYLVGWGHNTYGQLGTGVPENIPVP 739


>gi|325180681|emb|CCA15086.1| RCC1 and BTB domaincontaining protein putative [Albugo laibachii
           Nc14]
          Length = 554

 Score = 78.6 bits (192), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 115/252 (45%), Gaps = 10/252 (3%)

Query: 97  LQSVEHSSDIVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFT 155
           +QS+     +V     +++   G  H   IS S ++++ G +  G LGHG  T    + T
Sbjct: 84  VQSLRLVPALVTEDIAHIRSANGCEHLTAISRSGALYTFGFNSRGQLGHG-STNPITTPT 142

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALK 214
           +I   ++ HVV+V+ S  H   +   G ++  G N     G  D  +R +  P  +    
Sbjct: 143 KIKDLASYHVVEVACSYFHTIVMTMEGTLYAFGRNDLGQLGIDDGMDRHV--PVPLTYFN 200

Query: 215 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI--APLEEVGSVV 272
             P   V  G + T      G V   G N HGQLG G TLD     S+  APL+ +  V 
Sbjct: 201 SRPVLAVACGQHHTVVSLTNGGVVAFGKNDHGQLGTGYTLDYHASPSLLAAPLDSL-VVP 259

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
            +A G  + +A+  +G VYSFG      LGHG +H   +P  I+   +   H V+V+ G 
Sbjct: 260 SLACGYYHTIALAEHGSVYSFGRNDYGQLGHGHRHHLSEPTLIKALAKT--HAVQVTCGC 317

Query: 333 EHVVALDSSGYV 344
            H + L   G V
Sbjct: 318 YHTLVLSEDGKV 329



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 66/218 (30%), Positives = 102/218 (46%), Gaps = 8/218 (3%)

Query: 132 FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNS 191
           +S G +  G L H     + +  T I+F     ++ V+      AF+ ++G VFTCG N 
Sbjct: 14  YSFGQNSYGELCHNDTVDRTLP-TPISFCHNVKILDVACGNEQTAFLFETGDVFTCGYND 72

Query: 192 SFCCGHRDTNRPIFRPRLVEAL--KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
           S  CG   T+R +   RLV AL  + +   +   G      ++  G ++T G N+ GQLG
Sbjct: 73  SGQCGIGSTSR-VQSLRLVPALVTEDIAHIRSANGCEHLTAISRSGALYTFGFNSRGQLG 131

Query: 250 HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE 309
           HG T    TP  I  L     VV++A    + + +T  G +Y+FG      LG  +  D 
Sbjct: 132 HGSTNPITTPTKIKDLASY-HVVEVACSYFHTIVMTMEGTLYAFGRNDLGQLGIDDGMDR 190

Query: 310 LQPRAIQTFRRKGIHVVRVSAGDEH-VVALDSSGYVSL 346
             P  +  F  +   V+ V+ G  H VV+L + G V+ 
Sbjct: 191 HVPVPLTYFNSRP--VLAVACGQHHTVVSLTNGGVVAF 226



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 62/230 (26%), Positives = 104/230 (45%), Gaps = 6/230 (2%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++    +HT++++   ++++ G +  G LG      + V      F S   V+ V+  +
Sbjct: 153 VEVACSYFHTIVMTMEGTLYAFGRNDLGQLGIDDGMDRHVPVPLTYFNSRP-VLAVACGQ 211

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGFL 231
           +H    L +G V   G N     G   T      P L+ A L  +    +  G   T  L
Sbjct: 212 HHTVVSLTNGGVVAFGKNDHGQLGTGYTLDYHASPSLLAAPLDSLVVPSLACGYYHTIAL 271

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
              G V++ G N +GQLGHG       P  I  L +  +V Q+  G  + L ++ +G VY
Sbjct: 272 AEHGSVYSFGRNDYGQLGHGHRHHLSEPTLIKALAKTHAV-QVTCGCYHTLVLSEDGKVY 330

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
            FG  ++  LG G   D   P+ I + R K   VV+V++G  H + L ++
Sbjct: 331 PFGRNNHGQLGLGNLIDCTSPQIIASLRDK--FVVKVASGFYHSICLTAT 378



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 57/196 (29%), Positives = 92/196 (46%), Gaps = 6/196 (3%)

Query: 114 MQITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV-QVSAS 171
           + +  G++HT++ ++N  V + G +  G LG G       S + +  P  + VV  ++  
Sbjct: 205 LAVACGQHHTVVSLTNGGVVAFGKNDHGQLGTGYTLDYHASPSLLAAPLDSLVVPSLACG 264

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   + + G V++ G N     GH   +  +  P L++AL      QVT G   T  L
Sbjct: 265 YYHTIALAEHGSVYSFGRNDYGQLGHGHRHH-LSEPTLIKALAKTHAVQVTCGCYHTLVL 323

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG--PSYMLAVTGNGV 289
           +  G V+  G N HGQLG G+ +D  +P+ IA L +   VV++A+G   S  L  T N V
Sbjct: 324 SEDGKVYPFGRNNHGQLGLGNLIDCTSPQIIASLRD-KFVVKVASGFYHSICLTATKNSV 382

Query: 290 VYSFGSGSNFCLGHGE 305
                +    C   G+
Sbjct: 383 GSRMDTSHTLCQDLGK 398


>gi|440796629|gb|ELR17738.1| ubiquitin ligase, putative [Acanthamoeba castellanii str. Neff]
          Length = 1287

 Score = 78.6 bits (192), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 71/255 (27%), Positives = 114/255 (44%), Gaps = 35/255 (13%)

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           Y  +      + S G++  GVLGH     Q      I   S+  V  V+A E H+  + +
Sbjct: 559 YKNIKEQTGLILSWGANSDGVLGHTGGIEQLWPLA-IESLSSVQVKMVAAGEFHSLCLTE 617

Query: 181 SGQVFTCGDNSSFCCGHRDTN-------RPIFRPR---LVEALKGVPCKQVTAGLNFTGF 230
           +G+V + G N    CG   T          + RPR   L + L+      + AG   +  
Sbjct: 618 NGEVTSFGLNDQGQCGQPITKIAESSDLAAVARPRPIVLPDDLRKKTVVSIAAGGYHSAL 677

Query: 231 LTIRGHVHTCGSNTHGQLGH---------GDTLD-----------RPTPKSIAPLEEVGS 270
           +T  G ++T G     QLGH         G+ L            +P P  ++ L   G 
Sbjct: 678 VTADGELYTFGRGGEFQLGHDTVMALGEGGNALHYRSNSAQTSYFQPKPTRLSALN--GQ 735

Query: 271 VV-QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
           VV Q+A G  +   VT  G +Y++G G+N  LGHG+  D+  P+ ++   +  I +V+V+
Sbjct: 736 VVKQVACGRFHSACVTEEGALYTWGRGANGQLGHGDMTDQATPKRVEAGIKDKI-MVKVA 794

Query: 330 AGDEHVVALDSSGYV 344
            G+ H  A+DS+G +
Sbjct: 795 CGENHSAAVDSAGVI 809



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 64/222 (28%), Positives = 98/222 (44%), Gaps = 32/222 (14%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHG----PETTQCVSFTR---INFPS---AAH 164
           +  G +H+L L  N  V S G +  G  G       E++   +  R   I  P       
Sbjct: 605 VAAGEFHSLCLTENGEVTSFGLNDQGQCGQPITKIAESSDLAAVARPRPIVLPDDLRKKT 664

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT------------------NRPIFR 206
           VV ++A   H+A V   G+++T G    F  GH DT                      F+
Sbjct: 665 VVSIAAGGYHSALVTADGELYTFGRGGEFQLGH-DTVMALGEGGNALHYRSNSAQTSYFQ 723

Query: 207 PR--LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
           P+   + AL G   KQV  G   +  +T  G ++T G   +GQLGHGD  D+ TPK +  
Sbjct: 724 PKPTRLSALNGQVVKQVACGRFHSACVTEEGALYTWGRGANGQLGHGDMTDQATPKRVEA 783

Query: 265 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
             +   +V++A G ++  AV   GV+Y+ G   +  LG G++
Sbjct: 784 GIKDKIMVKVACGENHSAAVDSAGVIYTTGGDESGQLGKGDE 825



 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 66/252 (26%), Positives = 105/252 (41%), Gaps = 34/252 (13%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+  GR+H+  ++   ++++ G    G LGHG  T Q              +V+V+  EN
Sbjct: 739 QVACGRFHSACVTEEGALYTWGRGANGQLGHGDMTDQATPKRVEAGIKDKIMVKVACGEN 798

Query: 174 HAAFVLQSGQVFTCGDNSS---------FCCGHRD----------TNRPIFRPRLVEALK 214
           H+A V  +G ++T G + S          C  H +             P F   L  +++
Sbjct: 799 HSAAVDSAGVIYTTGGDESGQLGKGDEWICATHGEGCTGSGWSCQERIPTFLSIL--SVR 856

Query: 215 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 274
            V    +  G  F   +T RG ++T G  T   LG    +  PT      L  +  VV +
Sbjct: 857 HVQFVDIACGHGFCAAITNRGLLYTWGKGTALGLGPSGDVSEPTH-----LSSIDGVVSV 911

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL--QPRAIQTFRRKGIHVVR---VS 329
           A G  +  A+T  G +Y +GS     LG G   + +   P+ +  F    IH  R   VS
Sbjct: 912 ACGDIHAAALTDKGQLYMWGSSEAGRLGDGRSTEGVTRTPKLVPAF--ADIHQARCLGVS 969

Query: 330 AGDEHVVALDSS 341
            G  H +A+ S+
Sbjct: 970 IGPRHALAISST 981



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 70/269 (26%), Positives = 107/269 (39%), Gaps = 45/269 (16%)

Query: 116 ITTGRYHTLLIS---------NSSVFSCGSSLCGVLGHG-------PETTQCVSF----T 155
           I  G YH+ L++             F  G      LG G         + Q   F    T
Sbjct: 668 IAAGGYHSALVTADGELYTFGRGGEFQLGHDTVMALGEGGNALHYRSNSAQTSYFQPKPT 727

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           R++  +   V QV+    H+A V + G ++T G  ++   GH D        R+   +K 
Sbjct: 728 RLSALNGQVVKQVACGRFHSACVTEEGALYTWGRGANGQLGHGDMTDQATPKRVEAGIKD 787

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTL-----------------DR-P 257
               +V  G N +  +   G ++T G +  GQLG GD                   +R P
Sbjct: 788 KIMVKVACGENHSAAVDSAGVIYTTGGDESGQLGKGDEWICATHGEGCTGSGWSCQERIP 847

Query: 258 TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQT 317
           T  SI  +  V   V IA G  +  A+T  G++Y++G G+   LG G   D  +P  + +
Sbjct: 848 TFLSILSVRHV-QFVDIACGHGFCAAITNRGLLYTWGKGT--ALGLGPSGDVSEPTHLSS 904

Query: 318 FRRKGIHVVRVSAGDEHVVALDSSGYVSL 346
                  VV V+ GD H  AL   G + +
Sbjct: 905 ID----GVVSVACGDIHAAALTDKGQLYM 929


>gi|357506539|ref|XP_003623558.1| Chromosome condensation regulator-like protein [Medicago
           truncatula]
 gi|355498573|gb|AES79776.1| Chromosome condensation regulator-like protein [Medicago
           truncatula]
          Length = 1108

 Score = 78.6 bits (192), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 60/196 (30%), Positives = 92/196 (46%), Gaps = 7/196 (3%)

Query: 146 PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF 205
           P TT  +    +       V Q+++   H A V + G+VFT G+ S    GH   ++   
Sbjct: 247 PSTTDVLVPKPLESSVVLDVHQIASGVRHMALVTRQGEVFTWGEESGGRLGH-GIDKDFG 305

Query: 206 RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI- 262
           RP+LVE L     + V  G N T  ++I   + + G   +  G LGHG  +    PK I 
Sbjct: 306 RPQLVEFLAVTNVESVACGENHTCAVSISDELFSWGDGKYNVGLLGHGTDVSHWVPKRIN 365

Query: 263 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
            PLE +  V+ IA G  +    T NG +++FG G+   LGHG +     P+ +Q     G
Sbjct: 366 GPLEGL-QVISIACGTWHSALATSNGKLFTFGDGTFGVLGHGNRESVAYPKEVQLL--SG 422

Query: 323 IHVVRVSAGDEHVVAL 338
           +  + V+ G  H  A+
Sbjct: 423 LKTITVACGVWHTAAI 438



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 104/230 (45%), Gaps = 18/230 (7%)

Query: 114 MQITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + I  G +H+ L  SN  +F+ G    GVLGHG    + V++ + +   S    + V+  
Sbjct: 374 ISIACGTWHSALATSNGKLFTFGDGTFGVLGHG--NRESVAYPKEVQLLSGLKTITVACG 431

Query: 172 ENHAAFVL----QSG------QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
             H A ++    QSG      ++FT GD   +  GH +      +P  V  L      Q+
Sbjct: 432 VWHTAAIVEVTFQSGSNVSSRKLFTWGDGDKYRLGHGNKET-YLQPTCVSTLIEYNFHQI 490

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
             G   T  LT  GH+ T G    GQLG+  + D   P  +        V +I+ G  ++
Sbjct: 491 ACGHTMTIALTTSGHLFTMGGTEFGQLGNSLS-DGKIPILVQDALVGEFVEEISCGAHHV 549

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
            A+T    +Y++G G+N  LGHG+  D   P  ++  + +  HV  +S G
Sbjct: 550 AALTSRSELYTWGKGANGRLGHGDIDDRKSPTLVEALKER--HVKNISCG 597



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 66/246 (26%), Positives = 108/246 (43%), Gaps = 23/246 (9%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSA 170
           QI +G  H  L++    VF+ G    G LGHG +      F R   + F +  +V  V+ 
Sbjct: 268 QIASGVRHMALVTRQGEVFTWGEESGGRLGHGIDK----DFGRPQLVEFLAVTNVESVAC 323

Query: 171 SENHAAFVLQSGQVFTCGDNSSFC--CGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
            ENH   V  S ++F+ GD        GH          R+   L+G+    +  G   +
Sbjct: 324 GENHTCAVSISDELFSWGDGKYNVGLLGHGTDVSHWVPKRINGPLEGLQVISIACGTWHS 383

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV---- 284
              T  G + T G  T G LGHG+      PK +  L  + ++  +A G  +  A+    
Sbjct: 384 ALATSNGKLFTFGDGTFGVLGHGNRESVAYPKEVQLLSGLKTIT-VACGVWHTAAIVEVT 442

Query: 285 --TGNGV----VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             +G+ V    ++++G G  + LGHG +   LQP  + T      H  +++ G    +AL
Sbjct: 443 FQSGSNVSSRKLFTWGDGDKYRLGHGNKETYLQPTCVSTLIEYNFH--QIACGHTMTIAL 500

Query: 339 DSSGYV 344
            +SG++
Sbjct: 501 TTSGHL 506



 Score = 47.8 bits (112), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 48/160 (30%), Positives = 77/160 (48%), Gaps = 13/160 (8%)

Query: 126 ISNSSVFSCGSSLCGVLGHGPETT----QCVSFTRINFPSAAHVVQVSASENHAAFVLQS 181
           +S+  +F+ G      LGHG + T     CVS T I +    +  Q++        +  S
Sbjct: 449 VSSRKLFTWGDGDKYRLGHGNKETYLQPTCVS-TLIEY----NFHQIACGHTMTIALTTS 503

Query: 182 GQVFTCGDNSSFCCGHRDTNRPIFRPRLV-EALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           G +FT G       G+  ++  I  P LV +AL G   ++++ G +    LT R  ++T 
Sbjct: 504 GHLFTMGGTEFGQLGNSLSDGKI--PILVQDALVGEFVEEISCGAHHVAALTSRSELYTW 561

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           G   +G+LGHGD  DR +P  +  L+E   V  I+ G S+
Sbjct: 562 GKGANGRLGHGDIDDRKSPTLVEALKER-HVKNISCGSSF 600


>gi|195014693|ref|XP_001984062.1| GH15214 [Drosophila grimshawi]
 gi|193897544|gb|EDV96410.1| GH15214 [Drosophila grimshawi]
          Length = 1052

 Score = 78.6 bits (192), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 75/253 (29%), Positives = 111/253 (43%), Gaps = 42/253 (16%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHG---------PETTQCVSFTRINFPSAAH 164
           QI  G  HTL ++ S  V++CGS+    LGH          PE   CV            
Sbjct: 40  QIACGHRHTLFLTASGKVYACGSNDYAQLGHELSSKRPLQIPELVDCV------------ 87

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           + Q++    H+  + + GQV + GDN     GH      +  P+ V AL      Q+  G
Sbjct: 88  ITQIACGSRHSMALTEWGQVLSWGDNECGQLGHASDQDVVQLPKTVRALVSKTVVQIACG 147

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI----APL---EEVGSVVQ-IAA 276
            N +  LT  G ++  GSN +GQLG        TP  +    AP+     +G  V+ IA 
Sbjct: 148 NNHSLALTCCGELYAWGSNIYGQLG------VKTPSELGQCNAPMLLTTLLGIPVRAIAC 201

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 334
           G ++   ++ +  V  FG G N C  LG  ++ +   P  ++T R  G+    V+ GDE 
Sbjct: 202 GGNHSFLISKSSAV--FGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRF--VACGDEF 257

Query: 335 VVALDSSGYVSLC 347
            V L + G V  C
Sbjct: 258 SVFLTNEGGVFTC 270



 Score = 77.4 bits (189), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 104/227 (45%), Gaps = 6/227 (2%)

Query: 115 QITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI  G  H++ ++    V S G + CG LGH  +         +    +  VVQ++   N
Sbjct: 90  QIACGSRHSMALTEWGQVLSWGDNECGQLGHASDQDVVQLPKTVRALVSKTVVQIACGNN 149

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNR--PIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           H+  +   G+++  G N     G +  +       P L+  L G+P + +  G N +  +
Sbjct: 150 HSLALTCCGELYAWGSNIYGQLGVKTPSELGQCNAPMLLTTLLGIPVRAIACGGNHSFLI 209

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           +    V   G N  GQLG  D  +R  P  +  L  +G V  +A G  + + +T  G V+
Sbjct: 210 SKSSAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLG-VRFVACGDEFSVFLTNEGGVF 268

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           + G+G+   LGHG   +E+ PR +      G  + +V+ G+ H +A+
Sbjct: 269 TCGAGAYGQLGHGFCGNEMLPRMVMELM--GSTISQVACGNRHTLAM 313



 Score = 71.2 bits (173), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 65/195 (33%), Positives = 98/195 (50%), Gaps = 10/195 (5%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLG-HGP-ETTQCVSFTRINFPSAAHVVQVSA 170
           +QI  G  H+L L     +++ GS++ G LG   P E  QC +   +       V  ++ 
Sbjct: 142 VQIACGNNHSLALTCCGELYAWGSNIYGQLGVKTPSELGQCNAPMLLTTLLGIPVRAIAC 201

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
             NH+  + +S  VF  G N+    G  D TNR    P  ++ L+ +  + V  G  F+ 
Sbjct: 202 GGNHSFLISKSSAVFGWGRNNCGQLGLNDETNRAY--PTQLKTLRTLGVRFVACGDEFSV 259

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGN 287
           FLT  G V TCG+  +GQLGHG   +   P+ +  +E +GS + Q+A G  + LA V   
Sbjct: 260 FLTNEGGVFTCGAGAYGQLGHGFCGNEMLPRMV--MELMGSTISQVACGNRHTLAMVPAR 317

Query: 288 GVVYSFGSGSNFCLG 302
           G +Y FG GS+  LG
Sbjct: 318 GRIYGFGLGSSGQLG 332



 Score = 71.2 bits (173), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 54/169 (31%), Positives = 86/169 (50%), Gaps = 8/169 (4%)

Query: 130 SVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
            ++  G++  G LG G  E  Q ++ +++ +   + V Q++    H  F+  SG+V+ CG
Sbjct: 2   ELYCWGNASHGQLGLGGIEDEQILTPSKMPWQPDSAVNQIACGHRHTLFLTASGKVYACG 61

Query: 189 DNSSFCCGHR-DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
            N     GH   + RP+  P LV+ +      Q+  G   +  LT  G V + G N  GQ
Sbjct: 62  SNDYAQLGHELSSKRPLQIPELVDCV----ITQIACGSRHSMALTEWGQVLSWGDNECGQ 117

Query: 248 LGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
           LGH    D    PK++  L    +VVQIA G ++ LA+T  G +Y++GS
Sbjct: 118 LGHASDQDVVQLPKTVRALVS-KTVVQIACGNNHSLALTCCGELYAWGS 165



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 66/149 (44%), Gaps = 4/149 (2%)

Query: 116 ITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G  H+ LIS SS VF  G + CG LG   ET +    T++       V  V+  +  
Sbjct: 199 IACGGNHSFLISKSSAVFGWGRNNCGQLGLNDETNRAYP-TQLKTLRTLGVRFVACGDEF 257

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFLTI 233
           + F+   G VFTCG  +    GH      +  PR+V  L G    QV  G   T   +  
Sbjct: 258 SVFLTNEGGVFTCGAGAYGQLGHGFCGNEML-PRMVMELMGSTISQVACGNRHTLAMVPA 316

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           RG ++  G  + GQLG  +T     P+ +
Sbjct: 317 RGRIYGFGLGSSGQLGTRNTKSLNLPQMV 345


>gi|66801165|ref|XP_629508.1| regulator of chromosome condensation  domain-containing protein
           [Dictyostelium discoideum AX4]
 gi|60462899|gb|EAL61096.1| regulator of chromosome condensation  domain-containing protein
           [Dictyostelium discoideum AX4]
          Length = 455

 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 74/263 (28%), Positives = 116/263 (44%), Gaps = 34/263 (12%)

Query: 115 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           ++  GR  TL+++ +  V   G +  G LG G +T    + T +   +  H++ +    +
Sbjct: 145 KVIGGRSFTLVLTRDGKVLGFGENNFGQLGLG-DTRNRTAPTPVETLNNQHIIDIGVGLD 203

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGH--------------------------RDTNRPIFR- 206
           H+  V ++G VF  G N     G                           R+   P    
Sbjct: 204 HSIAVTKAGHVFGWGYNVEGQIGQKVVEYTRMNSTTEVMDGEEEGGAGSLREQMIPDVEY 263

Query: 207 --PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD-RPT-PKSI 262
             P LV  L+ +    V  G + T  L+ RG+V++ GSN  G LG G  L  R T P  I
Sbjct: 264 TLPTLVPGLEQIKISNVFCGYDSTFLLSARGNVYSFGSNEIGTLGLGSELKGRVTKPTKI 323

Query: 263 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRRK 321
              E    + Q+++G S+ L +T  G VYS G G+   LG G +  +   P  ++ F + 
Sbjct: 324 KFTETNEKIKQLSSGASHTLFLTSGGNVYSCGWGTEGRLGLGMDTSNRDSPTLLKYFNQN 383

Query: 322 GIHVVRVSAGDEHVVALDSSGYV 344
            I +V+V+AG  H +ALD  G V
Sbjct: 384 KIKIVKVAAGGSHSMALDDQGRV 406



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/123 (37%), Positives = 75/123 (60%), Gaps = 4/123 (3%)

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVG-SVVQIA 275
            KQ+++G + T FLT  G+V++CG  T G+LG G DT +R +P  +    +    +V++A
Sbjct: 332 IKQLSSGASHTLFLTSGGNVYSCGWGTEGRLGLGMDTSNRDSPTLLKYFNQNKIKIVKVA 391

Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           AG S+ +A+   G VY++G+GSN  LGHG + DE  P+ I  F     +V+ + AG ++ 
Sbjct: 392 AGGSHSMALDDQGRVYTWGNGSNGKLGHGNESDENLPKQINFFSHS--NVIDIFAGIDNS 449

Query: 336 VAL 338
           + L
Sbjct: 450 LVL 452



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/160 (31%), Positives = 80/160 (50%), Gaps = 9/160 (5%)

Query: 124 LLISNSSVFSCGSSLCGVLGHGPETTQCVSF-TRINF-PSAAHVVQVSASENHAAFVLQS 181
           LL +  +V+S GS+  G LG G E    V+  T+I F  +   + Q+S+  +H  F+   
Sbjct: 289 LLSARGNVYSFGSNEIGTLGLGSELKGRVTKPTKIKFTETNEKIKQLSSGASHTLFLTSG 348

Query: 182 GQVFTCGDNSS--FCCGHRDTNRPIFRPRLVEALKGVPCK--QVTAGLNFTGFLTIRGHV 237
           G V++CG  +      G   +NR    P L++       K  +V AG + +  L  +G V
Sbjct: 349 GNVYSCGWGTEGRLGLGMDTSNRD--SPTLLKYFNQNKIKIVKVAAGGSHSMALDDQGRV 406

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG 277
           +T G+ ++G+LGHG+  D   PK I       +V+ I AG
Sbjct: 407 YTWGNGSNGKLGHGNESDENLPKQINFFSH-SNVIDIFAG 445



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/117 (33%), Positives = 58/117 (49%), Gaps = 9/117 (7%)

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
           S +V+  G N S   G+       +R P  ++ LK    ++V  G +FT  LT  G V  
Sbjct: 108 SNKVYMWGTNKS---GNMSLPSEQYRFPTTIDLLKNTFVEKVIGGRSFTLVLTRDGKVLG 164

Query: 240 CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS--VVQIAAGPSYMLAVTGNGVVYSFG 294
            G N  GQLG GDT +R  P    P+E + +  ++ I  G  + +AVT  G V+ +G
Sbjct: 165 FGENNFGQLGLGDTRNRTAP---TPVETLNNQHIIDIGVGLDHSIAVTKAGHVFGWG 218



 Score = 46.6 bits (109), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 55/102 (53%), Gaps = 6/102 (5%)

Query: 108 ETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINF--PSAAH 164
           ET+    Q+++G  HTL L S  +V+SCG    G LG G +T+   S T + +   +   
Sbjct: 327 ETNEKIKQLSSGASHTLFLTSGGNVYSCGWGTEGRLGLGMDTSNRDSPTLLKYFNQNKIK 386

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRP 203
           +V+V+A  +H+  +   G+V+T G+ S+   GH    D N P
Sbjct: 387 IVKVAAGGSHSMALDDQGRVYTWGNGSNGKLGHGNESDENLP 428



 Score = 43.1 bits (100), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 30/113 (26%), Positives = 54/113 (47%), Gaps = 4/113 (3%)

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           TI   V+  G+N  G +       R  P +I  L+    V ++  G S+ L +T +G V 
Sbjct: 106 TISNKVYMWGTNKSGNMSLPSEQYR-FPTTIDLLKNT-FVEKVIGGRSFTLVLTRDGKVL 163

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            FG  +   LG G+  +   P  ++T   +  H++ +  G +H +A+  +G+V
Sbjct: 164 GFGENNFGQLGLGDTRNRTAPTPVETLNNQ--HIIDIGVGLDHSIAVTKAGHV 214


>gi|390352695|ref|XP_003727958.1| PREDICTED: uncharacterized protein LOC100887866 [Strongylocentrotus
           purpuratus]
          Length = 1139

 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 73/240 (30%), Positives = 107/240 (44%), Gaps = 31/240 (12%)

Query: 116 ITTGRYHTLLISNSSVFSCGSSLCGVLGHG----------PETTQCVSFTRINFPSAAHV 165
           +  G+ H  +++N  V++ G +  G LG G          P   + +    I      HV
Sbjct: 777 LACGQDHAAIVANGDVYTWGRAHEGRLGQGDIMSLDGRAPPLRVETLHMHGI------HV 830

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
             V+  + H   V Q G++++ G +S    G  D N    RP  VEAL G  C  V  G 
Sbjct: 831 RAVACGKEHTMAVTQEGKLYSWGSSSYGQLGVGDRNVH-SRPVAVEALSGQRCLSVACGQ 889

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
             T  LT    + + G   HGQLGHGD  D+  PK +  L +  ++V I+AG ++  A+T
Sbjct: 890 LHTLVLTQDQRLWSFGWGVHGQLGHGDVEDQILPKLVNQLSKC-AIVGISAGYAHSGALT 948

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVS 345
            +G V+ FGS S   LG G       P             VR+ A   H V++ + GY S
Sbjct: 949 NDGQVWMFGSSSFGQLGTGSIGKSTVP-------------VRLKALSSHHVSILTCGYYS 995



 Score = 47.0 bits (110), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 59/127 (46%), Gaps = 6/127 (4%)

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD---RPTPKSIAPLEEVG-SV 271
           +P + V A       +   G V+T G    G+LG GD +    R  P  +  L   G  V
Sbjct: 771 LPTQNVLACGQDHAAIVANGDVYTWGRAHEGRLGQGDIMSLDGRAPPLRVETLHMHGIHV 830

Query: 272 VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
             +A G  + +AVT  G +YS+GS S   LG G+++   +P A++     G   + V+ G
Sbjct: 831 RAVACGKEHTMAVTQEGKLYSWGSSSYGQLGVGDRNVHSRPVAVEAL--SGQRCLSVACG 888

Query: 332 DEHVVAL 338
             H + L
Sbjct: 889 QLHTLVL 895



 Score = 39.3 bits (90), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 38/78 (48%), Gaps = 1/78 (1%)

Query: 207  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            P LV      P K++T   N    LT  G +++ GSN  GQLG G+ + +  P  I    
Sbjct: 1057 PSLVPTNIQAPIKKMTMSGNHYLMLTTVGDLYSWGSNEAGQLGMGNRVSQSVPVLINRSR 1116

Query: 267  EVGSVVQIAAGPSYMLAV 284
            +    V +AAG  + LAV
Sbjct: 1117 D-DQFVAVAAGSRFSLAV 1133


>gi|159037173|ref|YP_001536426.1| chromosome condensation regulator RCC1 [Salinispora arenicola
           CNS-205]
 gi|157916008|gb|ABV97435.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
           CNS-205]
          Length = 569

 Score = 78.2 bits (191), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 71/231 (30%), Positives = 109/231 (47%), Gaps = 8/231 (3%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  H+L L S  +VF+ G +  G LG G  T +      ++FPS   +  V+A   H
Sbjct: 153 VAAGFNHSLALTSAGTVFAWGDNSTGQLGDGTRTNRSTPVA-VSFPSGTVITAVAAGGMH 211

Query: 175 AAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           +  +  +G VF  GDNS+   G    TNR    P +V    G     +  G + +  +T 
Sbjct: 212 SLALTSAGTVFAWGDNSTGQLGDGTRTNR--STPVVVGLPVGTIVTAIAGGGSHSLAVTS 269

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G+    G+N  GQLG G  ++R     +  L    +V  +A G ++ LA+T  G V S+
Sbjct: 270 AGNARAWGNNFVGQLGDGSNINRDASVHVR-LPPGTTVTAVAGGLTHSLALTSVGTVLSW 328

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           GS +   LG G   D   P ++      G+ +  V+AGD   +AL S+G V
Sbjct: 329 GSNNWGQLGDGTARDRNTPGSVS--LPPGVTITAVAAGDLFGLALTSAGTV 377



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 96/225 (42%), Gaps = 8/225 (3%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R     +++ +V + G +  G LG G           +  P    V   +  + H+  V 
Sbjct: 53  RPSPTTVASDAVLAWGDNYYGQLGDGTTNNYRTVPIPVGLPKGTEVTAAAGGDAHSLAVT 112

Query: 180 QSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
            +G V   G N+    G   T NR    P  V    G     V AG N +  LT  G V 
Sbjct: 113 SAGTVLAWGRNAVGQLGDGTTINR--STPVDVRLPPGTTVTAVAAGFNHSLALTSAGTVF 170

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
             G N+ GQLG G   +R TP +++ P   V  +  +AAG  + LA+T  G V+++G  S
Sbjct: 171 AWGDNSTGQLGDGTRTNRSTPVAVSFPSGTV--ITAVAAGGMHSLALTSAGTVFAWGDNS 228

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
              LG G + +   P  +      G  V  ++ G  H +A+ S+G
Sbjct: 229 TGQLGDGTRTNRSTPVVVG--LPVGTIVTAIAGGGSHSLAVTSAG 271



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 60/205 (29%), Positives = 87/205 (42%), Gaps = 14/205 (6%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  H+L L S  +VF+ G +  G LG G  T +      +  P    V  ++   +H
Sbjct: 205 VAAGGMHSLALTSAGTVFAWGDNSTGQLGDGTRTNRSTPVV-VGLPVGTIVTAIAGGGSH 263

Query: 175 AAFVLQSGQVFTCGDNSSFCCG-----HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
           +  V  +G     G+N     G     +RD +  +  P       G     V  GL  + 
Sbjct: 264 SLAVTSAGNARAWGNNFVGQLGDGSNINRDASVHVRLP------PGTTVTAVAGGLTHSL 317

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
            LT  G V + GSN  GQLG G   DR TP S++ L    ++  +AAG  + LA+T  G 
Sbjct: 318 ALTSVGTVLSWGSNNWGQLGDGTARDRNTPGSVS-LPPGVTITAVAAGDLFGLALTSAGT 376

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRA 314
           V ++G      LG G       P A
Sbjct: 377 VLAWGGNIVGQLGDGTTTVRRTPVA 401



 Score = 42.0 bits (97), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 37/109 (33%), Positives = 51/109 (46%), Gaps = 4/109 (3%)

Query: 237 VHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
           V   G N +GQLG G T + R  P  +  L +   V   A G ++ LAVT  G V ++G 
Sbjct: 64  VLAWGDNYYGQLGDGTTNNYRTVPIPVG-LPKGTEVTAAAGGDAHSLAVTSAGTVLAWGR 122

Query: 296 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            +   LG G   +   P  +      G  V  V+AG  H +AL S+G V
Sbjct: 123 NAVGQLGDGTTINRSTP--VDVRLPPGTTVTAVAAGFNHSLALTSAGTV 169


>gi|391347040|ref|XP_003747773.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Metaseiulus occidentalis]
          Length = 523

 Score = 78.2 bits (191), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 69/234 (29%), Positives = 106/234 (45%), Gaps = 15/234 (6%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + +  G  H++ I+ S   FS GS+  G LGHG  T   V+   +        + V+   
Sbjct: 45  ISVACGDQHSVFITASGRTFSFGSNDYGQLGHG-HTKALVNPRCVKALKDKRAILVACGR 103

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           +H        +V+  G NS    G + +      P+LV  L GV  K +TAG + +  L+
Sbjct: 104 SHTLVATDDKKVYAFGINSEHQLGVKSSAAYHADPQLVATLNGVQVKALTAGADHSLALS 163

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
            +G V+  GS+ HGQLG G    R  P     L+  G  + I+AG  +   V  +GV+Y+
Sbjct: 164 AKGIVYLWGSSEHGQLGLGRKKQRKLP---VQLKTEGKAIAISAGAYHSAYVNTDGVLYT 220

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRR----KGIHVVRVSAGDEHVVALDSSG 342
           FG        HG+    L P+  +   +    +G+ V  V+ G  H VAL   G
Sbjct: 221 FGETE-----HGKLGTNLAPKKCRKPSKVPDIQGL-VTSVACGGSHTVALTCDG 268



 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 85/185 (45%), Gaps = 19/185 (10%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V+ V+  + H+ F+  SG+ F+ G N     GH  T + +  PR V+ALK      V  G
Sbjct: 44  VISVACGDQHSVFITASGRTFSFGSNDYGQLGHGHT-KALVNPRCVKALKDKRAILVACG 102

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLG-------HGDTLDRPTPKSIAPLEEVGSVVQIAAG 277
            + T   T    V+  G N+  QLG       H D      P+ +A L  V  V  + AG
Sbjct: 103 RSHTLVATDDKKVYAFGINSEHQLGVKSSAAYHAD------PQLVATLNGV-QVKALTAG 155

Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             + LA++  G+VY +GS  +  LG G +     P  ++T  +     + +SAG  H   
Sbjct: 156 ADHSLALSAKGIVYLWGSSEHGQLGLGRKKQRKLPVQLKTEGK----AIAISAGAYHSAY 211

Query: 338 LDSSG 342
           +++ G
Sbjct: 212 VNTDG 216



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 71/150 (47%), Gaps = 8/150 (5%)

Query: 107 VETSAGNMQITTGRYHTLLISNSSV-FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV 165
           ++T    + I+ G YH+  ++   V ++ G +  G LG      +C   +++  P    +
Sbjct: 193 LKTEGKAIAISAGAYHSAYVNTDGVLYTFGETEHGKLGTNLAPKKCRKPSKV--PDIQGL 250

Query: 166 V-QVSASENHAAFVLQSGQVFTCGDNSS--FCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           V  V+   +H   +   G+ ++ GD S      G R T+    RP L++   GV   +V+
Sbjct: 251 VTSVACGGSHTVALTCDGRAYSFGDGSQGQLGLGQRVTHAG--RPHLIQMPTGVKMARVS 308

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGD 252
           AG + T FL+    ++TCG   HG+L   D
Sbjct: 309 AGQSHTAFLSEGRQMYTCGEGRHGKLALED 338



 Score = 45.4 bits (106), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 53/227 (23%), Positives = 95/227 (41%), Gaps = 10/227 (4%)

Query: 116 ITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +T G  H+L +S    V+  GSS  G LG G +  + +    +   +    + +SA   H
Sbjct: 152 LTAGADHSLALSAKGIVYLWGSSEHGQLGLGRKKQRKLP---VQLKTEGKAIAISAGAYH 208

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           +A+V   G ++T G+      G     +   +P  V  ++G+    V  G + T  LT  
Sbjct: 209 SAYVNTDGVLYTFGETEHGKLGTNLAPKKCRKPSKVPDIQGL-VTSVACGGSHTVALTCD 267

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G  ++ G  + GQLG G  +       +  +     + +++AG S+   ++    +Y+ G
Sbjct: 268 GRAYSFGDGSQGQLGLGQRVTHAGRPHLIQMPTGVKMARVSAGQSHTAFLSEGRQMYTCG 327

Query: 295 SG--SNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            G      L  GE   ++  P  +         V +VS G  H + L
Sbjct: 328 EGRHGKLALEDGEMGSNKFSPMLVDILSL--FQVQQVSCGGCHTLVL 372



 Score = 44.7 bits (104), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 57/125 (45%), Gaps = 7/125 (5%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HT+ L  +   +S G    G LG G   T       I  P+   + +VSA ++H
Sbjct: 254 VACGGSHTVALTCDGRAYSFGDGSQGQLGLGQRVTHAGRPHLIQMPTGVKMARVSAGQSH 313

Query: 175 AAFVLQSGQVFTCGDNS----SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            AF+ +  Q++TCG+      +   G   +N+  F P LV+ L     +QV+ G   T  
Sbjct: 314 TAFLSEGRQMYTCGEGRHGKLALEDGEMGSNK--FSPMLVDILSLFQVQQVSCGGCHTLV 371

Query: 231 LTIRG 235
           L + G
Sbjct: 372 LVVPG 376


>gi|383851572|ref|XP_003701306.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Megachile rotundata]
          Length = 864

 Score = 78.2 bits (191), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 111/240 (46%), Gaps = 14/240 (5%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA----AHVVQVSA 170
           +  GR HTL+ + +  +F+CGS   G LG G       S + +    A    + ++Q++A
Sbjct: 164 VACGRAHTLISTGAQKIFACGSDQEGQLGRGTSAIGDSSSSPVLVYDAGLAGSKILQLAA 223

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
             +H+  ++  G VF  G N     G  D +  + +P  V   +  P KQ++AG   + F
Sbjct: 224 GSHHSLALISDGGVFAWGSNLEGQLGLPDVSGLVNKPTKVHIPE--PVKQISAGYYHSAF 281

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP--LEEVGSVVQIAAGPSYMLAVTGNG 288
           LT  G V+ CG +  G+LG    +D      I P  ++     V +A G  + + +  NG
Sbjct: 282 LTESGLVYICGESESGKLG----IDVNFSTQITPKQMQLPSPAVHVACGGHHTVVLAENG 337

Query: 289 VVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSLC 347
            +Y  GS SN  LG G    EL  P+ +     +   + R+S G+ H   +  SG +  C
Sbjct: 338 NIYCTGSNSNGQLGLGTNVTELHTPKLLSRGMLQNETISRISCGESHTAIVTESGKLFTC 397



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 56/193 (29%), Positives = 87/193 (45%), Gaps = 20/193 (10%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           VV ++  + H+A + QSG++F  G N       GHR+    I +P  V+ LK      V 
Sbjct: 109 VVSITCGDEHSAVICQSGRLFVFGSNDWGQLGLGHRNH---ISKPSCVKVLKPEKVTHVA 165

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG----SVVQIAAGP 278
            G   T   T    +  CGS+  GQLG G +    +  S   + + G     ++Q+AAG 
Sbjct: 166 CGRAHTLISTGAQKIFACGSDQEGQLGRGTSAIGDSSSSPVLVYDAGLAGSKILQLAAGS 225

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH----VVRVSAGDEH 334
            + LA+  +G V+++GS     LG       L   +    +   +H    V ++SAG  H
Sbjct: 226 HHSLALISDGGVFAWGSNLEGQLG-------LPDVSGLVNKPTKVHIPEPVKQISAGYYH 278

Query: 335 VVALDSSGYVSLC 347
              L  SG V +C
Sbjct: 279 SAFLTESGLVYIC 291



 Score = 54.3 bits (129), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 67/138 (48%), Gaps = 5/138 (3%)

Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI+ G YH+  ++ S  V+ CG S  G LG     +  ++  ++  PS A  V V+   +
Sbjct: 271 QISAGYYHSAFLTESGLVYICGESESGKLGIDVNFSTQITPKQMQLPSPA--VHVACGGH 328

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE--ALKGVPCKQVTAGLNFTGFL 231
           H   + ++G ++  G NS+   G       +  P+L+    L+     +++ G + T  +
Sbjct: 329 HTVVLAENGNIYCTGSNSNGQLGLGTNVTELHTPKLLSRGMLQNETISRISCGESHTAIV 388

Query: 232 TIRGHVHTCGSNTHGQLG 249
           T  G + TCG   HG+LG
Sbjct: 389 TESGKLFTCGDGRHGKLG 406



 Score = 39.3 bits (90), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 23/79 (29%), Positives = 45/79 (56%), Gaps = 3/79 (3%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRIN--FPSAAHVVQVSA 170
           + +  G +HT++++ N +++  GS+  G LG G   T+  +   ++        + ++S 
Sbjct: 321 VHVACGGHHTVVLAENGNIYCTGSNSNGQLGLGTNVTELHTPKLLSRGMLQNETISRISC 380

Query: 171 SENHAAFVLQSGQVFTCGD 189
            E+H A V +SG++FTCGD
Sbjct: 381 GESHTAIVTESGKLFTCGD 399


>gi|403347403|gb|EJY73122.1| RCC1 and BTB domaincontaining protein putative [Oxytricha
           trifallax]
          Length = 685

 Score = 78.2 bits (191), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 61/204 (29%), Positives = 92/204 (45%), Gaps = 12/204 (5%)

Query: 124 LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 183
           ++  +  +++CG +  G LGHG ++      T +       V  VS S  H+  V Q  +
Sbjct: 140 IISQDGKLYTCGYNNYGQLGHGTQSNLSTP-TLVQALKDTQVTNVSCSYYHSLIVTQDMR 198

Query: 184 --------VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 235
                   V++ G N +   G   T   I  P+++ +L      Q   GL+ + F+T+ G
Sbjct: 199 QASNQQTTVYSVGRNDNGQLGQEHTCHEI-TPKIIRSLNTRQVIQTACGLHHSVFVTVHG 257

Query: 236 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
            V +CG N +GQLGH DT  R  P  I  L+    +VQ A G  + L     G +Y+FG 
Sbjct: 258 EVFSCGFNDNGQLGHNDTKSRNQPVLIESLKN-KFIVQAACGYYHTLVRRDTGEIYAFGR 316

Query: 296 GSNFCLGHGEQHDEL-QPRAIQTF 318
                LG       L QP+ IQ F
Sbjct: 317 NDKGQLGIETNGQALIQPKQIQEF 340



 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 67/284 (23%), Positives = 113/284 (39%), Gaps = 70/284 (24%)

Query: 121 YHTLLISN---------SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS 171
           YH+L+++          ++V+S G +  G LG    T   ++   I   +   V+Q +  
Sbjct: 188 YHSLIVTQDMRQASNQQTTVYSVGRNDNGQLGQ-EHTCHEITPKIIRSLNTRQVIQTACG 246

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
            +H+ FV   G+VF+CG N +   GH DT +   +P L+E+LK     Q   G   T   
Sbjct: 247 LHHSVFVTVHGEVFSCGFNDNGQLGHNDT-KSRNQPVLIESLKNKFIVQAACGYYHTLVR 305

Query: 232 TIRGHVHTCGSNTHGQLG---HGDTLDRP----------------------------TPK 260
              G ++  G N  GQLG   +G  L +P                               
Sbjct: 306 RDTGEIYAFGRNDKGQLGIETNGQALIQPKQIQEFLTVSNIQHSGGNQNQLHSGQEHNQP 365

Query: 261 SIAPLEEVGSVVQ--------------------------IAAGPSYMLAVTGNGVVYSFG 294
           S   L E G+++Q                          IA G  + +A+  +G +++FG
Sbjct: 366 SSQSLGESGAIMQGLAESNNLNNQQPQVQYLSKKVNISKIACGCYHSIALCESGQLFTFG 425

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            G++  LG G   D+  P+ + +   K   V+ ++ G  H + L
Sbjct: 426 RGNHGQLGQGNTEDQKLPKQVASLHDK--KVIGIAGGFYHTIVL 467



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 55/107 (51%), Gaps = 1/107 (0%)

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
           G N++G+LG GD  +R  P  +   +E+ +V QIAAG  ++  +T NG V + G   +  
Sbjct: 45  GQNSYGELGLGDVQERSIPSQVRFFDEM-NVTQIAAGNEHIAVLTRNGDVLTVGFNGSGQ 103

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSLC 347
           LGHG       P+ I++ +   I  +  + G E++  +   G +  C
Sbjct: 104 LGHGNNKSISTPKKIESLKNIRITHISSANGCENLAIISQDGKLYTC 150



 Score = 41.6 bits (96), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 14/173 (8%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRIN-FPSAAHVVQVSAS 171
           +Q   G YHTL+  ++  +++ G +  G LG        +   +I  F + +++     +
Sbjct: 293 VQAACGYYHTLVRRDTGEIYAFGRNDKGQLGIETNGQALIQPKQIQEFLTVSNIQHSGGN 352

Query: 172 ENHAAFVLQSGQVF------TCGDNSSFCCGHRDTNRPIFRPRLVEAL-KGVPCKQVTAG 224
           +N     L SGQ        + G++ +   G  ++N    +   V+ L K V   ++  G
Sbjct: 353 QNQ----LHSGQEHNQPSSQSLGESGAIMQGLAESNNLNNQQPQVQYLSKKVNISKIACG 408

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG 277
              +  L   G + T G   HGQLG G+T D+  PK +A L +   V+ IA G
Sbjct: 409 CYHSIALCESGQLFTFGRGNHGQLGQGNTEDQKLPKQVASLHD-KKVIGIAGG 460


>gi|444915451|ref|ZP_21235583.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444713382|gb|ELW54282.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 746

 Score = 78.2 bits (191), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 72/241 (29%), Positives = 116/241 (48%), Gaps = 15/241 (6%)

Query: 106 IVETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH 164
           +V +  G   ++ G  H+L L+++ +  + G+++ G LG G  T + +    +  P    
Sbjct: 340 LVSSLTGVTALSAGGNHSLALLADGTARAWGANVSGQLGDGTTTQRTLP---VGLPGLTG 396

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  ++A   H+  VL +G V   G N+    G   T +    P +V AL GV    +TAG
Sbjct: 397 VAALAAGGYHSLAVLANGTVRAWGHNTYGQLGDGSTAQRTA-PVVVPALTGV--VSLTAG 453

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY-MLA 283
            + +  L   G V   G+N  GQLG G T  R TP  ++ L     VV ++ G  Y  LA
Sbjct: 454 YDHSLALLSDGTVRAWGNNASGQLGDGTTNQRGTPVQVSGLTN---VVALSGGKLYHALA 510

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           +  +G V ++G   N  LG G   +   P A+        +VV ++AG ++ +AL S+G 
Sbjct: 511 LLSDGTVRAWGYNMNGQLGDGSTSNRWTPVAVSGL----TNVVAIAAGGDYSLALQSNGT 566

Query: 344 V 344
           V
Sbjct: 567 V 567



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/224 (31%), Positives = 103/224 (45%), Gaps = 13/224 (5%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G Y   L+ + +V + G++  G LG G  T    S   +  P  + VV ++A  NHA  +
Sbjct: 104 GEYSLALLGDGTVRAWGNNTYGQLGDG-TTPHRASPGAV--PGLSGVVAIAAGNNHALAL 160

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
           L  G V   G N+    G   T +    P  V  L GV    + AG N +  +   G V 
Sbjct: 161 LSDGTVRAWGYNAYGQLGDGTTTQ-RRTPVAVLGLTGVVA--IAAGENHSLAVLADGTVR 217

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
             G+NT+G+LG G T  R +P  ++ L     V  IAAG ++ LAV  +G V ++G  ++
Sbjct: 218 AWGNNTYGRLGDGTTTQRTSPVLVSSLT---GVTAIAAGANHSLAVLADGTVRAWGYNAS 274

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
             LG G       P A+         V  +SAG  H +AL + G
Sbjct: 275 GRLGDGTTTQRATPVAVPGL----TGVTEISAGGGHSLALLADG 314



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 73/244 (29%), Positives = 112/244 (45%), Gaps = 23/244 (9%)

Query: 104 SDIVETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA 162
           +++V  S G +      YH L L+S+ +V + G ++ G LG G  + +   +T +     
Sbjct: 495 TNVVALSGGKL------YHALALLSDGTVRAWGYNMNGQLGDGSTSNR---WTPVAVSGL 545

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHR-DTNRPIFRPRLVEALKGVPCKQV 221
            +VV ++A  +++  +  +G V + G       G   DT  P   P+ V  +  V    +
Sbjct: 546 TNVVAIAAGGDYSLALQSNGTVQSWGYGVYGPLGRDYDTYSPT--PKAVPGVTNVVA--I 601

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
            AG N    L   G V+  G N  GQLG G T+ R TP  +  L     VV IA G  + 
Sbjct: 602 AAGANHVLALRADGTVYAWGRNDFGQLGDGTTVQRNTPVQVPGLTN---VVAIATGWDHS 658

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           LA+  +G VY++G      LG G   +  Q P  +        +VV V+AG    +AL S
Sbjct: 659 LALRADGTVYAWGYNYARQLGDGSTANYRQTPAPVPGL----TNVVAVTAGGNQSLALLS 714

Query: 341 SGYV 344
           SG V
Sbjct: 715 SGAV 718



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 87/184 (47%), Gaps = 16/184 (8%)

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR---PIFRPRLVEALKGVPCKQ 220
             V++++ + H+      G V   GDN+S   G   T +   P   P L  A+       
Sbjct: 46  RAVRLASGKAHSLLATPDGTVRAWGDNASGQLGDGTTTQRSSPTAVPGLAGAVA------ 99

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           V+AG  ++  L   G V   G+NT+GQLG G T  R +P ++  L     VV IAAG ++
Sbjct: 100 VSAGGEYSLALLGDGTVRAWGNNTYGQLGDGTTPHRASPGAVPGLS---GVVAIAAGNNH 156

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            LA+  +G V ++G  +   LG G       P A+         VV ++AG+ H +A+ +
Sbjct: 157 ALALLSDGTVRAWGYNAYGQLGDGTTTQRRTPVAVLGL----TGVVAIAAGENHSLAVLA 212

Query: 341 SGYV 344
            G V
Sbjct: 213 DGTV 216



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 67/234 (28%), Positives = 109/234 (46%), Gaps = 14/234 (5%)

Query: 112 GNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
           G + I  G  H+L ++++ +V + G++  G LG G  TTQ  S   ++  S   V  ++A
Sbjct: 196 GVVAIAAGENHSLAVLADGTVRAWGNNTYGRLGDG-TTTQRTSPVLVS--SLTGVTAIAA 252

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
             NH+  VL  G V   G N+S   G   T +    P  V  L GV   +++AG   +  
Sbjct: 253 GANHSLAVLADGTVRAWGYNASGRLGDGTTTQRAT-PVAVPGLTGV--TEISAGGGHSLA 309

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           L   G     GSN  GQLG G   +R +P  ++ L     V  ++AG ++ LA+  +G  
Sbjct: 310 LLADGTARAWGSNVSGQLGDGTVSNRTSPVLVSSLT---GVTALSAGGNHSLALLADGTA 366

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            ++G+  +  LG G       P  +         V  ++AG  H +A+ ++G V
Sbjct: 367 RAWGANVSGQLGDGTTTQRTLPVGLPGL----TGVAALAAGGYHSLAVLANGTV 416



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 65/221 (29%), Positives = 98/221 (44%), Gaps = 22/221 (9%)

Query: 99  SVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRIN 158
           +V   +++V  +AG      G Y   L SN +V S G  + G LG   +T    S T   
Sbjct: 541 AVSGLTNVVAIAAG------GDYSLALQSNGTVQSWGYGVYGPLGRDYDT---YSPTPKA 591

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT---NRPIFRPRLVEALKG 215
            P   +VV ++A  NH   +   G V+  G N     G   T   N P+  P L   +  
Sbjct: 592 VPGVTNVVAIAAGANHVLALRADGTVYAWGRNDFGQLGDGTTVQRNTPVQVPGLTNVVA- 650

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQI 274
                +  G + +  L   G V+  G N   QLG G T + R TP   AP+  + +VV +
Sbjct: 651 -----IATGWDHSLALRADGTVYAWGYNYARQLGDGSTANYRQTP---APVPGLTNVVAV 702

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAI 315
            AG +  LA+  +G V+++G  S+  LG+G       P A+
Sbjct: 703 TAGGNQSLALLSSGAVHAWGDNSHGELGNGSTLTPPAPVAV 743



 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/153 (31%), Positives = 70/153 (45%), Gaps = 6/153 (3%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + I  G  H L L ++ +V++ G +  G LG G   T     T +  P   +VV ++   
Sbjct: 599 VAIAAGANHVLALRADGTVYAWGRNDFGQLGDG---TTVQRNTPVQVPGLTNVVAIATGW 655

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           +H+  +   G V+  G N +   G   T      P  V  L  V    VTAG N +  L 
Sbjct: 656 DHSLALRADGTVYAWGYNYARQLGDGSTANYRQTPAPVPGLTNVVA--VTAGGNQSLALL 713

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 265
             G VH  G N+HG+LG+G TL  P P ++  L
Sbjct: 714 SSGAVHAWGDNSHGELGNGSTLTPPAPVAVTGL 746


>gi|15218867|ref|NP_176767.1| Regulator of chromosome condensation (RCC1) family with FYVE zinc
           finger domain [Arabidopsis thaliana]
 gi|6227017|gb|AAF06053.1|AC009513_9 Contains PF|00169 Pleckstrin homology domain, 6 PF|00415 Regulator
           of chromosome condensation (RCC1) domains and a PF|01363
           FYVE Zinc finger domain [Arabidopsis thaliana]
 gi|332196320|gb|AEE34441.1| Regulator of chromosome condensation (RCC1) family with FYVE zinc
           finger domain [Arabidopsis thaliana]
          Length = 1006

 Score = 78.2 bits (191), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 104/225 (46%), Gaps = 14/225 (6%)

Query: 104 SDIVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGP-----ETTQCVSFTRI 157
           SD++  S   + +  G +HT ++++S  +F+ GS   GVLGHG      +  +  S  R+
Sbjct: 388 SDVLGGSLTVLSVACGAWHTAIVTSSGQLFTYGSGTFGVLGHGSLESVTKPKEVESLRRM 447

Query: 158 NFPSAA----HVVQVSASENHAAF--VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE 211
              S +    H   +  + N   F      G++FT GD      GH D+ R +  P  V 
Sbjct: 448 KVISVSCGPWHTAAIVETANDRKFYNAKSCGKLFTWGDGDKGRLGHADSKRKLV-PTCVT 506

Query: 212 ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV 271
            L      +V+ G   T  L+I G V+T GS+ HGQLG     D+     +  L     V
Sbjct: 507 ELIDHDFIKVSCGWTLTVALSISGTVYTMGSSIHGQLGCPRAKDKSVNVVLGNLTR-QFV 565

Query: 272 VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
             IA+G  ++  +T  G VY++G G N  LG G+  D   P  ++
Sbjct: 566 KDIASGSHHVAVLTSFGNVYTWGKGMNGQLGLGDVRDRNSPVLVE 610



 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 51/179 (28%), Positives = 87/179 (48%), Gaps = 15/179 (8%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  +S    HAA V + G+VF  G+ +S   G +  N  I  P+ VE+L+ V  + V   
Sbjct: 294 VQSISLGAKHAALVTRQGEVFCWGNGNSGKLGLK-VNIDIDHPKRVESLEDVAVRSVACS 352

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-----TPKSIAPLEEVGSVVQIAAGPS 279
            + T  +T  G ++  G +       G T+++      T K    L    +V+ +A G  
Sbjct: 353 DHQTCAVTESGELYLWGID-------GGTIEQSGSQFLTRKISDVLGGSLTVLSVACGAW 405

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           +   VT +G ++++GSG+   LGHG      +P+ +++ RR  + V+ VS G  H  A+
Sbjct: 406 HTAIVTSSGQLFTYGSGTFGVLGHGSLESVTKPKEVESLRR--MKVISVSCGPWHTAAI 462


>gi|413938284|gb|AFW72835.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 801

 Score = 78.2 bits (191), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 94/195 (48%), Gaps = 11/195 (5%)

Query: 152 VSFTRINFP------SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF 205
           VS T I+ P          V  ++  E HAA V + G+VF+ G+ +    GH+ T+  + 
Sbjct: 7   VSGTNISLPRLLKSSQILDVQSIACGEKHAAIVTKQGKVFSWGEENGGRLGHK-TSDSVS 65

Query: 206 RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT--PKSIA 263
            P+++++L   P K +  G  +T  +++ G ++  G   H      +   R    P  + 
Sbjct: 66  DPKIIDSLASTPMKTIALGAKYTCAVSVSGELYEWGEGIHSLGFKNNQCQRSPWFPHKLI 125

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 323
              +  SV +IA G  +   V+  G ++++G G+   LGHG+    +QP+ +++ R  G+
Sbjct: 126 RTSDGISVAKIACGQWHTAIVSSTGKLFTYGHGTFGVLGHGDTRSVVQPKEVESLR--GL 183

Query: 324 HVVRVSAGDEHVVAL 338
            V  V+ G  H  A+
Sbjct: 184 RVKSVACGPWHTAAI 198



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 54/217 (24%), Positives = 96/217 (44%), Gaps = 17/217 (7%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASEN 173
           I  G  H  +++    VFS G    G LGH  +T+  VS  +I +  ++  +  ++    
Sbjct: 29  IACGEKHAAIVTKQGKVFSWGEENGGRLGH--KTSDSVSDPKIIDSLASTPMKTIALGAK 86

Query: 174 HAAFVLQSGQVFTCGDN-SSFCCGHRDTNR-PIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           +   V  SG+++  G+   S    +    R P F  +L+    G+   ++  G   T  +
Sbjct: 87  YTCAVSVSGELYEWGEGIHSLGFKNNQCQRSPWFPHKLIRTSDGISVAKIACGQWHTAIV 146

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN---- 287
           +  G + T G  T G LGHGDT     PK +  L  +  V  +A GP +  A+       
Sbjct: 147 SSTGKLFTYGHGTFGVLGHGDTRSVVQPKEVESLRGL-RVKSVACGPWHTAAIVETSGTP 205

Query: 288 ------GVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 318
                 G ++++G+ S   LGH ++  +L P  +++ 
Sbjct: 206 KSNAPGGKLFTWGNASGEKLGHTDKKSKLVPTRVESL 242



 Score = 57.8 bits (138), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 58/212 (27%), Positives = 85/212 (40%), Gaps = 56/212 (26%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           +I  G++HT ++S++  +F+ G    GVLGHG +T   V    +       V  V+    
Sbjct: 135 KIACGQWHTAIVSSTGKLFTYGHGTFGVLGHG-DTRSVVQPKEVESLRGLRVKSVACGPW 193

Query: 174 HAAFVLQS----------GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
           H A ++++          G++FT G+ S    GH D    +  P  VE+L      QV+ 
Sbjct: 194 HTAAIVETSGTPKSNAPGGKLFTWGNASGEKLGHTDKKSKLV-PTRVESLIDCDFTQVSC 252

Query: 224 GLNFT-----------------------------------------GFLTIRGHVHTCGS 242
           G+ FT                                           LT+ G V T G 
Sbjct: 253 GVVFTIGSKDHGQLGNPRSDSACICMVEGPLKTEFVKDISSGNSHVAVLTMNGKVFTWGK 312

Query: 243 NTHGQLGHGDTLDRPTPKSIAPLEE--VGSVV 272
            T GQLG GD LDR  P  +  LE+  V S+V
Sbjct: 313 GTEGQLGLGDYLDRTFPTLVEALEDKQVDSIV 344


>gi|225464728|ref|XP_002264236.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Vitis
           vinifera]
          Length = 489

 Score = 78.2 bits (191), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 68/259 (26%), Positives = 124/259 (47%), Gaps = 20/259 (7%)

Query: 96  FLQSVEHSSDIVETSAGNMQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSF 154
           FL ++  + D + ++A       G  H++ +S+   VF+ G    G LGH     + +  
Sbjct: 131 FLPTLNPNLDSIRSTA------LGGVHSVALSSLGQVFTWGYGGFGALGHSVYHRELLP- 183

Query: 155 TRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFC-------CGHRDTNRPIFRP 207
             +     A +  ++ +  H A + +SG+++T G +           CG  +    +  P
Sbjct: 184 RMVEGSWNAKIRHIATAGTHTAAITESGELYTWGRDQGDGRLGLGPNCGPNEGGG-LSIP 242

Query: 208 RLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE 267
             V+AL  VP   V+ G  FT  LT  G +   G+N++ +LG GD +    P+ I  L++
Sbjct: 243 SKVKALP-VPVAAVSCGGFFTMVLTQEGQLWNWGANSNYELGRGDKVGGWKPQPIPSLQD 301

Query: 268 VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR 327
           V  ++QIA+G  + LA+T +G V S+G G +  LGH    ++  P  I+    +  HV+ 
Sbjct: 302 V-RIIQIASGGYHSLALTDDGKVLSWGYGQHGQLGHSSIENQKIPTVIEALADE--HVIY 358

Query: 328 VSAGDEHVVALDSSGYVSL 346
           ++ G     A+  +G + +
Sbjct: 359 IACGGSSSAAITDNGKLYM 377



 Score = 71.6 bits (174), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 62/257 (24%), Positives = 115/257 (44%), Gaps = 24/257 (9%)

Query: 97  LQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR 156
           L SVE++S + E       I+ G +H+ L+ +  ++  G    G LG G E     +F  
Sbjct: 82  LPSVENASGLTEVG-----ISCGLFHSSLVVDGKLWIWGKGDGGRLGFGQEYP---AFLP 133

Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
              P+   +   +    H+  +   GQVFT G       GH   +R +  PR+VE     
Sbjct: 134 TLNPNLDSIRSTALGGVHSVALSSLGQVFTWGYGGFGALGHSVYHRELL-PRMVEGSWNA 192

Query: 217 PCKQVTAGLNFTGFLTIRGHVHTCGSNT-HGQLG--------HGDTLDRPTPKSIAPLEE 267
             + +      T  +T  G ++T G +   G+LG         G  L  P+     P+  
Sbjct: 193 KIRHIATAGTHTAAITESGELYTWGRDQGDGRLGLGPNCGPNEGGGLSIPSKVKALPVP- 251

Query: 268 VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR 327
              V  ++ G  + + +T  G ++++G+ SN+ LG G++    +P+ I + +   + +++
Sbjct: 252 ---VAAVSCGGFFTMVLTQEGQLWNWGANSNYELGRGDKVGGWKPQPIPSLQD--VRIIQ 306

Query: 328 VSAGDEHVVALDSSGYV 344
           +++G  H +AL   G V
Sbjct: 307 IASGGYHSLALTDDGKV 323



 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 56/183 (30%), Positives = 85/183 (46%), Gaps = 9/183 (4%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  VS        + Q GQ++  G NS++  G  D     ++P+ + +L+ V   Q+ +G
Sbjct: 252 VAAVSCGGFFTMVLTQEGQLWNWGANSNYELGRGDKVGG-WKPQPIPSLQDVRIIQIASG 310

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
              +  LT  G V + G   HGQLGH    ++  P  I  L +   V+ IA G S   A+
Sbjct: 311 GYHSLALTDDGKVLSWGYGQHGQLGHSSIENQKIPTVIEALADE-HVIYIACGGSSSAAI 369

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF-----RRKGIH-VVRVSAGDEHVVAL 338
           T NG +Y +G+  +  LG      E QP  ++        R G H V+ V+ G  H + L
Sbjct: 370 TDNGKLYMWGNAKDSQLGV-PGLPETQPLPVEVKFLMEDDRLGPHNVLSVAVGASHAMCL 428

Query: 339 DSS 341
            SS
Sbjct: 429 VSS 431


>gi|310825568|ref|YP_003957926.1| bnr repeat domain-containing protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|309398640|gb|ADO76099.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
          Length = 482

 Score = 78.2 bits (191), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 71/228 (31%), Positives = 107/228 (46%), Gaps = 23/228 (10%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           +Y   L ++ +V++CGS+  G LG+G  TT   S  R   P  +  V V+A  +HA  + 
Sbjct: 133 QYSLALHADGTVWACGSNSAGQLGNG--TTAARSAPR-PVPGLSRAVAVAAGGSHALALC 189

Query: 180 QSGQVFTCGDNSSFCCG-----HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
             G V+  G+N     G     HR T      P  V  L+GV    V  G   +  L   
Sbjct: 190 ADGTVWAWGNNGYGQLGNGSTAHRAT------PVQVPGLQGV--VAVAGGYMHSLALCAD 241

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G V   G N +GQLG+G T+  PTP    P+  +  VV +AAG  + LA+  +G V+++G
Sbjct: 242 GTVWAWGFNDYGQLGNGTTVHSPTP---VPVPGLSQVVSVAAGGFHSLALCADGTVWAWG 298

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           +     LG        +P  ++  R     VV V+ G  H +A+ + G
Sbjct: 299 NNGFGQLGEAVSTQRTKPGRVEGLR----EVVAVAGGFYHSLAVRAGG 342



 Score = 67.8 bits (164), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 116/251 (46%), Gaps = 24/251 (9%)

Query: 99  SVEHSSDIVETSA--GNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
           S  H +  V+     G + +  G  H+L L ++ +V++ G +  G LG+G   T   S T
Sbjct: 209 STAHRATPVQVPGLQGVVAVAGGYMHSLALCADGTVWAWGFNDYGQLGNG---TTVHSPT 265

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHR-DTNRPIFRPRLVEALK 214
            +  P  + VV V+A   H+  +   G V+  G+N     G    T R   +P  VE L+
Sbjct: 266 PVPVPGLSQVVSVAAGGFHSLALCADGTVWAWGNNGFGQLGEAVSTQR--TKPGRVEGLR 323

Query: 215 GVPCKQVTAGLNFTGFLTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
            V    V     F   L +R  G + + G+N  GQLG+G       P   AP++ +G+V 
Sbjct: 324 EV----VAVAGGFYHSLAVRAGGSLWSWGNNYSGQLGNGSFSSSARP---APVQGLGAVT 376

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH-VVRVSAG 331
            +AAG  + +AV  +G V+++G      LGH     E  P      R  G+   V V+AG
Sbjct: 377 SVAAGGMHSVAVQADGTVWAWGRNEEGQLGH-----ERAPERATPVRVPGLQGEVAVAAG 431

Query: 332 DEHVVALDSSG 342
             H +++ + G
Sbjct: 432 FYHSLSVQAGG 442



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/126 (34%), Positives = 65/126 (51%), Gaps = 7/126 (5%)

Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
           + V  G  ++  L   G V  CGSN+ GQLG+G T  R  P+   P+  +   V +AAG 
Sbjct: 126 RAVAGGYQYSLALHADGTVWACGSNSAGQLGNGTTAARSAPR---PVPGLSRAVAVAAGG 182

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           S+ LA+  +G V+++G+     LG+G       P  +Q    +G  VV V+ G  H +AL
Sbjct: 183 SHALALCADGTVWAWGNNGYGQLGNGSTAHRATP--VQVPGLQG--VVAVAGGYMHSLAL 238

Query: 339 DSSGYV 344
            + G V
Sbjct: 239 CADGTV 244



 Score = 39.7 bits (91), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 65/154 (42%), Gaps = 21/154 (13%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH----VVQV 168
           + +  G YH+L + +  S++S G++  G LG+G       SF+    P+       V  V
Sbjct: 326 VAVAGGFYHSLAVRAGGSLWSWGNNYSGQLGNG-------SFSSSARPAPVQGLGAVTSV 378

Query: 169 SASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
           +A   H+  V   G V+  G N     GH R   R    P  V  L+G    +V     F
Sbjct: 379 AAGGMHSVAVQADGTVWAWGRNEEGQLGHERAPERAT--PVRVPGLQG----EVAVAAGF 432

Query: 228 TGFLTIR--GHVHTCGSNTHGQLGHGDTLDRPTP 259
              L+++  G +   G N  GQLG  +    P P
Sbjct: 433 YHSLSVQAGGSLWAWGLNDFGQLGDSEAPLMPVP 466


>gi|157849730|gb|ABV89648.1| UVB-resistance 8 [Brassica rapa]
          Length = 432

 Score = 78.2 bits (191), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 64/184 (34%), Positives = 87/184 (47%), Gaps = 5/184 (2%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 219
           P    V+ +SA  +H+  +L    V + G       GH D       P  + AL      
Sbjct: 8   PPPRKVLIISAGASHSVALLSGEVVCSWGRGEDGQLGHGDAEDR-SSPTQLSALDEHQIV 66

Query: 220 QVTAGLNFT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
            VT G + T  +   R  V++ G    G+LGHG++ D  TP  I  L  V  + QIA G 
Sbjct: 67  SVTCGADHTVAYSQSRLEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGV-MIKQIACGD 125

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           S+ LAVT +G V S+G   N  LG G   D L P+ IQ F  +GI +  V+AG EH  A+
Sbjct: 126 SHCLAVTMDGEVQSWGRNQNGQLGLGNTEDSLVPQKIQAF--EGIRIKMVAAGAEHTAAV 183

Query: 339 DSSG 342
              G
Sbjct: 184 TEDG 187



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 63/256 (24%), Positives = 97/256 (37%), Gaps = 50/256 (19%)

Query: 115 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI  G  H L ++ +  V S G +  G LG G  T   +   +I       +  V+A   
Sbjct: 120 QIACGDSHCLAVTMDGEVQSWGRNQNGQLGLG-NTEDSLVPQKIQAFEGIRIKMVAAGAE 178

Query: 174 HAAFVLQSGQVFTCGDN---------------SSFCCGHRDTNRPIFRPRL--------- 209
           H A V + G ++                      + C  RD +  + +P +         
Sbjct: 179 HTAAVTEDGDLYGWDGKIWKFGISDRNDRLFLKEYLCCVRDVDGAVMQPHISFLLWSIIY 238

Query: 210 ----------VEALKGVPC-------------KQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
                        L G PC              Q++ G   T  LT  G ++  G N  G
Sbjct: 239 LWMEQIWPTRTWRLGGSPCFLTNWKRSATAFFSQISGGWRHTMPLTSDGKLYGWGWNKFG 298

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G+ LD+ +P  +    +   VVQ++ G  + LAVT    V+++G G+N  LG GE 
Sbjct: 299 QVGVGNNLDQCSPVQVR-FPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGES 357

Query: 307 HDELQPRAIQTFRRKG 322
            D   P  I+     G
Sbjct: 358 LDRNSPNIIEALSVDG 373



 Score = 39.7 bits (91), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 54/123 (43%), Gaps = 7/123 (5%)

Query: 154 FTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCG---HRDTNRPIFRPRLV 210
            T     + A   Q+S    H   +   G+++  G N     G   + D   P+ + R  
Sbjct: 259 LTNWKRSATAFFSQISGGWRHTMPLTSDGKLYGWGWNKFGQVGVGNNLDQCSPV-QVRFP 317

Query: 211 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 270
           +  K V   QV+ G   T  +T R +V   G  T+GQLG G++LDR +P  I  L   G+
Sbjct: 318 DDQKVV---QVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESLDRNSPNIIEALSVDGA 374

Query: 271 VVQ 273
             Q
Sbjct: 375 SGQ 377


>gi|115374127|ref|ZP_01461415.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
 gi|115368903|gb|EAU67850.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
          Length = 479

 Score = 78.2 bits (191), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 71/228 (31%), Positives = 107/228 (46%), Gaps = 23/228 (10%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           +Y   L ++ +V++CGS+  G LG+G  TT   S  R   P  +  V V+A  +HA  + 
Sbjct: 130 QYSLALHADGTVWACGSNSAGQLGNG--TTAARSAPR-PVPGLSRAVAVAAGGSHALALC 186

Query: 180 QSGQVFTCGDNSSFCCG-----HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
             G V+  G+N     G     HR T      P  V  L+GV    V  G   +  L   
Sbjct: 187 ADGTVWAWGNNGYGQLGNGSTAHRAT------PVQVPGLQGV--VAVAGGYMHSLALCAD 238

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G V   G N +GQLG+G T+  PTP    P+  +  VV +AAG  + LA+  +G V+++G
Sbjct: 239 GTVWAWGFNDYGQLGNGTTVHSPTP---VPVPGLSQVVSVAAGGFHSLALCADGTVWAWG 295

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           +     LG        +P  ++  R     VV V+ G  H +A+ + G
Sbjct: 296 NNGFGQLGEAVSTQRTKPGRVEGLR----EVVAVAGGFYHSLAVRAGG 339



 Score = 67.8 bits (164), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 116/251 (46%), Gaps = 24/251 (9%)

Query: 99  SVEHSSDIVETSA--GNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
           S  H +  V+     G + +  G  H+L L ++ +V++ G +  G LG+G   T   S T
Sbjct: 206 STAHRATPVQVPGLQGVVAVAGGYMHSLALCADGTVWAWGFNDYGQLGNG---TTVHSPT 262

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHR-DTNRPIFRPRLVEALK 214
            +  P  + VV V+A   H+  +   G V+  G+N     G    T R   +P  VE L+
Sbjct: 263 PVPVPGLSQVVSVAAGGFHSLALCADGTVWAWGNNGFGQLGEAVSTQR--TKPGRVEGLR 320

Query: 215 GVPCKQVTAGLNFTGFLTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
            V    V     F   L +R  G + + G+N  GQLG+G       P   AP++ +G+V 
Sbjct: 321 EV----VAVAGGFYHSLAVRAGGSLWSWGNNYSGQLGNGSFSSSARP---APVQGLGAVT 373

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH-VVRVSAG 331
            +AAG  + +AV  +G V+++G      LGH     E  P      R  G+   V V+AG
Sbjct: 374 SVAAGGMHSVAVQADGTVWAWGRNEEGQLGH-----ERAPERATPVRVPGLQGEVAVAAG 428

Query: 332 DEHVVALDSSG 342
             H +++ + G
Sbjct: 429 FYHSLSVQAGG 439



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/126 (34%), Positives = 65/126 (51%), Gaps = 7/126 (5%)

Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
           + V  G  ++  L   G V  CGSN+ GQLG+G T  R  P+   P+  +   V +AAG 
Sbjct: 123 RAVAGGYQYSLALHADGTVWACGSNSAGQLGNGTTAARSAPR---PVPGLSRAVAVAAGG 179

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           S+ LA+  +G V+++G+     LG+G       P  +Q    +G  VV V+ G  H +AL
Sbjct: 180 SHALALCADGTVWAWGNNGYGQLGNGSTAHRATP--VQVPGLQG--VVAVAGGYMHSLAL 235

Query: 339 DSSGYV 344
            + G V
Sbjct: 236 CADGTV 241



 Score = 39.7 bits (91), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 65/154 (42%), Gaps = 21/154 (13%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH----VVQV 168
           + +  G YH+L + +  S++S G++  G LG+G       SF+    P+       V  V
Sbjct: 323 VAVAGGFYHSLAVRAGGSLWSWGNNYSGQLGNG-------SFSSSARPAPVQGLGAVTSV 375

Query: 169 SASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
           +A   H+  V   G V+  G N     GH R   R    P  V  L+G    +V     F
Sbjct: 376 AAGGMHSVAVQADGTVWAWGRNEEGQLGHERAPERAT--PVRVPGLQG----EVAVAAGF 429

Query: 228 TGFLTIR--GHVHTCGSNTHGQLGHGDTLDRPTP 259
              L+++  G +   G N  GQLG  +    P P
Sbjct: 430 YHSLSVQAGGSLWAWGLNDFGQLGDSEAPLMPVP 463


>gi|193671838|ref|XP_001951667.1| PREDICTED: protein RCC2 homolog [Acyrthosiphon pisum]
          Length = 477

 Score = 78.2 bits (191), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 68/248 (27%), Positives = 109/248 (43%), Gaps = 25/248 (10%)

Query: 122 HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           HT+ I+      S G +  G LG      + +       P  A +V  +    H   +  
Sbjct: 118 HTIFITEEGKALSLGRNEKGQLGVKDLLRRDIPTPIEGLPDHA-IVNAATGRGHTLLLTD 176

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            G V++CGDN +  CG + +  P+    +     G P  +V  G  F+  L  +G +++ 
Sbjct: 177 RGAVYSCGDNKNSQCGVK-SKEPVVTTAMRVKYNGPPIVKVGCGAEFSILLDCKGTLYSF 235

Query: 241 GSNTHGQLGH---GDTLDR---------PTPKSIAP-LEEVGSVVQI---------AAGP 278
           G   +GQLGH   G+ ++R           PK I   +E+  + V+I         A G 
Sbjct: 236 GLPEYGQLGHNTNGEYIERAGAINFATVKLPKPIITFVEKTKNKVEILPKPEIRDFACGT 295

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           ++ +A+  +   YS+G G    LGH E  DELQPR I+ F  +   V  V+ G    +A+
Sbjct: 296 NHTVAIDDHKKAYSWGFGGYGRLGHSEPKDELQPRLIKYFDVQRSGVKHVACGPAFSIAI 355

Query: 339 DSSGYVSL 346
           +  G V L
Sbjct: 356 NEFGAVYL 363



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 56/228 (24%), Positives = 94/228 (41%), Gaps = 37/228 (16%)

Query: 118 TGRYHTLLISN-SSVFSCG---SSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           TGR HTLL+++  +V+SCG   +S CGV    P  T  +   R+ + +   +V+V     
Sbjct: 166 TGRGHTLLLTDRGAVYSCGDNKNSQCGVKSKEPVVTTAM---RVKY-NGPPIVKVGCGAE 221

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR-----------PR-----------LVE 211
            +  +   G +++ G       GH      I R           P+            VE
Sbjct: 222 FSILLDCKGTLYSFGLPEYGQLGHNTNGEYIERAGAINFATVKLPKPIITFVEKTKNKVE 281

Query: 212 ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE-EVGS 270
            L     +    G N T  +      ++ G   +G+LGH +  D   P+ I   + +   
Sbjct: 282 ILPKPEIRDFACGTNHTVAIDDHKKAYSWGFGGYGRLGHSEPKDELQPRLIKYFDVQRSG 341

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 318
           V  +A GP++ +A+   G VY FG  S+     GE +  + P+ +Q  
Sbjct: 342 VKHVACGPAFSIAINEFGAVYLFGQMSS----RGEAN--MYPKPVQDL 383


>gi|301122653|ref|XP_002909053.1| RCC1 and BTB domain-containing protein, putative [Phytophthora
           infestans T30-4]
 gi|262099815|gb|EEY57867.1| RCC1 and BTB domain-containing protein, putative [Phytophthora
           infestans T30-4]
          Length = 611

 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 109/237 (45%), Gaps = 11/237 (4%)

Query: 106 IVETSAGN--MQITTGRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA 162
           +VE  AG   + +    +HT +++ N  + +CG +  G LG G  +   V    +++   
Sbjct: 165 LVEELAGKRVVDVACSYFHTAIVMDNGDLHACGCNDYGQLGMGDHSGHLVP-RPVDYFFR 223

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRP-RLVEALKGVPCKQV 221
             V+ V+  +++    L+ G V   G N     G    + P+  P RL   L      Q+
Sbjct: 224 HPVLAVACGQHYTVASLRDGGVVAFGKNDHGQLGLDRVSEPVLLPTRLAPPLDRAVVPQL 283

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
           + G + T  +T  G V+T G N +GQLG G  L    P  +  L  +  + Q+A G  + 
Sbjct: 284 SCGYHHTAIVTEDGAVYTFGRNDYGQLGLGHKLHMARPTPVESLSRM-RITQVACGCYHT 342

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           LA++ +G V+ FG  ++  LG     D L P+ I T R K      V+AG  H V L
Sbjct: 343 LALSDDGKVFPFGRNNHGQLGLETSMDCLSPQLISTLRNK-----PVAAGFYHSVCL 394



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 76/305 (24%), Positives = 116/305 (38%), Gaps = 69/305 (22%)

Query: 97  LQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR 156
           L  +  +  +V+ + GN Q T      +L  N  VF+CG +  G    G  TT+ V   R
Sbjct: 59  LGRINDTKHVVDVACGNEQTT------ILFENGDVFTCGYNDSGQCAIG--TTERVPSLR 110

Query: 157 INFP--SAAHVVQVSASE--NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA 212
            + P  S+ H V++ +     H A +  +G ++T G N     G   T   +    LVE 
Sbjct: 111 FS-PGLSSHHTVRLFSGNGSEHLAALCANGFLYTVGFNMRGQLG-LGTATTVTEATLVEE 168

Query: 213 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD-------------------- 252
           L G     V      T  +   G +H CG N +GQLG GD                    
Sbjct: 169 LAGKRVVDVACSYFHTAIVMDNGDLHACGCNDYGQLGMGDHSGHLVPRPVDYFFRHPVLA 228

Query: 253 ----------------------------TLDRPT-----PKSIAPLEEVGSVVQIAAGPS 279
                                        LDR +     P  +AP  +   V Q++ G  
Sbjct: 229 VACGQHYTVASLRDGGVVAFGKNDHGQLGLDRVSEPVLLPTRLAPPLDRAVVPQLSCGYH 288

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
           +   VT +G VY+FG      LG G +    +P  +++  R  + + +V+ G  H +AL 
Sbjct: 289 HTAIVTEDGAVYTFGRNDYGQLGLGHKLHMARPTPVESLSR--MRITQVACGCYHTLALS 346

Query: 340 SSGYV 344
             G V
Sbjct: 347 DDGKV 351


>gi|449522972|ref|XP_004168499.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Cucumis
           sativus]
          Length = 806

 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 51/166 (30%), Positives = 81/166 (48%), Gaps = 5/166 (3%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           HA  V + G++F+ G+ S    GH      +  P++++ L G   + V  G   T  +T+
Sbjct: 301 HAVLVTRQGEIFSWGEESGGRLGH-GVEADVSHPKIIDTLSGTNVELVACGEYHTCAVTL 359

Query: 234 RGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++T G  TH  G LGHG  +    P+ ++   E   V  I+ G  +   VT  G ++
Sbjct: 360 SGDLYTWGDGTHNYGLLGHGSEVSHWIPQKVSGQMEGIRVSYISCGAWHTAVVTSAGQLF 419

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           +FG GS   LGHG+      PR ++T R  G+   +V+ G  H  A
Sbjct: 420 TFGDGSFGALGHGDHITSNFPREVETLR--GLRTTKVACGVWHTAA 463



 Score = 77.8 bits (190), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 79/264 (29%), Positives = 113/264 (42%), Gaps = 23/264 (8%)

Query: 100 VEHSSDIVETSAGNMQITT-GRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFT 155
           V H   I   S  N+++   G YHT  ++ S     +  G+   G+LGHG E +  +   
Sbjct: 330 VSHPKIIDTLSGTNVELVACGEYHTCAVTLSGDLYTWGDGTHNYGLLGHGSEVSHWIPQK 389

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
                    V  +S    H A V  +GQ+FT GD S    GH D     F PR VE L+G
Sbjct: 390 VSGQMEGIRVSYISCGAWHTAVVTSAGQLFTFGDGSFGALGHGDHITSNF-PREVETLRG 448

Query: 216 VPCKQVTAGLNFTGF-------LTIRG--------HVHTCGSNTHGQLGHGDTLDRPTPK 260
           +   +V  G+  T         L+  G         ++T G    G+LGHGD   R  P+
Sbjct: 449 LRTTKVACGVWHTAAAVEAINELSDSGTSASPSSRKLYTWGDGDKGRLGHGDNEPRLVPE 508

Query: 261 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR 320
            +A L E   + Q+A G    +A+T  G VY+ GS +   LG    + +L P  ++    
Sbjct: 509 CVAALMEE-RICQVACGNDLTVALTTAGRVYTMGSTAYGQLGSATANGKL-PTCVEGEIA 566

Query: 321 KGIHVVRVSAGDEHVVALDSSGYV 344
               V  V+ G  HV  L S   V
Sbjct: 567 NSF-VEEVACGSYHVAVLTSKNEV 589



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 69/245 (28%), Positives = 112/245 (45%), Gaps = 19/245 (7%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGP----------ETTQCVSFTRIN---FPS 161
           I+ G +HT +++++  +F+ G    G LGHG           ET + +  T++    + +
Sbjct: 402 ISCGAWHTAVVTSAGQLFTFGDGSFGALGHGDHITSNFPREVETLRGLRTTKVACGVWHT 461

Query: 162 AAHVVQVSA-SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
           AA V  ++  S++  +    S +++T GD      GH D N P   P  V AL      Q
Sbjct: 462 AAAVEAINELSDSGTSASPSSRKLYTWGDGDKGRLGHGD-NEPRLVPECVAALMEERICQ 520

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           V  G + T  LT  G V+T GS  +GQLG   T +   P  +        V ++A G  +
Sbjct: 521 VACGNDLTVALTTAGRVYTMGSTAYGQLGSA-TANGKLPTCVEGEIANSFVEEVACGSYH 579

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           +  +T    VY++G G N  LGHG+ +    P  +   + K   V  V+ G +  V +  
Sbjct: 580 VAVLTSKNEVYTWGKGLNGQLGHGDNNHRNTPTIVDVLKDK--QVKNVACGSKFTVVICI 637

Query: 341 SGYVS 345
             +VS
Sbjct: 638 HKWVS 642



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 63/243 (25%), Positives = 105/243 (43%), Gaps = 21/243 (8%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAF 177
           GR+  L+     +FS G    G LGHG E    VS  + I+  S  +V  V+  E H   
Sbjct: 299 GRHAVLVTRQGEIFSWGEESGGRLGHGVEAD--VSHPKIIDTLSGTNVELVACGEYHTCA 356

Query: 178 VLQSGQVFTCGDNSSF--CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 235
           V  SG ++T GD +      GH          ++   ++G+    ++ G   T  +T  G
Sbjct: 357 VTLSGDLYTWGDGTHNYGLLGHGSEVSHWIPQKVSGQMEGIRVSYISCGAWHTAVVTSAG 416

Query: 236 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS------VVQIAAGPSYMLAVTGNGV 289
            + T G  + G LGHGD +    P+ +  L  + +      V   AA    +  ++ +G 
Sbjct: 417 QLFTFGDGSFGALGHGDHITSNFPREVETLRGLRTTKVACGVWHTAAAVEAINELSDSGT 476

Query: 290 --------VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
                   +Y++G G    LGHG+    L P  +     +   + +V+ G++  VAL ++
Sbjct: 477 SASPSSRKLYTWGDGDKGRLGHGDNEPRLVPECVAALMEE--RICQVACGNDLTVALTTA 534

Query: 342 GYV 344
           G V
Sbjct: 535 GRV 537



 Score = 51.2 bits (121), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 69/138 (50%), Gaps = 4/138 (2%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E+   +    +  G      +T +G + + G  + G+LGHG   D   PK I  L 
Sbjct: 281 PKALESTVVLDVHGIACGGRHAVLVTRQGEIFSWGEESGGRLGHGVEADVSHPKIIDTLS 340

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPRAIQTFRRKGIH 324
              +V  +A G  +  AVT +G +Y++G G+ N+  LGHG +     P+ + + + +GI 
Sbjct: 341 GT-NVELVACGEYHTCAVTLSGDLYTWGDGTHNYGLLGHGSEVSHWIPQKV-SGQMEGIR 398

Query: 325 VVRVSAGDEHVVALDSSG 342
           V  +S G  H   + S+G
Sbjct: 399 VSYISCGAWHTAVVTSAG 416


>gi|260814706|ref|XP_002602055.1| hypothetical protein BRAFLDRAFT_228262 [Branchiostoma floridae]
 gi|229287360|gb|EEN58067.1| hypothetical protein BRAFLDRAFT_228262 [Branchiostoma floridae]
          Length = 833

 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 72/232 (31%), Positives = 118/232 (50%), Gaps = 26/232 (11%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL L ++  VFS G    G LGHG  +TQ     +I       VV+ +SA   H+A V 
Sbjct: 474 HTLALTADGEVFSWGDGDYGKLGHGNSSTQKYP-KQIQGALQGKVVKSISAGYRHSAAVT 532

Query: 180 QSGQVFTCGD---------NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
           + G++FT G+         +S+   GH DTNR +++P+++EAL G+  ++V  G   +  
Sbjct: 533 EDGELFTWGEGDYGRLGHGDSNRKLGHGDTNR-VYKPKVIEALVGLYIRKVCCGSQSSLA 591

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP--LEEVGS--VVQIAAGPSYMLAVTG 286
           LT  G +   G      LG G     P   ++ P  +EE+ +  +V +A G S+ LA+T 
Sbjct: 592 LTSTGQLFAWGCGAC--LGCGS----PESTALRPKLVEELANTRIVDVACGDSHCLALTH 645

Query: 287 NGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           +  VY++G+ +    G G     + +P+ +      G+ V ++SAG  H +A
Sbjct: 646 DNEVYAWGNNAMGQCGQGHSQSPITKPKKVVGL--DGVTVHQISAGTSHSLA 695



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/238 (26%), Positives = 111/238 (46%), Gaps = 18/238 (7%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +TG    ++  NS V+  GS+    L  G  + + +   +++ P+ A+   + A +    
Sbjct: 365 STGENGNMVTENSEVYVWGSNSSHQLAEG--SQEKILQPKLS-PAFANAQTIEAGQYCTF 421

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF---LTI 233
            V   G V  CG  S    G  D+N      +L    + V  +++++     G    LT 
Sbjct: 422 VVYSDGTVRACGKGSYGRLGLGDSNNQTTLKKLNFDHRYV-IRKISSSKGSDGHTLALTA 480

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V + G   +G+LGHG++  +  PK I    +   V  I+AG  +  AVT +G ++++
Sbjct: 481 DGEVFSWGDGDYGKLGHGNSSTQKYPKQIQGALQGKVVKSISAGYRHSAAVTEDGELFTW 540

Query: 294 GSG---------SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           G G         SN  LGHG+ +   +P+ I+     G+++ +V  G +  +AL S+G
Sbjct: 541 GEGDYGRLGHGDSNRKLGHGDTNRVYKPKVIEAL--VGLYIRKVCCGSQSSLALTSTG 596


>gi|58533115|gb|AAW78912.1| putative chromosome condensation factor [Triticum turgidum]
          Length = 882

 Score = 77.8 bits (190), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 63/221 (28%), Positives = 105/221 (47%), Gaps = 18/221 (8%)

Query: 116 ITTGRYHTLLISN-SSVFSCGSSLCGVLGHG-------PETTQCVSFTRI-----NFPSA 162
           ++ G +HT LI++   +F+ G    GVLGHG       P   + +S  +           
Sbjct: 189 VSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSISCPREVESLSGLKTIAVACGVWHT 248

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           A +V+V  +++ A   + +G++FT GD      GH D      +P  V +L      +V 
Sbjct: 249 AAIVEVIVTQSSA--TVSAGKLFTWGDGDKHRLGHGD-KEARLKPTCVASLIDYDFYRVA 305

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
            G + T  LT  G V T G++ +GQLG+ ++  RP         E   V+QIA G  ++ 
Sbjct: 306 CGHSLTVGLTTSGKVWTMGNSVYGQLGNLNSDGRPCLVEDKIASE--HVLQIACGSYHVA 363

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 323
            +T    V+++G G+N  LGHG+  D   P  ++  R + +
Sbjct: 364 VLTSRSEVFTWGKGANGRLGHGDIEDRKVPTTVEALRDRAV 404



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/177 (32%), Positives = 87/177 (49%), Gaps = 7/177 (3%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  V     HA+ V ++G+VFT G++S    GH  T      PRLVE+L       V  G
Sbjct: 79  VYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGH-GTREDSVHPRLVESLAACNIDFVACG 137

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
              T  +T  G ++T G  TH  G LGHG  +    P+ I+ PLE +  +  ++ G  + 
Sbjct: 138 EFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGPLEGL-QIAYVSCGTWHT 196

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             +T  G +++FG GS   LGHG+      PR +++    G+  + V+ G  H  A+
Sbjct: 197 ALITSMGQLFTFGDGSFGVLGHGDLKSISCPREVESL--SGLKTIAVACGVWHTAAI 251



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 65/246 (26%), Positives = 106/246 (43%), Gaps = 33/246 (13%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSASE 172
           R+ +L+  N  VF+ G    G LGHG       P   + ++   I+F        V+  E
Sbjct: 87  RHASLVTRNGEVFTWGEDSGGRLGHGTREDSVHPRLVESLAACNIDF--------VACGE 138

Query: 173 NHAAFVLQSGQVFTCGDNSSFC--CGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            H   V  +G+++T GD +      GH  D    I R R+   L+G+    V+ G   T 
Sbjct: 139 FHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPR-RISGPLEGLQIAYVSCGTWHTA 197

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV----- 284
            +T  G + T G  + G LGHGD      P+ +  L  + ++  +A G  +  A+     
Sbjct: 198 LITSMGQLFTFGDGSFGVLGHGDLKSISCPREVESLSGLKTIA-VACGVWHTAAIVEVIV 256

Query: 285 ------TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
                    G ++++G G    LGHG++   L+P  + +      +  RV+ G    V L
Sbjct: 257 TQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDYDFY--RVACGHSLTVGL 314

Query: 339 DSSGYV 344
            +SG V
Sbjct: 315 TTSGKV 320



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 67/245 (27%), Positives = 107/245 (43%), Gaps = 23/245 (9%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G +HT  ++ +     +  G+   G+LGHG +    +   RI+ P     +  VS  
Sbjct: 134 VACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIP-RRISGPLEGLQIAYVSCG 192

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H A +   GQ+FT GD S    GH D  + I  PR VE+L G+    V  G+  T  +
Sbjct: 193 TWHTALITSMGQLFTFGDGSFGVLGHGDL-KSISCPREVESLSGLKTIAVACGVWHTAAI 251

Query: 232 T-----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
                         G + T G     +LGHGD   R  P  +A L +     ++A G S 
Sbjct: 252 VEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDY-DFYRVACGHSL 310

Query: 281 MLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
            + +T +G V++ G   N   G  G  + + +P  ++  +    HV++++ G  HV  L 
Sbjct: 311 TVGLTTSGKVWTMG---NSVYGQLGNLNSDGRPCLVED-KIASEHVLQIACGSYHVAVLT 366

Query: 340 SSGYV 344
           S   V
Sbjct: 367 SRSEV 371



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 66/140 (47%), Gaps = 4/140 (2%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E+   +    V  G+     +T  G V T G ++ G+LGHG   D   P+ +  L 
Sbjct: 68  PKPLESNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSVHPRLVESLA 127

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIH 324
              ++  +A G  +  AVT  G +Y++G G++    LGHG       PR I +   +G+ 
Sbjct: 128 AC-NIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRI-SGPLEGLQ 185

Query: 325 VVRVSAGDEHVVALDSSGYV 344
           +  VS G  H   + S G +
Sbjct: 186 IAYVSCGTWHTALITSMGQL 205


>gi|326923408|ref|XP_003207928.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Meleagris gallopavo]
          Length = 1056

 Score = 77.8 bits (190), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 97/206 (47%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S  S VFS G +  G LG G E  +  S   I         Q++A  
Sbjct: 140 VQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDDNDR-YVPTLLKSLRTQKVVHICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V QI  G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSLVTQITCGRQHTTAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGTTSNRKSPFTVK 342



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 103/224 (45%), Gaps = 7/224 (3%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKARKRPEHVGALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G  +    G   T   I  PR +++L  +   QV  G   +  L+    V +
Sbjct: 101 DKGQVYAWGLATDGQLGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFS 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G +   + +P  I  L  +    QIAAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGYEYKKQNSPHVIKSLLGI-PFAQIAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
             LG  + +D   P  +++ R +   VV +  G++H  AL   G
Sbjct: 220 GQLGLNDDNDRYVPTLLKSLRTQ--KVVHICCGEDHTAALTKEG 261



 Score = 67.4 bits (163), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 66/213 (30%), Positives = 94/213 (44%), Gaps = 9/213 (4%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     +  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 253
             GH    +   RP  V AL       V+ G   T  L  +G V+  G  T GQLG   T
Sbjct: 65  QLGHEKARK---RPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLPGT 121

Query: 254 LD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
            +    P++I  L E+  +VQ+A G  + LA++    V+S+G      LG G E   +  
Sbjct: 122 EECIRVPRNIKSLSEI-QIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           P  I++    GI   +++AG  H   L  SG +
Sbjct: 181 PHVIKSLL--GIPFAQIAAGGAHSFVLTLSGAI 211


>gi|428171675|gb|EKX40590.1| hypothetical protein GUITHDRAFT_75473, partial [Guillardia theta
           CCMP2712]
          Length = 413

 Score = 77.8 bits (190), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 57/177 (32%), Positives = 91/177 (51%), Gaps = 20/177 (11%)

Query: 119 GRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ------VSAS 171
           G+YHT+ ++    VFSCG +L G LG G       S +  N P+    +Q      ++  
Sbjct: 248 GQYHTIFLTEEGMVFSCGKNLNGQLGLG-------SRSSTNVPTLIAALQERPASMIACG 300

Query: 172 ENHAAFVLQSGQVFTCGDN--SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            +H   VL+ G++FT G N       GH D+   +  P  VE L+ V   +++ G +FT 
Sbjct: 301 YSHTCVVLEDGKLFTFGYNHQGQLGLGHTDS---VSSPMQVETLRNVKVVKISCGTHFTC 357

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
            L+  G + + G N HGQLG GD+ DR  P  + P     ++ +IA G  +++A++G
Sbjct: 358 VLSESGELWSFGCNCHGQLGLGDSTDRLVP-VLVPSMTKKNLSEIACGFHHLVAISG 413



 Score = 73.9 bits (180), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 72/233 (30%), Positives = 111/233 (47%), Gaps = 26/233 (11%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
           VF+CG +  G LGH     Q V  + +       +V+V+A    + F+ + G+V+ CG N
Sbjct: 42  VFACGQNRKGELGHSTFREQ-VEMSLVQSLRRKRIVKVAAGSETSYFLTEEGKVYCCGLN 100

Query: 191 SSFCCGH--RDT-----NRPIFRPRLVEALKGVP--CKQVTA----GLNFTGFLTIRGHV 237
           S+   G   R+T     NR       +E ++G+P  CK V      G      +T  G V
Sbjct: 101 ST---GQLARETHQGSANRSKEYSSDIELMEGLPPDCKVVQVSCFNGAEHVLVVTSAGQV 157

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY--MLAVTGNGVVYSFGS 295
           ++CG N HGQLG G T   P   S+  +E +  V  ++A  SY   + V+ +G  +SFG 
Sbjct: 158 YSCGCNNHGQLGLGSTKMSP---SLLLVESLKHVRVLSASCSYHHSVVVSSDGSAFSFGL 214

Query: 296 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA-GDEHVVALDSSGYVSLC 347
                LG G + ++L P  ++       H+VR++A G  H + L   G V  C
Sbjct: 215 NDCGQLGIGTRPNQLLPHRVEL---PSPHLVRLAACGQYHTIFLTEEGMVFSC 264



 Score = 70.9 bits (172), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 77/255 (30%), Positives = 111/255 (43%), Gaps = 17/255 (6%)

Query: 98  QSVEHSSDI-----VETSAGNMQIT--TGRYHTLLISNS-SVFSCGSSLCGVLGHGPETT 149
           +S E+SSDI     +      +Q++   G  H L+++++  V+SCG +  G LG G  T 
Sbjct: 116 RSKEYSSDIELMEGLPPDCKVVQVSCFNGAEHVLVVTSAGQVYSCGCNNHGQLGLG-STK 174

Query: 150 QCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRP-IFRP 207
              S   +       V+  S S +H+  V   G  F+ G N    CG      RP    P
Sbjct: 175 MSPSLLLVESLKHVRVLSASCSYHHSVVVSSDGSAFSFGLND---CGQLGIGTRPNQLLP 231

Query: 208 RLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE 267
             VE       +    G   T FLT  G V +CG N +GQLG G       P  IA L+E
Sbjct: 232 HRVELPSPHLVRLAACGQYHTIFLTEEGMVFSCGKNLNGQLGLGSRSSTNVPTLIAALQE 291

Query: 268 VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR 327
             + + IA G S+   V  +G +++FG      LG G       P  ++T R   + VV+
Sbjct: 292 RPASM-IACGYSHTCVVLEDGKLFTFGYNHQGQLGLGHTDSVSSPMQVETLRN--VKVVK 348

Query: 328 VSAGDEHVVALDSSG 342
           +S G      L  SG
Sbjct: 349 ISCGTHFTCVLSESG 363


>gi|224079652|ref|XP_002305904.1| predicted protein [Populus trichocarpa]
 gi|222848868|gb|EEE86415.1| predicted protein [Populus trichocarpa]
          Length = 1078

 Score = 77.8 bits (190), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 106/227 (46%), Gaps = 23/227 (10%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           +  G +HT  +S+S  +F+ G    GVLGHG    Q VS  + +       V  V+    
Sbjct: 417 VACGDWHTAAVSSSGQLFTYGDGTFGVLGHG--NLQSVSHPKEVESLKGLWVKSVACGSW 474

Query: 174 HAAFVLQ-----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           H A ++             G++FT GD      GH D  + + +P  V  L      QV+
Sbjct: 475 HTAAIVDVIFDRFKFNGVGGKLFTWGDGDKGRLGHADLEKKL-QPTCVAQLVEHDFVQVS 533

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE---EVGSVVQIAAGPS 279
            G   T  LT  G ++T GS+ HGQLG+    +    KSIA +E   +   V +I++G  
Sbjct: 534 CGRMLTVALTRTGKIYTMGSSVHGQLGNPQAKN----KSIAIVEGKLKEEFVKEISSGSY 589

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
           ++ A+T  G VY++G G+N  LG G   D   P  ++  R + +  +
Sbjct: 590 HVAALTSGGSVYTWGKGTNGQLGLGNVEDRNVPTLVEALRDRQVQSI 636



 Score = 71.2 bits (173), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 54/177 (30%), Positives = 87/177 (49%), Gaps = 7/177 (3%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  +S   NHAA + + G+VF  G+ S    GH+  +  +  P +VE+L G   K V  G
Sbjct: 307 VRNISLGRNHAALITKRGEVFCWGEGSRGKLGHK-VDMDVSSPTIVESLDGFLVKFVACG 365

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQ--LGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
              T  LT  G +   G N +G   +    T  +  P+ I+ PL  V S+  +A G  + 
Sbjct: 366 EYQTCALTDSGELFVWGENKYGGNLVCEERTGSQWLPRQISGPLAGV-SISNVACGDWHT 424

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            AV+ +G ++++G G+   LGHG       P+ +++   KG+ V  V+ G  H  A+
Sbjct: 425 AAVSSSGQLFTYGDGTFGVLGHGNLQSVSHPKEVESL--KGLWVKSVACGSWHTAAI 479



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/142 (27%), Positives = 68/142 (47%), Gaps = 8/142 (5%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+L+E    +  + ++ G N    +T RG V   G  + G+LGH   +D  +P  +  L+
Sbjct: 296 PKLLEPTVMLDVRNISLGRNHAALITKRGEVFCWGEGSRGKLGHKVDMDVSSPTIVESLD 355

Query: 267 EVGSVVQ-IAAGPSYMLAVTGNGVVYSFGS---GSNFCLGHGEQHDELQPRAIQTFRRKG 322
             G +V+ +A G     A+T +G ++ +G    G N  +       +  PR I +    G
Sbjct: 356 --GFLVKFVACGEYQTCALTDSGELFVWGENKYGGNL-VCEERTGSQWLPRQI-SGPLAG 411

Query: 323 IHVVRVSAGDEHVVALDSSGYV 344
           + +  V+ GD H  A+ SSG +
Sbjct: 412 VSISNVACGDWHTAAVSSSGQL 433


>gi|354584103|ref|ZP_09003000.1| Listeria/Bacterioides repeat-containing protein [Paenibacillus
           lactis 154]
 gi|353197365|gb|EHB62858.1| Listeria/Bacterioides repeat-containing protein [Paenibacillus
           lactis 154]
          Length = 1286

 Score = 77.8 bits (190), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 76/240 (31%), Positives = 116/240 (48%), Gaps = 29/240 (12%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA----AHVVQV 168
           + + TG   T+ L S+ +V++ GS+  G LG G       + T +N P      + +  V
Sbjct: 86  IDVHTGVRSTMALRSDGTVWTWGSNENGQLGIG-------TVTDMNVPGQVSGLSGIKAV 138

Query: 169 SASENHAAFVL-QSGQVFTCGDNSSFCCGHRDT---NRPIFRPRLVEALKGVPCKQVTAG 224
           S    + +  L + G V+T G N +   G+  T   N P+     V  L  V    + AG
Sbjct: 139 SGGLGYHSMALSEDGSVWTWGKNDNGELGNGTTLQQNTPV----QVAGLNDVTA--IAAG 192

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             F+  L   G V   G N  G+LG G T DR  P  +A L +V   + IAAG S+ LAV
Sbjct: 193 GYFSLALKSDGTVWAWGVNGDGELGDGTTTDRYVPVQVAGLTDV---MAIAAGGSHSLAV 249

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           T +G V+++G  +   LG G + +  +P  I+  +    H+V V+ G  H +ALD +G V
Sbjct: 250 TQDGTVWAWGKNTYGTLGDGTRTNRTRPVQIKNLQ----HIVAVAGGGYHSLALDRTGNV 305



 Score = 77.8 bits (190), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 71/232 (30%), Positives = 107/232 (46%), Gaps = 15/232 (6%)

Query: 115 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           ++  G YHT  L+S+  V+S G    G LG+G   T     T +      HV+ V     
Sbjct: 37  KLVAGYYHTASLVSSGEVYSWGYGDRGQLGNG---TWSARTTPVMAKGLNHVIDVHTGVR 93

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF-LT 232
               +   G V+T G N +   G   T   +  P  V  L G+  K V+ GL +    L+
Sbjct: 94  STMALRSDGTVWTWGSNENGQLG-IGTVTDMNVPGQVSGLSGI--KAVSGGLGYHSMALS 150

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G V T G N +G+LG+G TL + TP  +A L +V +   IAAG  + LA+  +G V++
Sbjct: 151 EDGSVWTWGKNDNGELGNGTTLQQNTPVQVAGLNDVTA---IAAGGYFSLALKSDGTVWA 207

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           +G   +  LG G   D   P  +         V+ ++AG  H +A+   G V
Sbjct: 208 WGVNGDGELGDGTTTDRYVPVQVAGL----TDVMAIAAGGSHSLAVTQDGTV 255



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 55/199 (27%), Positives = 88/199 (44%), Gaps = 12/199 (6%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G Y +L L S+ +V++ G +  G LG G  T +   +  +       V+ ++A  +H
Sbjct: 189 IAAGGYFSLALKSDGTVWAWGVNGDGELGDGTTTDR---YVPVQVAGLTDVMAIAAGGSH 245

Query: 175 AAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           +  V Q G V+  G N+    G    TNR   RP  ++ L+ +    V  G   +  L  
Sbjct: 246 SLAVTQDGTVWAWGKNTYGTLGDGTRTNRT--RPVQIKNLQHIVA--VAGGGYHSLALDR 301

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G+V + G N+  QLG G       P    P+  +  V +IAAG  + +A+  +G V+ +
Sbjct: 302 TGNVWSWGDNSQRQLGVGSNASSLIP---VPVSGIEHVREIAAGGFHSVAMKKDGTVWGW 358

Query: 294 GSGSNFCLGHGEQHDELQP 312
           G      LG G       P
Sbjct: 359 GFNGGGQLGDGTSSTRDTP 377



 Score = 47.8 bits (112), Expect = 0.008,   Method: Composition-based stats.
 Identities = 43/148 (29%), Positives = 71/148 (47%), Gaps = 9/148 (6%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           M I  G  H+L ++ + +V++ G +  G LG G  T +    TR +   +  H+V V+  
Sbjct: 237 MAIAAGGSHSLAVTQDGTVWAWGKNTYGTLGDGTRTNR----TRPVQIKNLQHIVAVAGG 292

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H+  + ++G V++ GDNS    G   +N     P  V  ++ V  +++ AG   +  +
Sbjct: 293 GYHSLALDRTGNVWSWGDNSQRQLG-VGSNASSLIPVPVSGIEHV--REIAAGGFHSVAM 349

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTP 259
              G V   G N  GQLG G +  R TP
Sbjct: 350 KKDGTVWGWGFNGGGQLGDGTSSTRDTP 377


>gi|413946332|gb|AFW78981.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 1009

 Score = 77.8 bits (190), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 66/229 (28%), Positives = 111/229 (48%), Gaps = 16/229 (6%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVS-FTRINFPSA-A 163
           + ++ G +H+ L ++S  VF+ G    G LGHG       P+  + +S F  I       
Sbjct: 353 LSVSCGSWHSALTTSSGKVFTFGDGTFGALGHGNRHTVAYPKEVETLSGFRTIKVACGLW 412

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
           H   +  + N A   + S ++FT G       GH D +  +  P  V++L      QV  
Sbjct: 413 HSAAIVETTNQAGVNVISRKLFTWGAGDKNPLGHGDKDARLV-PTCVQSLIDYNFHQVAC 471

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAGPSYML 282
           G + T  L+  GHV T GS+++GQLG+  +  + PTP       E+  V +I+ G  ++ 
Sbjct: 472 GHSMTIALSTSGHVFTMGSSSNGQLGNPKSDGKHPTPVQDRLAGEL--VEEISCGSCHVA 529

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
            +T    VY++G G+N  LGHG   D+ +P  ++  + +  HV  ++ G
Sbjct: 530 VLTSRSEVYTWGMGANGRLGHGGVEDKKKPTLVEALKDR--HVKSIACG 576



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/177 (32%), Positives = 87/177 (49%), Gaps = 7/177 (3%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++    H A   + G+VF  G+      GH  T+  I RP+LVEAL     + V  G
Sbjct: 245 VQQIACGYRHIALTTRQGEVFAWGEELGGRLGH-GTDADISRPKLVEALAVSNVEYVACG 303

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
              T  +T  G ++T G   +  G LGHG       PK ++ PLE V  V+ ++ G  + 
Sbjct: 304 EFHTCAITASGDLYTWGDGYYNAGLLGHGAGTSHWLPKRVSGPLEGV-QVLSVSCGSWHS 362

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
              T +G V++FG G+   LGHG +H    P+ ++T    G   ++V+ G  H  A+
Sbjct: 363 ALTTSSGKVFTFGDGTFGALGHGNRHTVAYPKEVETL--SGFRTIKVACGLWHSAAI 417



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 69/244 (28%), Positives = 108/244 (44%), Gaps = 19/244 (7%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASE 172
           QI  G  H  L +    VF+ G  L G LGHG  T   +S  + +   + ++V  V+  E
Sbjct: 247 QIACGYRHIALTTRQGEVFAWGEELGGRLGHG--TDADISRPKLVEALAVSNVEYVACGE 304

Query: 173 NHAAFVLQSGQVFTCGDN--SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            H   +  SG ++T GD   ++   GH          R+   L+GV    V+ G   +  
Sbjct: 305 FHTCAITASGDLYTWGDGYYNAGLLGHGAGTSHWLPKRVSGPLEGVQVLSVSCGSWHSAL 364

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV------ 284
            T  G V T G  T G LGHG+      PK +  L      +++A G  +  A+      
Sbjct: 365 TTSSGKVFTFGDGTFGALGHGNRHTVAYPKEVETLSGF-RTIKVACGLWHSAAIVETTNQ 423

Query: 285 TGNGVV----YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            G  V+    +++G+G    LGHG++   L P  +Q+      H  +V+ G    +AL +
Sbjct: 424 AGVNVISRKLFTWGAGDKNPLGHGDKDARLVPTCVQSLIDYNFH--QVACGHSMTIALST 481

Query: 341 SGYV 344
           SG+V
Sbjct: 482 SGHV 485



 Score = 57.8 bits (138), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 78/169 (46%), Gaps = 12/169 (7%)

Query: 182 GQVFT----CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
           G+V+T       ++++ C   D    I  P+ +E+   +  +Q+  G       T +G V
Sbjct: 209 GEVWTDMIPAEGSANYLCSKAD----ILIPKPLESDVVLDVQQIACGYRHIALTTRQGEV 264

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG- 296
              G    G+LGHG   D   PK +  L  V +V  +A G  +  A+T +G +Y++G G 
Sbjct: 265 FAWGEELGGRLGHGTDADISRPKLVEAL-AVSNVEYVACGEFHTCAITASGDLYTWGDGY 323

Query: 297 -SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            +   LGHG       P+ + +   +G+ V+ VS G  H     SSG V
Sbjct: 324 YNAGLLGHGAGTSHWLPKRV-SGPLEGVQVLSVSCGSWHSALTTSSGKV 371


>gi|193783741|dbj|BAG53723.1| unnamed protein product [Homo sapiens]
          Length = 503

 Score = 77.8 bits (190), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 63/216 (29%), Positives = 94/216 (43%), Gaps = 4/216 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  +F  G++ CG LG G +    +   R++  +   +  +S  S  H       G+VFT
Sbjct: 68  NDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFT 126

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN  +    +   L      +V  G   +  LT  G V   G N  G
Sbjct: 127 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 186

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T+++P P+ +    +   VV IA G    +AV   G VY +G   N  LG G  
Sbjct: 187 QVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNS 246

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            +  QP   +    +GI V RV+ G  H  A  + G
Sbjct: 247 GN--QPTPCRVAALQGIRVQRVACGYTHTSAAKTQG 280



 Score = 40.4 bits (93), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 65/145 (44%), Gaps = 6/145 (4%)

Query: 203 PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 260
           PIF     E L+ +   C   +AG N   + T+   +   G+N  G LG GD      P+
Sbjct: 36  PIFSLCSEEELQLIRQACVFGSAG-NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPR 94

Query: 261 SIAPLE-EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
            +  L  +  + +   +GP  +LA T  G V+++G  +   LG+G  +  L P  I T  
Sbjct: 95  RLDSLNGKKIACLSYGSGPHIVLATT-EGEVFTWGHNAYSQLGNGTTNHGLVPCHIST-N 152

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYV 344
                V+ V+ G  H + L S G V
Sbjct: 153 LSNKQVIEVACGSYHSLVLTSDGEV 177


>gi|357131779|ref|XP_003567511.1| PREDICTED: uncharacterized protein LOC100833487 [Brachypodium
           distachyon]
          Length = 913

 Score = 77.8 bits (190), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 105/227 (46%), Gaps = 30/227 (13%)

Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGP-ETTQCVSFTRINFPSAAHVVQVSASEN 173
           ++ G +HT LI S   +F+ G    GVLGHG  E+  C     +   S    + V+    
Sbjct: 204 VSCGTWHTALITSTGQLFTFGDGTFGVLGHGNRESIPCPR--EVESLSGLKTIAVACGVW 261

Query: 174 HAAFVLQ-----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           H A V++           SG++FT GD      GH D   P  +P  V +L      ++ 
Sbjct: 262 HTAAVVEVIVTQSSSSISSGKLFTWGDGDKHRLGHGD-KEPRVKPTCVASLIDYDFHRIA 320

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL----EEV--GSVVQIAA 276
            G + T  LT  G V   G+  +GQLG+        P+S   L    E++   +VVQ+A 
Sbjct: 321 CGHSLTVGLTTSGQVWGMGNTVYGQLGN--------PRSDGKLPCLVEDIMGENVVQVAC 372

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 323
           G  ++  +T    V+++G G+N  LGHG+  D   P  ++  R +G+
Sbjct: 373 GSYHVAVLTVKSEVFTWGKGANGRLGHGDIEDRKIPTLVEVLRDRGV 419



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 56/176 (31%), Positives = 82/176 (46%), Gaps = 5/176 (2%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  V     HAA V ++G+VFT G+ S    GH  +      P LVE+L       V  G
Sbjct: 94  VYHVDCGVKHAALVTKNGEVFTWGEESGGRLGH-GSREDYIHPSLVESLAVSNVDFVACG 152

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
              T  +T  G ++T G  TH  G LGHG  L    PK I+   E   V  ++ G  +  
Sbjct: 153 EFHTCAVTTAGELYTWGDGTHNIGLLGHGTDLSHWIPKRISGALEGQQVAYVSCGTWHTA 212

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            +T  G +++FG G+   LGHG +     PR +++    G+  + V+ G  H  A+
Sbjct: 213 LITSTGQLFTFGDGTFGVLGHGNRESIPCPREVESL--SGLKTIAVACGVWHTAAV 266



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/245 (25%), Positives = 105/245 (42%), Gaps = 31/245 (12%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSASE 172
           ++  L+  N  VF+ G    G LGHG       P   + ++ + ++F        V+  E
Sbjct: 102 KHAALVTKNGEVFTWGEESGGRLGHGSREDYIHPSLVESLAVSNVDF--------VACGE 153

Query: 173 NHAAFVLQSGQVFTCGDNSSFC--CGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            H   V  +G+++T GD +      GH          R+  AL+G     V+ G   T  
Sbjct: 154 FHTCAVTTAGELYTWGDGTHNIGLLGHGTDLSHWIPKRISGALEGQQVAYVSCGTWHTAL 213

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT----- 285
           +T  G + T G  T G LGHG+    P P+ +  L  + ++  +A G  +  AV      
Sbjct: 214 ITSTGQLFTFGDGTFGVLGHGNRESIPCPREVESLSGLKTIA-VACGVWHTAAVVEVIVT 272

Query: 286 ------GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
                  +G ++++G G    LGHG++   ++P  + +      H  R++ G    V L 
Sbjct: 273 QSSSSISSGKLFTWGDGDKHRLGHGDKEPRVKPTCVASLIDYDFH--RIACGHSLTVGLT 330

Query: 340 SSGYV 344
           +SG V
Sbjct: 331 TSGQV 335



 Score = 51.2 bits (121), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 66/143 (46%), Gaps = 4/143 (2%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  P+ +E+   +    V  G+     +T  G V T G  + G+LGHG   D   P  + 
Sbjct: 80  VLLPKPLESKLVLDVYHVDCGVKHAALVTKNGEVFTWGEESGGRLGHGSREDYIHPSLVE 139

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRK 321
            L  V +V  +A G  +  AVT  G +Y++G G++    LGHG       P+ I +   +
Sbjct: 140 SL-AVSNVDFVACGEFHTCAVTTAGELYTWGDGTHNIGLLGHGTDLSHWIPKRI-SGALE 197

Query: 322 GIHVVRVSAGDEHVVALDSSGYV 344
           G  V  VS G  H   + S+G +
Sbjct: 198 GQQVAYVSCGTWHTALITSTGQL 220



 Score = 38.1 bits (87), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 51/111 (45%), Gaps = 5/111 (4%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L ++  V+  G+++ G LG+     +      +      +VVQV+    H A +    +V
Sbjct: 329 LTTSGQVWGMGNTVYGQLGNPRSDGKLPCL--VEDIMGENVVQVACGSYHVAVLTVKSEV 386

Query: 185 FTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           FT G  ++   GH D  +R I  P LVE L+    + +  G NFT  +  R
Sbjct: 387 FTWGKGANGRLGHGDIEDRKI--PTLVEVLRDRGVRHIACGANFTAAICQR 435


>gi|47212325|emb|CAF91263.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 416

 Score = 77.8 bits (190), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 105/234 (44%), Gaps = 15/234 (6%)

Query: 122 HTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           H+LLI+    ++S G +  G LGHG +T +  +   I   +   VV  +   NH   +  
Sbjct: 66  HSLLITAEGKLWSWGRNDKGQLGHG-DTKRLEAPKLIEGLADHLVVAAACGRNHTLALTD 124

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            G V++ G+N     G       +  P L+ +  G P  +V  G  F+  +  +G++++ 
Sbjct: 125 DGSVYSFGENKLGQLGQGSQTYAVLSPALI-SYDGQPLVKVACGAEFSMVVDCKGNLYSF 183

Query: 241 GSNTHGQLGH---GDTLDRP---------TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
           G   +GQLGH   G  + R           P+ IA   E     Q+   P+ +L +    
Sbjct: 184 GCPEYGQLGHNSDGKFIARAQRIEFDCEIIPRRIAIFIEKSKDGQVMPVPNVVLVLDSQK 243

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            V+S+G G    LGH EQ DE+ PR I+ F   G    ++  G +   A+  +G
Sbjct: 244 RVFSWGFGGYGRLGHAEQKDEMVPRLIKLFDFPGRGASQIYTGYQCSFAVSENG 297


>gi|219847608|ref|YP_002462041.1| chromosome condensation regulator RCC1 [Chloroflexus aggregans DSM
           9485]
 gi|219541867|gb|ACL23605.1| regulator of chromosome condensation RCC1 [Chloroflexus aggregans
           DSM 9485]
          Length = 778

 Score = 77.8 bits (190), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 70/216 (32%), Positives = 98/216 (45%), Gaps = 11/216 (5%)

Query: 116 ITTGRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  GR+HT  L S+  V+  G++  G LG G  T +         PS   V  ++A   H
Sbjct: 569 IAAGRFHTCALTSSGGVWCWGANFDGQLGDGTTTNRTTPVAVSGLPSG--VTAIAAGGWH 626

Query: 175 AAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEAL-KGVPCKQVTAGLNFTGFLT 232
              +  SG+V+  GDN     G    TNR    P  V  L  GV    + AG   T  LT
Sbjct: 627 TCALTSSGEVWCWGDNYYGQLGDGTTTNRST--PGAVSGLPSGV--TAIAAGWEHTCALT 682

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G V   G N +GQLG G T +R TP +++ L     V  IAAG  +  A+TG+G V  
Sbjct: 683 SSGEVWCWGDNYYGQLGDGTTTNRSTPGAVSGLPS--GVTAIAAGVYHTCALTGSGGVMC 740

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 328
           +G+  +  LG G       P  + T    G+++  +
Sbjct: 741 WGNNGDGQLGDGRPLYRTTPVDVVTSASWGVYLPMI 776



 Score = 74.3 bits (181), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 75/239 (31%), Positives = 103/239 (43%), Gaps = 17/239 (7%)

Query: 111 AGNMQITTGRYHTLLISNSSVFSC-GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G   I  G YHT  ++ S    C G++  G LG+G    +         PS   V  ++
Sbjct: 104 SGVTAIAAGNYHTCALTGSGGVRCWGANYSGQLGNGLTFGRSTPGAVSGLPSG--VTAIA 161

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP--CKQVTAGLN 226
           A  +H   ++ SG V   GDN     G    TNR     R   A+ G+P     + AG  
Sbjct: 162 AGGDHTCALMSSGGVMCWGDNYYGQLGDGTTTNR-----RTPVAVSGLPSGVTAIAAGGL 216

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            T  LT  G V   G N +GQLG G  T  R TP ++  L     +  IAAG  +  A+ 
Sbjct: 217 HTCALTGSGEVWCWGYNYYGQLGDGTTTYSRSTPAAVGGLPS--GMTAIAAGGLHTCALM 274

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            +G V+ +G   +  LG G   D   P A+         V  ++AGD H  AL  SG V
Sbjct: 275 SSGGVWCWGRNDSGQLGDGSDTDSSTPVAVSGLPSG---VTAIAAGDYHTCALTGSGEV 330



 Score = 71.6 bits (174), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 75/237 (31%), Positives = 105/237 (44%), Gaps = 14/237 (5%)

Query: 111 AGNMQITTGRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G   I  G  HT  L+S+  V+  G +  G LG G +T             A+ V  ++
Sbjct: 411 SGVTAIAAGGLHTCALMSSGGVWCWGLNNSGQLGDGSDTDSSTPVAVSGL--ASGVETIA 468

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVP--CKQVTAGLNF 227
           A   H   +  SG V+  G N+S   G       I+    V A+ G+P     + AG   
Sbjct: 469 AGGWHTCALTSSGGVWCWGRNNS---GQLGDGSTIYHITPV-AVSGLPSGVTAIAAGDYH 524

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           T  LT  G V   G N  GQLG G T DR TP +++ L     V  IAAG  +  A+T +
Sbjct: 525 TCALTGSGGVWCWGYNLSGQLGDGTTTDRSTPVAVSGLTS--GVTVIAAGRFHTCALTSS 582

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G V+ +G+  +  LG G   +   P A+         V  ++AG  H  AL SSG V
Sbjct: 583 GGVWCWGANFDGQLGDGTTTNRTTPVAVSGLPSG---VTAIAAGGWHTCALTSSGEV 636



 Score = 71.6 bits (174), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 72/233 (30%), Positives = 99/233 (42%), Gaps = 16/233 (6%)

Query: 116 ITTGRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G +HT  L S+  V+  G +  G LG G              PS   V  ++A + H
Sbjct: 467 IAAGGWHTCALTSSGGVWCWGRNNSGQLGDGSTIYHITPVAVSGLPSG--VTAIAAGDYH 524

Query: 175 AAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
              +  SG V+  G N S   G     D + P+    L   +       + AG   T  L
Sbjct: 525 TCALTGSGGVWCWGYNLSGQLGDGTTTDRSTPVAVSGLTSGVT-----VIAAGRFHTCAL 579

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           T  G V   G+N  GQLG G T +R TP +++ L     V  IAAG  +  A+T +G V+
Sbjct: 580 TSSGGVWCWGANFDGQLGDGTTTNRTTPVAVSGLPS--GVTAIAAGGWHTCALTSSGEVW 637

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            +G      LG G   +   P A+         V  ++AG EH  AL SSG V
Sbjct: 638 CWGDNYYGQLGDGTTTNRSTPGAVSGLPSG---VTAIAAGWEHTCALTSSGEV 687



 Score = 67.8 bits (164), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 98/237 (41%), Gaps = 13/237 (5%)

Query: 111 AGNMQITTGRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G   I  G  HT  L+S+  V   G +  G LG G  T +         PS   V  ++
Sbjct: 155 SGVTAIAAGGDHTCALMSSGGVMCWGDNYYGQLGDGTTTNRRTPVAVSGLPSG--VTAIA 212

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ--VTAGLNF 227
           A   H   +  SG+V+  G N     G   T      P    A+ G+P     + AG   
Sbjct: 213 AGGLHTCALTGSGEVWCWGYNYYGQLGDGTTTYSRSTP---AAVGGLPSGMTAIAAGGLH 269

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           T  L   G V   G N  GQLG G   D  TP +++ L     V  IAAG  +  A+TG+
Sbjct: 270 TCALMSSGGVWCWGRNDSGQLGDGSDTDSSTPVAVSGLPS--GVTAIAAGDYHTCALTGS 327

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G V+ +G      LG G       P A+         V  ++AGD H  AL SSG V
Sbjct: 328 GEVWCWGGNGFGQLGDGTTTARSTPAAVSGLPSG---VETIAAGDYHTCALMSSGGV 381



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 72/241 (29%), Positives = 104/241 (43%), Gaps = 21/241 (8%)

Query: 111 AGNMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPET-TQCVSFTRINFPSAAHVVQV 168
           +G   I  G  HT  ++ S  V+  G +  G LG G  T ++         PS   +  +
Sbjct: 206 SGVTAIAAGGLHTCALTGSGEVWCWGYNYYGQLGDGTTTYSRSTPAAVGGLPSG--MTAI 263

Query: 169 SASENHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVP--CKQVTA 223
           +A   H   ++ SG V+  G N S   G     D++ P+       A+ G+P     + A
Sbjct: 264 AAGGLHTCALMSSGGVWCWGRNDSGQLGDGSDTDSSTPV-------AVSGLPSGVTAIAA 316

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G   T  LT  G V   G N  GQLG G T  R TP +++ L     V  IAAG  +  A
Sbjct: 317 GDYHTCALTGSGEVWCWGGNGFGQLGDGTTTARSTPAAVSGLPS--GVETIAAGDYHTCA 374

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           +  +G V+ +G  ++  LG G       P A+         V  ++AG  H  AL SSG 
Sbjct: 375 LMSSGGVWCWGRNNSGQLGDGTTTARSTPAAVSGLPSG---VTAIAAGGLHTCALMSSGG 431

Query: 344 V 344
           V
Sbjct: 432 V 432



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 57/182 (31%), Positives = 76/182 (41%), Gaps = 11/182 (6%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVP--CKQVT 222
           V  ++A   H   +  SG V   G N  F  G      P  R     A+ G+P     + 
Sbjct: 55  VTAIAAGGAHTCALTGSGGVMCWGGND-F--GQLGDGTPTTR-STPGAVSGLPSGVTAIA 110

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
           AG   T  LT  G V   G+N  GQLG+G T  R TP +++ L     V  IAAG  +  
Sbjct: 111 AGNYHTCALTGSGGVRCWGANYSGQLGNGLTFGRSTPGAVSGLPS--GVTAIAAGGDHTC 168

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           A+  +G V  +G      LG G   +   P A+         V  ++AG  H  AL  SG
Sbjct: 169 ALMSSGGVMCWGDNYYGQLGDGTTTNRRTPVAVSGLPSG---VTAIAAGGLHTCALTGSG 225

Query: 343 YV 344
            V
Sbjct: 226 EV 227


>gi|380029875|ref|XP_003698590.1| PREDICTED: uncharacterized protein LOC100869963 [Apis florea]
          Length = 1858

 Score = 77.8 bits (190), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 54/182 (29%), Positives = 93/182 (51%), Gaps = 5/182 (2%)

Query: 114  MQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
            + ++ G  HTL ++N+ V++ GSS  G LG G +  QC +   I   +   ++   A + 
Sbjct: 874  LSVSCGHCHTLAVTNNGVYAWGSSQFGQLGLG-KILQCSTPELITSLAQEVIIDAVAGQY 932

Query: 174  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
            H+  +   G+VFT G       GH +T++ +  P LV +L G+  + +TAG   T  L+ 
Sbjct: 933  HSVALTSDGRVFTWGWGVHGQLGHGNTDKKM-TPTLVTSLLGIVIRFITAGHAHTLALST 991

Query: 234  RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
             G ++  G N  GQLG G+ +    P  ++  E    ++ IA G  + LAV+    +Y +
Sbjct: 992  EGIIYAFGCNIFGQLGVGNNIKSSVPIKVSLSER---IILIATGYFHNLAVSCTNKLYIW 1048

Query: 294  GS 295
            G+
Sbjct: 1049 GA 1050



 Score = 71.6 bits (174), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 70/234 (29%), Positives = 107/234 (45%), Gaps = 21/234 (8%)

Query: 116  ITTGRYHTLLISNSSVFSCGSSLCGVLGHGPE-----TTQCVSFTRINFPSAAHVVQVSA 170
            +  G  H  LI N +V++ GSS+ G LG GP      + Q +SF  I       V+ VS 
Sbjct: 822  LCAGFSHVALIRNGNVYTWGSSVQGCLGTGPSVLRYGSPQVISFFWI---MEIEVLSVSC 878

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPI--FRPRLVEALKGVPCKQVTAGLNFT 228
               H   V  +G V+  G +S F  G     + +    P L+ +L         AG   +
Sbjct: 879  GHCHTLAVTNNG-VYAWG-SSQF--GQLGLGKILQCSTPELITSLAQEVIIDAVAGQYHS 934

Query: 229  GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGN 287
              LT  G V T G   HGQLGHG+T  + TP  +  L  +G V++ I AG ++ LA++  
Sbjct: 935  VALTSDGRVFTWGWGVHGQLGHGNTDKKMTPTLVTSL--LGIVIRFITAGHAHTLALSTE 992

Query: 288  GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
            G++Y+FG      LG G       P  +    R    ++ ++ G  H +A+  +
Sbjct: 993  GIIYAFGCNIFGQLGVGNNIKSSVPIKVSLSER----IILIATGYFHNLAVSCT 1042


>gi|312622781|ref|YP_004024394.1| regulator of chromosome condensation rcc1 [Caldicellulosiruptor
           kronotskyensis 2002]
 gi|312203248|gb|ADQ46575.1| regulator of chromosome condensation RCC1 [Caldicellulosiruptor
           kronotskyensis 2002]
          Length = 743

 Score = 77.8 bits (190), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 108/231 (46%), Gaps = 14/231 (6%)

Query: 119 GRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 177
           G  HTL I +  +V++ G +  G LG+G     C+    +       VV VSA   H+  
Sbjct: 50  GSLHTLAIKDDGTVWAWGYNGFGQLGNGTYKDSCIP---VRVKGLKDVVAVSAGTFHSLA 106

Query: 178 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
           + + G V+  G ++++     D  R    P  V+ LK +    + AG +F+  +   G V
Sbjct: 107 LKKDGSVWIWG-HTNYGQRKSDVYRDFTTPVKVKELKNIVA--IAAGWDFSLAVGSDGSV 163

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
              G N HG+LG G       P  +  L++V   V ++AG  + LA+  +G V+S+G   
Sbjct: 164 WAWGINNHGELGIGSLKPSAVPVKVKGLKDV---VAVSAGLYHSLALKRDGTVWSWGYNE 220

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGI-HVVRVSAGDEHVVALDSSGYVSLC 347
           +  LG+    D      +   R KG+  V+ +SAG  H +AL+  G V + 
Sbjct: 221 DGELGNRPTEDYTVSVPV---RVKGLSDVIAISAGGFHSIALNKDGAVWIW 268



 Score = 72.0 bits (175), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 65/236 (27%), Positives = 108/236 (45%), Gaps = 17/236 (7%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + I+ G +H++ L  + +V+  G    G++    +        RI + +   VV ++A  
Sbjct: 247 IAISAGGFHSIALNKDGAVWIWGG---GIIEKNGKIDNSYIPVRIRWLN--KVVAIAAGY 301

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +   G V+  G NS    G  +     F P  V+ LK V    V AG   +  LT
Sbjct: 302 RHSIALKDDGTVWVWGHNSYGVLGS-NVGEHSFLPVQVKGLKNVVA--VAAGRLHSVALT 358

Query: 233 IRGHVHTCGSNTHGQLG-HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
             G +   G+N  GQLG   ++     P  +  L+   +VV IAAG S+ LA+  +G V+
Sbjct: 359 KNGTIWAWGNNAFGQLGRENNSFSLNLPYKVKWLD---NVVAIAAGGSHTLAIKRDGTVW 415

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSLC 347
           S+G+ +   LG+G       P  ++   +     V V AG +H +A+D  G V + 
Sbjct: 416 SWGANNKGQLGNGTYKSSYIPTCVKGLNK----AVLVEAGSQHSLAVDKDGTVWVW 467



 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 77/311 (24%), Positives = 135/311 (43%), Gaps = 34/311 (10%)

Query: 44  GSHGLYPQKFRSLVDLAASQLCALHSIYAGMSRNVQIEL--------LNRCNGNWKRVLR 95
           G H   P + + L ++ A     LHS+   +++N  I          L R N ++   L 
Sbjct: 329 GEHSFLPVQVKGLKNVVAVAAGRLHSV--ALTKNGTIWAWGNNAFGQLGRENNSFS--LN 384

Query: 96  FLQSVEHSSDIVETSAGNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSF 154
               V+   ++V  +AG         HTL I  + +V+S G++  G LG+G   T   S+
Sbjct: 385 LPYKVKWLDNVVAIAAGGS-------HTLAIKRDGTVWSWGANNKGQLGNG---TYKSSY 434

Query: 155 TRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK 214
                      V V A   H+  V + G V+  G   S         + I  P  ++  K
Sbjct: 435 IPTCVKGLNKAVLVEAGSQHSLAVDKDGTVWVWGFIESVWS--EKNTKDILSPLPIKIGK 492

Query: 215 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 274
                ++  GL++   L   G++  CG++ + +     ++   T   +  L+ + +V  I
Sbjct: 493 LNDITEIAGGLDYILVLRKDGNIWGCGNDFYFRKFTDSSVSSVTK--LIRLDNIKNVRSI 550

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH-VVRVSAGDE 333
           AAG  + LAV  +G V+S+G  +   L + E++     + ++    KG+  VV+V+AG  
Sbjct: 551 AAGYFHSLAVRTDGTVWSWGDTN---LDNKEKYLNFSEKPVKI---KGLSGVVKVAAGKY 604

Query: 334 HVVALDSSGYV 344
           H +AL   G V
Sbjct: 605 HSLALKKDGTV 615



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 62/248 (25%), Positives = 103/248 (41%), Gaps = 27/248 (10%)

Query: 104 SDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA 163
           +DI E + G        Y  +L  + +++ CG+            +      R++  +  
Sbjct: 494 NDITEIAGGL------DYILVLRKDGNIWGCGNDFYFRKFTDSSVSSVTKLIRLD--NIK 545

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF----RPRLVEALKGVPCK 219
           +V  ++A   H+  V   G V++ GD       + D          +P  ++ L GV   
Sbjct: 546 NVRSIAAGYFHSLAVRTDGTVWSWGDT------NLDNKEKYLNFSEKPVKIKGLSGVV-- 597

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
           +V AG   +  L   G V + G N +GQLG+G       P  +  L    +VV IAAG  
Sbjct: 598 KVAAGKYHSLALKKDGTVWSWGYNAYGQLGNGTRETSFVPVRVKGLN---NVVAIAAGDY 654

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
           + +A+  +G V+ +GS     LG         P  ++       +VV ++AGD H VAL 
Sbjct: 655 HSMALKKDGTVWVWGSNIRGQLGRRNIEFSTVPLKVEKLD----NVVAIAAGDTHSVALK 710

Query: 340 SSGYVSLC 347
             G V + 
Sbjct: 711 KDGTVWVW 718



 Score = 52.0 bits (123), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 57/182 (31%), Positives = 83/182 (45%), Gaps = 12/182 (6%)

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
            V+   A   H   +   G V+  G N     G+  T +    P  V+ LK V    V+A
Sbjct: 43  KVISSGAGSLHTLAIKDDGTVWAWGYNGFGQLGN-GTYKDSCIPVRVKGLKDVVA--VSA 99

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G   +  L   G V   G   +GQ       D  TP     ++E+ ++V IAAG  + LA
Sbjct: 100 GTFHSLALKKDGSVWIWGHTNYGQRKSDVYRDFTTP---VKVKELKNIVAIAAGWDFSLA 156

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH-VVRVSAGDEHVVALDSSG 342
           V  +G V+++G  ++  LG G     L+P A+   + KG+  VV VSAG  H +AL   G
Sbjct: 157 VGSDGSVWAWGINNHGELGIG----SLKPSAVPV-KVKGLKDVVAVSAGLYHSLALKRDG 211

Query: 343 YV 344
            V
Sbjct: 212 TV 213


>gi|355694504|gb|AER99691.1| hect domain and RLD 6 [Mustela putorius furo]
          Length = 1014

 Score = 77.8 bits (190), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 62/188 (32%), Positives = 93/188 (49%), Gaps = 7/188 (3%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++ G +H+L +S +  +F+ GS+  G LG G E     S  R+ F     + QV+A  
Sbjct: 131 IQVSCGHHHSLALSEDGRLFTWGSNSHGQLGLGKECPSQASPQRVQFLDGIPLTQVAAGG 190

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF---RPRLVEALKGVPCKQVTAGLNFTG 229
            H+  +  SG  F  G NS      R  N P+    +P  V+AL+ +    ++ G   T 
Sbjct: 191 AHSFALSLSGASFGWGSNSEGQLALRKKNVPVVQSSKPCSVDALENLGVVYISCGYEHTA 250

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA-VTGNG 288
            LT  G V T G N++GQLG+  T  +  P+ +  ++  G V QI  G  + LA V   G
Sbjct: 251 VLTQTGKVFTFGGNSYGQLGYSPTAGKEGPQLVEGID--GLVSQIDCGSYHTLAYVYTTG 308

Query: 289 VVYSFGSG 296
            V SFG G
Sbjct: 309 KVVSFGRG 316



 Score = 74.3 bits (181), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 53/182 (29%), Positives = 99/182 (54%), Gaps = 6/182 (3%)

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           A + Q ++ E H+  +L +G++ + GDNS    G RD  R   +P+ + AL+ +    V+
Sbjct: 23  AELRQAASGERHSLLLLSNGELHSYGDNSHGQLGRRDVQRQE-QPKRIPALETLRVDLVS 81

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYM 281
            G   +  +  +G V   G+ + GQLG G+  +    P+ I  L ++  ++Q++ G  + 
Sbjct: 82  CGKEHSLAVCYKGRVFAWGAGSEGQLGIGEFNEINLIPRKIKTLTDI-KIIQVSCGHHHS 140

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           LA++ +G ++++GS S+  LG G++   +  P+ +Q     GI + +V+AG  H  AL  
Sbjct: 141 LALSEDGRLFTWGSNSHGQLGLGKECPSQASPQRVQFL--DGIPLTQVAAGGAHSFALSL 198

Query: 341 SG 342
           SG
Sbjct: 199 SG 200



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/145 (35%), Positives = 74/145 (51%), Gaps = 4/145 (2%)

Query: 199 DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT 258
           +TNRP    R      G   +Q  +G   +  L   G +H+ G N+HGQLG  D   +  
Sbjct: 6   NTNRPGPLRRRPAGRGGAELRQAASGERHSLLLLSNGELHSYGDNSHGQLGRRDVQRQEQ 65

Query: 259 PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD-ELQPRAIQT 317
           PK I  LE +  V  ++ G  + LAV   G V+++G+GS   LG GE ++  L PR I+T
Sbjct: 66  PKRIPALETL-RVDLVSCGKEHSLAVCYKGRVFAWGAGSEGQLGIGEFNEINLIPRKIKT 124

Query: 318 FRRKGIHVVRVSAGDEHVVALDSSG 342
                I +++VS G  H +AL   G
Sbjct: 125 L--TDIKIIQVSCGHHHSLALSEDG 147



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 68/236 (28%), Positives = 111/236 (47%), Gaps = 10/236 (4%)

Query: 115 QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q  +G  H+LL+ SN  + S G +  G LG      Q     RI       V  VS  + 
Sbjct: 27  QAASGERHSLLLLSNGELHSYGDNSHGQLGRRDVQRQ-EQPKRIPALETLRVDLVSCGKE 85

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  V   G+VF  G  S    G  + N     PR ++ L  +   QV+ G + +  L+ 
Sbjct: 86  HSLAVCYKGRVFAWGAGSEGQLGIGEFNEINLIPRKIKTLTDIKIIQVSCGHHHSLALSE 145

Query: 234 RGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
            G + T GSN+HGQLG G +   + +P+ +  L+ +  + Q+AAG ++  A++ +G  + 
Sbjct: 146 DGRLFTWGSNSHGQLGLGKECPSQASPQRVQFLDGI-PLTQVAAGGAHSFALSLSGASFG 204

Query: 293 FGSGSNFCLGHGEQHDEL----QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           +GS S   L   +++  +    +P ++      G  VV +S G EH   L  +G V
Sbjct: 205 WGSNSEGQLALRKKNVPVVQSSKPCSVDALENLG--VVYISCGYEHTAVLTQTGKV 258



 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 105/229 (45%), Gaps = 13/229 (5%)

Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           ++ G+ H+L +     VF+ G+   G LG G      +   +I   +   ++QVS   +H
Sbjct: 80  VSCGKEHSLAVCYKGRVFAWGAGSEGQLGIGEFNEINLIPRKIKTLTDIKIIQVSCGHHH 139

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           +  + + G++FT G NS    G          P+ V+ L G+P  QV AG   +  L++ 
Sbjct: 140 SLALSEDGRLFTWGSNSHGQLGLGKECPSQASPQRVQFLDGIPLTQVAAGGAHSFALSLS 199

Query: 235 GHVHTCGSNTHGQLG----HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           G     GSN+ GQL     +   +    P S+  LE +G VV I+ G  +   +T  G V
Sbjct: 200 GASFGWGSNSEGQLALRKKNVPVVQSSKPCSVDALENLG-VVYISCGYEHTAVLTQTGKV 258

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH--VVRVSAGDEHVVA 337
           ++FG  S   LG+     +  P+ ++     GI   V ++  G  H +A
Sbjct: 259 FTFGGNSYGQLGYSPTAGKEGPQLVE-----GIDGLVSQIDCGSYHTLA 302


>gi|326923406|ref|XP_003207927.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Meleagris gallopavo]
          Length = 1048

 Score = 77.8 bits (190), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 97/206 (47%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S  S VFS G +  G LG G E  +  S   I         Q++A  
Sbjct: 140 VQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDDNDR-YVPTLLKSLRTQKVVHICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V QI  G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSLVTQITCGRQHTTAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGTTSNRKSPFTVK 342



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 103/224 (45%), Gaps = 7/224 (3%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKARKRPEHVGALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G  +    G   T   I  PR +++L  +   QV  G   +  L+    V +
Sbjct: 101 DKGQVYAWGLATDGQLGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFS 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G +   + +P  I  L  +    QIAAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGYEYKKQNSPHVIKSLLGI-PFAQIAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
             LG  + +D   P  +++ R +   VV +  G++H  AL   G
Sbjct: 220 GQLGLNDDNDRYVPTLLKSLRTQ--KVVHICCGEDHTAALTKEG 261



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/213 (30%), Positives = 94/213 (44%), Gaps = 9/213 (4%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     +  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 253
             GH    +   RP  V AL       V+ G   T  L  +G V+  G  T GQLG   T
Sbjct: 65  QLGHEKARK---RPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLPGT 121

Query: 254 LD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
            +    P++I  L E+  +VQ+A G  + LA++    V+S+G      LG G E   +  
Sbjct: 122 EECIRVPRNIKSLSEI-QIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           P  I++    GI   +++AG  H   L  SG +
Sbjct: 181 PHVIKSLL--GIPFAQIAAGGAHSFVLTLSGAI 211


>gi|222528951|ref|YP_002572833.1| chromosome condensation regulator RCC1 [Caldicellulosiruptor bescii
           DSM 6725]
 gi|222455798|gb|ACM60060.1| regulator of chromosome condensation RCC1 [Caldicellulosiruptor
           bescii DSM 6725]
          Length = 743

 Score = 77.8 bits (190), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 108/231 (46%), Gaps = 14/231 (6%)

Query: 119 GRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 177
           G  HTL I +  +V++ G +  G LG+G     C+    +       VV VSA   H+  
Sbjct: 50  GSLHTLAIKDDGTVWAWGYNGFGQLGNGTYKDSCIP---VRVKGLKDVVAVSAGTFHSLA 106

Query: 178 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
           + + G V+  G ++++     D  R    P  V+ LK +    + AG +F+  +   G V
Sbjct: 107 LKKDGSVWIWG-HTNYGQRKSDVYRDFTTPVKVKELKNIVA--IAAGWDFSLAVGSDGSV 163

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
              G N HG+LG G       P  +  L++V   V ++AG  + LA+  +G V+S+G   
Sbjct: 164 WAWGINNHGELGIGSLKPSAVPVKVKGLKDV---VAVSAGLYHSLALKRDGTVWSWGYNE 220

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGI-HVVRVSAGDEHVVALDSSGYVSLC 347
           +  LG+    D      +   R KG+  V+ +SAG  H +AL+  G V + 
Sbjct: 221 DGELGNRPTEDYTVSVPV---RVKGLSDVIAISAGGFHSIALNKDGAVWIW 268



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 106/236 (44%), Gaps = 17/236 (7%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + I+ G +H++ L  + +V+  G    G++    +        RI + +   VV ++A  
Sbjct: 247 IAISAGGFHSIALNKDGAVWIWGG---GIIEKNGKIDNSYIPVRIRWLN--KVVAIAAGY 301

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +   G V+  G NS    G  +     F    V+ LK V    V AG   +  LT
Sbjct: 302 RHSIALKDDGTVWVWGHNSYGVLGS-NVGEHSFLLVQVKGLKNVVA--VAAGRLHSVALT 358

Query: 233 IRGHVHTCGSNTHGQLG-HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
             G +   G+N  GQLG   ++     P  +  L+   +VV IA G S+ LA+  +G V+
Sbjct: 359 KNGTIWAWGNNAFGQLGRENNSFSLNLPYKVKWLD---NVVAIATGGSHTLAIKRDGTVW 415

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSLC 347
           S+G+ +   LG+G       P  ++       + V V AG +H +A+D  G V + 
Sbjct: 416 SWGANNKGQLGNGTYKSSYIPTCVKGLN----NAVLVEAGSQHSLAVDKDGTVWVW 467



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 62/248 (25%), Positives = 104/248 (41%), Gaps = 27/248 (10%)

Query: 104 SDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA 163
           +DI E + G        Y  +L  + +++ CG+            +      R++  +  
Sbjct: 494 NDITEIAGGL------DYILVLRKDGNIWGCGNDFYFRKFTDSSVSSVTKLIRLD--NIK 545

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF----RPRLVEALKGVPCK 219
           +V  ++A   H+  V   G V++ GD       + D  +       +P  ++ L GV   
Sbjct: 546 NVRSIAAGYFHSLAVRTDGTVWSWGDT------NLDNKKKYLNFSEKPVKIKGLSGVV-- 597

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
           +V AG   +  L   G V + G N +GQLG+G       P  +  L    +VV IAAG  
Sbjct: 598 KVAAGKYHSLALKKDGTVWSWGYNAYGQLGNGTRETSFVPVRVKGLN---NVVAIAAGDY 654

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
           + +A+  +G V+ +GS     LG         P  ++       +VV ++AGD H VAL 
Sbjct: 655 HSMALKKDGTVWVWGSNIRGQLGRRNIEFSTVPLKVEKLD----NVVAIAAGDTHSVALK 710

Query: 340 SSGYVSLC 347
             G V + 
Sbjct: 711 KDGTVWVW 718



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 61/233 (26%), Positives = 108/233 (46%), Gaps = 15/233 (6%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + I TG  HTL I  + +V+S G++  G LG+G   T   S+         + V V A  
Sbjct: 396 VAIATGGSHTLAIKRDGTVWSWGANNKGQLGNG---TYKSSYIPTCVKGLNNAVLVEAGS 452

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  V + G V+  G   S         + I  P  ++  K     ++  GL++   L 
Sbjct: 453 QHSLAVDKDGTVWVWGFIESVWS--EKNTKDILSPLPIKIGKLNDITEIAGGLDYILVLR 510

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G++  CG++ + +     ++   T   +  L+ + +V  IAAG  + LAV  +G V+S
Sbjct: 511 KDGNIWGCGNDFYFRKFTDSSVSSVTK--LIRLDNIKNVRSIAAGYFHSLAVRTDGTVWS 568

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH-VVRVSAGDEHVVALDSSGYV 344
           +G  +   L + +++     + ++    KG+  VV+V+AG  H +AL   G V
Sbjct: 569 WGDTN---LDNKKKYLNFSEKPVKI---KGLSGVVKVAAGKYHSLALKKDGTV 615



 Score = 52.0 bits (123), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 57/182 (31%), Positives = 83/182 (45%), Gaps = 12/182 (6%)

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
            V+   A   H   +   G V+  G N     G+  T +    P  V+ LK V    V+A
Sbjct: 43  KVISSGAGSLHTLAIKDDGTVWAWGYNGFGQLGN-GTYKDSCIPVRVKGLKDVVA--VSA 99

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G   +  L   G V   G   +GQ       D  TP     ++E+ ++V IAAG  + LA
Sbjct: 100 GTFHSLALKKDGSVWIWGHTNYGQRKSDVYRDFTTP---VKVKELKNIVAIAAGWDFSLA 156

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH-VVRVSAGDEHVVALDSSG 342
           V  +G V+++G  ++  LG G     L+P A+   + KG+  VV VSAG  H +AL   G
Sbjct: 157 VGSDGSVWAWGINNHGELGIG----SLKPSAVPV-KVKGLKDVVAVSAGLYHSLALKRDG 211

Query: 343 YV 344
            V
Sbjct: 212 TV 213


>gi|449442447|ref|XP_004138993.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101222790 [Cucumis sativus]
          Length = 982

 Score = 77.8 bits (190), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 51/166 (30%), Positives = 80/166 (48%), Gaps = 5/166 (3%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           HA  V + G++F+ G+ S    GH      +  P++++ L G   + V  G   T  +T+
Sbjct: 301 HAVLVTRQGEIFSWGEESGGRLGH-GVEADVSHPKIIDTLSGTNVELVACGEYHTCAVTL 359

Query: 234 RGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++T G  TH  G LGHG  +    P+ +    E   V  I+ G  +   VT  G ++
Sbjct: 360 SGDLYTWGDGTHNYGLLGHGSEVSHWIPQKVGGQMEGIRVSYISCGAWHTAVVTSAGQLF 419

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           +FG GS   LGHG+      PR ++T R  G+   +V+ G  H  A
Sbjct: 420 TFGDGSFGALGHGDHITSNFPREVETLR--GLRTTKVACGVWHTAA 463



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 79/264 (29%), Positives = 113/264 (42%), Gaps = 23/264 (8%)

Query: 100 VEHSSDIVETSAGNMQITT-GRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFT 155
           V H   I   S  N+++   G YHT  ++ S     +  G+   G+LGHG E +  +   
Sbjct: 330 VSHPKIIDTLSGTNVELVACGEYHTCAVTLSGDLYTWGDGTHNYGLLGHGSEVSHWIPQK 389

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
                    V  +S    H A V  +GQ+FT GD S    GH D     F PR VE L+G
Sbjct: 390 VGGQMEGIRVSYISCGAWHTAVVTSAGQLFTFGDGSFGALGHGDHITSNF-PREVETLRG 448

Query: 216 VPCKQVTAGLNFTGF-------LTIRG--------HVHTCGSNTHGQLGHGDTLDRPTPK 260
           +   +V  G+  T         L+  G         ++T G    G+LGHGD   R  P+
Sbjct: 449 LRTTKVACGVWHTAAAVEAINELSDSGTSASPSSRKLYTWGDGDKGRLGHGDNEPRLVPE 508

Query: 261 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR 320
            +A L E   + Q+A G    +A+T  G VY+ GS +   LG    + +L P  ++    
Sbjct: 509 CVAALIEE-RICQVACGNDLTVALTTAGRVYTMGSTAYGQLGSATANGKL-PTCVEGEIA 566

Query: 321 KGIHVVRVSAGDEHVVALDSSGYV 344
               V  V+ G  HV  L S   V
Sbjct: 567 NSF-VEEVACGSYHVAVLTSKNEV 589



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 69/245 (28%), Positives = 112/245 (45%), Gaps = 19/245 (7%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGP----------ETTQCVSFTRIN---FPS 161
           I+ G +HT +++++  +F+ G    G LGHG           ET + +  T++    + +
Sbjct: 402 ISCGAWHTAVVTSAGQLFTFGDGSFGALGHGDHITSNFPREVETLRGLRTTKVACGVWHT 461

Query: 162 AAHVVQVSA-SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
           AA V  ++  S++  +    S +++T GD      GH D N P   P  V AL      Q
Sbjct: 462 AAAVEAINELSDSGTSASPSSRKLYTWGDGDKGRLGHGD-NEPRLVPECVAALIEERICQ 520

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           V  G + T  LT  G V+T GS  +GQLG   T +   P  +        V ++A G  +
Sbjct: 521 VACGNDLTVALTTAGRVYTMGSTAYGQLGSA-TANGKLPTCVEGEIANSFVEEVACGSYH 579

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           +  +T    VY++G G N  LGHG+ +    P  +   + K   V  V+ G +  V +  
Sbjct: 580 VAVLTSKNEVYTWGKGLNGQLGHGDNNHRNTPTIVDVLKDK--QVKNVACGSKFTVVICI 637

Query: 341 SGYVS 345
             +VS
Sbjct: 638 HKWVS 642



 Score = 68.2 bits (165), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 63/243 (25%), Positives = 105/243 (43%), Gaps = 21/243 (8%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAF 177
           GR+  L+     +FS G    G LGHG E    VS  + I+  S  +V  V+  E H   
Sbjct: 299 GRHAVLVTRQGEIFSWGEESGGRLGHGVEAD--VSHPKIIDTLSGTNVELVACGEYHTCA 356

Query: 178 VLQSGQVFTCGDNSSF--CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 235
           V  SG ++T GD +      GH          ++   ++G+    ++ G   T  +T  G
Sbjct: 357 VTLSGDLYTWGDGTHNYGLLGHGSEVSHWIPQKVGGQMEGIRVSYISCGAWHTAVVTSAG 416

Query: 236 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS------VVQIAAGPSYMLAVTGNGV 289
            + T G  + G LGHGD +    P+ +  L  + +      V   AA    +  ++ +G 
Sbjct: 417 QLFTFGDGSFGALGHGDHITSNFPREVETLRGLRTTKVACGVWHTAAAVEAINELSDSGT 476

Query: 290 --------VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
                   +Y++G G    LGHG+    L P  +     +   + +V+ G++  VAL ++
Sbjct: 477 SASPSSRKLYTWGDGDKGRLGHGDNEPRLVPECVAALIEE--RICQVACGNDLTVALTTA 534

Query: 342 GYV 344
           G V
Sbjct: 535 GRV 537



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 70/139 (50%), Gaps = 6/139 (4%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E+   +    +  G      +T +G + + G  + G+LGHG   D   PK I  L 
Sbjct: 281 PKALESTVVLDVHGIACGGRHAVLVTRQGEIFSWGEESGGRLGHGVEADVSHPKIIDTLS 340

Query: 267 EVGSVVQ-IAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPRAIQTFRRKGI 323
             G+ V+ +A G  +  AVT +G +Y++G G+ N+  LGHG +     P+ +   + +GI
Sbjct: 341 --GTNVELVACGEYHTCAVTLSGDLYTWGDGTHNYGLLGHGSEVSHWIPQKVGG-QMEGI 397

Query: 324 HVVRVSAGDEHVVALDSSG 342
            V  +S G  H   + S+G
Sbjct: 398 RVSYISCGAWHTAVVTSAG 416


>gi|442319025|ref|YP_007359046.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
 gi|441486667|gb|AGC43362.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
          Length = 746

 Score = 77.8 bits (190), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 70/236 (29%), Positives = 107/236 (45%), Gaps = 15/236 (6%)

Query: 109 TSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV 168
           TS   ++   G Y     ++ S++  G +  G LG G  T++   ++ I  P  + V  V
Sbjct: 96  TSVTAVEAGRGNYSMARRADGSLWVWGYNTYGQLGDGTTTSR---WSPIPVPGFSGVSSV 152

Query: 169 SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
           S    H+  +   G V+  G N+    G   T +   R   V AL       V+AG +F+
Sbjct: 153 SGGYMHSMALKSDGTVWAWGRNADGQLGDGSTTQ---RLSPVRALGLSLVTSVSAGYDFS 209

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
             L   G V T G NT G+LG+G   DR TP  +  L     VV + AG S+++AV  +G
Sbjct: 210 AALKADGTVWTWGDNTDGELGNGTLTDRLTPAQVPGLT---GVVFLMAGHSHVMAVKSDG 266

Query: 289 VVYSFGSGSNFCLGHGEQHD--ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            V+ +G      LG GE     +L P  +    +    V  V +G+ + VAL + G
Sbjct: 267 TVWVWGRNDWGVLGLGEGAPIRQLTPTQVPGISQ----VAFVDSGEHYTVALKTDG 318



 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 62/232 (26%), Positives = 93/232 (40%), Gaps = 13/232 (5%)

Query: 112 GNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
           G + + +G  H L   S+ +V++ G +  G LG G  T    S   I  P    V  V+A
Sbjct: 449 GAVSVASGANHALAAKSDGTVWAWGGNGSGQLGDGSTT---ASLIPIQVPGLTGVAAVAA 505

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            +  +  +   G ++  G NSS       T      P LV    GV       G +    
Sbjct: 506 GDGFSLALKSDGTLWAWGRNSSGSL-GDGTTTGRTTPALVPNFTGVKAVATAPGADHVLA 564

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           L   G +   G N++GQLG G  L + +P  +     +  V+ IA G  + L V   G V
Sbjct: 565 LKTNGTLWAWGGNSYGQLGDGSVLRKLSPVFV----NLTGVLSIATGSDHSLVVRTGGAV 620

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           +++G      LG G       P  +Q           ++AGD H + L S G
Sbjct: 621 WTWGRNDAAQLGDGTGTTRTLPVQVQGV----TGATALAAGDRHSLMLRSDG 668



 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 62/230 (26%), Positives = 97/230 (42%), Gaps = 19/230 (8%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           + +G ++T+ L ++ +++  G +  G LG G   T  V +     P    V  +     H
Sbjct: 304 VDSGEHYTVALKTDGTLWGWGYNNYGQLGEG---TGGVKYLPTQLPGLTQVATLGVGRYH 360

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           A  + Q G  +  G + ++   + +  RP     +     G    +   GL  T  L   
Sbjct: 361 AMAIKQDGTAWAWGLHDAYQ--YANVTRPDSAVAVATQFTG--ALRPVGGLYETLVLKAD 416

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG--SVVQIAAGPSYMLAVTGNGVVYS 292
           G V   G N  GQLG G    R     + P + VG    V +A+G ++ LA   +G V++
Sbjct: 417 GTVWGAGRNGSGQLGDGSGTQR-----VVPAQAVGLTGAVSVASGANHALAAKSDGTVWA 471

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           +G   +  LG G     L P  IQ     G  V  V+AGD   +AL S G
Sbjct: 472 WGGNGSGQLGDGSTTASLIP--IQVPGLTG--VAAVAAGDGFSLALKSDG 517



 Score = 55.1 bits (131), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 56/203 (27%), Positives = 92/203 (45%), Gaps = 17/203 (8%)

Query: 119 GRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 177
           G  H L L +N ++++ G +  G LG G    + +S   +N      V+ ++   +H+  
Sbjct: 558 GADHVLALKTNGTLWAWGGNSYGQLGDG-SVLRKLSPVFVNL---TGVLSIATGSDHSLV 613

Query: 178 VLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
           V   G V+T G N +   G    T R +  P  V+ + G     + AG   +  L   G 
Sbjct: 614 VRTGGAVWTWGRNDAAQLGDGTGTTRTL--PVQVQGVTG--ATALAAGDRHSLMLRSDGT 669

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
           +   GSN+ G+LG G    RP P  + AP      VV ++AG  + LA+T +G V+++  
Sbjct: 670 LWAWGSNSEGELGDGTMTGRPLPVRVRAPA----GVVALSAGARHSLAMTPDGTVWAW-- 723

Query: 296 GSNFCLGHGEQHDELQPRAIQTF 318
           G N    HG      +   +Q +
Sbjct: 724 GLNLFGQHGNNKWGFKTTPVQQW 746



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 75/172 (43%), Gaps = 13/172 (7%)

Query: 174 HAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           +   VL++ G V+  G N S   G     + +  P     L G     V +G N      
Sbjct: 408 YETLVLKADGTVWGAGRNGSGQLGDGSGTQRVV-PAQAVGLTG--AVSVASGANHALAAK 464

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG--SVVQIAAGPSYMLAVTGNGVV 290
             G V   G N  GQLG G T       S+ P++  G   V  +AAG  + LA+  +G +
Sbjct: 465 SDGTVWAWGGNGSGQLGDGSTT-----ASLIPIQVPGLTGVAAVAAGDGFSLALKSDGTL 519

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           +++G  S+  LG G       P  +  F   G+  V  + G +HV+AL ++G
Sbjct: 520 WAWGRNSSGSLGDGTTTGRTTPALVPNF--TGVKAVATAPGADHVLALKTNG 569



 Score = 44.3 bits (103), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 44/176 (25%), Positives = 75/176 (42%), Gaps = 11/176 (6%)

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           +   L ++ +V++ G +  G LG+G  T +    T    P    VV + A  +H   V  
Sbjct: 208 FSAALKADGTVWTWGDNTDGELGNGTLTDR---LTPAQVPGLTGVVFLMAGHSHVMAVKS 264

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPI--FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
            G V+  G N     G  +   PI    P  V  +  V    V +G ++T  L   G + 
Sbjct: 265 DGTVWVWGRNDWGVLGLGE-GAPIRQLTPTQVPGISQVAF--VDSGEHYTVALKTDGTLW 321

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
             G N +GQLG G    +  P  +  L +V +   +  G  + +A+  +G  +++G
Sbjct: 322 GWGYNNYGQLGEGTGGVKYLPTQLPGLTQVAT---LGVGRYHAMAIKQDGTAWAWG 374



 Score = 40.0 bits (92), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 51/115 (44%), Gaps = 6/115 (5%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
           +L   G V + G+N  G+LG G    R TP  +  L  V + V+   G +Y +A   +G 
Sbjct: 60  WLKPDGTVWSWGTNYGGELGDGTHNHRSTPAQVPNLTSV-TAVEAGRG-NYSMARRADGS 117

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           ++ +G  +   LG G       P  +  F      V  VS G  H +AL S G V
Sbjct: 118 LWVWGYNTYGQLGDGTTTSRWSPIPVPGFS----GVSSVSGGYMHSMALKSDGTV 168


>gi|157129109|ref|XP_001661612.1| hypothetical protein AaeL_AAEL011344 [Aedes aegypti]
 gi|108872360|gb|EAT36585.1| AAEL011344-PA [Aedes aegypti]
          Length = 803

 Score = 77.8 bits (190), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 62/214 (28%), Positives = 99/214 (46%), Gaps = 2/214 (0%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           T G +   ++ + SVF+ G    G LGH    T     T+++     +VV V+       
Sbjct: 425 TNGAHFVAVMYDGSVFTWGEGNKGQLGHNALETWRHYPTKVDAIQRYNVVGVATGNGFTL 484

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
           F    G V +CGDNSS C GH +    +  P++V+ L  +  +QV  G      L+  GH
Sbjct: 485 FWTNLGVVLSCGDNSSGCLGHGN-QISLLVPKIVQKLNNIRIRQVACGSQHVVALSDGGH 543

Query: 237 VHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
           ++T GS+  G LG G  +   T P+ +   + + ++ +I  GP   + +T  G  Y  GS
Sbjct: 544 LYTWGSSNDGALGLGKQMLVSTEPRRLIISQMIQNIREIYCGPDCTVILTEGGSCYCCGS 603

Query: 296 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
             +  LG G +  +L      TF  + I  V V+
Sbjct: 604 NRHNRLGFGMKITQLTALQKVTFVAEKILSVSVA 637



 Score = 74.7 bits (182), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 76/154 (49%), Gaps = 1/154 (0%)

Query: 153 SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA 212
           S   +  P    + Q++ +  H   V+  G VFT G+ +    GH         P  V+A
Sbjct: 408 SLIPLQLPPTGKIRQIATNGAHFVAVMYDGSVFTWGEGNKGQLGHNALETWRHYPTKVDA 467

Query: 213 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
           ++      V  G  FT F T  G V +CG N+ G LGHG+ +    PK +  L  +  + 
Sbjct: 468 IQRYNVVGVATGNGFTLFWTNLGVVLSCGDNSSGCLGHGNQISLLVPKIVQKLNNI-RIR 526

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+A G  +++A++  G +Y++GS ++  LG G+Q
Sbjct: 527 QVACGSQHVVALSDGGHLYTWGSSNDGALGLGKQ 560



 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 45/125 (36%), Positives = 65/125 (52%), Gaps = 7/125 (5%)

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD--RPTPKSIAPLEEVGSVVQIAAGPS 279
           T G +F   +   G V T G    GQLGH + L+  R  P  +  ++   +VV +A G  
Sbjct: 425 TNGAHFVAVM-YDGSVFTWGEGNKGQLGH-NALETWRHYPTKVDAIQRY-NVVGVATGNG 481

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
           + L  T  GVV S G  S+ CLGHG Q   L P+ +Q  +   I + +V+ G +HVVAL 
Sbjct: 482 FTLFWTNLGVVLSCGDNSSGCLGHGNQISLLVPKIVQ--KLNNIRIRQVACGSQHVVALS 539

Query: 340 SSGYV 344
             G++
Sbjct: 540 DGGHL 544



 Score = 42.7 bits (99), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 6/92 (6%)

Query: 124 LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 183
           +L    S + CGS+    LG G + TQ  +  ++ F  A  ++ VS +E   AF+++   
Sbjct: 591 ILTEGGSCYCCGSNRHNRLGFGMKITQLTALQKVTF-VAEKILSVSVAETSGAFLIEGNY 649

Query: 184 VFTCGDNSS--FCCGHRDTNRPIFRPRLVEAL 213
           V T G+N++     GH D N     P +V++L
Sbjct: 650 VITTGENNNGQRGLGHPDENG---EPTMVKSL 678



 Score = 39.3 bits (90), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 61/236 (25%), Positives = 93/236 (39%), Gaps = 60/236 (25%)

Query: 116 ITTGRYHTLLISN-SSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPS--AAHV 165
           + TG   TL  +N   V SCG +  G LGHG       P+  Q ++  RI   +  + HV
Sbjct: 476 VATGNGFTLFWTNLGVVLSCGDNSSGCLGHGNQISLLVPKIVQKLNNIRIRQVACGSQHV 535

Query: 166 VQVS--------ASENHAAF-------------------VLQSGQVFTCGDN-------- 190
           V +S         S N  A                    ++Q+ +   CG +        
Sbjct: 536 VALSDGGHLYTWGSSNDGALGLGKQMLVSTEPRRLIISQMIQNIREIYCGPDCTVILTEG 595

Query: 191 -SSFCCGHRDTNRPIFRPRLVE--ALKGV-----PCKQVTAGLNFTGFLTIRGHVHTCGS 242
            S +CCG    NR  F  ++ +  AL+ V         V+       FL    +V T G 
Sbjct: 596 GSCYCCGSNRHNRLGFGMKITQLTALQKVTFVAEKILSVSVAETSGAFLIEGNYVITTGE 655

Query: 243 NTHGQ--LGHGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
           N +GQ  LGH D    PT  KS+        + +I    +YM+A++ +  V  +G+
Sbjct: 656 NNNGQRGLGHPDENGEPTMVKSLMS----RFITKIKCHSTYMVAISDDNCVLFWGT 707


>gi|118092565|ref|XP_001231234.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Gallus
           gallus]
          Length = 1056

 Score = 77.8 bits (190), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 97/206 (47%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S  S VFS G +  G LG G E  +  S   I         Q++A  
Sbjct: 140 VQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDDNDR-YVPTLLKSLRTQKVVHICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V QI  G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSLVTQITCGRQHTTAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGTTSNRKSPFTVK 342



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 103/224 (45%), Gaps = 7/224 (3%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKARKRPEHVGALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G  +    G   T   I  PR +++L  +   QV  G   +  L+    V +
Sbjct: 101 DKGQVYAWGLATDGQLGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFS 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G +   + +P  I  L  +    QIAAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGYEYKKQNSPHVIKSLLGI-PFAQIAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
             LG  + +D   P  +++ R +   VV +  G++H  AL   G
Sbjct: 220 GQLGLNDDNDRYVPTLLKSLRTQ--KVVHICCGEDHTAALTKEG 261



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/213 (30%), Positives = 94/213 (44%), Gaps = 9/213 (4%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     +  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 253
             GH    +   RP  V AL       V+ G   T  L  +G V+  G  T GQLG   T
Sbjct: 65  QLGHEKARK---RPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLPGT 121

Query: 254 LD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
            +    P++I  L E+  +VQ+A G  + LA++    V+S+G      LG G E   +  
Sbjct: 122 EECIRVPRNIKSLSEI-QIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           P  I++    GI   +++AG  H   L  SG +
Sbjct: 181 PHVIKSLL--GIPFAQIAAGGAHSFVLTLSGAI 211


>gi|328783019|ref|XP_395630.4| PREDICTED: hypothetical protein LOC412167, partial [Apis mellifera]
          Length = 854

 Score = 77.8 bits (190), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 108/237 (45%), Gaps = 14/237 (5%)

Query: 119 GRYHTLLIS-NSSVFSCGSSLCGVLGHG----PETTQCVSFTRINFPSAAHVVQVSASEN 173
           GR HTL+ +    +F+CGS   G LG G     ++T        + P+ + +VQ+ A  +
Sbjct: 159 GRAHTLICTVAEKIFACGSDQEGQLGRGISAIGDSTSTPVLIYDSGPTGSKIVQIVAGSH 218

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  +   G VF  G N     G  D +  + +P  V   +  P K++  G   + FLT 
Sbjct: 219 HSLALTSDGNVFAWGSNLEGQLGLPDISGLVNKPTKVHIPE--PVKRINTGYYHSIFLTE 276

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP--LEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G V+ CG +  G+LG    +D      I P  ++    V+ +A G  + + +T N  +Y
Sbjct: 277 NGLVYVCGESESGKLG----IDINFSTQIMPKQMQLPNPVIYVACGGHHTMFLTENNNLY 332

Query: 292 SFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSLC 347
             GS S+  LG G    EL  P+ +     K   + R+S G+ H   L  SG +  C
Sbjct: 333 CTGSNSSGQLGLGTNVTELHTPKLLSQGALKNERISRISCGESHTAILTESGKLYTC 389



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 58/193 (30%), Positives = 88/193 (45%), Gaps = 20/193 (10%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           V+ +S  + H+A + QSG++F  G N       GH++    I +P  V+ LK      V 
Sbjct: 101 VISISCGDEHSAVICQSGRLFVFGSNDWGQLGLGHKNH---ISKPSCVKVLKPEKVTHVA 157

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTL---DRPTPKSIAPLEEVGS-VVQIAAGP 278
            G   T   T+   +  CGS+  GQLG G +       TP  I      GS +VQI AG 
Sbjct: 158 CGRAHTLICTVAEKIFACGSDQEGQLGRGISAIGDSTSTPVLIYDSGPTGSKIVQIVAGS 217

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH----VVRVSAGDEH 334
            + LA+T +G V+++GS     LG       L   +    +   +H    V R++ G  H
Sbjct: 218 HHSLALTSDGNVFAWGSNLEGQLG-------LPDISGLVNKPTKVHIPEPVKRINTGYYH 270

Query: 335 VVALDSSGYVSLC 347
            + L  +G V +C
Sbjct: 271 SIFLTENGLVYVC 283



 Score = 58.2 bits (139), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 68/138 (49%), Gaps = 5/138 (3%)

Query: 115 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           +I TG YH++ L  N  V+ CG S  G LG     +  +   ++  P+   V+ V+   +
Sbjct: 263 RINTGYYHSIFLTENGLVYVCGESESGKLGIDINFSTQIMPKQMQLPNP--VIYVACGGH 320

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE--ALKGVPCKQVTAGLNFTGFL 231
           H  F+ ++  ++  G NSS   G       +  P+L+   ALK     +++ G + T  L
Sbjct: 321 HTMFLTENNNLYCTGSNSSGQLGLGTNVTELHTPKLLSQGALKNERISRISCGESHTAIL 380

Query: 232 TIRGHVHTCGSNTHGQLG 249
           T  G ++TCG   HG+LG
Sbjct: 381 TESGKLYTCGDGRHGKLG 398


>gi|74219054|dbj|BAE26671.1| unnamed protein product [Mus musculus]
          Length = 464

 Score = 77.8 bits (190), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 72/224 (32%), Positives = 104/224 (46%), Gaps = 17/224 (7%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
           +F+ G++  G LG G +    +     +F  A  +  V+    H+A V   G +F CG N
Sbjct: 17  LFAWGANSYGQLGLGHKEDVFLPQQLSDFCQAGCIKSVTGGGGHSAVVTDGGDLFVCGLN 76

Query: 191 SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG- 249
                G   T   + R  + + L+G P +QV  G +FT  LT +G V +CGSN  GQLG 
Sbjct: 77  KDGQLGLGHTEE-VLRFTICKPLRGCPIRQVACGWDFTIMLTEKGQVLSCGSNAFGQLGV 135

Query: 250 -HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG-----SGSNFCLGH 303
            HG       P++I  L E   VV +AAG  + LA T  G V+ +G     SG   C G 
Sbjct: 136 PHGPR-KCVVPQAIECLRE--KVVCVAAGLRHALATTATGSVFQWGTGLASSGRRLCPG- 191

Query: 304 GEQHDELQPRAIQTFRRKGIH---VVRVSAGDEHVVALDSSGYV 344
             Q+  L   A +  R  G+     V   AG +H  +L  +G +
Sbjct: 192 --QNLPLFLTAKEPSRVTGLENSTAVCAVAGSDHSASLTDTGEL 233



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 61/210 (29%), Positives = 89/210 (42%), Gaps = 20/210 (9%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLG--HGPETTQCVSFTRINFPSAAHVVQVSAS 171
           Q+  G   T++++    V SCGS+  G LG  HGP   +CV    I       VV V+A 
Sbjct: 105 QVACGWDFTIMLTEKGQVLSCGSNAFGQLGVPHGPR--KCVVPQAIEC-LREKVVCVAAG 161

Query: 172 ENHAAFVLQSGQVFTCG-----DNSSFCCGHRDTNRPIF----RPRLVEALKGVPCKQVT 222
             HA     +G VF  G          C G    N P+F     P  V  L+        
Sbjct: 162 LRHALATTATGSVFQWGTGLASSGRRLCPGQ---NLPLFLTAKEPSRVTGLENSTAVCAV 218

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYM 281
           AG + +  LT  G ++  G N HGQL     +  P P+ I A   +   V  + +G +++
Sbjct: 219 AGSDHSASLTDTGELYVWGRNKHGQLAS-RAVFLPLPQRIEAHYFQDEKVTAVWSGWTHL 277

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQ 311
           +A T  G V+++G      LG   +  E Q
Sbjct: 278 VAKTETGKVFTWGRADYGQLGRRLEPPEAQ 307


>gi|440790434|gb|ELR11717.1| regulator of chromosome condensation (RCC1) repeat domain containing
            protein [Acanthamoeba castellanii str. Neff]
          Length = 1563

 Score = 77.8 bits (190), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 70/212 (33%), Positives = 95/212 (44%), Gaps = 14/212 (6%)

Query: 145  GPETTQ---CVSFTRINFP-----SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCG 196
            GPE+ Q     S  ++N P     S   VV VS   NH A + ++G V+T G N S   G
Sbjct: 849  GPESEQDDGVSSGGKLNVPFGGLVSMRQVVNVSCGWNHCAALTENGHVYTWGRNGSGELG 908

Query: 197  HRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD 255
            H D +  P   P+ V   K    K+V  G   T   T  G V+  G+   GQLG GD   
Sbjct: 909  HGDKSGVPQLHPKQVIFFKSKCVKEVVCGGEHTLARTESGSVYGWGNGRIGQLGLGDRTL 968

Query: 256  RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAI 315
               P  I  L ++  V Q+AAG ++ + V  +G V  FG G    LG G + D L P  +
Sbjct: 969  HWLPVPIKTLRKM-HVTQLAAGYAHTIVVLKSGEVMVFGGGEVGQLGTGMRKDLLVPTKL 1027

Query: 316  QTFRRKGIHVVRVSAGDEHVVALDSSGYVSLC 347
            Q        +V+ + G  H   L  +G V  C
Sbjct: 1028 QAMP----SIVQAACGYCHTALLTEAGEVYTC 1055



 Score = 70.9 bits (172), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 76/249 (30%), Positives = 106/249 (42%), Gaps = 27/249 (10%)

Query: 115  QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
            ++  G  HTL  + S SV+  G+   G LG G  T   +    I      HV Q++A   
Sbjct: 933  EVVCGGEHTLARTESGSVYGWGNGRIGQLGLGDRTLHWLPVP-IKTLRKMHVTQLAAGYA 991

Query: 174  HAAFVLQSGQV--FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
            H   VL+SG+V  F  G+      G R   + +  P  ++A+  +   Q   G   T  L
Sbjct: 992  HTIVVLKSGEVMVFGGGEVGQLGTGMR---KDLLVPTKLQAMPSI--VQAACGYCHTALL 1046

Query: 232  TIRGHVHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNG 288
            T  G V+TCGS   GQLGH D L  DR  PK +  L   G  ++ IA G  + +A+T   
Sbjct: 1047 TEAGEVYTCGSAMSGQLGHADNLQNDRLAPKMVEGLN--GKRIRFIACGSFHTIAITDLD 1104

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR---------VSAGDEHVVALD 339
             VY++G       G        Q R     +R    +V+         VS G  H VA  
Sbjct: 1105 NVYTWGG----VQGTDSDGAMRQERKAAILKRVTPSIVKGLMGKRISLVSCGHAHSVATT 1160

Query: 340  SSGYVSLCS 348
              G V + S
Sbjct: 1161 MDGEVYVWS 1169



 Score = 51.6 bits (122), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 60/228 (26%), Positives = 96/228 (42%), Gaps = 38/228 (16%)

Query: 114  MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHG---------PETTQCVSFTRINFPSAA 163
            +Q   G  HT L++ +  V++CGS++ G LGH          P+  + ++  RI F    
Sbjct: 1034 VQAACGYCHTALLTEAGEVYTCGSAMSGQLGHADNLQNDRLAPKMVEGLNGKRIRF---- 1089

Query: 164  HVVQVSASENHAAFVLQSGQVFTCGD---NSSFCCGHRDTNRPIFR---PRLVEALKGVP 217
                ++    H   +     V+T G      S     ++    I +   P +V+ L G  
Sbjct: 1090 ----IACGSFHTIAITDLDNVYTWGGVQGTDSDGAMRQERKAAILKRVTPSIVKGLMGKR 1145

Query: 218  CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ---LGHGDTLDRPTPKSIAPL--------E 266
               V+ G   +   T+ G V+   S    Q   L  G  L   +  + APL        +
Sbjct: 1146 ISLVSCGHAHSVATTMDGEVYVWSSTGSLQPPLLLRGSGLSTASGTTEAPLLVSAIPDGQ 1205

Query: 267  EVGS---VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ 311
            +  S   V   AAG  + L VT NG++YS+GSG+   LG G+Q D  +
Sbjct: 1206 DAKSKPVVKHAAAGEEFTLVVTENGLLYSWGSGAFGQLGLGDQGDRAE 1253


>gi|7305093|ref|NP_038817.1| secretion-regulating guanine nucleotide exchange factor [Mus
           musculus]
 gi|38257405|sp|Q80YD6.2|SRGEF_MOUSE RecName: Full=Secretion-regulating guanine nucleotide exchange
           factor; AltName: Full=Deafness locus-associated putative
           guanine nucleotide exchange factor; Short=DelGEF;
           AltName: Full=Guanine nucleotide exchange factor-related
           protein
 gi|6434206|emb|CAB60840.1| deafness locus associated putative guanine nucleotide exchange
           factor [Mus musculus]
 gi|110645832|gb|AAI19534.1| Secretion regulating guanine nucleotide exchange factor [Mus
           musculus]
 gi|110645834|gb|AAI19535.1| Secretion regulating guanine nucleotide exchange factor [Mus
           musculus]
 gi|127798601|gb|AAH49603.2| Secretion regulating guanine nucleotide exchange factor [Mus
           musculus]
 gi|148690982|gb|EDL22929.1| secretion regulating guanine nucleotide exchange factor [Mus
           musculus]
          Length = 464

 Score = 77.8 bits (190), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 72/224 (32%), Positives = 104/224 (46%), Gaps = 17/224 (7%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
           +F+ G++  G LG G +    +     +F  A  +  V+    H+A V   G +F CG N
Sbjct: 17  LFAWGANSYGQLGLGHKEDVFLPQQLSDFCQAGCIKSVTGGGGHSAVVTDGGDLFVCGLN 76

Query: 191 SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG- 249
                G   T   + R  + + L+G P +QV  G +FT  LT +G V +CGSN  GQLG 
Sbjct: 77  KDGQLGLGHTEE-VLRFTICKPLRGCPIRQVACGWDFTIMLTEKGQVLSCGSNAFGQLGV 135

Query: 250 -HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG-----SGSNFCLGH 303
            HG       P++I  L E   VV +AAG  + LA T  G V+ +G     SG   C G 
Sbjct: 136 PHGPR-KCVVPQAIECLRE--KVVCVAAGLRHALATTATGSVFQWGTGLASSGRRLCPG- 191

Query: 304 GEQHDELQPRAIQTFRRKGIH---VVRVSAGDEHVVALDSSGYV 344
             Q+  L   A +  R  G+     V   AG +H  +L  +G +
Sbjct: 192 --QNLPLFLTAKEPSRVTGLENSTAVCAVAGSDHSASLTDTGEL 233



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 61/210 (29%), Positives = 89/210 (42%), Gaps = 20/210 (9%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLG--HGPETTQCVSFTRINFPSAAHVVQVSAS 171
           Q+  G   T++++    V SCGS+  G LG  HGP   +CV    I       VV V+A 
Sbjct: 105 QVACGWDFTIMLTEKGQVLSCGSNAFGQLGVPHGPR--KCVVPQAIEC-LREKVVCVAAG 161

Query: 172 ENHAAFVLQSGQVFTCG-----DNSSFCCGHRDTNRPIF----RPRLVEALKGVPCKQVT 222
             HA     +G VF  G          C G    N P+F     P  V  L+        
Sbjct: 162 LRHALATTATGSVFQWGTGLASSGRRLCPGQ---NLPLFLTAKEPSRVTGLENSTAVCAV 218

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYM 281
           AG + +  LT  G ++  G N HGQL     +  P P+ I A   +   V  + +G +++
Sbjct: 219 AGSDHSASLTDTGELYVWGRNKHGQLAS-RAVFLPLPQRIEAHYFQDEKVTAVWSGWTHL 277

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQ 311
           +A T  G V+++G      LG   +  E Q
Sbjct: 278 VAKTETGKVFTWGRADYGQLGRRLEPPEAQ 307


>gi|444917133|ref|ZP_21237237.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444711259|gb|ELW52206.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 1081

 Score = 77.8 bits (190), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 72/234 (30%), Positives = 107/234 (45%), Gaps = 28/234 (11%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPE-----TTQCVSFTRINFPSAAHVVQV 168
           ++  G  H+L ++ + +V++ G++  G LG G        TQ V  T         V  V
Sbjct: 52  RLAAGLNHSLYVTPAGTVWAWGANAQGQLGEGSTLQHSTPTQVVGLT--------GVTAV 103

Query: 169 SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
           +A   H+  + + G V+T G N+    G   + R +  P  V  L GV    + AG N  
Sbjct: 104 AAGNTHSMALREEGTVWTWGTNTDGQLGDGVSQRSV--PAQVAGLTGVTA--IAAG-NLH 158

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
               I G V   G+NT GQLG G +  R TP  +A L E   VV IAAG  + LA+  +G
Sbjct: 159 SLALINGAVWAWGNNTTGQLGDGSSTSRSTPAKVAGLTE---VVAIAAGDFHSLALKRDG 215

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-HVVRVSAGDEHVVALDSS 341
            V+++G   +  LG G       P      R  G+  +V ++ G  H VA  S+
Sbjct: 216 TVWAWGGNYSGQLGDGTLDSRSTP-----VRVSGLTGIVALAGGGSHSVAASST 264



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 72/228 (31%), Positives = 103/228 (45%), Gaps = 15/228 (6%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            + I  G  H L + ++ +V++ G++  G LG G  T++ V    +       VV V+   
Sbjct: 855  VAIAAGSDHALAVRADGTVWAWGANGSGQLGDGTTTSRAVP---MQVKELVDVVAVAGGS 911

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             H+  V   G V+  G N S   G   T      P  V  L GV  + + +G   +  L 
Sbjct: 912  GHSLAVRADGTVWAWGANGSGQLGDGTTTSRTL-PVFVSTLSGV--QAIASGAQHSLALA 968

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V   G+N  GQLG G T  R  P  ++ L  V  +V   AG S+ LA+T  G V+S
Sbjct: 969  EGGVVWAWGANGSGQLGDGTTTSRTRPVQVSGLSGVQGLV---AGASFSLALT-PGKVWS 1024

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            +G+ S   LG G  +   QP A  T        V +SAG +H V L S
Sbjct: 1025 WGNNSAGQLGDGTLNSRSQPGAGPTLS----SFVALSAGAQHTVVLRS 1068



 Score = 75.5 bits (184), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 64/216 (29%), Positives = 105/216 (48%), Gaps = 18/216 (8%)

Query: 111 AGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHG--PETTQCVSFTRINFPSAAHVVQ 167
           AG  +I  G YH+L L S+ +V++ G +  G LG G  P   +  +      P  A +  
Sbjct: 500 AGATEIAAGTYHSLALRSDGTVWTWGDNSYGQLGAGATPRGPRAPAV----VPGLAVITH 555

Query: 168 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC--KQVTAGL 225
           V+A   H+  +  SGQV+  GDN     G   T       R+     G+P   + + AG 
Sbjct: 556 VAAGLFHSLALDSSGQVWAWGDNVYGQLGDGSTTSRNVPGRV----SGLPAGIQAIVAGP 611

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAV 284
           +++  L   G V T G N++GQLG G T  RP P  ++ P     ++V ++   S+ +A+
Sbjct: 612 SYSVALGADGSVWTWGENSNGQLGDGTTTARPVPARVSLPA----TLVALSTRGSHTVAL 667

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR 320
              G+++++G   +  LG+G    E  PR + +F R
Sbjct: 668 DTTGMLWAWGRNVSGQLGNGTLVSESTPRRVPSFAR 703



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/197 (31%), Positives = 95/197 (48%), Gaps = 13/197 (6%)

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           Y   L ++ SV++ G +  G LG G  T + V   R++ P  A +V +S   +H   +  
Sbjct: 613 YSVALGADGSVWTWGENSNGQLGDGTTTARPVP-ARVSLP--ATLVALSTRGSHTVALDT 669

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           +G ++  G N S   G+  T      PR V +   V  +   +GL  T  L   G V   
Sbjct: 670 TGMLWAWGRNVSGQLGN-GTLVSESTPRRVPSFARV--QGFASGLRTTFALRADGTVWAW 726

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVG--SVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           G N+ GQLG+G T   P P     ++ VG    V +A+G  ++LAV+ +G V+SFGS S 
Sbjct: 727 GDNSLGQLGNGATSASPVP-----VQAVGYPRTVPLASGAQHVLAVSSDGSVFSFGSNSR 781

Query: 299 FCLGHGEQHDELQPRAI 315
             LG+     +  PR +
Sbjct: 782 GQLGYEGSATQTSPRWL 798



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/178 (33%), Positives = 83/178 (46%), Gaps = 12/178 (6%)

Query: 167 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
           +++A  NH+ +V  +G V+  G N+    G   T +    P  V  L GV    V AG  
Sbjct: 52  RLAAGLNHSLYVTPAGTVWAWGANAQGQLGEGSTLQ-HSTPTQVVGLTGVTA--VAAGNT 108

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
            +  L   G V T G+NT GQLG G +  R  P  +A L     V  IAAG  + LA+  
Sbjct: 109 HSMALREEGTVWTWGTNTDGQLGDGVS-QRSVPAQVAGLT---GVTAIAAGNLHSLALI- 163

Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           NG V+++G+ +   LG G       P  +         VV ++AGD H +AL   G V
Sbjct: 164 NGAVWAWGNNTTGQLGDGSSTSRSTPAKVAGL----TEVVAIAAGDFHSLALKRDGTV 217



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 67/236 (28%), Positives = 104/236 (44%), Gaps = 22/236 (9%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + + +G  H L +S + SVFS GS+  G LG+    TQ    T   + +    ++  A+ 
Sbjct: 755 VPLASGAQHVLAVSSDGSVFSFGSNSRGQLGYEGSATQ----TSPRWLTGPECIEAVAAG 810

Query: 173 NHAAFVLQ-SGQVFTCGDNSSFCCGHRD-TNR--PIFRPRLVEALKGVPCKQVTAGLNFT 228
              +  L   G V+  GDN S   G    T R  P   P L   +       + AG +  
Sbjct: 811 ALFSLALSCDGGVWAWGDNGSGQLGDGAVTARTAPARVPGLAHVVA------IAAGSDHA 864

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
             +   G V   G+N  GQLG G T  R  P  +   +E+  VV +A G  + LAV  +G
Sbjct: 865 LAVRADGTVWAWGANGSGQLGDGTTTSRAVPMQV---KELVDVVAVAGGSGHSLAVRADG 921

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            V+++G+  +  LG G       P  + T    G+    +++G +H +AL   G V
Sbjct: 922 TVWAWGANGSGQLGDGTTTSRTLPVFVSTL--SGVQA--IASGAQHSLALAEGGVV 973



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/190 (30%), Positives = 88/190 (46%), Gaps = 20/190 (10%)

Query: 112 GNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS 171
           G   I  G  H+L + N +V++ G++  G LG G  T++    T         VV ++A 
Sbjct: 148 GVTAIAAGNLHSLALINGAVWAWGNNTTGQLGDGSSTSRS---TPAKVAGLTEVVAIAAG 204

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGH-----RDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
           + H+  + + G V+  G N S   G      R T   +     + AL G     V A   
Sbjct: 205 DFHSLALKRDGTVWAWGGNYSGQLGDGTLDSRSTPVRVSGLTGIVALAGGGSHSVAASST 264

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG--SVVQIAAGPSYMLAV 284
                T+ G V   G NT+GQLG+G  +      S+ PLE  G   VV +A+G S+ LA+
Sbjct: 265 -----TLGGKVWAWGDNTYGQLGNGGDV-----SSLLPLEVPGLTQVVALASGTSHSLAL 314

Query: 285 TGNGVVYSFG 294
            G+  V+++G
Sbjct: 315 RGDDSVWAWG 324



 Score = 57.8 bits (138), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 65/217 (29%), Positives = 96/217 (44%), Gaps = 19/217 (8%)

Query: 132 FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNS 191
              G++  G LG+G  + + +       PS      ++A ++H       G V+  GDN+
Sbjct: 371 LGWGANGSGQLGNGSSSVRALPG---RVPSLTAGASLAAGDHHVFLRQADGSVWAWGDNT 427

Query: 192 SFCCGHRDTNRPIFRP---RLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 248
               G       + RP   RL   L  V  + ++A    +  L   G V   G N +GQL
Sbjct: 428 ---YGQLGDGTLVSRPAPVRLSSTLTSV--RALSASSYHSLALRSDGTVWAWGDNAYGQL 482

Query: 249 GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD 308
           G      RP+P   A +  V    +IAAG  + LA+  +G V+++G  S   LG G    
Sbjct: 483 GDTSGGRRPSP---AQVPGVAGATEIAAGTYHSLALRSDGTVWTWGDNSYGQLGAGAT-- 537

Query: 309 ELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYV 344
              PRA       G+ V+  V+AG  H +ALDSSG V
Sbjct: 538 PRGPRAPAVV--PGLAVITHVAAGLFHSLALDSSGQV 572



 Score = 44.3 bits (103), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 53/179 (29%), Positives = 78/179 (43%), Gaps = 18/179 (10%)

Query: 176 AFVLQSGQVFTC---GDNSSFCCGHRDTNRPIFRPRLVEALKG-VPCKQVTAGLNFTG-- 229
           A  L  G  F+    GDN +   G   + +       V AL G VP   +TAG +     
Sbjct: 351 AQALACGNAFSLVGRGDNVTLGWGANGSGQLGNGSSSVRALPGRVPS--LTAGASLAAGD 408

Query: 230 ---FL-TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
              FL    G V   G NT+GQLG G  + RP P  ++    + SV  ++A   + LA+ 
Sbjct: 409 HHVFLRQADGSVWAWGDNTYGQLGDGTLVSRPAPVRLS--STLTSVRALSASSYHSLALR 466

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            +G V+++G  +   L  G+     +P   Q     G     ++AG  H +AL S G V
Sbjct: 467 SDGTVWAWGDNAYGQL--GDTSGGRRPSPAQVPGVAG--ATEIAAGTYHSLALRSDGTV 521


>gi|408500851|ref|YP_006864770.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
 gi|408465675|gb|AFU71204.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
          Length = 1070

 Score = 77.8 bits (190), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 73/255 (28%), Positives = 116/255 (45%), Gaps = 26/255 (10%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA-------HV 165
           +Q++ G  H+L L SN  V++ G +  G LG+   T   V   R+  P++          
Sbjct: 678 IQVSAGDEHSLALDSNGYVYAWGWNDNGRLGNNSTTDSSVP-VRVRDPASPTDPSKGLKA 736

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE------ALKGVPCK 219
           VQVSA  +H+  V   G  +  G N+    G+   N   F  R+ +      A KG+   
Sbjct: 737 VQVSAGWHHSLAVGSDGYTYAWGLNNYGQLGNSSKNSSSFPVRVRDFASPNDANKGLKAV 796

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI----APLEEVGSV--VQ 273
           QV+AG + +  +   G+ +  G N +GQLG+ +T+D   P  +    +P +    +    
Sbjct: 797 QVSAGYSHSLAVGSDGYTYAWGLNNYGQLGNSNTVDSTVPVRVRDPTSPKDASKGLKATA 856

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ-----TFRRKGIHVVRV 328
           I AG  + LAV  NG  Y++G      LG G   +   P  ++         KG+   R 
Sbjct: 857 INAGGEHSLAVGNNGYAYAWGWNLYRQLGDGTTSNSSVPVPVRDPTSPADASKGLQATRF 916

Query: 329 SAGDEHVVALDSSGY 343
           S GD H +A+ S+GY
Sbjct: 917 SVGDHHSLAVGSNGY 931



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 44/118 (37%), Positives = 66/118 (55%), Gaps = 8/118 (6%)

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS---VVQIAAGPSYMLAVTGNGVVY 291
           G  +  G NT+GQLG   T  R TP  +     V +    VQ++AG  + LA+  +G VY
Sbjct: 579 GKAYAWGDNTYGQLGDATTNSRSTPNIVRKPTGVPTDFTYVQVSAGKWHSLALGSDGYVY 638

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQ-----TFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           ++GS  +  LG+  + +   P  ++     T   KG+  ++VSAGDEH +ALDS+GYV
Sbjct: 639 AWGSNQHGQLGNNTKTNSSVPVRVRDPANPTDPNKGLKAIQVSAGDEHSLALDSNGYV 696



 Score = 68.6 bits (166), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 69/256 (26%), Positives = 113/256 (44%), Gaps = 29/256 (11%)

Query: 115 QITTGRYHTLLIS-----NSSVFSCGSSLCGVLGHGPETTQCVSFTRI-----NFPSAAH 164
           Q+   +Y+T + S     +   ++ G +  G LG    TT   S   I       P+   
Sbjct: 560 QVGGAKYYTYVFSLAVGSDGKAYAWGDNTYGQLGDA--TTNSRSTPNIVRKPTGVPTDFT 617

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRL------VEALKGVPC 218
            VQVSA + H+  +   G V+  G N     G+          R+       +  KG+  
Sbjct: 618 YVQVSAGKWHSLALGSDGYVYAWGSNQHGQLGNNTKTNSSVPVRVRDPANPTDPNKGLKA 677

Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI----APLEEVGSV--V 272
            QV+AG   +  L   G+V+  G N +G+LG+  T D   P  +    +P +    +  V
Sbjct: 678 IQVSAGDEHSLALDSNGYVYAWGWNDNGRLGNNSTTDSSVPVRVRDPASPTDPSKGLKAV 737

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF-----RRKGIHVVR 327
           Q++AG  + LAV  +G  Y++G  +   LG+  ++    P  ++ F       KG+  V+
Sbjct: 738 QVSAGWHHSLAVGSDGYTYAWGLNNYGQLGNSSKNSSSFPVRVRDFASPNDANKGLKAVQ 797

Query: 328 VSAGDEHVVALDSSGY 343
           VSAG  H +A+ S GY
Sbjct: 798 VSAGYSHSLAVGSDGY 813



 Score = 50.8 bits (120), Expect = 0.001,   Method: Composition-based stats.
 Identities = 54/221 (24%), Positives = 92/221 (41%), Gaps = 19/221 (8%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS------AAHVV 166
           +Q++ G +H+L + S+   ++ G +  G LG+  + +        +F S          V
Sbjct: 737 VQVSAGWHHSLAVGSDGYTYAWGLNNYGQLGNSSKNSSSFPVRVRDFASPNDANKGLKAV 796

Query: 167 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRL------VEALKGVPCKQ 220
           QVSA  +H+  V   G  +  G N+    G+ +T       R+       +A KG+    
Sbjct: 797 QVSAGYSHSLAVGSDGYTYAWGLNNYGQLGNSNTVDSTVPVRVRDPTSPKDASKGLKATA 856

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP------KSIAPLEEVGSVVQI 274
           + AG   +  +   G+ +  G N + QLG G T +   P       S A   +     + 
Sbjct: 857 INAGGEHSLAVGNNGYAYAWGWNLYRQLGDGTTSNSSVPVPVRDPTSPADASKGLQATRF 916

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAI 315
           + G  + LAV  NG  Y++G  S   LG G   D   P ++
Sbjct: 917 SVGDHHSLAVGSNGYAYAWGENSYGQLGDGTTDDSNVPVSV 957



 Score = 38.5 bits (88), Expect = 4.2,   Method: Composition-based stats.
 Identities = 45/195 (23%), Positives = 78/195 (40%), Gaps = 28/195 (14%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH-------V 165
           +Q++ G  H+L + S+   ++ G +  G LG+       V   R+  P++          
Sbjct: 796 VQVSAGYSHSLAVGSDGYTYAWGLNNYGQLGNSNTVDSTVP-VRVRDPTSPKDASKGLKA 854

Query: 166 VQVSASENHAAFVLQSGQVFTCG------------DNSSFCCGHRDTNRPIFRPRLVEAL 213
             ++A   H+  V  +G  +  G             NSS     RD   P       +A 
Sbjct: 855 TAINAGGEHSLAVGNNGYAYAWGWNLYRQLGDGTTSNSSVPVPVRDPTSP------ADAS 908

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVV 272
           KG+   + + G + +  +   G+ +  G N++GQLG G T D   P S+   L+ V +  
Sbjct: 909 KGLQATRFSVGDHHSLAVGSNGYAYAWGENSYGQLGDGTTDDSNVPVSVLFNLQPVITAA 968

Query: 273 QIAAGPSYMLAVTGN 287
           +    P   LA   N
Sbjct: 969 RFDTSPGTNLASVSN 983


>gi|58533120|gb|AAW78916.1| putative chromosome condensation factor [Triticum aestivum]
          Length = 907

 Score = 77.8 bits (190), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 63/221 (28%), Positives = 105/221 (47%), Gaps = 18/221 (8%)

Query: 116 ITTGRYHTLLISN-SSVFSCGSSLCGVLGHG-------PETTQCVSFTRI-----NFPSA 162
           ++ G +HT LI++   +F+ G    GVLGHG       P   + +S  +           
Sbjct: 189 VSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSISCPREVESLSGLKTIAVACGVWHT 248

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           A +V+V  +++ A   + +G++FT GD      GH D      +P  V +L      +V 
Sbjct: 249 AAIVEVIVTQSSA--TVSAGKLFTWGDGDKHRLGHGD-KEARLKPTCVASLIDYDFYRVA 305

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
            G + T  LT  G V T G++ +GQLG+ ++  RP         E   V+QIA G  ++ 
Sbjct: 306 CGHSLTVGLTTSGKVWTMGNSVYGQLGNLNSDGRPCLVEDKIASE--HVLQIACGSYHVA 363

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 323
            +T    V+++G G+N  LGHG+  D   P  ++  R + +
Sbjct: 364 VLTSRSEVFTWGKGANGRLGHGDIEDRKVPTTVEALRDRAV 404



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/177 (32%), Positives = 87/177 (49%), Gaps = 7/177 (3%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  V     HA+ V ++G+VFT G++S    GH  T      PRLVE+L       V  G
Sbjct: 79  VYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGH-GTREDSVHPRLVESLAACNIDFVACG 137

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
              T  +T  G ++T G  TH  G LGHG  +    P+ I+ PLE +  +  ++ G  + 
Sbjct: 138 EFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGPLEGL-QIAYVSCGTWHT 196

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             +T  G +++FG GS   LGHG+      PR +++    G+  + V+ G  H  A+
Sbjct: 197 ALITSMGQLFTFGDGSFGVLGHGDLKSISCPREVESL--SGLKTIAVACGVWHTAAI 251



 Score = 68.6 bits (166), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 65/246 (26%), Positives = 106/246 (43%), Gaps = 33/246 (13%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSASE 172
           R+ +L+  N  VF+ G    G LGHG       P   + ++   I+F        V+  E
Sbjct: 87  RHASLVTRNGEVFTWGEDSGGRLGHGTREDSVHPRLVESLAACNIDF--------VACGE 138

Query: 173 NHAAFVLQSGQVFTCGDNSSFC--CGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            H   V  +G+++T GD +      GH  D    I R R+   L+G+    V+ G   T 
Sbjct: 139 FHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPR-RISGPLEGLQIAYVSCGTWHTA 197

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV----- 284
            +T  G + T G  + G LGHGD      P+ +  L  + ++  +A G  +  A+     
Sbjct: 198 LITSMGQLFTFGDGSFGVLGHGDLKSISCPREVESLSGLKTIA-VACGVWHTAAIVEVIV 256

Query: 285 ------TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
                    G ++++G G    LGHG++   L+P  + +      +  RV+ G    V L
Sbjct: 257 TQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDYDFY--RVACGHSLTVGL 314

Query: 339 DSSGYV 344
            +SG V
Sbjct: 315 TTSGKV 320



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 67/245 (27%), Positives = 107/245 (43%), Gaps = 23/245 (9%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G +HT  ++ +     +  G+   G+LGHG +    +   RI+ P     +  VS  
Sbjct: 134 VACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIP-RRISGPLEGLQIAYVSCG 192

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H A +   GQ+FT GD S    GH D  + I  PR VE+L G+    V  G+  T  +
Sbjct: 193 TWHTALITSMGQLFTFGDGSFGVLGHGDL-KSISCPREVESLSGLKTIAVACGVWHTAAI 251

Query: 232 T-----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
                         G + T G     +LGHGD   R  P  +A L +     ++A G S 
Sbjct: 252 VEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDY-DFYRVACGHSL 310

Query: 281 MLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
            + +T +G V++ G   N   G  G  + + +P  ++  +    HV++++ G  HV  L 
Sbjct: 311 TVGLTTSGKVWTMG---NSVYGQLGNLNSDGRPCLVED-KIASEHVLQIACGSYHVAVLT 366

Query: 340 SSGYV 344
           S   V
Sbjct: 367 SRSEV 371



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 66/140 (47%), Gaps = 4/140 (2%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E+   +    V  G+     +T  G V T G ++ G+LGHG   D   P+ +  L 
Sbjct: 68  PKPLESNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSVHPRLVESLA 127

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIH 324
              ++  +A G  +  AVT  G +Y++G G++    LGHG       PR I +   +G+ 
Sbjct: 128 AC-NIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRI-SGPLEGLQ 185

Query: 325 VVRVSAGDEHVVALDSSGYV 344
           +  VS G  H   + S G +
Sbjct: 186 IAYVSCGTWHTALITSMGQL 205


>gi|387540886|gb|AFJ71070.1| putative E3 ubiquitin-protein ligase HERC6 isoform 1 [Macaca
           mulatta]
          Length = 1020

 Score = 77.8 bits (190), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 69/243 (28%), Positives = 111/243 (45%), Gaps = 23/243 (9%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 165
           +Q  +G  H+LL+ +N  V SCG +  G LG         PE  Q +    ++       
Sbjct: 26  LQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNVDL------ 79

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
             VS  + H+  V   G+VF  G  S    G  +     F P+ +  L G+   QV+ G 
Sbjct: 80  --VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGH 137

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             +  L+    V + G N+HGQLG G  +  + +P+ +  LE +  + Q+AAG ++  A+
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGI-PLAQVAAGGAHSFAL 196

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQ---PRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           +  G  + +GS S   L    ++  +Q   P +I   +  G  V+ +S GDEH   L   
Sbjct: 197 SLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLG--VIYISCGDEHTAVLIQD 254

Query: 342 GYV 344
           G V
Sbjct: 255 GKV 257



 Score = 71.6 bits (174), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 53/182 (29%), Positives = 97/182 (53%), Gaps = 6/182 (3%)

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           A ++Q ++ E H+  +L + +V +CGDNS    G R   R    P  ++AL+ +    V+
Sbjct: 23  AELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGEL-PEPIQALETLNVDLVS 81

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYM 281
            G   +  +  +G V   G+ + GQLG G+  +   TPK I  L  +  ++Q++ G  + 
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGI-KIIQVSCGHYHS 140

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           LA++ +  V+S+G  S+  LG G++   +  P+ +++   +GI + +V+AG  H  AL  
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSL--EGIPLAQVAAGGAHSFALSL 198

Query: 341 SG 342
            G
Sbjct: 199 CG 200



 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/228 (28%), Positives = 112/228 (49%), Gaps = 12/228 (5%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFT--RINFPSAAHVVQVSASE 172
           ++ G+ H+L + +   VF+ G+   G LG G    + +SFT  +I   +   ++QVS   
Sbjct: 80  VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIG--EFKEISFTPKKITTLNGIKIIQVSCGH 137

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  + +  QVF+ G NS    G          P+ V +L+G+P  QV AG   +  L+
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSFALS 197

Query: 233 IRGHVHTCGSNTHGQL---GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
           + G     GSN+ GQL   G    +    P SI  L+ +G V+ I+ G  +   +  +G 
Sbjct: 198 LCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLG-VIYISCGDEHTAVLIQDGK 256

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           V++FG  S+  LG+    ++  P+ ++  R  G+ V ++  G  H +A
Sbjct: 257 VFTFGDNSSGQLGYSPTPEKRGPQLVE--RIDGL-VSQIDCGSYHTLA 301



 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 61/187 (32%), Positives = 89/187 (47%), Gaps = 6/187 (3%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++ G YH+L +S +S VFS G +  G LG G E     S  R+       + QV+A  
Sbjct: 131 IQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGG 190

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPI--FRPRLVEALKGVPCKQVTAGLNFTGF 230
            H+  +   G  F  G NS+        N P+   +P  + ALK +    ++ G   T  
Sbjct: 191 AHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAV 250

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA-VTGNGV 289
           L   G V T G N+ GQLG+  T ++  P+ +  ++  G V QI  G  + LA V   G 
Sbjct: 251 LIQDGKVFTFGDNSSGQLGYSPTPEKRGPQLVERID--GLVSQIDCGSYHTLAYVHTTGQ 308

Query: 290 VYSFGSG 296
           V SFG G
Sbjct: 309 VISFGHG 315



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/153 (31%), Positives = 70/153 (45%), Gaps = 7/153 (4%)

Query: 193 FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD 252
           FC G   T+    + R  E   G    Q  +G   +  L     V +CG N+ GQLG   
Sbjct: 3   FCWG---TDSRELQRRRTERSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRR 59

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQ 311
                 P+ I  LE + +V  ++ G  + LAV   G V+++G+GS   LG GE +     
Sbjct: 60  APRGELPEPIQALETL-NVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFT 118

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           P+ I T    GI +++VS G  H +AL     V
Sbjct: 119 PKKITTL--NGIKIIQVSCGHYHSLALSKDSQV 149



 Score = 42.0 bits (97), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 43/136 (31%), Positives = 62/136 (45%), Gaps = 23/136 (16%)

Query: 137 SLCGV-LGHGPETTQCVSFTRINFPSAAH------------VVQVSASENHAAFVLQSGQ 183
           SLCG   G G  +   ++ +  N P  ++            V+ +S  + H A ++Q G+
Sbjct: 197 SLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGK 256

Query: 184 VFTCGDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
           VFT GDNSS   G+  T  P  R P+LVE + G+   Q+  G   T       +VHT G 
Sbjct: 257 VFTFGDNSSGQLGYSPT--PEKRGPQLVERIDGL-VSQIDCGSYHT-----LAYVHTTGQ 308

Query: 243 NTHGQLGHGDTLDRPT 258
                 G  DT  +PT
Sbjct: 309 VISFGHGPSDT-SKPT 323


>gi|355749434|gb|EHH53833.1| Putative E3 ubiquitin-protein ligase HERC6 [Macaca fascicularis]
          Length = 1020

 Score = 77.8 bits (190), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 69/243 (28%), Positives = 111/243 (45%), Gaps = 23/243 (9%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 165
           +Q  +G  H+LL+ +N  V SCG +  G LG         PE  Q +    ++       
Sbjct: 26  LQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNVDL------ 79

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
             VS  + H+  V   G+VF  G  S    G  +     F P+ +  L G+   QV+ G 
Sbjct: 80  --VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGH 137

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             +  L+    V + G N+HGQLG G  +  + +P+ +  LE +  + Q+AAG ++  A+
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGI-PLAQVAAGGAHSFAL 196

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQ---PRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           +  G  + +GS S   L    ++  +Q   P +I   +  G  V+ +S GDEH   L   
Sbjct: 197 SLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLG--VIYISCGDEHTAVLIQD 254

Query: 342 GYV 344
           G V
Sbjct: 255 GKV 257



 Score = 71.6 bits (174), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 53/182 (29%), Positives = 97/182 (53%), Gaps = 6/182 (3%)

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           A ++Q ++ E H+  +L + +V +CGDNS    G R   R    P  ++AL+ +    V+
Sbjct: 23  AELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGEL-PEPIQALETLNVDLVS 81

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYM 281
            G   +  +  +G V   G+ + GQLG G+  +   TPK I  L  +  ++Q++ G  + 
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGI-KIIQVSCGHYHS 140

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           LA++ +  V+S+G  S+  LG G++   +  P+ +++   +GI + +V+AG  H  AL  
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSL--EGIPLAQVAAGGAHSFALSL 198

Query: 341 SG 342
            G
Sbjct: 199 CG 200



 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/228 (28%), Positives = 112/228 (49%), Gaps = 12/228 (5%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFT--RINFPSAAHVVQVSASE 172
           ++ G+ H+L + +   VF+ G+   G LG G    + +SFT  +I   +   ++QVS   
Sbjct: 80  VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIG--EFKEISFTPKKITTLNGIKIIQVSCGH 137

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  + +  QVF+ G NS    G          P+ V +L+G+P  QV AG   +  L+
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSFALS 197

Query: 233 IRGHVHTCGSNTHGQL---GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
           + G     GSN+ GQL   G    +    P SI  L+ +G V+ I+ G  +   +  +G 
Sbjct: 198 LCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLG-VIYISCGDEHTAVLIQDGK 256

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           V++FG  S+  LG+    ++  P+ ++  R  G+ V ++  G  H +A
Sbjct: 257 VFTFGDNSSGQLGYSPTPEKRGPQLVE--RIDGL-VSQIDCGSYHTLA 301



 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 61/187 (32%), Positives = 89/187 (47%), Gaps = 6/187 (3%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++ G YH+L +S +S VFS G +  G LG G E     S  R+       + QV+A  
Sbjct: 131 IQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGG 190

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPI--FRPRLVEALKGVPCKQVTAGLNFTGF 230
            H+  +   G  F  G NS+        N P+   +P  + ALK +    ++ G   T  
Sbjct: 191 AHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAV 250

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA-VTGNGV 289
           L   G V T G N+ GQLG+  T ++  P+ +  ++  G V QI  G  + LA V   G 
Sbjct: 251 LIQDGKVFTFGDNSSGQLGYSPTPEKRGPQLVERID--GLVSQIDCGSYHTLAYVHTTGQ 308

Query: 290 VYSFGSG 296
           V SFG G
Sbjct: 309 VISFGHG 315



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/153 (31%), Positives = 70/153 (45%), Gaps = 7/153 (4%)

Query: 193 FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD 252
           FC G   T+    + R  E   G    Q  +G   +  L     V +CG N+ GQLG   
Sbjct: 3   FCWG---TDSRELQRRRTERSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRR 59

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQ 311
                 P+ I  LE + +V  ++ G  + LAV   G V+++G+GS   LG GE +     
Sbjct: 60  APRGELPEPIQALETL-NVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFT 118

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           P+ I T    GI +++VS G  H +AL     V
Sbjct: 119 PKKITTL--NGIKIIQVSCGHYHSLALSKDSQV 149



 Score = 42.0 bits (97), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 43/136 (31%), Positives = 62/136 (45%), Gaps = 23/136 (16%)

Query: 137 SLCGV-LGHGPETTQCVSFTRINFPSAAH------------VVQVSASENHAAFVLQSGQ 183
           SLCG   G G  +   ++ +  N P  ++            V+ +S  + H A ++Q G+
Sbjct: 197 SLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGK 256

Query: 184 VFTCGDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
           VFT GDNSS   G+  T  P  R P+LVE + G+   Q+  G   T       +VHT G 
Sbjct: 257 VFTFGDNSSGQLGYSPT--PEKRGPQLVERIDGL-VSQIDCGSYHT-----LAYVHTTGQ 308

Query: 243 NTHGQLGHGDTLDRPT 258
                 G  DT  +PT
Sbjct: 309 VISFGHGPSDT-SKPT 323


>gi|308802742|ref|XP_003078684.1| FOG: RCC1 domain (ISS) [Ostreococcus tauri]
 gi|116057137|emb|CAL51564.1| FOG: RCC1 domain (ISS) [Ostreococcus tauri]
          Length = 419

 Score = 77.8 bits (190), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 72/231 (31%), Positives = 104/231 (45%), Gaps = 22/231 (9%)

Query: 130 SVFSCGSSLCGVLGHGPE-TTQCVSFTRINF--P----SAAHVVQVSASENHAAFVLQSG 182
           +  S G+   G LGHG   T   VSF   N+  P        V Q +A   H+ F+   G
Sbjct: 26  TALSAGNGDFGRLGHGQVLTDDDVSFRSSNYFHPVRGLEDVDVTQCAAGGAHSIFLAHGG 85

Query: 183 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            VF CG N+    GH   +  +    LV+    V   +V AG N T  + + G V   G 
Sbjct: 86  FVFACGLNNYGQLGHGKHSAHVPEAALVDL--DVEVVRVAAGNNHTLCVDVDGGVWAFGK 143

Query: 243 NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
           N  GQLG G  LD   P+ I  L   G +V +A+G  + LA++ +  VYS+G+ ++  LG
Sbjct: 144 NEGGQLGTGLDLDGFQPRRIETLALEGKIVDVASGAEHSLALSEDARVYSWGTSADGVLG 203

Query: 303 HG-EQHDE----------LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           HG E  +E           +PR ++        V  ++AG  H   +D  G
Sbjct: 204 HGSETWNEGWFYRTAKTVAKPRLLRALSE--TKVRSIAAGHMHSACVDERG 252



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 69/248 (27%), Positives = 111/248 (44%), Gaps = 25/248 (10%)

Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q   G  H++ +++   VF+CG +  G LGHG  +        ++      VV+V+A  N
Sbjct: 70  QCAAGGAHSIFLAHGGFVFACGLNNYGQLGHGKHSAHVPEAALVDLD--VEVVRVAAGNN 127

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE--ALKGVPCKQVTAGLNFTGFL 231
           H   V   G V+  G N     G    +   F+PR +E  AL+G     V +G   +  L
Sbjct: 128 HTLCVDVDGGVWAFGKNEGGQLG-TGLDLDGFQPRRIETLALEG-KIVDVASGAEHSLAL 185

Query: 232 TIRGHVHTCGSNTHGQLGHG-DTLDR----------PTPKSIAPLEEVGSVVQIAAGPSY 280
           +    V++ G++  G LGHG +T +             P+ +  L E   V  IAAG  +
Sbjct: 186 SEDARVYSWGTSADGVLGHGSETWNEGWFYRTAKTVAKPRLLRALSET-KVRSIAAGHMH 244

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
              V   G ++++G G    LG   ++   E  P+++ T R     V +V+ G  H +A 
Sbjct: 245 SACVDERGELFTWGQGRFNQLGQTSKYVDHETAPKSVDTLR----FVHQVTCGGLHTLAS 300

Query: 339 DSSGYVSL 346
            S+G VS 
Sbjct: 301 TSAGVVSW 308



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 62/244 (25%), Positives = 105/244 (43%), Gaps = 22/244 (9%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G  HTL +  +  V++ G +  G LG G +                 +V V++  
Sbjct: 120 VRVAAGNNHTLCVDVDGGVWAFGKNEGGQLGTGLDLDGFQPRRIETLALEGKIVDVASGA 179

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRD----------TNRPIFRPRLVEALKGVPCKQVT 222
            H+  + +  +V++ G ++    GH            T + + +PRL+ AL     + + 
Sbjct: 180 EHSLALSEDARVYSWGTSADGVLGHGSETWNEGWFYRTAKTVAKPRLLRALSETKVRSIA 239

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGH-GDTLDRPT-PKSIAPLEEVGSVVQIAAGPSY 280
           AG   +  +  RG + T G     QLG     +D  T PKS+  L     V Q+  G  +
Sbjct: 240 AGHMHSACVDERGELFTWGQGRFNQLGQTSKYVDHETAPKSVDTLR---FVHQVTCGGLH 296

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ--PRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            LA T  GVV S+G+  +  LGHG   D     P+ I+   R      ++SAG +H   +
Sbjct: 297 TLASTSAGVV-SWGANQHGELGHGSNSDAKSAIPKPIKLSSRG---WSKLSAGWKHSAGV 352

Query: 339 DSSG 342
            + G
Sbjct: 353 SNDG 356



 Score = 38.9 bits (89), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 65/141 (46%), Gaps = 4/141 (2%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSS--DIV 107
           P+  R+L +     + A H   A +    + EL     G + ++ +  + V+H +    V
Sbjct: 224 PRLLRALSETKVRSIAAGHMHSACVDE--RGELFTWGQGRFNQLGQTSKYVDHETAPKSV 281

Query: 108 ETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ 167
           +T     Q+T G  HTL  +++ V S G++  G LGHG  +    +  +    S+    +
Sbjct: 282 DTLRFVHQVTCGGLHTLASTSAGVVSWGANQHGELGHGSNSDAKSAIPKPIKLSSRGWSK 341

Query: 168 VSASENHAAFVLQSGQVFTCG 188
           +SA   H+A V   G++F  G
Sbjct: 342 LSAGWKHSAGVSNDGKLFAWG 362


>gi|15088545|gb|AAK84081.1|AF326781_2 putative chromosome condensation factor [Triticum monococcum]
          Length = 907

 Score = 77.4 bits (189), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 63/221 (28%), Positives = 105/221 (47%), Gaps = 18/221 (8%)

Query: 116 ITTGRYHTLLISN-SSVFSCGSSLCGVLGHG-------PETTQCVSFTRI-----NFPSA 162
           ++ G +HT LI++   +F+ G    GVLGHG       P   + +S  +           
Sbjct: 189 VSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSISCPREVESLSGLKTIAVACGVWHT 248

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           A +V+V  +++ A   + +G++FT GD      GH D      +P  V +L      +V 
Sbjct: 249 AAIVEVIVTQSSA--TVSAGKLFTWGDGDKHRLGHGD-KEARLKPTCVASLIDYDFYRVA 305

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
            G + T  LT  G V T G++ +GQLG+ ++  RP         E   V+QIA G  ++ 
Sbjct: 306 CGHSLTVGLTTSGKVWTMGNSVYGQLGNLNSDGRPCLVEDKIASE--HVLQIACGSYHVA 363

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 323
            +T    V+++G G+N  LGHG+  D   P  ++  R + +
Sbjct: 364 VLTSRSEVFTWGKGANGRLGHGDIEDRKVPTTVEALRDRAV 404



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/177 (32%), Positives = 87/177 (49%), Gaps = 7/177 (3%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  V     HA+ V ++G+VFT G++S    GH  T      PRLVE+L       V  G
Sbjct: 79  VYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGH-GTREDSVHPRLVESLAACNIDFVACG 137

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
              T  +T  G ++T G  TH  G LGHG  +    P+ I+ PLE +  +  ++ G  + 
Sbjct: 138 EFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGPLEGL-QIAYVSCGTWHT 196

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             +T  G +++FG GS   LGHG+      PR +++    G+  + V+ G  H  A+
Sbjct: 197 ALITSMGQLFTFGDGSFGVLGHGDLKSISCPREVESL--SGLKTIAVACGVWHTAAI 251



 Score = 68.6 bits (166), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 65/246 (26%), Positives = 106/246 (43%), Gaps = 33/246 (13%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSASE 172
           R+ +L+  N  VF+ G    G LGHG       P   + ++   I+F        V+  E
Sbjct: 87  RHASLVTRNGEVFTWGEDSGGRLGHGTREDSVHPRLVESLAACNIDF--------VACGE 138

Query: 173 NHAAFVLQSGQVFTCGDNSSFC--CGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            H   V  +G+++T GD +      GH  D    I R R+   L+G+    V+ G   T 
Sbjct: 139 FHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPR-RISGPLEGLQIAYVSCGTWHTA 197

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV----- 284
            +T  G + T G  + G LGHGD      P+ +  L  + ++  +A G  +  A+     
Sbjct: 198 LITSMGQLFTFGDGSFGVLGHGDLKSISCPREVESLSGLKTIA-VACGVWHTAAIVEVIV 256

Query: 285 ------TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
                    G ++++G G    LGHG++   L+P  + +      +  RV+ G    V L
Sbjct: 257 TQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDYDFY--RVACGHSLTVGL 314

Query: 339 DSSGYV 344
            +SG V
Sbjct: 315 TTSGKV 320



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 67/245 (27%), Positives = 107/245 (43%), Gaps = 23/245 (9%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G +HT  ++ +     +  G+   G+LGHG +    +   RI+ P     +  VS  
Sbjct: 134 VACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIP-RRISGPLEGLQIAYVSCG 192

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H A +   GQ+FT GD S    GH D  + I  PR VE+L G+    V  G+  T  +
Sbjct: 193 TWHTALITSMGQLFTFGDGSFGVLGHGDL-KSISCPREVESLSGLKTIAVACGVWHTAAI 251

Query: 232 T-----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
                         G + T G     +LGHGD   R  P  +A L +     ++A G S 
Sbjct: 252 VEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDY-DFYRVACGHSL 310

Query: 281 MLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
            + +T +G V++ G   N   G  G  + + +P  ++  +    HV++++ G  HV  L 
Sbjct: 311 TVGLTTSGKVWTMG---NSVYGQLGNLNSDGRPCLVED-KIASEHVLQIACGSYHVAVLT 366

Query: 340 SSGYV 344
           S   V
Sbjct: 367 SRSEV 371



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 66/140 (47%), Gaps = 4/140 (2%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E+   +    V  G+     +T  G V T G ++ G+LGHG   D   P+ +  L 
Sbjct: 68  PKPLESNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSVHPRLVESLA 127

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIH 324
              ++  +A G  +  AVT  G +Y++G G++    LGHG       PR I +   +G+ 
Sbjct: 128 AC-NIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRI-SGPLEGLQ 185

Query: 325 VVRVSAGDEHVVALDSSGYV 344
           +  VS G  H   + S G +
Sbjct: 186 IAYVSCGTWHTALITSMGQL 205


>gi|359477742|ref|XP_002281342.2| PREDICTED: uncharacterized protein LOC100254552 [Vitis vinifera]
          Length = 1082

 Score = 77.4 bits (189), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 59/177 (33%), Positives = 86/177 (48%), Gaps = 7/177 (3%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++    H A V + G+VFT G+ S    GH   N    RP LVE L       V  G
Sbjct: 269 VHQIACGVRHVALVTRQGEVFTWGEESGGRLGHGIDND-FSRPHLVEFLAVNNVDFVACG 327

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
              T  ++  G + T G  TH  G LGHG  +    PK ++ PLE +  V+ +A G  + 
Sbjct: 328 EYHTCAVSTSGDLFTWGDGTHNAGLLGHGTEVSHWIPKRVSGPLEGL-QVLSVACGTWHS 386

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
              T NG +++FG G+   LGHG++     PR +Q     G+  ++V+ G  H  A+
Sbjct: 387 ALATSNGKLFTFGDGTFGVLGHGDRESVPYPREVQIL--SGLKTIKVACGVWHTAAI 441



 Score = 72.4 bits (176), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 18/226 (7%)

Query: 114 MQITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G +H+ L  SN  +F+ G    GVLGHG    + V + R +   S    ++V+  
Sbjct: 377 LSVACGTWHSALATSNGKLFTFGDGTFGVLGHG--DRESVPYPREVQILSGLKTIKVACG 434

Query: 172 ENHAAFVL----QSG------QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
             H A ++    QSG      ++FT GD      GH  +      P  V AL      Q+
Sbjct: 435 VWHTAAIIEVMSQSGTNISSRKLFTWGDGDKHRLGH-GSKETYLLPTCVSALIDYNFHQL 493

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSY 280
             G   T  LT  GHV T G   +GQLG  + L       +   + VG  V+ I+ G  +
Sbjct: 494 ACGHTMTVALTTSGHVFTMGGTAYGQLG--NPLSDGRLPCLVQDKLVGEFVEEISCGAYH 551

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
           +  +T    V+++G G+N  LGHG+  D   P  ++  + + +  +
Sbjct: 552 VAVLTSRSEVFTWGRGANGRLGHGDTEDRRSPTFVEALKDRNVKSI 597



 Score = 68.9 bits (167), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 68/246 (27%), Positives = 106/246 (43%), Gaps = 23/246 (9%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSA 170
           QI  G  H  L++    VF+ G    G LGHG +      F+R   + F +  +V  V+ 
Sbjct: 271 QIACGVRHVALVTRQGEVFTWGEESGGRLGHGIDN----DFSRPHLVEFLAVNNVDFVAC 326

Query: 171 SENHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
            E H   V  SG +FT GD +  +   GH          R+   L+G+    V  G   +
Sbjct: 327 GEYHTCAVSTSGDLFTWGDGTHNAGLLGHGTEVSHWIPKRVSGPLEGLQVLSVACGTWHS 386

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV---- 284
              T  G + T G  T G LGHGD    P P+ +  L  +   +++A G  +  A+    
Sbjct: 387 ALATSNGKLFTFGDGTFGVLGHGDRESVPYPREVQILSGL-KTIKVACGVWHTAAIIEVM 445

Query: 285 --TGNGV----VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             +G  +    ++++G G    LGHG +   L P  +        H  +++ G    VAL
Sbjct: 446 SQSGTNISSRKLFTWGDGDKHRLGHGSKETYLLPTCVSALIDYNFH--QLACGHTMTVAL 503

Query: 339 DSSGYV 344
            +SG+V
Sbjct: 504 TTSGHV 509



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 38/143 (26%), Positives = 71/143 (49%), Gaps = 4/143 (2%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  P+ +E+   +   Q+  G+     +T +G V T G  + G+LGHG   D   P  + 
Sbjct: 255 VLTPKSLESNVVLDVHQIACGVRHVALVTRQGEVFTWGEESGGRLGHGIDNDFSRPHLVE 314

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRK 321
            L  V +V  +A G  +  AV+ +G ++++G G++    LGHG +     P+ + +   +
Sbjct: 315 FL-AVNNVDFVACGEYHTCAVSTSGDLFTWGDGTHNAGLLGHGTEVSHWIPKRV-SGPLE 372

Query: 322 GIHVVRVSAGDEHVVALDSSGYV 344
           G+ V+ V+ G  H     S+G +
Sbjct: 373 GLQVLSVACGTWHSALATSNGKL 395


>gi|218195863|gb|EEC78290.1| hypothetical protein OsI_18002 [Oryza sativa Indica Group]
          Length = 1012

 Score = 77.4 bits (189), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 65/227 (28%), Positives = 110/227 (48%), Gaps = 15/227 (6%)

Query: 116 ITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           ++ G +HT L  S+  +++ G    GVLGHG   T  +S+ + +        + VS    
Sbjct: 328 LSCGTWHTALRTSSGKLYTFGDGTFGVLGHGNRET--ISYPKEVESLKGLRTISVSCGVW 385

Query: 174 HAAFVLQ---------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           H A V++         SG++FT GD   +  GH D +  + +P  V +L      +   G
Sbjct: 386 HTAAVVEVIMAQSNTSSGKLFTWGDGDKYRLGHGDRSSKL-KPTCVPSLIDYNFHKAVCG 444

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
              T  LT  GH+ T GS+ +GQLG+ +   R  P+ +      G VV++  G  ++  +
Sbjct: 445 HTLTIGLTTSGHIFTAGSSVYGQLGNPNNDGR-YPRLVEEKLGGGGVVEVVCGAYHVAVL 503

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
           T +G VY++G G+N  LGHG+  D   P  ++  R + +  +   +G
Sbjct: 504 TQSGEVYTWGKGANGRLGHGDIADRKTPTFVEALRDRSVKRIACGSG 550



 Score = 54.7 bits (130), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 96/217 (44%), Gaps = 25/217 (11%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRIN-FPSAAHVVQ-VSA 170
           ++  L+   + VF+ G    G LGHG       P   + +S   +   P    VV+ +S 
Sbjct: 271 KHAALVTRQAEVFTWGEECSGRLGHGAGTSIFQPRLVESLSICNVETLPVGLQVVKLLSC 330

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGH--RDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
              H A    SG+++T GD +    GH  R+T   I  P+ VE+LKG+    V+ G+  T
Sbjct: 331 GTWHTALRTSSGKLYTFGDGTFGVLGHGNRET---ISYPKEVESLKGLRTISVSCGVWHT 387

Query: 229 GFL---------TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
             +         T  G + T G     +LGHGD   +  P  +  L +  +  +   G +
Sbjct: 388 AAVVEVIMAQSNTSSGKLFTWGDGDKYRLGHGDRSSKLKPTCVPSLIDY-NFHKAVCGHT 446

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
             + +T +G +++ GS     LG+   +D   PR ++
Sbjct: 447 LTIGLTTSGHIFTAGSSVYGQLGN-PNNDGRYPRLVE 482



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 67/144 (46%), Gaps = 11/144 (7%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           I  P+ +E+   +    V  G+     +T +  V T G    G+LGHG       P+ + 
Sbjct: 249 ILVPKPLESNVMLDVSYVACGVKHAALVTRQAEVFTWGEECSGRLGHGAGTSIFQPRLVE 308

Query: 264 PLE-------EVG-SVVQIAAGPSYMLAV-TGNGVVYSFGSGSNFCLGHGEQHDELQPRA 314
            L         VG  VV++ +  ++  A+ T +G +Y+FG G+   LGHG +     P+ 
Sbjct: 309 SLSICNVETLPVGLQVVKLLSCGTWHTALRTSSGKLYTFGDGTFGVLGHGNRETISYPKE 368

Query: 315 IQTFRRKGIHVVRVSAGDEHVVAL 338
           +++   KG+  + VS G  H  A+
Sbjct: 369 VESL--KGLRTISVSCGVWHTAAV 390


>gi|218191372|gb|EEC73799.1| hypothetical protein OsI_08500 [Oryza sativa Indica Group]
          Length = 988

 Score = 77.4 bits (189), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 101/212 (47%), Gaps = 8/212 (3%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 189
           +F  G     VL HG  +   VS  R+ N      V  V+  E HAA V + G+VF+ G 
Sbjct: 182 IFVWGEVPGNVLDHGDVSKANVSLPRLLNTTHIIDVQSVACGEKHAAIVTKQGEVFSWGV 241

Query: 190 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
           ++    GH+  +  +  P+++E+L     K +  G   T  ++I G ++  G  TH    
Sbjct: 242 DNGGRLGHK-VSVSVSDPKIIESLASTRVKAIAFGAKHTCAVSISGELYEWGEGTHCLGL 300

Query: 250 HGDTLDRPTP---KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
            GD   R      K   PL+ + S+++IA G  +   ++  G ++++G G+   LGHG+ 
Sbjct: 301 WGDQYQRSQWFPHKLFGPLDGI-SILKIACGHWHTAIISSAGQIFTYGDGTFGVLGHGDT 359

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
               +P+ +++   KG+    ++ G  H  A+
Sbjct: 360 LTVARPKQVESL--KGVRAKAIACGPWHTAAI 389



 Score = 70.9 bits (172), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 64/238 (26%), Positives = 102/238 (42%), Gaps = 33/238 (13%)

Query: 133 SCGSSLCGVLGHGPETTQCV-----SFTRIN-FP-------SAAHVVQVSASENHAAFVL 179
           +C  S+ G L    E T C+      + R   FP           +++++    H A + 
Sbjct: 279 TCAVSISGELYEWGEGTHCLGLWGDQYQRSQWFPHKLFGPLDGISILKIACGHWHTAIIS 338

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR----- 234
            +GQ+FT GD +    GH DT   + RP+ VE+LKGV  K +  G   T  +  R     
Sbjct: 339 SAGQIFTYGDGTFGVLGHGDT-LTVARPKQVESLKGVRAKAIACGPWHTAAIVERMGTVK 397

Query: 235 -----GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
                G + T G    G+LGH D   +  P  + PL +     Q++   +  + +T  GV
Sbjct: 398 SNAPSGKLFTWGDADRGKLGHADKKMKLVPTCVEPLNDF-DFAQVSCAKAQTIVLTITGV 456

Query: 290 VYSFGSGSNFCLGHGEQHDE---LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           V++ GS  +  LG+    D    L    ++T       V  +S+G  H+  L  +G V
Sbjct: 457 VFTIGSKEHGRLGNPLSEDTSICLIEGPLKTE-----FVREISSGSSHIAVLTMNGKV 509



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 59/250 (23%), Positives = 101/250 (40%), Gaps = 33/250 (13%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGH-------GPETTQCVSFTRINFPSAAHVVQ 167
           +  G  H  +++    VFS G    G LGH        P+  + ++ TR+          
Sbjct: 220 VACGEKHAAIVTKQGEVFSWGVDNGGRLGHKVSVSVSDPKIIESLASTRVK--------A 271

Query: 168 VSASENHAAFVLQSGQVFTCGDNSSFC---CGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           ++    H   V  SG+++  G+ +  C    G +      F  +L   L G+   ++  G
Sbjct: 272 IAFGAKHTCAVSISGELYEWGEGT-HCLGLWGDQYQRSQWFPHKLFGPLDGISILKIACG 330

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
              T  ++  G + T G  T G LGHGDTL    PK +  L+ V +   IA GP +  A+
Sbjct: 331 HWHTAIISSAGQIFTYGDGTFGVLGHGDTLTVARPKQVESLKGVRAKA-IACGPWHTAAI 389

Query: 285 TG----------NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 334
                       +G ++++G      LGH ++  +L P  ++          +VS     
Sbjct: 390 VERMGTVKSNAPSGKLFTWGDADRGKLGHADKKMKLVPTCVEPL--NDFDFAQVSCAKAQ 447

Query: 335 VVALDSSGYV 344
            + L  +G V
Sbjct: 448 TIVLTITGVV 457



 Score = 54.3 bits (129), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 56/234 (23%), Positives = 89/234 (38%), Gaps = 66/234 (28%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           ++I  G +HT +IS++  +F+ G    GVLGHG +T       ++          ++   
Sbjct: 325 LKIACGHWHTAIISSAGQIFTYGDGTFGVLGHG-DTLTVARPKQVESLKGVRAKAIACGP 383

Query: 173 NHAAFVLQ----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG-----VP 217
            H A +++          SG++FT GD      GH D    +  P  VE L       V 
Sbjct: 384 WHTAAIVERMGTVKSNAPSGKLFTWGDADRGKLGHADKKMKLV-PTCVEPLNDFDFAQVS 442

Query: 218 C-----------------------------------------------KQVTAGLNFTGF 230
           C                                               +++++G +    
Sbjct: 443 CAKAQTIVLTITGVVFTIGSKEHGRLGNPLSEDTSICLIEGPLKTEFVREISSGSSHIAV 502

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
           LT+ G V T G  T GQLG GD +DR  P  +  LE+   V  IA G ++ +A+
Sbjct: 503 LTMNGKVFTWGKGTEGQLGLGDYVDRSYPTLVEALED-KQVHSIACGFNFTMAI 555



 Score = 54.3 bits (129), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 49/182 (26%), Positives = 84/182 (46%), Gaps = 6/182 (3%)

Query: 167 QVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRP-IFRPRLVEALKGVPCKQVTAG 224
           Q S+   H A+   S   +F  G+       H D ++  +  PRL+     +  + V  G
Sbjct: 164 QKSSEGLHVAYGATSLKDIFVWGEVPGNVLDHGDVSKANVSLPRLLNTTHIIDVQSVACG 223

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
                 +T +G V + G +  G+LGH  ++    PK I  L     V  IA G  +  AV
Sbjct: 224 EKHAAIVTKQGEVFSWGVDNGGRLGHKVSVSVSDPKIIESLAST-RVKAIAFGAKHTCAV 282

Query: 285 TGNGVVYSFGSGSNFCLG-HGEQHDELQPRAIQTF-RRKGIHVVRVSAGDEHVVALDSSG 342
           + +G +Y +G G++ CLG  G+Q+   Q    + F    GI +++++ G  H   + S+G
Sbjct: 283 SISGELYEWGEGTH-CLGLWGDQYQRSQWFPHKLFGPLDGISILKIACGHWHTAIISSAG 341

Query: 343 YV 344
            +
Sbjct: 342 QI 343


>gi|149701724|ref|XP_001494887.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Equus
           caballus]
          Length = 988

 Score = 77.4 bits (189), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 114/228 (50%), Gaps = 12/228 (5%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFT--RINFPSAAHVVQVSASE 172
           ++ G+ H+L + +   VF+ G+   G LG G    + ++FT  +I   +   ++QVS  +
Sbjct: 51  VSCGQEHSLAVCHRGRVFAWGAGSEGQLGTG--EVKGINFTPKKIKTLTGIKIIQVSCGD 108

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  + + GQVF+ G NS    G          P+ V +L+G+P  QV AG   +  L+
Sbjct: 109 YHSLALSEGGQVFSWGKNSQGQLGLGKEFPSQDSPQRVRSLEGIPLAQVAAGGAHSFALS 168

Query: 233 IRGHVHTCGSNTHGQL---GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
           + G     G+N+ GQL   G+   +    P+SI  L  +G V+ I+ G  +   +T NG 
Sbjct: 169 VSGTSFGWGNNSAGQLALSGNNVPVQSYKPRSIGALRNLG-VIYISCGYEHTAVLTQNGK 227

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           V++FG  S   LGH     +  P+ ++  R  G+ V ++  G  H +A
Sbjct: 228 VFTFGDNSCGQLGHSPSAQDRGPQLVE--RIDGL-VSQIDCGSYHTLA 272



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 62/187 (33%), Positives = 90/187 (48%), Gaps = 6/187 (3%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++ G YH+L +S    VFS G +  G LG G E     S  R+       + QV+A  
Sbjct: 102 IQVSCGDYHSLALSEGGQVFSWGKNSQGQLGLGKEFPSQDSPQRVRSLEGIPLAQVAAGG 161

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPI--FRPRLVEALKGVPCKQVTAGLNFTGF 230
            H+  +  SG  F  G+NS+        N P+  ++PR + AL+ +    ++ G   T  
Sbjct: 162 AHSFALSVSGTSFGWGNNSAGQLALSGNNVPVQSYKPRSIGALRNLGVIYISCGYEHTAV 221

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA-VTGNGV 289
           LT  G V T G N+ GQLGH  +     P+ +  ++  G V QI  G  + LA V   G 
Sbjct: 222 LTQNGKVFTFGDNSCGQLGHSPSAQDRGPQLVERID--GLVSQIDCGSYHTLAYVYTTGQ 279

Query: 290 VYSFGSG 296
           V SFG G
Sbjct: 280 VVSFGRG 286



 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 87/181 (48%), Gaps = 7/181 (3%)

Query: 168 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
           VS  + H+  V   G+VF  G  S    G  +     F P+ ++ L G+   QV+ G   
Sbjct: 51  VSCGQEHSLAVCHRGRVFAWGAGSEGQLGTGEVKGINFTPKKIKTLTGIKIIQVSCGDYH 110

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
           +  L+  G V + G N+ GQLG G     + +P+ +  LE +  + Q+AAG ++  A++ 
Sbjct: 111 SLALSEGGQVFSWGKNSQGQLGLGKEFPSQDSPQRVRSLEGI-PLAQVAAGGAHSFALSV 169

Query: 287 NGVVYSFGSGSNFCL---GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           +G  + +G+ S   L   G+       +PR+I   R  G  V+ +S G EH   L  +G 
Sbjct: 170 SGTSFGWGNNSAGQLALSGNNVPVQSYKPRSIGALRNLG--VIYISCGYEHTAVLTQNGK 227

Query: 344 V 344
           V
Sbjct: 228 V 228



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 71/138 (51%), Gaps = 5/138 (3%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPL 265
           P  +  L+ +    V+ G   +  +  RG V   G+ + GQLG G+      TPK I  L
Sbjct: 37  PEPIRTLETLRVSLVSCGQEHSLAVCHRGRVFAWGAGSEGQLGTGEVKGINFTPKKIKTL 96

Query: 266 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIH 324
             +  ++Q++ G  + LA++  G V+S+G  S   LG G++   +  P+ +++   +GI 
Sbjct: 97  TGI-KIIQVSCGDYHSLALSEGGQVFSWGKNSQGQLGLGKEFPSQDSPQRVRSL--EGIP 153

Query: 325 VVRVSAGDEHVVALDSSG 342
           + +V+AG  H  AL  SG
Sbjct: 154 LAQVAAGGAHSFALSVSG 171


>gi|302810693|ref|XP_002987037.1| hypothetical protein SELMODRAFT_125311 [Selaginella moellendorffii]
 gi|300145202|gb|EFJ11880.1| hypothetical protein SELMODRAFT_125311 [Selaginella moellendorffii]
          Length = 228

 Score = 77.4 bits (189), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 53/179 (29%), Positives = 88/179 (49%), Gaps = 4/179 (2%)

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
           V+V+   +H   +  SG V++ G  +    GH  T      P +V++L G+   Q+  G 
Sbjct: 38  VRVACGSSHTLALTGSGDVYSFGQGTFGALGH-GTTESCSSPVIVDSLWGLGIVQIACGD 96

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
           N +  LT+ G + + G   +GQLG G   +   P  +  L +   + Q+  G  Y +A+ 
Sbjct: 97  NHSCALTVEGQLFSWGRGKYGQLGCGSVENHLQPVPVTALSDR-LLTQVVCGADYTMAID 155

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            +G ++S+G G     GHG Q + L P+ + +      ++V+ SAG  H VAL S G V
Sbjct: 156 SDGQLFSWGHGHWGQTGHGTQDNILVPKLVCSLEND--NIVQASAGARHAVALTSGGGV 212



 Score = 70.9 bits (172), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 55/184 (29%), Positives = 89/184 (48%), Gaps = 8/184 (4%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G  HTL ++ S  V+S G    G LGHG  T  C S   ++      +VQ++  +
Sbjct: 38  VRVACGSSHTLALTGSGDVYSFGQGTFGALGHG-TTESCSSPVIVDSLWGLGIVQIACGD 96

Query: 173 NHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
           NH+  +   GQ+F+ G        CG  + +    +P  V AL      QV  G ++T  
Sbjct: 97  NHSCALTVEGQLFSWGRGKYGQLGCGSVENH---LQPVPVTALSDRLLTQVVCGADYTMA 153

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           +   G + + G    GQ GHG   +   PK +  LE   ++VQ +AG  + +A+T  G V
Sbjct: 154 IDSDGQLFSWGHGHWGQTGHGTQDNILVPKLVCSLEN-DNIVQASAGARHAVALTSGGGV 212

Query: 291 YSFG 294
           Y++G
Sbjct: 213 YAWG 216



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 54/107 (50%), Gaps = 6/107 (5%)

Query: 239 TCGSNTHGQLGHGDT---LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
           + G    GQLG  D       P P+ +    E+   V++A G S+ LA+TG+G VYSFG 
Sbjct: 3   SWGCGEFGQLGLKDAAGVFTSPLPRFLRGSREL-LFVRVACGSSHTLALTGSGDVYSFGQ 61

Query: 296 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           G+   LGHG       P  + +    G+ +V+++ GD H  AL   G
Sbjct: 62  GTFGALGHGTTESCSSPVIVDSLW--GLGIVQIACGDNHSCALTVEG 106


>gi|7939537|dbj|BAA95740.1| chromosome condensation regulator-like protein protein [Arabidopsis
           thaliana]
          Length = 1067

 Score = 77.4 bits (189), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 68/231 (29%), Positives = 109/231 (47%), Gaps = 20/231 (8%)

Query: 114 MQITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G +H+ L  +N  +F+ G    GVLGHG    + VS+ + +   +    V+V+ S
Sbjct: 370 LSVACGTWHSALATANGKLFTFGDGAFGVLGHG--NRESVSYPKEVQSLNGLKTVKVACS 427

Query: 172 ENHAAFVLQ----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
             H A +++          S ++FT GD      GH +    +  P  V +L      ++
Sbjct: 428 IWHTAAIVEVMGQTATSMSSRKLFTWGDGDKNRLGHGNKETYLL-PTCVSSLIDYNFHKI 486

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSY 280
             G  FT  LT  GHV T G   HGQLG+  + D   P  +     VG  V+ IA G  +
Sbjct: 487 ACGHTFTVALTTSGHVFTMGGTAHGQLGNSIS-DGKLP-CLVQDRLVGEFVEEIACGAHH 544

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
           +  +T    V+++G G+N  LGHG+  D+  P  ++  R +  HV  +S G
Sbjct: 545 VAVLTSRSEVFTWGKGANGRLGHGDTEDKRTPTLVEALRDR--HVKSLSCG 593



 Score = 71.2 bits (173), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 55/177 (31%), Positives = 83/177 (46%), Gaps = 7/177 (3%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q+     H A V + G+VFT G+      GH      I RP+LVE L       V  G
Sbjct: 262 VHQIVCGVRHVALVTRQGEVFTWGEEVGGRLGH-GIQVDISRPKLVEFLALTNIDFVACG 320

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
              T  ++  G + + G   H  G LGHG  +    PK ++ PLE +  V+ +A G  + 
Sbjct: 321 EYHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWIPKRVSGPLEGL-QVLSVACGTWHS 379

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
              T NG +++FG G+   LGHG +     P+ +Q+    G+  V+V+    H  A+
Sbjct: 380 ALATANGKLFTFGDGAFGVLGHGNRESVSYPKEVQSL--NGLKTVKVACSIWHTAAI 434



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/250 (25%), Positives = 103/250 (41%), Gaps = 31/250 (12%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVV 166
           QI  G  H  L++    VF+ G  + G LGHG       P+  + ++ T I+F       
Sbjct: 264 QIVCGVRHVALVTRQGEVFTWGEEVGGRLGHGIQVDISRPKLVEFLALTNIDF------- 316

Query: 167 QVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
            V+  E H   V  SG +F+ GD  ++    GH          R+   L+G+    V  G
Sbjct: 317 -VACGEYHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWIPKRVSGPLEGLQVLSVACG 375

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
              +   T  G + T G    G LGHG+      PK +  L  +   V++A    +  A+
Sbjct: 376 TWHSALATANGKLFTFGDGAFGVLGHGNRESVSYPKEVQSLNGL-KTVKVACSIWHTAAI 434

Query: 285 T----------GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 334
                       +  ++++G G    LGHG +   L P  + +      H  +++ G   
Sbjct: 435 VEVMGQTATSMSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFH--KIACGHTF 492

Query: 335 VVALDSSGYV 344
            VAL +SG+V
Sbjct: 493 TVALTTSGHV 502



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 76/165 (46%), Gaps = 4/165 (2%)

Query: 182 GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 241
           G+V+T G        +      +  PR +E+   +   Q+  G+     +T +G V T G
Sbjct: 226 GEVWTEGILPDGTASNETVKTDVLTPRPLESNVVLDVHQIVCGVRHVALVTRQGEVFTWG 285

Query: 242 SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC- 300
               G+LGHG  +D   PK +  L  + ++  +A G  +   V+ +G ++S+G G +   
Sbjct: 286 EEVGGRLGHGIQVDISRPKLVEFL-ALTNIDFVACGEYHTCVVSTSGDLFSWGDGIHNVG 344

Query: 301 -LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            LGHG       P+ + +   +G+ V+ V+ G  H     ++G +
Sbjct: 345 LLGHGSDISHWIPKRV-SGPLEGLQVLSVACGTWHSALATANGKL 388



 Score = 46.6 bits (109), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 81/184 (44%), Gaps = 27/184 (14%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETT-- 149
           + ++   S+ H++ IVE      Q  T       +S+  +F+ G      LGHG + T  
Sbjct: 420 KTVKVACSIWHTAAIVEVMG---QTATS------MSSRKLFTWGDGDKNRLGHGNKETYL 470

Query: 150 --QCVS-FTRINFPSAA--HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPI 204
              CVS     NF   A  H   V+        +  SG VFT G  +    G+  ++  +
Sbjct: 471 LPTCVSSLIDYNFHKIACGHTFTVA--------LTTSGHVFTMGGTAHGQLGNSISDGKL 522

Query: 205 FRPRLV-EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
             P LV + L G   +++  G +    LT R  V T G   +G+LGHGDT D+ TP  + 
Sbjct: 523 --PCLVQDRLVGEFVEEIACGAHHVAVLTSRSEVFTWGKGANGRLGHGDTEDKRTPTLVE 580

Query: 264 PLEE 267
            L +
Sbjct: 581 ALRD 584


>gi|302807678|ref|XP_002985533.1| hypothetical protein SELMODRAFT_122484 [Selaginella moellendorffii]
 gi|300146739|gb|EFJ13407.1| hypothetical protein SELMODRAFT_122484 [Selaginella moellendorffii]
          Length = 228

 Score = 77.4 bits (189), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 53/179 (29%), Positives = 88/179 (49%), Gaps = 4/179 (2%)

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
           V+V+   +H   +  SG V++ G  +    GH  T      P +V++L G+   Q+  G 
Sbjct: 38  VRVACGSSHTLALTGSGDVYSFGQGTFGALGH-GTTESCSSPVIVDSLWGLGIVQIACGD 96

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
           N +  LT+ G + + G   +GQLG G   +   P  +  L +   + Q+  G  Y +A+ 
Sbjct: 97  NHSCALTVEGQLFSWGRGKYGQLGCGSVENHLQPVPVTALSDR-LLTQVVCGADYTMAID 155

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            +G ++S+G G     GHG Q + L P+ + +      ++V+ SAG  H VAL S G V
Sbjct: 156 SDGQLFSWGHGHWGQTGHGTQDNILVPKLVCSLEND--NIVQASAGARHAVALTSGGGV 212



 Score = 70.9 bits (172), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 55/184 (29%), Positives = 89/184 (48%), Gaps = 8/184 (4%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G  HTL ++ S  V+S G    G LGHG  T  C S   ++      +VQ++  +
Sbjct: 38  VRVACGSSHTLALTGSGDVYSFGQGTFGALGHG-TTESCSSPVIVDSLWGLGIVQIACGD 96

Query: 173 NHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
           NH+  +   GQ+F+ G        CG  + +    +P  V AL      QV  G ++T  
Sbjct: 97  NHSCALTVEGQLFSWGRGKYGQLGCGSVENH---LQPVPVTALSDRLLTQVVCGADYTMA 153

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           +   G + + G    GQ GHG   +   PK +  LE   ++VQ +AG  + +A+T  G V
Sbjct: 154 IDSDGQLFSWGHGHWGQTGHGTQDNILVPKLVCSLEN-DNIVQASAGARHAVALTSGGGV 212

Query: 291 YSFG 294
           Y++G
Sbjct: 213 YAWG 216



 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 55/107 (51%), Gaps = 6/107 (5%)

Query: 239 TCGSNTHGQLGHGDT---LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
           + G    GQLG  D     + P P+ +    E+   V++A G S+ LA+TG+G VYSFG 
Sbjct: 3   SWGCGEFGQLGLKDAAGVFNSPLPRFLRGSREL-LFVRVACGSSHTLALTGSGDVYSFGQ 61

Query: 296 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           G+   LGHG       P  + +    G+ +V+++ GD H  AL   G
Sbjct: 62  GTFGALGHGTTESCSSPVIVDSLW--GLGIVQIACGDNHSCALTVEG 106


>gi|426236323|ref|XP_004012119.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Ovis aries]
          Length = 527

 Score = 77.4 bits (189), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 94/218 (43%), Gaps = 4/218 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  +F  G++ CG LG G +    +   R++  +   +  +S  S  H       G+VFT
Sbjct: 40  NDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLTGKKIACLSYGSGPHIVLATTEGEVFT 98

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN  +    +   L      +V  G   +  LT  G V   G N  G
Sbjct: 99  WGHNAYSQLGNGTTNAGLVPYHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 158

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T ++P P+ +    +   VV IA G    +AV   G V+ +G   N  LG G  
Sbjct: 159 QVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVFVWGYNGNGQLGLGSS 218

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            +  QP   +    +GI V RV+ G  H + L   G V
Sbjct: 219 GN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQV 254



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 99/209 (47%), Gaps = 3/209 (1%)

Query: 118 TGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 177
           +G +  L  +   VF+ G +    LG+G      V +      S   V++V+    H+  
Sbjct: 83  SGPHIVLATTEGEVFTWGHNAYSQLGNGTTNAGLVPYHISTNLSNKQVIEVACGSYHSLV 142

Query: 178 VLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
           +   G+VF  G N+S   G   T N+PI R R+   L+      +  G   +  +   G 
Sbjct: 143 LTSDGEVFAWGYNNSGQVGSGSTANQPIPR-RVTGCLQNKVVVNIACGQMCSMAVVNTGE 201

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           V   G N +GQLG G + ++PTP  +A L+ +  V ++A G ++ L +T  G VY++G+ 
Sbjct: 202 VFVWGYNGNGQLGLGSSGNQPTPCRVAALQGI-RVQRVACGYAHTLVLTDEGQVYAWGAN 260

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
           S   LG G + ++  P  +   + + I +
Sbjct: 261 SYGQLGTGNKSNQSYPTPVVVEKDRIIEI 289



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 83/177 (46%), Gaps = 5/177 (2%)

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG--VPCKQVTAGLNF 227
           ++ N   +   + ++F  G N   C G  D    I  PR +++L G  + C    +G + 
Sbjct: 29  SASNELLYTTVNDEIFVLGTNCCGCLGLGDVQSTI-EPRRLDSLTGKKIACLSYGSGPHI 87

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
               T  G V T G N + QLG+G T     P  I+       V+++A G  + L +T +
Sbjct: 88  V-LATTEGEVFTWGHNAYSQLGNGTTNAGLVPYHISTNLSNKQVIEVACGSYHSLVLTSD 146

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G V+++G  ++  +G G   ++  PR +    +  + VV ++ G    +A+ ++G V
Sbjct: 147 GEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKV-VVNIACGQMCSMAVVNTGEV 202


>gi|384939244|gb|AFI33227.1| putative E3 ubiquitin-protein ligase HERC6 isoform 1 [Macaca
           mulatta]
          Length = 1020

 Score = 77.4 bits (189), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 69/243 (28%), Positives = 111/243 (45%), Gaps = 23/243 (9%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 165
           +Q  +G  H+LL+ +N  V SCG +  G LG         PE  Q +    ++       
Sbjct: 26  LQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNVDL------ 79

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
             VS  + H+  V   G+VF  G  S    G  +     F P+ +  L G+   QV+ G 
Sbjct: 80  --VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGH 137

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             +  L+    V + G N+HGQLG G  +  + +P+ +  LE +  + Q+AAG ++  A+
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGI-PLAQVAAGGAHSFAL 196

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQ---PRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           +  G  + +GS S   L    ++  +Q   P +I   +  G  V+ +S GDEH   L   
Sbjct: 197 SLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLG--VIYISCGDEHTAVLIQD 254

Query: 342 GYV 344
           G V
Sbjct: 255 GKV 257



 Score = 71.6 bits (174), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 53/182 (29%), Positives = 97/182 (53%), Gaps = 6/182 (3%)

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           A ++Q ++ E H+  +L + +V +CGDNS    G R   R    P  ++AL+ +    V+
Sbjct: 23  AELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGEL-PEPIQALETLNVDLVS 81

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYM 281
            G   +  +  +G V   G+ + GQLG G+  +   TPK I  L  +  ++Q++ G  + 
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGI-KIIQVSCGHYHS 140

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           LA++ +  V+S+G  S+  LG G++   +  P+ +++   +GI + +V+AG  H  AL  
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSL--EGIPLAQVAAGGAHSFALSL 198

Query: 341 SG 342
            G
Sbjct: 199 CG 200



 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/228 (28%), Positives = 112/228 (49%), Gaps = 12/228 (5%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFT--RINFPSAAHVVQVSASE 172
           ++ G+ H+L + +   VF+ G+   G LG G    + +SFT  +I   +   ++QVS   
Sbjct: 80  VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIG--EFKEISFTPKKITTLNGIKIIQVSCGH 137

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  + +  QVF+ G NS    G          P+ V +L+G+P  QV AG   +  L+
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSFALS 197

Query: 233 IRGHVHTCGSNTHGQL---GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
           + G     GSN+ GQL   G    +    P SI  L+ +G V+ I+ G  +   +  +G 
Sbjct: 198 LCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLG-VIYISCGDEHTAVLIQDGK 256

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           V++FG  S+  LG+    ++  P+ ++  R  G+ V ++  G  H +A
Sbjct: 257 VFTFGDNSSGQLGYSPTPEKRGPQLVE--RIDGL-VSQIDCGSYHTLA 301



 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 61/187 (32%), Positives = 89/187 (47%), Gaps = 6/187 (3%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++ G YH+L +S +S VFS G +  G LG G E     S  R+       + QV+A  
Sbjct: 131 IQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGG 190

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPI--FRPRLVEALKGVPCKQVTAGLNFTGF 230
            H+  +   G  F  G NS+        N P+   +P  + ALK +    ++ G   T  
Sbjct: 191 AHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAV 250

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA-VTGNGV 289
           L   G V T G N+ GQLG+  T ++  P+ +  ++  G V QI  G  + LA V   G 
Sbjct: 251 LIQDGKVFTFGDNSSGQLGYSPTPEKRGPQLVERID--GLVSQIDCGSYHTLAYVHTTGQ 308

Query: 290 VYSFGSG 296
           V SFG G
Sbjct: 309 VISFGHG 315



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/153 (31%), Positives = 70/153 (45%), Gaps = 7/153 (4%)

Query: 193 FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD 252
           FC G   T+    + R  E   G    Q  +G   +  L     V +CG N+ GQLG   
Sbjct: 3   FCWG---TDSRELQRRRTERSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRR 59

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQ 311
                 P+ I  LE + +V  ++ G  + LAV   G V+++G+GS   LG GE +     
Sbjct: 60  APRGELPEPIQALETL-NVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFT 118

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           P+ I T    GI +++VS G  H +AL     V
Sbjct: 119 PKKITTL--NGIKIIQVSCGHYHSLALSKDSQV 149



 Score = 42.7 bits (99), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 63/137 (45%), Gaps = 25/137 (18%)

Query: 137 SLCGV-LGHGPETTQCVSFTRINFPSAAH------------VVQVSASENHAAFVLQSGQ 183
           SLCG   G G  +   ++ +  N P  ++            V+ +S  + H A ++Q G+
Sbjct: 197 SLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGK 256

Query: 184 VFTCGDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
           VFT GDNSS   G+  T  P  R P+LVE + G+   Q+  G   T       +VHT G 
Sbjct: 257 VFTFGDNSSGQLGYSPT--PEKRGPQLVERIDGL-VSQIDCGSYHT-----LAYVHTTGQ 308

Query: 243 NTHGQLGHGDTLDRPTP 259
                 GHG + D+  P
Sbjct: 309 VI--SFGHGPS-DKSKP 322


>gi|355569557|gb|EHH25458.1| Putative E3 ubiquitin-protein ligase HERC6 [Macaca mulatta]
          Length = 1020

 Score = 77.4 bits (189), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 69/243 (28%), Positives = 111/243 (45%), Gaps = 23/243 (9%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 165
           +Q  +G  H+LL+ +N  V SCG +  G LG         PE  Q +    ++       
Sbjct: 26  LQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNVDL------ 79

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
             VS  + H+  V   G+VF  G  S    G  +     F P+ +  L G+   QV+ G 
Sbjct: 80  --VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGH 137

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             +  L+    V + G N+HGQLG G  +  + +P+ +  LE +  + Q+AAG ++  A+
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGI-PLAQVAAGGAHSFAL 196

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQ---PRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           +  G  + +GS S   L    ++  +Q   P +I   +  G  V+ +S GDEH   L   
Sbjct: 197 SLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLG--VIYISCGDEHTAVLIQD 254

Query: 342 GYV 344
           G V
Sbjct: 255 GKV 257



 Score = 71.6 bits (174), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 53/182 (29%), Positives = 97/182 (53%), Gaps = 6/182 (3%)

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           A ++Q ++ E H+  +L + +V +CGDNS    G R   R    P  ++AL+ +    V+
Sbjct: 23  AELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGEL-PEPIQALETLNVDLVS 81

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYM 281
            G   +  +  +G V   G+ + GQLG G+  +   TPK I  L  +  ++Q++ G  + 
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGI-KIIQVSCGHYHS 140

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           LA++ +  V+S+G  S+  LG G++   +  P+ +++   +GI + +V+AG  H  AL  
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSL--EGIPLAQVAAGGAHSFALSL 198

Query: 341 SG 342
            G
Sbjct: 199 CG 200



 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 61/187 (32%), Positives = 89/187 (47%), Gaps = 6/187 (3%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++ G YH+L +S +S VFS G +  G LG G E     S  R+       + QV+A  
Sbjct: 131 IQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGG 190

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPI--FRPRLVEALKGVPCKQVTAGLNFTGF 230
            H+  +   G  F  G NS+        N P+   +P  + ALK +    ++ G   T  
Sbjct: 191 AHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAV 250

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA-VTGNGV 289
           L   G V T G N+ GQLG+  T ++  P+ +  ++  G V QI  G  + LA V   G 
Sbjct: 251 LIQDGKVFTFGDNSSGQLGYSPTPEKRGPQLVERID--GLVSQIDCGSYHTLAYVHTTGQ 308

Query: 290 VYSFGSG 296
           V SFG G
Sbjct: 309 VISFGHG 315



 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/228 (28%), Positives = 112/228 (49%), Gaps = 12/228 (5%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFT--RINFPSAAHVVQVSASE 172
           ++ G+ H+L + +   VF+ G+   G LG G    + +SFT  +I   +   ++QVS   
Sbjct: 80  VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIG--EFKEISFTPKKITTLNGIKIIQVSCGH 137

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  + +  QVF+ G NS    G          P+ V +L+G+P  QV AG   +  L+
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSFALS 197

Query: 233 IRGHVHTCGSNTHGQL---GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
           + G     GSN+ GQL   G    +    P SI  L+ +G V+ I+ G  +   +  +G 
Sbjct: 198 LCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLG-VIYISCGDEHTAVLIQDGK 256

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           V++FG  S+  LG+    ++  P+ ++  R  G+ V ++  G  H +A
Sbjct: 257 VFTFGDNSSGQLGYSPTPEKRGPQLVE--RIDGL-VSQIDCGSYHTLA 301



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/153 (31%), Positives = 70/153 (45%), Gaps = 7/153 (4%)

Query: 193 FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD 252
           FC G   T+    + R  E   G    Q  +G   +  L     V +CG N+ GQLG   
Sbjct: 3   FCWG---TDSRELQRRRTERSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRR 59

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQ 311
                 P+ I  LE + +V  ++ G  + LAV   G V+++G+GS   LG GE +     
Sbjct: 60  APRGELPEPIQALETL-NVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFT 118

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           P+ I T    GI +++VS G  H +AL     V
Sbjct: 119 PKKITTL--NGIKIIQVSCGHYHSLALSKDSQV 149



 Score = 42.7 bits (99), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 63/137 (45%), Gaps = 25/137 (18%)

Query: 137 SLCGV-LGHGPETTQCVSFTRINFPSAAH------------VVQVSASENHAAFVLQSGQ 183
           SLCG   G G  +   ++ +  N P  ++            V+ +S  + H A ++Q G+
Sbjct: 197 SLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGK 256

Query: 184 VFTCGDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
           VFT GDNSS   G+  T  P  R P+LVE + G+   Q+  G   T       +VHT G 
Sbjct: 257 VFTFGDNSSGQLGYSPT--PEKRGPQLVERIDGL-VSQIDCGSYHT-----LAYVHTTGQ 308

Query: 243 NTHGQLGHGDTLDRPTP 259
                 GHG + D+  P
Sbjct: 309 VI--SFGHGPS-DKSKP 322


>gi|327315376|ref|NP_001192151.1| regulator of chromosome condensation [Ciona intestinalis]
          Length = 477

 Score = 77.4 bits (189), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 71/243 (29%), Positives = 114/243 (46%), Gaps = 23/243 (9%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPE--TTQCVSFTRINF--PSAAHVVQV 168
           + + +G  H ++++ S  VF+ G    G +G      T +       N+  P+  H+ +V
Sbjct: 233 VDVDSGNDHLVMVTMSGKVFTMGCPDQGQIGRIGRYFTDRGRKRKTANYITPAKIHLRKV 292

Query: 169 SASEN----------HAAFVLQS-GQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGV 216
             S+           +  +VL S G V+  G N+    G  D  NR I  P  VE L  +
Sbjct: 293 RGSKKPVIVKVFCGSYTTWVLSSEGHVYGFGLNNYKQLGFPDGENRYI--PEYVETLSDI 350

Query: 217 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIA 275
            CKQ+  G + T  L  +G V+T G   +G+LGHG D ++   PK I  L ++ S   I 
Sbjct: 351 GCKQIAGGQHHTLVLDHKGSVYTIGRGDYGRLGHGSDVIEASEPKKINSLCDITS---IT 407

Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           A      AV  +G  Y +G G+N  L  G++ DE +P  +     +   V++V++G +H 
Sbjct: 408 ATSCVSFAVDKDGKAYGWGLGTNLQLTTGDEEDEWEPVELTGKNLEKRSVLQVASGGQHT 467

Query: 336 VAL 338
           V L
Sbjct: 468 VIL 470



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 70/227 (30%), Positives = 92/227 (40%), Gaps = 27/227 (11%)

Query: 114 MQITTGRYHT-LLISNSSVFSCGS--SLCGVLGHGPETTQC---VSFTRINFPSAAHVVQ 167
           + I+ G  HT  L     VF  GS     GV+G   E   C      T IN      VV 
Sbjct: 179 VHISAGDSHTCALTDGGKVFVWGSFRDGRGVIGLIKEEEVCKCPTQLTSIN----ETVVD 234

Query: 168 VSASENHAAFVLQSGQVFT--CGDNSSFC-CGHRDTNRPIFRP------------RLVEA 212
           V +  +H   V  SG+VFT  C D       G   T+R   R             R V  
Sbjct: 235 VDSGNDHLVMVTMSGKVFTMGCPDQGQIGRIGRYFTDRGRKRKTANYITPAKIHLRKVRG 294

Query: 213 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
            K     +V  G   T  L+  GHV+  G N + QLG  D  +R  P+ +  L ++G   
Sbjct: 295 SKKPVIVKVFCGSYTTWVLSSEGHVYGFGLNNYKQLGFPDGENRYIPEYVETLSDIG-CK 353

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTF 318
           QIA G  + L +   G VY+ G G    LGHG    E  +P+ I + 
Sbjct: 354 QIAGGQHHTLVLDHKGSVYTIGRGDYGRLGHGSDVIEASEPKKINSL 400



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/112 (34%), Positives = 53/112 (47%), Gaps = 11/112 (9%)

Query: 239 TCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G    GQLG G D + R  P  +A + +   V ++ AG  + + +T    +Y+FG   
Sbjct: 91  TVGQGDMGQLGLGEDIMSRKKPAIVASIADE-KVKKVVAGGMHTVCLTDQHKIYTFGCND 149

Query: 298 NFCLGHGEQHD--ELQPRAI---QTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            F LG     D  E +P+ I    T RR    VV +SAGD H  AL   G V
Sbjct: 150 EFALGRDTADDDSEYEPKLIVGPLTERR----VVHISAGDSHTCALTDGGKV 197



 Score = 42.7 bits (99), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 49/149 (32%), Positives = 71/149 (47%), Gaps = 18/149 (12%)

Query: 206 RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT---PKSI 262
           +P +V ++     K+V AG   T  LT +  ++T G N    LG  DT D  +   PK I
Sbjct: 111 KPAIVASIADEKVKKVVAGGMHTVCLTDQHKIYTFGCNDEFALGR-DTADDDSEYEPKLI 169

Query: 263 -APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG------EQHDELQPRAI 315
             PL E   VV I+AG S+  A+T  G V+ +GS   F  G G      E+     P  +
Sbjct: 170 VGPLTER-RVVHISAGDSHTCALTDGGKVFVWGS---FRDGRGVIGLIKEEEVCKCPTQL 225

Query: 316 QTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            +       VV V +G++H+V +  SG V
Sbjct: 226 TSINET---VVDVDSGNDHLVMVTMSGKV 251


>gi|297831070|ref|XP_002883417.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297329257|gb|EFH59676.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 1043

 Score = 77.4 bits (189), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 68/231 (29%), Positives = 109/231 (47%), Gaps = 20/231 (8%)

Query: 114 MQITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G +H+ L  +N  +F+ G    GVLGHG    + VS+ + +   +    V+V+ S
Sbjct: 361 LSVACGTWHSALATANGKLFTFGDGAFGVLGHG--NRESVSYPKEVQSLNGLKTVKVACS 418

Query: 172 ENHAAFVLQ----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
             H A +++          S ++FT GD      GH +    +  P  V +L      ++
Sbjct: 419 IWHTAAIVEVMGQTGTSMSSRKLFTWGDGDKNRLGHGNKETYLL-PTCVSSLIDYNFHKI 477

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSY 280
             G  FT  LT  GHV T G   HGQLG+  + D   P  +     VG  V+ IA G  +
Sbjct: 478 ACGHTFTVALTTSGHVFTMGGTAHGQLGNSIS-DGKLP-CLVQDRLVGEFVEEIACGDHH 535

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
           +  +T    V+++G G+N  LGHG+  D+  P  ++  R +  HV  +S G
Sbjct: 536 VAVLTSRSEVFTWGKGANGRLGHGDTEDKRTPTCVEALRDR--HVKSLSCG 584



 Score = 70.9 bits (172), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 55/177 (31%), Positives = 83/177 (46%), Gaps = 7/177 (3%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q+     H A V + G+VFT G+      GH      I RP+LVE L       V  G
Sbjct: 253 VHQIVCGVRHVALVTRQGEVFTWGEEVGGRLGH-GIQVDISRPKLVEFLALTNIDFVACG 311

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
              T  ++  G + + G   H  G LGHG  +    PK ++ PLE +  V+ +A G  + 
Sbjct: 312 EYHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWIPKRVSGPLEGL-QVLSVACGTWHS 370

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
              T NG +++FG G+   LGHG +     P+ +Q+    G+  V+V+    H  A+
Sbjct: 371 ALATANGKLFTFGDGAFGVLGHGNRESVSYPKEVQSL--NGLKTVKVACSIWHTAAI 425



 Score = 65.1 bits (157), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 65/249 (26%), Positives = 104/249 (41%), Gaps = 29/249 (11%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVV 166
           QI  G  H  L++    VF+ G  + G LGHG       P+  + ++ T I+F       
Sbjct: 255 QIVCGVRHVALVTRQGEVFTWGEEVGGRLGHGIQVDISRPKLVEFLALTNIDF------- 307

Query: 167 QVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
            V+  E H   V  SG +F+ GD  ++    GH          R+   L+G+    V  G
Sbjct: 308 -VACGEYHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWIPKRVSGPLEGLQVLSVACG 366

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-----VQIAAGPS 279
              +   T  G + T G    G LGHG+      PK +  L  + +V     +   A   
Sbjct: 367 TWHSALATANGKLFTFGDGAFGVLGHGNRESVSYPKEVQSLNGLKTVKVACSIWHTAAIV 426

Query: 280 YMLAVTGNGV----VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
            ++  TG  +    ++++G G    LGHG +   L P  + +      H  +++ G    
Sbjct: 427 EVMGQTGTSMSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFH--KIACGHTFT 484

Query: 336 VALDSSGYV 344
           VAL +SG+V
Sbjct: 485 VALTTSGHV 493



 Score = 48.1 bits (113), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 75/165 (45%), Gaps = 4/165 (2%)

Query: 182 GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 241
           G+V+T G               +  PR +E+   +   Q+  G+     +T +G V T G
Sbjct: 217 GEVWTEGILPDGTVSKETVKTDVLTPRPLESNVVLDVHQIVCGVRHVALVTRQGEVFTWG 276

Query: 242 SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC- 300
               G+LGHG  +D   PK +  L  + ++  +A G  +   V+ +G ++S+G G +   
Sbjct: 277 EEVGGRLGHGIQVDISRPKLVEFL-ALTNIDFVACGEYHTCVVSTSGDLFSWGDGIHNVG 335

Query: 301 -LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            LGHG       P+ + +   +G+ V+ V+ G  H     ++G +
Sbjct: 336 LLGHGSDISHWIPKRV-SGPLEGLQVLSVACGTWHSALATANGKL 379


>gi|224135109|ref|XP_002327568.1| predicted protein [Populus trichocarpa]
 gi|222836122|gb|EEE74543.1| predicted protein [Populus trichocarpa]
          Length = 973

 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 109/243 (44%), Gaps = 29/243 (11%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH------VV 166
           + +  G +HT ++S+S  +F+ G    GVLGHG       +   ++ P          V 
Sbjct: 415 LNVACGDWHTAIVSSSGQLFTYGDGSFGVLGHG-------NLLSVSQPKEVESLKGLLVK 467

Query: 167 QVSASENHAAFVLQ-----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
            V+    H A ++             G++FT GD      GH D  + +  P  V  L  
Sbjct: 468 SVACGSWHTAAIVDIIVDRFKFNGVGGKLFTWGDGDKGRLGHADLEKKLL-PTCVAQLVE 526

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
           +   QV+ G   T  LT  G V+T GS+ HGQLG+    D+        L+E   V +I+
Sbjct: 527 LDFDQVSCGRMLTVALTNTGKVYTMGSSVHGQLGNPHAKDKSIVIVEGKLKEE-FVKEIS 585

Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           +G  ++ A+T +G +Y++G G+N  LG G   D   P  ++  R   + V  ++ G    
Sbjct: 586 SGSYHVAALTSSGSLYTWGKGTNGQLGLGNVEDRNFPTLVEALR--DMQVQSIACGSNLT 643

Query: 336 VAL 338
            A+
Sbjct: 644 AAI 646



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 55/177 (31%), Positives = 90/177 (50%), Gaps = 7/177 (3%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  +S    HAA + + G+VF  G+ S    GH+  +  +  P++VE+L GV  K V  G
Sbjct: 307 VTNISLGRKHAALITKRGEVFCWGEGSRGKLGHK-VDMDVSSPKMVESLDGVHVKSVACG 365

Query: 225 LNFTGFLTIRGHVHTCGSNTHG-QLG-HGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
              T  LT  G ++  G N +G  LG    +  +  P+ I+ PL  V  ++ +A G  + 
Sbjct: 366 EYQTCALTDSGELYAWGENKYGANLGCEERSRSQWLPRRISGPLTGV-CILNVACGDWHT 424

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             V+ +G ++++G GS   LGHG      QP+ +++   KG+ V  V+ G  H  A+
Sbjct: 425 AIVSSSGQLFTYGDGSFGVLGHGNLLSVSQPKEVESL--KGLLVKSVACGSWHTAAI 479



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 66/244 (27%), Positives = 104/244 (42%), Gaps = 20/244 (8%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I+ GR H  LI+    VF  G    G LGH  +     S   +      HV  V+  E  
Sbjct: 310 ISLGRKHAALITKRGEVFCWGEGSRGKLGHKVDM-DVSSPKMVESLDGVHVKSVACGEYQ 368

Query: 175 AAFVLQSGQVFTCGDN---SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
              +  SG+++  G+N   ++  C  R  ++ + R R+   L GV    V  G   T  +
Sbjct: 369 TCALTDSGELYAWGENKYGANLGCEERSRSQWLPR-RISGPLTGVCILNVACGDWHTAIV 427

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG----- 286
           +  G + T G  + G LGHG+ L    PK +  L+ +  V  +A G  +  A+       
Sbjct: 428 SSSGQLFTYGDGSFGVLGHGNLLSVSQPKEVESLKGL-LVKSVACGSWHTAAIVDIIVDR 486

Query: 287 ---NGV---VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
              NGV   ++++G G    LGH +   +L P  +       +   +VS G    VAL +
Sbjct: 487 FKFNGVGGKLFTWGDGDKGRLGHADLEKKLLPTCVAQLVE--LDFDQVSCGRMLTVALTN 544

Query: 341 SGYV 344
           +G V
Sbjct: 545 TGKV 548



 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 71/142 (50%), Gaps = 8/142 (5%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+L+E+   +    ++ G      +T RG V   G  + G+LGH   +D  +PK +  L+
Sbjct: 296 PKLLESTVMLDVTNISLGRKHAALITKRGEVFCWGEGSRGKLGHKVDMDVSSPKMVESLD 355

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGS---GSNFCLGHGEQ-HDELQPRAIQTFRRKG 322
            V  V  +A G     A+T +G +Y++G    G+N  LG  E+   +  PR I +    G
Sbjct: 356 GV-HVKSVACGEYQTCALTDSGELYAWGENKYGAN--LGCEERSRSQWLPRRI-SGPLTG 411

Query: 323 IHVVRVSAGDEHVVALDSSGYV 344
           + ++ V+ GD H   + SSG +
Sbjct: 412 VCILNVACGDWHTAIVSSSGQL 433


>gi|384249755|gb|EIE23236.1| UVB-resistance 8 [Coccomyxa subellipsoidea C-169]
          Length = 434

 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/181 (31%), Positives = 89/181 (49%), Gaps = 5/181 (2%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  VS   +H+  +L +G   + G       GH D      +PR +  L    C  V +G
Sbjct: 16  VTSVSCGSSHSLALLSNGIALSWGRGEDGQLGHGDAEE-RKKPRAIFHLMQASCSAVCSG 74

Query: 225 LNFTGFLT-IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
             ++  L+  R  V++ G    G+LGHGD  D   P+ I  L    ++V++A G ++ LA
Sbjct: 75  AEYSVALSQPRNEVYSWGWGDFGRLGHGDCNDVFIPQPIRALAGR-NIVKVACGDTHTLA 133

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           VT  G ++SFG   N  LG G   D + P+ +++ R  G  V  ++ G EH +A  S+G 
Sbjct: 134 VTDTGELFSFGRNQNGQLGLGTTSDAILPQPVESLR--GQEVTSIACGGEHSLAATSAGD 191

Query: 344 V 344
           V
Sbjct: 192 V 192



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 100/230 (43%), Gaps = 5/230 (2%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           ++ G  H+L L+SN    S G    G LGHG    +       +   A+     S +E  
Sbjct: 19  VSCGSSHSLALLSNGIALSWGRGEDGQLGHGDAEERKKPRAIFHLMQASCSAVCSGAEYS 78

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
            A      +V++ G       GH D N  +F P+ + AL G    +V  G   T  +T  
Sbjct: 79  VALSQPRNEVYSWGWGDFGRLGHGDCND-VFIPQPIRALAGRNIVKVACGDTHTLAVTDT 137

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G + + G N +GQLG G T D   P+ +  L     V  IA G  + LA T  G V+++G
Sbjct: 138 GELFSFGRNQNGQLGLGTTSDAILPQPVESLRGQ-EVTSIACGGEHSLAATSAGDVFAWG 196

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            G    LG G   D   P  +     +G+ V  V+ G  H +A D +G V
Sbjct: 197 WGRYGNLGVGPPEDRHLPSQVHGL--EGVKVTSVACGWRHSIAADETGAV 244



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 103/234 (44%), Gaps = 10/234 (4%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G  HTL ++++  +FS G +  G LG G  T+  +    +       V  ++   
Sbjct: 122 VKVACGDTHTLAVTDTGELFSFGRNQNGQLGLG-TTSDAILPQPVESLRGQEVTSIACGG 180

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR--PRLVEALKGVPCKQVTAGLNFTGF 230
            H+     +G VF  G       G+     P  R  P  V  L+GV    V  G   +  
Sbjct: 181 EHSLAATSAGDVFAWGWGR---YGNLGVGPPEDRHLPSQVHGLEGVKVTSVACGWRHSIA 237

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
               G V+T G + +GQLGHGD +D+  PK++  L++   +V IA G  +  A   +G +
Sbjct: 238 ADETGAVYTFGWSKYGQLGHGDCIDQLVPKAVESLKD-SRIVLIAGGWRHTSAADDSGKL 296

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           YS+G      LG G   D   P  +Q      + +  +S G  H  A+  +G V
Sbjct: 297 YSWGWNKFGQLGIGSNTDSNAPVPVQGLNTSPVKL--LSCGWRHTFAVTEAGDV 348



 Score = 64.7 bits (156), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 57/198 (28%), Positives = 87/198 (43%), Gaps = 4/198 (2%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G  H+L  +++  VF+ G    G LG GP   + +  ++++      V  V+    H
Sbjct: 176 IACGGEHSLAATSAGDVFAWGWGRYGNLGVGPPEDRHLP-SQVHGLEGVKVTSVACGWRH 234

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           +    ++G V+T G +     GH D    +  P+ VE+LK      +  G   T      
Sbjct: 235 SIAADETGAVYTFGWSKYGQLGHGDCIDQLV-PKAVESLKDSRIVLIAGGWRHTSAADDS 293

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G +++ G N  GQLG G   D   P  +  L     V  ++ G  +  AVT  G V+S+G
Sbjct: 294 GKLYSWGWNKFGQLGIGSNTDSNAPVPVQGLN-TSPVKLLSCGWRHTFAVTEAGDVFSWG 352

Query: 295 SGSNFCLGHGEQHDELQP 312
            G N  LGH E  D   P
Sbjct: 353 RGVNGQLGHNEPKDTNAP 370



 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 82/181 (45%), Gaps = 14/181 (7%)

Query: 95  RFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVS 153
           R L S  H  + V+ ++    +  G  H++    + +V++ G S  G LGHG    Q V 
Sbjct: 211 RHLPSQVHGLEGVKVTS----VACGWRHSIAADETGAVYTFGWSKYGQLGHGDCIDQLVP 266

Query: 154 FTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCG---HRDTNRPIFRPRLV 210
              +     + +V ++    H +    SG++++ G N     G   + D+N P+     V
Sbjct: 267 -KAVESLKDSRIVLIAGGWRHTSAADDSGKLYSWGWNKFGQLGIGSNTDSNAPV----PV 321

Query: 211 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 270
           + L   P K ++ G   T  +T  G V + G   +GQLGH +  D   P  +A L  +GS
Sbjct: 322 QGLNTSPVKLLSCGWRHTFAVTEAGDVFSWGRGVNGQLGHNEPKDTNAPVRLAEL-SMGS 380

Query: 271 V 271
           +
Sbjct: 381 I 381


>gi|426344974|ref|XP_004039178.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Gorilla
           gorilla gorilla]
          Length = 982

 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 70/243 (28%), Positives = 108/243 (44%), Gaps = 23/243 (9%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 165
           +Q  +G  H+LL+ +N  V SCG +  G LG         PE  Q +    ++       
Sbjct: 26  LQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDL------ 79

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
             VS  + H+  V   G+VF  G  S    G  +     F P+ +  L G+   QV+ G 
Sbjct: 80  --VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGH 137

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             +  L+    V + G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A+
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGTHSFAL 196

Query: 285 TGNGVVYSFGSGSNFCL---GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           +  G  + +GS S   L   G        +P +I   +  G  VV +S GDEH   L   
Sbjct: 197 SLCGTSFGWGSNSAGQLALSGRNVPAQSNKPLSIGALKNLG--VVYISCGDEHTAVLTQD 254

Query: 342 GYV 344
           G V
Sbjct: 255 GKV 257



 Score = 72.0 bits (175), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 53/182 (29%), Positives = 97/182 (53%), Gaps = 6/182 (3%)

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           A ++Q ++ E H+  +L + +V +CGDNS    G R   R    P  ++AL+ +    V+
Sbjct: 23  AELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGEL-PEPIQALETLIVDLVS 81

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYM 281
            G   +  +  +G V   G+ + GQLG G+  +   TPK I  L  +  ++Q++ G  + 
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGI-KIIQVSCGHYHS 140

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           LA++ +  V+S+G  S+  LG G++   +  P+ +++   +GI + +V+AG  H  AL  
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGTHSFALSL 198

Query: 341 SG 342
            G
Sbjct: 199 CG 200



 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 111/228 (48%), Gaps = 12/228 (5%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFT--RINFPSAAHVVQVSASE 172
           ++ G+ H+L + +   VF+ G+   G LG G    + +SFT  +I   +   ++QVS   
Sbjct: 80  VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIG--EFKEISFTPKKITTLNGIKIIQVSCGH 137

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  + +  QVF+ G NS    G          P+ V +L+G+P  QV AG   +  L+
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGTHSFALS 197

Query: 233 IRGHVHTCGSNTHGQL---GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
           + G     GSN+ GQL   G         P SI  L+ +G VV I+ G  +   +T +G 
Sbjct: 198 LCGTSFGWGSNSAGQLALSGRNVPAQSNKPLSIGALKNLG-VVYISCGDEHTAVLTQDGK 256

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           V++FG   +  LG+    ++  P+ ++  R  G+ V ++  G  H +A
Sbjct: 257 VFTFGDNCSGQLGYSPTPEKRGPQLVE--RIDGL-VSQIDCGSYHTLA 301



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/187 (32%), Positives = 88/187 (47%), Gaps = 6/187 (3%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++ G YH+L +S +S VFS G +  G LG G E     S  R+       + QV+A  
Sbjct: 131 IQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGG 190

Query: 173 NHAAFVLQSGQVFTCGDNSS--FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            H+  +   G  F  G NS+       R+      +P  + ALK +    ++ G   T  
Sbjct: 191 THSFALSLCGTSFGWGSNSAGQLALSGRNVPAQSNKPLSIGALKNLGVVYISCGDEHTAV 250

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA-VTGNGV 289
           LT  G V T G N  GQLG+  T ++  P+ +  ++  G V QI  G  + LA V   G 
Sbjct: 251 LTQDGKVFTFGDNCSGQLGYSPTPEKRGPQLVERID--GLVSQIDCGSYHTLAYVHTTGQ 308

Query: 290 VYSFGSG 296
           V SFG G
Sbjct: 309 VVSFGHG 315



 Score = 54.7 bits (130), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 68/155 (43%), Gaps = 11/155 (7%)

Query: 193 FCCG--HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH 250
           FC G   R+  R     R      G    Q  +G   +  L     V +CG N+ GQLG 
Sbjct: 3   FCWGADSRELQR-----RRTAGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGR 57

Query: 251 GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDE 309
                   P+ I  LE +  V  ++ G  + LAV   G V+++G+GS   LG GE +   
Sbjct: 58  RGAQRGELPEPIQALETL-IVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEIS 116

Query: 310 LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             P+ I T    GI +++VS G  H +AL     V
Sbjct: 117 FTPKKITTLN--GIKIIQVSCGHYHSLALSKDSQV 149


>gi|355752291|gb|EHH56411.1| Guanine nucleotide exchange factor-related protein [Macaca
           fascicularis]
          Length = 458

 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 60/173 (34%), Positives = 89/173 (51%), Gaps = 8/173 (4%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
           +F+ G++  G LG G +    +     +F     V +++    H+A V   G +F CG N
Sbjct: 17  LFAWGANSYGQLGLGHKEDVLLPQQLNDFCKPRSVRRITGGGGHSAVVTDIGDLFVCGLN 76

Query: 191 SS--FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 248
                  GH + + P F P   ++L G P +QV  G +FT  LT  G V +CGSN+ GQL
Sbjct: 77  KDGQLGLGHTE-DIPYFTP--CKSLFGCPIQQVACGWDFTIILTENGQVLSCGSNSFGQL 133

Query: 249 GHGDTLDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
           G    L R   P++I   +E   VV IAAG  + LA T +G+V+ +G+G   C
Sbjct: 134 GVPHGLRRCVVPQAIELHKE--KVVCIAAGLRHALAATASGIVFQWGTGLASC 184



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 58/189 (30%), Positives = 85/189 (44%), Gaps = 12/189 (6%)

Query: 115 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+  G   T++++ N  V SCGS+  G LG      +CV    I       VV ++A   
Sbjct: 105 QVACGWDFTIILTENGQVLSCGSNSFGQLGVPHGLRRCVVPQAIEL-HKEKVVCIAAGLR 163

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHR---DTNRPIF----RPRLVEALKGVPCKQVTAGLN 226
           HA     SG VF  G   +  CG R       P+F     P  V  L+      V AG +
Sbjct: 164 HALAATASGIVFQWGTGLA-SCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSD 222

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVT 285
            +  LT  G V+  GSN HGQL   +    P P+ I A   +   V  + +G ++++A T
Sbjct: 223 HSASLTDAGEVYVWGSNKHGQLAT-EAAFLPVPQKIEAHCFQNEKVTAVWSGWTHLVAQT 281

Query: 286 GNGVVYSFG 294
             G V+++G
Sbjct: 282 ETGKVFTWG 290



 Score = 40.4 bits (93), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 62/253 (24%), Positives = 98/253 (38%), Gaps = 41/253 (16%)

Query: 116 ITTGRYHTLLISNSSVF--------SCGSSLCGVLGHGPETTQCVSFT-----RINFPSA 162
           I  G  H L  + S +         SCG  LC      P  T  + FT     R+     
Sbjct: 158 IAAGLRHALAATASGIVFQWGTGLASCGRRLC------PGQTLPLFFTAKEPSRVTGLEN 211

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA--LKGVPCKQ 220
           +  + V A  +H+A +  +G+V+  G N            P+  P+ +EA   +      
Sbjct: 212 SKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLATEAAFLPV--PQKIEAHCFQNEKVTA 269

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLG------HGDTLDR-----PTPKSI----APL 265
           V +G       T  G V T G   +GQLG       G  L++     P  + +    + L
Sbjct: 270 VWSGWTHLVAQTETGKVFTWGRADYGQLGRKLETYEGWKLEKQDTFLPCSRLLNNMPSSL 329

Query: 266 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
             +    +++ G  + LAV G GV YS+G   +   G G + +   P+ +Q        +
Sbjct: 330 HCLTGATEVSCGSEHNLAVIG-GVCYSWGWNEHGMCGDGTEANIWAPKPVQALLSSSGLL 388

Query: 326 VRVSAGDEHVVAL 338
           V   AG  H +AL
Sbjct: 389 VGCGAG--HSLAL 399


>gi|449460213|ref|XP_004147840.1| PREDICTED: protein RCC2 homolog [Cucumis sativus]
          Length = 543

 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 68/209 (32%), Positives = 96/209 (45%), Gaps = 26/209 (12%)

Query: 132 FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNS 191
           ++ G +  G LGHG +  Q    T ++  S   VV+  A  NH   V + G   + G N 
Sbjct: 81  YTWGRNEKGQLGHG-DLIQRDRPTIVSDLSKYKVVKAGAGRNHTVVVTEDGNSLSFGWNK 139

Query: 192 SFCCGHRDTNRPIFRPR---LVEALKGVPCKQVTAGLNFTGFLT-IRG-HVHTCGSNTHG 246
               G       I       LV  +K   C     G  FT +LT I G  + T G   +G
Sbjct: 140 HGQLGSGSIKNEIESSPVRCLVSEVKTTAC-----GGEFTAWLTSIEGASILTAGLPQYG 194

Query: 247 QLGHG-----DTLD---------RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
           QLGHG     +T D         +P P++IA L     +V++A G ++ +AV  NG VY+
Sbjct: 195 QLGHGTDNEYNTKDSSVRLAYEAQPRPRAIASLAGE-KIVKVACGTNHTVAVDSNGFVYT 253

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRK 321
           +G G    LGH EQ DE  PR +  F+R+
Sbjct: 254 WGFGGYGRLGHKEQKDEWAPRRVDIFQRR 282



 Score = 54.7 bits (130), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 64/230 (27%), Positives = 94/230 (40%), Gaps = 23/230 (10%)

Query: 134 CGSSLCGVLGH--GPETTQCVSFTRINFPSAAHVVQVSAS---ENHAAFVLQSGQVFTCG 188
           CG++   ++G   GP     VS TR+  P     ++  AS     H   +   G+ +T G
Sbjct: 26  CGATSWDIIGRKKGPVEGNLVSPTRLR-PLVGIDIRFVASGCTSCHCVALDVEGRCYTWG 84

Query: 189 DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 248
            N     GH D  +   RP +V  L      +  AG N T  +T  G+  + G N HGQL
Sbjct: 85  RNEKGQLGHGDLIQR-DRPTIVSDLSKYKVVKAGAGRNHTVVVTEDGNSLSFGWNKHGQL 143

Query: 249 GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG--NGVVYSFGSGSNFCLGHGEQ 306
           G G   +      +  L  V  V   A G  +   +T      + + G      LGHG  
Sbjct: 144 GSGSIKNEIESSPVRCL--VSEVKTTACGGEFTAWLTSIEGASILTAGLPQYGQLGHGTD 201

Query: 307 HD------------ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           ++            E QPR        G  +V+V+ G  H VA+DS+G+V
Sbjct: 202 NEYNTKDSSVRLAYEAQPRPRAIASLAGEKIVKVACGTNHTVAVDSNGFV 251



 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 65/140 (46%), Gaps = 5/140 (3%)

Query: 181 SGQVFTCGDNSSFCCGHRD--TNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 236
           +G++  CG  S    G +       +  P  +  L G+  + V +G        L + G 
Sbjct: 20  AGELLFCGATSWDIIGRKKGPVEGNLVSPTRLRPLVGIDIRFVASGCTSCHCVALDVEGR 79

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            +T G N  GQLGHGD + R  P  ++ L +   VV+  AG ++ + VT +G   SFG  
Sbjct: 80  CYTWGRNEKGQLGHGDLIQRDRPTIVSDLSKY-KVVKAGAGRNHTVVVTEDGNSLSFGWN 138

Query: 297 SNFCLGHGEQHDELQPRAIQ 316
            +  LG G   +E++   ++
Sbjct: 139 KHGQLGSGSIKNEIESSPVR 158


>gi|313226881|emb|CBY22026.1| unnamed protein product [Oikopleura dioica]
          Length = 920

 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/245 (25%), Positives = 114/245 (46%), Gaps = 21/245 (8%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           M I +G  HTL++  N+ V+  GS+  G LG G +  +  +   + F +   V  +    
Sbjct: 282 MDIGSGDRHTLILDVNNVVYGVGSNDLGQLGFGSQMPRIENPEPVKFSTNRPVQAIGTGA 341

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           + + F++    VFTCG+  + C GH   ++    P +V+ L      +++AG      LT
Sbjct: 342 DFSVFLMNK-MVFTCGNGENGCLGHGSEHKSSMFPNMVQDLISYDVVKISAGYKHVLALT 400

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG--PSYMLAVTGNGVV 290
             G+V++ G    G+LGHG      +PK I  L+E   + +I AG   S+ + ++GN  +
Sbjct: 401 SDGNVYSWGCGELGRLGHGGQGSEFSPKKITSLQE--KIKEIYAGYDSSFFIGISGN--M 456

Query: 291 YSFGSGSNFCLGHGEQ---------HDELQPRAIQTFRRKGIH----VVRVSAGDEHVVA 337
           Y  GS  +  +G  ++         H  + P        + ++    + ++S   +H V 
Sbjct: 457 YVCGSNRDNKIGLQKRSMLDIFRLGHSRIPPYKDTPILSRQLNSNQTISKISQSRDHTVV 516

Query: 338 LDSSG 342
           L S+G
Sbjct: 517 LTSTG 521



 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/138 (34%), Positives = 69/138 (50%), Gaps = 16/138 (11%)

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR---PTPKSIA---PLEE 267
           KG+    + +G   T  L +   V+  GSN  GQLG G  + R   P P   +   P++ 
Sbjct: 277 KGLNIMDIGSGDRHTLILDVNNVVYGVGSNDLGQLGFGSQMPRIENPEPVKFSTNRPVQA 336

Query: 268 VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD-ELQPRAIQTFRRKGIHVV 326
           +G+     A  S  L    N +V++ G+G N CLGHG +H   + P  +Q        VV
Sbjct: 337 IGT----GADFSVFLM---NKMVFTCGNGENGCLGHGSEHKSSMFPNMVQDL--ISYDVV 387

Query: 327 RVSAGDEHVVALDSSGYV 344
           ++SAG +HV+AL S G V
Sbjct: 388 KISAGYKHVLALTSDGNV 405


>gi|145539346|ref|XP_001455363.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124423171|emb|CAK87966.1| unnamed protein product [Paramecium tetraurelia]
          Length = 401

 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 65/241 (26%), Positives = 108/241 (44%), Gaps = 25/241 (10%)

Query: 125 LISNSSVFSCGSSLCGVLGHG---PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQS 181
           L S  S+F+ GSS  G LG+     +  + VS  ++      +V QV   +NH+A +   
Sbjct: 9   LFSTGSLFTWGSS-NGSLGYAVGSQQQMKGVSMPQLVKGFNNNVAQVQMGQNHSALITSE 67

Query: 182 GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK--GVPCKQVTAGLNFTGFLTIRGHVHT 239
           G+++T G  +S   GH + ++    P+LVE      +  KQV  G   T  LT  G V T
Sbjct: 68  GELYTWGTGNSGQLGH-NNDKDYITPQLVEFFTKHNLKVKQVALGDYHTVALTHDGDVWT 126

Query: 240 CGSNTH-------------GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
            G                 G LGHG++ +R TP  +  L  +  +  I +G  +  A+  
Sbjct: 127 WGYGGKEQNFLMDLLFLQVGALGHGNSKNRYTPTPVKALRSLKKIKYIQSGLRFTNAINE 186

Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF-----RRKGIHVVRVSAGDEHVVALDSS 341
           N  +Y +G G     G G       P+  + F     +++ + +V++ + + + VAL S 
Sbjct: 187 NNELYVWGKGDYGVFGDGNNKSFNIPQRNEFFEGYLKKKQNLSIVKLKSCNNYSVALMSD 246

Query: 342 G 342
           G
Sbjct: 247 G 247



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 59/118 (50%), Gaps = 4/118 (3%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG---SVVQIAAGPSYMLAVTG 286
           +L   G + T GS ++G LG+     +       P    G   +V Q+  G ++   +T 
Sbjct: 8   YLFSTGSLFTWGS-SNGSLGYAVGSQQQMKGVSMPQLVKGFNNNVAQVQMGQNHSALITS 66

Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            G +Y++G+G++  LGH    D + P+ ++ F +  + V +V+ GD H VAL   G V
Sbjct: 67  EGELYTWGTGNSGQLGHNNDKDYITPQLVEFFTKHNLKVKQVALGDYHTVALTHDGDV 124



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 53/208 (25%), Positives = 92/208 (44%), Gaps = 33/208 (15%)

Query: 115 QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPE----TTQCVSF-TRINFPSAAHVVQV 168
           Q+  G+ H+ LI S   +++ G+   G LGH  +    T Q V F T+ N      V QV
Sbjct: 53  QVQMGQNHSALITSEGELYTWGTGNSGQLGHNNDKDYITPQLVEFFTKHNLK----VKQV 108

Query: 169 SASENHAAFVLQSGQVFTCG---DNSSF----------CCGHRDT-NRPIFRPRLVEALK 214
           +  + H   +   G V+T G      +F            GH ++ NR  + P  V+AL+
Sbjct: 109 ALGDYHTVALTHDGDVWTWGYGGKEQNFLMDLLFLQVGALGHGNSKNR--YTPTPVKALR 166

Query: 215 GVP-CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE------E 267
            +   K + +GL FT  +     ++  G   +G  G G+      P+     E      +
Sbjct: 167 SLKKIKYIQSGLRFTNAINENNELYVWGKGDYGVFGDGNNKSFNIPQRNEFFEGYLKKKQ 226

Query: 268 VGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
             S+V++ +  +Y +A+  +G +Y +GS
Sbjct: 227 NLSIVKLKSCNNYSVALMSDGNLYGWGS 254


>gi|403352920|gb|EJY75989.1| Kinesin motor domain containing protein [Oxytricha trifallax]
          Length = 1386

 Score = 77.0 bits (188), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 47/168 (27%), Positives = 89/168 (52%), Gaps = 12/168 (7%)

Query: 167  QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
            QV+ ++++  FV  SG+   CG+        ++++  +  P   +A       Q++ G +
Sbjct: 928  QVNKNQSYKVFVWGSGKDGRCGNG-------KESSEKL--PN--QANTSHNFTQLSCGYH 976

Query: 227  FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
             +  +T  G + + G    GQLGHGDT +   P  I  L ++  ++Q++ G  + +A++ 
Sbjct: 977  HSAAVTSDGMILSWGRGIFGQLGHGDTENYSLPTPIEALVKI-QIIQVSCGWQHSMALSS 1035

Query: 287  NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 334
             G ++S+G G +  LGHG+ +D L P+ I  FR+  I+V  ++ G  H
Sbjct: 1036 QGRIFSWGYGEDGQLGHGDTNDYLLPKEIDFFRKNSINVGMIACGHSH 1083



 Score = 43.9 bits (102), Expect = 0.12,   Method: Composition-based stats.
 Identities = 61/254 (24%), Positives = 103/254 (40%), Gaps = 50/254 (19%)

Query: 116  ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            ++ G  HT +++ S  +++ GS L G LG   E  +       ++PS+        +E++
Sbjct: 1146 LSLGVTHTAIVTRSGELYTGGSMLDGQLGVNYEAAK----NDQSYPSSLSNTHQLINESN 1201

Query: 175  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
            ++F+ Q        D        +  + PI+R     A       QV+ G  FT  L  R
Sbjct: 1202 SSFINQFK------DQKEL----KSQSLPIYRVDFFSAQN--KATQVSCGDAFTIVLNER 1249

Query: 235  GHVHTCGSNTHGQLG--HGDTLDR-------------------------PTPKSIAPLEE 267
              V+  G  +HG+LG  +G  L++                           P+ +  L +
Sbjct: 1250 NEVYAFGKLSHGRLGVGNGQNLNQQKTNQLKQSIQNQTYQSTEGSNDCIAEPQLLQSLSQ 1309

Query: 268  VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR 327
               VVQI+AG  +   VT +G +Y++G      LG G+   +     + T   KG+   +
Sbjct: 1310 SEKVVQISAGCRHAACVTDSGKLYAWGFNFYEQLGLGDSEKDFD---VPTKVSKGLQSSK 1366

Query: 328  ---VSAGDEHVVAL 338
               VS G  H  AL
Sbjct: 1367 VKFVSCGYFHTGAL 1380



 Score = 42.0 bits (97), Expect = 0.38,   Method: Composition-based stats.
 Identities = 35/118 (29%), Positives = 53/118 (44%), Gaps = 9/118 (7%)

Query: 85   RCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLG 143
            RC GN K      +S E   +   TS    Q++ G +H+  + S+  + S G  + G LG
Sbjct: 947  RC-GNGK------ESSEKLPNQANTSHNFTQLSCGYHHSAAVTSDGMILSWGRGIFGQLG 999

Query: 144  HGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN 201
            HG +T      T I       ++QVS    H+  +   G++F+ G       GH DTN
Sbjct: 1000 HG-DTENYSLPTPIEALVKIQIIQVSCGWQHSMALSSQGRIFSWGYGEDGQLGHGDTN 1056


>gi|328873771|gb|EGG22137.1| regulator of chromosome condensation domain-containing protein
           [Dictyostelium fasciculatum]
          Length = 1859

 Score = 77.0 bits (188), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 80/289 (27%), Positives = 121/289 (41%), Gaps = 69/289 (23%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLC-----GVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           I+ G Y++  L  N  V+  G           LG+G    Q +  T++   S + VV VS
Sbjct: 629 ISCGSYYSAALTENGDVYMWGRGSVKNPPLSTLGNGSLEDQLLP-TKVE--SLSEVVLVS 685

Query: 170 ASENHAAFVLQSGQVFT--CGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLN 226
               H+A +  +G++ T  CG++     GH D  N+ I  P++V+ +      QV  G  
Sbjct: 686 IGYYHSAALKSNGELLTWGCGEDGQL--GHGDVLNQTI--PKVVQTMTSHWVTQVQCGEK 741

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT- 285
            T  LT  G V T G++ +GQLG GDT    TP  +  LE+  +++QIA G ++   +T 
Sbjct: 742 HTICLTKNGKVFTWGTSEYGQLGLGDTQKNCTPMLVTSLEKY-NIIQIACGSTHCAVLTN 800

Query: 286 -------GNGV----------------------------------------VYSFGSGSN 298
                  GNG                                         VY++GSG  
Sbjct: 801 AREVLVFGNGAAMGSANIISVPMMVPALKHLNIERLSCGHYSTAALTECGDVYTWGSGQE 860

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSLC 347
             LGHG    EL P+ +   R + I   ++S G  H+  L  SG +  C
Sbjct: 861 --LGHGTNQSELHPKLVDGLRSQSIR--QISCGGRHMAFLTDSGKIYTC 905



 Score = 75.5 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 65/231 (28%), Positives = 106/231 (45%), Gaps = 13/231 (5%)

Query: 109 TSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ 167
           TS    Q+  G  HT+ L  N  VF+ G+S  G LG G     C      +     +++Q
Sbjct: 729 TSHWVTQVQCGEKHTICLTKNGKVFTWGTSEYGQLGLGDTQKNCTPMLVTSL-EKYNIIQ 787

Query: 168 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
           ++    H A +  + +V   G+ ++       +   I  P +V ALK +  ++++ G   
Sbjct: 788 IACGSTHCAVLTNAREVLVFGNGAAM-----GSANIISVPMMVPALKHLNIERLSCGHYS 842

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           T  LT  G V+T GS    +LGHG       PK +  L    S+ QI+ G  +M  +T +
Sbjct: 843 TAALTECGDVYTWGSGQ--ELGHGTNQSELHPKLVDGLRS-QSIRQISCGGRHMAFLTDS 899

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           G +Y+ G      LGH  Q D+ +P+ I +  +     + VS G+ H  +L
Sbjct: 900 GKIYTCGKDPFGQLGHA-QGDQNKPKKIDSLLKTTF--ISVSCGENHNASL 947


>gi|242091255|ref|XP_002441460.1| hypothetical protein SORBIDRAFT_09g027250 [Sorghum bicolor]
 gi|241946745|gb|EES19890.1| hypothetical protein SORBIDRAFT_09g027250 [Sorghum bicolor]
          Length = 1020

 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 109/228 (47%), Gaps = 14/228 (6%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAA-- 163
           + ++ G +H+ L ++S  VF+ G    G LGHG       P+  + +S  R    +    
Sbjct: 365 LSVSCGSWHSALTTSSGKVFTFGDGTFGALGHGKRETVGYPKEVEALSGFRTMKVACGLW 424

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
           H   +  S NH +  + S +++T G       GH D +  +  P  V++L      QV  
Sbjct: 425 HSAAIVESSNHVSINVISRKLYTWGAGDKNQLGHGDKDSRLV-PTCVQSLIDYSFHQVAC 483

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G + T  L+  GHV T GS+++GQLG+  + D   P  +        V +I+ G  ++  
Sbjct: 484 GHSMTIALSTSGHVFTMGSSSNGQLGNPKS-DGKQPIPVQDRLSGELVEEISCGSCHVAV 542

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
           +T    VY++G G+N  LGHG   D+ +P  ++  + +  HV  ++ G
Sbjct: 543 LTSRSEVYTWGMGANGRLGHGGVEDKKKPTLVEALKDR--HVKSIACG 588



 Score = 70.9 bits (172), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 83/298 (27%), Positives = 117/298 (39%), Gaps = 73/298 (24%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINF------ 159
            QI  G  H  L +    VF+ G  L G LGHG       P+  + ++ + + +      
Sbjct: 258 QQIACGYRHIALTTRQGEVFAWGEELGGRLGHGTDADISRPKLVEALAVSNVEYIACGEF 317

Query: 160 ---------------------------PSAAH--------------VVQVSASENHAAFV 178
                                        A+H              V+ VS    H+A  
Sbjct: 318 HTCAVTASGDLYTWGDGYYNVGLLGNGAGASHWLPKRVSGPLEGVQVLSVSCGSWHSALT 377

Query: 179 LQSGQVFTCGDNSSFCCGH--RDTNRPIFRPRLVEALKGVPCKQVTAGL----------N 226
             SG+VFT GD +    GH  R+T   +  P+ VEAL G    +V  GL          N
Sbjct: 378 TSSGKVFTFGDGTFGALGHGKRET---VGYPKEVEALSGFRTMKVACGLWHSAAIVESSN 434

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
                 I   ++T G+    QLGHGD   R  P  +  L +  S  Q+A G S  +A++ 
Sbjct: 435 HVSINVISRKLYTWGAGDKNQLGHGDKDSRLVPTCVQSLIDY-SFHQVACGHSMTIALST 493

Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           +G V++ GS SN  LG+  + D  QP  +Q  R  G  V  +S G  HV  L S   V
Sbjct: 494 SGHVFTMGSSSNGQLGN-PKSDGKQPIPVQD-RLSGELVEEISCGSCHVAVLTSRSEV 549



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/186 (30%), Positives = 93/186 (50%), Gaps = 8/186 (4%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++    H A   + G+VF  G+      GH  T+  I RP+LVEAL     + +  G
Sbjct: 257 VQQIACGYRHIALTTRQGEVFAWGEELGGRLGH-GTDADISRPKLVEALAVSNVEYIACG 315

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
              T  +T  G ++T G   +  G LG+G       PK ++ PLE V  V+ ++ G  + 
Sbjct: 316 EFHTCAVTASGDLYTWGDGYYNVGLLGNGAGASHWLPKRVSGPLEGV-QVLSVSCGSWHS 374

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DS 340
              T +G V++FG G+   LGHG++     P+ ++     G   ++V+ G  H  A+ +S
Sbjct: 375 ALTTSSGKVFTFGDGTFGALGHGKRETVGYPKEVEAL--SGFRTMKVACGLWHSAAIVES 432

Query: 341 SGYVSL 346
           S +VS+
Sbjct: 433 SNHVSI 438



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 78/169 (46%), Gaps = 12/169 (7%)

Query: 182 GQVFT----CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
           G+V+T       ++++ C   D    I  P+ +E+   +  +Q+  G       T +G V
Sbjct: 221 GEVWTDVIPAEGSTNYLCSKAD----ILIPKPLESDVVLDVQQIACGYRHIALTTRQGEV 276

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG- 296
              G    G+LGHG   D   PK +  L  V +V  IA G  +  AVT +G +Y++G G 
Sbjct: 277 FAWGEELGGRLGHGTDADISRPKLVEAL-AVSNVEYIACGEFHTCAVTASGDLYTWGDGY 335

Query: 297 -SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            +   LG+G       P+ + +   +G+ V+ VS G  H     SSG V
Sbjct: 336 YNVGLLGNGAGASHWLPKRV-SGPLEGVQVLSVSCGSWHSALTTSSGKV 383



 Score = 45.8 bits (107), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 82/184 (44%), Gaps = 18/184 (9%)

Query: 114 MQITTGRYHTLLISNSS-----------VFSCGSSLCGVLGHGPETTQCVSFTRINFPSA 162
           M++  G +H+  I  SS           +++ G+     LGHG + ++ V  T +     
Sbjct: 417 MKVACGLWHSAAIVESSNHVSINVISRKLYTWGAGDKNQLGHGDKDSRLVP-TCVQSLID 475

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH--RDTNRPIFRPRLVEALKGVPCKQ 220
               QV+   +    +  SG VFT G +S+   G+   D  +PI    + + L G   ++
Sbjct: 476 YSFHQVACGHSMTIALSTSGHVFTMGSSSNGQLGNPKSDGKQPI---PVQDRLSGELVEE 532

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           ++ G      LT R  V+T G   +G+LGHG   D+  P  +  L++   V  IA G ++
Sbjct: 533 ISCGSCHVAVLTSRSEVYTWGMGANGRLGHGGVEDKKKPTLVEALKDR-HVKSIACGSNF 591

Query: 281 MLAV 284
              +
Sbjct: 592 TTCI 595


>gi|157849750|gb|ABV89658.1| UVB-resistance protein UVR8 [Brassica rapa]
          Length = 537

 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 70/214 (32%), Positives = 101/214 (47%), Gaps = 26/214 (12%)

Query: 132 FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNS 191
           ++ G +  G LGHG +  Q    T ++  S   +V+  A  NH   V   G+ F  G N 
Sbjct: 79  YTWGRNEKGQLGHG-DMIQRDRPTVVSGLSKYKIVKAGAGRNHTVVVSDEGRSFAFGWNK 137

Query: 192 SFCCGHRDTNRPIFRPRLVEALKGVPC---KQVTA---GLNFTGFL--TIRGHVHTCGSN 243
               G   T +  F    VE+   VPC    +VT+   G +FT +L  T    + T G  
Sbjct: 138 HGQLG-LGTAKNGFVSVEVESSP-VPCVVSDEVTSIACGADFTVWLSSTEGASILTAGLP 195

Query: 244 THGQLGHGDTLD--------------RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
            +GQLGHG   +              +P PK+IA L    ++V++A G ++ +AV  NG 
Sbjct: 196 QYGQLGHGTDNEFNMKDGSVKLAYEAQPRPKAIASLAGE-TIVKVACGANHTVAVDKNGF 254

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 323
           VY++G G    LGH EQ DE  PR I  F+R  +
Sbjct: 255 VYTWGFGGYGRLGHREQKDEWSPRRIDVFQRNNV 288



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 51/181 (28%), Positives = 71/181 (39%), Gaps = 19/181 (10%)

Query: 182 GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 241
           G+ +T G N     GH D  +   RP +V  L      +  AG N T  ++  G     G
Sbjct: 76  GRCYTWGRNEKGQLGHGDMIQRD-RPTVVSGLSKYKIVKAGAGRNHTVVVSDEGRSFAFG 134

Query: 242 SNTHGQLGHGDTLDR----PTPKSIAPLEEVGSVVQIAAGPSY--MLAVTGNGVVYSFGS 295
            N HGQLG G   +         S  P      V  IA G  +   L+ T    + + G 
Sbjct: 135 WNKHGQLGLGTAKNGFVSVEVESSPVPCVVSDEVTSIACGADFTVWLSSTEGASILTAGL 194

Query: 296 GSNFCLGHGEQHD------------ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
                LGHG  ++            E QPR        G  +V+V+ G  H VA+D +G+
Sbjct: 195 PQYGQLGHGTDNEFNMKDGSVKLAYEAQPRPKAIASLAGETIVKVACGANHTVAVDKNGF 254

Query: 344 V 344
           V
Sbjct: 255 V 255



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 59/128 (46%), Gaps = 4/128 (3%)

Query: 180 QSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 236
           + G++  CG  S    G R      +  P  +  L GV  + V +G        L + G 
Sbjct: 18  KGGELLFCGATSWDIVGRRKGVEGNLLSPTRLRPLLGVNIRFVASGCASCHCVALDVEGR 77

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            +T G N  GQLGHGD + R  P  ++ L +   +V+  AG ++ + V+  G  ++FG  
Sbjct: 78  CYTWGRNEKGQLGHGDMIQRDRPTVVSGLSKY-KIVKAGAGRNHTVVVSDEGRSFAFGWN 136

Query: 297 SNFCLGHG 304
            +  LG G
Sbjct: 137 KHGQLGLG 144


>gi|15229409|ref|NP_188968.1| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
 gi|332643224|gb|AEE76745.1| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
          Length = 1045

 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 68/231 (29%), Positives = 109/231 (47%), Gaps = 20/231 (8%)

Query: 114 MQITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G +H+ L  +N  +F+ G    GVLGHG    + VS+ + +   +    V+V+ S
Sbjct: 361 LSVACGTWHSALATANGKLFTFGDGAFGVLGHG--NRESVSYPKEVQSLNGLKTVKVACS 418

Query: 172 ENHAAFVLQ----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
             H A +++          S ++FT GD      GH +    +  P  V +L      ++
Sbjct: 419 IWHTAAIVEVMGQTATSMSSRKLFTWGDGDKNRLGHGNKETYLL-PTCVSSLIDYNFHKI 477

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSY 280
             G  FT  LT  GHV T G   HGQLG+  + D   P  +     VG  V+ IA G  +
Sbjct: 478 ACGHTFTVALTTSGHVFTMGGTAHGQLGNSIS-DGKLP-CLVQDRLVGEFVEEIACGAHH 535

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
           +  +T    V+++G G+N  LGHG+  D+  P  ++  R +  HV  +S G
Sbjct: 536 VAVLTSRSEVFTWGKGANGRLGHGDTEDKRTPTLVEALRDR--HVKSLSCG 584



 Score = 70.9 bits (172), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 55/177 (31%), Positives = 83/177 (46%), Gaps = 7/177 (3%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q+     H A V + G+VFT G+      GH      I RP+LVE L       V  G
Sbjct: 253 VHQIVCGVRHVALVTRQGEVFTWGEEVGGRLGH-GIQVDISRPKLVEFLALTNIDFVACG 311

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
              T  ++  G + + G   H  G LGHG  +    PK ++ PLE +  V+ +A G  + 
Sbjct: 312 EYHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWIPKRVSGPLEGL-QVLSVACGTWHS 370

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
              T NG +++FG G+   LGHG +     P+ +Q+    G+  V+V+    H  A+
Sbjct: 371 ALATANGKLFTFGDGAFGVLGHGNRESVSYPKEVQSL--NGLKTVKVACSIWHTAAI 425



 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/250 (25%), Positives = 103/250 (41%), Gaps = 31/250 (12%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVV 166
           QI  G  H  L++    VF+ G  + G LGHG       P+  + ++ T I+F       
Sbjct: 255 QIVCGVRHVALVTRQGEVFTWGEEVGGRLGHGIQVDISRPKLVEFLALTNIDF------- 307

Query: 167 QVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
            V+  E H   V  SG +F+ GD  ++    GH          R+   L+G+    V  G
Sbjct: 308 -VACGEYHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWIPKRVSGPLEGLQVLSVACG 366

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
              +   T  G + T G    G LGHG+      PK +  L  +   V++A    +  A+
Sbjct: 367 TWHSALATANGKLFTFGDGAFGVLGHGNRESVSYPKEVQSLNGL-KTVKVACSIWHTAAI 425

Query: 285 T----------GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 334
                       +  ++++G G    LGHG +   L P  + +      H  +++ G   
Sbjct: 426 VEVMGQTATSMSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFH--KIACGHTF 483

Query: 335 VVALDSSGYV 344
            VAL +SG+V
Sbjct: 484 TVALTTSGHV 493



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 76/165 (46%), Gaps = 4/165 (2%)

Query: 182 GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 241
           G+V+T G        +      +  PR +E+   +   Q+  G+     +T +G V T G
Sbjct: 217 GEVWTEGILPDGTASNETVKTDVLTPRPLESNVVLDVHQIVCGVRHVALVTRQGEVFTWG 276

Query: 242 SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC- 300
               G+LGHG  +D   PK +  L  + ++  +A G  +   V+ +G ++S+G G +   
Sbjct: 277 EEVGGRLGHGIQVDISRPKLVEFL-ALTNIDFVACGEYHTCVVSTSGDLFSWGDGIHNVG 335

Query: 301 -LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            LGHG       P+ + +   +G+ V+ V+ G  H     ++G +
Sbjct: 336 LLGHGSDISHWIPKRV-SGPLEGLQVLSVACGTWHSALATANGKL 379



 Score = 46.2 bits (108), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 81/184 (44%), Gaps = 27/184 (14%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETT-- 149
           + ++   S+ H++ IVE      Q  T       +S+  +F+ G      LGHG + T  
Sbjct: 411 KTVKVACSIWHTAAIVEVMG---QTATS------MSSRKLFTWGDGDKNRLGHGNKETYL 461

Query: 150 --QCVS-FTRINFPSAA--HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPI 204
              CVS     NF   A  H   V+        +  SG VFT G  +    G+  ++  +
Sbjct: 462 LPTCVSSLIDYNFHKIACGHTFTVA--------LTTSGHVFTMGGTAHGQLGNSISDGKL 513

Query: 205 FRPRLV-EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
             P LV + L G   +++  G +    LT R  V T G   +G+LGHGDT D+ TP  + 
Sbjct: 514 --PCLVQDRLVGEFVEEIACGAHHVAVLTSRSEVFTWGKGANGRLGHGDTEDKRTPTLVE 571

Query: 264 PLEE 267
            L +
Sbjct: 572 ALRD 575


>gi|149730315|ref|XP_001489590.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Equus
           caballus]
          Length = 551

 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 93/218 (42%), Gaps = 4/218 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  +F  G++ CG LG G +    +   R++  +   V  +S  S  H       G+VFT
Sbjct: 64  NDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLTGKKVACLSYGSGPHVVLATSEGEVFT 122

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN  +    +   L      +V  G   +  LT  G V   G N  G
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKRVIEVACGSYHSLVLTSDGEVFAWGYNNSG 182

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T ++P P+ +    +   VV IA G    +AV   G VY +G   N  LG G  
Sbjct: 183 QVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYSGNGQLGLGGS 242

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            +  QP   +    +GI V R + G  H + L   G V
Sbjct: 243 GN--QPTPCRVAALQGIRVQRAACGYAHTLVLTDEGQV 278



 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 91/185 (49%), Gaps = 8/185 (4%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G YH+L L S+  VF+ G +  G +G G    Q +            VV ++  +
Sbjct: 155 IEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQ 214

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             +  V+ +G+V+  G + +   G   + N+P   P  V AL+G+  ++   G   T  L
Sbjct: 215 MCSMAVVDTGEVYVWGYSGNGQLGLGGSGNQPT--PCRVAALQGIRVQRAACGYAHTLVL 272

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS--YMLAVTGNGV 289
           T  G V+  G+N++GQLG G+  ++P P  I  + E   +++IAA  S     A T  G 
Sbjct: 273 TDEGQVYVWGANSYGQLGTGNKSNQPYPTPI--IVEKDRIIEIAACHSTHTSAAKTQGGH 330

Query: 290 VYSFG 294
           VY +G
Sbjct: 331 VYMWG 335



 Score = 38.9 bits (89), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 53/116 (45%), Gaps = 3/116 (2%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE-EVGSVVQIAAGPSYMLAVTGNG 288
           + T+   +   G+N  G LG GD      P+ +  L  +  + +   +GP  +LA T  G
Sbjct: 60  YTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLTGKKVACLSYGSGPHVVLA-TSEG 118

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            V+++G  +   LG+G  +  L P  I T       V+ V+ G  H + L S G V
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKRVIEVACGSYHSLVLTSDGEV 173


>gi|405974201|gb|EKC38864.1| Protein RCC2 [Crassostrea gigas]
          Length = 502

 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 59/250 (23%), Positives = 107/250 (42%), Gaps = 28/250 (11%)

Query: 122 HTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           H+++I+ +    + G + CG LG G    + +  T +      ++V     +NH  F+  
Sbjct: 144 HSVIITADGKAMTFGRNDCGQLGQGDLNRRDLP-TEVPLLQGLNIVDACCGKNHTLFLTD 202

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            G V+ CGDN     G    +  I  P  + + KG P ++V  G  F+    IRG++++ 
Sbjct: 203 KGHVYACGDNKMGQLGLGHQSSTILVPTKI-SYKGPPVRKVAGGGEFSMMADIRGNLYSF 261

Query: 241 GSNTHGQLGHGDT------------------------LDRPTPKSIAPLEEVGSVVQIAA 276
           G   +GQLGH                           +++     I P+ +V  V ++A 
Sbjct: 262 GCPEYGQLGHNTDGKYFVTSNKMSFRCETRPRKVNVFIEKARDGHIVPVTDV-EVRELAC 320

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
           G ++   +     V+++G G    LGH E  DE+ PR ++ F        ++ AG    +
Sbjct: 321 GANHTAIIDSKKRVFTWGFGGYGRLGHAEPKDEMVPRHLKFFDGPNRGATQIHAGSTFTL 380

Query: 337 ALDSSGYVSL 346
           A +  G + +
Sbjct: 381 ATNEYGALYM 390


>gi|297841169|ref|XP_002888466.1| hypothetical protein ARALYDRAFT_475695 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297334307|gb|EFH64725.1| hypothetical protein ARALYDRAFT_475695 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1005

 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 67/232 (28%), Positives = 104/232 (44%), Gaps = 28/232 (12%)

Query: 104 SDIVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA 162
           SD++  S     +  G +HT ++++S  +F+ GS   GVLGHG       S   +  P  
Sbjct: 387 SDVLGGSLSIFSVACGAWHTAMVTSSGQLFTYGSRTFGVLGHG-------SLESVTKPKE 439

Query: 163 AH------VVQVSASENHAAFVLQS------------GQVFTCGDNSSFCCGHRDTNRPI 204
                   V+ VS    H A ++++            G++FT GD      GH D  R +
Sbjct: 440 VESLRRMKVISVSCGPWHTAAIVETAIDRKFYNAKSCGKLFTWGDGDKGRLGHADNKRKL 499

Query: 205 FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
             P  V  L      +V+ G   T  L++ G V+T GS+ HGQLG     D+     +  
Sbjct: 500 V-PTCVTELIDHDFIKVSCGWTLTVALSVSGTVYTMGSSIHGQLGCPRAKDKSINVVLGN 558

Query: 265 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
           L     V  IA+G  ++  +T  G VY++G G+N  LG G+  D   P  ++
Sbjct: 559 LTR-QFVKDIASGSHHVAVLTSFGNVYTWGKGTNGQLGLGDVRDRNSPVLVE 609



 Score = 57.4 bits (137), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 50/179 (27%), Positives = 85/179 (47%), Gaps = 15/179 (8%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  +S    HAA V + G+VF  G+ +S   G +  N  I  P+ VE+L+ V  + V   
Sbjct: 293 VQSISLGAKHAALVTRQGEVFCWGNGNSGKLGLK-VNIDIDHPKRVESLEDVAVRSVACS 351

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-----TPKSIAPLEEVGSVVQIAAGPS 279
            + T  +T  G ++  G +       G T+++      T K    L    S+  +A G  
Sbjct: 352 DHQTCAVTESGELYLWGID-------GGTIEQSGSQFLTRKISDVLGGSLSIFSVACGAW 404

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           +   VT +G ++++GS +   LGHG      +P+ +++ RR  + V+ VS G  H  A+
Sbjct: 405 HTAMVTSSGQLFTYGSRTFGVLGHGSLESVTKPKEVESLRR--MKVISVSCGPWHTAAI 461


>gi|440577319|emb|CCI55326.1| PH01B001I13.22 [Phyllostachys edulis]
          Length = 1426

 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/177 (29%), Positives = 93/177 (52%), Gaps = 7/177 (3%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  ++  ENHAA + + G+VF+ G  SS   GH+  N  +  P++V+ L  V  K V  G
Sbjct: 489 VQSIACGENHAAIITKQGEVFSWGKESSGRLGHK-VNVSLSCPKIVKTLASVHVKVVAFG 547

Query: 225 LNFTGFLTIRGHVHTCG--SNTHGQLGHGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYM 281
              T  +T+ G +   G  +N+ G L      ++  P K   P++ + SV +IA G  +M
Sbjct: 548 SKHTCAVTVSGELFEWGEGANSLGLLNDWYGRNQWVPHKLFGPMDNI-SVSKIACGEWHM 606

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             +T +G ++++G G+   LGHG+     +P+ +++   KG+ +  V+ G  H  A+
Sbjct: 607 AIITSSGQLFTYGDGTFGVLGHGDTQGIARPKEVESL--KGLRMSSVACGPWHTAAI 661



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 67/237 (28%), Positives = 116/237 (48%), Gaps = 20/237 (8%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPS----- 161
           +I  G +H  +I++S  +F+ G    GVLGHG       P+  + +   R++  +     
Sbjct: 598 KIACGEWHMAIITSSGQLFTYGDGTFGVLGHGDTQGIARPKEVESLKGLRMSSVACGPWH 657

Query: 162 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
            A +V+V +S    A    SG++FT G+       H D    +  P  V++L      QV
Sbjct: 658 TAAIVEVMSSFKANA---PSGKLFTWGNADRGKLDHADKKMKLV-PTCVDSLIVYDFIQV 713

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
           + G+  T  LT+ G V T GS+ HGQLG+   +D     ++  L +   V +I++G S++
Sbjct: 714 SCGMALTVVLTVTGVVFTVGSSRHGQLGN-PQVDGEYICTVEGLLKTEFVREISSGSSHV 772

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             +T NG V+++G G+   LG G+  +   P  ++    +G HV  ++ G     A+
Sbjct: 773 AVLTMNGKVFTWGKGAEGQLGLGDYVNRSSPTLVEAL--EGRHVESIACGSSFTAAI 827



 Score = 54.3 bits (129), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 78/171 (45%), Gaps = 5/171 (2%)

Query: 174 HAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           HAA  L S   +F  GD      G  D  + +  PRLV + K +  + +  G N    +T
Sbjct: 446 HAACRLDSLKDIFLWGDVLGSMLGSEDLPKAL--PRLVGSTKMLDVQSIACGENHAAIIT 503

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
            +G V + G  + G+LGH   +    PK +  L  V  V  +A G  +  AVT +G ++ 
Sbjct: 504 KQGEVFSWGKESSGRLGHKVNVSLSCPKIVKTLASV-HVKVVAFGSKHTCAVTVSGELFE 562

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTF-RRKGIHVVRVSAGDEHVVALDSSG 342
           +G G+N      + +   Q    + F     I V +++ G+ H+  + SSG
Sbjct: 563 WGEGANSLGLLNDWYGRNQWVPHKLFGPMDNISVSKIACGEWHMAIITSSG 613



 Score = 54.3 bits (129), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 52/217 (23%), Positives = 90/217 (41%), Gaps = 17/217 (7%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETT-QCVSFTRINFPSAAHVVQVSASEN 173
           I  G  H  +I+    VFS G    G LGH    +  C    +    ++ HV  V+    
Sbjct: 492 IACGENHAAIITKQGEVFSWGKESSGRLGHKVNVSLSCPKIVKT--LASVHVKVVAFGSK 549

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRP-RLVEALKGVPCKQVTAGLNFTGFL 231
           H   V  SG++F  G+ ++      D   R  + P +L   +  +   ++  G      +
Sbjct: 550 HTCAVTVSGELFEWGEGANSLGLLNDWYGRNQWVPHKLFGPMDNISVSKIACGEWHMAII 609

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV------- 284
           T  G + T G  T G LGHGDT     PK +  L+ +  +  +A GP +  A+       
Sbjct: 610 TSSGQLFTYGDGTFGVLGHGDTQGIARPKEVESLKGL-RMSSVACGPWHTAAIVEVMSSF 668

Query: 285 ---TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 318
                +G ++++G+     L H ++  +L P  + + 
Sbjct: 669 KANAPSGKLFTWGNADRGKLDHADKKMKLVPTCVDSL 705


>gi|325180310|emb|CCA14713.1| regulator of chromosome condensation (RCC1)like protein putative
           [Albugo laibachii Nc14]
          Length = 393

 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 61/234 (26%), Positives = 110/234 (47%), Gaps = 16/234 (6%)

Query: 125 LISNSSVFSCGSSLCGVLGHGP-ETTQCVSFTRINFP------SAAHVVQVSASENHAAF 177
           + + S+VF+ G+   G LGHG  E T   S      P         ++ ++     H+A 
Sbjct: 1   MSTQSTVFTWGTGTQGQLGHGSFEKTGIRSSYEELSPRILETFEGKNIAKLDFGATHSAA 60

Query: 178 VLQSGQVFTCGDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
           + + G+++T G N     GH  +N+ I   PR+V+AL+G+    ++ G   TG +   G 
Sbjct: 61  IDKEGKLYTWGSNEYHQLGHGSSNQDIQSIPRVVDALRGIKIVDISCGEYHTGAVDEEGK 120

Query: 237 VHTCGS-----NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNGVV 290
           + T G         G LGH    D   P+ +  L + G  V+ +  G  + +A+T +G +
Sbjct: 121 LFTWGWGGSTMKGSGALGHAGGEDESIPRLVRTLVDQGVPVKSVECGELHTVALTKDGEI 180

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           +++G+G    LG+G   +   P  ++ F  +  ++  +SAG +   A+   G V
Sbjct: 181 WAWGNGEYGRLGNGASDNFEVPEPVEYFADE--NIASISAGRDFTFAITEHGEV 232



 Score = 68.9 bits (167), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 57/226 (25%), Positives = 106/226 (46%), Gaps = 21/226 (9%)

Query: 119 GRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 177
           G  HT+ L  +  +++ G+   G LG+G      V    + + +  ++  +SA  +    
Sbjct: 167 GELHTVALTKDGEIWAWGNGEYGRLGNGASDNFEVP-EPVEYFADENIASISAGRDFTFA 225

Query: 178 VLQSGQVFTCGDNSSFCCG-----HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           + + G+V++ G NS    G       D       P +VEAL  V   QV+AG +    +T
Sbjct: 226 ITEHGEVYSWGINSHSQLGLGGGLTVDYYNMETIPVVVEALSNVNVAQVSAGYDHAAAVT 285

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G +   G+    +           P  +  L++  +++ +  G  Y  A++ +G +++
Sbjct: 286 NDGKMFMWGAKLWLE-----------PHEMTILKDE-TIISVQCGRYYTAALSASGNLFT 333

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           FG G + CLGHGE+  +LQP  +++  R   +VV ++ G  H+ AL
Sbjct: 334 FGKGHSNCLGHGERKTQLQPLLVESLNR--YNVVSMTCGYSHMGAL 377


>gi|260791114|ref|XP_002590585.1| hypothetical protein BRAFLDRAFT_123620 [Branchiostoma floridae]
 gi|229275780|gb|EEN46596.1| hypothetical protein BRAFLDRAFT_123620 [Branchiostoma floridae]
          Length = 710

 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 108/228 (47%), Gaps = 7/228 (3%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  GR HTL+ + +  V+  G    G LG G +TT+C   T ++F S A  + VS    H
Sbjct: 92  VACGRSHTLIATGDGKVYVWGGGSEGQLGLGEDTTECTEPTLLDFDSKA--ISVSCGYYH 149

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
            A V + G ++T G+      G  +++      P+ V  +K    K V  G   T  +  
Sbjct: 150 TAVVTEDGNLYTFGETEYGKLGLNNSDLDSSDTPQKVTGIK-EKVKFVVCGGGHTTAIAE 208

Query: 234 RGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
            G V+T G+   GQLGHG++L + PTP  +    +       + G ++   +TG G +Y+
Sbjct: 209 SGAVYTFGNGASGQLGHGNSLLESPTPHRVERFRDA-DCKHASCGENFTAVITGKGHLYT 267

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           FG G +  LG G++    Q R  +  R     V  V+ G  H++ + S
Sbjct: 268 FGDGRHGKLGLGDESFTNQFRPFKVARFNKFQVQWVACGGCHMMVIAS 315



 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/105 (36%), Positives = 50/105 (47%), Gaps = 1/105 (0%)

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           V  G   T  +T  G ++T GSN  GQLG G T     P  +  L+   + + +A G S+
Sbjct: 40  VACGDEHTALVTENGRLYTFGSNDWGQLGLGHTKTASKPSCVKSLKHEKAKL-VACGRSH 98

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
            L  TG+G VY +G GS   LG GE   E     +  F  K I V
Sbjct: 99  TLIATGDGKVYVWGGGSEGQLGLGEDTTECTEPTLLDFDSKAISV 143



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 53/212 (25%), Positives = 86/212 (40%), Gaps = 21/212 (9%)

Query: 146 PETTQCVSFTRINFPSA---------AHVVQVSASENHAAFVLQSGQVFTCGDNS--SFC 194
           PET    +F +  F              +  V+  + H A V ++G+++T G N      
Sbjct: 9   PETGAIFTFGKSKFAENISSKFWIRNDRICAVACGDEHTALVTENGRLYTFGSNDWGQLG 68

Query: 195 CGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTL 254
            GH  T     +P  V++LK    K V  G + T   T  G V+  G  + GQLG G+  
Sbjct: 69  LGHTKT---ASKPSCVKSLKHEKAKLVACGRSHTLIATGDGKVYVWGGGSEGQLGLGEDT 125

Query: 255 DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS--NFCLGHGEQHDELQP 312
              T  ++  L+     + ++ G  +   VT +G +Y+FG        L + +      P
Sbjct: 126 TECTEPTL--LDFDSKAISVSCGYYHTAVVTEDGNLYTFGETEYGKLGLNNSDLDSSDTP 183

Query: 313 RAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           + +   + K   VV    G  H  A+  SG V
Sbjct: 184 QKVTGIKEKVKFVV---CGGGHTTAIAESGAV 212


>gi|410896622|ref|XP_003961798.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Takifugu
           rubripes]
          Length = 531

 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 68/229 (29%), Positives = 107/229 (46%), Gaps = 8/229 (3%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQC-VSFTRINFPSAAHVVQVS-ASENH 174
           T+      + S+  V++ G +    LG G   +QC +   +++  S   VV +S  S  H
Sbjct: 29  TSANEAIYITSDDEVYAFGLNCSNCLGTGD--SQCTIVPKKVDILSGRKVVSLSYGSGPH 86

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGFLTI 233
                + G++F  G N     G+  TN+ +  P LV A L      +V  G + +  LT 
Sbjct: 87  ILLATEDGELFAWGHNGYSQLGNGTTNQGV-APVLVSATLLNRKVTEVACGSHHSMALTD 145

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V+  G N  GQ+G G T ++PTP+ ++   +    V I  G +  LAV  NG VY +
Sbjct: 146 SGEVYAWGYNNCGQVGSGSTANQPTPRRVSSCLQNRVAVSIVCGQTSSLAVVDNGEVYGW 205

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           G   N  LG G   ++L P  +     +G+ V +V +G  H +AL   G
Sbjct: 206 GYNGNGQLGLGNNGNQLTPCRLVAL--QGLCVQQVVSGYAHSLALTDEG 252



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/183 (27%), Positives = 92/183 (50%), Gaps = 6/183 (3%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           ++  G +H++ +++S  V++ G + CG +G G    Q       +       V +   + 
Sbjct: 132 EVACGSHHSMALTDSGEVYAWGYNNCGQVGSGSTANQPTPRRVSSCLQNRVAVSIVCGQT 191

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
            +  V+ +G+V+  G N +   G  +    +   RLV AL+G+  +QV +G   +  LT 
Sbjct: 192 SSLAVVDNGEVYGWGYNGNGQLGLGNNGNQLTPCRLV-ALQGLCVQQVVSGYAHSLALTD 250

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS--YMLAVTGNGVVY 291
            G ++  G+NT+GQLG G+  ++ +P  I  + E   +V+IAA  S     A T +G VY
Sbjct: 251 EGLLYAWGANTYGQLGTGNKSNQLSPVQI--MTEKERIVEIAACHSTHTSAAKTQSGQVY 308

Query: 292 SFG 294
            +G
Sbjct: 309 MWG 311


>gi|41052709|dbj|BAD07566.1| putative ZR1 protein [Oryza sativa Japonica Group]
 gi|50251941|dbj|BAD27877.1| putative ZR1 protein [Oryza sativa Japonica Group]
          Length = 978

 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 101/212 (47%), Gaps = 8/212 (3%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 189
           +F  G     VL HG  +   VS  R+ N      V  V+  E HAA V + G+VF+ G 
Sbjct: 172 IFVWGEVPGNVLDHGDVSKANVSLPRLLNTTHIIDVQSVACGEKHAAIVTKQGEVFSWGV 231

Query: 190 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
           ++    GH+  +  +  P+++E+L     K +  G   T  ++I G ++  G  TH    
Sbjct: 232 DNGGRLGHK-VSVSVSDPKIIESLASTRVKAIAFGAKHTCAVSISGELYEWGEGTHCLGL 290

Query: 250 HGDTLDRPTP---KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
            GD   R      K   PL+ + S+++IA G  +   ++  G ++++G G+   LGHG+ 
Sbjct: 291 WGDQYQRSQWFPHKLFGPLDGI-SILKIACGHWHTAIISSAGQLFAYGDGTFGVLGHGDT 349

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
               +P+ +++   KG+    ++ G  H  A+
Sbjct: 350 LTVARPKQVESL--KGVRAKAIACGPWHTAAI 379



 Score = 68.2 bits (165), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 63/238 (26%), Positives = 101/238 (42%), Gaps = 33/238 (13%)

Query: 133 SCGSSLCGVLGHGPETTQCV-----SFTRIN-FP-------SAAHVVQVSASENHAAFVL 179
           +C  S+ G L    E T C+      + R   FP           +++++    H A + 
Sbjct: 269 TCAVSISGELYEWGEGTHCLGLWGDQYQRSQWFPHKLFGPLDGISILKIACGHWHTAIIS 328

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR----- 234
            +GQ+F  GD +    GH DT   + RP+ VE+LKGV  K +  G   T  +  R     
Sbjct: 329 SAGQLFAYGDGTFGVLGHGDT-LTVARPKQVESLKGVRAKAIACGPWHTAAIVERMGTVK 387

Query: 235 -----GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
                G + T G    G+LGH D   +  P  + PL +     Q++   +  + +T  GV
Sbjct: 388 SNAPSGKLFTWGDADRGKLGHADKKMKLVPTCVEPLNDF-DFAQVSCAKAQTIVLTITGV 446

Query: 290 VYSFGSGSNFCLGHGEQHDE---LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           V++ GS  +  LG+    D    L    ++T       V  +S+G  H+  L  +G V
Sbjct: 447 VFTIGSKEHGRLGNPLSEDTSICLIEGPLKTE-----FVREISSGSSHIAVLTMNGKV 499



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 56/234 (23%), Positives = 89/234 (38%), Gaps = 66/234 (28%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           ++I  G +HT +IS++  +F+ G    GVLGHG +T       ++          ++   
Sbjct: 315 LKIACGHWHTAIISSAGQLFAYGDGTFGVLGHG-DTLTVARPKQVESLKGVRAKAIACGP 373

Query: 173 NHAAFVLQ----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG-----VP 217
            H A +++          SG++FT GD      GH D    +  P  VE L       V 
Sbjct: 374 WHTAAIVERMGTVKSNAPSGKLFTWGDADRGKLGHADKKMKLV-PTCVEPLNDFDFAQVS 432

Query: 218 C-----------------------------------------------KQVTAGLNFTGF 230
           C                                               +++++G +    
Sbjct: 433 CAKAQTIVLTITGVVFTIGSKEHGRLGNPLSEDTSICLIEGPLKTEFVREISSGSSHIAV 492

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
           LT+ G V T G  T GQLG GD +DR  P  +  LE+   V  IA G ++ +A+
Sbjct: 493 LTMNGKVFTWGKGTEGQLGLGDYVDRSYPTLVEALED-KQVHSIACGFNFTMAI 545



 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/182 (26%), Positives = 84/182 (46%), Gaps = 6/182 (3%)

Query: 167 QVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRP-IFRPRLVEALKGVPCKQVTAG 224
           Q S+   H A+   S   +F  G+       H D ++  +  PRL+     +  + V  G
Sbjct: 154 QKSSEGLHVAYGATSLKDIFVWGEVPGNVLDHGDVSKANVSLPRLLNTTHIIDVQSVACG 213

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
                 +T +G V + G +  G+LGH  ++    PK I  L     V  IA G  +  AV
Sbjct: 214 EKHAAIVTKQGEVFSWGVDNGGRLGHKVSVSVSDPKIIESLAST-RVKAIAFGAKHTCAV 272

Query: 285 TGNGVVYSFGSGSNFCLG-HGEQHDELQPRAIQTF-RRKGIHVVRVSAGDEHVVALDSSG 342
           + +G +Y +G G++ CLG  G+Q+   Q    + F    GI +++++ G  H   + S+G
Sbjct: 273 SISGELYEWGEGTH-CLGLWGDQYQRSQWFPHKLFGPLDGISILKIACGHWHTAIISSAG 331

Query: 343 YV 344
            +
Sbjct: 332 QL 333


>gi|222632434|gb|EEE64566.1| hypothetical protein OsJ_19418 [Oryza sativa Japonica Group]
          Length = 1002

 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 68/235 (28%), Positives = 114/235 (48%), Gaps = 28/235 (11%)

Query: 114 MQITTGRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G +H+ L +S+  +F+ G    G LGHG    + V++ + +   S    ++V+  
Sbjct: 335 LSVACGSWHSALTMSSGKLFTFGDGTFGSLGHGDR--ESVAYPKEVEALSGFRAMKVACG 392

Query: 172 ENHAAFVLQ-SGQ---------VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
             H+A +++ SGQ         +FT GD      GH D    +  P  V+AL      QV
Sbjct: 393 VWHSAAIVEISGQASTNAMSRKLFTWGDGDKNRLGHGDKEAKLV-PTCVQALVDHNFHQV 451

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL---EEVGS--VVQIAA 276
             G + T  L   GHV T GS+ +GQLG+      P      P    +++G+  V +I+ 
Sbjct: 452 ACGHSMTVALATSGHVFTMGSSNNGQLGN------PKADGKQPCMVQDKLGNELVEEISC 505

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
           G +++ A+T    VY++G G+N  LGHG   D+ +P  +   + +  HV  +S G
Sbjct: 506 GSNHVAALTSRSEVYTWGMGANGRLGHGSVEDKKKPTLVDALKDR--HVKSISCG 558



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 72/244 (29%), Positives = 114/244 (46%), Gaps = 21/244 (8%)

Query: 116 ITTGRYHTLLISNSSV---FSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           I  G +HT +++ S     +  GS   G+LGHG   +  +   R++ P     V+ V+  
Sbjct: 282 IACGEFHTCVVTASGDLYDWGDGSYNAGLLGHGTGVSHWLP-KRVSGPLEGLQVLSVACG 340

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL-NFTGF 230
             H+A  + SG++FT GD +    GH D    +  P+ VEAL G    +V  G+ +    
Sbjct: 341 SWHSALTMSSGKLFTFGDGTFGSLGHGD-RESVAYPKEVEALSGFRAMKVACGVWHSAAI 399

Query: 231 LTIRGH---------VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
           + I G          + T G     +LGHGD   +  P  +  L +  +  Q+A G S  
Sbjct: 400 VEISGQASTNAMSRKLFTWGDGDKNRLGHGDKEAKLVPTCVQALVD-HNFHQVACGHSMT 458

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV-RVSAGDEHVVALDS 340
           +A+  +G V++ GS +N  LG+  + D  QP  +Q   + G  +V  +S G  HV AL S
Sbjct: 459 VALATSGHVFTMGSSNNGQLGN-PKADGKQPCMVQD--KLGNELVEEISCGSNHVAALTS 515

Query: 341 SGYV 344
              V
Sbjct: 516 RSEV 519



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 103/243 (42%), Gaps = 17/243 (6%)

Query: 115 QITTGRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI  G  H  L      VF+ G  L G LGHG +T  C     +   + ++V  ++  E 
Sbjct: 229 QIACGSRHIGLTTRQGEVFTWGEELGGRLGHGTDTDICRP-KLVESLAVSNVEYIACGEF 287

Query: 174 HAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           H   V  SG ++  GD S  +   GH          R+   L+G+    V  G   +   
Sbjct: 288 HTCVVTASGDLYDWGDGSYNAGLLGHGTGVSHWLPKRVSGPLEGLQVLSVACGSWHSALT 347

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG---PSYMLAVTGNG 288
              G + T G  T G LGHGD      PK +  L      +++A G    + ++ ++G  
Sbjct: 348 MSSGKLFTFGDGTFGSLGHGDRESVAYPKEVEALSGF-RAMKVACGVWHSAAIVEISGQA 406

Query: 289 -------VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
                   ++++G G    LGHG++  +L P  +Q       H  +V+ G    VAL +S
Sbjct: 407 STNAMSRKLFTWGDGDKNRLGHGDKEAKLVPTCVQALVDHNFH--QVACGHSMTVALATS 464

Query: 342 GYV 344
           G+V
Sbjct: 465 GHV 467



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 60/128 (46%), Gaps = 4/128 (3%)

Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
           +Q+  G    G  T +G V T G    G+LGHG   D   PK +  L  V +V  IA G 
Sbjct: 228 EQIACGSRHIGLTTRQGEVFTWGEELGGRLGHGTDTDICRPKLVESL-AVSNVEYIACGE 286

Query: 279 SYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
            +   VT +G +Y +G GS     LGHG       P+ + +   +G+ V+ V+ G  H  
Sbjct: 287 FHTCVVTASGDLYDWGDGSYNAGLLGHGTGVSHWLPKRV-SGPLEGLQVLSVACGSWHSA 345

Query: 337 ALDSSGYV 344
              SSG +
Sbjct: 346 LTMSSGKL 353


>gi|325181521|emb|CCA15971.1| conserved hypothetical protein [Albugo laibachii Nc14]
          Length = 6906

 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 99/225 (44%), Gaps = 10/225 (4%)

Query: 125  LISNSSVFSCGSSLCG--VLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSG 182
            +     +FSCG +  G   LGH   T +     R +F S   +  ++        +++ G
Sbjct: 3129 MFEECEIFSCGQNNYGELCLGHCNPTNK---LERASFFSYKSIQSIAGGNEVLVVLMKDG 3185

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI--RGHVHTC 240
             VFTCG N S  CG  + +  +  P  + AL G+P   V A       L I   G V++ 
Sbjct: 3186 AVFTCGLNKSGQCGIGNFDERLIVPSPIPALSGIPITMVAASNGCEHMLAISHDGAVYSW 3245

Query: 241  GSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
            G N  GQLG G T+ +  TP+ I  L E   +   A    +   V+ NG + +FG   + 
Sbjct: 3246 GYNDRGQLGLGTTVSKSHTPRVIESLREKYFITFAAVSYHHSAVVSNNGDLLTFGMNDSG 3305

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             LG      +  P+ ++T   +   V RV+ G  H VA+   G V
Sbjct: 3306 QLGLDHTQHQHTPQLVETLSSQ--KVGRVACGLYHTVAIVDDGDV 3348



 Score = 72.0 bits (175), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 69/234 (29%), Positives = 103/234 (44%), Gaps = 10/234 (4%)

Query: 114 MQITTGRYHTLLISNSSV-FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +  + G  H + I+++ + +S G +  G LGH    T+      I       +   + S 
Sbjct: 439 INASNGCEHLIAITDTGLAYSWGYNDRGQLGHENVGTKLYLPKLIESIKEKKMKSAAVSY 498

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHR--DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
           +H+A V  SG+++T G N    CG    D  +    P+LV+AL G     V+ GL     
Sbjct: 499 HHSALVSVSGELYTFGMND---CGQLGLDHTQHQSTPQLVKALLGHHVSMVSCGLYHMVL 555

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            TI G V TCG N HGQLG G       P  +    E+  V  +A G  +  A+T  G+ 
Sbjct: 556 CTISGEVFTCGKNDHGQLGLGHNKQVKVPTQVVLPNEL--VCFVACGYYHATAITSTGLT 613

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           YSFG      LG G +  +  P A+         +V  + G  H + +  SG V
Sbjct: 614 YSFGRNDYGQLGIGSKIHQNIPIALTI--SSNTRMVHAACGCYHTLLMSDSGQV 665



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/220 (28%), Positives = 96/220 (43%), Gaps = 7/220 (3%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
           ++SCG +  G LG G +  +    T +      H+ QV +     A +   G V TCG N
Sbjct: 350 LYSCGQNSYGELGLGDDIERH-QLTSVPLCGWDHIRQVVSGNEILAILTSDGVVLTCGLN 408

Query: 191 SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA--GLNFTGFLTIRGHVHTCGSNTHGQL 248
            S  CGH + +  +   R ++AL+    K + A  G      +T  G  ++ G N  GQL
Sbjct: 409 KSGQCGHGNFDERVMLLRPIQALRSHRVKYINASNGCEHLIAITDTGLAYSWGYNDRGQL 468

Query: 249 GHGDTLDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 307
           GH +   +   PK I  ++E   +   A    +   V+ +G +Y+FG      LG     
Sbjct: 469 GHENVGTKLYLPKLIESIKE-KKMKSAAVSYHHSALVSVSGELYTFGMNDCGQLGLDHTQ 527

Query: 308 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSLC 347
            +  P+ ++     G HV  VS G  H+V    SG V  C
Sbjct: 528 HQSTPQLVKALL--GHHVSMVSCGLYHMVLCTISGEVFTC 565



 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/188 (25%), Positives = 87/188 (46%), Gaps = 7/188 (3%)

Query: 124 LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE--NHAAFVLQS 181
           +L S+  V +CG +  G  GHG    + +    I    +  V  ++AS    H   +  +
Sbjct: 395 ILTSDGVVLTCGLNKSGQCGHGNFDERVMLLRPIQALRSHRVKYINASNGCEHLIAITDT 454

Query: 182 GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 241
           G  ++ G N     GH +    ++ P+L+E++K    K      + +  +++ G ++T G
Sbjct: 455 GLAYSWGYNDRGQLGHENVGTKLYLPKLIESIKEKKMKSAAVSYHHSALVSVSGELYTFG 514

Query: 242 SNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGS--N 298
            N  GQLG   T  + TP+ +  L  +G  V  ++ G  +M+  T +G V++ G      
Sbjct: 515 MNDCGQLGLDHTQHQSTPQLVKAL--LGHHVSMVSCGLYHMVLCTISGEVFTCGKNDHGQ 572

Query: 299 FCLGHGEQ 306
             LGH +Q
Sbjct: 573 LGLGHNKQ 580



 Score = 51.6 bits (122), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 89/201 (44%), Gaps = 11/201 (5%)

Query: 117  TTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA-SENH 174
            + G  H L IS + +V+S G +  G LG G   ++  +   I      + +  +A S +H
Sbjct: 3227 SNGCEHMLAISHDGAVYSWGYNDRGQLGLGTTVSKSHTPRVIESLREKYFITFAAVSYHH 3286

Query: 175  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
            +A V  +G + T G N S   G  D  +    P+LVE L      +V  GL  T  +   
Sbjct: 3287 SAVVSNNGDLLTFGMNDSGQLG-LDHTQHQHTPQLVETLSSQKVGRVACGLYHTVAIVDD 3345

Query: 235  GHVHTCGSNTHGQLGHGDTLDRPTPKSI----AP----LEEVGSVVQIAAGPSYMLAVTG 286
            G V++ G N +GQLG   T +   P  +    AP    L+ V   VQ+  G  + + +  
Sbjct: 3346 GDVYSFGKNEYGQLGLSHTQNTKVPMLVKIPPAPRTPMLDAVNKAVQVYCGYYHTVTILE 3405

Query: 287  NGVVYSFGSGSNFCLGHGEQH 307
             G V ++G      LG G + 
Sbjct: 3406 CGKVVTWGRNDYGQLGIGSKE 3426



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 50/184 (27%), Positives = 84/184 (45%), Gaps = 8/184 (4%)

Query: 124  LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE--NHAAFVLQS 181
            +L+ + +VF+CG +  G  G G    + +  + I   S   +  V+AS    H   +   
Sbjct: 3180 VLMKDGAVFTCGLNKSGQCGIGNFDERLIVPSPIPALSGIPITMVAASNGCEHMLAISHD 3239

Query: 182  GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA-GLNFTGFLTIRGHVHTC 240
            G V++ G N     G   T      PR++E+L+        A   + +  ++  G + T 
Sbjct: 3240 GAVYSWGYNDRGQLGLGTTVSKSHTPRVIESLREKYFITFAAVSYHHSAVVSNNGDLLTF 3299

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N  GQLG   T  + TP+ +  L  ++VG   ++A G  + +A+  +G VYSFG    
Sbjct: 3300 GMNDSGQLGLDHTQHQHTPQLVETLSSQKVG---RVACGLYHTVAIVDDGDVYSFGKNEY 3356

Query: 299  FCLG 302
              LG
Sbjct: 3357 GQLG 3360


>gi|330798916|ref|XP_003287495.1| hypothetical protein DICPUDRAFT_151599 [Dictyostelium purpureum]
 gi|325082514|gb|EGC35994.1| hypothetical protein DICPUDRAFT_151599 [Dictyostelium purpureum]
          Length = 1935

 Score = 76.6 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 64/235 (27%), Positives = 104/235 (44%), Gaps = 15/235 (6%)

Query: 114  MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSF-TRIN-FPSAAHVVQVSA 170
            ++++ G  H  +I++   +++ GS+  G LGHG E  + +S   R++ F   + +  V  
Sbjct: 1125 IKVSCGWDHIAVITDDGELYTWGSNQSGQLGHGLEVNKTLSLPKRVDFFRGKSPIFMVEC 1184

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
               H   V  +  V++ G +     GH        RP+++E L G   + + AG      
Sbjct: 1185 GGEHTIAVDSNYFVYSWGSDKFGQLGHGTKAVNQSRPKVIEELTGQKIQAIAAGFAHNIV 1244

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA--------PLEEVGSVVQIAAGPSYML 282
            L   G + + G    GQLG G    +  P  I            + G + QIA G  + +
Sbjct: 1245 LKKSGELFSFGYGDFGQLGTGSFHSKNIPTRIEINAIMGGLQHHDGGKITQIACGFGHSV 1304

Query: 283  AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
              + NG VYS+G G    LGH    +  +PR I+T R     V ++S G  H VA
Sbjct: 1305 ICSENGEVYSWGLGKQGQLGHKVFENISKPRLIETLR----GVTKISCGHFHTVA 1355



 Score = 68.9 bits (167), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 64/235 (27%), Positives = 105/235 (44%), Gaps = 20/235 (8%)

Query: 116  ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSAS 171
            +  G  HT+ + SN  V+S GS   G LGHG   T+ V+ +R   I   +   +  ++A 
Sbjct: 1182 VECGGEHTIAVDSNYFVYSWGSDKFGQLGHG---TKAVNQSRPKVIEELTGQKIQAIAAG 1238

Query: 172  ENHAAFVLQSGQVFTCG--DNSSFCCGHRDTNRPIFRPRLVEALKGV------PCKQVTA 223
              H   + +SG++F+ G  D      G   +     R  +   + G+         Q+  
Sbjct: 1239 FAHNIVLKKSGELFSFGYGDFGQLGTGSFHSKNIPTRIEINAIMGGLQHHDGGKITQIAC 1298

Query: 224  GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            G   +   +  G V++ G    GQLGH    +   P+ I   E +  V +I+ G  + +A
Sbjct: 1299 GFGHSVICSENGEVYSWGLGKQGQLGHKVFENISKPRLI---ETLRGVTKISCGHFHTVA 1355

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             T    VYS+GSG +  LGH    DE  P+ +  F +K  +V +V  G  H + +
Sbjct: 1356 TTDLKNVYSWGSGEHMKLGHSSDKDESVPKVVDFFIQK--NVSKVVCGQNHTMTI 1408



 Score = 64.3 bits (155), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 55/190 (28%), Positives = 90/190 (47%), Gaps = 13/190 (6%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKG-VPCKQVTA 223
            ++VS   +H A +   G+++T G N S   GH  + N+ +  P+ V+  +G  P   V  
Sbjct: 1125 IKVSCGWDHIAVITDDGELYTWGSNQSGQLGHGLEVNKTLSLPKRVDFFRGKSPIFMVEC 1184

Query: 224  GLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYM 281
            G   T  +     V++ GS+  GQLGHG   +++  PK I  L   G  +Q IAAG ++ 
Sbjct: 1185 GGEHTIAVDSNYFVYSWGSDKFGQLGHGTKAVNQSRPKVIEEL--TGQKIQAIAAGFAHN 1242

Query: 282  LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF-------RRKGIHVVRVSAGDEH 334
            + +  +G ++SFG G    LG G  H +  P  I+            G  + +++ G  H
Sbjct: 1243 IVLKKSGELFSFGYGDFGQLGTGSFHSKNIPTRIEINAIMGGLQHHDGGKITQIACGFGH 1302

Query: 335  VVALDSSGYV 344
             V    +G V
Sbjct: 1303 SVICSENGEV 1312



 Score = 50.4 bits (119), Expect = 0.001,   Method: Composition-based stats.
 Identities = 54/229 (23%), Positives = 92/229 (40%), Gaps = 34/229 (14%)

Query: 115  QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
            QI  G  H+++ S N  V+S G    G LGH  +  + +S  R+   +   V ++S    
Sbjct: 1295 QIACGFGHSVICSENGEVYSWGLGKQGQLGH--KVFENISKPRL-IETLRGVTKISCGHF 1351

Query: 174  HAAFVLQSGQVFTCGDNSSFCCGHR-DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H         V++ G       GH  D +  +  P++V+        +V  G N T  +T
Sbjct: 1352 HTVATTDLKNVYSWGSGEHMKLGHSSDKDESV--PKVVDFFIQKNVSKVVCGQNHTMTIT 1409

Query: 233  I---------------------RGHVHTCGSNTHGQLGHGDTL-----DRPTPKSIAPLE 266
                                     ++  GS  HG+LG G  L     D+P P +I  + 
Sbjct: 1410 FPDDLNNSNQDDEDEENMNGKSSSPIYAWGSAEHGKLGLGGDLKSPFFDKPIPTAIKGVN 1469

Query: 267  EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAI 315
             + +++ I+ G  +   +T N  +Y +G G    +G+G+  D   P  I
Sbjct: 1470 SL-NLIDISCGSDFSAMITSNNAIYVWGCGRFGQIGNGKNDDVWVPTRI 1517



 Score = 47.0 bits (110), Expect = 0.014,   Method: Composition-based stats.
 Identities = 27/85 (31%), Positives = 49/85 (57%), Gaps = 3/85 (3%)

Query: 262  IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ-PRAIQTFR 319
            +APL+     ++++ G  ++  +T +G +Y++GS  +  LGHG E +  L  P+ +  FR
Sbjct: 1115 MAPLKNEKKAIKVSCGWDHIAVITDDGELYTWGSNQSGQLGHGLEVNKTLSLPKRVDFFR 1174

Query: 320  RKGIHVVRVSAGDEHVVALDSSGYV 344
             K   +  V  G EH +A+DS+ +V
Sbjct: 1175 GKS-PIFMVECGGEHTIAVDSNYFV 1198


>gi|282722852|gb|ADA84472.1| retinitis pigmentosa GTPase regulator protein 2 ORF15 [Danio rerio]
          Length = 1413

 Score = 76.6 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 54/180 (30%), Positives = 88/180 (48%), Gaps = 7/180 (3%)

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
           +++S  + H A V ++G++F  G N+    G   T   + +P  V+AL+    K    G 
Sbjct: 39  LRISCGDEHTALVTENGKLFMFGSNNWGQLG-LGTKTTVNKPTCVKALRSERVKLTACGR 97

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
             T   T RG+++ CG N  GQLG GD  DR +   +    + G +  +AAG +   A+T
Sbjct: 98  THTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQGPIKMLAAGSNTSAALT 157

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH--VVALDSSGY 343
            +G +Y  G  S   +G G++ + L P+ +   +R    V  VS G  H   V +D + Y
Sbjct: 158 QDGRLYMRGDNSEGQIGLGKESNALTPQEVSVGKR----VFWVSCGYYHSAFVTVDGALY 213



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 68/230 (29%), Positives = 114/230 (49%), Gaps = 16/230 (6%)

Query: 119 GRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAA 176
           GR HTL+  S  ++++CG +  G LG G +     SF  + F +    ++ ++A  N +A
Sbjct: 96  GRTHTLVFTSRGNLYACGGNNEGQLGLG-DCNDRTSFHLVEFFNKQGPIKMLAAGSNTSA 154

Query: 177 FVLQSGQVFTCGDNSSFCCG-HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 235
            + Q G+++  GDNS    G  +++N     P+ V   K V    V+ G   + F+T+ G
Sbjct: 155 ALTQDGRLYMRGDNSEGQIGLGKESN--ALTPQEVSVGKRV--FWVSCGYYHSAFVTVDG 210

Query: 236 HVHTCGSNTHGQLGHG--DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            ++T G    G+LG       +   P+ +  + +   VVQ+A G  + +A+T N  VYSF
Sbjct: 211 ALYTFGEKDSGKLGLSTEKLANHKVPQQVTDIPD--RVVQVACGGGHTVALTENE-VYSF 267

Query: 294 GSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           G G    LGHG    E + PR ++ FR+    V   + G+ H   +  +G
Sbjct: 268 GLGQFGQLGHGTFIFESRLPRVVEHFRKG--RVKHAACGENHTALITDNG 315



 Score = 67.8 bits (164), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 70/235 (29%), Positives = 107/235 (45%), Gaps = 24/235 (10%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETT----QCVSFTRINFPSAAHVVQV 168
           ++I+ G  HT L++ N  +F  GS+  G LG G +TT     CV   R     +  V   
Sbjct: 39  LRISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALR-----SERVKLT 93

Query: 169 SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEAL-KGVPCKQVTAGLN 226
           +    H       G ++ CG N+    G  D N R  F   LVE   K  P K + AG N
Sbjct: 94  ACGRTHTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSF--HLVEFFNKQGPIKMLAAGSN 151

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLAVT 285
            +  LT  G ++  G N+ GQ+G G   +  TP+ ++    VG  V  ++ G  +   VT
Sbjct: 152 TSAALTQDGRLYMRGDNSEGQIGLGKESNALTPQEVS----VGKRVFWVSCGYYHSAFVT 207

Query: 286 GNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            +G +Y+FG   +  LG   +   +   P+ +     +   VV+V+ G  H VAL
Sbjct: 208 VDGALYTFGEKDSGKLGLSTEKLANHKVPQQVTDIPDR---VVQVACGGGHTVAL 259



 Score = 57.4 bits (137), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 58/217 (26%), Positives = 96/217 (44%), Gaps = 10/217 (4%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L  +  ++  G +  G +G G E+    + T         V  VS    H+AFV   G +
Sbjct: 156 LTQDGRLYMRGDNSEGQIGLGKESN---ALTPQEVSVGKRVFWVSCGYYHSAFVTVDGAL 212

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK--QVTAGLNFTGFLTIRGHVHTCGS 242
           +T G+  S   G   +   +   ++ + +  +P +  QV  G   T  LT    V++ G 
Sbjct: 213 YTFGEKDSGKLGL--STEKLANHKVPQQVTDIPDRVVQVACGGGHTVALT-ENEVYSFGL 269

Query: 243 NTHGQLGHGD-TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 301
              GQLGHG    +   P+ +    + G V   A G ++   +T NG++Y+FG G +  L
Sbjct: 270 GQFGQLGHGTFIFESRLPRVVEHFRK-GRVKHAACGENHTALITDNGLLYTFGDGRHGKL 328

Query: 302 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           G GE++   Q +     R    HV  V+ G  H++ L
Sbjct: 329 GLGEENFTNQFKPTLCPRFLDYHVHSVTCGGCHMLVL 365



 Score = 38.5 bits (88), Expect = 5.0,   Method: Composition-based stats.
 Identities = 26/103 (25%), Positives = 44/103 (42%), Gaps = 5/103 (4%)

Query: 114 MQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           +Q+  G  HT+ ++ + V+S G    G LGHG    +      +       V   +  EN
Sbjct: 247 VQVACGGGHTVALTENEVYSFGLGQFGQLGHGTFIFESRLPRVVEHFRKGRVKHAACGEN 306

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTN-----RPIFRPRLVE 211
           H A +  +G ++T GD      G  + N     +P   PR ++
Sbjct: 307 HTALITDNGLLYTFGDGRHGKLGLGEENFTNQFKPTLCPRFLD 349


>gi|222623461|gb|EEE57593.1| hypothetical protein OsJ_07959 [Oryza sativa Japonica Group]
          Length = 976

 Score = 76.6 bits (187), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 101/212 (47%), Gaps = 8/212 (3%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 189
           +F  G     VL HG  +   VS  R+ N      V  V+  E HAA V + G+VF+ G 
Sbjct: 170 IFVWGEVPGNVLDHGDVSKANVSLPRLLNTTHIIDVQSVACGEKHAAIVTKQGEVFSWGV 229

Query: 190 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
           ++    GH+  +  +  P+++E+L     K +  G   T  ++I G ++  G  TH    
Sbjct: 230 DNGGRLGHK-VSVSVSDPKIIESLASTRVKAIAFGAKHTCAVSISGELYEWGEGTHCLGL 288

Query: 250 HGDTLDRPTP---KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
            GD   R      K   PL+ + S+++IA G  +   ++  G ++++G G+   LGHG+ 
Sbjct: 289 WGDQYQRSQWFPHKLFGPLDGI-SILKIACGHWHTAIISSAGQLFAYGDGTFGVLGHGDT 347

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
               +P+ +++   KG+    ++ G  H  A+
Sbjct: 348 LTVARPKQVESL--KGVRAKAIACGPWHTAAI 377



 Score = 68.2 bits (165), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 63/238 (26%), Positives = 101/238 (42%), Gaps = 33/238 (13%)

Query: 133 SCGSSLCGVLGHGPETTQCV-----SFTRIN-FP-------SAAHVVQVSASENHAAFVL 179
           +C  S+ G L    E T C+      + R   FP           +++++    H A + 
Sbjct: 267 TCAVSISGELYEWGEGTHCLGLWGDQYQRSQWFPHKLFGPLDGISILKIACGHWHTAIIS 326

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR----- 234
            +GQ+F  GD +    GH DT   + RP+ VE+LKGV  K +  G   T  +  R     
Sbjct: 327 SAGQLFAYGDGTFGVLGHGDT-LTVARPKQVESLKGVRAKAIACGPWHTAAIVERMGTVK 385

Query: 235 -----GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
                G + T G    G+LGH D   +  P  + PL +     Q++   +  + +T  GV
Sbjct: 386 SNAPSGKLFTWGDADRGKLGHADKKMKLVPTCVEPLNDF-DFAQVSCAKAQTIVLTITGV 444

Query: 290 VYSFGSGSNFCLGHGEQHDE---LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           V++ GS  +  LG+    D    L    ++T       V  +S+G  H+  L  +G V
Sbjct: 445 VFTIGSKEHGRLGNPLSEDTSICLIEGPLKTE-----FVREISSGSSHIAVLTMNGKV 497



 Score = 57.8 bits (138), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 58/250 (23%), Positives = 100/250 (40%), Gaps = 33/250 (13%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGH-------GPETTQCVSFTRINFPSAAHVVQ 167
           +  G  H  +++    VFS G    G LGH        P+  + ++ TR+          
Sbjct: 208 VACGEKHAAIVTKQGEVFSWGVDNGGRLGHKVSVSVSDPKIIESLASTRVK--------A 259

Query: 168 VSASENHAAFVLQSGQVFTCGDNSSFC---CGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           ++    H   V  SG+++  G+ +  C    G +      F  +L   L G+   ++  G
Sbjct: 260 IAFGAKHTCAVSISGELYEWGEGT-HCLGLWGDQYQRSQWFPHKLFGPLDGISILKIACG 318

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
              T  ++  G +   G  T G LGHGDTL    PK +  L+ V +   IA GP +  A+
Sbjct: 319 HWHTAIISSAGQLFAYGDGTFGVLGHGDTLTVARPKQVESLKGVRAKA-IACGPWHTAAI 377

Query: 285 TG----------NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 334
                       +G ++++G      LGH ++  +L P  ++          +VS     
Sbjct: 378 VERMGTVKSNAPSGKLFTWGDADRGKLGHADKKMKLVPTCVEPL--NDFDFAQVSCAKAQ 435

Query: 335 VVALDSSGYV 344
            + L  +G V
Sbjct: 436 TIVLTITGVV 445



 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 56/234 (23%), Positives = 89/234 (38%), Gaps = 66/234 (28%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           ++I  G +HT +IS++  +F+ G    GVLGHG +T       ++          ++   
Sbjct: 313 LKIACGHWHTAIISSAGQLFAYGDGTFGVLGHG-DTLTVARPKQVESLKGVRAKAIACGP 371

Query: 173 NHAAFVLQ----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG-----VP 217
            H A +++          SG++FT GD      GH D    +  P  VE L       V 
Sbjct: 372 WHTAAIVERMGTVKSNAPSGKLFTWGDADRGKLGHADKKMKLV-PTCVEPLNDFDFAQVS 430

Query: 218 C-----------------------------------------------KQVTAGLNFTGF 230
           C                                               +++++G +    
Sbjct: 431 CAKAQTIVLTITGVVFTIGSKEHGRLGNPLSEDTSICLIEGPLKTEFVREISSGSSHIAV 490

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
           LT+ G V T G  T GQLG GD +DR  P  +  LE+   V  IA G ++ +A+
Sbjct: 491 LTMNGKVFTWGKGTEGQLGLGDYVDRSYPTLVEALED-KQVHSIACGFNFTMAI 543



 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/182 (26%), Positives = 84/182 (46%), Gaps = 6/182 (3%)

Query: 167 QVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRP-IFRPRLVEALKGVPCKQVTAG 224
           Q S+   H A+   S   +F  G+       H D ++  +  PRL+     +  + V  G
Sbjct: 152 QKSSEGLHVAYGATSLKDIFVWGEVPGNVLDHGDVSKANVSLPRLLNTTHIIDVQSVACG 211

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
                 +T +G V + G +  G+LGH  ++    PK I  L     V  IA G  +  AV
Sbjct: 212 EKHAAIVTKQGEVFSWGVDNGGRLGHKVSVSVSDPKIIESLAST-RVKAIAFGAKHTCAV 270

Query: 285 TGNGVVYSFGSGSNFCLG-HGEQHDELQPRAIQTF-RRKGIHVVRVSAGDEHVVALDSSG 342
           + +G +Y +G G++ CLG  G+Q+   Q    + F    GI +++++ G  H   + S+G
Sbjct: 271 SISGELYEWGEGTH-CLGLWGDQYQRSQWFPHKLFGPLDGISILKIACGHWHTAIISSAG 329

Query: 343 YV 344
            +
Sbjct: 330 QL 331


>gi|218197208|gb|EEC79635.1| hypothetical protein OsI_20852 [Oryza sativa Indica Group]
          Length = 1038

 Score = 76.6 bits (187), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 68/232 (29%), Positives = 115/232 (49%), Gaps = 22/232 (9%)

Query: 114 MQITTGRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G +H+ L +S+  +F+ G    G LGHG    + V++ + +   S    ++V+  
Sbjct: 371 LSVACGSWHSALTMSSGKLFTFGDGTFGSLGHGDR--ESVAYPKEVEALSGFRAMKVACG 428

Query: 172 ENHAAFVLQ-SGQ---------VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
             H+A +++ SGQ         +FT GD      GH D    +  P  V+AL      QV
Sbjct: 429 VWHSAAIVEISGQASTNAMSRKLFTWGDGDKNRLGHGDKEAKLV-PTCVQALVDHNFHQV 487

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS--VVQIAAGPS 279
             G + T  L   GHV T GS+ +GQLG+    D   P  +   +++G+  V +I+ G +
Sbjct: 488 ACGHSMTVALATSGHVFTMGSSNNGQLGNPKA-DGKQPCMVQ--DKLGNELVEEISCGSN 544

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
           ++ A+T    VY++G G+N  LGHG   D+ +P  +   + +  HV  +S G
Sbjct: 545 HVAALTSRSEVYTWGMGANGRLGHGSVEDKKKPTLVDALKDR--HVKSISCG 594



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 103/243 (42%), Gaps = 17/243 (6%)

Query: 115 QITTGRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI  G  H  L      VF+ G  L G LGHG +T  C     +   + ++V  ++  E 
Sbjct: 265 QIACGSRHIGLTTRQGEVFTWGEELGGRLGHGTDTDICRP-KLVESLAVSNVEYIACGEF 323

Query: 174 HAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           H   V  SG ++  GD S  +   GH          R+   L+G+    V  G   +   
Sbjct: 324 HTCVVTASGDLYDWGDGSYNAGLLGHGTGVSHWLPKRVSGPLEGLQVLSVACGSWHSALT 383

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG---PSYMLAVTGNG 288
              G + T G  T G LGHGD      PK +  L      +++A G    + ++ ++G  
Sbjct: 384 MSSGKLFTFGDGTFGSLGHGDRESVAYPKEVEALSGF-RAMKVACGVWHSAAIVEISGQA 442

Query: 289 -------VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
                   ++++G G    LGHG++  +L P  +Q       H  +V+ G    VAL +S
Sbjct: 443 STNAMSRKLFTWGDGDKNRLGHGDKEAKLVPTCVQALVDHNFH--QVACGHSMTVALATS 500

Query: 342 GYV 344
           G+V
Sbjct: 501 GHV 503



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 86/177 (48%), Gaps = 7/177 (3%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++    H     + G+VFT G+      GH  T+  I RP+LVE+L     + +  G
Sbjct: 263 VQQIACGSRHIGLTTRQGEVFTWGEELGGRLGH-GTDTDICRPKLVESLAVSNVEYIACG 321

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
              T  +T  G ++  G  ++  G LGHG  +    PK ++ PLE +  V+ +A G  + 
Sbjct: 322 EFHTCVVTASGDLYDWGDGSYNAGLLGHGTGVSHWLPKRVSGPLEGL-QVLSVACGSWHS 380

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
                +G +++FG G+   LGHG++     P+ ++     G   ++V+ G  H  A+
Sbjct: 381 ALTMSSGKLFTFGDGTFGSLGHGDRESVAYPKEVEAL--SGFRAMKVACGVWHSAAI 435



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/164 (29%), Positives = 74/164 (45%), Gaps = 8/164 (4%)

Query: 183 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
           +V     +S++ C   D       P+ +E+   +  +Q+  G    G  T +G V T G 
Sbjct: 232 EVLPSEGSSNYLCSKTD----FLIPKPLESDVVLDVQQIACGSRHIGLTTRQGEVFTWGE 287

Query: 243 NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC-- 300
              G+LGHG   D   PK +  L  V +V  IA G  +   VT +G +Y +G GS     
Sbjct: 288 ELGGRLGHGTDTDICRPKLVESL-AVSNVEYIACGEFHTCVVTASGDLYDWGDGSYNAGL 346

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           LGHG       P+ + +   +G+ V+ V+ G  H     SSG +
Sbjct: 347 LGHGTGVSHWLPKRV-SGPLEGLQVLSVACGSWHSALTMSSGKL 389


>gi|48475110|gb|AAT44179.1| putative regulator of chromosome condensation protein [Oryza sativa
           Japonica Group]
 gi|52353417|gb|AAU43985.1| putative regulator of chromosome condensation protein [Oryza sativa
           Japonica Group]
          Length = 1064

 Score = 76.6 bits (187), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 68/232 (29%), Positives = 115/232 (49%), Gaps = 22/232 (9%)

Query: 114 MQITTGRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G +H+ L +S+  +F+ G    G LGHG    + V++ + +   S    ++V+  
Sbjct: 385 LSVACGSWHSALTMSSGKLFTFGDGTFGSLGHGDR--ESVAYPKEVEALSGFRAMKVACG 442

Query: 172 ENHAAFVLQ-SGQ---------VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
             H+A +++ SGQ         +FT GD      GH D    +  P  V+AL      QV
Sbjct: 443 VWHSAAIVEISGQASTNAMSRKLFTWGDGDKNRLGHGDKEAKLV-PTCVQALVDHNFHQV 501

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS--VVQIAAGPS 279
             G + T  L   GHV T GS+ +GQLG+    D   P  +   +++G+  V +I+ G +
Sbjct: 502 ACGHSMTVALATSGHVFTMGSSNNGQLGNPKA-DGKQPCMVQ--DKLGNELVEEISCGSN 558

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
           ++ A+T    VY++G G+N  LGHG   D+ +P  +   + +  HV  +S G
Sbjct: 559 HVAALTSRSEVYTWGMGANGRLGHGSVEDKKKPTLVDALKDR--HVKSISCG 608



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 103/243 (42%), Gaps = 17/243 (6%)

Query: 115 QITTGRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI  G  H  L      VF+ G  L G LGHG +T  C     +   + ++V  ++  E 
Sbjct: 279 QIACGSRHIGLTTRQGEVFTWGEELGGRLGHGTDTDICRP-KLVESLAVSNVEYIACGEF 337

Query: 174 HAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           H   V  SG ++  GD S  +   GH          R+   L+G+    V  G   +   
Sbjct: 338 HTCVVTASGDLYDWGDGSYNAGLLGHGTGVSHWLPKRVSGPLEGLQVLSVACGSWHSALT 397

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG---PSYMLAVTGNG 288
              G + T G  T G LGHGD      PK +  L      +++A G    + ++ ++G  
Sbjct: 398 MSSGKLFTFGDGTFGSLGHGDRESVAYPKEVEALSGF-RAMKVACGVWHSAAIVEISGQA 456

Query: 289 -------VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
                   ++++G G    LGHG++  +L P  +Q       H  +V+ G    VAL +S
Sbjct: 457 STNAMSRKLFTWGDGDKNRLGHGDKEAKLVPTCVQALVDHNFH--QVACGHSMTVALATS 514

Query: 342 GYV 344
           G+V
Sbjct: 515 GHV 517



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 86/177 (48%), Gaps = 7/177 (3%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++    H     + G+VFT G+      GH  T+  I RP+LVE+L     + +  G
Sbjct: 277 VQQIACGSRHIGLTTRQGEVFTWGEELGGRLGH-GTDTDICRPKLVESLAVSNVEYIACG 335

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
              T  +T  G ++  G  ++  G LGHG  +    PK ++ PLE +  V+ +A G  + 
Sbjct: 336 EFHTCVVTASGDLYDWGDGSYNAGLLGHGTGVSHWLPKRVSGPLEGL-QVLSVACGSWHS 394

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
                +G +++FG G+   LGHG++     P+ ++     G   ++V+ G  H  A+
Sbjct: 395 ALTMSSGKLFTFGDGTFGSLGHGDRESVAYPKEVEAL--SGFRAMKVACGVWHSAAI 449



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/164 (29%), Positives = 74/164 (45%), Gaps = 8/164 (4%)

Query: 183 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
           +V     +S++ C   D       P+ +E+   +  +Q+  G    G  T +G V T G 
Sbjct: 246 EVLPSEGSSNYLCSKTD----FLIPKPLESDVVLDVQQIACGSRHIGLTTRQGEVFTWGE 301

Query: 243 NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC-- 300
              G+LGHG   D   PK +  L  V +V  IA G  +   VT +G +Y +G GS     
Sbjct: 302 ELGGRLGHGTDTDICRPKLVESL-AVSNVEYIACGEFHTCVVTASGDLYDWGDGSYNAGL 360

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           LGHG       P+ + +   +G+ V+ V+ G  H     SSG +
Sbjct: 361 LGHGTGVSHWLPKRV-SGPLEGLQVLSVACGSWHSALTMSSGKL 403


>gi|297598384|ref|NP_001045490.2| Os01g0964800 [Oryza sativa Japonica Group]
 gi|255674106|dbj|BAF07404.2| Os01g0964800, partial [Oryza sativa Japonica Group]
          Length = 496

 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 68/245 (27%), Positives = 112/245 (45%), Gaps = 24/245 (9%)

Query: 116 ITTGRYHTLLISN-SSVFSCGSSLCGVLGHGP-ETTQCVSFTRINFPSAAHVVQVSASEN 173
           ++ G +HT LI+    +F+ G    GVLGHG  E+  C     +   S    + V+    
Sbjct: 189 VSCGTWHTALITTMGQLFTFGDGTFGVLGHGNRESISCPK--EVESLSGLKTISVACGVW 246

Query: 174 HAAFVLQ-----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           H A +++           SG++FT GD      GH D   P  +P  V +L      ++ 
Sbjct: 247 HTAAIVEVIVTQSSSSISSGKLFTWGDGDKHRLGHGD-KEPRLKPTCVASLIDYDFHRIA 305

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV--GSVVQIAAGPSY 280
            G + T  LT  G V + G+  +GQLG+     R   K    +EE+   +VVQ+A G  +
Sbjct: 306 CGHSLTVGLTTSGKVLSMGNTVYGQLGN----PRSDGKIPCLVEEIVGENVVQVACGSYH 361

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           +  +T    V+++G G+N  LGHG+  D   P  ++  R + +    ++ G     A+  
Sbjct: 362 VAVLTIKSEVFTWGKGANGRLGHGDIEDRKIPTLVEALRDRSVR--HIACGANFTAAICQ 419

Query: 341 SGYVS 345
             +VS
Sbjct: 420 HKWVS 424



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 54/174 (31%), Positives = 83/174 (47%), Gaps = 5/174 (2%)

Query: 167 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
            V     H+A V ++G+VFT G+ S    GH      I  PRL+E+L       V  G  
Sbjct: 81  HVDCGVKHSALVTKNGEVFTWGEESGGRLGHGSREDSI-HPRLIESLAVCNVDIVACGEF 139

Query: 227 FTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
            T  +T  G ++T G  TH  G LGHG  +    PK IA   E  +V  ++ G  +   +
Sbjct: 140 HTCAVTTAGELYTWGDGTHNVGLLGHGKDVSHWIPKRIAGALEGLAVAYVSCGTWHTALI 199

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           T  G +++FG G+   LGHG +     P+ +++    G+  + V+ G  H  A+
Sbjct: 200 TTMGQLFTFGDGTFGVLGHGNRESISCPKEVESL--SGLKTISVACGVWHTAAI 251


>gi|296083663|emb|CBI23652.3| unnamed protein product [Vitis vinifera]
          Length = 1062

 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/175 (32%), Positives = 85/175 (48%), Gaps = 7/175 (4%)

Query: 167 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
           +++    H A V + G+VFT G+ S    GH   N    RP LVE L       V  G  
Sbjct: 268 EIACGVRHVALVTRQGEVFTWGEESGGRLGHGIDND-FSRPHLVEFLAVNNVDFVACGEY 326

Query: 227 FTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLA 283
            T  ++  G + T G  TH  G LGHG  +    PK ++ PLE +  V+ +A G  +   
Sbjct: 327 HTCAVSTSGDLFTWGDGTHNAGLLGHGTEVSHWIPKRVSGPLEGL-QVLSVACGTWHSAL 385

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            T NG +++FG G+   LGHG++     PR +Q     G+  ++V+ G  H  A+
Sbjct: 386 ATSNGKLFTFGDGTFGVLGHGDRESVPYPREVQIL--SGLKTIKVACGVWHTAAI 438



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 18/226 (7%)

Query: 114 MQITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G +H+ L  SN  +F+ G    GVLGHG    + V + R +   S    ++V+  
Sbjct: 374 LSVACGTWHSALATSNGKLFTFGDGTFGVLGHGDR--ESVPYPREVQILSGLKTIKVACG 431

Query: 172 ENHAAFVL----QSG------QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
             H A ++    QSG      ++FT GD      GH  +      P  V AL      Q+
Sbjct: 432 VWHTAAIIEVMSQSGTNISSRKLFTWGDGDKHRLGH-GSKETYLLPTCVSALIDYNFHQL 490

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSY 280
             G   T  LT  GHV T G   +GQLG  + L       +   + VG  V+ I+ G  +
Sbjct: 491 ACGHTMTVALTTSGHVFTMGGTAYGQLG--NPLSDGRLPCLVQDKLVGEFVEEISCGAYH 548

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
           +  +T    V+++G G+N  LGHG+  D   P  ++  + + +  +
Sbjct: 549 VAVLTSRSEVFTWGRGANGRLGHGDTEDRRSPTFVEALKDRNVKSI 594



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 50/170 (29%), Positives = 77/170 (45%), Gaps = 25/170 (14%)

Query: 126 ISNSSVFSCGSSLCGVLGHGPETT----QCVS-FTRINFPSAA--HVVQVSASENHAAFV 178
           IS+  +F+ G      LGHG + T     CVS     NF   A  H + V+        +
Sbjct: 449 ISSRKLFTWGDGDKHRLGHGSKETYLLPTCVSALIDYNFHQLACGHTMTVA--------L 500

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV----EALKGVPCKQVTAGLNFTGFLTIR 234
             SG VFT G  +    G+     P+   RL     + L G   ++++ G      LT R
Sbjct: 501 TTSGHVFTMGGTAYGQLGN-----PLSDGRLPCLVQDKLVGEFVEEISCGAYHVAVLTSR 555

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             V T G   +G+LGHGDT DR +P  +  L++  +V  I+ G ++  ++
Sbjct: 556 SEVFTWGRGANGRLGHGDTEDRRSPTFVEALKDR-NVKSISCGSNFTASI 604


>gi|114598774|ref|XP_001175007.1| PREDICTED: E3 ISG15--protein ligase HERC5-like, partial [Pan
           troglodytes]
          Length = 207

 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 80/148 (54%), Gaps = 1/148 (0%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           ++Q++  + H+  + + G++F  G N     G          P++VE L GVP  Q++AG
Sbjct: 44  IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAG 103

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
              +  L++ G++++ G N  GQLG G T  +  P  I  L+    V  +A G S+   +
Sbjct: 104 EAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDYPSLIEGLDNQ-KVEFVACGGSHSALL 162

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQP 312
           T +G++++FG+G +  LGH    +EL+P
Sbjct: 163 TQDGLLFTFGAGKHGQLGHNSTQNELRP 190



 Score = 71.6 bits (174), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 53/167 (31%), Positives = 80/167 (47%), Gaps = 7/167 (4%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QIT G YH+L +S    +F+ G +L G LG G +     +   +   +   + Q+SA E
Sbjct: 45  IQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGE 104

Query: 173 NHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            H+  +  SG +++ G N       GH ++      P L+E L     + V  G + +  
Sbjct: 105 AHSMALSMSGNIYSWGKNEFGQLGLGHTESKD---YPSLIEGLDNQKVEFVACGGSHSAL 161

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG 277
           LT  G + T G+  HGQLGH  T +   P  +A L E   V QIA G
Sbjct: 162 LTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVEY-RVTQIACG 207



 Score = 43.9 bits (102), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 63/145 (43%), Gaps = 4/145 (2%)

Query: 201 NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTP 259
           N  +   R    L+     Q+T G   +  L+  G +   G N HGQLG G       TP
Sbjct: 27  NYSMKHLRFESILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTP 86

Query: 260 KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
           + +  L  V  + QI+AG ++ +A++ +G +YS+G      LG G    +  P  I+   
Sbjct: 87  QIVEHLAGV-PLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDYPSLIEGLD 145

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYV 344
            + +    V+ G  H   L   G +
Sbjct: 146 NQKVEF--VACGGSHSALLTQDGLL 168


>gi|417407323|gb|JAA50277.1| Putative rcc1 and btb domain-containing protein 2, partial
           [Desmodus rotundus]
          Length = 511

 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 93/218 (42%), Gaps = 4/218 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  +F  G++ CG LG G +    +   R++  S   +  +S  S  H       G+VFT
Sbjct: 50  NDEIFVLGTNCCGCLGLG-DIQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFT 108

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN       +   L      +V  G   +  LT  G V   G N  G
Sbjct: 109 WGHNAYNQLGNGTTNHGSVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGCNNSG 168

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T ++P P+ +    +   VV IA G    +AV  +G VY +G   N  LG G  
Sbjct: 169 QVGSGSTANQPIPRRVTGCLQNRVVVNIACGQMCSMAVVDSGEVYVWGYNGNGQLGLGSS 228

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            +   P  I     +GI V RV+ G  H + L   G V
Sbjct: 229 GNHSTPCRIAAL--QGIRVQRVACGYAHTLVLTDDGQV 264



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 52/184 (28%), Positives = 88/184 (47%), Gaps = 6/184 (3%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G YH+L L S+  VF+ G +  G +G G    Q +            VV ++  +
Sbjct: 141 IEVACGSYHSLVLTSDGEVFAWGCNNSGQVGSGSTANQPIPRRVTGCLQNRVVVNIACGQ 200

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             +  V+ SG+V+  G N +   G   +      P  + AL+G+  ++V  G   T  LT
Sbjct: 201 MCSMAVVDSGEVYVWGYNGNGQLGLGSSGNH-STPCRIAALQGIRVQRVACGYAHTLVLT 259

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS--YMLAVTGNGVV 290
             G V+  G+N++GQLG G+  ++  P  +  + E   +++IAA  S     A T  G V
Sbjct: 260 DDGQVYAWGANSYGQLGTGNKSNQSYPTPV--VVEKDRIIEIAACHSTHTSAAKTQGGHV 317

Query: 291 YSFG 294
           Y +G
Sbjct: 318 YMWG 321



 Score = 38.1 bits (87), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 65/145 (44%), Gaps = 6/145 (4%)

Query: 203 PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 260
           PIF     E L+ +   C   +AG N   ++T+   +   G+N  G LG GD      P+
Sbjct: 18  PIFSLCSEEELQLIRQACVFGSAG-NEVLYMTVNDEIFVLGTNCCGCLGLGDIQSTIEPR 76

Query: 261 SIAPLE-EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
            +  L  +  + +   +GP  +LA T  G V+++G  +   LG+G  +    P  I T  
Sbjct: 77  RLDSLSGKKIACLSYGSGPHIVLATT-EGEVFTWGHNAYNQLGNGTTNHGSVPCHIST-N 134

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYV 344
                V+ V+ G  H + L S G V
Sbjct: 135 LSNKQVIEVACGSYHSLVLTSDGEV 159


>gi|309792077|ref|ZP_07686551.1| regulator of chromosome condensation RCC1 [Oscillochloris
           trichoides DG-6]
 gi|308225884|gb|EFO79638.1| regulator of chromosome condensation RCC1 [Oscillochloris
           trichoides DG6]
          Length = 778

 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 81/261 (31%), Positives = 111/261 (42%), Gaps = 14/261 (5%)

Query: 89  NWKRVLRFLQSVEHSS--DIVETSAGNMQITTGRYHTLLISNSSVFSC-GSSLCGVLGHG 145
           NW   L    + E S+  D+V  S+G   I  G  HT  I+     SC G +    LG G
Sbjct: 287 NWSGQLGDGTTDERSTPVDVVGLSSGVTAIAAGNDHTCAITTGGGVSCWGVNQYSQLGDG 346

Query: 146 PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF 205
             T Q          S A    ++A + H   +   G V   G N S   G   T +   
Sbjct: 347 TTTQQSTPVVVNGLSSRA--AAIAAGDGHTCAMTTGGGVSCWGRNWSGQLGDGTTTQR-R 403

Query: 206 RPRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P  VE L  GV    +TAG + T  L+  G V   G+N  GQLG G T+ R TP  +  
Sbjct: 404 TPMQVEGLSSGV--ADITAGDSHTCALSTEGGVTCWGNNESGQLGDGTTIQRSTPVQVEG 461

Query: 265 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
           L     VV I AG S+  A++  G V  +G   +  LG+G       P  ++        
Sbjct: 462 LSS--GVVAITAGDSHTCALSTEGGVTCWGGNGSGQLGNGTTTQRSTPVQVEGLSSG--- 516

Query: 325 VVRVSAGDEHVVALDSSGYVS 345
           V+ ++AGD H  AL + G V+
Sbjct: 517 VMAITAGDSHTCALTTGGGVT 537



 Score = 68.9 bits (167), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 76/228 (33%), Positives = 100/228 (43%), Gaps = 15/228 (6%)

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           Y   L +NS+V   G++  G LG G  T Q  +   +N  S+  VV ++A   H   +  
Sbjct: 67  YTCALTTNSAVICWGNNEFGQLGDG-TTIQRNTPVAVNGLSSG-VVAIAAGYAHTCALTT 124

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFR--PRLVEAL-KGVPCKQVTAGLNFTGFLTIRGHV 237
           SG V   G+N S   G       I R  P  V  L  GV    + AG   T  LT  G V
Sbjct: 125 SGGVSCWGNNES---GQLGNGITIQRRTPVQVAGLSSGV--AAIAAGEYHTCALTTDGAV 179

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
              GSN +GQLG G T  R TP  +A L     V  I AG S+  A+T  G V  +G   
Sbjct: 180 TCWGSNGYGQLGDGTTTQRSTPVQVAGLSS--GVTAITAGGSHTCALTTGGAVTCWGRNG 237

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVS 345
           N  LG G       P  +     +   V  ++AGD +  AL + G V+
Sbjct: 238 NGQLGDGTTTQRSTPVNVLGLSSE---VAAITAGDVYTCALTTGGGVT 282



 Score = 67.4 bits (163), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 76/238 (31%), Positives = 110/238 (46%), Gaps = 12/238 (5%)

Query: 110 SAGNMQITTGRYHTLLISNSSVFSC-GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV 168
           S+G   IT G  HT  +S     +C G++  G LG G  T Q  +  ++   S+  VV +
Sbjct: 412 SSGVADITAGDSHTCALSTEGGVTCWGNNESGQLGDG-TTIQRSTPVQVEGLSSG-VVAI 469

Query: 169 SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK-GVPCKQVTAGLNF 227
           +A ++H   +   G V   G N S   G+  T +    P  VE L  GV    +TAG + 
Sbjct: 470 TAGDSHTCALSTEGGVTCWGGNGSGQLGNGTTTQR-STPVQVEGLSSGV--MAITAGDSH 526

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           T  LT  G V   G N +GQLG G T  R  P ++  L     V  IAAG S+  A++  
Sbjct: 527 TCALTTGGGVTCWGGNWYGQLGDGTTTQRNMPVNVVGLSS--GVAAIAAGGSHTCALSTE 584

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVS 345
           G V  +G  +   LG G + +   P  ++        V  ++AG  H  AL +SG V+
Sbjct: 585 GGVTCWGWNTYDQLGDGTRTNHNTPVQVEGLSSG---VAAIAAGYAHTCALITSGEVT 639



 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 69/237 (29%), Positives = 100/237 (42%), Gaps = 10/237 (4%)

Query: 110 SAGNMQITTGRYHTLLISNSSVFSC-GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV 168
           S+G + I  G  HT  ++ S   SC G++  G LG+G    +          S   V  +
Sbjct: 106 SSGVVAIAAGYAHTCALTTSGGVSCWGNNESGQLGNGITIQRRTPVQVAGLSSG--VAAI 163

Query: 169 SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
           +A E H   +   G V   G N     G   T +     ++     GV    +TAG + T
Sbjct: 164 AAGEYHTCALTTDGAVTCWGSNGYGQLGDGTTTQRSTPVQVAGLSSGV--TAITAGGSHT 221

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
             LT  G V   G N +GQLG G T  R TP ++  L     V  I AG  Y  A+T  G
Sbjct: 222 CALTTGGAVTCWGRNGNGQLGDGTTTQRSTPVNVLGLSS--EVAAITAGDVYTCALTTGG 279

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVS 345
            V  +G+  +  LG G   +   P  +         V  ++AG++H  A+ + G VS
Sbjct: 280 GVTCWGANWSGQLGDGTTDERSTPVDVVGLSSG---VTAIAAGNDHTCAITTGGGVS 333



 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 61/202 (30%), Positives = 85/202 (42%), Gaps = 18/202 (8%)

Query: 155 TRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG--DNSSFCC------GHRDTNRPIFR 206
           T +N+   A V++ + +       + +G  +TC    NS+  C      G       I R
Sbjct: 37  TNLNYELPATVLEANIASAQHRTPIAAGDAYTCALTTNSAVICWGNNEFGQLGDGTTIQR 96

Query: 207 --PRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
             P  V  L  GV    + AG   T  LT  G V   G+N  GQLG+G T+ R TP  +A
Sbjct: 97  NTPVAVNGLSSGV--VAIAAGYAHTCALTTSGGVSCWGNNESGQLGNGITIQRRTPVQVA 154

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 323
            L     V  IAAG  +  A+T +G V  +GS     LG G       P  +        
Sbjct: 155 GLSS--GVAAIAAGEYHTCALTTDGAVTCWGSNGYGQLGDGTTTQRSTPVQVAGLSSG-- 210

Query: 324 HVVRVSAGDEHVVALDSSGYVS 345
            V  ++AG  H  AL + G V+
Sbjct: 211 -VTAITAGGSHTCALTTGGAVT 231



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 98/239 (41%), Gaps = 14/239 (5%)

Query: 110 SAGNMQITTGRYHTLLISNSSVFSC-GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV 168
           S+G M IT G  HT  ++     +C G +  G LG G  T + +    +   S   V  +
Sbjct: 514 SSGVMAITAGDSHTCALTTGGGVTCWGGNWYGQLGDGTTTQRNMPVNVVGLSSG--VAAI 571

Query: 169 SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR-PRLVEALK-GVPCKQVTAGLN 226
           +A  +H   +   G V   G N+    G  D  R     P  VE L  GV    + AG  
Sbjct: 572 AAGGSHTCALSTEGGVTCWGWNTYDQLG--DGTRTNHNTPVQVEGLSSGV--AAIAAGYA 627

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
            T  L   G V   G N +GQLG G T  R TP  +  L     V  I AG ++  A++ 
Sbjct: 628 HTCALITSGEVTCWGWNWYGQLGDGTTTQRMTPVVVNGLSS--EVAAIVAGYAHTCALST 685

Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVS 345
            G V  +G    + LG+G       P  +         V  ++AGD H   L + G V+
Sbjct: 686 GGGVTCWGWNKYYQLGNGTISQRSIPMDVDGLSSG---VAALAAGDAHTCGLSTGGGVT 741


>gi|403340993|gb|EJY69790.1| hypothetical protein OXYTRI_09469 [Oxytricha trifallax]
          Length = 1074

 Score = 76.6 bits (187), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 63/198 (31%), Positives = 95/198 (47%), Gaps = 19/198 (9%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR-------PRLVEALKGVP 217
           + Q+S  +NH+A +   G ++  G NS    G  D N P  +       P LV+ L+   
Sbjct: 118 IKQISCGDNHSAILTNQGHLYMMGSNSQGQLGIGD-NCPDLQNKDCAGAPCLVDKLRDYK 176

Query: 218 CKQVTAGLNFTGFLTIRGH------VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-S 270
            + V  G NFT F  ++        +   G N  GQLG     +   P  +   E+    
Sbjct: 177 VESVECGSNFT-FSIVKDSNNQEQSIFAWGCNREGQLGLSSLAEIDFPTKLKFFEDYNIR 235

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE-LQPRAIQTFRRKGIHVVRVS 329
           + QI+AG S+ L +T    VY+ GS S+  LG G+Q ++ +QP  I T   K I  +++S
Sbjct: 236 IKQISAGSSHSLFLTEESQVYAVGSNSSGQLGIGQQINQAIQPIIIDTLVDKVI--IQIS 293

Query: 330 AGDEHVVALDSSGYVSLC 347
           AGD H + L S+G V  C
Sbjct: 294 AGDHHSLFLTSTGEVYCC 311



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 66/259 (25%), Positives = 106/259 (40%), Gaps = 59/259 (22%)

Query: 130 SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA--------AHVVQVSASENHAAFVLQS 181
           S+F+ G +  G LG         S   I+FP+           + Q+SA  +H+ F+ + 
Sbjct: 200 SIFAWGCNREGQLG-------LSSLAEIDFPTKLKFFEDYNIRIKQISAGSSHSLFLTEE 252

Query: 182 GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 241
            QV+  G NSS   G         +P +++ L      Q++AG + + FLT  G V+ CG
Sbjct: 253 SQVYAVGSNSSGQLGIGQQINQAIQPIIIDTLVDKVIIQISAGDHHSLFLTSTGEVYCCG 312

Query: 242 SNTHGQLGHGDT-LDRPTPKSIAPLEE----------------------------VGS-- 270
           +N   QLG  D   ++ TP  I  L+                              GS  
Sbjct: 313 NNQLNQLGIMDAQTNQYTPLKITALQNYKIVKIEAKQESAAISNAGELFLWGKGVFGSYR 372

Query: 271 -----------VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
                      V  I+ G S   A+   G+++++G+  +  LG G+Q   + P  + T  
Sbjct: 373 TPQKILTISNPVCDISLGRSLGTALDSKGLLWTWGTNEHGELGVGDQDPRIHPYPVLTL- 431

Query: 320 RKGIHVVRVSAGDEHVVAL 338
            KG  V ++  G + VVAL
Sbjct: 432 -KGKKVTQIMCGGKFVVAL 449



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 56/216 (25%), Positives = 94/216 (43%), Gaps = 44/216 (20%)

Query: 115 QITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI+ G  H+L ++  S V++ GS+  G LG G +  Q +    I+      ++Q+SA ++
Sbjct: 238 QISAGSSHSLFLTEESQVYAVGSNSSGQLGIGQQINQAIQPIIIDTLVDKVIIQISAGDH 297

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG-----VPCKQVTAGLNFT 228
           H+ F+  +G+V+ CG+N     G  D     + P  + AL+      +  KQ +A ++  
Sbjct: 298 HSLFLTSTGEVYCCGNNQLNQLGIMDAQTNQYTPLKITALQNYKIVKIEAKQESAAISNA 357

Query: 229 G------------------FLTI-------------------RGHVHTCGSNTHGQLGHG 251
           G                   LTI                   +G + T G+N HG+LG G
Sbjct: 358 GELFLWGKGVFGSYRTPQKILTISNPVCDISLGRSLGTALDSKGLLWTWGTNEHGELGVG 417

Query: 252 DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           D   R  P  +  L+    V QI  G  +++A+  N
Sbjct: 418 DQDPRIHPYPVLTLKG-KKVTQIMCGGKFVVALGVN 452



 Score = 52.0 bits (123), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 39/132 (29%), Positives = 66/132 (50%), Gaps = 10/132 (7%)

Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
           KQ++AG + + FLT    V+  GSN+ GQLG G  +++     I        ++QI+AG 
Sbjct: 237 KQISAGSSHSLFLTEESQVYAVGSNSSGQLGIGQQINQAIQPIIIDTLVDKVIIQISAGD 296

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLG----HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 334
            + L +T  G VY  G+     LG       Q+  L+  A+Q ++     +V++ A  E 
Sbjct: 297 HHSLFLTSTGEVYCCGNNQLNQLGIMDAQTNQYTPLKITALQNYK-----IVKIEAKQES 351

Query: 335 VVALDSSGYVSL 346
             A+ ++G + L
Sbjct: 352 -AAISNAGELFL 362


>gi|195390339|ref|XP_002053826.1| GJ23132 [Drosophila virilis]
 gi|194151912|gb|EDW67346.1| GJ23132 [Drosophila virilis]
          Length = 835

 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 58/196 (29%), Positives = 94/196 (47%), Gaps = 3/196 (1%)

Query: 153 SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA 212
           S + I  P  A +V V+ SE+H   +   G  +  G+ +    G          P LV++
Sbjct: 441 SMSPIQLPPKAFIVCVAMSESHFVVINDDGSSYAWGEGTHGQLGLTSLETWKHYPGLVQS 500

Query: 213 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
           ++        AG  FT FLT  G++ +CG+N    LG  +  D  TPK IA L +V  + 
Sbjct: 501 VRNYHMVSACAGDGFTVFLTQSGNLLSCGNNIKFALGQDEQKDYFTPKLIAKLADV-RIE 559

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAG 331
           QIAAG  +++A++  G VY +G+  +  LG G  Q  ++ P+ I     K     R+  G
Sbjct: 560 QIAAGLHHVMALSREGAVYVWGTSVSGALGLGNHQQQQMHPQKILLSHVKS-KPSRIYCG 618

Query: 332 DEHVVALDSSGYVSLC 347
            +    L ++G + +C
Sbjct: 619 PDTSAVLFANGELHVC 634



 Score = 43.1 bits (100), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 52/260 (20%), Positives = 108/260 (41%), Gaps = 18/260 (6%)

Query: 90  WKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETT 149
           WK     +QSV +   +V   AG+       +   L  + ++ SCG+++   LG   E  
Sbjct: 491 WKHYPGLVQSVRNY-HMVSACAGD------GFTVFLTQSGNLLSCGNNIKFALGQD-EQK 542

Query: 150 QCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR- 208
              +   I   +   + Q++A  +H   + + G V+  G + S   G  +  +    P+ 
Sbjct: 543 DYFTPKLIAKLADVRIEQIAAGLHHVMALSREGAVYVWGTSVSGALGLGNHQQQQMHPQK 602

Query: 209 -LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLE 266
            L+  +K  P + +  G + +  L   G +H CGSN + +LG     +RP    +   ++
Sbjct: 603 ILLSHVKSKPSR-IYCGPDTSAVLFANGELHVCGSNDYNKLG----FNRPGRITAFKKIQ 657

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
               V++     ++ + +T  G VY+ G       G    +   QP  +   R +  ++V
Sbjct: 658 LPFKVLKACFSSTHSVFLTEGGYVYTMGRNKEGQRGIRHCNAVEQPTLVDAIRAR--YIV 715

Query: 327 RVSAGDEHVVALDSSGYVSL 346
           + +  D+  +       +++
Sbjct: 716 KANCNDQCTIVASEDNIITV 735


>gi|328715082|ref|XP_001946768.2| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Acyrthosiphon
            pisum]
          Length = 4404

 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 58/192 (30%), Positives = 86/192 (44%), Gaps = 16/192 (8%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGDNS------SFCCGHRDTNRPIFRPRLVEALK 214
            +A   +++         V   G+VF CGD+S       FC         +  PR +  L 
Sbjct: 2624 TALKPIEIVGGSKSLFIVSNEGKVFVCGDSSGGRLGIPFC-------GKVSSPRQIPGLS 2676

Query: 215  GVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
                K V   +G      L++ G V + G    G+LGHGD L   TPK I  L     V 
Sbjct: 2677 QFVIKTVAVHSGGKHAMALSLDGKVLSWGDGEDGKLGHGDILTLDTPKLIDSLL-AKRVF 2735

Query: 273  QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
             IA G ++  A+T +G +Y++G G    LGH ++  +  P+ ++ F  K I  V   + D
Sbjct: 2736 YIACGSAHSAAITSDGELYTWGQGQYGRLGHSDEVSQHTPKLVKEFVGKNITQVACGSRD 2795

Query: 333  EHVVALDSSGYV 344
               +ALDS G V
Sbjct: 2796 AQTLALDSEGNV 2807



 Score = 74.7 bits (182), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 109/237 (45%), Gaps = 22/237 (9%)

Query: 114  MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 165
            + I  G +H+  IS    +++ G    G LGHG       P+  Q +    IN+    HV
Sbjct: 3688 IDIACGGFHSAAISRYGHLYTWGKGRYGRLGHGDYEDYLYPKLVQGL----INY----HV 3739

Query: 166  VQVS--ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
            V+V+  + +     V     V++ GD      GH + +     P  +E+L G    Q+  
Sbjct: 3740 VKVACGSGDAQTMCVTSDDNVWSWGDGDYGKLGH-NISESCKLPCKIESLSGKGIIQIDC 3798

Query: 224  GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            G  F+  L+  G ++T G   + +LGHG +     PK ++ L+    +VQ + G  ++LA
Sbjct: 3799 GSQFSVALSANGTLYTWGKGDYFRLGHGSSEHVRKPKPVSGLQG-KKIVQFSTGSLHVLA 3857

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            +T +G VY++G      LG G  H   +PR I     KG  + +VS G  H  A  S
Sbjct: 3858 LTDDGEVYAWGDNDEGQLGDGTAHPIARPRPIAAL--KGKRIQQVSCGSAHSFAWAS 3912



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 104/228 (45%), Gaps = 7/228 (3%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+   L +   V++ G    G LG G   T       +   S   ++ ++    H+A +
Sbjct: 3642 GRHCLALSTTGEVYAWGDGDDGKLGLGNRVTHSKP-QLVQSLSDKCIIDIACGGFHSAAI 3700

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIRGH 236
             + G ++T G       GH D    ++ P+LV+ L      +V   +G   T  +T   +
Sbjct: 3701 SRYGHLYTWGKGRYGRLGHGDYEDYLY-PKLVQGLINYHVVKVACGSGDAQTMCVTSDDN 3759

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G   +G+LGH  +     P  I  L   G ++QI  G  + +A++ NG +Y++G G
Sbjct: 3760 VWSWGDGDYGKLGHNISESCKLPCKIESLSGKG-IIQIDCGSQFSVALSANGTLYTWGKG 3818

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              F LGHG      +P+ +   +  G  +V+ S G  HV+AL   G V
Sbjct: 3819 DYFRLGHGSSEHVRKPKPVSGLQ--GKKIVQFSTGSLHVLALTDDGEV 3864



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 101/229 (44%), Gaps = 9/229 (3%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            G++   L  +  V S G    G LGHG   T   +   I+   A  V  ++    H+A +
Sbjct: 2689 GKHAMALSLDGKVLSWGDGEDGKLGHGDILT-LDTPKLIDSLLAKRVFYIACGSAHSAAI 2747

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI--RGH 236
               G+++T G       GH D       P+LV+   G    QV  G      L +   G+
Sbjct: 2748 TSDGELYTWGQGQYGRLGHSDEVSQ-HTPKLVKEFVGKNITQVACGSRDAQTLALDSEGN 2806

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGS 295
            V++ G    G+LG G +    TP+ +  L  VG  VVQI  G  + +A+T  G V+++G 
Sbjct: 2807 VYSWGDGDFGKLGRGGSDGCCTPQKVERL--VGHRVVQIECGAQFSVALTATGQVWTWGK 2864

Query: 296  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            G  + LG G      +P  +     K + +  ++ G  H +A+ + G V
Sbjct: 2865 GEYYRLGLGRGEHVRRPTLVNQL--KLVTIDHIAVGTLHCIAVSTQGDV 2911



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 76/168 (45%), Gaps = 6/168 (3%)

Query: 167  QVSASENHAAFVLQSGQVFTCGDNSSFCCG---HRDTNRPIFRPRLVEALKGVPCKQVTA 223
            QV   E     V   G+V+  G   S   G   +   N  +  P+LV+ L  +    V +
Sbjct: 3581 QVIGGEQTMFAVTSYGKVYASGYTESGRLGIGPYNPKNPYVVTPQLVQGLNNIIKVAVNS 3640

Query: 224  GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            G      L+  G V+  G    G+LG G+ +    P+ +  L +   ++ IA G  +  A
Sbjct: 3641 GGRHCLALSTTGEVYAWGDGDDGKLGLGNRVTHSKPQLVQSLSD-KCIIDIACGGFHSAA 3699

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
            ++  G +Y++G G    LGHG+  D L P+ +Q       HVV+V+ G
Sbjct: 3700 ISRYGHLYTWGKGRYGRLGHGDYEDYLYPKLVQGLI--NYHVVKVACG 3745



 Score = 58.2 bits (139), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 99/236 (41%), Gaps = 30/236 (12%)

Query: 116  ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASEN 173
            I  G  H+  I S+  +++ G    G LGH  E +Q        F    ++ QV+  S +
Sbjct: 2737 IACGSAHSAAITSDGELYTWGQGQYGRLGHSDEVSQHTPKLVKEF-VGKNITQVACGSRD 2795

Query: 174  HAAFVLQS-GQVFTCGDN---------SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
                 L S G V++ GD          S  CC           P+ VE L G    Q+  
Sbjct: 2796 AQTLALDSEGNVYSWGDGDFGKLGRGGSDGCCT----------PQKVERLVGHRVVQIEC 2845

Query: 224  GLNFTGFLTIRGHVHTCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
            G  F+  LT  G V T G   + +LG   G+ + RPT   +    ++ ++  IA G  + 
Sbjct: 2846 GAQFSVALTATGQVWTWGKGEYYRLGLGRGEHVRRPT---LVNQLKLVTIDHIAVGTLHC 2902

Query: 282  LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +AV+  G VY +G   +   G+G  +   +PR +  F    I + RV  G    +A
Sbjct: 2903 IAVSTQGDVYCWGDNDHGQQGNGTTNANQEPRLVTNFN--NIKINRVGCGSSQSIA 2956



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 64/138 (46%), Gaps = 3/138 (2%)

Query: 206  RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 265
            RP   EAL  +   ++  G      ++  G V  CG ++ G+LG        +P+ I  L
Sbjct: 2616 RPTFNEALTALKPIEIVGGSKSLFIVSNEGKVFVCGDSSGGRLGIPFCGKVSSPRQIPGL 2675

Query: 266  EE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
             + V   V + +G  + +A++ +G V S+G G +  LGHG+      P+ I +   K   
Sbjct: 2676 SQFVIKTVAVHSGGKHAMALSLDGKVLSWGDGEDGKLGHGDILTLDTPKLIDSLLAK--R 2733

Query: 325  VVRVSAGDEHVVALDSSG 342
            V  ++ G  H  A+ S G
Sbjct: 2734 VFYIACGSAHSAAITSDG 2751



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 56/224 (25%), Positives = 96/224 (42%), Gaps = 31/224 (13%)

Query: 131 VFSCGSSLCGVLGHG------PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           V+S G +  G LGHG      P     V+F+++       VV VS  ++  A V + G++
Sbjct: 513 VYSWGVNEFGALGHGQKYSSFPTPEPIVAFSKL------IVVMVSCGKDFCAAVTEDGKL 566

Query: 185 FTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG--LNFTGFLTIRGHVHTC 240
           +  G   +SS CC         + P LV+++      +V+ G  +N T  L+  G+V + 
Sbjct: 567 YMWGKILHSSNCC---------YTPELVKSISEWHVSKVSCGSSINNTLALSREGYVFSF 617

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
                 + G  D      P  I    E+   V I         +     V+++G G+N  
Sbjct: 618 EYRNSDR-GCDDKSLNVIPSMIVFDYEI---VSIYCHNDVNAVIDCANNVFTWGRGNNNM 673

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           LGH       +P+ ++     G  V  +S  D++++AL  +G V
Sbjct: 674 LGHNNSFRVNRPKEVKFL--SGKQVTSLSLADDYILALTDTGQV 715



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 62/140 (44%), Gaps = 18/140 (12%)

Query: 211 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVG 269
           + +  VP K V         +T +G V++ G N  G LGHG      PTP+ I    ++ 
Sbjct: 487 KQMMNVPMKSVDVYDETYLAVTQKGEVYSWGVNEFGALGHGQKYSSFPTPEPIVAFSKL- 545

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGS---GSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
            VV ++ G  +  AVT +G +Y +G     SN C           P  +++      HV 
Sbjct: 546 IVVMVSCGKDFCAAVTEDGKLYMWGKILHSSNCC---------YTPELVKSISE--WHVS 594

Query: 327 RVSAGD--EHVVALDSSGYV 344
           +VS G    + +AL   GYV
Sbjct: 595 KVSCGSSINNTLALSREGYV 614



 Score = 44.3 bits (103), Expect = 0.089,   Method: Compositional matrix adjust.
 Identities = 35/143 (24%), Positives = 70/143 (48%), Gaps = 7/143 (4%)

Query: 206  RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP- 264
            +P   ++L  +   QV  G      +T  G V+  G    G+LG G   +   P  + P 
Sbjct: 3567 KPLACDSLSVLKPTQVIGGEQTMFAVTSYGKVYASGYTESGRLGIG-PYNPKNPYVVTPQ 3625

Query: 265  -LEEVGSVVQIA--AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 321
             ++ + +++++A  +G  + LA++  G VY++G G +  LG G +    +P+ +Q+   K
Sbjct: 3626 LVQGLNNIIKVAVNSGGRHCLALSTTGEVYAWGDGDDGKLGLGNRVTHSKPQLVQSLSDK 3685

Query: 322  GIHVVRVSAGDEHVVALDSSGYV 344
             I  + ++ G  H  A+   G++
Sbjct: 3686 CI--IDIACGGFHSAAISRYGHL 3706


>gi|148654597|ref|YP_001274802.1| regulator of chromosome condensation, RCC1 [Roseiflexus sp. RS-1]
 gi|148566707|gb|ABQ88852.1| regulator of chromosome condensation, RCC1 [Roseiflexus sp. RS-1]
          Length = 837

 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 101/233 (43%), Gaps = 14/233 (6%)

Query: 111 AGNMQITTGRYHTLLISNSSVFSC-GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G   +  G  HT  + ++    C G +  G LG G  T +    T       + V  ++
Sbjct: 576 SGATALAAGNSHTCTLLDTGTVQCWGWNSSGQLGDGTRTDR---VTPAAVSGLSGVTALA 632

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
           A  NH   ++ SG V   G NSS   G   T      P  V  L GV    + AG N T 
Sbjct: 633 AGANHTCALMDSGTVQCWGRNSSGQLGD-GTRTDRVTPAAVSGLSGV--TALAAGANHTC 689

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
            L   G V   G N+ GQLG G T DR TP +++ L  V ++V   AG ++  A+   G 
Sbjct: 690 ALMDSGTVQCWGRNSSGQLGDGTTTDRVTPAAVSGLSGVTALV---AGANHTCALMPTGT 746

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           V  +G      LG G   D L P A+         +  ++AG EH  A+ ++G
Sbjct: 747 VQCWGKNEFGQLGDGTTTDRLTPVAVSGLS----GITALAAGSEHTCAVLNTG 795



 Score = 71.6 bits (174), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 73/233 (31%), Positives = 100/233 (42%), Gaps = 16/233 (6%)

Query: 114 MQITTGRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + +  GRYHT  L++  +V+  G +  G LG G  T + +    +     + V  ++A  
Sbjct: 79  IALAAGRYHTCALLNTGTVWCWGWNGSGQLGDGTTTDRAMP---VAVSGLSGVTALAAGR 135

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
            H   +L +G V   G NSS   G    TNR    P  V  L GV    + AG   T  L
Sbjct: 136 YHTCALLNTGTVQCWGLNSSGQLGDWTITNR--VTPVAVSGLSGV--IALAAGDRHTCAL 191

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
                V   G N HGQLG G T DR TP +++ L     V  +AAG  +  A    G V 
Sbjct: 192 LDTRTVRCWGENEHGQLGDGTTNDRWTPVAVSGLS---GVTALAAGGRHTCAALNTGTVQ 248

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            +G      LG G +   L P A+            ++AG EH  AL  +G V
Sbjct: 249 CWGGNGAGQLGDGTRTSRLTPMAVSGLS----GATALAAGFEHTCALLDTGTV 297



 Score = 60.8 bits (146), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 94/229 (41%), Gaps = 14/229 (6%)

Query: 111 AGNMQITTGRYHTLLISNSSVFSC-GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G   +  GRYHT  + N+    C G +  G LG    T +    T +     + V+ ++
Sbjct: 126 SGVTALAAGRYHTCALLNTGTVQCWGLNSSGQLGDWTITNR---VTPVAVSGLSGVIALA 182

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
           A + H   +L +  V   G+N     G   TN   + P  V  L GV    + AG   T 
Sbjct: 183 AGDRHTCALLDTRTVRCWGENEHGQLGDGTTNDR-WTPVAVSGLSGV--TALAAGGRHTC 239

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
                G V   G N  GQLG G    R TP +++ L        +AAG  +  A+   G 
Sbjct: 240 AALNTGTVQCWGGNGAGQLGDGTRTSRLTPMAVSGLS---GATALAAGFEHTCALLDTGT 296

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           V  +G  S+  LG G     L P A+         V  ++AGD H  A+
Sbjct: 297 VRCWGLNSSGQLGDGTTERRLTPVAVSGLS----GVTALAAGDFHTCAV 341



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 65/240 (27%), Positives = 96/240 (40%), Gaps = 14/240 (5%)

Query: 106 IVETSAGNMQITTGRYHTLLISNSSVFSC-GSSLCGVLGHGPETTQCVSFTRINFPSAAH 164
           +V   +G   +T G  HT  +  +    C G +  G LG G    +    T +     + 
Sbjct: 421 VVSGLSGATALTAGDRHTCAVLQTRTAQCWGENSPGQLGDGTTERR---LTPVTVSGLSG 477

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
              ++A + H   ++        G NSS   G   T R +  P  V  L       + AG
Sbjct: 478 ATSLAAGDGHTCALMNVRTAQCWGRNSSGQLGDGTTERRLT-PVTVSGLSAA--TALAAG 534

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
            + T  L     V   G N+ GQLG G   DR TP +++ L        +AAG S+   +
Sbjct: 535 DSHTCALLDTRRVRCWGRNSSGQLGDGTRTDRVTPVAVSGLS---GATALAAGNSHTCTL 591

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              G V  +G  S+  LG G + D + P A+         V  ++AG  H  AL  SG V
Sbjct: 592 LDTGTVQCWGWNSSGQLGDGTRTDRVTPAAVSGLS----GVTALAAGANHTCALMDSGTV 647



 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 69/258 (26%), Positives = 101/258 (39%), Gaps = 20/258 (7%)

Query: 88  GNWKRVLRFLQ-SVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGP 146
           G+W    R    +V   S ++  +AG+      R+   L+   +V   G +  G LG G 
Sbjct: 159 GDWTITNRVTPVAVSGLSGVIALAAGD------RHTCALLDTRTVRCWGENEHGQLGDGT 212

Query: 147 ETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR 206
              +   +T +     + V  ++A   H    L +G V   G N +   G   T      
Sbjct: 213 TNDR---WTPVAVSGLSGVTALAAGGRHTCAALNTGTVQCWGGNGAGQLGD-GTRTSRLT 268

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P  V  L G     + AG   T  L   G V   G N+ GQLG G T  R TP +++ L 
Sbjct: 269 PMAVSGLSGA--TALAAGFEHTCALLDTGTVRCWGLNSSGQLGDGTTERRLTPVAVSGLS 326

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
               V  +AAG  +  AV     V  +G  S+  LG G     L P ++           
Sbjct: 327 ---GVTALAAGDFHTCAVLQTETVQCWGLNSSGQLGDGTTERRLTPVSVSGLSGS----T 379

Query: 327 RVSAGDEHVVALDSSGYV 344
            ++AG  H  AL  +G V
Sbjct: 380 ALAAGGVHTCALLQTGTV 397



 Score = 48.1 bits (113), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 87/229 (37%), Gaps = 14/229 (6%)

Query: 111 AGNMQITTGRYHTLLISNSSVFSC-GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G   +  G  HT  + ++    C G +  G LG G    +    T +     + V  ++
Sbjct: 276 SGATALAAGFEHTCALLDTGTVRCWGLNSSGQLGDGTTERR---LTPVAVSGLSGVTALA 332

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
           A + H   VLQ+  V   G NSS   G   T R +  P  V  L G     + AG   T 
Sbjct: 333 AGDFHTCAVLQTETVQCWGLNSSGQLGDGTTERRLT-PVSVSGLSG--STALAAGGVHTC 389

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
            L   G V   G N  GQLG G T  R TP  ++ L        + AG  +  AV     
Sbjct: 390 ALLQTGTVQCWGRNEFGQLGDGTTERRLTPVVVSGLS---GATALTAGDRHTCAVLQTRT 446

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
              +G  S   LG G     L P  +            ++AGD H  AL
Sbjct: 447 AQCWGENSPGQLGDGTTERRLTPVTVSGLS----GATSLAAGDGHTCAL 491


>gi|218189796|gb|EEC72223.1| hypothetical protein OsI_05329 [Oryza sativa Indica Group]
 gi|222619928|gb|EEE56060.1| hypothetical protein OsJ_04872 [Oryza sativa Japonica Group]
          Length = 910

 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 64/223 (28%), Positives = 104/223 (46%), Gaps = 22/223 (9%)

Query: 116 ITTGRYHTLLISN-SSVFSCGSSLCGVLGHGP-ETTQCVSFTRINFPSAAHVVQVSASEN 173
           ++ G +HT LI+    +F+ G    GVLGHG  E+  C     +   S    + V+    
Sbjct: 189 VSCGTWHTALITTMGQLFTFGDGTFGVLGHGNRESISCPK--EVESLSGLKTISVACGVW 246

Query: 174 HAAFVLQ-----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           H A +++           SG++FT GD      GH D   P  +P  V +L      ++ 
Sbjct: 247 HTAAIVEVIVTQSSSSISSGKLFTWGDGDKHRLGHGD-KEPRLKPTCVASLIDYDFHRIA 305

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV--GSVVQIAAGPSY 280
            G + T  LT  G V + G+  +GQLG+     R   K    +EE+   +VVQ+A G  +
Sbjct: 306 CGHSLTVGLTTSGKVLSMGNTVYGQLGN----PRSDGKIPCLVEEIVGENVVQVACGSYH 361

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 323
           +  +T    V+++G G+N  LGHG+  D   P  ++  R + +
Sbjct: 362 VAVLTIKSEVFTWGKGANGRLGHGDIEDRKIPTLVEALRDRSV 404



 Score = 74.7 bits (182), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 53/168 (31%), Positives = 82/168 (48%), Gaps = 5/168 (2%)

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+A V ++G+VFT G+ S    GH      I  PRL+E+L       V  G   T  +T
Sbjct: 87  KHSALVTKNGEVFTWGEESGGRLGHGSREDSIH-PRLIESLAVCNVDIVACGEFHTCAVT 145

Query: 233 IRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
             G ++T G  TH  G LGHG  +    PK IA   E  +V  ++ G  +   +T  G +
Sbjct: 146 TAGELYTWGDGTHNVGLLGHGKDVSHWIPKRIAGALEGLAVAYVSCGTWHTALITTMGQL 205

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           ++FG G+   LGHG +     P+ +++    G+  + V+ G  H  A+
Sbjct: 206 FTFGDGTFGVLGHGNRESISCPKEVESL--SGLKTISVACGVWHTAAI 251


>gi|47226892|emb|CAG05784.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 557

 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/228 (28%), Positives = 105/228 (46%), Gaps = 6/228 (2%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHA 175
           T+      + ++  V++ G +    LG G   +  V   +++  S   VV +S  S  H 
Sbjct: 44  TSANEAIYITADDEVYALGLNCSNCLGTGDSQSSIVP-KKVDILSGRKVVSLSYGSGPHI 102

Query: 176 AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGFLTIR 234
               + G++F  G N     G+  TN+ +  P LV A L      +V  G + +  LT  
Sbjct: 103 LLATEDGELFAWGHNGYSQLGNGTTNQGV-APVLVSANLLNKKVTEVACGSHHSMALTDS 161

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G V+  G N  GQ+G G T ++PTP+ ++   +    V I  G +  LAV  NG VY +G
Sbjct: 162 GEVYAWGYNNCGQVGSGSTANQPTPRRVSSCLQNRVAVSIVCGQTSSLAVVDNGEVYGWG 221

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
              N  LG G   ++L P  +     +G+ V ++ +G  H +AL   G
Sbjct: 222 YNGNGQLGLGNNGNQLTPCRLVAL--QGLCVQQIVSGYAHSLALTDEG 267



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 92/183 (50%), Gaps = 6/183 (3%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           ++  G +H++ +++S  V++ G + CG +G G    Q       +       V +   + 
Sbjct: 147 EVACGSHHSMALTDSGEVYAWGYNNCGQVGSGSTANQPTPRRVSSCLQNRVAVSIVCGQT 206

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
            +  V+ +G+V+  G N +   G  +    +   RLV AL+G+  +Q+ +G   +  LT 
Sbjct: 207 SSLAVVDNGEVYGWGYNGNGQLGLGNNGNQLTPCRLV-ALQGLCVQQIVSGYAHSLALTD 265

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS--YMLAVTGNGVVY 291
            G ++  G+NT+GQLG G+  ++ +P  I  + E   +V+IAA  S     A T +G VY
Sbjct: 266 EGLLYAWGANTYGQLGTGNKSNQLSPVQI--MTEKERIVEIAACHSTHTSAAKTQSGQVY 323

Query: 292 SFG 294
            +G
Sbjct: 324 MWG 326


>gi|407003324|gb|EKE19915.1| hypothetical protein ACD_8C00086G0006 [uncultured bacterium]
          Length = 2770

 Score = 76.3 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 73/247 (29%), Positives = 109/247 (44%), Gaps = 18/247 (7%)

Query: 96  FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
           F+ S +    I  +S G+       Y   L S+ +V++ G    GVLG+G      V + 
Sbjct: 627 FVPSSQEIKSIATSSGGSYG-----YSLALKSDKTVWAWGYGGSGVLGNGTGEQMLVGYP 681

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             +      V Q+SA E H+  +   G  +  GDN+    G+  T      P  V  L G
Sbjct: 682 VRDLTG---VEQISAGEGHSLALRSDGTAWAWGDNAYGMLGNNSTVTSSI-PVQVSGLTG 737

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
           V    V AG   +  L   G V   G NT GQLG G T  R  P  ++ LE+   V+ I+
Sbjct: 738 V--SSVKAGRLHSMALKSDGTVWAWGYNTEGQLGDGSTTQRLVPVQVSGLED---VIAIS 792

Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           AG  + + +  +G V+++G  SN  LG+      L P  +Q     G+ +  +SAG    
Sbjct: 793 AGDYHSMVIKSDGTVWAWGRNSNGQLGNNSTTGSLVP--VQVPGLTGVAL--ISAGTNTS 848

Query: 336 VALDSSG 342
            A+ S G
Sbjct: 849 AAVKSDG 855



 Score = 74.3 bits (181), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 68/234 (29%), Positives = 108/234 (46%), Gaps = 12/234 (5%)

Query: 112 GNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
           G   +  GR H++ L S+ +V++ G +  G LG G  T + V    +       V+ +SA
Sbjct: 737 GVSSVKAGRLHSMALKSDGTVWAWGYNTEGQLGDGSTTQRLVP---VQVSGLEDVIAISA 793

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            + H+  +   G V+  G NS+   G+  T   +  P  V  L GV    ++AG N +  
Sbjct: 794 GDYHSMVIKSDGTVWAWGRNSNGQLGNNSTTGSLV-PVQVPGLTGVAL--ISAGTNTSAA 850

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           +   G     GSNT+GQL  G  + R  P  ++    VG++  + A  S+ L +  +G V
Sbjct: 851 VKSDGTALAWGSNTYGQLCDGSNIQRLIPVQVSEPVGVGALSMVVAN-SHSLILKLDGTV 909

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           +  G      +G+    D   P  +QT    G  VV +SAG  H +AL S G +
Sbjct: 910 WGCGRNDYGPIGNNSITDSKVP--VQTLGLAG--VVSISAGLYHSMALKSDGTI 959



 Score = 58.9 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 63/248 (25%), Positives = 105/248 (42%), Gaps = 14/248 (5%)

Query: 99  SVEHSSDIVETSAGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRI 157
           S+  S   V+   G   I+ G  ++L + S+ +V++ G +  G  G+       V     
Sbjct: 354 SITQSLVPVQVLTGVASISAGYDYSLAVKSDGTVWAWGRNYYGQFGNNSTIDSLVPIQVS 413

Query: 158 NFPSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
                  +   S++    +  L+S G V+  G NS+   G+    + +     V+AL   
Sbjct: 414 GLTGVTSISATSSNNYSHSLALKSDGTVWGWGYNSTGQLGNNSATQSLVP---VQALGLT 470

Query: 217 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
               ++AG N +  L   G     G N+ GQLG+  T     P  +  L  V +   I+A
Sbjct: 471 GVVSISAGSNHSMALKSDGTAWIWGGNSDGQLGNNSTAQSLVPVQVPGLSGVSA---ISA 527

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
           G  + +A+  +G V+++G  S+  LG+      L P  + T          VSAG  H +
Sbjct: 528 GNYHSMALKSDGTVWAWGRNSSGQLGNNSTTVSLVPIQVLT------GTTSVSAGTYHSM 581

Query: 337 ALDSSGYV 344
           AL S G V
Sbjct: 582 ALKSDGAV 589



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 55/210 (26%), Positives = 91/210 (43%), Gaps = 18/210 (8%)

Query: 104 SDIVETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA 162
           + I  TS+ N        H+L L S+ +V+  G +  G LG+   T   V    +     
Sbjct: 419 TSISATSSNNYS------HSLALKSDGTVWGWGYNSTGQLGNNSATQSLVPVQALGLTG- 471

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
             VV +SA  NH+  +   G  +  G NS    G+  T + +  P  V  L GV    ++
Sbjct: 472 --VVSISAGSNHSMALKSDGTAWIWGGNSDGQLGNNSTAQSLV-PVQVPGLSGV--SAIS 526

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
           AG   +  L   G V   G N+ GQLG     +  T  S+ P++ +     ++AG  + +
Sbjct: 527 AGNYHSMALKSDGTVWAWGRNSSGQLG-----NNSTTVSLVPIQVLTGTTSVSAGTYHSM 581

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQP 312
           A+  +G V+ +G+     +      D+L P
Sbjct: 582 ALKSDGAVWGWGNNEYKKIISNTNLDQLVP 611



 Score = 47.8 bits (112), Expect = 0.008,   Method: Composition-based stats.
 Identities = 52/181 (28%), Positives = 77/181 (42%), Gaps = 14/181 (7%)

Query: 167 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGL 225
           QV A   H   +   G V+  G N     G   T NR +  P  V  L  V    ++A  
Sbjct: 272 QVVAGYYHNLALKSDGTVWAWGYNYYGRLGDGSTINRIV--PVQVSGLTEV--SAISAAF 327

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
             +  L   G + T G N  GQLG     +    +S+ P++ +  V  I+AG  Y LAV 
Sbjct: 328 GHSMALKSDGTLWTWGYNNRGQLG-----NNSITQSLVPVQVLTGVASISAGYDYSLAVK 382

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD--EHVVALDSSGY 343
            +G V+++G       G+    D L P  IQ     G+  +  ++ +   H +AL S G 
Sbjct: 383 SDGTVWAWGRNYYGQFGNNSTIDSLVP--IQVSGLTGVTSISATSSNNYSHSLALKSDGT 440

Query: 344 V 344
           V
Sbjct: 441 V 441


>gi|395541970|ref|XP_003772909.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC6 [Sarcophilus harrisii]
          Length = 1032

 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 94/181 (51%), Gaps = 6/181 (3%)

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
            +VQ +  E H+  +L  G V++CG+NS    G ++  +   RP  ++AL+      V+ 
Sbjct: 38  QIVQAACGERHSLLLLADGTVWSCGNNSYGQLGRKNIKKSK-RPAPIQALETQVVVSVSC 96

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAGPSYML 282
           G   +  +   G +++ GS + GQLG  +  D+   PK+IA L     ++Q++ G  + +
Sbjct: 97  GKEHSLAICKTGRIYSWGSGSRGQLGIKEVKDQCSIPKNIAALSR-DKIIQVSCGHYHSI 155

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           A+T +G V+S+G   +  LG G     +  P+ + +    GI + +V+AG  H  AL  S
Sbjct: 156 ALTQDGKVFSWGDNDHGQLGLGTNFPSQASPQRVNSL--DGIPLAQVAAGGSHSFALSLS 213

Query: 342 G 342
           G
Sbjct: 214 G 214



 Score = 68.2 bits (165), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 55/165 (33%), Positives = 76/165 (46%), Gaps = 9/165 (5%)

Query: 185 FTCGDNS----SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           +  GDNS        G R + R + R R   +L G    Q   G   +  L   G V +C
Sbjct: 3   YCWGDNSFRQLGINAGRRASPR-VVRCREGASLGGQQIVQAACGERHSLLLLADGTVWSC 61

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
           G+N++GQLG  +      P  I  LE    VV ++ G  + LA+   G +YS+GSGS   
Sbjct: 62  GNNSYGQLGRKNIKKSKRPAPIQALE-TQVVVSVSCGKEHSLAICKTGRIYSWGSGSRGQ 120

Query: 301 LGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           LG  E  D+   P+ I    R  I  ++VS G  H +AL   G V
Sbjct: 121 LGIKEVKDQCSIPKNIAALSRDKI--IQVSCGHYHSIALTQDGKV 163



 Score = 65.1 bits (157), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 53/190 (27%), Positives = 91/190 (47%), Gaps = 7/190 (3%)

Query: 110 SAGNMQITTG----RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV 165
           S G  QI       R+  LL+++ +V+SCG++  G LG      +      I       V
Sbjct: 33  SLGGQQIVQAACGERHSLLLLADGTVWSCGNNSYGQLGR-KNIKKSKRPAPIQALETQVV 91

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
           V VS  + H+  + ++G++++ G  S    G ++       P+ + AL      QV+ G 
Sbjct: 92  VSVSCGKEHSLAICKTGRIYSWGSGSRGQLGIKEVKDQCSIPKNIAALSRDKIIQVSCGH 151

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             +  LT  G V + G N HGQLG G     + +P+ +  L+ +  + Q+AAG S+  A+
Sbjct: 152 YHSIALTQDGKVFSWGDNDHGQLGLGTNFPSQASPQRVNSLDGI-PLAQVAAGGSHSFAL 210

Query: 285 TGNGVVYSFG 294
           + +G  Y +G
Sbjct: 211 SLSGTSYGWG 220



 Score = 58.5 bits (140), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 45/136 (33%), Positives = 66/136 (48%), Gaps = 3/136 (2%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           ++ G+ H+L I  +  ++S GS   G LG      QC     I   S   ++QVS    H
Sbjct: 94  VSCGKEHSLAICKTGRIYSWGSGSRGQLGIKEVKDQCSIPKNIAALSRDKIIQVSCGHYH 153

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRP-IFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           +  + Q G+VF+ GDN     G   TN P    P+ V +L G+P  QV AG + +  L++
Sbjct: 154 SIALTQDGKVFSWGDNDHGQLG-LGTNFPSQASPQRVNSLDGIPLAQVAAGGSHSFALSL 212

Query: 234 RGHVHTCGSNTHGQLG 249
            G  +  G N  GQL 
Sbjct: 213 SGTSYGWGRNKEGQLA 228



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 68/225 (30%), Positives = 94/225 (41%), Gaps = 45/225 (20%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++ G YH++ L  +  VFS G +  G LG G       S  R+N      + QV+A  
Sbjct: 145 IQVSCGHYHSIALTQDGKVFSWGDNDHGQLGLGTNFPSQASPQRVNSLDGIPLAQVAAGG 204

Query: 173 NHAAFVL------------QSGQVFTCGDNSS-----FCCGHRDTNRPIFRPRLVEALKG 215
           +H+ F L            + GQ+   G N+S     +C  H             EAL  
Sbjct: 205 SHS-FALSLSGTSYGWGRNKEGQLALSGKNASVVSINYCIWHE-----------AEALT- 251

Query: 216 VPCKQVTAGLNFTGFLTI--------RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE 267
             CK+  +   F G   +         G V T GSN  GQLGHG  + +P    I    E
Sbjct: 252 --CKRSNSIKEFQGLKELLNRSRQIADGKVLTFGSNNSGQLGHG-LITKPRGPQIVESAE 308

Query: 268 VGSVVQIAAGPSYMLAVT-GNGVVYSFGSGSNFCLGHGEQHDELQ 311
           + S  QIA G  + LA    +G V SFG GS   L +  Q   L+
Sbjct: 309 LFS--QIACGSHHTLAYACTSGQVLSFGCGSQRHLTNSLQQGSLE 351


>gi|357135039|ref|XP_003569119.1| PREDICTED: uncharacterized protein LOC100832036 [Brachypodium
           distachyon]
          Length = 913

 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 83/176 (47%), Gaps = 5/176 (2%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  V     HA+ V +SG+VFT G++S    GH  T      PRLVE+L       V  G
Sbjct: 79  VYHVDCGVRHASLVTRSGEVFTWGEDSGGRLGH-GTREDSVHPRLVESLAACNIDFVACG 137

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
              T  +T  G ++T G  TH  G LGHG  +    P+ I+   E   V  ++ G  +  
Sbjct: 138 EFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGALEGLQVAYVSCGTWHTA 197

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            +T  G +++FG GS   LGHG       PR +++    G+  + V+ G  H  A+
Sbjct: 198 LITSMGQLFTFGDGSFGVLGHGNVKSISCPREVESL--SGLKTIAVACGVWHTAAI 251



 Score = 74.3 bits (181), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 61/221 (27%), Positives = 104/221 (47%), Gaps = 18/221 (8%)

Query: 116 ITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           ++ G +HT LI++   +F+ G    GVLGHG    + +S  R +   S    + V+    
Sbjct: 189 VSCGTWHTALITSMGQLFTFGDGSFGVLGHG--NVKSISCPREVESLSGLKTIAVACGVW 246

Query: 174 HAAFVLQ-----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           H A +++           +G++FT GD      GH D       P  V +L      +V 
Sbjct: 247 HTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGD-KEARLNPTCVASLIDYDFYRVA 305

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
            G + T  LT  G V T G++ +GQLG+ ++  RP         E   V+Q+A G  ++ 
Sbjct: 306 CGHSLTVGLTTSGKVWTMGNSVYGQLGNPNSDGRPCLVGDKITNE--HVLQVACGSYHVS 363

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 323
            +T    V+++G G+N  LGHG+  D+  P  ++  + + +
Sbjct: 364 VLTSRSEVFTWGKGANGRLGHGDIEDQKVPTLVEALKDRSV 404



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 64/246 (26%), Positives = 106/246 (43%), Gaps = 33/246 (13%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSASE 172
           R+ +L+  +  VF+ G    G LGHG       P   + ++   I+F        V+  E
Sbjct: 87  RHASLVTRSGEVFTWGEDSGGRLGHGTREDSVHPRLVESLAACNIDF--------VACGE 138

Query: 173 NHAAFVLQSGQVFTCGDNSSFC--CGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            H   V  +G+++T GD +      GH  D    I R R+  AL+G+    V+ G   T 
Sbjct: 139 FHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPR-RISGALEGLQVAYVSCGTWHTA 197

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV----- 284
            +T  G + T G  + G LGHG+      P+ +  L  + ++  +A G  +  A+     
Sbjct: 198 LITSMGQLFTFGDGSFGVLGHGNVKSISCPREVESLSGLKTIA-VACGVWHTAAIVEVIV 256

Query: 285 ------TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
                    G ++++G G    LGHG++   L P  + +      +  RV+ G    V L
Sbjct: 257 TQSSATVSAGKLFTWGDGDKHRLGHGDKEARLNPTCVASLIDYDFY--RVACGHSLTVGL 314

Query: 339 DSSGYV 344
            +SG V
Sbjct: 315 TTSGKV 320



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 66/140 (47%), Gaps = 4/140 (2%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E+   +    V  G+     +T  G V T G ++ G+LGHG   D   P+ +  L 
Sbjct: 68  PKPLESNLVLDVYHVDCGVRHASLVTRSGEVFTWGEDSGGRLGHGTREDSVHPRLVESLA 127

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIH 324
              ++  +A G  +  AVT  G +Y++G G++    LGHG       PR I +   +G+ 
Sbjct: 128 AC-NIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRI-SGALEGLQ 185

Query: 325 VVRVSAGDEHVVALDSSGYV 344
           V  VS G  H   + S G +
Sbjct: 186 VAYVSCGTWHTALITSMGQL 205


>gi|413951231|gb|AFW83880.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 959

 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 64/223 (28%), Positives = 104/223 (46%), Gaps = 22/223 (9%)

Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGP-ETTQCVSFTRINFPSAAHVVQVSASEN 173
           ++ G +HT L+ S   +F+ G    GVLGHG  E+  C     +   S    + V+    
Sbjct: 189 VSCGTWHTALVTSRGQLFTFGDGTFGVLGHGNRESFSCPR--EVESLSGLKTIAVACGVW 246

Query: 174 HAAFVLQ-----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           H A V++           SG++FT GD      GH D   P  +P  V +L      ++ 
Sbjct: 247 HTAAVVEVIVTQSSSSMSSGKLFTWGDGDKHRLGHGD-KEPKLKPTCVASLIDYDFCRIA 305

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS--VVQIAAGPSY 280
            G + T  LT  G V + G+  +GQLG+     R   K    +E++    VVQ+A G  +
Sbjct: 306 CGHSLTVGLTTSGQVLSMGNTVYGQLGN----PRSDGKLPCLIEDIMGEHVVQVACGSYH 361

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 323
           +  +T    V+++G G+N  LGHG+  D   P  +++ R + +
Sbjct: 362 VAVLTNKSEVFTWGKGANGRLGHGDVEDRKIPTLVESLRDRAV 404



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 56/176 (31%), Positives = 84/176 (47%), Gaps = 5/176 (2%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  V     HAA V ++G+VFT G+ S    GH      +  PRLVE+L       V  G
Sbjct: 79  VYHVDCGVKHAALVTKNGEVFTWGEESGGRLGHGSREDSVH-PRLVESLAICNVDIVACG 137

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
              T  +T  G ++T G  TH  G LG+G  +    PK I+ + E   V  ++ G  +  
Sbjct: 138 EFHTCAVTTSGELYTWGDGTHNIGLLGNGTDVSHWIPKRISGVLEGHQVAYVSCGTWHTA 197

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            VT  G +++FG G+   LGHG +     PR +++    G+  + V+ G  H  A+
Sbjct: 198 LVTSRGQLFTFGDGTFGVLGHGNRESFSCPREVESL--SGLKTIAVACGVWHTAAV 251


>gi|348528302|ref|XP_003451657.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Oreochromis
           niloticus]
          Length = 531

 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/220 (29%), Positives = 103/220 (46%), Gaps = 6/220 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQ 183
           + ++  VF  G +    LG G   +  V   +++F S   VV +S  S  H     + G+
Sbjct: 37  ITNDDEVFVFGLNCSNCLGTGDSLSTIVP-KKLDFLSGRKVVSLSYGSGPHILLATEDGE 95

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
           +F  G N     G+  TN+ +  P LV A L      +V  G + +  LT  G V+  G 
Sbjct: 96  LFAWGHNGYSQLGNGTTNQGV-APVLVSANLLNKKVTEVACGSHHSMALTDTGEVYAWGY 154

Query: 243 NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
           N  GQ+G G T ++PTP+ ++   +    V I  G +  LAV  NG VY +G   N  LG
Sbjct: 155 NNCGQVGSGSTANQPTPRRVSSCLQNKVAVSIVCGQTSSLAVVDNGEVYGWGYNGNGQLG 214

Query: 303 HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            G   +++ P   +    +G+ V ++ +G  H +AL   G
Sbjct: 215 LGNNGNQVTP--CRLVGLQGLCVQQIVSGYAHSMALTDEG 252



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 91/183 (49%), Gaps = 6/183 (3%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           ++  G +H++ ++++  V++ G + CG +G G    Q       +       V +   + 
Sbjct: 132 EVACGSHHSMALTDTGEVYAWGYNNCGQVGSGSTANQPTPRRVSSCLQNKVAVSIVCGQT 191

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
            +  V+ +G+V+  G N +   G  +    +   RLV  L+G+  +Q+ +G   +  LT 
Sbjct: 192 SSLAVVDNGEVYGWGYNGNGQLGLGNNGNQVTPCRLV-GLQGLCVQQIVSGYAHSMALTD 250

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS--YMLAVTGNGVVY 291
            G ++  G+NT+GQLG G+  ++ +P  I  L E   +V+IAA  S     A T +G VY
Sbjct: 251 EGLLYAWGANTYGQLGTGNKSNQLSPVQI--LTEKERIVEIAACHSTHTSAAKTQSGQVY 308

Query: 292 SFG 294
            +G
Sbjct: 309 MWG 311



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/172 (25%), Positives = 76/172 (44%), Gaps = 2/172 (1%)

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
           +S N A ++    +VF  G N S C G  D+   I  P+ ++ L G     ++ G     
Sbjct: 29  SSANEAIYITNDDEVFVFGLNCSNCLGTGDSLSTIV-PKKLDFLSGRKVVSLSYGSGPHI 87

Query: 230 FL-TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
            L T  G +   G N + QLG+G T     P  ++       V ++A G  + +A+T  G
Sbjct: 88  LLATEDGELFAWGHNGYSQLGNGTTNQGVAPVLVSANLLNKKVTEVACGSHHSMALTDTG 147

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            VY++G  +   +G G   ++  PR + +  +  + V  V      +  +D+
Sbjct: 148 EVYAWGYNNCGQVGSGSTANQPTPRRVSSCLQNKVAVSIVCGQTSSLAVVDN 199


>gi|242055697|ref|XP_002456994.1| hypothetical protein SORBIDRAFT_03g046900 [Sorghum bicolor]
 gi|241928969|gb|EES02114.1| hypothetical protein SORBIDRAFT_03g046900 [Sorghum bicolor]
          Length = 870

 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/227 (28%), Positives = 105/227 (46%), Gaps = 30/227 (13%)

Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGP-ETTQCVSFTRINFPSAAHVVQVSASEN 173
           ++ G +HT L+ S   +F+ G    GVLGHG  E+  C     +   S    + V+    
Sbjct: 189 VSCGTWHTALVTSRGQLFTFGDGTFGVLGHGNRESFSCPR--EVESLSGLKTIAVACGVW 246

Query: 174 HAAFVLQ-----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           H A V++           SG++FT GD      GH D   P  +P  V +L      ++ 
Sbjct: 247 HTAAVVEVIVTQSSSSMSSGKLFTWGDGDKHRLGHGD-KEPRLKPTCVASLIDYDFCRIA 305

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL----EEVGS--VVQIAA 276
            G + T  LT  G + + G+  +GQLG+        P+S   L    E++    VVQ+A 
Sbjct: 306 CGHSLTVGLTTSGQILSMGNTVYGQLGN--------PRSDGKLPCLVEDIMGEHVVQVAC 357

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 323
           G  ++  +T    V+++G G+N  LGHG+  D   P  ++  R +G+
Sbjct: 358 GSYHVAVLTNKSEVFTWGKGANGRLGHGDIEDRKIPTLVEALRDRGV 404



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/176 (31%), Positives = 83/176 (47%), Gaps = 5/176 (2%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  V     HAA V ++G+VFT G+ S    GH      +  PRLVE+L       V  G
Sbjct: 79  VYHVDCGVKHAALVTKNGEVFTWGEESGGRLGHGSREDSVH-PRLVESLAICNVDIVACG 137

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
              T  +T  G ++T G  TH  G LG+G  +    PK I+   E   V  ++ G  +  
Sbjct: 138 EFHTCAVTTAGELYTWGDGTHNIGLLGNGTDVSHWIPKRISGALEGHQVAYVSCGTWHTA 197

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            VT  G +++FG G+   LGHG +     PR +++    G+  + V+ G  H  A+
Sbjct: 198 LVTSRGQLFTFGDGTFGVLGHGNRESFSCPREVESL--SGLKTIAVACGVWHTAAV 251



 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 61/246 (24%), Positives = 104/246 (42%), Gaps = 33/246 (13%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSASE 172
           ++  L+  N  VF+ G    G LGHG       P   + ++   ++         V+  E
Sbjct: 87  KHAALVTKNGEVFTWGEESGGRLGHGSREDSVHPRLVESLAICNVDI--------VACGE 138

Query: 173 NHAAFVLQSGQVFTCGD---NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            H   V  +G+++T GD   N        D +  I + R+  AL+G     V+ G   T 
Sbjct: 139 FHTCAVTTAGELYTWGDGTHNIGLLGNGTDVSHWIPK-RISGALEGHQVAYVSCGTWHTA 197

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT---- 285
            +T RG + T G  T G LGHG+      P+ +  L  + ++  +A G  +  AV     
Sbjct: 198 LVTSRGQLFTFGDGTFGVLGHGNRESFSCPREVESLSGLKTIA-VACGVWHTAAVVEVIV 256

Query: 286 -------GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
                   +G ++++G G    LGHG++   L+P  + +         R++ G    V L
Sbjct: 257 TQSSSSMSSGKLFTWGDGDKHRLGHGDKEPRLKPTCVASL--IDYDFCRIACGHSLTVGL 314

Query: 339 DSSGYV 344
            +SG +
Sbjct: 315 TTSGQI 320



 Score = 46.6 bits (109), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 4/140 (2%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E+   +    V  G+     +T  G V T G  + G+LGHG   D   P+ +  L 
Sbjct: 68  PKPLESKLVLDVYHVDCGVKHAALVTKNGEVFTWGEESGGRLGHGSREDSVHPRLVESL- 126

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIH 324
            + +V  +A G  +  AVT  G +Y++G G++    LG+G       P+ I +   +G  
Sbjct: 127 AICNVDIVACGEFHTCAVTTAGELYTWGDGTHNIGLLGNGTDVSHWIPKRI-SGALEGHQ 185

Query: 325 VVRVSAGDEHVVALDSSGYV 344
           V  VS G  H   + S G +
Sbjct: 186 VAYVSCGTWHTALVTSRGQL 205


>gi|348683969|gb|EGZ23784.1| hypothetical protein PHYSODRAFT_311023 [Phytophthora sojae]
          Length = 625

 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 69/225 (30%), Positives = 107/225 (47%), Gaps = 12/225 (5%)

Query: 129 SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
           +++ S G    GVLGHG +T    +   I   ++  V  VSA  +H   + +   V+  G
Sbjct: 265 NNLVSWGRGDYGVLGHG-DTESSATPRVIKIFNSMRVTCVSAGLHHVLVLTELDGVYAFG 323

Query: 189 DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG----LNFTGFLTIRGHVHTCGSNT 244
           D S+   G  DTN P   P  + +L G+    V+AG    +  TG       V++ G   
Sbjct: 324 DGSNGKLGLGDTN-PRLSPARITSLDGLNVVHVSAGDEHSVVMTGETFFNRQVYSWGLGK 382

Query: 245 HGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG--NGV-VYSFGSGSNFCL 301
           +G+LGH D L R  P  +        V+ + AG ++ LA +    GV V+S+G+GS   L
Sbjct: 383 NGRLGHNDELTRLKPTRVNCFRGR-KVITLVAGGAHNLATSEMPRGVCVWSWGAGSYGQL 441

Query: 302 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSL 346
           GH +  D L PR++   R + I    + AG  H +A+  S  + L
Sbjct: 442 GHRDTWDTLIPRSVDEIRYESIRY--IDAGQRHSLAISESKQLWL 484


>gi|157124777|ref|XP_001660519.1| hypothetical protein AaeL_AAEL009960 [Aedes aegypti]
 gi|108873890|gb|EAT38115.1| AAEL009960-PA, partial [Aedes aegypti]
          Length = 736

 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/214 (28%), Positives = 95/214 (44%), Gaps = 2/214 (0%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           T G +   ++ + SVF+ G    G LGH    T     TR++     +++  +       
Sbjct: 358 TNGAHFVAVMYDGSVFTWGEGNKGQLGHNALETWRHYPTRVDAIQRYNIIGAATGNGFTM 417

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
           F    G V +CGDNSS C GH +    +  P++V+ L  +  +QV  G      L+  GH
Sbjct: 418 FWTNLGVVLSCGDNSSGCLGHGN-QISLLVPKIVQKLNNIRIRQVACGSQHVVALSDGGH 476

Query: 237 VHTCGSNTHGQLGHGD-TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
           ++T GS+  G LG G   L    P+ +   + + ++  I  GP   + +T  G  Y  GS
Sbjct: 477 LYTWGSSNDGALGLGKQMLVSAEPRRLIVSQMIQNIRDIYCGPDCTVILTEGGSCYCCGS 536

Query: 296 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
                LG G +  +L      TF  + I  V V+
Sbjct: 537 NRYNRLGFGTKITQLTALQKVTFVAEKILSVSVA 570



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 75/154 (48%), Gaps = 1/154 (0%)

Query: 153 SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA 212
           S   +  P    + Q++ +  H   V+  G VFT G+ +    GH         P  V+A
Sbjct: 341 SLIPLQLPPTGKIRQIATNGAHFVAVMYDGSVFTWGEGNKGQLGHNALETWRHYPTRVDA 400

Query: 213 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
           ++         G  FT F T  G V +CG N+ G LGHG+ +    PK +  L  +  + 
Sbjct: 401 IQRYNIIGAATGNGFTMFWTNLGVVLSCGDNSSGCLGHGNQISLLVPKIVQKLNNI-RIR 459

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+A G  +++A++  G +Y++GS ++  LG G+Q
Sbjct: 460 QVACGSQHVVALSDGGHLYTWGSSNDGALGLGKQ 493



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 42/125 (33%), Positives = 64/125 (51%), Gaps = 7/125 (5%)

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD--RPTPKSIAPLEEVGSVVQIAAGPS 279
           T G +F   +   G V T G    GQLGH + L+  R  P  +  ++   +++  A G  
Sbjct: 358 TNGAHFVAVM-YDGSVFTWGEGNKGQLGH-NALETWRHYPTRVDAIQRY-NIIGAATGNG 414

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
           + +  T  GVV S G  S+ CLGHG Q   L P+ +Q  +   I + +V+ G +HVVAL 
Sbjct: 415 FTMFWTNLGVVLSCGDNSSGCLGHGNQISLLVPKIVQ--KLNNIRIRQVACGSQHVVALS 472

Query: 340 SSGYV 344
             G++
Sbjct: 473 DGGHL 477



 Score = 44.3 bits (103), Expect = 0.090,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 6/92 (6%)

Query: 124 LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 183
           +L    S + CGS+    LG G + TQ  +  ++ F  A  ++ VS +E   AF+++   
Sbjct: 524 ILTEGGSCYCCGSNRYNRLGFGTKITQLTALQKVTF-VAEKILSVSVAETFGAFLIEGNY 582

Query: 184 VFTCGDNSS--FCCGHRDTNRPIFRPRLVEAL 213
           V T G+N++     GH D N     P +V++L
Sbjct: 583 VITTGENNNGQRGLGHADENG---EPTMVKSL 611



 Score = 43.1 bits (100), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 61/234 (26%), Positives = 93/234 (39%), Gaps = 60/234 (25%)

Query: 118 TGRYHTLLISN-SSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPS--AAHVVQ 167
           TG   T+  +N   V SCG +  G LGHG       P+  Q ++  RI   +  + HVV 
Sbjct: 411 TGNGFTMFWTNLGVVLSCGDNSSGCLGHGNQISLLVPKIVQKLNNIRIRQVACGSQHVVA 470

Query: 168 VS--------ASENHAAF-------------------VLQSGQVFTCGDN---------S 191
           +S         S N  A                    ++Q+ +   CG +         S
Sbjct: 471 LSDGGHLYTWGSSNDGALGLGKQMLVSAEPRRLIVSQMIQNIRDIYCGPDCTVILTEGGS 530

Query: 192 SFCCGHRDTNRPIFRPRLVE--ALKGV-----PCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
            +CCG    NR  F  ++ +  AL+ V         V+    F  FL    +V T G N 
Sbjct: 531 CYCCGSNRYNRLGFGTKITQLTALQKVTFVAEKILSVSVAETFGAFLIEGNYVITTGENN 590

Query: 245 HGQ--LGHGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
           +GQ  LGH D    PT  KS+        + +I    +YM+A++ +  V  +G+
Sbjct: 591 NGQRGLGHADENGEPTMVKSLMS----RFITKIKCHSTYMVAISDDNCVLFWGT 640


>gi|432930911|ref|XP_004081521.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Oryzias
           latipes]
          Length = 531

 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 101/217 (46%), Gaps = 6/217 (2%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           +  VF  G +    LG G   +  V   +++F +   +V +S  S  H     + G++F 
Sbjct: 40  DDEVFVLGLNCSNCLGTGDSQSTIVP-KKLDFLNGRKIVSLSYGSGPHVLMATEDGELFA 98

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH 245
            G N     G+  TN+ +  P LV A +      +V  G + +  LT  G V+  G N  
Sbjct: 99  WGHNGYSQLGNGTTNQGV-APVLVSANMLNKKVVEVACGSHHSMALTDSGEVYAWGYNNC 157

Query: 246 GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
           GQ+G G T ++PTP+ ++   +    V I  G +  LAV  NG VY +G   N  LG G 
Sbjct: 158 GQVGSGSTANQPTPRRVSSCLQNKVAVGIVCGQTSSLAVVDNGEVYGWGYNGNGQLGLGN 217

Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
             ++L P  +     +G+ V+++  G  H +AL   G
Sbjct: 218 NGNQLTPCRLVAL--QGLCVLQIVCGYAHCLALSDEG 252



 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 85/162 (52%), Gaps = 3/162 (1%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTA 223
           VV+V+   +H+  +  SG+V+  G N+    G   T N+P  R R+   L+      +  
Sbjct: 130 VVEVACGSHHSMALTDSGEVYAWGYNNCGQVGSGSTANQPTPR-RVSSCLQNKVAVGIVC 188

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G   +  +   G V+  G N +GQLG G+  ++ TP  +  L+ +  V+QI  G ++ LA
Sbjct: 189 GQTSSLAVVDNGEVYGWGYNGNGQLGLGNNGNQLTPCRLVALQGL-CVLQIVCGYAHCLA 247

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
           ++  GV+Y++GS +   LG G + ++L P  I + + + + V
Sbjct: 248 LSDEGVLYAWGSNTYGQLGTGNKSNQLSPVQIMSEKERIVEV 289



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 73/157 (46%), Gaps = 2/157 (1%)

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
           +S N A +V    +VF  G N S C G  D+   I  P+ ++ L G     ++ G     
Sbjct: 29  SSANEAVYVTHDDEVFVLGLNCSNCLGTGDSQSTIV-PKKLDFLNGRKIVSLSYGSGPHV 87

Query: 230 FL-TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
            + T  G +   G N + QLG+G T     P  ++       VV++A G  + +A+T +G
Sbjct: 88  LMATEDGELFAWGHNGYSQLGNGTTNQGVAPVLVSANMLNKKVVEVACGSHHSMALTDSG 147

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
            VY++G  +   +G G   ++  PR + +  +  + V
Sbjct: 148 EVYAWGYNNCGQVGSGSTANQPTPRRVSSCLQNKVAV 184


>gi|395848168|ref|XP_003796731.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Otolemur
           garnettii]
          Length = 551

 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 94/218 (43%), Gaps = 4/218 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  +F  G++ CG LG G +    +   +++  S   +  +S  S  H       G+VFT
Sbjct: 64  NDEIFVLGTNCCGCLGLG-DIQSTIEPRKLDSLSGKKIACLSYGSGPHVVLATTEGEVFT 122

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN  +    +   L      +V  G   +  LT  G V   G N  G
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 182

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T ++P P+ +    +   +V IA G    +AV   G V+ +G   N  LG G  
Sbjct: 183 QVGSGSTANQPIPRRVTGCLQNKVIVTIACGQMCSMAVVDTGEVFVWGYNGNGQLGLGSS 242

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            +  QP   +    +GI V RV+ G  H + L   G V
Sbjct: 243 GN--QPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQV 278



 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 91/185 (49%), Gaps = 8/185 (4%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G YH+L L S+  VF+ G +  G +G G    Q +            +V ++  +
Sbjct: 155 IEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVIVTIACGQ 214

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             +  V+ +G+VF  G N +   G   + N+P   P  + AL+G+  ++V  G   T  L
Sbjct: 215 MCSMAVVDTGEVFVWGYNGNGQLGLGSSGNQPT--PCRIAALQGIRVQRVACGYAHTLVL 272

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS--YMLAVTGNGV 289
           T  G V+  G+N++GQLG G+  ++  P  +  + E   V++IAA  S     A T  G 
Sbjct: 273 TDEGQVYAWGANSYGQLGTGNKSNQSYPTPV--VVEKDRVIEIAACHSAHTSAAKTQGGH 330

Query: 290 VYSFG 294
           VY +G
Sbjct: 331 VYMWG 335



 Score = 39.7 bits (91), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 53/116 (45%), Gaps = 3/116 (2%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE-EVGSVVQIAAGPSYMLAVTGNG 288
           + T+   +   G+N  G LG GD      P+ +  L  +  + +   +GP  +LA T  G
Sbjct: 60  YTTVNDEIFVLGTNCCGCLGLGDIQSTIEPRKLDSLSGKKIACLSYGSGPHVVLATT-EG 118

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            V+++G  +   LG+G  +  L P  I T       V+ V+ G  H + L S G V
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVIEVACGSYHSLVLTSDGEV 173


>gi|114595107|ref|XP_001160807.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 1
           [Pan troglodytes]
          Length = 984

 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/241 (27%), Positives = 109/241 (45%), Gaps = 19/241 (7%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 165
           +Q  +G  H+LL+ +N  V SCG +  G LG         PE  Q +    ++       
Sbjct: 26  LQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLTVDL------ 79

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
             VS  + H+  V   G+VF  G  S    G  +     F P+ +  L G+   QV+ G 
Sbjct: 80  --VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGH 137

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             +  L+    V + G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A+
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFAL 196

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQP-RAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           +  G  + +GS S+  L    ++  +Q  + +     K + VV +S GD H   L   G 
Sbjct: 197 SLCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGK 256

Query: 344 V 344
           V
Sbjct: 257 V 257



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/182 (29%), Positives = 97/182 (53%), Gaps = 6/182 (3%)

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           A ++Q ++ E H+  +L + +V +CGDNS    G R   R    P  ++AL+ +    V+
Sbjct: 23  AELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGEL-PEPIQALETLTVDLVS 81

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYM 281
            G   +  +  +G V   G+ + GQLG G+  +   TPK I  L  +  ++Q++ G  + 
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGI-KIIQVSCGHYHS 140

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           LA++ +  V+S+G  S+  LG G++   +  P+ +++   +GI + +V+AG  H  AL  
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHSFALSL 198

Query: 341 SG 342
            G
Sbjct: 199 CG 200



 Score = 71.2 bits (173), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 64/187 (34%), Positives = 89/187 (47%), Gaps = 6/187 (3%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++ G YH+L +S +S VFS G +  G LG G E     S  R+       + QV+A  
Sbjct: 131 IQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGG 190

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPI--FRPRLVEALKGVPCKQVTAGLNFTGF 230
            H+  +   G  F  G NSS        N P+   +P  V ALK +    ++ G   T  
Sbjct: 191 AHSFALSLCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAV 250

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA-VTGNGV 289
           LT  G V T G N  GQLG+  T ++  P+ +  ++  G V QI  G  + LA V   G 
Sbjct: 251 LTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERID--GLVSQIDCGSYHTLAYVHTTGQ 308

Query: 290 VYSFGSG 296
           V SFG G
Sbjct: 309 VVSFGHG 315



 Score = 70.9 bits (172), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 65/228 (28%), Positives = 113/228 (49%), Gaps = 12/228 (5%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFT--RINFPSAAHVVQVSASE 172
           ++ G+ H+L + +   VF+ G+   G LG G    + +SFT  +I   +   ++QVS   
Sbjct: 80  VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIG--EFKEISFTPKKITTLNGIKIIQVSCGH 137

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  + +  QVF+ G NS    G          P+ V +L+G+P  QV AG   +  L+
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS 197

Query: 233 IRGHVHTCGSNTHGQL---GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
           + G     GSN+ GQL   G    +    P S+  L+ +G VV I+ G ++   +T +G 
Sbjct: 198 LCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLG-VVYISCGDAHTAVLTQDGK 256

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           V++FG   +  LG+    ++  P+ ++  R  G+ V ++  G  H +A
Sbjct: 257 VFTFGDNRSGQLGYSPTPEKRGPQLVE--RIDGL-VSQIDCGSYHTLA 301



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 69/153 (45%), Gaps = 7/153 (4%)

Query: 193 FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD 252
           FC G   T+    + R      G    Q  +G   +  L     V +CG N+ GQLG   
Sbjct: 3   FCWG---TDSRELQRRRTAGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRG 59

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQ 311
                 P+ I  LE + +V  ++ G  + LAV   G V+++G+GS   LG GE +     
Sbjct: 60  AQRGELPEPIQALETL-TVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFT 118

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           P+ I T    GI +++VS G  H +AL     V
Sbjct: 119 PKKITTL--NGIKIIQVSCGHYHSLALSKDSQV 149


>gi|330800861|ref|XP_003288451.1| hypothetical protein DICPUDRAFT_79261 [Dictyostelium purpureum]
 gi|325081510|gb|EGC35023.1| hypothetical protein DICPUDRAFT_79261 [Dictyostelium purpureum]
          Length = 1909

 Score = 76.3 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 65/236 (27%), Positives = 97/236 (41%), Gaps = 54/236 (22%)

Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
           I   S   +V VS    H+A V  +G++ T G       GH DT   +  P+++++L   
Sbjct: 683 IKLESLTDIVVVSIGFYHSAAVRANGELLTWGVGEEGQLGHGDTQNQV-EPKVIQSLTSF 741

Query: 217 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
              QV  G   T  LT  G V+T GS+ +GQLG GDT     P  +  LE+  +V+QIA+
Sbjct: 742 WITQVQCGEKHTICLTKNGKVYTWGSSEYGQLGLGDTTRYCKPMPVTALEKY-NVLQIAS 800

Query: 277 GPSYMLAVT--------GNGV--------------------------------------- 289
           G ++   +T        GNG                                        
Sbjct: 801 GSTHCAVLTNSKEVLVFGNGAAMGAASIISIPTLVPSLKYLHIDKLCCGHYSTAAISECG 860

Query: 290 -VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            VY++G+G    LGHG    E  P+ ++  R + I   ++S G  H   L  SG +
Sbjct: 861 DVYTWGTGQE--LGHGNNQTESTPKLVEALRNQSIR--QISCGGRHTAFLTDSGRI 912



 Score = 72.0 bits (175), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 57/216 (26%), Positives = 90/216 (41%), Gaps = 49/216 (22%)

Query: 115 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+  G  HT+ L  N  V++ GSS  G LG G  T  C     +      +V+Q+++   
Sbjct: 745 QVQCGEKHTICLTKNGKVYTWGSSEYGQLGLGDTTRYCKPMP-VTALEKYNVLQIASGST 803

Query: 174 HAAFVLQSGQVFTCGDNSS-----------------------FCCGHRDT---------- 200
           H A +  S +V   G+ ++                        CCGH  T          
Sbjct: 804 HCAVLTNSKEVLVFGNGAAMGAASIISIPTLVPSLKYLHIDKLCCGHYSTAAISECGDVY 863

Query: 201 ------------NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 248
                       N+    P+LVEAL+    +Q++ G   T FLT  G + T G ++ GQL
Sbjct: 864 TWGTGQELGHGNNQTESTPKLVEALRNQSIRQISCGGRHTAFLTDSGRIFTSGKDSFGQL 923

Query: 249 GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
           GH    D+  PK I  L +  + + ++ G +Y +A+
Sbjct: 924 GH-QAGDQNKPKKIESLTKT-TFISVSCGENYNIAL 957



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 47/194 (24%), Positives = 90/194 (46%), Gaps = 16/194 (8%)

Query: 158 NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR-PRLVEALKGV 216
           NF + + +  +S+   ++A + ++G V+  G  S      ++   P+   P++ + L  +
Sbjct: 630 NF-NVSDICSISSGSYYSAALTENGDVYMWGRGSV-----KNPPVPVLGIPQIEDQLLPI 683

Query: 217 PCKQVT------AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 270
             + +T       G   +  +   G + T G    GQLGHGDT ++  PK I  L     
Sbjct: 684 KLESLTDIVVVSIGFYHSAAVRANGELLTWGVGEEGQLGHGDTQNQVEPKVIQSLTSFW- 742

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           + Q+  G  + + +T NG VY++GS     LG G+     +P  +    +   +V+++++
Sbjct: 743 ITQVQCGEKHTICLTKNGKVYTWGSSEYGQLGLGDTTRYCKPMPVTALEK--YNVLQIAS 800

Query: 331 GDEHVVALDSSGYV 344
           G  H   L +S  V
Sbjct: 801 GSTHCAVLTNSKEV 814


>gi|442317911|ref|YP_007357932.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
 gi|441485553|gb|AGC42248.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
          Length = 1451

 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 96/206 (46%), Gaps = 10/206 (4%)

Query: 116 ITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           + +G +H++  +S+ SV++ G +  G LG G  T + +    +  P  + VV VSAS +H
Sbjct: 404 VASGSFHSVAALSDGSVWTWGRNTNGQLGDGTTTERHLP---VRVPGLSGVVSVSASGHH 460

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           +  +   G V+  G N+    G   T +    P  VE L  V  K + +G +    L   
Sbjct: 461 SFALRSDGTVWGWGRNAQGQMGD-GTTKDRASPARVEGLSSV--KALASGGSHMVALRTD 517

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G V T G N  GQLG G T DR  P  +  L  V SV   AAG  + LA+  +G V+++G
Sbjct: 518 GTVWTWGYNGAGQLGDGTTTDRRAPVQVTGLSGVTSV---AAGAYFSLALRTDGTVWAWG 574

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRR 320
            G    LG G       P  +    R
Sbjct: 575 DGFEGQLGDGAGVQRASPVQVTGLTR 600



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 78/252 (30%), Positives = 111/252 (44%), Gaps = 33/252 (13%)

Query: 98  QSVEHSSDIVETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHG-----PETTQC 151
           Q V   SD+V  +AG        +H+L L ++ +V++ GS+  G LG G     P   Q 
Sbjct: 143 QKVPGLSDVVAVAAG-------EFHSLALRADGTVWAWGSNFYGQLGRGHSQPGPSPAQV 195

Query: 152 VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE 211
           V  T         VV ++A  + +  V   G V+  G N S   G   T      P  V 
Sbjct: 196 VGLT--------GVVALAAGFDFSLAVRSDGTVWAWGANGSGQLGD-GTYIQRLAPTQVS 246

Query: 212 ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV 271
            L+GV    VTAGL     L   G V   GSN+ GQ+G G   DRP+P  +  +    +V
Sbjct: 247 QLQGVSA--VTAGLYHALALRSDGTVWAWGSNSSGQMGDGTWTDRPSPVQVTSIARAKAV 304

Query: 272 VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-HVVRVSA 330
               AG   +L    +G V+++G  S   LG G   D   P      R +G+  V  ++A
Sbjct: 305 AAQDAGSLVLLD---DGGVFAWGLNSQGQLGIGTTADSPLP-----VRVRGLGAVTSLAA 356

Query: 331 GDEHVVALDSSG 342
           G +H V L + G
Sbjct: 357 GTQHAVVLRADG 368



 Score = 71.2 bits (173), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 90/199 (45%), Gaps = 10/199 (5%)

Query: 115 QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           +++ GR H+LL+ ++ +V + G +  G LG G  T +       N P A      SA   
Sbjct: 753 RLSAGRAHSLLVRADGTVLAWGQNTSGQLGDGSTTHRASPVLARNLPCAR---AASAGRQ 809

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  +   G V++ G NS    G        + P  VE L GV    V AG + +  L  
Sbjct: 810 HSLVLACDGTVWSWGGNSQGQLGDGGVTSRAY-PAKVEGLWGVVA--VLAGGDSSMVLRA 866

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V T G+N  GQLG G   DR +P  +  L  + + V    G ++ L V+ +G V+++
Sbjct: 867 DGTVWTWGANGSGQLGDGTLGDRASPLEVKGLAGIATGVM---GEAHALVVSQDGTVWAW 923

Query: 294 GSGSNFCLGHGEQHDELQP 312
           G+     LG G       P
Sbjct: 924 GANGRGQLGDGTTTSSASP 942



 Score = 70.9 bits (172), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 58/184 (31%), Positives = 90/184 (48%), Gaps = 11/184 (5%)

Query: 162 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV-PCKQ 220
           A+   +V+A   H+ +V Q+G V+  G N S   G   T    F+  + + + G+     
Sbjct: 47  ASATSKVAAGAQHSLYVTQAGTVWAWGGNGS---GQLGTGSVSFQRVVAQQVPGLTDVTS 103

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           + AG   +  L     V T G N  GQ+G G  +DRPTP+ +  L +   VV +AAG  +
Sbjct: 104 IAAGDAHSLALRADRTVWTWGGNNAGQVGDGTNVDRPTPQKVPGLSD---VVAVAAGEFH 160

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            LA+  +G V+++  GSNF    G  H +  P   Q     G  VV ++AG +  +A+ S
Sbjct: 161 SLALRADGTVWAW--GSNFYGQLGRGHSQPGPSPAQVVGLTG--VVALAAGFDFSLAVRS 216

Query: 341 SGYV 344
            G V
Sbjct: 217 DGTV 220



 Score = 67.8 bits (164), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 61/233 (26%), Positives = 102/233 (43%), Gaps = 15/233 (6%)

Query: 116  ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            +T G +H + +  + +V+  G++  G +G G   T    F  +      + V+ SA E H
Sbjct: 1004 VTAGAHHVVAVRHDGTVWGWGANAFGQVGDG---THFWRFRPVRVEGLLNAVETSAGEQH 1060

Query: 175  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRP---RLVEALKGVPCKQVTAGLNFTGFL 231
            +  +L   +  + G +     G  ++  P   P   +L  +   VP   V+A       L
Sbjct: 1061 SLALLGDERALSWGSHEYGQLGDAESG-PSLEPVGVKLPSSKVLVPAVSVSAWHQHAAAL 1119

Query: 232  TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
               G V T G N  GQLG G T  R TP ++A L   G++V +A    + LA+  +G V+
Sbjct: 1120 LADGTVQTWGGNADGQLGDGTTESRATPITVAGL---GAMVAVAPAARHTLALRSDGTVW 1176

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            ++G  +   LG G       P  +    +    V  ++AG  H +A+   G V
Sbjct: 1177 AWGDNTFGQLGDGSNTRRTLPVQVVGLEK----VTAIAAGSYHSLAVREDGTV 1225



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/222 (27%), Positives = 100/222 (45%), Gaps = 15/222 (6%)

Query: 124 LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 183
           +L+ +  VF+ G +  G LG G   T   S   +       V  ++A   HA  +   G 
Sbjct: 313 VLLDDGGVFAWGLNSQGQLGIG---TTADSPLPVRVRGLGAVTSLAAGTQHAVVLRADGT 369

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           ++T G  ++   GH  + R +  P +V  L  V    V +G   +      G V T G N
Sbjct: 370 LWTWGHGATGQLGHGSSER-MLSPEVVTRLSNVAS--VASGSFHSVAALSDGSVWTWGRN 426

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 303
           T+GQLG G T +R  P  +  L     VV ++A   +  A+  +G V+ +G  +   +G 
Sbjct: 427 TNGQLGDGTTTERHLPVRVPGLS---GVVSVSASGHHSFALRSDGTVWGWGRNAQGQMGD 483

Query: 304 GEQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYV 344
           G   D   P      R +G+  V+ +++G  H+VAL + G V
Sbjct: 484 GTTKDRASP-----ARVEGLSSVKALASGGSHMVALRTDGTV 520



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 58/223 (26%), Positives = 100/223 (44%), Gaps = 13/223 (5%)

Query: 116  ITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHA 175
            +  G    +L ++ +V++ G++  G LG G   T     + +     A +      E HA
Sbjct: 855  LAGGDSSMVLRADGTVWTWGANGSGQLGDG---TLGDRASPLEVKGLAGIATGVMGEAHA 911

Query: 176  AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 235
              V Q G V+  G N     G   T      P  V  L       V+ G  ++  +   G
Sbjct: 912  LVVSQDGTVWAWGANGRGQLGDGTTTSSA-SPVRVAGLS--AAMNVSVGQAYSLAVLPDG 968

Query: 236  HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
             V + G+N  GQLG G  + R TPK   P++++  V  + AG  +++AV  +G V+ +G+
Sbjct: 969  TVWSWGANDSGQLGDGTNVARTTPK---PVQDLADVKAVTAGAHHVVAVRHDGTVWGWGA 1025

Query: 296  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             +   +G G      +P  ++      ++ V  SAG++H +AL
Sbjct: 1026 NAFGQVGDGTHFWRFRPVRVEGL----LNAVETSAGEQHSLAL 1064



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 91/206 (44%), Gaps = 14/206 (6%)

Query: 112  GNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
            G + +  G YH+L++  + ++++ G++  G LG G  T +   F  +       V  V A
Sbjct: 1255 GAVAVAGGEYHSLMLRFDGTLWATGNNSHGQLGEGTFTNRLSPFQVVELD---QVRTVRA 1311

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
               H+  + + G V+T G N     G    T R +  P  V  L  +    V AG + T 
Sbjct: 1312 GGYHSVALREDGTVWTWGHNGQGQLGDGTVTTRRV--PAPVPGLTAIAS--VGAGTSHT- 1366

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
               +       G N+HGQLG GD+ DR  P  +  L  V SV+   AG  + +A   +G 
Sbjct: 1367 -FAVGSETWAWGRNSHGQLGTGDSSDRLEPTLVKGLHGVKSVL---AGGDFSVAQGADGS 1422

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAI 315
              S+G+  +  LG G       P A+
Sbjct: 1423 AMSWGTNVHGTLGIGLPGQRTVPGAV 1448



 Score = 54.3 bits (129), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 57/223 (25%), Positives = 94/223 (42%), Gaps = 14/223 (6%)

Query: 122  HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            HTL L S+ +V++ G +  G LG G  T + +    +       V  ++A   H+  V +
Sbjct: 1165 HTLALRSDGTVWAWGDNTFGQLGDGSNTRRTLPVQVVGLE---KVTAIAAGSYHSLAVRE 1221

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
             G V+  G N     G    +      R++  L G     V  G   +  L   G +   
Sbjct: 1222 DGTVWAWGYNVFGQLGDGTMDARAVPTRML-GLDGAVA--VAGGEYHSLMLRFDGTLWAT 1278

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
            G+N+HGQLG G   +R +P  +  L++V +V    AG  + +A+  +G V+++G      
Sbjct: 1279 GNNSHGQLGEGTFTNRLSPFQVVELDQVRTV---RAGGYHSVALREDGTVWTWGHNGQGQ 1335

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            LG G       P  +         +  V AG  H  A+ S  +
Sbjct: 1336 LGDGTVTTRRVPAPVPGL----TAIASVGAGTSHTFAVGSETW 1374



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 13/225 (5%)

Query: 118 TGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 177
           +G +   L S+ +V+  G +  G +G G  T    S  R+   S+  V  +++  +H   
Sbjct: 457 SGHHSFALRSDGTVWGWGRNAQGQMGDG-TTKDRASPARVEGLSS--VKALASGGSHMVA 513

Query: 178 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
           +   G V+T G N +   G   T      P  V  L GV    V AG  F+  L   G V
Sbjct: 514 LRTDGTVWTWGYNGAGQLGD-GTTTDRRAPVQVTGLSGV--TSVAAGAYFSLALRTDGTV 570

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
              G    GQLG G  + R +P  +  L     VV++AAG ++ LAV  +G V+++G  +
Sbjct: 571 WAWGDGFEGQLGDGAGVQRASPVQVTGLTR---VVKLAAGAAHGLAVRDDGTVWAWGDNT 627

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
              +G G   D    RA+Q +   G+    V  G  H +AL   G
Sbjct: 628 EGQMGDGSWSDRF--RAVQVYGLTGVS--SVVGGLYHSMALAQDG 668



 Score = 47.8 bits (112), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 66/152 (43%), Gaps = 8/152 (5%)

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD- 252
           C G      P   P            +V AG   + ++T  G V   G N  GQLG G  
Sbjct: 26  CEGTSSPAEPSHPPAARSQALASATSKVAAGAQHSLYVTQAGTVWAWGGNGSGQLGTGSV 85

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQP 312
           +  R   + +  L +V S   IAAG ++ LA+  +  V+++G  +   +G G   D   P
Sbjct: 86  SFQRVVAQQVPGLTDVTS---IAAGDAHSLALRADRTVWTWGGNNAGQVGDGTNVDRPTP 142

Query: 313 RAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           + +         VV V+AG+ H +AL + G V
Sbjct: 143 QKVPGLS----DVVAVAAGEFHSLALRADGTV 170



 Score = 44.3 bits (103), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 65/259 (25%), Positives = 101/259 (38%), Gaps = 22/259 (8%)

Query: 87  NGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHG 145
           +G+W    R +Q        V    G   +  G YH++ L  + ++ + G +  G  G G
Sbjct: 633 DGSWSDRFRAVQ--------VYGLTGVSSVVGGLYHSMALAQDGTLRAWGGNAYGQFGDG 684

Query: 146 PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF 205
             T + V+      P  + +  + AS  H   V + G + T G N     G         
Sbjct: 685 GVTPRVVAGA---VPGLSGIKLLGASYLHVLAVREDGMLLTWGYNRFGQLGLGAAGWSSL 741

Query: 206 RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 265
            P  V  L     ++++AG   +  +   G V   G NT GQLG G T  R +P     L
Sbjct: 742 -PVQVRGLG--QGRRLSAGRAHSLLVRADGTVLAWGQNTSGQLGDGSTTHRASPVLARNL 798

Query: 266 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
                    +AG  + L +  +G V+S+G  S   LG G       P  ++        V
Sbjct: 799 P---CARAASAGRQHSLVLACDGTVWSWGGNSQGQLGDGGVTSRAYPAKVEGL----WGV 851

Query: 326 VRVSAGDEHVVALDSSGYV 344
           V V AG +  + L + G V
Sbjct: 852 VAVLAGGDSSMVLRADGTV 870


>gi|291408944|ref|XP_002720770.1| PREDICTED: regulator of chromosome condensation and BTB domain
           containing protein 2 [Oryctolagus cuniculus]
          Length = 551

 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 94/218 (43%), Gaps = 4/218 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  +F  G++  G LG G +    +   R++  S   +  +S  S  H       G+VFT
Sbjct: 64  NDEIFVLGTNCSGCLGLG-DAQSTIEPRRLDSLSGKKIACLSYGSGPHVVLATTEGEVFT 122

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN  +   ++   L      +V  G   +  LT  G V   G N  G
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 182

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T ++P P+ +    +   VV IA G    +AV   G VY +G   N  LG G  
Sbjct: 183 QVGSGPTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSG 242

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            +  QP   +    +GI V RV+ G  H + L   G V
Sbjct: 243 GN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQV 278



 Score = 64.7 bits (156), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 91/185 (49%), Gaps = 8/185 (4%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G YH+L L S+  VF+ G +  G +G GP   Q +            VV ++  +
Sbjct: 155 IEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGPTANQPIPRRVTGCLQNKVVVNIACGQ 214

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCG-HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             +  V+ +G+V+  G N +   G     N+P   P  V AL+G+  ++V  G   T  L
Sbjct: 215 MCSMAVVDTGEVYVWGYNGNGQLGLGSGGNQPT--PCRVAALQGIRVQRVACGYAHTLVL 272

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS--YMLAVTGNGV 289
           T  G V+  G+N++GQLG G+  ++  P  +  + E   +++IAA  S     A T  G 
Sbjct: 273 TDEGQVYAWGANSYGQLGTGNKSNQSYPTPV--VVEKDRIIEIAACHSTHTSAAKTQGGH 330

Query: 290 VYSFG 294
           VY +G
Sbjct: 331 VYMWG 335



 Score = 40.0 bits (92), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 53/116 (45%), Gaps = 3/116 (2%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE-EVGSVVQIAAGPSYMLAVTGNG 288
           + T+   +   G+N  G LG GD      P+ +  L  +  + +   +GP  +LA T  G
Sbjct: 60  YSTVNDEIFVLGTNCSGCLGLGDAQSTIEPRRLDSLSGKKIACLSYGSGPHVVLATT-EG 118

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            V+++G  +   LG+G  +  L P  I T       V+ V+ G  H + L S G V
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLVPCQIST-NLSNKQVIEVACGSYHSLVLTSDGEV 173


>gi|444919547|ref|ZP_21239559.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444708350|gb|ELW49425.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 684

 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 111/237 (46%), Gaps = 18/237 (7%)

Query: 111 AGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G + +  G  H+L + S+ +V++ GS+  G LG G  + +      +     + VV VS
Sbjct: 334 SGGVAVAAGYAHSLAVRSDGTVWAWGSNASGQLGEGTTSNRS---EPVQVQGLSGVVAVS 390

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
           A  + +  +   G V+  G N+S   G   T   +  P  V+ L GV    V AG +F+ 
Sbjct: 391 AGASSSLAIRSDGTVWAWGSNASGQLGDGTTTDRLV-PVQVQGLSGVVA--VVAGTSFS- 446

Query: 230 FLTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
            L +R  G V   G N +GQLG   +L    P  +  L     VV +AAG  + LAV  +
Sbjct: 447 -LAVRNDGTVWGWGYNGYGQLGTFTSLFVLVPVQVTGLS---GVVAVAAGNLHSLAVRSD 502

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G V++ G   N  LG G   +   P  +Q     G  VV V+AGD H +A+   G V
Sbjct: 503 GTVWALGRNDNGQLGDGSWTNRSAP--VQVTGLSG--VVSVAAGDSHSLAVRYDGSV 555



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 72/242 (29%), Positives = 114/242 (47%), Gaps = 23/242 (9%)

Query: 104 SDIVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA 162
           S++V  +AG++       H+L + N  +V++ G +  G LG+G   ++      +     
Sbjct: 36  SEVVAAAAGSI-------HSLALRNDGTVWAWGYNGYGQLGNGSLGSRA---EPVQVQGL 85

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           +  V V A   H+  V   G V+  GDN +   G   T R +  P  V+ L  V    VT
Sbjct: 86  SGGVSVDAGHYHSLAVRDDGTVWAWGDNPNGQLGEGTTTRRLV-PVQVQGLSEVVA--VT 142

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
           AG + +  L   G V   G+N  GQLG G T +R  P  +  L E   VV + AG S+ L
Sbjct: 143 AGSSHSLALRSDGTVWAWGANASGQLGEGTTTNRLVPVPVLGLSE---VVAVEAGSSHSL 199

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           A+  +G V+++G+ ++  LG G     L P  +Q        VV + AG  + +A+ + G
Sbjct: 200 ALRSDGTVWAWGANASGQLGDGTTTKRLVP--VQVLS----GVVAMEAGSGYSLAVRNDG 253

Query: 343 YV 344
            V
Sbjct: 254 TV 255



 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 69/239 (28%), Positives = 107/239 (44%), Gaps = 14/239 (5%)

Query: 107 VETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV 165
           V+  +G + +  G  ++L + N  +V++ G +  G LG    T++    T +     + V
Sbjct: 230 VQVLSGVVAMEAGSGYSLAVRNDGTVWAWGYNFSGQLGDDTVTSRS---TPVQVLGLSEV 286

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
           V V+A  + +  +   G V+  G N     G   T+   F P     L G     V AG 
Sbjct: 287 VAVAAGSSLSLALRSDGTVWAWGSNDYGQRGEGTTSNRAF-PVQARGLSG--GVAVAAGY 343

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
             +  +   G V   GSN  GQLG G T +R  P  +  L     VV ++AG S  LA+ 
Sbjct: 344 AHSLAVRSDGTVWAWGSNASGQLGEGTTSNRSEPVQVQGLS---GVVAVSAGASSSLAIR 400

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            +G V+++GS ++  LG G   D L P  +Q        VV V AG    +A+ + G V
Sbjct: 401 SDGTVWAWGSNASGQLGDGTTTDRLVPVQVQGLS----GVVAVVAGTSFSLAVRNDGTV 455



 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 73/241 (30%), Positives = 102/241 (42%), Gaps = 17/241 (7%)

Query: 107 VETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV 165
           V+  +G + +  G   +L + N  +V+  G +  G LG     T       +     + V
Sbjct: 430 VQGLSGVVAVVAGTSFSLAVRNDGTVWGWGYNGYGQLG---TFTSLFVLVPVQVTGLSGV 486

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAG 224
           V V+A   H+  V   G V+  G N +   G    TNR    P  V  L GV    V AG
Sbjct: 487 VAVAAGNLHSLAVRSDGTVWALGRNDNGQLGDGSWTNRSA--PVQVTGLSGVVS--VAAG 542

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
            + +  +   G V   G N+ GQLG G    R  P  +  L   GSV   AA   Y +AV
Sbjct: 543 DSHSLAVRYDGSVWAWGYNSFGQLGDGSWFQRSAPVQVTGLSGRGSV---AASSDYSMAV 599

Query: 285 TGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
             +G V+++G      LG G    ++L P  +Q  R     VV V  G  H +AL S G 
Sbjct: 600 RYDGTVWAWGFNLYGQLGDGTTSSNQLVPVQVQQLR----GVVAVEVGSSHSLALRSDGT 655

Query: 344 V 344
           V
Sbjct: 656 V 656



 Score = 60.8 bits (146), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 69/239 (28%), Positives = 106/239 (44%), Gaps = 14/239 (5%)

Query: 107 VETSAGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV 165
           V+  +G + ++ G   +L I S+ +V++ GS+  G LG G  T + V    +     + V
Sbjct: 380 VQGLSGVVAVSAGASSSLAIRSDGTVWAWGSNASGQLGDGTTTDRLVP---VQVQGLSGV 436

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
           V V A  + +  V   G V+  G N     G   T+  +  P  V  L GV    V AG 
Sbjct: 437 VAVVAGTSFSLAVRNDGTVWGWGYNGYGQLGTF-TSLFVLVPVQVTGLSGVVA--VAAGN 493

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
             +  +   G V   G N +GQLG G   +R  P  +  L     VV +AAG S+ LAV 
Sbjct: 494 LHSLAVRSDGTVWALGRNDNGQLGDGSWTNRSAPVQVTGLS---GVVSVAAGDSHSLAVR 550

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            +G V+++G  S   LG G       P  +     +G     V+A  ++ +A+   G V
Sbjct: 551 YDGSVWAWGYNSFGQLGDGSWFQRSAPVQVTGLSGRG----SVAASSDYSMAVRYDGTV 605



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 37/110 (33%), Positives = 51/110 (46%), Gaps = 7/110 (6%)

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G V   G+N  GQLG G   +R TP  +  L E   VV  AAG  + LA+  +G V+++G
Sbjct: 5   GTVWAAGNNGSGQLGDGTRDNRSTPVQVLGLSE---VVAAAAGSIHSLALRNDGTVWAWG 61

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
                 LG+G      +P  +Q         V V AG  H +A+   G V
Sbjct: 62  YNGYGQLGNGSLGSRAEPVQVQGLSGG----VSVDAGHYHSLAVRDDGTV 107



 Score = 38.9 bits (89), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 69/147 (46%), Gaps = 10/147 (6%)

Query: 111 AGNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGP--ETTQCVSFTRINFPSAAHVVQ 167
           +G + +  G  H+L +  + SV++ G +  G LG G   + +  V  T ++   +     
Sbjct: 534 SGVVSVAAGDSHSLAVRYDGSVWAWGYNSFGQLGDGSWFQRSAPVQVTGLSGRGS----- 588

Query: 168 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
           V+AS +++  V   G V+  G N     G   T+     P  V+ L+GV   +V  G + 
Sbjct: 589 VAASSDYSMAVRYDGTVWAWGFNLYGQLGDGTTSSNQLVPVQVQQLRGVVAVEV--GSSH 646

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTL 254
           +  L   G V T G N+ GQLG+G  L
Sbjct: 647 SLALRSDGTVWTWGYNSFGQLGNGPPL 673


>gi|440801856|gb|ELR22860.1| regulator of chromosome condensation (RCC1) repeat domain containing
            protein [Acanthamoeba castellanii str. Neff]
          Length = 2111

 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 70/241 (29%), Positives = 111/241 (46%), Gaps = 25/241 (10%)

Query: 114  MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            + ++ G  HTLL++++  +FS GS   G LGHG  T    +  ++   S   VV  SA E
Sbjct: 1293 VDVSCGGAHTLLVTSTGGLFSFGSGEAGALGHGFFTGDIRAPKQVMALSDVPVVAASAGE 1352

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR---PRLVEA-LKGVPCKQVTAGLNFT 228
              +  +   G +F+ G       GH+      +R   PR VE  L  V   ++ AG + +
Sbjct: 1353 YFSLVLAADGAIFSFGRGDKGQLGHQKLKLTGYRSLTPRRVEGDLLNVKVARIAAGHDHS 1412

Query: 229  GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE----------------EVGS-- 270
              +T  G ++  GSN H +LG       P PK + P +                 VG+  
Sbjct: 1413 MAVTDNGELYLWGSNEHRKLGFRKKAAFPLPKQMKPKKFAAATPVVGEEGLHAPPVGAPR 1472

Query: 271  -VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
             V  IAAG S+ +AV     V+++GS +   LGHG++    +P  ++     G  V++VS
Sbjct: 1473 HVTHIAAGYSHSIAVVDEHNVFTWGSAAWAQLGHGDERQCKRPSLVKLLSGMG-RVLQVS 1531

Query: 330  A 330
            A
Sbjct: 1532 A 1532



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 61/190 (32%), Positives = 82/190 (43%), Gaps = 15/190 (7%)

Query: 124  LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS-----AAH-VVQVSASENHAAF 177
            +L     VF  GS+L      G   T  +S    N P+     A H VV VS    H   
Sbjct: 1248 VLTREGRVFLWGSALTSSRDFG---TMDLSMPDPNTPALLRSMARHCVVDVSCGGAHTLL 1304

Query: 178  VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
            V  +G +F+ G   +   GH      I  P+ V AL  VP    +AG  F+  L   G +
Sbjct: 1305 VTSTGGLFSFGSGEAGALGHGFFTGDIRAPKQVMALSDVPVVAASAGEYFSLVLAADGAI 1364

Query: 238  HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-----SVVQIAAGPSYMLAVTGNGVVYS 292
             + G    GQLGH   L     +S+ P    G      V +IAAG  + +AVT NG +Y 
Sbjct: 1365 FSFGRGDKGQLGH-QKLKLTGYRSLTPRRVEGDLLNVKVARIAAGHDHSMAVTDNGELYL 1423

Query: 293  FGSGSNFCLG 302
            +GS  +  LG
Sbjct: 1424 WGSNEHRKLG 1433



 Score = 45.4 bits (106), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 51/207 (24%), Positives = 83/207 (40%), Gaps = 29/207 (14%)

Query: 165  VVQVSASENHAAFVLQSGQVFTCGDNSS-----------------------FCCGHRDTN 201
            +  V+ S +HA F  +SG+V+  GD ++                          G   T 
Sbjct: 1160 ITSVACSSSHALFTTRSGKVYMLGDKATGQINASSSVPPPPPPPPPLPCGLLLTGAGSTG 1219

Query: 202  RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT-LDRPTPK 260
                  + V+ L+     +   G+  +  LT  G V   GS        G   L  P P 
Sbjct: 1220 ATQLHAQPVQGLENHVAVKAACGIGSSLVLTREGRVFLWGSALTSSRDFGTMDLSMPDPN 1279

Query: 261  SIAPLEEVGS--VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQT 317
            + A L  +    VV ++ G ++ L VT  G ++SFGSG    LGHG    +++ P+ +  
Sbjct: 1280 TPALLRSMARHCVVDVSCGGAHTLLVTSTGGLFSFGSGEAGALGHGFFTGDIRAPKQVMA 1339

Query: 318  FRRKGIHVVRVSAGDEHVVALDSSGYV 344
                 + VV  SAG+   + L + G +
Sbjct: 1340 L--SDVPVVAASAGEYFSLVLAADGAI 1364


>gi|74002225|ref|XP_851549.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Canis lupus
           familiaris]
          Length = 1015

 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 74/240 (30%), Positives = 110/240 (45%), Gaps = 19/240 (7%)

Query: 115 QITTGRYHTLLI-SNSSVFSCGSSLCGVLGH--GPETTQCVSFTRINFPSAAHVVQVSAS 171
           Q  +G  H+LL+ SN  V SCG +  G LG    P + Q     RI      HV  VS  
Sbjct: 27  QAASGERHSLLLLSNGQVHSCGDNGRGQLGQRGAPCSAQ---LKRIRALETLHVDLVSCG 83

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           + H+  V   G+VF  G  S    G  +       P  ++ L  +  KQV+ G   +  L
Sbjct: 84  KEHSLAVCHKGRVFAWGAGSEGQLGTGEFKETNLIPMKIKTLNDIKIKQVSCGHYHSLAL 143

Query: 232 TIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           +  G V + GSN+ GQLG G     + +P+ +  L+ +  + Q+AAG ++  A++ +G  
Sbjct: 144 SEGGQVFSWGSNSDGQLGLGKKFPSQASPQRVRSLDGI-PLAQVAAGGAHSFALSLSGT- 201

Query: 291 YSFGSGSNFCLGHGEQHDE------LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            SFG G N   G    H         +P +I   +  G  V+ +S G EH V L  +G V
Sbjct: 202 -SFGWGRNNA-GQLALHKNNVSGQSYKPYSISALKNLG--VIYISCGYEHTVVLTQNGKV 257



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/184 (32%), Positives = 89/184 (48%), Gaps = 6/184 (3%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q++ G YH+L +S    VFS GS+  G LG G +     S  R+       + QV+A   
Sbjct: 132 QVSCGHYHSLALSEGGQVFSWGSNSDGQLGLGKKFPSQASPQRVRSLDGIPLAQVAAGGA 191

Query: 174 HAAFVLQSGQVFTCGDNSS--FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           H+  +  SG  F  G N++        + +   ++P  + ALK +    ++ G   T  L
Sbjct: 192 HSFALSLSGTSFGWGRNNAGQLALHKNNVSGQSYKPYSISALKNLGVIYISCGYEHTVVL 251

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA-VTGNGVV 290
           T  G V T G NT+GQLGH  T ++  P+ +  ++  G V QI  G  + LA V   G V
Sbjct: 252 TQNGKVFTFGDNTYGQLGHSPTAEKSGPQLVEGID--GLVSQIDCGSYHTLAYVYTTGKV 309

Query: 291 YSFG 294
            SFG
Sbjct: 310 VSFG 313



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/228 (28%), Positives = 108/228 (47%), Gaps = 12/228 (5%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           ++ G+ H+L + +   VF+ G+   G LG G      +   +I   +   + QVS    H
Sbjct: 80  VSCGKEHSLAVCHKGRVFAWGAGSEGQLGTGEFKETNLIPMKIKTLNDIKIKQVSCGHYH 139

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           +  + + GQVF+ G NS    G          P+ V +L G+P  QV AG   +  L++ 
Sbjct: 140 SLALSEGGQVFSWGSNSDGQLGLGKKFPSQASPQRVRSLDGIPLAQVAAGGAHSFALSLS 199

Query: 235 GHVHTCGSNTHGQLG-HGDTLDRPT--PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           G     G N  GQL  H + +   +  P SI+ L+ +G V+ I+ G  + + +T NG V+
Sbjct: 200 GTSFGWGRNNAGQLALHKNNVSGQSYKPYSISALKNLG-VIYISCGYEHTVVLTQNGKVF 258

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH--VVRVSAGDEHVVA 337
           +FG  +   LGH    ++  P+ ++     GI   V ++  G  H +A
Sbjct: 259 TFGDNTYGQLGHSPTAEKSGPQLVE-----GIDGLVSQIDCGSYHTLA 301



 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 50/143 (34%), Positives = 69/143 (48%), Gaps = 6/143 (4%)

Query: 203 PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           P+ R R+   L GV  +Q  +G   +  L   G VH+CG N  GQLG          K I
Sbjct: 12  PVSRRRV--GLGGVELRQAASGERHSLLLLSNGQVHSCGDNGRGQLGQRGAPCSAQLKRI 69

Query: 263 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRK 321
             LE +  V  ++ G  + LAV   G V+++G+GS   LG GE +   L P  I+T    
Sbjct: 70  RALETL-HVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGTGEFKETNLIPMKIKTLN-- 126

Query: 322 GIHVVRVSAGDEHVVALDSSGYV 344
            I + +VS G  H +AL   G V
Sbjct: 127 DIKIKQVSCGHYHSLALSEGGQV 149


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.321    0.135    0.408 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,393,935,869
Number of Sequences: 23463169
Number of extensions: 218836322
Number of successful extensions: 532031
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2565
Number of HSP's successfully gapped in prelim test: 2247
Number of HSP's that attempted gapping in prelim test: 483217
Number of HSP's gapped (non-prelim): 21821
length of query: 348
length of database: 8,064,228,071
effective HSP length: 143
effective length of query: 205
effective length of database: 9,003,962,200
effective search space: 1845812251000
effective search space used: 1845812251000
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 77 (34.3 bits)