BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018985
(348 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q15751|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1 OS=Homo sapiens GN=HERC1
PE=1 SV=2
Length = 4861
Score = 100 bits (250), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 124/235 (52%), Gaps = 13/235 (5%)
Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
I G+Y T +IS + SV +CG G LG G Q + ++ F + +VS+S
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466
Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
+ H G+VF+ GD GH +++ + P+L++ L+G V+AG +
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525
Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
+T G ++T G G+LGHGD+ R P + + VG +++ G S+ +A++ +G
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582
Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
V+SFG G N LGHG+ + +P+ I+ +G+ + +V AG + +AL S+G V
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEAL--QGMFIRKVCAGSQSSLALTSTGQV 635
Score = 95.1 bits (235), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 124/237 (52%), Gaps = 14/237 (5%)
Query: 115 QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
Q+ G+ T +I +N +V +CG G LG G V T I+ V Q+
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4089
Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
S+ H+ + +SG+VF+ GD GH +++R RPR +EAL+G Q++ G +
Sbjct: 4090 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4148
Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
+T G + T G+ +G+LG G+T ++ P+ + LE ++G Q+A G ++ LAV+ +G
Sbjct: 4149 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4205
Query: 289 -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
+V++FG G LG G + P+ I GI + +V+ G + VAL G+V
Sbjct: 4206 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL--CGIGIKKVACGTQFSVALTKDGHV 4260
Score = 85.5 bits (210), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 110/225 (48%), Gaps = 7/225 (3%)
Query: 122 HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
H++ ++ S VFS G G LGHG Q +I VVQ+S H+A V
Sbjct: 4093 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTS 4151
Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VHT 239
G++FT G+ G +T+ P V AL+G QV GLN T ++ G V
Sbjct: 4152 DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 4210
Query: 240 CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
G +G+LG G++ + +P+ I L +G + ++A G + +A+T +G VY+FG
Sbjct: 4211 FGDGDYGKLGLGNSTAKSSPQKIDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQDRLI 4269
Query: 300 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
L G + +P+ I G+ + V+ G EH +AL S+G V
Sbjct: 4270 GLPEGRARNHNRPQQIPVL--AGVIIEDVAVGAEHTLALASNGDV 4312
Score = 84.7 bits (208), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 80/222 (36%), Positives = 113/222 (50%), Gaps = 15/222 (6%)
Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
HTL + VFS G G LGHG +TQ I P VV VSA H+A V
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527
Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
+ G+++T G+ GH D+N R I P LV+ + V +V+ G + T L+ G V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583
Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
+ G +G+LGHGDT PK I L+ + + ++ AG LA+T G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642
Query: 298 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
CLG G + L+P+ I+ +V VS GD H +AL
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLAL 680
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 110/234 (47%), Gaps = 38/234 (16%)
Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS----AAHVVQVSASENHA 175
R+ + + +++ G G LGHG ++ N P+ ++V +VS +H
Sbjct: 521 RHSAAVTEDGELYTWGEGDFGRLGHGDSNSR-------NIPTLVKDISNVGEVSCGSSHT 573
Query: 176 AFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
+ + G+ F GDN GH DTNR +++P+++EAL+G+ ++V AG + LT
Sbjct: 574 IALSKDGRTVWSFGGGDNGKL--GHGDTNR-VYKPKVIEALQGMFIRKVCAGSQSSLALT 630
Query: 233 IRGHVHT--------CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
G V+ CGS+ L PK I L +V ++ G S+ LA+
Sbjct: 631 STGQVYAWGCGACLGCGSSEATAL---------RPKLIEELAAT-RIVDVSIGDSHCLAL 680
Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVA 337
+ + VY++G+ S G G + +P+ + GI + ++SAG H +A
Sbjct: 681 SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGL--DGIAIQQISAGTSHSLA 732
Score = 65.1 bits (157), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 13/229 (5%)
Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
+Q++ G H+ ++ S+ +F+ G+ G LG G + + + R+ + QV+
Sbjct: 4137 VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 4195
Query: 173 NHAAFVLQSGQV---FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
NH V G + F GD G+ P+ ++ L G+ K+V G F+
Sbjct: 4196 NHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS---SPQKIDVLCGIGIKKVACGTQFSV 4252
Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNG 288
LT GHV+T G + L G + P+ I L G +++ +A G + LA+ NG
Sbjct: 4253 ALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVL--AGVIIEDVAVGAEHTLALASNG 4310
Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
VY++GS S LG G + +P + +G +V ++SAG H A
Sbjct: 4311 DVYAWGSNSEGQLGLGHTNHVREPTLVTGL--QGKNVRQISAGRCHSAA 4357
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 84/189 (44%), Gaps = 14/189 (7%)
Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
PS + + A + + G V CG S G D+N + F P ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457
Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
K V + + G T T G V + G +G+LGHG++ + PK I + VV
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515
Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
++AG + AVT +G +Y++G G LGHG+ + R I T + +V VS G
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571
Query: 334 HVVALDSSG 342
H +AL G
Sbjct: 572 HTIALSKDG 580
Score = 59.3 bits (142), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 84/175 (48%), Gaps = 7/175 (4%)
Query: 115 QITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
+++ G HT+ +S +V+S G G LGHG +T + I + +V A
Sbjct: 565 EVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEALQGMFIRKVCAGS 623
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
+ + +GQV+ G + CG + RP+L+E L V+ G + L+
Sbjct: 624 QSSLALTSTGQVYAWGCGACLGCGSSEAT--ALRPKLIEELAATRIVDVSIGDSHCLALS 681
Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
V+ G+N+ GQ G G++ T PK ++ L+ + ++ QI+AG S+ LA T
Sbjct: 682 HDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI-AIQQISAGTSHSLAWTA 735
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 65/128 (50%), Gaps = 4/128 (3%)
Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 276
+QV G N T + G V CG ++G+LG G++ D I+ L+ V +V
Sbjct: 4030 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4089
Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
+ +A+T +G V+S+G G LGHG + +PR I+ +G VV++S G +H
Sbjct: 4090 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSA 4147
Query: 337 ALDSSGYV 344
+ S G +
Sbjct: 4148 VVTSDGKL 4155
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 79/180 (43%), Gaps = 11/180 (6%)
Query: 115 QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
Q+ G HTL +S S V++ G G LG G T + S +I+ + +V+
Sbjct: 4190 QVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKIDVLCGIGIKKVACGT 4248
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
+ + + G V+T G + R+ NRP + + L GV + V G T
Sbjct: 4249 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP----QQIPVLAGVIIEDVAVGAEHTL 4304
Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
L G V+ GSN+ GQLG G T P + L+ +V QI+AG + A T V
Sbjct: 4305 ALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQG-KNVRQISAGRCHSAAWTAPPV 4363
>sp|Q15034|HERC3_HUMAN Probable E3 ubiquitin-protein ligase HERC3 OS=Homo sapiens GN=HERC3
PE=1 SV=1
Length = 1050
Score = 92.4 bits (228), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 109/225 (48%), Gaps = 7/225 (3%)
Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
G + L+ + V++CG + G LGH E + +I + H++ V+ E+H+ +
Sbjct: 43 GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 99
Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
GQ+F+ G S G T + PRL++ L QV+ G L G
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159
Query: 239 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
T G N+HGQLG G + +P+ + LE + + Q+AAG ++ A++ +G V+ +G +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218
Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
LG ++ D P ++ R + VV +S G+EH L SG
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSG 261
Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 113/234 (48%), Gaps = 7/234 (2%)
Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
+ + G H+L +S+ +FS G+ G LG T V+ R I + ++QVS
Sbjct: 87 IHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145
Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
H + GQ FT G NS G P+ V +L+G+P QV AG + L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205
Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
++ G V G N GQLG D DR +P + L VV I+ G + +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264
Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYV 344
+FG+GS LGH +DE+ PR + G V +++ G +H +A + SSG +
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLI 316
Score = 75.9 bits (185), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 101/189 (53%), Gaps = 10/189 (5%)
Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
F S V +V+ NH+ F+L+ G+V+TCG N+ GH R+ N +P + AL
Sbjct: 30 FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN----KPEQIGALADQH 85
Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
V G + + L+ RG + + G+ + GQLG T D P+ I L + +++Q++
Sbjct: 86 IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144
Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
G + LA+ +G +++G S+ LG G++ + P+ +++ +GI + +V+AG H
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 202
Query: 336 VALDSSGYV 344
AL SG V
Sbjct: 203 FALSLSGAV 211
Score = 72.4 bits (176), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 95/194 (48%), Gaps = 6/194 (3%)
Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
+Q++ G +H L L ++ F+ G + G LG G E S R+ + QV+A
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGG 199
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
H+ + SG VF G N++ G D + P V+ L+ ++ G T LT
Sbjct: 200 AHSFALSLSGAVFGWGMNNAGQLGLSD-EKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGNGVV 290
G V T G+ + GQLGH D P+ + LE +GS V QIA G + LA V +G++
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLI 316
Query: 291 YSFGSGSNFCLGHG 304
Y+FG G+ LG G
Sbjct: 317 YAFGCGARGQLGTG 330
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 83/165 (50%), Gaps = 25/165 (15%)
Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
C G+ +P + P++ + K+V G N + FL G V+TCG N
Sbjct: 2 LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61
Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
T GQLGH ++P E++G+ ++ +A G S+ LA++ G ++S+G+GS+
Sbjct: 62 TKGQLGHEREGNKP--------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD 113
Query: 299 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
LG D + PR IQ ++ I ++VS G+ H +AL + G
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADG 156
>sp|Q9UII4|HERC5_HUMAN E3 ISG15--protein ligase HERC5 OS=Homo sapiens GN=HERC5 PE=1 SV=2
Length = 1024
Score = 91.7 bits (226), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 105/208 (50%), Gaps = 10/208 (4%)
Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
+QIT G YH+L +S +F+ G +L G LG G + + + + + Q+SA E
Sbjct: 141 IQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGE 200
Query: 173 NHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
H+ + SG +++ G N GH ++ P L+E L + V G + +
Sbjct: 201 AHSMALSMSGNIYSWGKNECGQLGLGHTESKDD---PSLIEGLDNQKVEFVACGGSHSAL 257
Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLA-VTGNG 288
LT G + T G+ HGQLGH T + P +A L VG V QIA G + LA V+ G
Sbjct: 258 LTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAEL--VGYRVTQIACGRWHTLAYVSDLG 315
Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
V+SFGSG + LG+G D+L P ++
Sbjct: 316 KVFSFGSGKDGQLGNGGTRDQLMPLPVK 343
Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 90/173 (52%), Gaps = 3/173 (1%)
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
++Q++ + H+ + + G++F G N G P++VE L GVP Q++AG
Sbjct: 140 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAG 199
Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
+ L++ G++++ G N GQLG G T + P I L+ V +A G S+ +
Sbjct: 200 EAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDN-QKVEFVACGGSHSALL 258
Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
T +G++++FG+G + LGH +EL+P + G V +++ G H +A
Sbjct: 259 TQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELV--GYRVTQIACGRWHTLA 309
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 61/131 (46%), Gaps = 14/131 (10%)
Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP--LEEVGSV--VQIA 275
Q+T G + L+ G + G N HGQLG G R P + P +E + V QI+
Sbjct: 142 QITCGDYHSLALSKGGELFAWGQNLHGQLGVG----RKFPSTTTPQIVEHLAGVPLAQIS 197
Query: 276 AGPSYMLAVTGNGVVYSFGSGS--NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
AG ++ +A++ +G +YS+G LGH E D+ P I+ + + V+ G
Sbjct: 198 AGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDD--PSLIEGLDNQKVEF--VACGGS 253
Query: 334 HVVALDSSGYV 344
H L G +
Sbjct: 254 HSALLTQDGLL 264
>sp|Q9VR91|HERC2_DROME Probable E3 ubiquitin-protein ligase HERC2 OS=Drosophila melanogaster
GN=HERC2 PE=1 SV=3
Length = 4912
Score = 91.3 bits (225), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 76/229 (33%), Positives = 108/229 (47%), Gaps = 9/229 (3%)
Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAF 177
G++ L + VFS G G LGHG TT + R + A + V+ +H+A
Sbjct: 3082 GKHALALTLDGKVFSWGEGEDGKLGHGNRTT--LDKPRLVEALRAKKIRDVACGSSHSAA 3139
Query: 178 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRG 235
+ G+++T G GH D N +P+LV AL G QV G T LT G
Sbjct: 3140 ISSQGELYTWGLGEYGRLGHGD-NTTQLKPKLVTALAGRRVVQVACGSRDAQTLALTEDG 3198
Query: 236 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
V + G G+LG G + TP I L +G VVQI G + LA+T G V+++G
Sbjct: 3199 AVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIG-VVQIECGAQFSLALTRAGEVWTWGK 3257
Query: 296 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
G + LGHG +P+ I R G V+ V+ G H +A+ +G V
Sbjct: 3258 GDYYRLGHGGDQHVRKPQPIGGLR--GRRVIHVAVGALHCLAVTDAGQV 3304
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 113/238 (47%), Gaps = 14/238 (5%)
Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VS 169
+ I G ++S + V++CG G LG G T V +VV+ V
Sbjct: 3022 IHIAGGSKSLFIVSQDGKVYACGEGTNGRLGLG--VTHNVPLPHQLPVLRQYVVKKVAVH 3079
Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFT 228
+ HA + G+VF+ G+ GH NR +PRLVEAL+ + V G + +
Sbjct: 3080 SGGKHALALTLDGKVFSWGEGEDGKLGH--GNRTTLDKPRLVEALRAKKIRDVACGSSHS 3137
Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG--PSYMLAVTG 286
++ +G ++T G +G+LGHGD + PK + L VVQ+A G + LA+T
Sbjct: 3138 AAISSQGELYTWGLGEYGRLGHGDNTTQLKPKLVTALAGR-RVVQVACGSRDAQTLALTE 3196
Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
+G V+S+G G LG G P I+ R GI VV++ G + +AL +G V
Sbjct: 3197 DGAVFSWGDGDFGKLGRGGSEGSDTPHEIE--RLSGIGVVQIECGAQFSLALTRAGEV 3252
Score = 78.2 bits (191), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 88/181 (48%), Gaps = 6/181 (3%)
Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAG 224
V V++ H + G+V+ G+ GH NR + RP+LVE L G+ + G
Sbjct: 4139 VAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH--GNRMSYDRPKLVEHLNGMSVADIACG 4196
Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLA 283
+ +T GHV T G +G+LGHGD+ D+ PK + L ++ + +G + L
Sbjct: 4197 SAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLC 4256
Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
+T + V+S+G G LG G P I++ G+ VV+V G + VAL SG
Sbjct: 4257 ITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESL--AGLGVVKVECGSQFSVALTKSGA 4314
Query: 344 V 344
V
Sbjct: 4315 V 4315
Score = 68.9 bits (167), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 86/163 (52%), Gaps = 8/163 (4%)
Query: 184 VFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
++ G GH DT+ R + P + AL+ + V G +++ +T G++ T G
Sbjct: 637 AYSWGTGEDHRLGHGDTHARAV--PTKIAALEQHCVQSVYCGCSYSAAITCGGNLLTWGR 694
Query: 243 NTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 301
T+ +LGHG++ DR P + L + V V + +G ++ LA+T G+V+++G G L
Sbjct: 695 GTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKL 754
Query: 302 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
G+G + LQP +++ R V RV AG + VAL S G +
Sbjct: 755 GNGNCNGSLQPILVESLPR----VQRVFAGSQFSVALSSEGQL 793
Score = 68.9 bits (167), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 113/287 (39%), Gaps = 66/287 (22%)
Query: 113 NMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQV 168
+ + +G H L L + V++ G G LGHG +S+ R + + V +
Sbjct: 4138 KVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNR----MSYDRPKLVEHLNGMSVADI 4193
Query: 169 SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG------------- 215
+ H+A + SG V T G GH D+ + RP+LVEAL G
Sbjct: 4194 ACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQL-RPKLVEALLGYRAIDIACGSGDA 4252
Query: 216 -------------------------------VPCK----------QVTAGLNFTGFLTIR 234
+P K +V G F+ LT
Sbjct: 4253 QTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKS 4312
Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
G V+T G +LGHG PK +A L+ ++ IA G + +A + +G VY++G
Sbjct: 4313 GAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQG-KKIISIATGSLHCVACSDSGEVYTWG 4371
Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
LG G +PR + +G H+V+V+ G H +AL +S
Sbjct: 4372 DNDEGQLGDGTVTAIQRPRLVAAL--QGKHIVKVTCGSAHTLALSTS 4416
Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 97/225 (43%), Gaps = 8/225 (3%)
Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
+ G H+ IS+ +++ G G LGHG TTQ + + + VVQV+
Sbjct: 3130 VACGSSHSAAISSQGELYTWGLGEYGRLGHGDNTTQ-LKPKLVTALAGRRVVQVACGSRD 3188
Query: 175 AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
A + + G VF+ GD G R + P +E L G+ Q+ G F+ LT
Sbjct: 3189 AQTLALTEDGAVFSWGDGDFGKLG-RGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALT 3247
Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
G V T G + +LGHG P+ I L V+ +A G + LAVT G VY+
Sbjct: 3248 RAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGR-RVIHVAVGALHCLAVTDAGQVYA 3306
Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
+G + G G +P + + V RV+ G H +A
Sbjct: 3307 WGDNDHGQQGSGNTFVNKKPALVIGL--DAVFVNRVACGSSHSIA 3349
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 57/117 (48%), Gaps = 3/117 (2%)
Query: 230 FLTIRGH--VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
FL I + ++ G+ +LGHGDT R P IA LE+ V + G SY A+T
Sbjct: 628 FLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQ-HCVQSVYCGCSYSAAITCG 686
Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
G + ++G G+ LGHG D P + + V + +GD H +AL S G V
Sbjct: 687 GNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLV 743
Score = 35.8 bits (81), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 61/124 (49%), Gaps = 11/124 (8%)
Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSY 280
L++ G TI G G N GQLG G + PTP ++++ L V Q+A G
Sbjct: 4042 ALSWGGASTIYG----WGHNHRGQLGGLEGSRIKTPTPCEALSLLRPV----QLAGGEQS 4093
Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
+ AVT +G +++ G GS LG G P + + + + V V++G +H +AL +
Sbjct: 4094 LFAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTT 4153
Query: 341 SGYV 344
G V
Sbjct: 4154 EGEV 4157
>sp|Q9FN03|UVR8_ARATH Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana GN=UVR8 PE=1
SV=1
Length = 440
Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 115/229 (50%), Gaps = 7/229 (3%)
Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
I+ G H++ L+S V S G G LGHG + S T+++ +V V+ +H
Sbjct: 20 ISAGASHSVALLSGDIVCSWGRGEDGQLGHG-DAEDRPSPTQLSALDGHQIVSVTCGADH 78
Query: 175 AAFVLQSG-QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
QSG +V++ G GH +++ +F P ++AL G+ KQ+ G + +T+
Sbjct: 79 TVAYSQSGMEVYSWGWGDFGRLGHGNSSD-LFTPLPIKALHGIRIKQIACGDSHCLAVTM 137
Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
G V + G N +GQLG GDT D P+ I E + + +AAG + AVT +G +Y +
Sbjct: 138 EGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGI-RIKMVAAGAEHTAAVTEDGDLYGW 196
Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
G G LG G++ D L P + + G + V+ G H +++ SG
Sbjct: 197 GWGRYGNLGLGDRTDRLVPERVTS--TGGEKMSMVACGWRHTISVSYSG 243
Score = 81.6 bits (200), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/180 (36%), Positives = 90/180 (50%), Gaps = 7/180 (3%)
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTA 223
V+ +SA +H+ +L V + G GH D +RP P + AL G VT
Sbjct: 17 VLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRP--SPTQLSALDGHQIVSVTC 74
Query: 224 GLNFTGFLTIRG-HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
G + T + G V++ G G+LGHG++ D TP I L + + QIA G S+ L
Sbjct: 75 GADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGI-RIKQIACGDSHCL 133
Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
AVT G V S+G N LG G+ D L P+ IQ F +GI + V+AG EH A+ G
Sbjct: 134 AVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAF--EGIRIKMVAAGAEHTAAVTEDG 191
Score = 75.1 bits (183), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 96/209 (45%), Gaps = 6/209 (2%)
Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
+ G HT ++ + ++ G G LG G T + V R+ + V+ H
Sbjct: 177 VAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVP-ERVTSTGGEKMSMVACGWRH 235
Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
V SG ++T G + GH D + P +EAL Q++ G T LT
Sbjct: 236 TISVSYSGALYTYGWSKYGQLGHGDLEDHLI-PHKLEALSNSFISQISGGWRHTMALTSD 294
Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
G ++ G N GQ+G G+ LD+ +P + P ++ VVQ++ G + LAVT V+++
Sbjct: 295 GKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQ--KVVQVSCGWRHTLAVTERNNVFAW 352
Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
G G+N LG GE D P+ I+ G
Sbjct: 353 GRGTNGQLGIGESVDRNFPKIIEALSVDG 381
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 76/162 (46%), Gaps = 9/162 (5%)
Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
+ G HT+ +S S ++++ G S G LGHG + ++ S + + Q+S H
Sbjct: 229 VACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPH-KLEALSNSFISQISGGWRH 287
Query: 175 AAFVLQSGQVFTCGDNSSFCCG---HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
+ G+++ G N G + D P+ + R + K V QV+ G T +
Sbjct: 288 TMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPV-QVRFPDDQKVV---QVSCGWRHTLAV 343
Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
T R +V G T+GQLG G+++DR PK I L G+ Q
Sbjct: 344 TERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALSVDGASGQ 385
>sp|O95714|HERC2_HUMAN E3 ubiquitin-protein ligase HERC2 OS=Homo sapiens GN=HERC2 PE=1 SV=2
Length = 4834
Score = 89.4 bits (220), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 107/228 (46%), Gaps = 7/228 (3%)
Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
GR+ T L + VFS G G LGH C I + ++ +H+A +
Sbjct: 3056 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3114
Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
SG+++T G GH D N +P++V+ L G QV G T LT G
Sbjct: 3115 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3173
Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
V + G G+LG G + P++I L G V QI G + LA+T +GVV+++G G
Sbjct: 3174 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3232
Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
F LGHG +P+ ++ R G +V V+ G H +A+ SG V
Sbjct: 3233 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQV 3278
Score = 88.2 bits (217), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 110/237 (46%), Gaps = 17/237 (7%)
Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 169
+ G ++ L + V+S G G LGHG P+ S + + HVV ++
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AGKHVVHIA 557
Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
++A + G+++T G + GH + P LV LKG+ V G
Sbjct: 558 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQ 616
Query: 230 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
L + G V + G +G+LG G + TPK I L+++ VV++ G + +A+T +
Sbjct: 617 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSIALTKD 675
Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
G VYS+G G N LGHG + P+ ++ +G V+ V+AG H +AL V
Sbjct: 676 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEV 730
Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 118/251 (47%), Gaps = 12/251 (4%)
Query: 96 FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
L+S++H ++ A N + G++ L S V+S G + G LGHG + C
Sbjct: 4030 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4083
Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
I VV V+A H+A V +G ++T G GH D+ + +P+LVEAL+G
Sbjct: 4084 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4142
Query: 216 VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
+ +G T LT V + G +G+LG G + P I L +G VV+
Sbjct: 4143 HRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4201
Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
+ G + +A+T +G VY++G G LGHG +PR +Q +G V+ ++ G
Sbjct: 4202 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4259
Query: 334 HVVALDSSGYV 344
H V G V
Sbjct: 4260 HCVCCTEDGEV 4270
Score = 79.3 bits (194), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 110/221 (49%), Gaps = 12/221 (5%)
Query: 130 SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFT 186
V++CG + G LG G ++ V R +++VV+ V + HA + G+VF+
Sbjct: 3012 KVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3070
Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
G+ GH + +PRL+EALK + + G + + LT G ++T G +G
Sbjct: 3071 WGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 3129
Query: 247 QLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGH 303
+LGHGD + PK + L +G V+Q+A G + LA+T G+V+S+G G LG
Sbjct: 3130 RLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGR 3187
Query: 304 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
G P+ I+ R G V ++ G + +AL SG V
Sbjct: 3188 GGSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVV 3226
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 94/187 (50%), Gaps = 20/187 (10%)
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
V Q++ +E + ++G+V+T NS DT P+LV+ L ++ A
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 501
Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
+ +L + G V++ G G+LGHGDT+ PK I+ ++ G VV IA G +
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 561
Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
Y A+T G +Y++G G+ LGHG DE P + KG+ V+ V+ +GD +A
Sbjct: 562 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 619
Query: 338 LDSSGYV 344
+ +G V
Sbjct: 620 VTENGQV 626
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 91/190 (47%), Gaps = 11/190 (5%)
Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
SA +VVQV+ V G+V+ CG+ N G PI PR + AL
Sbjct: 2990 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3047
Query: 219 KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
K+V +G LT+ G V + G G+LGH ++ P+ I L + + IA
Sbjct: 3048 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL-KTKRIRDIAC 3106
Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
G S+ A+T +G +Y++G G LGHG+ +L+P+ ++ G V++V+ G D
Sbjct: 3107 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3164
Query: 335 VVALDSSGYV 344
+AL G V
Sbjct: 3165 TLALTDEGLV 3174
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)
Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
I G H+ L S+ +++ G G LGHG TTQ + + V+QV+
Sbjct: 3104 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3162
Query: 175 AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
A + G VF+ GD G R + P+ +E L G Q+ G F+ LT
Sbjct: 3163 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3221
Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
G V T G + +LGHG + P+ + L +V +A G + LAVT +G VY+
Sbjct: 3222 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3280
Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
+G + G+G +P +Q +G + RV+ G H VA
Sbjct: 3281 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3323
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 77/162 (47%), Gaps = 5/162 (3%)
Query: 183 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
+VF G N G ++ I P E L + QV G +T+ G V+ CG
Sbjct: 2960 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3018
Query: 243 NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
T+G+LG G + P P+ I L V V + +G + A+T +G V+S+G G +
Sbjct: 3019 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3078
Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
LGH + + +PR I+ + K I ++ G H AL SSG
Sbjct: 3079 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSG 3118
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 82/177 (46%), Gaps = 5/177 (2%)
Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA--FV 178
Y + + +++ G G LGHG + + V+ V+ A V
Sbjct: 562 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAV 620
Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
++GQV++ GD G R + P+L+E L+ + +V G F+ LT G V+
Sbjct: 621 TENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 679
Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
+ G + +LGHG PK + L+ V+ +AAG ++ LA+T + V+S+GS
Sbjct: 680 SWGKGDNQRLGHGTEEHVRYPKLLEGLQG-KKVIDVAAGSTHCLALTEDSEVHSWGS 735
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)
Query: 118 TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
+G TL L + +V+S G G LG G + C +I+ + VV+V +
Sbjct: 4152 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4210
Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
+ +SG V+T G GH + + RPR V+ L+G + G T G
Sbjct: 4211 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4269
Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
V+T G N GQLG G T P+ +A L+ V ++A G ++ LA
Sbjct: 4270 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4315
Score = 55.1 bits (131), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)
Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
+G TL ++ N V+S G G LG G + C + I VV+V +
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670
Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
+ + GQV++ G + GH T + P+L+E L+G V AG LT
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729
Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
VH+ GSN Q H DTL +P P ++ L + +V IA GP+ A
Sbjct: 730 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 775
Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)
Query: 122 HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
TL +++ VFS G G LG G + C I + V Q+ + + +
Sbjct: 3164 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 3222
Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
SG V+T G F GH ++ + +P++VE L+G V G +T G V+
Sbjct: 3223 SGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3281
Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
G N HGQ G+G T P + LE + ++A G S+ +A T
Sbjct: 3282 GDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 3325
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 67/137 (48%), Gaps = 3/137 (2%)
Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
P EAL + Q+ G +T G ++ G G+LG G T TP + ++
Sbjct: 3976 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQ 4035
Query: 267 EVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
V V + +G + LA++ G VYS+G + LGHG + +PR I++ R GI V
Sbjct: 4036 HVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLR--GIEV 4093
Query: 326 VRVSAGDEHVVALDSSG 342
V V+AG H + ++G
Sbjct: 4094 VDVAAGGAHSACVTAAG 4110
Score = 41.2 bits (95), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 7/113 (6%)
Query: 235 GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
G ++ G N GQLG G + PTP +++A L V Q+ G + AVT +G +Y
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4007
Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
+ G G+ LG G P +++ + I V V++G +H +AL S G V
Sbjct: 4008 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4060
>sp|Q4U2R1|HERC2_MOUSE E3 ubiquitin-protein ligase HERC2 OS=Mus musculus GN=Herc2 PE=1 SV=3
Length = 4836
Score = 89.4 bits (220), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 107/228 (46%), Gaps = 7/228 (3%)
Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
GR+ T L + VFS G G LGH C I + ++ +H+A +
Sbjct: 3057 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3115
Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
SG+++T G GH D N +P++V+ L G QV G T LT G
Sbjct: 3116 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3174
Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
V + G G+LG G + P++I L G V QI G + LA+T +GVV+++G G
Sbjct: 3175 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3233
Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
F LGHG +P+ ++ R G +V V+ G H +A+ SG V
Sbjct: 3234 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQV 3279
Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 118/251 (47%), Gaps = 12/251 (4%)
Query: 96 FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
L+S++H ++ A N + G++ L S V+S G + G LGHG + C
Sbjct: 4032 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4085
Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
I VV V+A H+A V +G ++T G GH D+ + +P+LVEAL+G
Sbjct: 4086 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4144
Query: 216 VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
+ +G T LT V + G +G+LG G + P I L +G VV+
Sbjct: 4145 HRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4203
Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
+ G + +A+T +G VY++G G LGHG +PR +Q +G V+ ++ G
Sbjct: 4204 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4261
Query: 334 HVVALDSSGYV 344
H V G V
Sbjct: 4262 HCVCCTEDGEV 4272
Score = 87.4 bits (215), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 110/237 (46%), Gaps = 17/237 (7%)
Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 169
+ G ++ L + V+S G G LGHG P+ S + + HVV ++
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AGKHVVHIA 558
Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
++A + G+++T G + GH + P LV LKG+ V G
Sbjct: 559 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQ 617
Query: 230 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
L + G V + G +G+LG G + TPK I L+++ V+++ G + +A+T +
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVIKVRCGSQFSIALTKD 676
Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
G VYS+G G N LGHG + P+ ++ +G V+ V+AG H +AL V
Sbjct: 677 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEV 731
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 110/221 (49%), Gaps = 12/221 (5%)
Query: 130 SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFT 186
V+SCG + G LG G ++ V R +++VV+ V + HA + G+VF+
Sbjct: 3013 KVYSCGEATNGRLGLG-MSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3071
Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
G+ GH + +PRL+EALK + + G + + LT G ++T G +G
Sbjct: 3072 WGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 3130
Query: 247 QLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGH 303
+LGHGD + PK + L +G V+Q+A G + LA+T G+V+S+G G LG
Sbjct: 3131 RLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGR 3188
Query: 304 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
G P+ I+ R G V ++ G + +AL SG V
Sbjct: 3189 GGSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVV 3227
Score = 75.1 bits (183), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 94/187 (50%), Gaps = 20/187 (10%)
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
V+QV+ +E + ++G+V+T NS + P+LV+ L ++ A
Sbjct: 454 VMQVACAEKRFLILSRNGRVYTQAYNSD-----------MLAPQLVQGLASRNIVKIAAH 502
Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
+ +L + G V++ G G+LGHGDT+ PK I+ ++ G VV IA G +
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562
Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
Y A+T G +Y++G G+ LGHG DE P + KG+ V+ V+ +GD +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 620
Query: 338 LDSSGYV 344
+ +G V
Sbjct: 621 VTENGQV 627
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 92/190 (48%), Gaps = 11/190 (5%)
Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
SA +VVQV+ V G+V++CG+ N G PI PR + AL
Sbjct: 2991 SALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPI--PRQITALSSYVV 3048
Query: 219 KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
K+V +G LT+ G V + G G+LGH ++ P+ I L + + IA
Sbjct: 3049 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL-KTKRIRDIAC 3107
Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
G S+ A+T +G +Y++G G LGHG+ +L+P+ ++ G V++V+ G D
Sbjct: 3108 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3165
Query: 335 VVALDSSGYV 344
+AL G V
Sbjct: 3166 TLALTDEGLV 3175
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)
Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
I G H+ L S+ +++ G G LGHG TTQ + + V+QV+
Sbjct: 3105 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3163
Query: 175 AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
A + G VF+ GD G R + P+ +E L G Q+ G F+ LT
Sbjct: 3164 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3222
Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
G V T G + +LGHG + P+ + L +V +A G + LAVT +G VY+
Sbjct: 3223 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3281
Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
+G + G+G +P +Q +G + RV+ G H VA
Sbjct: 3282 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3324
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 78/162 (48%), Gaps = 5/162 (3%)
Query: 183 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
+VF G N G ++ I P E L + QV G +T+ G V++CG
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGE 3019
Query: 243 NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
T+G+LG G + P P+ I L V V + +G + A+T +G V+S+G G +
Sbjct: 3020 ATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3079
Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
LGH + + +PR I+ + K I ++ G H AL SSG
Sbjct: 3080 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSG 3119
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 82/177 (46%), Gaps = 5/177 (2%)
Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA--FV 178
Y + + +++ G G LGHG + + V+ V+ A V
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAV 621
Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
++GQV++ GD G R + P+L+E L+ + +V G F+ LT G V+
Sbjct: 622 TENGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVY 680
Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
+ G + +LGHG PK + L+ V+ +AAG ++ LA+T + V+S+GS
Sbjct: 681 SWGKGDNQRLGHGTEEHVRYPKLLEGLQG-KKVIDVAAGSTHCLALTEDSEVHSWGS 736
Score = 56.2 bits (134), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)
Query: 118 TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
+G TL L + +V+S G G LG G + C +I+ + VV+V +
Sbjct: 4154 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4212
Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
+ +SG V+T G GH + + RPR V+ L+G + G T G
Sbjct: 4213 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4271
Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
V+T G N GQLG G T P+ +A L+ V ++A G ++ LA
Sbjct: 4272 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4317
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)
Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
+G TL ++ N V+S G G LG G + C + I V++V +
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVIKVRCGSQFSI 671
Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
+ + GQV++ G + GH T + P+L+E L+G V AG LT
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730
Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
VH+ GSN Q H DTL +P P ++ L+ +V IA GP+ A
Sbjct: 731 VHSWGSNDQCQ--HFDTLRVTKPEPTALPGLDS-KHIVGIACGPAQSFA 776
Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)
Query: 122 HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
TL +++ VFS G G LG G + C I + V Q+ + + +
Sbjct: 3165 QTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 3223
Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
SG V+T G F GH ++ + +P++VE L+G V G +T G V+
Sbjct: 3224 SGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3282
Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
G N HGQ G+G T P + LE + ++A G S+ +A T
Sbjct: 3283 GDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 3326
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 67/137 (48%), Gaps = 3/137 (2%)
Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
P EAL + Q+ G +T G ++ G G+LG G T TP + ++
Sbjct: 3978 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQ 4037
Query: 267 EVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
V V + +G + LA++ G VYS+G + LGHG + +PR I++ R GI V
Sbjct: 4038 HVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLR--GIEV 4095
Query: 326 VRVSAGDEHVVALDSSG 342
V V+AG H + ++G
Sbjct: 4096 VDVAAGGAHSACVTAAG 4112
Score = 41.2 bits (95), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 7/113 (6%)
Query: 235 GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
G ++ G N GQLG G + PTP +++A L V Q+ G + AVT +G +Y
Sbjct: 3954 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4009
Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
+ G G+ LG G P +++ + I V V++G +H +AL S G V
Sbjct: 4010 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4062
>sp|Q6PAV2|HERC4_MOUSE Probable E3 ubiquitin-protein ligase HERC4 OS=Mus musculus GN=Herc4
PE=2 SV=2
Length = 1057
Score = 89.4 bits (220), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 119/252 (47%), Gaps = 10/252 (3%)
Query: 98 QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLG-HGPETTQCVSF 154
+S + +V A N+ + G HTL +++ V++ G G LG G E +C+
Sbjct: 70 KSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSE--ECIRV 127
Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
R I S +VQV+ H+ + ++ +VF G N G + P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSL 187
Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
G+P QV AG + LT+ G + G N GQLG D DR P + L +V
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246
Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
I G + A+T G V++FG+G LGH E+ PR + F G V +V+ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQ 304
Query: 334 HVVA-LDSSGYV 344
H A + SSG +
Sbjct: 305 HTSAFVPSSGRI 316
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 108/226 (47%), Gaps = 7/226 (3%)
Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
R+ ++ + +V++CG + G LGH + ++ A ++V V+ E H +
Sbjct: 44 RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVACGEAHTLALN 100
Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
GQV+ G +S G + + I PR +++L + QV G + L+ V
Sbjct: 101 DKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160
Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
G N +GQLG G D + +P+ I L + +Q+AAG ++ +T +G ++ +G
Sbjct: 161 WGQNKYGQLGLGIDCQKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219
Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
LG +++D P +++ R + I V + G++H AL G V
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGV 263
Score = 79.3 bits (194), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)
Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
+Q+ G YH+L +S +S VF G + G LG G + + S I +QV+A
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGG 199
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
H+ + SG +F G N G D N + P L+++L+ + G + T LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
G V T G+ +GQLGH T P+ + E +GS+V Q+A G + A V +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHTSAFVPSSGRI 316
Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
YSFG G N LG G + P ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 65.1 bits (157), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 86/191 (45%), Gaps = 8/191 (4%)
Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
R +F V V H FVL G V+TCG N GH + + +P V AL
Sbjct: 27 RSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDA 83
Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGDTLDRPTPKSIAPLEEVGSVVQI 274
V G T L +G V+ G ++ GQLG G P++I L ++ +VQ+
Sbjct: 84 QNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDI-QIVQV 142
Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
A G + LA++ V+ +G LG G + + P+ I++ GI ++V+AG
Sbjct: 143 ACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLL--GIPFMQVAAGGA 200
Query: 334 HVVALDSSGYV 344
H L SG +
Sbjct: 201 HSFVLTLSGAI 211
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 71/142 (50%), Gaps = 6/142 (4%)
Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
+ PR + + V GL T F+ G V+TCG N GQLGH + R P+ +
Sbjct: 22 VLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79
Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG-HGEQHDELQPRAIQTFRRKG 322
L + ++V +A G ++ LA+ G VY++G S+ LG G + PR I++
Sbjct: 80 AL-DAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSL--SD 136
Query: 323 IHVVRVSAGDEHVVALDSSGYV 344
I +V+V+ G H +AL + V
Sbjct: 137 IQIVQVACGYYHSLALSKASEV 158
>sp|F2Z461|HERC6_MOUSE E3 ISG15--protein ligase Herc6 OS=Mus musculus GN=Herc6 PE=2 SV=1
Length = 1003
Score = 87.4 bits (215), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/245 (30%), Positives = 117/245 (47%), Gaps = 27/245 (11%)
Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 165
+Q +G +H+LL+ SN V+SCG + G LG PE Q ++ HV
Sbjct: 25 LQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQALN--------DLHV 76
Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
VS + H+ V G+VF G S G + F P ++AL G+ QV+ G
Sbjct: 77 DLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGH 136
Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
+ L+ GHV + G N+ GQLG G ++ + P+ + LE + + Q+AAG ++ A+
Sbjct: 137 YHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGI-PLAQVAAGGTHSFAL 195
Query: 285 TGNGVVYSFGSGSN----FCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
+ G SFG GSN L + +++ +P +I K + V+ +S G EH L
Sbjct: 196 SLTGT--SFGWGSNRSGQLALSGNKVKEQIYKPHSIGAL--KNLSVIYISCGYEHTAVLT 251
Query: 340 SSGYV 344
G V
Sbjct: 252 EEGQV 256
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 97/184 (52%), Gaps = 6/184 (3%)
Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
S ++Q ++ E+H+ + + +V++CGDNS G R ++ RP ++AL +
Sbjct: 20 SGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQR-RDQSTERPEPIQALNDLHVDL 78
Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPS 279
V+ G + + +G V G+ + GQLG G+ + P I L + ++Q++ G
Sbjct: 79 VSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGI-KIIQVSCGHY 137
Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
+ LA++ +G V+S+G S LG G+ + P+ +++ +GI + +V+AG H AL
Sbjct: 138 HSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSL--EGIPLAQVAAGGTHSFAL 195
Query: 339 DSSG 342
+G
Sbjct: 196 SLTG 199
Score = 69.7 bits (169), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 106/226 (46%), Gaps = 8/226 (3%)
Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
++ G+ H++ + + VF+ G+ G LG G T+I + ++QVS H
Sbjct: 79 VSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGHYH 138
Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
+ + + G VF+ G NS G +R P+ V++L+G+P QV AG + L++
Sbjct: 139 SLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLT 198
Query: 235 GHVHTCGSNTHGQLG-HGDTLDRP--TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
G GSN GQL G+ + P SI L+ + SV+ I+ G + +T G V+
Sbjct: 199 GTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNL-SVIYISCGYEHTAVLTEEGQVF 257
Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
+FG S+ L + + P+ I+ G V ++ H +A
Sbjct: 258 TFGGNSSGQLQPSPRSGQRGPQLIEGI---GGRVSQIECASYHTIA 300
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 71/141 (50%), Gaps = 5/141 (3%)
Query: 206 RPRLVEA-LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
+PR ++A G+ Q +G + + L V++CG N+ GQLG P+ I
Sbjct: 11 KPRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQA 70
Query: 265 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGI 323
L ++ V ++ G + +AV G V+++G+GS LG GE + P I+ GI
Sbjct: 71 LNDL-HVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKAL--AGI 127
Query: 324 HVVRVSAGDEHVVALDSSGYV 344
+++VS G H +AL G+V
Sbjct: 128 KIIQVSCGHYHSLALSEDGHV 148
>sp|Q5PQN1|HERC4_RAT Probable E3 ubiquitin-protein ligase HERC4 OS=Rattus norvegicus
GN=Herc4 PE=2 SV=1
Length = 1057
Score = 81.3 bits (199), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 99/206 (48%), Gaps = 6/206 (2%)
Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
+Q+ G YH+L +S +S VF G + G LG G E + S I +QV+A
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGG 199
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
H+ + SG +F G N G D N + P L+++L+ + G + T LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
G V T G+ +GQLGH T P+ + E +GS+V QIA G + A V +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316
Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
YSFG G N LG G + P ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 107/226 (47%), Gaps = 7/226 (3%)
Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
R+ ++ + +V++CG + G LGH + ++ A ++V VS E H +
Sbjct: 44 RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100
Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
GQV+ G +S G + + I PR +++L + QV G + L+ V
Sbjct: 101 DKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160
Query: 240 CGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
G N +GQLG G + T P+ I L + +Q+AAG ++ +T +G ++ +G
Sbjct: 161 WGQNKYGQLGLGIECQKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219
Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
LG +++D P +++ R + I V + G++H AL G V
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGV 263
Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 96/213 (45%), Gaps = 9/213 (4%)
Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
G++ G LG G + V R +F V V H FVL G V+TCG N
Sbjct: 5 GNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64
Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGD 252
GH + + +P V AL V+ G T L +G V+ G ++ GQLG G
Sbjct: 65 QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGS 121
Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
P++I L ++ +VQ+A G + LA++ V+ +G LG G E +
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTS 180
Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
P+ I++ GI ++V+AG H L SG +
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAI 211
>sp|Q6NRS1|IBTK_XENLA Inhibitor of Bruton tyrosine kinase OS=Xenopus laevis GN=ibtk PE=2
SV=1
Length = 1339
Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 111/232 (47%), Gaps = 20/232 (8%)
Query: 129 SSVFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSASENHAAFVLQSGQVFTC 187
+ +++ G ++ LGHG + ++ FP S ++ Q+ + H+ F+ Q GQV+TC
Sbjct: 143 TELYTWGDNVNFTLGHGTQQSKHHPELVEMFPRSGVYIKQMVLCKFHSVFLSQKGQVYTC 202
Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
G GH D PRLVE L+G PC QV + T LT G+V+T G NT Q
Sbjct: 203 GHGQGGRLGHGD-ELTCLVPRLVEGLRGHPCTQVAGAKDHTVVLTEDGYVYTFGLNTFHQ 261
Query: 248 LGHGDTLDRPTPKSIAPLE------EVGSVVQIAAGPSYMLAVTGNGVVYSFG-SGSNFC 300
LG + P P S P + + +V+ +AAG + + T + VY+ G +G
Sbjct: 262 LG----IQPPPPNSNVPRQIQAKTMKGKTVLGVAAGRFHTVLWTKDA-VYTVGLNGGQ-- 314
Query: 301 LGHGEQHDELQ----PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSLCS 348
LG+ + + + PR + K I++ VSA D V + G + L S
Sbjct: 315 LGYLQDPNGEKFVSCPRQVSALHHKDINITLVSASDGATVCVSERGDIYLLS 366
Score = 45.4 bits (106), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 74/160 (46%), Gaps = 10/160 (6%)
Query: 98 QSVEHSSDIVETSAGN----MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCV 152
Q +H ++VE + Q+ ++H++ +S V++CG G LGHG E T C+
Sbjct: 161 QQSKHHPELVEMFPRSGVYIKQMVLCKFHSVFLSQKGQVYTCGHGQGGRLGHGDELT-CL 219
Query: 153 SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA 212
+ QV+ +++H + + G V+T G N+ G + PR ++A
Sbjct: 220 VPRLVEGLRGHPCTQVAGAKDHTVVLTEDGYVYTFGLNTFHQLGIQPPPPNSNVPRQIQA 279
Query: 213 --LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH 250
+KG V AG F L + V+T G N GQLG+
Sbjct: 280 KTMKGKTVLGVAAG-RFHTVLWTKDAVYTVGLNG-GQLGY 317
>sp|Q5RCZ7|RCBT2_PONAB RCC1 and BTB domain-containing protein 2 OS=Pongo abelii GN=RCBTB2
PE=2 SV=1
Length = 551
Score = 79.7 bits (195), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 95/218 (43%), Gaps = 4/218 (1%)
Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
N +F G++ CG LG G + + R++ + + +S S H G+VFT
Sbjct: 64 NDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFT 122
Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
G N+ G+ TN + + L +V G + LT G V G N G
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 182
Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
Q+G G T+++P P+ + + VV IA G +AV G VY +G N LG G
Sbjct: 183 QVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNS 242
Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
+ QP + +GI V RV+ G H + L G V
Sbjct: 243 GN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQV 278
Score = 62.8 bits (151), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 93/187 (49%), Gaps = 12/187 (6%)
Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
+++ G YH+L L S+ VF+ G + G +G G Q + VV ++ +
Sbjct: 155 IEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ 214
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
V+ +G+V+ G N + G ++ N+P P V AL+G+ ++V G T L
Sbjct: 215 MCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPT--PCRVAALQGIRVQRVACGYAHTLVL 272
Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDR--PTPKSIAPLEEVGSVVQIAAGPS--YMLAVTGN 287
T G V+ G+N++GQLG G+ ++ PTP ++ E +++IAA S A T
Sbjct: 273 TDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTV----EKDRIIEIAACHSTHTSAAKTQG 328
Query: 288 GVVYSFG 294
G VY +G
Sbjct: 329 GHVYMWG 335
Score = 39.7 bits (91), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 53/116 (45%), Gaps = 3/116 (2%)
Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE-EVGSVVQIAAGPSYMLAVTGNG 288
+ T+ + G+N G LG GD P+ + L + + + +GP +LA T G
Sbjct: 60 YTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATT-EG 118
Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
V+++G + LG+G + L P I T V+ V+ G H + L S G V
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVIEVACGSYHSLVLTSDGEV 173
>sp|O95199|RCBT2_HUMAN RCC1 and BTB domain-containing protein 2 OS=Homo sapiens GN=RCBTB2
PE=2 SV=1
Length = 551
Score = 79.7 bits (195), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 95/218 (43%), Gaps = 4/218 (1%)
Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
N +F G++ CG LG G + + R++ + + +S S H G+VFT
Sbjct: 64 NDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFT 122
Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
G N+ G+ TN + + L +V G + LT G V G N G
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 182
Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
Q+G G T+++P P+ + + VV IA G +AV G VY +G N LG G
Sbjct: 183 QVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNS 242
Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
+ QP + +GI V RV+ G H + L G V
Sbjct: 243 GN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQV 278
Score = 62.8 bits (151), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 93/187 (49%), Gaps = 12/187 (6%)
Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
+++ G YH+L L S+ VF+ G + G +G G Q + VV ++ +
Sbjct: 155 IEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ 214
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
V+ +G+V+ G N + G ++ N+P P V AL+G+ ++V G T L
Sbjct: 215 MCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPT--PCRVAALQGIRVQRVACGYAHTLVL 272
Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDR--PTPKSIAPLEEVGSVVQIAAGPS--YMLAVTGN 287
T G V+ G+N++GQLG G+ ++ PTP ++ E +++IAA S A T
Sbjct: 273 TDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTV----EKDRIIEIAACHSTHTSAAKTQG 328
Query: 288 GVVYSFG 294
G VY +G
Sbjct: 329 GHVYMWG 335
Score = 39.7 bits (91), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 53/116 (45%), Gaps = 3/116 (2%)
Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE-EVGSVVQIAAGPSYMLAVTGNG 288
+ T+ + G+N G LG GD P+ + L + + + +GP +LA T G
Sbjct: 60 YTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATT-EG 118
Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
V+++G + LG+G + L P I T V+ V+ G H + L S G V
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVIEVACGSYHSLVLTSDGEV 173
>sp|Q5GLZ8|HERC4_HUMAN Probable E3 ubiquitin-protein ligase HERC4 OS=Homo sapiens GN=HERC4
PE=1 SV=1
Length = 1057
Score = 79.0 bits (193), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 107/226 (47%), Gaps = 7/226 (3%)
Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
R+ ++ + +V++CG + G LGH + ++ A ++V VS E H +
Sbjct: 44 RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100
Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
GQV+ G +S G + I PR +++L + QV G + L+ V
Sbjct: 101 DKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160
Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
G N +GQLG G D + +P+ + L + +Q+AAG ++ +T +G ++ +G
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219
Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
LG +++D P +++ R + I V + G++H AL G V
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGV 263
Score = 78.2 bits (191), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 99/206 (48%), Gaps = 6/206 (2%)
Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
+Q+ G YH+L +S +S VF G + G LG G + + S + +QV+A
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGG 199
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
H+ + SG +F G N G D N + P L+++L+ + G + T LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
G V T G+ +GQLGH T P+ + E +GS+V +IA G + A V +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQHTSAFVPSSGRI 316
Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
YSFG G N LG G + P ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 62.0 bits (149), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 95/213 (44%), Gaps = 9/213 (4%)
Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
G++ G LG G + V R +F V V H FVL G V+TCG N
Sbjct: 5 GNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64
Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
GH + + +P V AL V+ G T L +G V+ G ++ GQLG G
Sbjct: 65 QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGS 121
Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
P++I L ++ +VQ+A G + LA++ V+ +G LG G +
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180
Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
P+ +++ GI ++V+AG H L SG +
Sbjct: 181 PQLLKSLL--GIPFMQVAAGGAHSFVLTLSGAI 211
>sp|Q80YD6|SRGEF_MOUSE Secretion-regulating guanine nucleotide exchange factor OS=Mus
musculus GN=Sergef PE=2 SV=2
Length = 464
Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 104/224 (46%), Gaps = 17/224 (7%)
Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
+F+ G++ G LG G + + +F A + V+ H+A V G +F CG N
Sbjct: 17 LFAWGANSYGQLGLGHKEDVFLPQQLSDFCQAGCIKSVTGGGGHSAVVTDGGDLFVCGLN 76
Query: 191 SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG- 249
G T + R + + L+G P +QV G +FT LT +G V +CGSN GQLG
Sbjct: 77 KDGQLGLGHTEE-VLRFTICKPLRGCPIRQVACGWDFTIMLTEKGQVLSCGSNAFGQLGV 135
Query: 250 -HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG-----SGSNFCLGH 303
HG P++I L E VV +AAG + LA T G V+ +G SG C G
Sbjct: 136 PHGPR-KCVVPQAIECLRE--KVVCVAAGLRHALATTATGSVFQWGTGLASSGRRLCPG- 191
Query: 304 GEQHDELQPRAIQTFRRKGIH---VVRVSAGDEHVVALDSSGYV 344
Q+ L A + R G+ V AG +H +L +G +
Sbjct: 192 --QNLPLFLTAKEPSRVTGLENSTAVCAVAGSDHSASLTDTGEL 233
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 89/210 (42%), Gaps = 20/210 (9%)
Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLG--HGPETTQCVSFTRINFPSAAHVVQVSAS 171
Q+ G T++++ V SCGS+ G LG HGP +CV I VV V+A
Sbjct: 105 QVACGWDFTIMLTEKGQVLSCGSNAFGQLGVPHGPR--KCVVPQAIEC-LREKVVCVAAG 161
Query: 172 ENHAAFVLQSGQVFTCG-----DNSSFCCGHRDTNRPIF----RPRLVEALKGVPCKQVT 222
HA +G VF G C G N P+F P V L+
Sbjct: 162 LRHALATTATGSVFQWGTGLASSGRRLCPGQ---NLPLFLTAKEPSRVTGLENSTAVCAV 218
Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYM 281
AG + + LT G ++ G N HGQL + P P+ I A + V + +G +++
Sbjct: 219 AGSDHSASLTDTGELYVWGRNKHGQLAS-RAVFLPLPQRIEAHYFQDEKVTAVWSGWTHL 277
Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQ 311
+A T G V+++G LG + E Q
Sbjct: 278 VAKTETGKVFTWGRADYGQLGRRLEPPEAQ 307
>sp|Q99LJ7|RCBT2_MOUSE RCC1 and BTB domain-containing protein 2 OS=Mus musculus GN=Rcbtb2
PE=2 SV=1
Length = 551
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 93/218 (42%), Gaps = 4/218 (1%)
Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
N +F G++ G LG G + + R++ + + +S S H G+VFT
Sbjct: 64 NDEIFVLGTNCSGCLGVG-DIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFT 122
Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
G N+ G+ TN + + L +V G + LT G V G N G
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 182
Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
Q+G G T ++P P+ + + V+ IA G +AV G VY +G N LG G
Sbjct: 183 QVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSS 242
Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
+ QP + +GI V RV+ G H + L G +
Sbjct: 243 GN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQI 278
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 91/185 (49%), Gaps = 8/185 (4%)
Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
+++ G YH+L L S+ VF+ G + G +G G Q + V+ ++ +
Sbjct: 155 IEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQ 214
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
+ V+ +G+V+ G N + G + N+P P V AL+G+ ++V G T L
Sbjct: 215 MCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPT--PCRVAALQGIRVQRVACGYAHTLVL 272
Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS--YMLAVTGNGV 289
T G ++ G+N++GQLG G+ ++ P + + E +++IAA S A T G
Sbjct: 273 TDEGQIYAWGANSYGQLGTGNKSNQSYPTPV--VVEKDRIIEIAACHSAHTSAAKTQGGH 330
Query: 290 VYSFG 294
VY +G
Sbjct: 331 VYMWG 335
Score = 40.8 bits (94), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 68/146 (46%), Gaps = 8/146 (5%)
Query: 203 PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 260
PIF E L+ + C +AG N + T+ + G+N G LG GD P+
Sbjct: 32 PIFSLCSEEELQLIRQACVFGSAG-NEVLYTTVNDEIFVLGTNCSGCLGVGDIQSTIEPR 90
Query: 261 SIAPL--EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 318
+ L +++ S + +GP +LA T +G V+++G + LG+G + L P I T
Sbjct: 91 RLDSLTGKKIAS-LSYGSGPHIVLATT-DGEVFTWGHNAYSQLGNGTTNHGLVPCHIST- 147
Query: 319 RRKGIHVVRVSAGDEHVVALDSSGYV 344
V+ V+ G H + L S G V
Sbjct: 148 NLSNKQVIEVACGSYHSLVLTSDGEV 173
>sp|Q6P798|RCBT2_RAT RCC1 and BTB domain-containing protein 2 OS=Rattus norvegicus
GN=Rcbtb2 PE=2 SV=1
Length = 551
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 93/218 (42%), Gaps = 4/218 (1%)
Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
N +F G++ G LG G + + R++ + + +S S H G+VFT
Sbjct: 64 NDEIFVLGTNCSGCLGVG-DIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFT 122
Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
G N+ G+ TN + + L +V G + LT G V G N G
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 182
Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
Q+G G T ++P P+ + + V+ IA G +AV G VY +G N LG G
Sbjct: 183 QVGSGSTANQPIPRRVTGCLQNKVVMSIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSS 242
Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
+ QP + +GI V RV+ G H + L G +
Sbjct: 243 GN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQI 278
Score = 58.9 bits (141), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 83/165 (50%), Gaps = 6/165 (3%)
Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
+++ G YH+L L S+ VF+ G + G +G G Q + V+ ++ +
Sbjct: 155 IEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMSIACGQ 214
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
+ V+ +G+V+ G N + G + N+P P V AL+G+ ++V G T L
Sbjct: 215 MCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPT--PCRVAALQGIRVQRVACGYAHTLVL 272
Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
T G ++ G+N++GQLG G+ ++ P + + E +++IAA
Sbjct: 273 TDEGQIYAWGANSYGQLGTGNKSNQSYPTPV--VVEKDRIIEIAA 315
Score = 42.4 bits (98), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 68/146 (46%), Gaps = 8/146 (5%)
Query: 203 PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 260
PIF E L+ + C TAG N + T+ + G+N G LG GD P+
Sbjct: 32 PIFSLCSEEELQLIRQACVFGTAG-NEVLYTTVNDEIFVLGTNCSGCLGVGDIQSTIEPR 90
Query: 261 SIAPL--EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 318
+ L +++ S + +GP +LA T +G V+++G + LG+G + L P I T
Sbjct: 91 RLDSLTGKKIAS-LSYGSGPHIVLATT-DGEVFTWGHNAYSQLGNGTTNHGLVPCHIST- 147
Query: 319 RRKGIHVVRVSAGDEHVVALDSSGYV 344
V+ V+ G H + L S G V
Sbjct: 148 NLSNKQVIEVACGSYHSLVLTSDGEV 173
>sp|Q8IVU3|HERC6_HUMAN Probable E3 ubiquitin-protein ligase HERC6 OS=Homo sapiens GN=HERC6
PE=2 SV=2
Length = 1022
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 98/182 (53%), Gaps = 6/182 (3%)
Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
A ++Q ++ E H+ +L + +V +CGDNS G R R P ++AL+ + V+
Sbjct: 23 AELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGEL-PEPIQALETLIVDLVS 81
Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYM 281
G + + +G V G+ + GQLG G+ + TPK I L ++ ++Q++ G +
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDI-KIIQVSCGHYHS 140
Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
LA++ + V+S+G S+ LG G++ + P+ +++ +GI + +V+AG H AL
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHSFALSL 198
Query: 341 SG 342
G
Sbjct: 199 CG 200
Score = 72.0 bits (175), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 107/241 (44%), Gaps = 19/241 (7%)
Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 165
+Q +G H+LL+ +N V SCG + G LG PE Q + ++
Sbjct: 26 LQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDL------ 79
Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
VS + H+ V G+VF G S G + F P+ + L + QV+ G
Sbjct: 80 --VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGH 137
Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
+ L+ V + G N+HGQLG G + +P+ + LE + + Q+AAG ++ A+
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFAL 196
Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQP-RAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
+ G + +GS S L ++ +Q + + K + VV +S GD H L G
Sbjct: 197 SLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGK 256
Query: 344 V 344
V
Sbjct: 257 V 257
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 89/187 (47%), Gaps = 6/187 (3%)
Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
+Q++ G YH+L +S +S VFS G + G LG G E S R+ + QV+A
Sbjct: 131 IQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGG 190
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPI--FRPRLVEALKGVPCKQVTAGLNFTGF 230
H+ + G F G NS+ N P+ +P V ALK + ++ G T
Sbjct: 191 AHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAV 250
Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA-VTGNGV 289
LT G V T G N GQLG+ T ++ P+ + ++ G V QI G + LA V G
Sbjct: 251 LTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERID--GLVSQIDCGSYHTLAYVHTTGQ 308
Query: 290 VYSFGSG 296
V SFG G
Sbjct: 309 VVSFGHG 315
Score = 69.3 bits (168), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 113/228 (49%), Gaps = 12/228 (5%)
Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFT--RINFPSAAHVVQVSASE 172
++ G+ H+L + + VF+ G+ G LG G + +SFT +I + ++QVS
Sbjct: 80 VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIG--EFKEISFTPKKIMTLNDIKIIQVSCGH 137
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
H+ + + QVF+ G NS G P+ V +L+G+P QV AG + L+
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS 197
Query: 233 IRGHVHTCGSNTHGQL---GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
+ G GSN+ GQL G + P S+ L+ +G VV I+ G ++ +T +G
Sbjct: 198 LCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLG-VVYISCGDAHTAVLTQDGK 256
Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
V++FG + LG+ ++ P+ ++ R G+ V ++ G H +A
Sbjct: 257 VFTFGDNRSGQLGYSPTPEKRGPQLVE--RIDGL-VSQIDCGSYHTLA 301
Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 67/155 (43%), Gaps = 11/155 (7%)
Query: 193 FCCG--HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH 250
FC G R+ R R G Q +G + L V +CG N+ GQLG
Sbjct: 3 FCWGADSRELQR-----RRTAGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGR 57
Query: 251 GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDE 309
P+ I LE + V ++ G + LAV G V+++G+GS LG GE +
Sbjct: 58 RGAQRGELPEPIQALETL-IVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEIS 116
Query: 310 LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
P+ I T I +++VS G H +AL V
Sbjct: 117 FTPKKIMTL--NDIKIIQVSCGHYHSLALSKDSQV 149
>sp|Q6NYE2|RCC2_DANRE Protein RCC2 homolog OS=Danio rerio GN=rcc2 PE=2 SV=1
Length = 495
Score = 72.0 bits (175), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 109/245 (44%), Gaps = 26/245 (10%)
Query: 122 HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
H+L+I+ ++S G + G LGHG +T + + I +V + NH + +
Sbjct: 134 HSLIITTEGKLWSWGRNDKGQLGHG-DTKRLEAPKLIEGLGEEVIVAAACGRNHTLALTE 192
Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
+G V+T G+N G + + P ++ G P +V G F+ + +G++++
Sbjct: 193 NGTVYTFGENKLGQLGQGNQTDAVLSPATIQ-YNGQPIVKVACGAEFSMIVDCKGNLYSF 251
Query: 241 GSNTHGQLGH---GDTLDRPT---------PKSIAPLEE---------VGSVV--QIAAG 277
G +GQLGH G + R P+ +A E V +VV +A G
Sbjct: 252 GCPEYGQLGHNSDGKFIARAQRIEFDCELIPRRVAIFIEKTKDGQVLPVPNVVARDVACG 311
Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
++ L + V+S+G G LGH EQ DE+ PR ++ F G ++ G + A
Sbjct: 312 ANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGATQIYCGYQCSFA 371
Query: 338 LDSSG 342
L G
Sbjct: 372 LSEMG 376
Score = 31.6 bits (70), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 274 IAAGP--SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
+ +GP ++ L +T G ++S+G LGHG+ P+ I+ + I V + G
Sbjct: 126 VVSGPCAAHSLIITTEGKLWSWGRNDKGQLGHGDTKRLEAPKLIEGLGEEVI--VAAACG 183
Query: 332 DEHVVALDSSGYV 344
H +AL +G V
Sbjct: 184 RNHTLALTENGTV 196
>sp|Q90XC2|NEK8_DANRE Serine/threonine-protein kinase Nek8 OS=Danio rerio GN=nek8 PE=2
SV=1
Length = 697
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 78/158 (49%), Gaps = 8/158 (5%)
Query: 164 HVVQVSASENHAAFVLQSGQVFT-----CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
V+QVS V +SG++ T G G + +P F R +E GV
Sbjct: 341 EVIQVSLGRTQKMGVTKSGRLITWEAPSVGSGEPTLPGAVEQMQPQFISRFLEGQSGVTI 400
Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG 277
K V+ G FT LT RG + T GS ++G LGHG+ D PK + L +G +VQ++ G
Sbjct: 401 KSVSCGDLFTTCLTDRGIIMTFGSGSNGCLGHGNFNDVTQPKIVEAL--LGYELVQVSCG 458
Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAI 315
S++LAVT V+S+G G N LG Q P+ +
Sbjct: 459 ASHVLAVTNEREVFSWGRGDNGRLGLATQDSHNCPQQV 496
Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
++ ++ G + +T G++ +FGSGSN CLGHG +D QP+ ++ G +V+VS
Sbjct: 399 TIKSVSCGDLFTTCLTDRGIIMTFGSGSNGCLGHGNFNDVTQPKIVEALL--GYELVQVS 456
Query: 330 AGDEHVVAL 338
G HV+A+
Sbjct: 457 CGASHVLAV 465
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 109/272 (40%), Gaps = 44/272 (16%)
Query: 95 RFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSF 154
RFL+ + I S G++ + T L + + GS G LGHG +F
Sbjct: 390 RFLEG-QSGVTIKSVSCGDL------FTTCLTDRGIIMTFGSGSNGCLGHG-------NF 435
Query: 155 TRINFPSAAH------VVQVSASENHAAFVLQSGQVFTCG--DNSSFCCGHRDTNRPIFR 206
+ P +VQVS +H V +VF+ G DN +D++
Sbjct: 436 NDVTQPKIVEALLGYELVQVSCGASHVLAVTNEREVFSWGRGDNGRLGLATQDSHNC--- 492
Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
P+ V ++V G++ + ++ + + CG+N +LG P S +E
Sbjct: 493 PQQVSLPADFEAQRVLCGVDCSMIMSTQHQILACGNNRFNKLGLDKVSGTEEPSSFCQVE 552
Query: 267 EV-------------GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPR 313
EV +V I G ++ +AVT G ++FGS + LG + P
Sbjct: 553 EVHLFQLVQSAPLNTEKIVYIDIGTAHSVAVTEKGQCFTFGSNQHGQLGCSHRRSSRVP- 611
Query: 314 AIQTFRRKGIHVVRVSA-GDEHVVALDSSGYV 344
++ G+ + ++A GD +A+ + G V
Sbjct: 612 ----YQVSGLQGITMAACGDAFTLAIGAEGEV 639
Score = 48.9 bits (115), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 95/235 (40%), Gaps = 37/235 (15%)
Query: 106 IVETSAGN--MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA 162
IVE G +Q++ G H L ++N VFS G G LG + + +++ P+
Sbjct: 443 IVEALLGYELVQVSCGASHVLAVTNEREVFSWGRGDNGRLGLATQDSHNCP-QQVSLPAD 501
Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDN----------------SSFCCGHRDTNRPIFR 206
+V + + + Q+ CG+N SSFC +
Sbjct: 502 FEAQRVLCGVDCSMIMSTQHQILACGNNRFNKLGLDKVSGTEEPSSFC--------QVEE 553
Query: 207 PRLVEALKGVPCKQ-----VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 261
L + ++ P + G + +T +G T GSN HGQLG P
Sbjct: 554 VHLFQLVQSAPLNTEKIVYIDIGTAHSVAVTEKGQCFTFGSNQHGQLGCSHRRSSRVPYQ 613
Query: 262 IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
++ L+ + A G ++ LA+ G VY++G G+ LG E+ D P+ +Q
Sbjct: 614 VSGLQ---GITMAACGDAFTLAIGAEGEVYTWGKGARGRLGRKEE-DFGIPKPVQ 664
>sp|Q9UGK8|SRGEF_HUMAN Secretion-regulating guanine nucleotide exchange factor OS=Homo
sapiens GN=SERGEF PE=1 SV=2
Length = 458
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 76/146 (52%), Gaps = 8/146 (5%)
Query: 158 NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSS--FCCGHRDTNRPIFRPRLVEALKG 215
+F V +++ H+A V G +F CG N GH + + P F P ++L G
Sbjct: 44 DFCKPRSVRRITGGGGHSAVVTDGGDLFVCGLNKDGQLGLGHTE-DIPYFTP--CKSLFG 100
Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQI 274
P +QV G +FT LT G V +CGSN+ GQLG R P++I +E VV I
Sbjct: 101 CPIQQVACGWDFTIMLTENGQVLSCGSNSFGQLGVPHGPRRCVVPQAIELHKE--KVVCI 158
Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFC 300
AAG + +A T +G+V+ +G+G C
Sbjct: 159 AAGLRHAVAATASGIVFQWGTGLASC 184
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 89/191 (46%), Gaps = 16/191 (8%)
Query: 115 QITTGRYHTLLIS-NSSVFSCGSSLCGVLG--HGPETTQCVSFTRINFPSAAHVVQVSAS 171
Q+ G T++++ N V SCGS+ G LG HGP +CV I VV ++A
Sbjct: 105 QVACGWDFTIMLTENGQVLSCGSNSFGQLGVPHGPR--RCVVPQAIEL-HKEKVVCIAAG 161
Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHR---DTNRPIF----RPRLVEALKGVPCKQVTAG 224
HA SG VF G + CG R P+F P V L+ V AG
Sbjct: 162 LRHAVAATASGIVFQWGTGLA-SCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAG 220
Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYMLA 283
+ + LT G V+ GSN HGQL + + P P+ I A + V I +G ++++A
Sbjct: 221 SDHSASLTDAGEVYVWGSNKHGQLAN-EAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVA 279
Query: 284 VTGNGVVYSFG 294
T G ++++G
Sbjct: 280 QTETGKMFTWG 290
Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 70/133 (52%), Gaps = 17/133 (12%)
Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP--TP-KSI--APLEEVGSVVQ 273
+++T G + +T G + CG N GQLG G T D P TP KS+ P++ Q
Sbjct: 52 RRITGGGGHSAVVTDGGDLFVCGLNKDGQLGLGHTEDIPYFTPCKSLFGCPIQ------Q 105
Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLG--HGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
+A G + + +T NG V S GS S LG HG + + P+AI+ + K VV ++AG
Sbjct: 106 VACGWDFTIMLTENGQVLSCGSNSFGQLGVPHGPRRC-VVPQAIELHKEK---VVCIAAG 161
Query: 332 DEHVVALDSSGYV 344
H VA +SG V
Sbjct: 162 LRHAVAATASGIV 174
Score = 38.9 bits (89), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 104/265 (39%), Gaps = 35/265 (13%)
Query: 98 QSVE-HSSDIVETSAGNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFT 155
Q++E H +V +AG ++ + + SCG LC P T + FT
Sbjct: 146 QAIELHKEKVVCIAAGLRHAVAATASGIVFQWGTGLASCGRRLC------PGQTLPLFFT 199
Query: 156 -----RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV 210
R+ + + V A +H+A + +G+V+ G N + P+ P+ +
Sbjct: 200 AKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLANEAAFLPV--PQKI 257
Query: 211 EA--LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG------HGDTLDRPT---P 259
EA + + +G T G + T G +GQLG G L++ P
Sbjct: 258 EAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLGRKLETYEGWKLEKQDSFLP 317
Query: 260 KSIAPLEEVGS------VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPR 313
S P S +++ G + LA+ G GV YS+G + G G + + P+
Sbjct: 318 CSRPPNSMPSSPHCLTGATEVSCGSEHNLAIIG-GVCYSWGWNEHGMCGDGTEANVWAPK 376
Query: 314 AIQTFRRKGIHVVRVSAGDEHVVAL 338
+Q +V AG H +AL
Sbjct: 377 PVQALLSSSGLLVGCGAG--HSLAL 399
Score = 31.6 bits (70), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 45/105 (42%), Gaps = 2/105 (1%)
Query: 243 NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
N++GQLG G D P+ + + SV +I G + VT G ++ G + LG
Sbjct: 23 NSYGQLGLGHKEDVLLPQQLNDFCKPRSVRRITGGGGHSAVVTDGGDLFVCGLNKDGQLG 82
Query: 303 HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSLC 347
G H E P G + +V+ G + + L +G V C
Sbjct: 83 LG--HTEDIPYFTPCKSLFGCPIQQVACGWDFTIMLTENGQVLSC 125
>sp|Q9P258|RCC2_HUMAN Protein RCC2 OS=Homo sapiens GN=RCC2 PE=1 SV=2
Length = 522
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 104/237 (43%), Gaps = 32/237 (13%)
Query: 122 HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--ENHAAFV 178
H+LLI+ ++S G + G LGHG T+ V R+ +H V VSA+ NH +
Sbjct: 161 HSLLITTEGKLWSWGRNEKGQLGHG--DTKRVEAPRL-IEGLSHEVIVSAACGRNHTLAL 217
Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
++G VF G+N G + + P + G P ++ G F+ + +G+++
Sbjct: 218 TETGSVFAFGENKMGQLGLGNQTDAVPSPAQI-MYNGQPITKMACGAEFSMIMDCKGNLY 276
Query: 239 TCGSNTHGQLGHGDT------------------------LDRPTPKSIAPLEEVGSVVQI 274
+ G +GQLGH +++ I P+ V V +
Sbjct: 277 SFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNV-VVRDV 335
Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
A G ++ L + V+S+G G LGH EQ DE+ PR ++ F G ++ AG
Sbjct: 336 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIYAG 392
Score = 32.0 bits (71), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA--GDEHVV 336
++ L +T G ++S+G LGHG+ PR I+ H V VSA G H +
Sbjct: 160 AHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLS----HEVIVSAACGRNHTL 215
Query: 337 ALDSSGYV 344
AL +G V
Sbjct: 216 ALTETGSV 223
>sp|Q3MHW0|SRGEF_BOVIN Secretion-regulating guanine nucleotide exchange factor OS=Bos
taurus GN=SERGEF PE=2 SV=1
Length = 464
Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 86/170 (50%), Gaps = 6/170 (3%)
Query: 129 SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
+++F+ G++ G LG G + + +F + + +++ H+A V G +F CG
Sbjct: 15 AALFAWGANSYGQLGLGHKEDVLSAQQLSDFCKSGCIKRITGGGGHSAVVTDEGSLFVCG 74
Query: 189 DNSSFCCGHRDTNRPI-FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
N G T + F P ++L G +QV G +FT LT G V +CGSN+ GQ
Sbjct: 75 LNKDGQLGLGHTEEVLYFTP--CKSLLGCAIQQVACGWDFTIILTENGQVLSCGSNSFGQ 132
Query: 248 LGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
LG R P++I L E VV IAAG + LA T +G V+ +G+G
Sbjct: 133 LGVPHGPRRCVIPQAIELLRE--KVVSIAAGLRHALAATASGTVFQWGTG 180
Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 101/251 (40%), Gaps = 32/251 (12%)
Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLG--HGPETTQCVSFTRINFPSAAHVVQVSA 170
Q+ G T++++ N V SCGS+ G LG HGP +CV I VV ++A
Sbjct: 104 QQVACGWDFTIILTENGQVLSCGSNSFGQLGVPHGPR--RCVIPQAIEL-LREKVVSIAA 160
Query: 171 SENHAAFVLQSGQVFTCG-----DNSSFCCGHRDTNRPIF----RPRLVEALKGVPCKQV 221
HA SG VF G C G P+F P V L+ V
Sbjct: 161 GLRHALAATASGTVFQWGTGLASSGRRLCPGQ---TLPLFLTAKEPSTVTGLENSQAVCV 217
Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
AG + + LT G ++ GSN HGQL + A + + + +G +++
Sbjct: 218 LAGSDHSASLTDAGELYVWGSNKHGQLASQAAFLLLPQRIEARCFQNEKIAAVWSGWTHL 277
Query: 282 LAVTGNGVVYSFGSGSNFCLG------HGEQHDELQPRAIQTFRRKGIH--------VVR 327
+A T G V+++G LG G + ++ P + +KG
Sbjct: 278 VAQTVTGKVFTWGRADYGQLGRTVETREGWESEKQDPSLPGSGPQKGTPSCLPCLTGATE 337
Query: 328 VSAGDEHVVAL 338
+S G EH +A+
Sbjct: 338 ISCGSEHNLAV 348
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 106/242 (43%), Gaps = 20/242 (8%)
Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
+IT G H+ ++++ S+F CG + G LG G T + + FT + QV+ +
Sbjct: 53 RITGGGGHSAVVTDEGSLFVCGLNKDGQLGLG-HTEEVLYFTPCKSLLGCAIQQVACGWD 111
Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
+ ++GQV +CG NS G R P+ +E L+ + AGL T
Sbjct: 112 FTIILTENGQVLSCGSNSFGQLGVPHGPRRCVIPQAIELLR-EKVVSIAAGLRHALAATA 170
Query: 234 RGHVHTCGS---NTHGQLGHGDTLD----RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
G V G+ ++ +L G TL P ++ LE +V + AG + ++T
Sbjct: 171 SGTVFQWGTGLASSGRRLCPGQTLPLFLTAKEPSTVTGLENSQAVC-VLAGSDHSASLTD 229
Query: 287 NGVVYSFGSGSNFCLGHGEQHDE----LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
G +Y +GS HG+ + L P+ I+ + + V +G H+VA +G
Sbjct: 230 AGELYVWGSNK-----HGQLASQAAFLLLPQRIEARCFQNEKIAAVWSGWTHLVAQTVTG 284
Query: 343 YV 344
V
Sbjct: 285 KV 286
>sp|Q8BK67|RCC2_MOUSE Protein RCC2 OS=Mus musculus GN=Rcc2 PE=2 SV=1
Length = 520
Score = 69.7 bits (169), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 103/235 (43%), Gaps = 28/235 (11%)
Query: 122 HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
H+LLI+ ++S G + G LGHG +T + + I S +V + NH +
Sbjct: 159 HSLLITTEGKLWSWGRNEKGQLGHG-DTKRVEAPRLIEALSHEAIVLAACGRNHTLALTD 217
Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
+G VF G+N G + + P + G P ++ G F+ + +G++++
Sbjct: 218 TGSVFAFGENKMGQLGLGNQTDAVPSPAQI-MYNGQPITKMACGAEFSMLMDCKGNLYSF 276
Query: 241 GSNTHGQLGH---GDTLDRP---------TPKSIA------------PLEEVGSVVQIAA 276
G +GQLGH G + R P+ +A P+ V V +A
Sbjct: 277 GCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNV-VVRDVAC 335
Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
G ++ L + V+S+G G LGH EQ DE+ PR ++ F G ++ AG
Sbjct: 336 GANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGATQIYAG 390
Score = 33.1 bits (74), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
++ L +T G ++S+G LGHG+ PR I+ + I V + G H +AL
Sbjct: 158 AHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAI--VLAACGRNHTLAL 215
Query: 339 DSSGYV 344
+G V
Sbjct: 216 TDTGSV 221
>sp|Q52KW8|RCC2_XENLA Protein RCC2 homolog OS=Xenopus laevis GN=rcc2 PE=2 SV=1
Length = 513
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 98/241 (40%), Gaps = 40/241 (16%)
Query: 122 HTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH------VVQVSASENH 174
H+LLI+ ++S G + G LGHG RI+ P V + NH
Sbjct: 152 HSLLITVEGKLWSWGRNDKGQLGHG-------DIKRIDVPKLIESLKGEVFVHAACGRNH 204
Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
+ ++G V+ G+N G + + P + G P +V G F+ + +
Sbjct: 205 TLALTENGSVYAFGENKMGQLGLGNKTDAVPSPAQI-LYNGQPITKVACGAEFSMIMDCK 263
Query: 235 GHVHTCGSNTHGQLGHGDT------------------------LDRPTPKSIAPLEEVGS 270
G++++ G +GQLGH +++ I P+ V
Sbjct: 264 GNLYSFGCPEYGQLGHNSDGKYIARAQRIEYDCELIARRIAIFIEKTKDGQILPVPNV-V 322
Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
V IA G ++ L + V+S+G G LGH EQ DE+ PR ++ F G ++ A
Sbjct: 323 VRDIACGINHSLILDSQKRVFSWGFGGYGRLGHSEQRDEMVPRLVKLFDFPGRGAAQIYA 382
Query: 331 G 331
G
Sbjct: 383 G 383
>sp|Q9P2D0|IBTK_HUMAN Inhibitor of Bruton tyrosine kinase OS=Homo sapiens GN=IBTK PE=1
SV=3
Length = 1353
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 107/232 (46%), Gaps = 24/232 (10%)
Query: 129 SSVFSCGSSLCGVLGHGPETTQ-----CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 183
+ V++ G + LGHG + ++ F+R S ++ QV + H+ F+ Q GQ
Sbjct: 142 TDVYTWGDNTNFTLGHGSQNSKHHPELVDLFSR----SGIYIKQVVLCKFHSVFLSQKGQ 197
Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
V+TCG GH D + PRLVE L G C QV A + T LT G V+T G N
Sbjct: 198 VYTCGHGPGGRLGHGD-EQTCLVPRLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTFGLN 256
Query: 244 THGQLGHGDTLDRPT----PKSI-APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG--SG 296
QLG + P+ P+ I A + +++ +AAG + + T VY+ G G
Sbjct: 257 IFHQLG---IIPPPSSCNVPRQIQAKYLKGRTIIGVAAGRFHTVLWTREA-VYTMGLNGG 312
Query: 297 SNFCL--GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSL 346
CL +GE+ PR + K I + V+A D V + + G + L
Sbjct: 313 QLGCLLDPNGEKC-VTAPRQVSALHHKDIALSLVAASDGATVCVTTRGDIYL 363
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSLC 347
VY++G +NF LGHG Q+ + P + F R GI++ +V H V L G V C
Sbjct: 144 VYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTC 201
Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 66/138 (47%), Gaps = 6/138 (4%)
Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
Q+ ++H++ +S V++CG G LGHG E T C+ + + + QV+A+++
Sbjct: 181 QVVLCKFHSVFLSQKGQVYTCGHGPGGRLGHGDEQT-CLVPRLVEGLNGHNCSQVAAAKD 239
Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA--LKGVPCKQVTAGLNFTGFL 231
H + + G V+T G N G PR ++A LKG V AG F L
Sbjct: 240 HTVVLTEDGCVYTFGLNIFHQLGIIPPPSSCNVPRQIQAKYLKGRTIIGVAAG-RFHTVL 298
Query: 232 TIRGHVHTCGSNTHGQLG 249
R V+T G N GQLG
Sbjct: 299 WTREAVYTMGLNG-GQLG 315
>sp|P28745|RCC1_SCHPO Protein pim1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=pim1 PE=1 SV=2
Length = 539
Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 86/184 (46%), Gaps = 25/184 (13%)
Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCG----HRDTNRPIFRPRLVEALKGVPCK 219
+++ V A H+ + G+V+ G N + CG + I +P LV+AL+G K
Sbjct: 280 NIISVGAGSYHSFAIDNKGRVYAWGLNITRQCGIEVEDEEEGAVITKPTLVDALEGYNVK 339
Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE------------ 267
+T G + T L G V G + QLG D P+++ E+
Sbjct: 340 SITGGEHHTLALLEDGRVLAWGRDDRHQLG---IPDNALPETVVKDEKGNNYYLSTPTII 396
Query: 268 --VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF-RRKGIH 324
+ +V+Q+ G + LAVT +G VYS+GS N+ +G G+ +++ A+ T R K I
Sbjct: 397 PGLTNVIQVVCGTHHNLAVTSDGKVYSWGSAENYEVGQGDNDEDV---AVPTLVRSKAIK 453
Query: 325 VVRV 328
V +
Sbjct: 454 EVAI 457
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 102/244 (41%), Gaps = 44/244 (18%)
Query: 130 SVFSCGSSLCGVLGHGPETTQCVSFTRIN---FPSAAHVVQVSASENHAAFVLQSGQVFT 186
+V+ GS LG G E V R+N VV ++ H+A + G+V+T
Sbjct: 72 NVYVFGSGSMNELGMGEEEMDVVYRPRLNPILSTDKVGVVDLAVGGMHSAALSHDGRVYT 131
Query: 187 CGDNSSFCCG-----HRDTNRPIFRPRLVEALKGVPCK-----------QVTAGLNFTGF 230
G N + G +D N L+E G P K +V N T
Sbjct: 132 WGVNDDYALGRLTKDQKDENGDKVDNDLLE---GTPSKVEGALSHLRVTKVICSDNLTAA 188
Query: 231 LTIRGHVHTCGSN--THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
+T G T G+ + G LG+ D+ R + L E+ Q+A G +++A+T G
Sbjct: 189 ITDNGCCFTWGTFRCSDGVLGYSDSQKRTAEPTQMRLPEI---CQLATGTDHIIALTTTG 245
Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI--------HVVRVSAGDEHVVALDS 340
VY++G+G F LG R ++ R +G+ +++ V AG H A+D+
Sbjct: 246 KVYTWGNGQQFQLGR---------RMLERRRLQGLTPQPLALKNIISVGAGSYHSFAIDN 296
Query: 341 SGYV 344
G V
Sbjct: 297 KGRV 300
>sp|Q5DX34|RPGRH_CAEEL X-linked retinitis pigmentosa GTPase regulator homolog
OS=Caenorhabditis elegans GN=glo-4 PE=1 SV=1
Length = 1392
Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 113/272 (41%), Gaps = 49/272 (18%)
Query: 115 QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG--PETTQCVSFTRINFPSAAHVVQVSAS 171
+I G++H+ I S+ S+++ G + G LGHG + Q V TR+N V Q++
Sbjct: 831 KIACGQFHSAFICSDGSLWTFGWGVWGQLGHGGRNNSNQLVP-TRVN-GLICKVTQIACG 888
Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF--RPRLVEALKGVPCKQVTAGLNFTG 229
H + +G+V CG S G D + +F P + L+ + + +
Sbjct: 889 RAHTVVLTDTGRVLVCGSGSYGQMGVDDDIKKVFAFTPLPLGPLR---VRDIATHYYHSI 945
Query: 230 FLTIRGHVHTCGSNTH--------------GQLGHGDTLDRPTPKSIA------------ 263
+T V G N QL + + P+P +
Sbjct: 946 CITEDNRVFEWGRNPQELKMRMFVMKKIRSAQLKNTEDPSSPSPSTNGSTPRVNLNLPAE 1005
Query: 264 -PLEEVG----------SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQP 312
P E++G ++V +A G S+ +T G +Y++G G ++ LGHG +++ ++P
Sbjct: 1006 IPREDLGLREVKHFLDGNIVSVACGLSHSALITSEGTLYTWGKGLDYQLGHGNKNERMEP 1065
Query: 313 RAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
Q F G V VS G+ H +A G V
Sbjct: 1066 H--QVFEPNGAKWVNVSLGNNHTIASTDDGSV 1095
Score = 45.4 bits (106), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 88/222 (39%), Gaps = 42/222 (18%)
Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
QI GR HT++++++ V CGS G +G + + +FT + V ++
Sbjct: 884 QIACGRAHTVVLTDTGRVLVCGSGSYGQMGVDDDIKKVFAFTPLPL-GPLRVRDIATHYY 942
Query: 174 HAAFVLQSGQVFTCGDN-------------------------------SSFCCGHRDTNR 202
H+ + + +VF G N ++ + N
Sbjct: 943 HSICITEDNRVFEWGRNPQELKMRMFVMKKIRSAQLKNTEDPSSPSPSTNGSTPRVNLNL 1002
Query: 203 PIFRPRLVEALKGVP------CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR 256
P PR L+ V V GL+ + +T G ++T G QLGHG+ +R
Sbjct: 1003 PAEIPREDLGLREVKHFLDGNIVSVACGLSHSALITSEGTLYTWGKGLDYQLGHGNKNER 1062
Query: 257 PTPKSIAPLEEVGS-VVQIAAGPSYMLAVTGNGVVYSFGSGS 297
P + E G+ V ++ G ++ +A T +G V+++G
Sbjct: 1063 MEPHQV--FEPNGAKWVNVSLGNNHTIASTDDGSVFAWGKND 1102
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 93/206 (45%), Gaps = 25/206 (12%)
Query: 101 EHSSDIVETSAGNMQ-ITTGRYHTLLISNSSVFSCGSS----LCGVLGHGPETTQCVSFT 155
+H ++E G + I G H L++S+S S CGV GH + + +
Sbjct: 765 QHLPRVLEYPGGRPRAIACGAEHILVLSSSGQLSAWGGNRFGQCGV-GH---SFRIANLH 820
Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH--RDTNRPIFRPRLVEAL 213
+++ A + +++ + H+AF+ G ++T G GH R+ + + R+
Sbjct: 821 QVDGDWPA-IEKIACGQFHSAFICSDGSLWTFGWGVWGQLGHGGRNNSNQLVPTRV---- 875
Query: 214 KGVPCK--QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP---TPKSIAPLEEV 268
G+ CK Q+ G T LT G V CGS ++GQ+G D + + TP + PL
Sbjct: 876 NGLICKVTQIACGRAHTVVLTDTGRVLVCGSGSYGQMGVDDDIKKVFAFTPLPLGPLR-- 933
Query: 269 GSVVQIAAGPSYMLAVTGNGVVYSFG 294
V IA + + +T + V+ +G
Sbjct: 934 --VRDIATHYYHSICITEDNRVFEWG 957
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 67/147 (45%), Gaps = 16/147 (10%)
Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
PR++E G P + + G L+ G + G N GQ G G + IA L
Sbjct: 768 PRVLEYPGGRP-RAIACGAEHILVLSSSGQLSAWGGNRFGQCGVGHSF------RIANLH 820
Query: 267 EVG----SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
+V ++ +IA G + + +G +++FG G LGHG +++ Q + R G
Sbjct: 821 QVDGDWPAIEKIACGQFHSAFICSDGSLWTFGWGVWGQLGHGGRNNSNQ---LVPTRVNG 877
Query: 323 I--HVVRVSAGDEHVVALDSSGYVSLC 347
+ V +++ G H V L +G V +C
Sbjct: 878 LICKVTQIACGRAHTVVLTDTGRVLVC 904
Score = 35.4 bits (80), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 37/86 (43%), Gaps = 1/86 (1%)
Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
++V V+ +H+A + G ++T G + GH + N + P V G V+
Sbjct: 1023 NIVSVACGLSHSALITSEGTLYTWGKGLDYQLGHGNKNERM-EPHQVFEPNGAKWVNVSL 1081
Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLG 249
G N T T G V G N GQ G
Sbjct: 1082 GNNHTIASTDDGSVFAWGKNDFGQCG 1107
Score = 34.7 bits (78), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 46/102 (45%), Gaps = 9/102 (8%)
Query: 97 LQSVEHSSDIVETSAGNM-QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSF 154
L+ V+H D GN+ + G H+ LI S ++++ G L LGHG + + +
Sbjct: 1013 LREVKHFLD------GNIVSVACGLSHSALITSEGTLYTWGKGLDYQLGHGNKNER-MEP 1065
Query: 155 TRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCG 196
++ P+ A V VS NH G VF G N CG
Sbjct: 1066 HQVFEPNGAKWVNVSLGNNHTIASTDDGSVFAWGKNDFGQCG 1107
Score = 34.3 bits (77), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG--DTLDRPTPKSIAPLEEVGSVVQIAA 276
+++ G + F+ G + T G GQLGHG + ++ P + L + V QIA
Sbjct: 830 EKIACGQFHSAFICSDGSLWTFGWGVWGQLGHGGRNNSNQLVPTRVNGL--ICKVTQIAC 887
Query: 277 GPSYMLAVTGNGVVYSFGSGS 297
G ++ + +T G V GSGS
Sbjct: 888 GRAHTVVLTDTGRVLVCGSGS 908
>sp|Q86SG6|NEK8_HUMAN Serine/threonine-protein kinase Nek8 OS=Homo sapiens GN=NEK8 PE=1
SV=1
Length = 692
Score = 65.5 bits (158), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 86/191 (45%), Gaps = 11/191 (5%)
Query: 164 HVVQVSASENHAAFVLQSGQVFTC------GDNSSFCCGHRDTNRPIFRPRLVEALKGVP 217
VVQV+A A V +SG++ S G + +P F R +E GV
Sbjct: 333 EVVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGGSLLPGAVEQPQPQFISRFLEGQSGVT 392
Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAA 276
K V G FT LT RG + T GS ++G LGHG D P + L +G +VQ+A
Sbjct: 393 IKHVACGDFFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQPTIVEAL--LGYEMVQVAC 450
Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
G S++LA++ ++++G G + LG G + P+ Q G RV G + +
Sbjct: 451 GASHVLALSTERELFAWGRGDSGRLGLGTRESHSCPQ--QVPMPPGQEAQRVVCGIDSSM 508
Query: 337 ALDSSGYVSLC 347
L G C
Sbjct: 509 ILTVPGQALAC 519
Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 92/228 (40%), Gaps = 21/228 (9%)
Query: 106 IVETSAG--NMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGP-ETTQCVSFTRINFPS 161
IVE G +Q+ G H L +S +F+ G G LG G E+ C ++ P
Sbjct: 436 IVEALLGYEMVQVACGASHVLALSTERELFAWGRGDSGRLGLGTRESHSCPQ--QVPMPP 493
Query: 162 AAHVVQVSASENHAAFVLQSGQVFTCGDN--SSFCCGHRDT-NRPIFRPRLVEALKGV-- 216
+V + + + GQ CG N + H P+ ++ EAL
Sbjct: 494 GQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLDHLSLGEEPVPHQQVEEALSFTLL 553
Query: 217 --------PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 268
P + G + +T G +T GSN HGQLG P + LE +
Sbjct: 554 GSAPLDQEPLLSIDLGTAHSAAVTASGDCYTFGSNQHGQLGTNTRRGSRAPCKVQGLEGI 613
Query: 269 GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
+ +A G ++ +A+ VYS+G G+ LG ++ L PR +Q
Sbjct: 614 -KMAMVACGDAFTVAIGAESEVYSWGKGARGRLGRRDEDAGL-PRPVQ 659
>sp|Q8NDN9|RCBT1_HUMAN RCC1 and BTB domain-containing protein 1 OS=Homo sapiens GN=RCBTB1
PE=2 SV=1
Length = 531
Score = 65.5 bits (158), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 91/219 (41%), Gaps = 4/219 (1%)
Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQ 183
+ N VF G + LG G + V ++ + +S S H + G
Sbjct: 37 VTDNDEVFVFGLNYSNCLGTGDNQSTLVP-KKLEGLCGKKIKSLSYGSGPHVLLSTEDGV 95
Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
V+ G N G+ TN+ I ++ L +V G + + L G V G N
Sbjct: 96 VYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYN 155
Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 303
GQ+G G T ++PTP+ + + VV IA G + +AV NG VY +G N LG
Sbjct: 156 NCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGL 215
Query: 304 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
G ++L P + + V ++ G H +AL G
Sbjct: 216 GNNGNQLTPVRVAALHS--VCVNQIVCGYAHTLALTDEG 252
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 86/184 (46%), Gaps = 6/184 (3%)
Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
+++ G +H++ L ++ VF+ G + CG +G G Q N VV ++ +
Sbjct: 131 VEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQ 190
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
+ VL +G+V+ G N + G N P V AL V Q+ G T LT
Sbjct: 191 TSSMAVLDNGEVYGWGYNGNGQLG-LGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALT 249
Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS--YMLAVTGNGVV 290
G ++ G+NT+GQLG G+ + +P I + E VV+IAA S A T G V
Sbjct: 250 DEGLLYAWGANTYGQLGTGNKNNLLSPAHI--MVEKERVVEIAACHSAHTSAAKTQGGHV 307
Query: 291 YSFG 294
Y +G
Sbjct: 308 YMWG 311
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 79/167 (47%), Gaps = 8/167 (4%)
Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
A V SASE A +V + +VF G N S C G D N+ P+ +E L G K ++
Sbjct: 24 ACVFGTSASE--ALYVTDNDEVFVFGLNYSNCLGTGD-NQSTLVPKKLEGLCGKKIKSLS 80
Query: 223 AGLNFTGFL-TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
G L T G V+ G N + QLG+G T P + + VV++A G +
Sbjct: 81 YGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHS 140
Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 328
+A+ +G V+++G + +G G ++ PR + +H+ RV
Sbjct: 141 MALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNC----LHIKRV 183
>sp|Q6NXM2|RCBT1_MOUSE RCC1 and BTB domain-containing protein 1 OS=Mus musculus GN=Rcbtb1
PE=2 SV=1
Length = 531
Score = 65.1 bits (157), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 93/227 (40%), Gaps = 4/227 (1%)
Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHA 175
T+ + N VF G + LG G + V ++ + +S S H
Sbjct: 29 TSANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTLVP-KKLEALCGKKIKSLSYGSGPHV 87
Query: 176 AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 235
+ G V+ G N G+ TN+ I ++ L +V G + + L G
Sbjct: 88 LLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADG 147
Query: 236 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
+ G N GQ+G G T ++PTP+ + VV IA G + +AV +G VY +G
Sbjct: 148 ELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGY 207
Query: 296 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
N LG G ++L P + G+ V ++ G H +AL G
Sbjct: 208 NGNGQLGLGNNGNQLTPVRVAALH--GMCVNQIVCGYAHTLALTDEG 252
Score = 62.8 bits (151), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 86/184 (46%), Gaps = 6/184 (3%)
Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
+++ G +H++ L ++ +F+ G + CG +G G Q N VV ++ +
Sbjct: 131 IEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQ 190
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
+ VL SG+V+ G N + G N P V AL G+ Q+ G T LT
Sbjct: 191 TSSMAVLDSGEVYGWGYNGNGQLG-LGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALT 249
Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS--YMLAVTGNGVV 290
G ++ G+NT+GQLG G + +P I + E V++IAA S A T G V
Sbjct: 250 DEGLLYAWGANTYGQLGTGSKNNLLSPTQI--MVEKERVIEIAACHSTHTSAAKTQGGHV 307
Query: 291 YSFG 294
Y +G
Sbjct: 308 YMWG 311
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 82/175 (46%), Gaps = 3/175 (1%)
Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
S N A +V + +VF G N S C G D N+ P+ +EAL G K ++ G
Sbjct: 30 SANEAIYVTDNDEVFVFGLNYSNCLGTGD-NQSTLVPKKLEALCGKKIKSLSYGSGPHVL 88
Query: 231 LTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
LT G V+ G N + QLG+G T P + + V+++A G + +A+ +G
Sbjct: 89 LTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGE 148
Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
++++G + +G G ++ PR + VV ++ G +A+ SG V
Sbjct: 149 LFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTK-RVVNIACGQTSSMAVLDSGEV 202
>sp|Q7ZZC8|NEK9_XENLA Serine/threonine-protein kinase Nek9 OS=Xenopus laevis GN=nek9 PE=2
SV=1
Length = 944
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 125/283 (44%), Gaps = 31/283 (10%)
Query: 75 SRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSC 134
R E+L R +W+R + +E ++ S N + TG T+ + +V +
Sbjct: 277 KRPTADEILERPILSWRR-----RDMEEKVSMLNRS--NKKPRTG---TVTEAPIAVVTS 326
Query: 135 GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC-----GD 189
SS V G G T Q + F QV A + H A V +++T G
Sbjct: 327 RSSEVYVWGGGKTTPQKLDV----FKGGWRARQVCAGDAHFAVVTVEKELYTWVNMQGGS 382
Query: 190 NSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 248
GH D R +R P+ VE L+G ++V+ G +FT +T G +++ GS+ +G L
Sbjct: 383 KLHGQLGHGD--RASYRQPKHVEKLQGKSVQKVSCGSDFTVCITDEGQLYSFGSDYYGCL 440
Query: 249 G----HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG 304
G G + P E V Q++ G S+++A+T + VYS+G G LG
Sbjct: 441 GVNQSAGSEVLEPLLVDFFLNEPVD---QVSCGDSHIMALTRSKSVYSWGCGEYGRLGLD 497
Query: 305 EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSLC 347
+ D P+ ++ ++G+ +V V G + L +G V C
Sbjct: 498 SEDDVYSPQKVEV--QRGLCIVNVCCGSDGSFLLTLTGKVLAC 538
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 108/249 (43%), Gaps = 26/249 (10%)
Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLG-HGPETTQCVSFTRINFPSAAHVVQVSASE 172
+++ G T+ I++ ++S GS G LG + ++ + ++F V QVS +
Sbjct: 412 KVSCGSDFTVCITDEGQLYSFGSDYYGCLGVNQSAGSEVLEPLLVDFFLNEPVDQVSCGD 471
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
+H + +S V++ G CG D+ ++ P+ VE +G+ V G +
Sbjct: 472 SHIMALTRSKSVYSWG------CGEYGRLGLDSEDDVYSPQKVEVQRGLCIVNVCCGSDG 525
Query: 228 TGFLTIRGHVHTCGSNTHGQLG----------HGDTLDRPTPKSIAPLEEVG--SVVQIA 275
+ LT+ G V CG N H +LG H + P S+ +++ + I+
Sbjct: 526 SFLLTLTGKVLACGLNEHNKLGLNQYTAGIINHEAFQEVPYTTSLTLAKQLSFYKIRSIS 585
Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
G ++ A+ G + +FGS LG G+ L + G V+RVS GDE
Sbjct: 586 PGRTHTAAIDERGRLLTFGSNKCGQLGVGDYRKHLGINLLGG-PLGGKQVIRVSCGDEFT 644
Query: 336 VALDSSGYV 344
A + ++
Sbjct: 645 TAATADNHI 653
>sp|Q9NB71|HIW_DROME E3 ubiquitin-protein ligase highwire OS=Drosophila melanogaster
GN=hiw PE=1 SV=2
Length = 5233
Score = 62.4 bits (150), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 3/106 (2%)
Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
P+L++ P QV GL+ T LT+ G V+T GSN +GQLG GD P + +
Sbjct: 957 PQLLQLTSSSPVVQVACGLHHTVVLTLAGEVYTFGSNQYGQLGSGDLQPVSGPVRV---Q 1013
Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQP 312
G++ Q+AAG ++ + +T G+VY+FG+ LG L+P
Sbjct: 1014 VPGAISQVAAGSNHTVLLTSKGMVYTFGNYQKGQLGRLPSDYGLKP 1059
Score = 45.4 bits (106), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 57/121 (47%), Gaps = 5/121 (4%)
Query: 142 LGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN 201
L P ++ + S++ VVQV+ +H + +G+V+T G N G D
Sbjct: 945 LDKDPPRVAPLAPQLLQLTSSSPVVQVACGLHHTVVLTLAGEVYTFGSNQYGQLGSGDL- 1003
Query: 202 RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH--GDTLDRPTP 259
+P+ P V+ + QV AG N T LT +G V+T G+ GQLG D +P P
Sbjct: 1004 QPVSGPVRVQVPGAI--SQVAAGSNHTVLLTSKGMVYTFGNYQKGQLGRLPSDYGLKPPP 1061
Query: 260 K 260
+
Sbjct: 1062 Q 1062
Score = 38.5 bits (88), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 47/97 (48%), Gaps = 10/97 (10%)
Query: 254 LDRPTPK--SIAP----LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 307
LD+ P+ +AP L VVQ+A G + + +T G VY+FGS LG G
Sbjct: 945 LDKDPPRVAPLAPQLLQLTSSSPVVQVACGLHHTVVLTLAGEVYTFGSNQYGQLGSG--- 1001
Query: 308 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
+LQP + + + +V+AG H V L S G V
Sbjct: 1002 -DLQPVSGPVRVQVPGAISQVAAGSNHTVLLTSKGMV 1037
>sp|Q6ZPR6|IBTK_MOUSE Inhibitor of Bruton tyrosine kinase OS=Mus musculus GN=Ibtk PE=1
SV=3
Length = 1352
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 107/234 (45%), Gaps = 28/234 (11%)
Query: 129 SSVFSCGSSLCGVLGHGPETTQ-----CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 183
+ V++ G + LGHG + ++ F+R S +V QV + H+ F+ Q GQ
Sbjct: 142 TEVYTWGDNTNFTLGHGSQNSKHHPELLDLFSR----SGVYVKQVVLCKFHSVFLSQKGQ 197
Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
V+TCG GH D + PRLVE L G C QV A + T LT G V+T G N
Sbjct: 198 VYTCGHGRGGRLGHGD-EQTCLVPRLVEGLSGHNCSQVAAAKDHTVVLTDDGCVYTFGLN 256
Query: 244 THGQLGHGDTLDRP----TPKSI-APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG-SGS 297
QLG + P P+ I A + +++ +AAG + + T VY+ G +G
Sbjct: 257 MFHQLG---IIPPPASCNVPRQIQAKYLKGRTIIGVAAGRFHTVLWTREA-VYTLGLNGG 312
Query: 298 NFCLGH-----GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSL 346
LGH GE+ PR + K I V V+A D V + + G + L
Sbjct: 313 Q--LGHLLDPNGEKC-VTTPRQVSALHHKDIAVSLVAASDGATVCVTTRGDIYL 363
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 6/101 (5%)
Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML-AVTGNGVVYSFGSGSNFCLGHGEQ 306
L HG +L + ++PL+ + + P++++ T VY++G +NF LGHG Q
Sbjct: 106 LKHGVSLYMQDKEGLSPLD-----LLMKDRPTHVVFKDTDPTEVYTWGDNTNFTLGHGSQ 160
Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSLC 347
+ + P + F R G++V +V H V L G V C
Sbjct: 161 NSKHHPELLDLFSRSGVYVKQVVLCKFHSVFLSQKGQVYTC 201
Score = 38.1 bits (87), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 84/187 (44%), Gaps = 15/187 (8%)
Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
Q+ ++H++ +S V++CG G LGHG E T C+ + S + QV+A+++
Sbjct: 181 QVVLCKFHSVFLSQKGQVYTCGHGRGGRLGHGDEQT-CLVPRLVEGLSGHNCSQVAAAKD 239
Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA--LKGVPCKQVTAGLNFTGFL 231
H + G V+T G N G PR ++A LKG V AG F L
Sbjct: 240 HTVVLTDDGCVYTFGLNMFHQLGIIPPPASCNVPRQIQAKYLKGRTIIGVAAG-RFHTVL 298
Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDR------PTPKSIAPLEEVGSVVQ-IAAGPSYMLAV 284
R V+T G N GQLGH LD TP+ ++ L V +AA + V
Sbjct: 299 WTREAVYTLGLNG-GQLGH--LLDPNGEKCVTTPRQVSALHHKDIAVSLVAASDGATVCV 355
Query: 285 TGNGVVY 291
T G +Y
Sbjct: 356 TTRGDIY 362
>sp|Q91ZR4|NEK8_MOUSE Serine/threonine-protein kinase Nek8 OS=Mus musculus GN=Nek8 PE=1
SV=1
Length = 698
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 90/191 (47%), Gaps = 11/191 (5%)
Query: 164 HVVQVSASENHAAFVLQSGQVFTC------GDNSSFCCGHRDTNRPIFRPRLVEALKGVP 217
VVQV+A A V +SG++ + G + +P F R +E GV
Sbjct: 339 EVVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGGTLLPGAVELPQPQFVSRFLEGQSGVT 398
Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAA 276
K V G FT LT RG + T GS ++G LGHG+ D P + L +G +VQ+A
Sbjct: 399 IKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGNLTDISQPTIVEAL--LGYEMVQVAC 456
Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
G S++LA++ +G ++++G G LG G + P+ + G RV G + +
Sbjct: 457 GASHVLALSTDGELFAWGRGDGGRLGLGTRESHNCPQQVPV--APGQEAQRVVCGIDSSM 514
Query: 337 ALDSSGYVSLC 347
L S G V C
Sbjct: 515 ILTSPGRVLAC 525
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 100/240 (41%), Gaps = 31/240 (12%)
Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH------VVQVSASENHAAFV 178
L + + GS G LGHG + T I+ P+ +VQV+ +H +
Sbjct: 412 LTDRGIIMTFGSGSNGCLGHG-------NLTDISQPTIVEALLGYEMVQVACGASHVLAL 464
Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
G++F G T P+ V G ++V G++ + LT G V
Sbjct: 465 STDGELFAWGRGDGGR-LGLGTRESHNCPQQVPVAPGQEAQRVVCGIDSSMILTSPGRVL 523
Query: 239 TCGSNTHGQLG--HGDTLDRP------------TPKSIAPLEEVGSVVQIAAGPSYMLAV 284
CGSN +LG H + P TP APL++ ++ + G ++ A+
Sbjct: 524 ACGSNRFNKLGLDHLSLDEEPVPYQQVEEALSFTPLGSAPLDQ-EPLLCVDLGTAHSAAI 582
Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
T +G Y+FGS + LG + P +Q +GI +V V+ GD VA+ + G V
Sbjct: 583 TASGDCYTFGSNQHGQLGTSSRRVSRAPCRVQGL--EGIKMVMVACGDAFTVAVGAEGEV 640
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 68/157 (43%), Gaps = 15/157 (9%)
Query: 173 NHAAFVLQSGQVFTCGDN--SSFCCGHRDTNR-PIFRPRLVEALKGVPCKQ--------- 220
+ + + G+V CG N + H + P+ ++ EAL P
Sbjct: 511 DSSMILTSPGRVLACGSNRFNKLGLDHLSLDEEPVPYQQVEEALSFTPLGSAPLDQEPLL 570
Query: 221 -VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
V G + +T G +T GSN HGQLG P + LE + +V +A G +
Sbjct: 571 CVDLGTAHSAAITASGDCYTFGSNQHGQLGTSSRRVSRAPCRVQGLEGI-KMVMVACGDA 629
Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
+ +AV G VYS+G G+ LG ++ L PR +Q
Sbjct: 630 FTVAVGAEGEVYSWGKGTRGRLGRRDEDAGL-PRPVQ 665
Score = 37.0 bits (84), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 64/151 (42%), Gaps = 19/151 (12%)
Query: 124 LLISNSSVFSCGSSLCGVLG-------HGP----ETTQCVSFTRINFPSAAH--VVQVSA 170
+L S V +CGS+ LG P + + +SFT + ++ V
Sbjct: 515 ILTSPGRVLACGSNRFNKLGLDHLSLDEEPVPYQQVEEALSFTPLGSAPLDQEPLLCVDL 574
Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTG 229
H+A + SG +T G N G ++R + R P V+ L+G+ V G FT
Sbjct: 575 GTAHSAAITASGDCYTFGSNQHGQLG--TSSRRVSRAPCRVQGLEGIKMVMVACGDAFTV 632
Query: 230 FLTIRGHVHTCGSNTHGQLGHGDT---LDRP 257
+ G V++ G T G+LG D L RP
Sbjct: 633 AVGAEGEVYSWGKGTRGRLGRRDEDAGLPRP 663
>sp|Q8TD19|NEK9_HUMAN Serine/threonine-protein kinase Nek9 OS=Homo sapiens GN=NEK9 PE=1
SV=2
Length = 979
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 107/239 (44%), Gaps = 23/239 (9%)
Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
R T+ + +V + +S V G G T Q + + S QV A H A V
Sbjct: 330 RSSTVTEAPIAVVTSRTSEVYVWGGGKSTPQKLDVIK----SGCSARQVCAGNTHFAVVT 385
Query: 180 QSGQVFTC-----GDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFLTI 233
+++T G GH D + +R P+ VE L+G +QV+ G +FT +T
Sbjct: 386 VEKELYTWVNMQGGTKLHGQLGHGD--KASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTD 443
Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLE----EVGSVVQIAAGPSYMLAVTGNG 288
G ++ GS+ +G +G +D+ P+ + P++ V Q++ G ++++ +T N
Sbjct: 444 EGQLYAFGSDYYGCMG----VDKVAGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNK 499
Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSLC 347
VYS+G G LG + D P+ + K + +V V G + L SG V C
Sbjct: 500 EVYSWGCGEYGRLGLDSEEDYYTPQKVDV--PKALIIVAVQCGCDGTFLLTQSGKVLAC 556
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 105/252 (41%), Gaps = 32/252 (12%)
Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLG----HGPETTQCVSFTRINFPSAAHVVQVS 169
Q++ G T+ +++ +++ GS G +G GPE + + ++NF + V QVS
Sbjct: 430 QVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPM---QLNFFLSNPVEQVS 486
Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVPCKQVTAG 224
+NH + ++ +V++ G CG D+ + P+ V+ K + V G
Sbjct: 487 CGDNHVVVLTRNKEVYSWG------CGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCG 540
Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLG----------HGDTLDRPTPKSIAPLEEVG--SVV 272
+ T LT G V CG N +LG H + P S +++ +
Sbjct: 541 CDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIR 600
Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
IA G ++ A+ G + +FG LG G L + G V+RVS GD
Sbjct: 601 TIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGG-PLGGKQVIRVSCGD 659
Query: 333 EHVVALDSSGYV 344
E +A ++
Sbjct: 660 EFTIAATDDNHI 671
>sp|P25183|RCC1_XENLA Regulator of chromosome condensation OS=Xenopus laevis GN=rcc1 PE=2
SV=1
Length = 424
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 59/116 (50%), Gaps = 10/116 (8%)
Query: 232 TIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
T+ G V T G GQLG G D ++R P + E++ VQ AAG + + + +G +
Sbjct: 38 TVGGQVLTLGQGDVGQLGLGEDIMERKKPALVTLTEDI---VQAAAGGMHTVCLGASGSI 94
Query: 291 YSFGSGSNFCLGH--GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
Y+FG LG E+ E+QP ++ + VV+VSAGD H AL G V
Sbjct: 95 YTFGCNDEGALGRDTSEEGSEMQPGKVELAEK----VVQVSAGDSHTAALTEDGRV 146
Score = 58.5 bits (140), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 110/242 (45%), Gaps = 20/242 (8%)
Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQC----VSFTRINFPSAAHVVQV 168
++I +G H +L++ + +++ G G LG PE R+ P H+
Sbjct: 181 IKIASGNDHLVLLTVDGDLYTSGCGEQGQLGRVPERFTNRGGRKGLERLLVPQCIHLKAK 240
Query: 169 SASENH-------AAF---VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
+ H A F V Q G V+ G ++ G ++T + + P+ + + K
Sbjct: 241 GSGRVHFQDVFCGAYFTFAVSQEGHVYGFGLSNYHQLGTKNT-QACYAPQNLTSFKNSTK 299
Query: 219 KQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
+ + G + T + G ++ G +G+LG G+ + + + P+ ++ + +A+
Sbjct: 300 SWIGFSGGQHHTVCVDSEGKAYSLGRAEYGRLGLGENAEEQSEPT--PIPDLPKINSVAS 357
Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
G S AV+ +G V+++G G+N LG GE+ D P + + V+ VS+G +H V
Sbjct: 358 GASVSYAVSTDGCVFAWGMGTNLQLGTGEEEDVWSPEQMTGKHLEDREVLSVSSGGQHTV 417
Query: 337 AL 338
L
Sbjct: 418 LL 419
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 109/262 (41%), Gaps = 37/262 (14%)
Query: 103 SSDIVETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS 161
+ DIV+ +AG M HT+ L ++ S+++ G + G LG + +
Sbjct: 72 TEDIVQAAAGGM-------HTVCLGASGSIYTFGCNDEGALGR-DTSEEGSEMQPGKVEL 123
Query: 162 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRL-VEALK 214
A VVQVSA ++H A + + G+VF G SF RD N P+ + + V+
Sbjct: 124 AEKVVQVSAGDSHTAALTEDGRVFVFG---SF----RDNNGVIGLLEPMKKSMVPVQVQI 176
Query: 215 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH----------GDTLDRPTPKSIAP 264
P ++ +G + LT+ G ++T G GQLG L+R
Sbjct: 177 NTPVIKIASGNDHLVLLTVDGDLYTSGCGEQGQLGRVPERFTNRGGRKGLERLLVPQCIH 236
Query: 265 LEEVGS----VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR 320
L+ GS + G + AV+ G VY FG + LG P+ + +F+
Sbjct: 237 LKAKGSGRVHFQDVFCGAYFTFAVSQEGHVYGFGLSNYHQLGTKNTQACYAPQNLTSFKN 296
Query: 321 KGIHVVRVSAGDEHVVALDSSG 342
+ S G H V +DS G
Sbjct: 297 STKSWIGFSGGQHHTVCVDSEG 318
>sp|Q9R0X5|RPGR_MOUSE X-linked retinitis pigmentosa GTPase regulator OS=Mus musculus
GN=Rpgr PE=1 SV=2
Length = 1001
Score = 58.9 bits (141), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 64/135 (47%), Gaps = 1/135 (0%)
Query: 168 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
+S + H A V + +++ G N+ G + I +P ++ALK K G N
Sbjct: 40 LSCGDEHTAIVTGNNKLYMFGSNNWGQLG-LGSKAAIIKPTCIKALKPEKVKLAACGRNH 98
Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
T T G V+ G N GQLG GDT DR T I ++ Q++AG + A+T +
Sbjct: 99 TLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSAALTED 158
Query: 288 GVVYSFGSGSNFCLG 302
G ++ +G S +G
Sbjct: 159 GKLFMWGDNSEGQIG 173
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 110/265 (41%), Gaps = 62/265 (23%)
Query: 119 GRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV-QVSASENHAA 176
GR HTL+ +++ V++ G + G LG G +T +F +I F + A + Q+SA N +A
Sbjct: 95 GRNHTLVSTDTGGVYAAGGNNEGQLGLG-DTDDRDTFHQIVFFTPADTIKQLSAGANTSA 153
Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
+ + G++F GDNS G D + + P E G P ++ G + F+T+ G
Sbjct: 154 ALTEDGKLFMWGDNSEGQIGLEDKSN-VCIPH--EVTVGKPISWISCGYYHSAFVTMDGE 210
Query: 237 VHTCGSNTHG-------------------------------------------------- 246
++T G +G
Sbjct: 211 LYTFGEPENGKLGLPNELLMNHRSPQRVLGIPERVIQVACGGGHTVVLTEKVVYAFGLGQ 270
Query: 247 --QLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 303
QLG G L + PK I +++ + I+ G ++ +T G++Y+FG G + LG
Sbjct: 271 FGQLGLGTFLFETSEPKIIERIKD-QKICHISCGENHTALMTELGLLYTFGDGRHGKLGL 329
Query: 304 GEQH--DELQPRAIQTFRRKGIHVV 326
G ++ ++ P F R + ++
Sbjct: 330 GMENFTNQFFPTLCSNFLRFAVQLI 354
>sp|Q8K1R7|NEK9_MOUSE Serine/threonine-protein kinase Nek9 OS=Mus musculus GN=Nek9 PE=1
SV=2
Length = 984
Score = 58.5 bits (140), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 107/239 (44%), Gaps = 23/239 (9%)
Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
R T+ + +V + +S V G G T Q + + S QV A H A V
Sbjct: 330 RSSTVTEAPIAVVTSRTSEVYVWGGGKSTPQKLDVIK----SGCSARQVCAGNTHFAVVT 385
Query: 180 QSGQVFTC-----GDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFLTI 233
+++T G GH D + +R P+ VE L+G QV+ G +FT +T
Sbjct: 386 VEKELYTWVNMQGGTKLHGQLGHGD--KASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTD 443
Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLE----EVGSVVQIAAGPSYMLAVTGNG 288
G ++ GS+ +G +G +D+ + P+ + P++ V Q++ G ++++ +T N
Sbjct: 444 EGQLYAFGSDYYGCMG----VDKVSGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNK 499
Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSLC 347
VYS+G G LG + D P+ + K + +V V G + L SG V C
Sbjct: 500 EVYSWGCGEYGRLGLDSEEDYYTPQRVDV--PKALIIVAVQCGCDGTFLLTQSGKVLAC 556
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 105/252 (41%), Gaps = 32/252 (12%)
Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLG----HGPETTQCVSFTRINFPSAAHVVQVS 169
Q++ G T+ +++ +++ GS G +G GPE + + ++NF + V QVS
Sbjct: 430 QVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGPEVLEPM---QLNFFLSNPVEQVS 486
Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVPCKQVTAG 224
+NH + ++ +V++ G CG D+ + P+ V+ K + V G
Sbjct: 487 CGDNHVVVLTRNKEVYSWG------CGEYGRLGLDSEEDYYTPQRVDVPKALIIVAVQCG 540
Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLG----------HGDTLDRPTPKSIAPLEEVG--SVV 272
+ T LT G V CG N +LG H + P S +++ +
Sbjct: 541 CDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIR 600
Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
IA G ++ A+ G + +FG LG G L + G V+RVS GD
Sbjct: 601 TIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGG-PLGGKQVIRVSCGD 659
Query: 333 EHVVALDSSGYV 344
E +A ++
Sbjct: 660 EFTIAATDDNHI 671
>sp|Q54Q89|RCCDC_DICDI RCC1 repeat-containing protein DDB_G0284033 OS=Dictyostelium
discoideum GN=DDB_G0284033 PE=4 SV=2
Length = 487
Score = 58.2 bits (139), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 112/252 (44%), Gaps = 37/252 (14%)
Query: 129 SSVFSCGSSLCGVLGHGPETTQCVSFTRINFP---------SAAHVVQVSASENHAAFV- 178
+ V+S GS L G LGHG + T+ V I + + ++++ ++ F
Sbjct: 67 NKVYSWGSGLNGKLGHGLDETKIVVPKEIEIKEDDDNNRVFNQGKINKITSGTTYSIFSG 126
Query: 179 ---LQSGQVFT-CGDN--SSFCCGHRDT----NRPIFRPRLVEA--LKGVPCKQVTAGLN 226
++ QVF CGDN + G+ N + ++++ +KG KQ+ +G
Sbjct: 127 YDQIKDRQVFYGCGDNRDAQLIVGNGKIQSLENIELLESPMLKSDQMKGKQLKQLISGTY 186
Query: 227 FTGFLTI-------------RGHVHTCGSNTHGQLGHGD-TLDRPTPKSIAPLEEVGSVV 272
+ R + G++ GQ+G + + P + L E+G +
Sbjct: 187 HNACILNDSNSNNNNNNNKDRSLILLWGASNSGQIGSPEYNRVQYDPYNNKVLSEIG-IK 245
Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
+I+ G ++ +A++ +G +YSFGS + LG+G+ +E +P+ I + ++ + G
Sbjct: 246 KISMGATFTIALSNDGKLYSFGSSTFNELGNGDMFNEREPKLIDNQLLQDNEIIDLECGF 305
Query: 333 EHVVALDSSGYV 344
H VAL S +
Sbjct: 306 FHTVALTSDNKI 317
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 57/112 (50%), Gaps = 1/112 (0%)
Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
+ G ++S G + NR + P + L + K+++ G FT L+ G +++ GS+
Sbjct: 210 ILLWGASNSGQIGSPEYNRVQYDPYNNKVLSEIGIKKISMGATFTIALSNDGKLYSFGSS 269
Query: 244 THGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
T +LG+GD + PK I L + ++ + G + +A+T + + ++G
Sbjct: 270 TFNELGNGDMFNEREPKLIDNQLLQDNEIIDLECGFFHTVALTSDNKILTWG 321
Score = 33.5 bits (75), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 31/147 (21%), Positives = 62/147 (42%), Gaps = 15/147 (10%)
Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA------HVV 166
+ + G +HT+ L S++ + + G + PE T SFT + + + ++
Sbjct: 299 IDLECGFFHTVALTSDNKILTWGRNQESQCFPVPEGTGKGSFTNVQYLDTSSLGDHDKII 358
Query: 167 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK-----GVPCKQV 221
Q+ AS ++ + ++G +++ G N CG +N F+ ++ +K + K+
Sbjct: 359 QIGASNLNSYILTENGNIYSIGSNDHGQCGIEKSN---FKKGILNKIKIGDDGNIKVKKF 415
Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQL 248
+ T G GSN QL
Sbjct: 416 YSRFKTVIVETTDGRFFGWGSNFDHQL 442
>sp|O75592|MYCB2_HUMAN Probable E3 ubiquitin-protein ligase MYCBP2 OS=Homo sapiens GN=MYCBP2
PE=1 SV=3
Length = 4640
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 60/117 (51%), Gaps = 8/117 (6%)
Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR--PRLVEALK 214
+ F VQVS +H+ ++++G V+T G GH D N R P LV+AL
Sbjct: 896 VRFDCELRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNS---RGCPTLVQALP 952
Query: 215 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGS 270
G P QVTAG N T L + G V T GS + GQLG LD P + AP+ +GS
Sbjct: 953 G-PSTQVTAGSNHTAVLLMDGQVFTFGSFSKGQLGR-PILDVPYWNAKPAPMPNIGS 1007
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
QV+ G + + L G V+T G HGQLGHGD R P + L G Q+ AG +
Sbjct: 906 QVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALP--GPSTQVTAGSN 963
Query: 280 YMLAVTGNGVVYSFGSGSNFCLG 302
+ + +G V++FGS S LG
Sbjct: 964 HTAVLLMDGQVFTFGSFSKGQLG 986
Score = 35.0 bits (79), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
VQ++ G + + + NG VY+FG G + LGHG+ + P +Q +V+A
Sbjct: 904 AVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPS---TQVTA 960
Query: 331 GDEHVVALDSSGYV 344
G H L G V
Sbjct: 961 GSNHTAVLLMDGQV 974
>sp|Q18211|RCC1_CAEEL Regulator of chromosome condensation OS=Caenorhabditis elegans
GN=ran-3 PE=4 SV=1
Length = 569
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 81/171 (47%), Gaps = 15/171 (8%)
Query: 183 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK--GVPCKQVTAGLNFTGFLTIRGHVHTC 240
+V +CG+ + R T + +PR V+ + G+ Q AG + LT G V+ C
Sbjct: 153 RVLSCGEGEALGHPGRTTTK---KPRKVDIFEEEGLKPLQAVAGGVHSAVLTSEGEVYMC 209
Query: 241 GSNTHGQL------GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
G N G + G T + K +E+ G +V +AAG S+ A+T G V ++G
Sbjct: 210 GINEKGTVPAEGVEKEGSTDEFAKVKFEEDIEKEGKIVMLAAGASFTAALTDQGSVIAWG 269
Query: 295 SGSNFCLGHGEQHD---ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
+ N G+ + H ++Q + + +V+++AG+ H+V LD G
Sbjct: 270 NLRN-SNGNVDVHPLLHKMQEAPVVIVHQAKRKIVKIAAGENHLVMLDEKG 319
Score = 37.0 bits (84), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 76/188 (40%), Gaps = 12/188 (6%)
Query: 126 ISNSSVFSCGSSLCGVLGH-GPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
I V SCG LGH G TT+ I +Q A H+A + G+V
Sbjct: 149 IIGDRVLSCGEGEA--LGHPGRTTTKKPRKVDIFEEEGLKPLQAVAGGVHSAVLTSEGEV 206
Query: 185 FTCGDNSSFCCGHRDTNRP-----IFRPRLVEAL-KGVPCKQVTAGLNFTGFLTIRGHVH 238
+ CG N + + + E + K + AG +FT LT +G V
Sbjct: 207 YMCGINEKGTVPAEGVEKEGSTDEFAKVKFEEDIEKEGKIVMLAAGASFTAALTDQGSVI 266
Query: 239 TCGS--NTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGS 295
G+ N++G + L + + + + +V+IAAG ++++ + G + +FG
Sbjct: 267 AWGNLRNSNGNVDVHPLLHKMQEAPVVIVHQAKRKIVKIAAGENHLVMLDEKGCLLTFGD 326
Query: 296 GSNFCLGH 303
G LG
Sbjct: 327 GEMGQLGR 334
Score = 32.3 bits (72), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 24/52 (46%)
Query: 296 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSLC 347
G LGH + +PR + F +G+ ++ AG H L S G V +C
Sbjct: 158 GEGEALGHPGRTTTKKPRKVDIFEEEGLKPLQAVAGGVHSAVLTSEGEVYMC 209
>sp|Q920R0|ALS2_MOUSE Alsin OS=Mus musculus GN=Als2 PE=1 SV=3
Length = 1651
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 65/137 (47%), Gaps = 9/137 (6%)
Query: 207 PRLVEALKGVPCKQVTAGLNFTG-----FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 261
PRL+ V + V ++G ++R V T G GQLGHGD L R P
Sbjct: 487 PRLLRKAARVKTRTVVLTPTYSGEADALLPSLRTEVWTWGKGKEGQLGHGDVLPRLQPLC 546
Query: 262 IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 321
+ L+ V+ + AG S+ LA+T VYS+GS + LGH E + PR +
Sbjct: 547 VKCLDG-KEVIHLEAGGSHSLALTAKSQVYSWGSNTFGQLGHSEFPTTV-PRLSKVSSEN 604
Query: 322 GIHVVRVSAGDEHVVAL 338
G V V+AG ++ + L
Sbjct: 605 G--VWSVAAGQDYSLFL 619
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 50/103 (48%), Gaps = 9/103 (8%)
Query: 183 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
+V+T G GH D P +P V+ L G + AG + + LT + V++ GS
Sbjct: 521 EVWTWGKGKEGQLGHGDV-LPRLQPLCVKCLDGKEVIHLEAGGSHSLALTAKSQVYSWGS 579
Query: 243 NTHGQLGHGDTLDRPTPKSIAPLEEVGS---VVQIAAGPSYML 282
NT GQLGH + P ++ L +V S V +AAG Y L
Sbjct: 580 NTFGQLGHSE-----FPTTVPRLSKVSSENGVWSVAAGQDYSL 617
Score = 38.1 bits (87), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 66/149 (44%), Gaps = 21/149 (14%)
Query: 165 VVQVSASENHAAFVLQSGQVFTCG------DNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
V+Q + H + + G+V++ G +++ C P L AL G
Sbjct: 43 VLQAALGVRHGVLLTEDGEVYSFGTLPWKSESAEICPSS---------PLLESALVGHHV 93
Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQ--LGHGDTLDRPTPKSIAPLEEVGS----VV 272
V G +G +T G V+ G N GQ + + + P+P SI+ E S ++
Sbjct: 94 ITVATGSFHSGAVTESGVVYMWGENAAGQCAVANQQYVPEPSPVSISDSETSPSLAVRIL 153
Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCL 301
Q+A G + LA++ + ++++G+G L
Sbjct: 154 QLACGEEHTLALSLSREIWAWGTGCQLGL 182
Score = 34.7 bits (78), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 75/189 (39%), Gaps = 29/189 (15%)
Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 169
+G LL S + V++ G G LGHG P +C+ V+ +
Sbjct: 508 SGEADALLPSLRTEVWTWGKGKEGQLGHGDVLPRLQPLCVKCLD--------GKEVIHLE 559
Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
A +H+ + QV++ G N+ GH + P PRL + V AG +++
Sbjct: 560 AGGSHSLALTAKSQVYSWGSNTFGQLGHSEF--PTTVPRLSKVSSENGVWSVAAGQDYSL 617
Query: 230 FLT----IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL----EEVGSVVQIAAGPSYM 281
FL + ++ G + GDTL + P+ ++G + ++ AG
Sbjct: 618 FLVDTEDFQPGLYYSGRQDRAE---GDTLPENPSGTKTPVLLSCSKLGYISRVTAGKDSY 674
Query: 282 LAVTGNGVV 290
LA+ ++
Sbjct: 675 LALVDKNIM 683
>sp|P0C5Y8|ALS2_RAT Alsin OS=Rattus norvegicus GN=Als2 PE=2 SV=1
Length = 1651
Score = 56.2 bits (134), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 51/104 (49%), Gaps = 6/104 (5%)
Query: 207 PRLVEALKGVPCKQVTAGLNFTG-----FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 261
PRL+ V + V ++G ++R V T G GQLGHGD L R P
Sbjct: 487 PRLLRKAARVKTRTVVLTPTYSGEADALLPSLRTEVWTWGKGKEGQLGHGDVLPRLQPLC 546
Query: 262 IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
+ L+ V+ + AG S+ LA+T VYS+GS + LGH E
Sbjct: 547 VKCLDG-KEVIHLEAGGSHSLALTAKSQVYSWGSNTFGQLGHSE 589
Score = 45.8 bits (107), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 50/103 (48%), Gaps = 9/103 (8%)
Query: 183 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
+V+T G GH D P +P V+ L G + AG + + LT + V++ GS
Sbjct: 521 EVWTWGKGKEGQLGHGDV-LPRLQPLCVKCLDGKEVIHLEAGGSHSLALTAKSQVYSWGS 579
Query: 243 NTHGQLGHGDTLDRPTPKSIAPLEEVGS---VVQIAAGPSYML 282
NT GQLGH + P ++ L +V S V +AAG Y L
Sbjct: 580 NTFGQLGHSE-----FPTTVPRLSKVSSESGVWSVAAGHGYSL 617
Score = 37.4 bits (85), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 66/150 (44%), Gaps = 23/150 (15%)
Query: 165 VVQVSASENHAAFVLQSGQVFTCG------DNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
V+Q + H + + G+V++ G + + C P L AL G
Sbjct: 43 VLQAALGVKHGVLLTEDGEVYSFGTLPWKSEAAEICPSS---------PLLESALVGHHV 93
Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQ--LGHGDTLDRPTPKSIA-----PLEEVGSV 271
V G +G +T G V+ G N GQ + + + P+P SI+ PL V +
Sbjct: 94 VTVATGSFHSGAVTESGVVYMWGENAAGQCAVANQQYVSEPSPVSISDSETSPLLAV-RI 152
Query: 272 VQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 301
+Q+A G + LA++ + ++++G+G L
Sbjct: 153 LQLACGEEHTLALSISREIWAWGTGCQLGL 182
Score = 33.5 bits (75), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 74/189 (39%), Gaps = 29/189 (15%)
Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 169
+G LL S + V++ G G LGHG P +C+ V+ +
Sbjct: 508 SGEADALLPSLRTEVWTWGKGKEGQLGHGDVLPRLQPLCVKCLD--------GKEVIHLE 559
Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
A +H+ + QV++ G N+ GH + P PRL + V AG ++
Sbjct: 560 AGGSHSLALTAKSQVYSWGSNTFGQLGH--SEFPTTVPRLSKVSSESGVWSVAAGHGYSL 617
Query: 230 FLT----IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL----EEVGSVVQIAAGPSYM 281
FL + ++ G + GDTL + P+ ++G + ++ AG
Sbjct: 618 FLVDTEDFQPGLYYSGRQDRAE---GDTLPENPSGTTTPVLLSCSKLGYISRVTAGKDSY 674
Query: 282 LAVTGNGVV 290
LA+ ++
Sbjct: 675 LALVDKNIM 683
>sp|Q92834|RPGR_HUMAN X-linked retinitis pigmentosa GTPase regulator OS=Homo sapiens
GN=RPGR PE=1 SV=2
Length = 1020
Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 67/137 (48%), Gaps = 1/137 (0%)
Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
V +S + H+A V + +++ G N+ G + I +P V+ALK K G
Sbjct: 38 VHLSCGDEHSAVVTGNNKLYMFGSNNWGQLG-LGSKSAISKPTCVKALKPEKVKLAACGR 96
Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
N T T G+V+ G N GQLG GDT +R T I+ + Q++AG + A+T
Sbjct: 97 NHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALT 156
Query: 286 GNGVVYSFGSGSNFCLG 302
+G ++ +G S +G
Sbjct: 157 EDGRLFMWGDNSEGQIG 173
Score = 52.0 bits (123), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 105/242 (43%), Gaps = 62/242 (25%)
Query: 119 GRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV-QVSASENHAA 176
GR HTL+ + +V++ G + G LG G +T + +F I+F ++ H + Q+SA N +A
Sbjct: 95 GRNHTLVSTEGGNVYATGGNNEGQLGLG-DTEERNTFHVISFFTSEHKIKQLSAGSNTSA 153
Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
+ + G++F GDNS G ++ + + P+ V G P ++ G + F+T G
Sbjct: 154 ALTEDGRLFMWGDNSEGQIGLKNVSN-VCVPQQVTI--GKPVSWISCGYYHSAFVTTDGE 210
Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN------- 287
++ G +G+LG + L + TP+ ++ + E V+Q+A G + + +T N
Sbjct: 211 LYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPE--KVIQVACGGEHTVVLTENAVYTFGL 268
Query: 288 ---------------------------------------------GVVYSFGSGSNFCLG 302
G++Y+FG G + LG
Sbjct: 269 GQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALITDIGLMYTFGDGRHGKLG 328
Query: 303 HG 304
G
Sbjct: 329 LG 330
>sp|P25171|RCC1_DROME Regulator of chromosome condensation OS=Drosophila melanogaster
GN=Bj1 PE=1 SV=2
Length = 547
Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 103/237 (43%), Gaps = 19/237 (8%)
Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETT----------QCVSFTRINFPSAAH 164
I +G H ++++ + VF+ G + G LG E + + T++ A
Sbjct: 183 IASGADHLVILTTAGKVFTVGCAEQGQLGRLSERSISGEGRRGKRDLLRPTQLIITRAKP 242
Query: 165 VVQVSASENHAAFVLQSGQ--VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
+ A+ N+ F+ +S ++ G N+ H + + LK + + +
Sbjct: 243 FEAIWAT-NYCTFMRESQTQVIWATGLNNFKQLAHETKGKEFALTPIKTELKDI--RHIA 299
Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAGPSYM 281
G + T LT G +G+LG GD D P + L E +V + G
Sbjct: 300 GGQHHTVILTTDLKCSVVGRPEYGRLGLGDVKDVVEKPTIVKKLTE--KIVSVGCGEVCS 357
Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
AVT +G +YS+GSG N LG G+ DEL+P + + +G H++ S G +H + L
Sbjct: 358 YAVTIDGKLYSWGSGVNNQLGVGDGDDELEPIVVVSKNTQGKHMLLASGGGQHAIFL 414
Score = 51.6 bits (122), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 57/116 (49%), Gaps = 10/116 (8%)
Query: 232 TIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
T+ G+V CG+ GQLG G D L+R K ++P+ + V I+AG + L +T +G +
Sbjct: 39 TVLGNVLVCGNGDVGQLGLGEDILER---KRLSPVAGIPDAVDISAGGMHNLVLTKSGDI 95
Query: 291 YSFGSGSNFCLGHGEQHD--ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
YSFG LG D E +P I + + +SAGD H L G V
Sbjct: 96 YSFGCNDEGALGRDTSEDGSESKPDLIDLPGK----ALCISAGDSHSACLLEDGRV 147
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 78/162 (48%), Gaps = 20/162 (12%)
Query: 95 RFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVS 153
+ L V D V+ SAG M H L+++ S ++S G + G LG +T++ S
Sbjct: 65 KRLSPVAGIPDAVDISAGGM-------HNLVLTKSGDIYSFGCNDEGALGR--DTSEDGS 115
Query: 154 FTR---INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF--RPR 208
++ I+ P A + +SA ++H+A +L+ G+VF G SF H + I +
Sbjct: 116 ESKPDLIDLPGKA--LCISAGDSHSACLLEDGRVFAWG---SFRDSHGNMGLTIDGNKRT 170
Query: 209 LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH 250
++ ++G C + +G + LT G V T G GQLG
Sbjct: 171 PIDLMEGTVCCSIASGADHLVILTTAGKVFTVGCAEQGQLGR 212
Score = 35.4 bits (80), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 73/170 (42%), Gaps = 19/170 (11%)
Query: 182 GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVP-CKQVTAGLNFTGFLTIRGHVHTC 240
G V CG+ G I + + + G+P ++AG LT G +++
Sbjct: 42 GNVLVCGNGD---VGQLGLGEDILERKRLSPVAGIPDAVDISAGGMHNLVLTKSGDIYSF 98
Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
G N G LG DT + + ++ G + I+AG S+ + +G V+++GS F
Sbjct: 99 GCNDEGALGR-DTSEDGSESKPDLIDLPGKALCISAGDSHSACLLEDGRVFAWGS---FR 154
Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVR------VSAGDEHVVALDSSGYV 344
HG I +R I ++ +++G +H+V L ++G V
Sbjct: 155 DSHGNMG-----LTIDGNKRTPIDLMEGTVCCSIASGADHLVILTTAGKV 199
>sp|P18754|RCC1_HUMAN Regulator of chromosome condensation OS=Homo sapiens GN=RCC1 PE=1
SV=1
Length = 421
Score = 55.1 bits (131), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 104/261 (39%), Gaps = 38/261 (14%)
Query: 105 DIVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA 163
D+V+ AG M HT+ +S S V+S G + G LG + +
Sbjct: 68 DVVQAEAGGM-------HTVCLSKSGQVYSFGCNDEGALGR-DTSVEGSEMVPGKVELQE 119
Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRL-VEALKGV 216
VVQVSA ++H A + G+VF G SF RD N P+ + + V+ V
Sbjct: 120 KVVQVSAGDSHTAALTDDGRVFLWG---SF----RDNNGVIGLLEPMKKSMVPVQVQLDV 172
Query: 217 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH----------GDTLDRPTPKSIAPLE 266
P +V +G + LT G ++T G GQLG L+R L+
Sbjct: 173 PVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLK 232
Query: 267 EVGSVVQIA-----AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 321
GS + G + A++ G VY FG + LG P+ + +F+
Sbjct: 233 SRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFKNS 292
Query: 322 GIHVVRVSAGDEHVVALDSSG 342
V S G H V +DS G
Sbjct: 293 TKSWVGFSGGQHHTVCMDSEG 313
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 61/118 (51%), Gaps = 4/118 (3%)
Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD-TLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
+ G + T + G ++ G +G+LG G+ ++ P I+ L V SV A G S
Sbjct: 300 SGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPAVSSV---ACGASV 356
Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
AVT +G V+++G G+N+ LG G+ D P + + + V+ VS+G +H V L
Sbjct: 357 GYAVTKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMMGKQLENRVVLSVSSGGQHTVLL 414
Score = 49.3 bits (116), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 58/118 (49%), Gaps = 10/118 (8%)
Query: 232 TIRGHVHTCGSNTHGQLGHGDT-LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
T G V T G GQLG G+ ++R P ++ E+V VQ AG + + ++ +G V
Sbjct: 32 TEPGLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDV---VQAEAGGMHTVCLSKSGQV 88
Query: 291 YSFGSGSNFCLGHGE--QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVSL 346
YSFG LG + E+ P ++ + VV+VSAGD H AL G V L
Sbjct: 89 YSFGCNDEGALGRDTSVEGSEMVPGKVELQEK----VVQVSAGDSHTAALTDDGRVFL 142
>sp|Q7TPH6|MYCB2_MOUSE Probable E3 ubiquitin-protein ligase MYCBP2 OS=Mus musculus GN=Mycbp2
PE=1 SV=2
Length = 4711
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 59/117 (50%), Gaps = 8/117 (6%)
Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR--PRLVEALK 214
+ F VQVS +H+ ++++G V+T G GH D N R P LV+AL
Sbjct: 896 VRFDCELRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNS---RGCPTLVQALP 952
Query: 215 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGS 270
G P QVTA N T L + G V T GS + GQLG LD P + AP+ +GS
Sbjct: 953 G-PSTQVTACSNHTAVLLMDGQVFTFGSFSKGQLGR-PILDIPYWNAKPAPMPNIGS 1007
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
QV+ G + + L G V+T G HGQLGHGD R P + L G Q+ A +
Sbjct: 906 QVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALP--GPSTQVTACSN 963
Query: 280 YMLAVTGNGVVYSFGSGSNFCLG 302
+ + +G V++FGS S LG
Sbjct: 964 HTAVLLMDGQVFTFGSFSKGQLG 986
Score = 31.6 bits (70), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Query: 272 VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
VQ++ G + + + NG VY+FG G + LGHG+ + P +Q +V+A
Sbjct: 905 VQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPS---TQVTAC 961
Query: 332 DEHVVALDSSGYV 344
H L G V
Sbjct: 962 SNHTAVLLMDGQV 974
>sp|Q9N1T2|RPGR_CANFA X-linked retinitis pigmentosa GTPase regulator OS=Canis familiaris
GN=RPGR PE=2 SV=1
Length = 1003
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 65/137 (47%), Gaps = 5/137 (3%)
Query: 168 VSASENHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
+S + H A V + +++ G N+ G + T + +P V+ALK K G
Sbjct: 40 LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKST---VSKPTCVKALKPEKVKFAACGR 96
Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
N T T G V+ G N GQLG GDT +R T I+ + Q++AG + A+T
Sbjct: 97 NHTLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAALT 156
Query: 286 GNGVVYSFGSGSNFCLG 302
+G ++ +G S +G
Sbjct: 157 EDGELFMWGDNSEGQIG 173
Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 103/239 (43%), Gaps = 56/239 (23%)
Query: 119 GRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINF-PSAAHVVQVSASENHAA 176
GR HTL+ + V++ G + G LG G +T + +F I+F S + Q+SA N +A
Sbjct: 95 GRNHTLVSTEGGKVYAAGGNNEGQLGLG-DTEERSTFHLISFFTSQRKIKQLSAGSNTSA 153
Query: 177 FVLQSGQVFTCGDNSS-------------------------FCCGHRDT----------- 200
+ + G++F GDNS CG+ +
Sbjct: 154 ALTEDGELFMWGDNSEGQIGLENVTNVCVPQQVTVGKPISWISCGYYHSAFVTTEGQLYT 213
Query: 201 ------------NRPIFRPRLVEALKGVPCK--QVTAGLNFTGFLTIRGHVHTCGSNTHG 246
N+ + R+ + + G+P K QV G T LT + V+T G G
Sbjct: 214 FGEPECGKLGLPNQLLVNHRMPQPVPGIPGKVVQVACGGGHTVVLTEKA-VYTFGLGQFG 272
Query: 247 QLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG 304
QLG G L + PK+I +++ + IA G ++ +T G++Y+FG G + LG G
Sbjct: 273 QLGLGTFLFETSVPKAIEHIKDQ-KISFIACGENHTALITDMGLMYTFGDGRHGKLGLG 330
Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 100/237 (42%), Gaps = 32/237 (13%)
Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETT----QCVSFTRINFPSAAHVVQVSA 170
++ G HT +++ N+ ++ GS+ G LG G ++T CV + V +
Sbjct: 40 LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALK-----PEKVKFAAC 94
Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGV-PCKQVTAGLNFT 228
NH + G+V+ G N+ G DT R F L+ KQ++AG N +
Sbjct: 95 GRNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFH--LISFFTSQRKIKQLSAGSNTS 152
Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGN 287
LT G + G N+ GQ+G + + P+ + VG + I+ G + VT
Sbjct: 153 AALTEDGELFMWGDNSEGQIGLENVTNVCVPQQVT----VGKPISWISCGYYHSAFVTTE 208
Query: 288 GVVYSFGSGSNFCLGHGEQ----HDELQPRAIQTFRRKGI--HVVRVSAGDEHVVAL 338
G +Y+FG LG Q H QP GI VV+V+ G H V L
Sbjct: 209 GQLYTFGEPECGKLGLPNQLLVNHRMPQPVP-------GIPGKVVQVACGGGHTVVL 258
Score = 35.0 bits (79), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 59/143 (41%), Gaps = 14/143 (9%)
Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA---HVVQVSAS 171
I+ G YH+ ++ +++ G CG LG Q + R+ P VVQV+
Sbjct: 195 ISCGYYHSAFVTTEGQLYTFGEPECGKLGL---PNQLLVNHRMPQPVPGIPGKVVQVACG 251
Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR---PRLVEALKGVPCKQVTAGLNFT 228
H VL V+T G G +F P+ +E +K + G N T
Sbjct: 252 GGHTV-VLTEKAVYTFGLGQ---FGQLGLGTFLFETSVPKAIEHIKDQKISFIACGENHT 307
Query: 229 GFLTIRGHVHTCGSNTHGQLGHG 251
+T G ++T G HG+LG G
Sbjct: 308 ALITDMGLMYTFGDGRHGKLGLG 330
>sp|Q5BIW4|ALS2_PANTR Alsin OS=Pan troglodytes GN=ALS2 PE=2 SV=1
Length = 1657
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 64/137 (46%), Gaps = 9/137 (6%)
Query: 207 PRLVEALKGVPCKQVTAGLNFTG-----FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 261
PRL+ V + V ++G ++R V T G GQLGHGD L R P
Sbjct: 493 PRLLRKAARVKTRTVVLTPTYSGEADALLPSLRTEVWTWGKGKEGQLGHGDVLPRLQPLC 552
Query: 262 IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 321
+ L+ V+ + AG + LA+T VYS+GS + LGH + + PR +
Sbjct: 553 VKCLDG-KEVIHLEAGGYHSLALTAKSQVYSWGSNTFGQLGHSDFPTTV-PRLAKISSEN 610
Query: 322 GIHVVRVSAGDEHVVAL 338
G V V+AG ++ + L
Sbjct: 611 G--VWSVAAGRDYSLFL 625
Score = 48.5 bits (114), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 72/164 (43%), Gaps = 15/164 (9%)
Query: 183 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
+V+T G GH D P +P V+ L G + AG + LT + V++ GS
Sbjct: 527 EVWTWGKGKEGQLGHGDV-LPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGS 585
Query: 243 NTHGQLGHGDTLDRPTPKSIAPLEEVGS---VVQIAAGPSYMLAVTGN-----GVVYSFG 294
NT GQLGH D P ++ L ++ S V +AAG Y L + G+ YS
Sbjct: 586 NTFGQLGHSD-----FPTTVPRLAKISSENGVWSVAAGRDYSLFLVDTEDFQPGLYYSGR 640
Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
E H + + + + G ++ RV+AG + +AL
Sbjct: 641 QDPTEGDNLPENHSGSKTPVLLSCSKLG-YISRVTAGKDSYLAL 683
Score = 36.2 bits (82), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 64/146 (43%), Gaps = 15/146 (10%)
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPI--FRPRLVEALKGVPCKQVT 222
V+Q + H + + G+V++ G R I P L AL G V
Sbjct: 43 VLQAALGVKHGVLLTEDGEVYSFG-----TLPWRSGPVEICPSSPILENALVGQYVVTVA 97
Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQ--LGHGDTLDRPTPKSIA-----PLEEVGSVVQIA 275
G +G +T G + G N+ GQ + + + P P SIA PL V ++Q+A
Sbjct: 98 TGSFHSGAVTDNGVAYMWGENSAGQCAVANQQYVPEPNPVSIADSEASPLLAV-RILQLA 156
Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCL 301
G + LA++ + ++++G+G L
Sbjct: 157 CGEEHTLALSISREIWAWGTGCQLGL 182
Score = 33.1 bits (74), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 73/189 (38%), Gaps = 29/189 (15%)
Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 169
+G LL S + V++ G G LGHG P +C+ V+ +
Sbjct: 514 SGEADALLPSLRTEVWTWGKGKEGQLGHGDVLPRLQPLCVKCLD--------GKEVIHLE 565
Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
A H+ + QV++ G N+ GH D P PRL + V AG +++
Sbjct: 566 AGGYHSLALTAKSQVYSWGSNTFGQLGHSDF--PTTVPRLAKISSENGVWSVAAGRDYSL 623
Query: 230 FLT----IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL----EEVGSVVQIAAGPSYM 281
FL + ++ G + GD L S P+ ++G + ++ AG
Sbjct: 624 FLVDTEDFQPGLYYSGRQDPTE---GDNLPENHSGSKTPVLLSCSKLGYISRVTAGKDSY 680
Query: 282 LAVTGNGVV 290
LA+ ++
Sbjct: 681 LALVDKNIM 689
Score = 31.6 bits (70), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
+ + G YH+L L + S V+S GS+ G LGH T +I+ S V V+A
Sbjct: 562 IHLEAGGYHSLALTAKSQVYSWGSNTFGQLGHSDFPTTVPRLAKIS--SENGVWSVAAGR 619
Query: 173 NHAAFVLQS 181
+++ F++ +
Sbjct: 620 DYSLFLVDT 628
Score = 31.6 bits (70), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 5/76 (6%)
Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGS-NFCLGHGEQH-DELQPRAIQTFRRKGIHVVRV 328
VV +A G + AVT NGV Y +G S C +Q+ E P +I + VR+
Sbjct: 93 VVTVATGSFHSGAVTDNGVAYMWGENSAGQCAVANQQYVPEPNPVSIADSEASPLLAVRI 152
Query: 329 ---SAGDEHVVALDSS 341
+ G+EH +AL S
Sbjct: 153 LQLACGEEHTLALSIS 168
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.135 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 128,684,047
Number of Sequences: 539616
Number of extensions: 5254892
Number of successful extensions: 12629
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 11846
Number of HSP's gapped (non-prelim): 350
length of query: 348
length of database: 191,569,459
effective HSP length: 118
effective length of query: 230
effective length of database: 127,894,771
effective search space: 29415797330
effective search space used: 29415797330
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)