Query 018994
Match_columns 348
No_of_seqs 240 out of 1702
Neff 7.2
Searched_HMMs 46136
Date Fri Mar 29 05:48:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018994.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018994hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1282 Serine carboxypeptidas 100.0 2E-89 4.2E-94 678.7 28.0 302 19-347 22-327 (454)
2 PLN02209 serine carboxypeptida 100.0 4.2E-78 9.1E-83 601.6 29.1 310 11-347 9-318 (437)
3 PLN03016 sinapoylglucose-malat 100.0 2E-77 4.3E-82 596.5 27.5 296 22-346 18-313 (433)
4 PF00450 Peptidase_S10: Serine 100.0 8.9E-74 1.9E-78 566.2 20.0 286 31-346 1-292 (415)
5 PTZ00472 serine carboxypeptida 100.0 1.6E-66 3.4E-71 523.2 25.8 274 29-347 35-331 (462)
6 COG2939 Carboxypeptidase C (ca 100.0 5.4E-50 1.2E-54 394.4 16.2 225 55-286 86-333 (498)
7 PLN02213 sinapoylglucose-malat 100.0 5.9E-47 1.3E-51 365.2 17.6 199 119-346 1-199 (319)
8 KOG1283 Serine carboxypeptidas 100.0 1E-43 2.2E-48 330.4 10.6 227 41-283 3-239 (414)
9 PRK00870 haloalkane dehalogena 98.3 4.5E-06 9.8E-11 79.2 11.3 140 24-214 8-149 (302)
10 TIGR01250 pro_imino_pep_2 prol 98.3 1.9E-06 4.1E-11 78.9 8.0 129 42-216 3-132 (288)
11 TIGR03611 RutD pyrimidine util 98.3 1.7E-06 3.7E-11 78.1 7.6 107 68-217 11-117 (257)
12 PLN02824 hydrolase, alpha/beta 98.3 3.6E-06 7.9E-11 79.4 9.1 123 44-215 11-137 (294)
13 TIGR03056 bchO_mg_che_rel puta 98.3 5.1E-06 1.1E-10 76.6 9.8 123 45-217 10-132 (278)
14 TIGR01249 pro_imino_pep_1 prol 98.3 6.4E-06 1.4E-10 78.6 10.7 125 43-216 6-131 (306)
15 PHA02857 monoglyceride lipase; 98.2 8.7E-06 1.9E-10 75.9 9.4 124 53-217 10-134 (276)
16 PLN02298 hydrolase, alpha/beta 98.1 2E-05 4.3E-10 75.9 10.5 139 40-216 31-170 (330)
17 PRK10673 acyl-CoA esterase; Pr 98.1 1E-05 2.2E-10 74.1 7.5 104 65-213 11-114 (255)
18 PLN02385 hydrolase; alpha/beta 98.0 4.6E-05 9.9E-10 74.2 11.0 127 52-216 70-198 (349)
19 PRK06489 hypothetical protein; 98.0 5.6E-05 1.2E-09 74.0 11.5 142 38-214 38-188 (360)
20 PLN02578 hydrolase 98.0 4.1E-05 8.9E-10 74.8 10.5 112 53-214 75-186 (354)
21 PF12697 Abhydrolase_6: Alpha/ 98.0 1.3E-05 2.9E-10 70.0 6.2 104 73-218 1-104 (228)
22 TIGR02240 PHA_depoly_arom poly 98.0 3.6E-05 7.9E-10 72.0 9.1 117 53-216 11-127 (276)
23 PF10340 DUF2424: Protein of u 98.0 3.3E-05 7.2E-10 75.9 9.0 133 55-219 105-239 (374)
24 PRK03592 haloalkane dehalogena 97.9 4.8E-05 1E-09 71.7 9.4 120 45-217 11-130 (295)
25 PRK03204 haloalkane dehalogena 97.9 7.5E-05 1.6E-09 70.7 10.1 123 41-215 14-136 (286)
26 PLN03084 alpha/beta hydrolase 97.9 8.1E-05 1.7E-09 74.0 10.0 132 38-216 101-233 (383)
27 TIGR02427 protocat_pcaD 3-oxoa 97.8 6.5E-05 1.4E-09 66.9 7.1 104 67-214 10-113 (251)
28 PRK11126 2-succinyl-6-hydroxy- 97.8 6.8E-05 1.5E-09 68.1 7.1 101 70-215 2-102 (242)
29 PLN02894 hydrolase, alpha/beta 97.7 0.00022 4.8E-09 71.2 10.1 108 68-215 103-211 (402)
30 TIGR03695 menH_SHCHC 2-succiny 97.6 0.00015 3.2E-09 64.3 7.1 105 70-215 1-105 (251)
31 PLN02652 hydrolase; alpha/beta 97.6 0.00026 5.6E-09 70.6 9.4 128 53-217 120-247 (395)
32 PRK10749 lysophospholipase L2; 97.6 0.00034 7.4E-09 67.7 9.5 125 53-216 40-167 (330)
33 TIGR03343 biphenyl_bphD 2-hydr 97.6 0.00028 6.1E-09 65.5 8.5 76 119-214 60-135 (282)
34 PRK14875 acetoin dehydrogenase 97.6 0.00032 6.9E-09 68.1 9.1 113 54-214 119-231 (371)
35 PLN02679 hydrolase, alpha/beta 97.5 0.00044 9.6E-09 67.8 9.8 105 69-215 87-191 (360)
36 PRK05077 frsA fermentation/res 97.5 0.00053 1.1E-08 68.8 9.4 80 120-217 223-302 (414)
37 PRK10349 carboxylesterase BioH 97.4 0.00025 5.4E-09 65.3 6.0 95 71-214 14-108 (256)
38 COG1506 DAP2 Dipeptidyl aminop 97.4 0.00041 8.8E-09 73.2 8.0 132 53-219 375-511 (620)
39 PLN03087 BODYGUARD 1 domain co 97.4 0.001 2.2E-08 68.0 10.4 133 40-214 175-308 (481)
40 TIGR01738 bioH putative pimelo 97.3 0.00041 8.9E-09 61.6 5.9 97 70-215 4-100 (245)
41 PLN02965 Probable pheophorbida 97.3 0.00056 1.2E-08 63.2 7.0 76 119-214 30-106 (255)
42 PRK08775 homoserine O-acetyltr 97.3 0.0014 3.1E-08 63.6 9.7 75 118-215 98-173 (343)
43 TIGR02821 fghA_ester_D S-formy 97.3 0.0047 1E-07 58.2 12.6 42 167-218 135-176 (275)
44 PLN02211 methyl indole-3-aceta 97.3 0.0011 2.3E-08 62.6 8.2 106 68-214 16-121 (273)
45 KOG4409 Predicted hydrolase/ac 97.2 0.0014 3.1E-08 63.4 8.0 87 115-218 112-198 (365)
46 TIGR03101 hydr2_PEP hydrolase, 97.1 0.0015 3.2E-08 61.8 7.4 126 54-218 10-137 (266)
47 PLN02980 2-oxoglutarate decarb 97.1 0.0026 5.7E-08 74.0 10.6 108 66-214 1367-1479(1655)
48 PRK05855 short chain dehydroge 96.9 0.0026 5.5E-08 65.4 8.1 100 53-187 12-111 (582)
49 COG0596 MhpC Predicted hydrola 96.9 0.0053 1.2E-07 53.6 8.9 104 70-216 21-124 (282)
50 PRK10566 esterase; Provisional 96.9 0.0036 7.9E-08 57.3 8.0 97 68-190 25-127 (249)
51 PLN02442 S-formylglutathione h 96.9 0.0071 1.5E-07 57.4 10.1 56 150-218 126-181 (283)
52 COG2267 PldB Lysophospholipase 96.8 0.0064 1.4E-07 58.4 9.4 139 39-218 7-145 (298)
53 PRK07581 hypothetical protein; 96.8 0.0078 1.7E-07 58.1 10.0 129 53-215 25-159 (339)
54 PLN02511 hydrolase 96.8 0.014 3E-07 58.1 11.4 118 42-190 72-193 (388)
55 PRK10985 putative hydrolase; P 96.7 0.017 3.6E-07 55.8 11.3 134 44-216 34-169 (324)
56 COG3509 LpqC Poly(3-hydroxybut 96.7 0.035 7.5E-07 52.9 12.8 114 53-190 44-164 (312)
57 KOG1455 Lysophospholipase [Lip 96.7 0.023 5.1E-07 54.2 11.5 130 52-216 36-165 (313)
58 cd00707 Pancreat_lipase_like P 96.6 0.0025 5.5E-08 60.4 4.8 82 119-215 66-147 (275)
59 KOG4178 Soluble epoxide hydrol 96.6 0.016 3.6E-07 55.8 9.9 139 39-220 20-158 (322)
60 TIGR01840 esterase_phb esteras 96.5 0.015 3.2E-07 52.5 8.7 54 151-215 77-130 (212)
61 PF00561 Abhydrolase_1: alpha/ 96.4 0.0062 1.3E-07 53.9 6.0 77 121-214 2-78 (230)
62 KOG1515 Arylacetamide deacetyl 96.4 0.023 5E-07 55.5 10.2 145 42-218 62-210 (336)
63 KOG2564 Predicted acetyltransf 96.3 0.0077 1.7E-07 56.9 5.9 109 68-214 72-181 (343)
64 PRK10115 protease 2; Provision 96.3 0.017 3.8E-07 61.7 9.4 136 53-220 426-564 (686)
65 PRK00175 metX homoserine O-ace 96.2 0.037 8E-07 54.7 10.7 136 53-215 32-182 (379)
66 TIGR00976 /NonD putative hydro 96.1 0.02 4.4E-07 59.4 8.3 129 53-218 6-135 (550)
67 TIGR03100 hydr1_PEP hydrolase, 96.0 0.036 7.9E-07 52.1 9.1 79 120-217 58-136 (274)
68 TIGR01607 PST-A Plasmodium sub 96.0 0.021 4.5E-07 55.5 7.4 95 119-216 74-186 (332)
69 TIGR03230 lipo_lipase lipoprot 95.8 0.025 5.3E-07 57.3 7.4 80 119-214 73-153 (442)
70 PF00326 Peptidase_S9: Prolyl 95.7 0.0098 2.1E-07 53.4 3.5 93 118-221 13-105 (213)
71 PF06500 DUF1100: Alpha/beta h 95.5 0.0091 2E-07 59.6 2.9 81 120-218 219-299 (411)
72 PF00975 Thioesterase: Thioest 95.1 0.055 1.2E-06 48.7 6.6 78 119-215 27-104 (229)
73 KOG2100 Dipeptidyl aminopeptid 95.1 0.074 1.6E-06 57.5 8.5 166 42-242 499-671 (755)
74 PLN00021 chlorophyllase 95.0 0.17 3.8E-06 48.9 9.9 116 67-217 49-168 (313)
75 PRK10162 acetyl esterase; Prov 94.9 0.09 2E-06 50.7 7.6 45 169-217 153-197 (318)
76 KOG1838 Alpha/beta hydrolase [ 94.7 0.15 3.3E-06 50.8 8.6 109 67-215 122-236 (409)
77 PF12695 Abhydrolase_5: Alpha/ 94.4 0.054 1.2E-06 44.7 4.3 96 72-216 1-96 (145)
78 KOG4391 Predicted alpha/beta h 94.2 0.37 8.1E-06 44.3 9.3 123 53-217 64-186 (300)
79 TIGR01392 homoserO_Ac_trn homo 94.0 0.51 1.1E-05 45.9 10.7 134 53-215 15-162 (351)
80 KOG1454 Predicted hydrolase/ac 93.8 0.23 4.9E-06 48.4 7.8 66 120-194 87-152 (326)
81 PRK11460 putative hydrolase; P 93.5 0.26 5.7E-06 45.3 7.4 36 153-189 87-122 (232)
82 PLN02872 triacylglycerol lipas 93.4 0.42 9.1E-06 47.8 9.0 125 38-185 41-175 (395)
83 PF10503 Esterase_phd: Esteras 93.3 0.28 6E-06 45.1 7.1 50 156-215 83-132 (220)
84 PF10230 DUF2305: Uncharacteri 92.5 0.44 9.5E-06 44.9 7.4 118 70-217 2-124 (266)
85 PF02129 Peptidase_S15: X-Pro 91.3 0.25 5.4E-06 46.3 4.3 83 120-219 58-140 (272)
86 PF07859 Abhydrolase_3: alpha/ 91.3 0.27 5.9E-06 43.6 4.3 63 148-217 47-112 (211)
87 PRK11071 esterase YqiA; Provis 91.2 0.53 1.2E-05 41.9 6.1 47 155-217 49-95 (190)
88 PLN02454 triacylglycerol lipas 91.2 0.53 1.1E-05 47.2 6.5 68 147-217 206-273 (414)
89 PF01764 Lipase_3: Lipase (cla 90.9 0.44 9.5E-06 39.5 5.0 62 148-215 45-106 (140)
90 PF02230 Abhydrolase_2: Phosph 90.2 0.39 8.5E-06 43.3 4.3 76 148-235 85-166 (216)
91 COG0657 Aes Esterase/lipase [L 90.2 1.9 4.2E-05 41.0 9.4 46 168-219 150-195 (312)
92 cd00741 Lipase Lipase. Lipase 89.9 0.64 1.4E-05 39.5 5.2 59 149-215 10-68 (153)
93 cd00519 Lipase_3 Lipase (class 89.8 0.69 1.5E-05 42.1 5.6 60 149-216 110-169 (229)
94 cd00312 Esterase_lipase Estera 89.4 1.6 3.4E-05 44.5 8.5 36 153-189 160-195 (493)
95 COG4099 Predicted peptidase [G 89.2 6.2 0.00013 38.1 11.5 53 154-216 253-305 (387)
96 PRK05371 x-prolyl-dipeptidyl a 87.1 1.2 2.6E-05 48.3 6.2 85 118-218 278-376 (767)
97 PF05990 DUF900: Alpha/beta hy 86.5 1.1 2.4E-05 41.4 4.9 66 149-218 75-140 (233)
98 PF06057 VirJ: Bacterial virul 85.9 1.3 2.8E-05 39.9 4.7 65 144-217 45-109 (192)
99 PLN02571 triacylglycerol lipas 85.4 2.3 5E-05 42.7 6.7 69 148-217 205-277 (413)
100 PRK10252 entF enterobactin syn 85.0 4.4 9.5E-05 46.2 9.6 103 70-214 1068-1170(1296)
101 PF11144 DUF2920: Protein of u 84.7 1.7 3.7E-05 43.4 5.4 62 147-218 160-222 (403)
102 PF11288 DUF3089: Protein of u 84.3 1.7 3.7E-05 39.6 4.8 62 150-216 77-138 (207)
103 PF05728 UPF0227: Uncharacteri 83.3 1.5 3.2E-05 39.3 4.0 41 168-221 57-97 (187)
104 COG0400 Predicted esterase [Ge 82.6 5.4 0.00012 36.3 7.4 79 146-235 76-157 (207)
105 PF08237 PE-PPE: PE-PPE domain 82.4 4.5 9.8E-05 37.3 6.9 87 121-215 4-90 (225)
106 PF05577 Peptidase_S28: Serine 81.5 2.6 5.5E-05 42.4 5.4 90 119-220 59-153 (434)
107 TIGR03502 lipase_Pla1_cef extr 80.6 3.9 8.4E-05 44.5 6.5 46 145-190 521-575 (792)
108 PLN02753 triacylglycerol lipas 80.5 4.2 9.2E-05 42.0 6.5 72 146-217 286-361 (531)
109 COG3319 Thioesterase domains o 79.9 12 0.00025 35.4 8.8 60 144-216 45-104 (257)
110 PRK13604 luxD acyl transferase 78.7 16 0.00035 35.3 9.6 124 53-217 19-143 (307)
111 PRK04940 hypothetical protein; 78.4 4.9 0.00011 35.9 5.5 59 146-220 39-97 (180)
112 PLN02719 triacylglycerol lipas 78.2 5.4 0.00012 41.1 6.4 71 147-217 273-347 (518)
113 PLN02733 phosphatidylcholine-s 77.4 5.2 0.00011 40.7 6.1 41 147-190 142-182 (440)
114 PF06342 DUF1057: Alpha/beta h 77.1 20 0.00044 34.3 9.5 104 66-214 31-136 (297)
115 smart00824 PKS_TE Thioesterase 76.2 13 0.00028 31.8 7.7 76 119-213 25-100 (212)
116 PLN02324 triacylglycerol lipas 75.5 7.8 0.00017 39.0 6.6 70 147-217 193-267 (415)
117 PF03283 PAE: Pectinacetyleste 74.8 30 0.00065 34.2 10.5 155 54-216 35-198 (361)
118 PF10081 Abhydrolase_9: Alpha/ 74.8 5.9 0.00013 37.8 5.2 36 147-182 86-121 (289)
119 KOG2183 Prolylcarboxypeptidase 74.4 5.4 0.00012 40.1 5.1 64 119-185 111-182 (492)
120 KOG4627 Kynurenine formamidase 74.3 2.3 5E-05 38.9 2.2 90 130-236 102-191 (270)
121 PF00151 Lipase: Lipase; Inte 73.8 1.2 2.7E-05 43.4 0.4 70 119-193 104-173 (331)
122 PF05677 DUF818: Chlamydia CHL 73.1 8.4 0.00018 37.8 5.9 60 119-186 171-231 (365)
123 KOG3975 Uncharacterized conser 72.7 7.2 0.00016 36.7 5.1 42 145-195 90-131 (301)
124 PLN02761 lipase class 3 family 72.3 9.1 0.0002 39.6 6.3 70 148-217 269-344 (527)
125 PRK06765 homoserine O-acetyltr 71.6 5.8 0.00013 39.6 4.7 52 145-213 142-194 (389)
126 PF05448 AXE1: Acetyl xylan es 70.5 17 0.00037 35.3 7.5 143 52-217 65-211 (320)
127 COG0627 Predicted esterase [Ge 70.4 17 0.00037 35.3 7.5 132 69-218 52-190 (316)
128 KOG1552 Predicted alpha/beta h 69.9 16 0.00034 34.5 6.7 78 119-218 88-166 (258)
129 PLN02847 triacylglycerol lipas 69.8 7.5 0.00016 40.9 5.1 58 152-217 236-294 (633)
130 PLN02802 triacylglycerol lipas 68.7 9.8 0.00021 39.2 5.6 64 148-216 309-372 (509)
131 PLN00413 triacylglycerol lipas 68.3 10 0.00022 38.8 5.6 40 151-193 268-307 (479)
132 KOG2281 Dipeptidyl aminopeptid 67.9 10 0.00022 40.3 5.5 117 68-223 640-770 (867)
133 KOG3101 Esterase D [General fu 67.9 22 0.00048 32.8 7.1 184 40-246 8-206 (283)
134 PLN02408 phospholipase A1 67.5 12 0.00025 37.2 5.7 64 148-216 179-242 (365)
135 KOG4569 Predicted lipase [Lipi 66.8 10 0.00022 37.1 5.1 60 152-217 156-215 (336)
136 PRK10439 enterobactin/ferric e 66.6 15 0.00032 37.0 6.4 36 170-215 288-323 (411)
137 PLN02934 triacylglycerol lipas 66.1 14 0.0003 38.2 6.1 41 151-194 305-345 (515)
138 PLN02162 triacylglycerol lipas 64.6 8.6 0.00019 39.3 4.2 40 151-193 262-301 (475)
139 COG2272 PnbA Carboxylesterase 64.1 26 0.00056 36.0 7.5 32 155-187 166-197 (491)
140 PF07519 Tannase: Tannase and 62.4 20 0.00044 36.8 6.5 86 148-247 97-191 (474)
141 COG0429 Predicted hydrolase of 62.3 69 0.0015 31.4 9.7 121 52-214 59-185 (345)
142 PLN02310 triacylglycerol lipas 61.4 18 0.00038 36.4 5.7 64 148-216 186-250 (405)
143 PF05057 DUF676: Putative seri 60.6 14 0.00031 33.4 4.7 49 146-195 55-103 (217)
144 PF08840 BAAT_C: BAAT / Acyl-C 60.4 6.4 0.00014 35.7 2.3 34 159-192 11-44 (213)
145 PRK14566 triosephosphate isome 57.1 23 0.00049 33.5 5.4 61 147-218 188-248 (260)
146 TIGR01836 PHA_synth_III_C poly 56.8 15 0.00033 35.5 4.4 79 120-217 95-173 (350)
147 PF11187 DUF2974: Protein of u 56.0 24 0.00052 32.4 5.3 40 151-194 69-108 (224)
148 KOG2984 Predicted hydrolase [G 55.6 14 0.0003 33.9 3.5 104 53-192 30-136 (277)
149 PRK14567 triosephosphate isome 55.4 27 0.00059 32.8 5.6 61 147-218 178-238 (253)
150 KOG3079 Uridylate kinase/adeny 55.1 7.2 0.00016 35.0 1.6 16 68-83 5-20 (195)
151 COG2945 Predicted hydrolase of 54.9 12 0.00026 33.9 3.0 59 128-193 68-126 (210)
152 PF07849 DUF1641: Protein of u 54.4 4 8.7E-05 27.4 -0.1 15 331-345 17-31 (42)
153 COG4757 Predicted alpha/beta h 52.4 30 0.00065 32.4 5.2 124 120-249 58-196 (281)
154 COG3208 GrsT Predicted thioest 51.8 17 0.00037 34.0 3.5 64 121-194 35-98 (244)
155 PLN03037 lipase class 3 family 50.5 31 0.00066 35.8 5.5 64 149-216 296-360 (525)
156 PF12740 Chlorophyllase2: Chlo 49.1 35 0.00076 32.2 5.3 40 171-215 92-131 (259)
157 PF06259 Abhydrolase_8: Alpha/ 46.5 33 0.00072 30.4 4.5 65 118-190 62-129 (177)
158 PF12146 Hydrolase_4: Putative 44.6 51 0.0011 24.9 4.7 78 54-158 2-79 (79)
159 PRK07868 acyl-CoA synthetase; 42.2 78 0.0017 35.5 7.6 38 170-216 141-178 (994)
160 PLN02429 triosephosphate isome 41.5 52 0.0011 32.0 5.3 60 148-218 239-299 (315)
161 TIGR01838 PHA_synth_I poly(R)- 40.2 1.4E+02 0.003 31.3 8.5 85 120-218 221-305 (532)
162 KOG1553 Predicted alpha/beta h 40.1 46 0.001 32.9 4.7 56 142-212 287-342 (517)
163 PF07819 PGAP1: PGAP1-like pro 39.8 45 0.00098 30.5 4.5 64 148-218 61-127 (225)
164 PF00681 Plectin: Plectin repe 38.0 18 0.00039 24.4 1.1 33 212-244 11-43 (45)
165 PF00756 Esterase: Putative es 37.3 20 0.00043 32.5 1.7 56 149-218 98-153 (251)
166 KOG3877 NADH:ubiquinone oxidor 37.3 41 0.00089 32.4 3.7 50 116-182 67-116 (393)
167 PLN02561 triosephosphate isome 37.2 69 0.0015 30.1 5.2 59 148-217 180-239 (253)
168 PF02450 LCAT: Lecithin:choles 36.5 53 0.0011 32.7 4.7 41 148-192 101-141 (389)
169 PF03583 LIP: Secretory lipase 36.1 98 0.0021 29.4 6.3 66 148-218 46-116 (290)
170 PRK00042 tpiA triosephosphate 35.9 1E+02 0.0022 28.9 6.1 59 148-218 180-239 (250)
171 PF01083 Cutinase: Cutinase; 35.6 74 0.0016 28.0 5.0 79 124-217 44-125 (179)
172 PF08139 LPAM_1: Prokaryotic m 35.6 43 0.00093 20.0 2.3 14 2-15 6-19 (25)
173 KOG3724 Negative regulator of 33.5 54 0.0012 35.8 4.3 97 67-184 87-196 (973)
174 PRK15492 triosephosphate isome 33.1 89 0.0019 29.5 5.3 59 148-218 189-248 (260)
175 PF03403 PAF-AH_p_II: Platelet 33.0 29 0.00062 34.5 2.1 37 171-218 229-265 (379)
176 COG0412 Dienelactone hydrolase 30.8 77 0.0017 29.2 4.5 44 147-191 90-133 (236)
177 PF06821 Ser_hydrolase: Serine 29.9 58 0.0013 28.5 3.3 39 169-216 54-92 (171)
178 KOG1516 Carboxylesterase and r 29.8 2.3E+02 0.005 29.1 8.3 33 155-188 181-213 (545)
179 PRK14565 triosephosphate isome 29.0 1.1E+02 0.0024 28.5 5.1 53 147-218 173-225 (237)
180 COG4782 Uncharacterized protei 28.8 93 0.002 30.9 4.8 47 170-218 191-237 (377)
181 PRK06762 hypothetical protein; 28.8 35 0.00075 29.0 1.7 13 71-83 2-14 (166)
182 PF01456 Mucin: Mucin-like gly 28.7 45 0.00097 28.0 2.3 23 1-23 1-23 (143)
183 PRK13962 bifunctional phosphog 28.6 1E+02 0.0022 33.0 5.4 61 147-218 574-635 (645)
184 PF04414 tRNA_deacylase: D-ami 28.2 1.2E+02 0.0026 27.8 5.1 48 144-194 104-152 (213)
185 cd00311 TIM Triosephosphate is 27.8 1.4E+02 0.0031 27.7 5.7 59 148-218 176-235 (242)
186 PF15253 STIL_N: SCL-interrupt 27.7 72 0.0016 32.1 3.8 36 40-78 199-235 (410)
187 COG3545 Predicted esterase of 27.0 1.4E+02 0.0031 26.6 5.2 36 169-214 58-93 (181)
188 PTZ00333 triosephosphate isome 26.6 1.3E+02 0.0028 28.3 5.2 60 147-217 182-242 (255)
189 KOG3967 Uncharacterized conser 26.2 1.8E+02 0.0039 27.0 5.8 44 145-194 171-214 (297)
190 PF01738 DLH: Dienelactone hyd 26.0 55 0.0012 29.1 2.6 41 148-189 77-117 (218)
191 PF15613 WHIM2: WSTF, HB1, Itc 26.0 1.3E+02 0.0029 19.7 3.6 28 54-81 11-38 (38)
192 PF09292 Neil1-DNA_bind: Endon 26.0 40 0.00086 22.1 1.1 11 71-81 25-35 (39)
193 PHA03376 BARF1; Provisional 25.8 1.5E+02 0.0032 27.0 5.1 65 3-79 1-65 (221)
194 PRK03995 hypothetical protein; 25.6 1.3E+02 0.0027 28.6 4.9 48 144-194 156-203 (267)
195 PF04446 Thg1: tRNAHis guanyly 25.5 87 0.0019 26.5 3.5 50 122-178 23-73 (135)
196 PF07389 DUF1500: Protein of u 24.5 56 0.0012 25.6 1.9 26 152-179 8-33 (100)
197 KOG2382 Predicted alpha/beta h 23.9 88 0.0019 30.4 3.6 53 121-181 82-134 (315)
198 COG4425 Predicted membrane pro 23.8 1E+02 0.0022 31.7 4.0 37 146-182 373-409 (588)
199 COG5510 Predicted small secret 23.7 57 0.0012 22.1 1.6 21 3-23 2-23 (44)
200 PF06309 Torsin: Torsin; Inte 23.5 69 0.0015 26.9 2.4 17 67-83 49-65 (127)
201 PF01583 APS_kinase: Adenylyls 22.8 52 0.0011 28.6 1.6 14 70-83 1-14 (156)
202 PF08194 DIM: DIM protein; In 22.3 91 0.002 20.3 2.3 15 2-16 2-16 (36)
203 COG3571 Predicted hydrolase of 22.3 58 0.0013 28.9 1.8 28 166-193 85-112 (213)
204 COG1647 Esterase/lipase [Gener 22.0 2.5E+02 0.0054 26.2 5.9 52 148-218 70-121 (243)
205 KOG2182 Hydrolytic enzymes of 21.5 2.2E+02 0.0047 29.6 5.9 69 120-189 119-191 (514)
206 PF10929 DUF2811: Protein of u 21.1 94 0.002 22.4 2.4 22 148-169 5-26 (57)
207 cd01853 Toc34_like Toc34-like 20.8 5.1E+02 0.011 24.0 8.0 99 66-182 26-127 (249)
208 PF05277 DUF726: Protein of un 20.6 2.8E+02 0.0062 27.3 6.5 77 151-250 202-278 (345)
209 PF15169 DUF4564: Domain of un 20.5 1.3E+02 0.0028 27.0 3.6 45 119-166 122-166 (187)
No 1
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=100.00 E-value=2e-89 Score=678.67 Aligned_cols=302 Identities=47% Similarity=0.799 Sum_probs=270.1
Q ss_pred cccccCCccccCCCCCCCCCceeEEEEEEeCCCCCeeEEEEEEecCCCCCCCCeEEEecCCCCcccccccchhcCceEEc
Q 018994 19 QPAASHSTVKFLPGFQGPLPFELETGYVGVGESEEAQLFYYFVKSDKNPKEDPLLLWLTGGPGCSAFSGLAYEIGPVNFN 98 (348)
Q Consensus 19 ~~~~~~~~v~~lpg~~~~~~~~~~sGyl~v~~~~~~~lfy~f~es~~~p~~~PlvlwlnGGPG~SS~~g~~~e~GP~~~~ 98 (348)
.++.++++|+.|||++.+++|++|||||+|++..+++|||||+||+++|++|||||||||||||||+.|+|.|+|||+++
T Consensus 22 ~~~~~~~~I~~LPG~~~~~~f~~ysGYv~v~~~~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl~G~~~E~GPf~v~ 101 (454)
T KOG1282|consen 22 HHVDEADLIKSLPGQPGPLPFKQYSGYVTVNESEGRQLFYWFFESENNPETDPLVLWLNGGPGCSSLGGLFEENGPFRVK 101 (454)
T ss_pred cccchhhhhhcCCCCCCCCCcccccceEECCCCCCceEEEEEEEccCCCCCCCEEEEeCCCCCccchhhhhhhcCCeEEc
Confidence 46667899999999988899999999999998889999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCeeeccCCCCCCCCceEEEeCCCcccccccccCCCCCcCchhhHHHHHHHHHHHHhhCCCCCCCCeEEEeec
Q 018994 99 TVEYNGSLPTLRLNPYSWTKEASILFVDSPVGTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDS 178 (348)
Q Consensus 99 ~~~~~g~~~~l~~n~~sW~~~anllfiD~PvG~GfSy~~~~~~~~~~d~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GES 178 (348)
.++ .+|..|||||||.||||||||||||||||+++..++.++|+.+|+|+++||++||++||||++|||||+|||
T Consensus 102 ~~G-----~tL~~N~ySWnk~aNiLfLd~PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GES 176 (454)
T KOG1282|consen 102 YNG-----KTLYLNPYSWNKEANILFLDQPVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGES 176 (454)
T ss_pred CCC-----CcceeCCccccccccEEEEecCCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEeccc
Confidence 543 369999999999999999999999999999998888889999999999999999999999999999999999
Q ss_pred ccCccHHHHHHHHHhhcccccCCeeeeceeEecCCccCccccccccccccccCCCCCHHHHHHHHhHhcC---CCCCCCC
Q 018994 179 YSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTDMVVEQNSQIPFAHGMGLISNELYESLKITCGG---EYVNVDP 255 (348)
Q Consensus 179 YgG~yvp~la~~i~~~~~~~~~~~inlkGi~igng~~d~~~~~~~~~~~~~~~gli~~~~~~~~~~~C~~---~y~~~~~ 255 (348)
|||||||+||++|++.|+....+.|||||++||||++|+..|.+++++|+|.||+||+++++.+++.|.+ ++....+
T Consensus 177 YAG~YVP~La~~I~~~N~~~~~~~iNLkG~~IGNg~td~~~~~~~~~~~a~~h~liSde~~~~l~~~C~~~~~~~~~~~~ 256 (454)
T KOG1282|consen 177 YAGHYVPALAQEILKGNKKCCKPNINLKGYAIGNGLTDPEIDYNGRIPFAWGHGLISDELYESLKRACDFSSDNYANVDP 256 (454)
T ss_pred ccceehHHHHHHHHhccccccCCcccceEEEecCcccCccccccchhhhhhhcccCCHHHHHHHHHHhccCcccccccCC
Confidence 9999999999999999976556789999999999999999999999999999999999999999999986 4544445
Q ss_pred ChhhHHHHHHhhh-hhcCCCcccccccCccCCCCCCCcccccccccccccccccccCCCCCCCCCcccccccchhhhhhc
Q 018994 256 NNKDCLNDIQTFS-KLTSGVEKSHILEPHCQFFSPKPRASSRNRRSLNVNEQSQEFLDPEPTFPPIGCRSYGYLLARYWD 334 (348)
Q Consensus 256 ~~~~C~~~~~~~~-~~~~~in~YnI~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pC~~~~~~~~~~Yl 334 (348)
.+..|.++++++. ++.++||.|+|+.+.|...++ . + + ..+....+++|.+. ..++||
T Consensus 257 ~~~~C~~~~~~~~~~~~~~i~~y~i~~~~C~~~~~--~-----~----~--------~~~~~~~~~~c~~~---~~~~yl 314 (454)
T KOG1282|consen 257 SNTKCNKAVEEFDSKTTGDIDNYYILTPDCYPTSY--E-----L----K--------KPTDCYGYDPCLSD---YAEKYL 314 (454)
T ss_pred chhHHHHHHHHHHHHHhccCchhhhcchhhccccc--c-----c----c--------ccccccccCCchhh---hHHHhc
Confidence 5778999999998 777899999999999975211 0 0 0 12234567899542 338999
Q ss_pred CchHHHHhcCCCC
Q 018994 335 NDHNVRKALHIRQ 347 (348)
Q Consensus 335 N~p~Vq~ALhV~~ 347 (348)
|+|+||+||||++
T Consensus 315 N~~~VrkALh~~~ 327 (454)
T KOG1282|consen 315 NRPEVRKALHANK 327 (454)
T ss_pred CCHHHHHHhCCCC
Confidence 9999999999975
No 2
>PLN02209 serine carboxypeptidase
Probab=100.00 E-value=4.2e-78 Score=601.55 Aligned_cols=310 Identities=54% Similarity=1.005 Sum_probs=263.2
Q ss_pred HHHHHHhhcccccCCccccCCCCCCCCCceeEEEEEEeCCCCCeeEEEEEEecCCCCCCCCeEEEecCCCCcccccccch
Q 018994 11 LLLLQLCMQPAASHSTVKFLPGFQGPLPFELETGYVGVGESEEAQLFYYFVKSDKNPKEDPLLLWLTGGPGCSAFSGLAY 90 (348)
Q Consensus 11 ~~~~~~~~~~~~~~~~v~~lpg~~~~~~~~~~sGyl~v~~~~~~~lfy~f~es~~~p~~~PlvlwlnGGPG~SS~~g~~~ 90 (348)
|+++|+++.++++.|+|++|||+.++++++++|||++|++..+++|||||+|++.+|+++||+|||||||||||+.|+|.
T Consensus 9 ~~~~~~~~~~~~~~~~v~~lpg~~~~~~~~~~sGy~~v~~~~~~~lf~~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~f~ 88 (437)
T PLN02209 9 LLILLVSSHHVRSGSIVKFLPGFKGPLPFELETGYIGIGEEENVQFFYYFIKSDKNPQEDPLIIWLNGGPGCSCLSGLFF 88 (437)
T ss_pred HHHHHHhcccCCccCeeecCCCCCCCCCeeEEEEEEEecCCCCeEEEEEEEecCCCCCCCCEEEEECCCCcHHHhhhHHH
Confidence 33444555677778999999999888999999999999877778999999999999999999999999999999999999
Q ss_pred hcCceEEccCCCCCCCCeeeccCCCCCCCCceEEEeCCCcccccccccCCCCCcCchhhHHHHHHHHHHHHhhCCCCCCC
Q 018994 91 EIGPVNFNTVEYNGSLPTLRLNPYSWTKEASILFVDSPVGTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISN 170 (348)
Q Consensus 91 e~GP~~~~~~~~~g~~~~l~~n~~sW~~~anllfiD~PvG~GfSy~~~~~~~~~~d~~~a~~~~~fL~~f~~~~p~~~~~ 170 (348)
|+|||+++.++.+|..+++++||+||+++|||||||||+||||||+.+...+ .+++++|+++++||+.||++||+|+++
T Consensus 89 e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~-~~~~~~a~~~~~fl~~f~~~~p~~~~~ 167 (437)
T PLN02209 89 ENGPLALKNKVYNGSVPSLVSTTYSWTKTANIIFLDQPVGSGFSYSKTPIER-TSDTSEVKKIHEFLQKWLIKHPQFLSN 167 (437)
T ss_pred hcCCceeccCCCCCCcccceeCCCchhhcCcEEEecCCCCCCccCCCCCCCc-cCCHHHHHHHHHHHHHHHHhCccccCC
Confidence 9999999875433333579999999999999999999999999998765444 456677899999999999999999999
Q ss_pred CeEEEeecccCccHHHHHHHHHhhcccccCCeeeeceeEecCCccCccccccccccccccCCCCCHHHHHHHHhHhcCCC
Q 018994 171 PFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTDMVVEQNSQIPFAHGMGLISNELYESLKITCGGEY 250 (348)
Q Consensus 171 ~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inlkGi~igng~~d~~~~~~~~~~~~~~~gli~~~~~~~~~~~C~~~y 250 (348)
|+||+||||||||||.||++|.++|++...+.||||||+||||++||..|..++.+|+|.||+|++++++.+++.|...+
T Consensus 168 ~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng~td~~~q~~~~~~y~~~~glI~~~~~~~~~~~c~~~~ 247 (437)
T PLN02209 168 PFYVVGDSYSGMIVPALVHEISKGNYICCNPPINLQGYVLGNPITHIEFEQNFRIPYAHGMSLISDELYESLKRICKGNY 247 (437)
T ss_pred CEEEEecCcCceehHHHHHHHHhhcccccCCceeeeeEEecCcccChhhhhhhHHHHHhccCCCCHHHHHHHHHhccccc
Confidence 99999999999999999999999886555568999999999999999999999999999999999999999999997644
Q ss_pred CCCCCChhhHHHHHHhhhhhcCCCcccccccCccCCCCCCCcccccccccccccccccccCCCCCCCCCcccccccchhh
Q 018994 251 VNVDPNNKDCLNDIQTFSKLTSGVEKSHILEPHCQFFSPKPRASSRNRRSLNVNEQSQEFLDPEPTFPPIGCRSYGYLLA 330 (348)
Q Consensus 251 ~~~~~~~~~C~~~~~~~~~~~~~in~YnI~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pC~~~~~~~~ 330 (348)
...++.+..|.++++++..+.+.+|+|+++.+.|.... . .....+|..+.....
T Consensus 248 ~~~~~~~~~C~~~i~~~~~~~~~~~~~~~~~~~c~~~~---~-----------------------~~~~~~c~~~~~~~~ 301 (437)
T PLN02209 248 FSVDPSNKKCLKLVEEYHKCTDNINSHHTLIANCDDSN---T-----------------------QHISPDCYYYPYHLV 301 (437)
T ss_pred ccCCCChHHHHHHHHHHHHHhhcCCccccccccccccc---c-----------------------ccCCCCcccccHHHH
Confidence 33334567899999998888889999987766685310 0 001245743323456
Q ss_pred hhhcCchHHHHhcCCCC
Q 018994 331 RYWDNDHNVRKALHIRQ 347 (348)
Q Consensus 331 ~~YlN~p~Vq~ALhV~~ 347 (348)
+.|||+|+||+||||+.
T Consensus 302 ~~ylN~~~V~~aL~v~~ 318 (437)
T PLN02209 302 ECWANNESVREALHVDK 318 (437)
T ss_pred HHHhCCHHHHHHhCCCC
Confidence 89999999999999973
No 3
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=100.00 E-value=2e-77 Score=596.50 Aligned_cols=296 Identities=56% Similarity=1.023 Sum_probs=256.0
Q ss_pred ccCCccccCCCCCCCCCceeEEEEEEeCCCCCeeEEEEEEecCCCCCCCCeEEEecCCCCcccccccchhcCceEEccCC
Q 018994 22 ASHSTVKFLPGFQGPLPFELETGYVGVGESEEAQLFYYFVKSDKNPKEDPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVE 101 (348)
Q Consensus 22 ~~~~~v~~lpg~~~~~~~~~~sGyl~v~~~~~~~lfy~f~es~~~p~~~PlvlwlnGGPG~SS~~g~~~e~GP~~~~~~~ 101 (348)
...+.|++|||+.++++++++|||++|++..+.++||||+||+.+|+++||||||||||||||+.|+|.|+|||+++.+.
T Consensus 18 ~~~~~v~~lpg~~~~~~~~~~sGy~~v~~~~~~~lfy~f~es~~~~~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~ 97 (433)
T PLN03016 18 DSASIVKFLPGFEGPLPFELETGYIGIGEDENVQFFYYFIKSENNPKEDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEV 97 (433)
T ss_pred cccCeeecCcCCCCCCCeeEEEEEEEecCCCCeEEEEEEEecCCCcccCCEEEEEcCCCcHHHHHHHHHhcCCceeeccc
Confidence 45588999999988899999999999987667899999999999999999999999999999999999999999997542
Q ss_pred CCCCCCeeeccCCCCCCCCceEEEeCCCcccccccccCCCCCcCchhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccC
Q 018994 102 YNGSLPTLRLNPYSWTKEASILFVDSPVGTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSG 181 (348)
Q Consensus 102 ~~g~~~~l~~n~~sW~~~anllfiD~PvG~GfSy~~~~~~~~~~d~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG 181 (348)
.++..+++++||+||+++|||||||||+||||||+.+...+ .+|.++|+++++||++||++||+|+++|+||+||||||
T Consensus 98 ~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~-~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG 176 (433)
T PLN03016 98 FNGSAPSLFSTTYSWTKMANIIFLDQPVGSGFSYSKTPIDK-TGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSG 176 (433)
T ss_pred cCCCCCceeeCCCchhhcCcEEEecCCCCCCccCCCCCCCc-cCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccc
Confidence 22222579999999999999999999999999998765443 46667789999999999999999999999999999999
Q ss_pred ccHHHHHHHHHhhcccccCCeeeeceeEecCCccCccccccccccccccCCCCCHHHHHHHHhHhcCCCCCCCCChhhHH
Q 018994 182 ITVPALVQRISNENEEDIKPLINLQGYILGNPRTDMVVEQNSQIPFAHGMGLISNELYESLKITCGGEYVNVDPNNKDCL 261 (348)
Q Consensus 182 ~yvp~la~~i~~~~~~~~~~~inlkGi~igng~~d~~~~~~~~~~~~~~~gli~~~~~~~~~~~C~~~y~~~~~~~~~C~ 261 (348)
||||.+|++|+++|+....+.||||||+||||+++|..|..++.+|+|.||||++++++.+++.|...+....+.+..|.
T Consensus 177 ~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~t~~~~~~~~~~~y~~~~glI~~~~~~~i~~~c~~~~~~~~~~~~~C~ 256 (433)
T PLN03016 177 MIVPALVQEISQGNYICCEPPINLQGYMLGNPVTYMDFEQNFRIPYAYGMGLISDEIYEPMKRICNGNYYNVDPSNTQCL 256 (433)
T ss_pred eehHHHHHHHHhhcccccCCcccceeeEecCCCcCchhhhhhHHHHHHhcCCCCHHHHHHHHHHhccccccCCCchHHHH
Confidence 99999999999988755556899999999999999999999999999999999999999999999765433334567899
Q ss_pred HHHHhhhhhcCCCcccccccCccCCCCCCCcccccccccccccccccccCCCCCCCCCcccccccchhhhhhcCchHHHH
Q 018994 262 NDIQTFSKLTSGVEKSHILEPHCQFFSPKPRASSRNRRSLNVNEQSQEFLDPEPTFPPIGCRSYGYLLARYWDNDHNVRK 341 (348)
Q Consensus 262 ~~~~~~~~~~~~in~YnI~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pC~~~~~~~~~~YlN~p~Vq~ 341 (348)
.+++.+.++.+++|+|||+.+.|... .. ....|..+....++.|||+|+||+
T Consensus 257 ~~~~~~~~~~~~~n~yni~~~~~~~~---~~-------------------------~~~~c~~~~~~~~~~ylN~~~V~~ 308 (433)
T PLN03016 257 KLTEEYHKCTAKINIHHILTPDCDVT---NV-------------------------TSPDCYYYPYHLIECWANDESVRE 308 (433)
T ss_pred HHHHHHHHHhcCCChhhccCCccccc---cc-------------------------CCCcccccchHHHHHHhCCHHHHH
Confidence 99999988999999999998867320 00 013575433345689999999999
Q ss_pred hcCCC
Q 018994 342 ALHIR 346 (348)
Q Consensus 342 ALhV~ 346 (348)
||||+
T Consensus 309 aL~v~ 313 (433)
T PLN03016 309 ALHIE 313 (433)
T ss_pred HhCCC
Confidence 99996
No 4
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=100.00 E-value=8.9e-74 Score=566.23 Aligned_cols=286 Identities=37% Similarity=0.648 Sum_probs=231.4
Q ss_pred CCCCCCCCceeEEEEEEeCCCCCeeEEEEEEecCCCCCCCCeEEEecCCCCcccccccchhcCceEEccCCCCCCCCeee
Q 018994 31 PGFQGPLPFELETGYVGVGESEEAQLFYYFVKSDKNPKEDPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLR 110 (348)
Q Consensus 31 pg~~~~~~~~~~sGyl~v~~~~~~~lfy~f~es~~~p~~~PlvlwlnGGPG~SS~~g~~~e~GP~~~~~~~~~g~~~~l~ 110 (348)
||+..++++++|||||+|+++.+++|||||+|++.+|+++||||||||||||||++|+|.|+|||+++.++ ..+++
T Consensus 1 pg~~~~~~~~~~sGyl~~~~~~~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~----~~~l~ 76 (415)
T PF00450_consen 1 PGLDEPVPFKQYSGYLPVNDNENAHLFYWFFESRNDPEDDPLILWLNGGPGCSSMWGLFGENGPFRINPDG----PYTLE 76 (415)
T ss_dssp TT-SS-SSSEEEEEEEEECTTTTEEEEEEEEE-SSGGCSS-EEEEEE-TTTB-THHHHHCTTSSEEEETTS----TSEEE
T ss_pred CCCCCCCCceEEEEEEecCCCCCcEEEEEEEEeCCCCCCccEEEEecCCceeccccccccccCceEEeecc----ccccc
Confidence 88888899999999999997778999999999999999999999999999999999999999999999432 15799
Q ss_pred ccCCCCCCCCceEEEeCCCcccccccccCCCCCcCchhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHH
Q 018994 111 LNPYSWTKEASILFVDSPVGTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQR 190 (348)
Q Consensus 111 ~n~~sW~~~anllfiD~PvG~GfSy~~~~~~~~~~d~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~ 190 (348)
.||+||+++||||||||||||||||+.+...+..+++++|+++++||+.||.+||+|+++||||+||||||||||.+|.+
T Consensus 77 ~n~~sW~~~an~l~iD~PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~ 156 (415)
T PF00450_consen 77 DNPYSWNKFANLLFIDQPVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASY 156 (415)
T ss_dssp E-TT-GGGTSEEEEE--STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHH
T ss_pred ccccccccccceEEEeecCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHh
Confidence 99999999999999999999999999887667789999999999999999999999999999999999999999999999
Q ss_pred HHhhcccccCCeeeeceeEecCCccCccccccccccccccCCCCCHHHHHHHHhHhcCCCCCCCCChhhHHHHHHhhhh-
Q 018994 191 ISNENEEDIKPLINLQGYILGNPRTDMVVEQNSQIPFAHGMGLISNELYESLKITCGGEYVNVDPNNKDCLNDIQTFSK- 269 (348)
Q Consensus 191 i~~~~~~~~~~~inlkGi~igng~~d~~~~~~~~~~~~~~~gli~~~~~~~~~~~C~~~y~~~~~~~~~C~~~~~~~~~- 269 (348)
|++++..+..+.||||||+||||++||..+..++.+|+|.||+|++++++.+.+.|.... ........|...++.+..
T Consensus 157 i~~~~~~~~~~~inLkGi~IGng~~dp~~~~~s~~~~~~~~gli~~~~~~~~~~~~~~~~-~~~~~~~~c~~~~~~~~~~ 235 (415)
T PF00450_consen 157 ILQQNKKGDQPKINLKGIAIGNGWIDPRIQYNSYADYAYYHGLIDDQQYDDLNKACEACP-QCQKAITECAAALDELSCQ 235 (415)
T ss_dssp HHHHTCC--STTSEEEEEEEESE-SBHHHHHHHHHHHHHHTTSS-HHHHHHHHHHHTTSH-SSSCCHHHHHHHHHHHHHH
T ss_pred hhhccccccccccccccceecCccccccccceeecccccccCcccHHHHHHHHHHhhccc-cccchhhHHHHHHHhhhhh
Confidence 999997765678999999999999999999999999999999999999999999996421 112346789999888765
Q ss_pred -----hcCCCcccccccCccCCCCCCCcccccccccccccccccccCCCCCCCCCcccccccchhhhhhcCchHHHHhcC
Q 018994 270 -----LTSGVEKSHILEPHCQFFSPKPRASSRNRRSLNVNEQSQEFLDPEPTFPPIGCRSYGYLLARYWDNDHNVRKALH 344 (348)
Q Consensus 270 -----~~~~in~YnI~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pC~~~~~~~~~~YlN~p~Vq~ALh 344 (348)
+.+++|+|||+.++|.. .. . .........|. ....++.|||+++||+|||
T Consensus 236 ~~~~~~~~~~n~Ydi~~~~~~~-~~---------~-------------~~~~~~~~~~~--~~~~~~~yln~~~Vr~aL~ 290 (415)
T PF00450_consen 236 YAISQCNGGINPYDIRQPCYNP-SR---------S-------------SYDNSPSNDPP--DDDYLEAYLNRPDVREALH 290 (415)
T ss_dssp CHHHHHHTTSETTSTTSEETT--SH---------C-------------TTCCCCTTTTT--CHHHHHHHHTSHHHHHHTT
T ss_pred cccccccCCcceeeeecccccc-cc---------c-------------ccccccccccc--chhhHHHHhccHHHHHhhC
Confidence 34799999999984431 00 0 00111224453 2356789999999999999
Q ss_pred CC
Q 018994 345 IR 346 (348)
Q Consensus 345 V~ 346 (348)
|+
T Consensus 291 v~ 292 (415)
T PF00450_consen 291 VP 292 (415)
T ss_dssp -S
T ss_pred CC
Confidence 96
No 5
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=100.00 E-value=1.6e-66 Score=523.15 Aligned_cols=274 Identities=28% Similarity=0.468 Sum_probs=227.0
Q ss_pred cCCCCCCCCCceeEEEEEEeCC-CCCeeEEEEEEecCCCCCCCCeEEEecCCCCcccccccchhcCceEEccCCCCCCCC
Q 018994 29 FLPGFQGPLPFELETGYVGVGE-SEEAQLFYYFVKSDKNPKEDPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLP 107 (348)
Q Consensus 29 ~lpg~~~~~~~~~~sGyl~v~~-~~~~~lfy~f~es~~~p~~~PlvlwlnGGPG~SS~~g~~~e~GP~~~~~~~~~g~~~ 107 (348)
++..-..+.++++|+|||+|++ ..+.+||||||||+.+|+++||+|||||||||||+.|+|.|+|||+++.++ .
T Consensus 35 ~~~~~~~~~~~~~~sGy~~v~~~~~~~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~-----~ 109 (462)
T PTZ00472 35 GSGWAPCDPSVNQWSGYFDIPGNQTDKHYFYWAFGPRNGNPEAPVLLWMTGGPGCSSMFALLAENGPCLMNETT-----G 109 (462)
T ss_pred CCCccccCCCCcceeEEEEeCCCCCCceEEEEEEEcCCCCCCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCC-----C
Confidence 3333335667899999999975 446899999999999999999999999999999999999999999999753 3
Q ss_pred eeeccCCCCCCCCceEEEeCCCcccccccccCCCCCcCchhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHH
Q 018994 108 TLRLNPYSWTKEASILFVDSPVGTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPAL 187 (348)
Q Consensus 108 ~l~~n~~sW~~~anllfiD~PvG~GfSy~~~~~~~~~~d~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~l 187 (348)
+++.||+||++.+||||||||+||||||+... ++..+++++|+|+++||+.||++||+++.+|+||+||||||+|+|.+
T Consensus 110 ~~~~n~~sW~~~~~~l~iDqP~G~G~S~~~~~-~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~ 188 (462)
T PTZ00472 110 DIYNNTYSWNNEAYVIYVDQPAGVGFSYADKA-DYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPAT 188 (462)
T ss_pred ceeECCcccccccCeEEEeCCCCcCcccCCCC-CCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHH
Confidence 58999999999999999999999999998654 45677889999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccccCCeeeeceeEecCCccCcccccccccccccc-------CCCCCHHHHHHHHh---HhcC-----CCCC
Q 018994 188 VQRISNENEEDIKPLINLQGYILGNPRTDMVVEQNSQIPFAHG-------MGLISNELYESLKI---TCGG-----EYVN 252 (348)
Q Consensus 188 a~~i~~~~~~~~~~~inlkGi~igng~~d~~~~~~~~~~~~~~-------~gli~~~~~~~~~~---~C~~-----~y~~ 252 (348)
|.+|+++|+.+...+||||||+||||++||.+|..++.+|+|. +|+|++++++++++ .|.. +...
T Consensus 189 a~~i~~~n~~~~~~~inLkGi~IGNg~~dp~~q~~~~~~~a~~~~~~~~~~~li~~~~~~~~~~~~~~c~~~~~~c~~~~ 268 (462)
T PTZ00472 189 AYRINMGNKKGDGLYINLAGLAVGNGLTDPYTQYASYPRLAWDWCKEKLGAPCVSEEAYDEMSSMVPACQKKIKECNSNP 268 (462)
T ss_pred HHHHHhhccccCCceeeeEEEEEeccccChhhhcccHHHHhhhcccccCCCCccCHHHHHHHHHHHHHHHHHHHhccccC
Confidence 9999999876666789999999999999999999999999985 58999999888865 3421 1100
Q ss_pred CCCChhhH-------HHHHHhhhhhcCCCcccccccCccCCCCCCCcccccccccccccccccccCCCCCCCCCcccccc
Q 018994 253 VDPNNKDC-------LNDIQTFSKLTSGVEKSHILEPHCQFFSPKPRASSRNRRSLNVNEQSQEFLDPEPTFPPIGCRSY 325 (348)
Q Consensus 253 ~~~~~~~C-------~~~~~~~~~~~~~in~YnI~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pC~~~ 325 (348)
......| ..+++.+. .+++|+|||+.+ |.. ++|.+
T Consensus 269 -~~~~~~c~~a~~~c~~~~~~~~--~~g~n~Ydi~~~-c~~---------------------------------~~c~~- 310 (462)
T PTZ00472 269 -DDADSSCSVARALCNEYIAVYS--ATGLNNYDIRKP-CIG---------------------------------PLCYN- 310 (462)
T ss_pred -CCcchHHHHHHHHHHHHHHHHH--hcCCChhheecc-CCC---------------------------------CCccC-
Confidence 1122235 44333221 368999999987 731 34743
Q ss_pred cchhhhhhcCchHHHHhcCCCC
Q 018994 326 GYLLARYWDNDHNVRKALHIRQ 347 (348)
Q Consensus 326 ~~~~~~~YlN~p~Vq~ALhV~~ 347 (348)
...++.|||+|+||+||||+.
T Consensus 311 -~~~~~~yLN~~~Vq~AL~v~~ 331 (462)
T PTZ00472 311 -MDNTIAFMNREDVQSSLGVKP 331 (462)
T ss_pred -HHHHHHHhCCHHHHHHhCCCC
Confidence 245789999999999999963
No 6
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=100.00 E-value=5.4e-50 Score=394.43 Aligned_cols=225 Identities=29% Similarity=0.552 Sum_probs=184.5
Q ss_pred eEEEEEEecCCCCCCCCeEEEecCCCCcccccccchhcCceEEccCCCCCCCCeeeccCCCCCCCCceEEEeCCCccccc
Q 018994 55 QLFYYFVKSDKNPKEDPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEASILFVDSPVGTGFS 134 (348)
Q Consensus 55 ~lfy~f~es~~~p~~~PlvlwlnGGPG~SS~~g~~~e~GP~~~~~~~~~g~~~~l~~n~~sW~~~anllfiD~PvG~GfS 134 (348)
.+|||++++.++|.++|++|||||||||||++|+|+|+||++|+.+. + |.-..||+||++++||||||||+|||||
T Consensus 86 ~~ffy~fe~~ndp~~rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~--~--P~~~~NP~SW~~~adLvFiDqPvGTGfS 161 (498)
T COG2939 86 FFFFYTFESPNDPANRPVIFWLNGGPGCSSVTGLLGELGPKRIQSGT--S--PSYPDNPGSWLDFADLVFIDQPVGTGFS 161 (498)
T ss_pred eEEEEEecCCCCCCCCceEEEecCCCChHhhhhhhhhcCCeeeeCCC--C--CCCCCCccccccCCceEEEecCcccCcc
Confidence 38889999999999999999999999999999999999999998652 1 2222799999999999999999999999
Q ss_pred ccccCCCCCcCchhhHHHHHHHHHHHHhhCCCCCCC--CeEEEeecccCccHHHHHHHHHhhcccccCCeeeeceeEecC
Q 018994 135 YARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISN--PFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGN 212 (348)
Q Consensus 135 y~~~~~~~~~~d~~~a~~~~~fL~~f~~~~p~~~~~--~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inlkGi~ign 212 (348)
|+.. .....+-..+.+|++.|++.||+.||++.+. |+||+||||||+|+|.||++|++++.. ....+||++++|||
T Consensus 162 ~a~~-~e~~~d~~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~-~~~~~nlssvlign 239 (498)
T COG2939 162 RALG-DEKKKDFEGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIA-LNGNVNLSSVLIGN 239 (498)
T ss_pred cccc-cccccchhccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccc-cCCceEeeeeeecC
Confidence 9832 2345566678899999999999999999887 999999999999999999999998632 23479999999999
Q ss_pred C-ccCccccccccccccc----cCCCCCHHHHHHHHhHhcCCCCC-------CCCChhhHHHHHHhhhhhc------CC-
Q 018994 213 P-RTDMVVEQNSQIPFAH----GMGLISNELYESLKITCGGEYVN-------VDPNNKDCLNDIQTFSKLT------SG- 273 (348)
Q Consensus 213 g-~~d~~~~~~~~~~~~~----~~gli~~~~~~~~~~~C~~~y~~-------~~~~~~~C~~~~~~~~~~~------~~- 273 (348)
| +|||..+...+..++- .++..+.+..+++++.|.+++.. .......|..+...+.... .+
T Consensus 240 g~~t~Pl~~~~~y~~~a~~~~~~~~~l~~e~~~~~~~~~~~d~~~~l~~g~~~~~~~~~c~~~~~~~~~~~~~~~~r~~~ 319 (498)
T COG2939 240 GLWTDPLTQYLTYEPIAAEKGPYDGVLSSEECTKAEKYCAGDYCLALMKGCYDSGSLQPCENASAYLTGLMREYVGRAGG 319 (498)
T ss_pred CcccChhHHHHHhhhhHhhcCCCCCcCcHHHHHHHHHHhhhhhHhhhccCCCCchhhhHHHHHHHHHHhcchhhhccccc
Confidence 9 9999998888888875 45666778889999989764421 1122346877776665432 34
Q ss_pred --CcccccccCccCC
Q 018994 274 --VEKSHILEPHCQF 286 (348)
Q Consensus 274 --in~YnI~~~~C~~ 286 (348)
+|+|||... |..
T Consensus 320 ~~~n~y~~r~~-~~d 333 (498)
T COG2939 320 RLLNVYDIREE-CRD 333 (498)
T ss_pred cccccccchhh-cCC
Confidence 899999987 853
No 7
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=100.00 E-value=5.9e-47 Score=365.19 Aligned_cols=199 Identities=52% Similarity=0.908 Sum_probs=167.9
Q ss_pred CCceEEEeCCCcccccccccCCCCCcCchhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhcccc
Q 018994 119 EASILFVDSPVGTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEED 198 (348)
Q Consensus 119 ~anllfiD~PvG~GfSy~~~~~~~~~~d~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~ 198 (348)
+|||||||||+||||||+.+...+ .+|+++|+|++.||+.||++||+|+++||||+||||||||||.||.+|+++|..+
T Consensus 1 ~aNvLfiDqPvGvGfSy~~~~~~~-~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~ 79 (319)
T PLN02213 1 MANIIFLDQPVGSGFSYSKTPIDK-TGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYIC 79 (319)
T ss_pred CccEEEecCCCCCCCCCCCCCCCc-cccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccc
Confidence 589999999999999998765443 4666778999999999999999999999999999999999999999999988655
Q ss_pred cCCeeeeceeEecCCccCccccccccccccccCCCCCHHHHHHHHhHhcCCCCCCCCChhhHHHHHHhhhhhcCCCcccc
Q 018994 199 IKPLINLQGYILGNPRTDMVVEQNSQIPFAHGMGLISNELYESLKITCGGEYVNVDPNNKDCLNDIQTFSKLTSGVEKSH 278 (348)
Q Consensus 199 ~~~~inlkGi~igng~~d~~~~~~~~~~~~~~~gli~~~~~~~~~~~C~~~y~~~~~~~~~C~~~~~~~~~~~~~in~Yn 278 (348)
..+.||||||+|||||++|..+..++.+|+|.||+|++++++.+++.|...+....+.+..|.++++.+..+.+++|+||
T Consensus 80 ~~~~inLkGi~IGNg~t~~~~~~~~~~~~~~~~gli~~~~~~~~~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~ 159 (319)
T PLN02213 80 CEPPINLQGYMLGNPVTYMDFEQNFRIPYAYGMGLISDEIYEPMKRICNGNYYNVDPSNTQCLKLTEEYHKCTAKINIHH 159 (319)
T ss_pred cCCceeeeEEEeCCCCCCccccchhHhhHHHhcCCCCHHHHHHHHHhcCCCccCCCCCcHHHHHHHHHHHHHHhcCCHhh
Confidence 56689999999999999999999999999999999999999999999976443323445679999998888899999999
Q ss_pred cccCccCCCCCCCcccccccccccccccccccCCCCCCCCCcccccccchhhhhhcCchHHHHhcCCC
Q 018994 279 ILEPHCQFFSPKPRASSRNRRSLNVNEQSQEFLDPEPTFPPIGCRSYGYLLARYWDNDHNVRKALHIR 346 (348)
Q Consensus 279 I~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pC~~~~~~~~~~YlN~p~Vq~ALhV~ 346 (348)
|+.+.|... .. ..+.|..+....++.|||+|+||+||||+
T Consensus 160 ~~~~~~~~~---~~-------------------------~~~~c~~~~~~~~~~ylN~~~V~~aL~v~ 199 (319)
T PLN02213 160 ILTPDCDVT---NV-------------------------TSPDCYYYPYHLIECWANDESVREALHIE 199 (319)
T ss_pred cccCcccCc---cC-------------------------CCCCcccchhHHHHHHhCCHHHHHHhCcC
Confidence 997767320 00 01357432234568999999999999996
No 8
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1e-43 Score=330.36 Aligned_cols=227 Identities=27% Similarity=0.463 Sum_probs=194.3
Q ss_pred eEEEEEEeCCCCCeeEEEEEEecCCCC-CCCCeEEEecCCCCccccc-ccchhcCceEEccCCCCCCCCeeeccCCCCCC
Q 018994 41 LETGYVGVGESEEAQLFYYFVKSDKNP-KEDPLLLWLTGGPGCSAFS-GLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTK 118 (348)
Q Consensus 41 ~~sGyl~v~~~~~~~lfy~f~es~~~p-~~~PlvlwlnGGPG~SS~~-g~~~e~GP~~~~~~~~~g~~~~l~~n~~sW~~ 118 (348)
.-+||++|+. ++++|||.+.+..+. ..+|+.|||+||||+||.. |+|.|+||...+ +.+|+.+|.+
T Consensus 3 ~~wg~v~vr~--~a~~F~wly~~~~~~ks~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~----------~~~r~~TWlk 70 (414)
T KOG1283|consen 3 EDWGYVDVRT--GAHMFWWLYYATANVKSERPLALWLQGGPGASSTGFGNFEELGPLDLD----------GSPRDWTWLK 70 (414)
T ss_pred ccccceeeec--CceEEEEEeeeccccccCCCeeEEecCCCCCCCcCccchhhcCCcccC----------CCcCCchhhh
Confidence 4589999987 799999998876433 7899999999999999975 999999998876 4569999999
Q ss_pred CCceEEEeCCCcccccccccCCCCCcCchhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhcccc
Q 018994 119 EASILFVDSPVGTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEED 198 (348)
Q Consensus 119 ~anllfiD~PvG~GfSy~~~~~~~~~~d~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~ 198 (348)
.|+|||||.|||+||||.+..+.|.++++++|.|+.+.|+.||..||+|+.+||||+-|||||+..+.+|..+.+..+++
T Consensus 71 ~adllfvDnPVGaGfSyVdg~~~Y~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G 150 (414)
T KOG1283|consen 71 DADLLFVDNPVGAGFSYVDGSSAYTTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRG 150 (414)
T ss_pred hccEEEecCCCcCceeeecCcccccccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcC
Confidence 99999999999999999998888999999999999999999999999999999999999999999999999999988765
Q ss_pred cCCeeeeceeEecCCccCccccccccccccccCCCCCHHHHHHHHh---HhcC-----CCCCCCCChhhHHHHHHhhhhh
Q 018994 199 IKPLINLQGYILGNPRTDMVVEQNSQIPFAHGMGLISNELYESLKI---TCGG-----EYVNVDPNNKDCLNDIQTFSKL 270 (348)
Q Consensus 199 ~~~~inlkGi~igng~~d~~~~~~~~~~~~~~~gli~~~~~~~~~~---~C~~-----~y~~~~~~~~~C~~~~~~~~~~ 270 (348)
. .+.|+.||++|++||+|..-..+|.+|+++.+++|+...++..+ .|.+ .+.. ........-+.|...
T Consensus 151 ~-i~~nf~~VaLGDSWISP~D~V~SWGP~L~~~S~LDD~GLds~ns~A~k~~~~v~~g~~~~---AT~~Wg~~e~li~~~ 226 (414)
T KOG1283|consen 151 E-IKLNFIGVALGDSWISPEDFVFSWGPLLKHVSRLDDNGLDSSNSGAEKGKGGVDGGKWGG---ATGGWGGGENLISRE 226 (414)
T ss_pred c-eeecceeEEccCcccChhHhhhcchHHHHhhhhhcccCccchhhhHHhhcccccCCcccc---ccccccCcCcceeec
Confidence 3 47899999999999999988899999999999999987766554 3432 2221 111123333456667
Q ss_pred cCCCcccccccCc
Q 018994 271 TSGVEKSHILEPH 283 (348)
Q Consensus 271 ~~~in~YnI~~~~ 283 (348)
+.++|.|||+.+.
T Consensus 227 sn~VdfYNil~~t 239 (414)
T KOG1283|consen 227 SNGVDFYNILTKT 239 (414)
T ss_pred ccCcceeeeeccC
Confidence 8899999999873
No 9
>PRK00870 haloalkane dehalogenase; Provisional
Probab=98.32 E-value=4.5e-06 Score=79.23 Aligned_cols=140 Identities=17% Similarity=0.277 Sum_probs=86.5
Q ss_pred CCccccCCCCCCCCCceeEEEEEEeCCCCCe--eEEEEEEecCCCCCCCCeEEEecCCCCcccccccchhcCceEEccCC
Q 018994 24 HSTVKFLPGFQGPLPFELETGYVGVGESEEA--QLFYYFVKSDKNPKEDPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVE 101 (348)
Q Consensus 24 ~~~v~~lpg~~~~~~~~~~sGyl~v~~~~~~--~lfy~f~es~~~p~~~PlvlwlnGGPG~SS~~g~~~e~GP~~~~~~~ 101 (348)
..++.+||.++ ..-.|+.++...|. +++|. + .+++ +.|.||+++|.|+.+..+..+. |
T Consensus 8 ~~~~~~~~~~~------~~~~~~~~~~~~~~~~~i~y~--~-~G~~-~~~~lvliHG~~~~~~~w~~~~---~------- 67 (302)
T PRK00870 8 DSRFENLPDYP------FAPHYVDVDDGDGGPLRMHYV--D-EGPA-DGPPVLLLHGEPSWSYLYRKMI---P------- 67 (302)
T ss_pred cccccCCcCCC------CCceeEeecCCCCceEEEEEE--e-cCCC-CCCEEEEECCCCCchhhHHHHH---H-------
Confidence 34677787752 24567888763333 56665 2 2333 4688999999987777653332 1
Q ss_pred CCCCCCeeeccCCCCCCCCceEEEeCCCcccccccccCCCCCcCchhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccC
Q 018994 102 YNGSLPTLRLNPYSWTKEASILFVDSPVGTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSG 181 (348)
Q Consensus 102 ~~g~~~~l~~n~~sW~~~anllfiD~PvG~GfSy~~~~~~~~~~d~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG 181 (348)
.|.. +-.+++.+|.| |.|.|-..... ...+.+..++++.++|+ . ....++.|+|+|+||
T Consensus 68 ------~L~~------~gy~vi~~Dl~-G~G~S~~~~~~-~~~~~~~~a~~l~~~l~----~---l~~~~v~lvGhS~Gg 126 (302)
T PRK00870 68 ------ILAA------AGHRVIAPDLI-GFGRSDKPTRR-EDYTYARHVEWMRSWFE----Q---LDLTDVTLVCQDWGG 126 (302)
T ss_pred ------HHHh------CCCEEEEECCC-CCCCCCCCCCc-ccCCHHHHHHHHHHHHH----H---cCCCCEEEEEEChHH
Confidence 1211 23689999977 99988432111 11233445555555554 2 233589999999999
Q ss_pred ccHHHHHHHHHhhcccccCCeeeeceeEecCCc
Q 018994 182 ITVPALVQRISNENEEDIKPLINLQGYILGNPR 214 (348)
Q Consensus 182 ~yvp~la~~i~~~~~~~~~~~inlkGi~igng~ 214 (348)
..+-.+|.+-.+ .++++++.++.
T Consensus 127 ~ia~~~a~~~p~----------~v~~lvl~~~~ 149 (302)
T PRK00870 127 LIGLRLAAEHPD----------RFARLVVANTG 149 (302)
T ss_pred HHHHHHHHhChh----------heeEEEEeCCC
Confidence 988888874322 27888877764
No 10
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=98.31 E-value=1.9e-06 Score=78.92 Aligned_cols=129 Identities=22% Similarity=0.275 Sum_probs=77.9
Q ss_pred EEEEEEeCCCCCeeEEEEEEecCCCCCCCCeEEEecCCCCccccc-ccchhcCceEEccCCCCCCCCeeeccCCCCCCCC
Q 018994 42 ETGYVGVGESEEAQLFYYFVKSDKNPKEDPLLLWLTGGPGCSAFS-GLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEA 120 (348)
Q Consensus 42 ~sGyl~v~~~~~~~lfy~f~es~~~p~~~PlvlwlnGGPG~SS~~-g~~~e~GP~~~~~~~~~g~~~~l~~n~~sW~~~a 120 (348)
..++++++. ..+.|.-+. .+...|.||+++||||+++.+ ..+.+ .+. + +-.
T Consensus 3 ~~~~~~~~~---~~~~~~~~~---~~~~~~~vl~~hG~~g~~~~~~~~~~~----------------~l~-~-----~g~ 54 (288)
T TIGR01250 3 IEGIITVDG---GYHLFTKTG---GEGEKIKLLLLHGGPGMSHEYLENLRE----------------LLK-E-----EGR 54 (288)
T ss_pred ccceecCCC---CeEEEEecc---CCCCCCeEEEEcCCCCccHHHHHHHHH----------------HHH-h-----cCC
Confidence 345666653 344444322 223468889999999988653 22210 011 1 147
Q ss_pred ceEEEeCCCcccccccccCCCCCcCchhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhcccccC
Q 018994 121 SILFVDSPVGTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIK 200 (348)
Q Consensus 121 nllfiD~PvG~GfSy~~~~~~~~~~d~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~ 200 (348)
+++.+|.| |.|.|.......-..+-+..++++..+++. +...+++|+|+|+||..+..+|..-.
T Consensus 55 ~vi~~d~~-G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~liG~S~Gg~ia~~~a~~~p-------- 118 (288)
T TIGR01250 55 EVIMYDQL-GCGYSDQPDDSDELWTIDYFVDELEEVREK-------LGLDKFYLLGHSWGGMLAQEYALKYG-------- 118 (288)
T ss_pred EEEEEcCC-CCCCCCCCCcccccccHHHHHHHHHHHHHH-------cCCCcEEEEEeehHHHHHHHHHHhCc--------
Confidence 79999987 999986432211012344555655554432 23347999999999999888887421
Q ss_pred CeeeeceeEecCCccC
Q 018994 201 PLINLQGYILGNPRTD 216 (348)
Q Consensus 201 ~~inlkGi~igng~~d 216 (348)
-.++++++.++...
T Consensus 119 --~~v~~lvl~~~~~~ 132 (288)
T TIGR01250 119 --QHLKGLIISSMLDS 132 (288)
T ss_pred --cccceeeEeccccc
Confidence 23788888887653
No 11
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=98.31 E-value=1.7e-06 Score=78.09 Aligned_cols=107 Identities=20% Similarity=0.246 Sum_probs=71.9
Q ss_pred CCCCeEEEecCCCCcccccccchhcCceEEccCCCCCCCCeeeccCCCCCCCCceEEEeCCCcccccccccCCCCCcCch
Q 018994 68 KEDPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEASILFVDSPVGTGFSYARTPHASQTGDF 147 (348)
Q Consensus 68 ~~~PlvlwlnGGPG~SS~~g~~~e~GP~~~~~~~~~g~~~~l~~n~~sW~~~anllfiD~PvG~GfSy~~~~~~~~~~d~ 147 (348)
++.|+||+++|.+|.+..+..+.+ .+ .+..+++-+|.| |.|.|....... .+.+
T Consensus 11 ~~~~~iv~lhG~~~~~~~~~~~~~----------------~l-------~~~~~vi~~D~~-G~G~S~~~~~~~--~~~~ 64 (257)
T TIGR03611 11 ADAPVVVLSSGLGGSGSYWAPQLD----------------VL-------TQRFHVVTYDHR-GTGRSPGELPPG--YSIA 64 (257)
T ss_pred CCCCEEEEEcCCCcchhHHHHHHH----------------HH-------HhccEEEEEcCC-CCCCCCCCCccc--CCHH
Confidence 467999999999877655432220 11 234699999977 999996433222 2445
Q ss_pred hhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhcccccCCeeeeceeEecCCccCc
Q 018994 148 KQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTDM 217 (348)
Q Consensus 148 ~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inlkGi~igng~~d~ 217 (348)
+.++++.++++. ....+++|+|+|+||..+..+|.+..+ .++++++.+++..+
T Consensus 65 ~~~~~~~~~i~~-------~~~~~~~l~G~S~Gg~~a~~~a~~~~~----------~v~~~i~~~~~~~~ 117 (257)
T TIGR03611 65 HMADDVLQLLDA-------LNIERFHFVGHALGGLIGLQLALRYPE----------RLLSLVLINAWSRP 117 (257)
T ss_pred HHHHHHHHHHHH-------hCCCcEEEEEechhHHHHHHHHHHChH----------HhHHheeecCCCCC
Confidence 556666666643 233579999999999999888875332 27888888876554
No 12
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=98.27 E-value=3.6e-06 Score=79.41 Aligned_cols=123 Identities=18% Similarity=0.151 Sum_probs=81.8
Q ss_pred EEEEeCCCCCeeEEEEEEecCCCCCCCCeEEEecCCCCcccccccchhcCceEEccCCCCCCCCeeeccCCCCCCCCceE
Q 018994 44 GYVGVGESEEAQLFYYFVKSDKNPKEDPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEASIL 123 (348)
Q Consensus 44 Gyl~v~~~~~~~lfy~f~es~~~p~~~PlvlwlnGGPG~SS~~g~~~e~GP~~~~~~~~~g~~~~l~~n~~sW~~~anll 123 (348)
=|++++ +.+++|.- . + + ..|.||+++|.++.+..+..+.+ .| .+..+++
T Consensus 11 ~~~~~~---~~~i~y~~--~-G-~-~~~~vlllHG~~~~~~~w~~~~~----------------~L-------~~~~~vi 59 (294)
T PLN02824 11 RTWRWK---GYNIRYQR--A-G-T-SGPALVLVHGFGGNADHWRKNTP----------------VL-------AKSHRVY 59 (294)
T ss_pred ceEEEc---CeEEEEEE--c-C-C-CCCeEEEECCCCCChhHHHHHHH----------------HH-------HhCCeEE
Confidence 366665 46677642 1 2 1 23789999999998887654431 12 2345899
Q ss_pred EEeCCCcccccccccCCC----CCcCchhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhccccc
Q 018994 124 FVDSPVGTGFSYARTPHA----SQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDI 199 (348)
Q Consensus 124 fiD~PvG~GfSy~~~~~~----~~~~d~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~ 199 (348)
.+|.| |.|.|-...... ...+.++.|+++.++|... ...+++|+|+|.||..+-.+|.+-.+
T Consensus 60 ~~Dlp-G~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~l-------~~~~~~lvGhS~Gg~va~~~a~~~p~------ 125 (294)
T PLN02824 60 AIDLL-GYGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSDV-------VGDPAFVICNSVGGVVGLQAAVDAPE------ 125 (294)
T ss_pred EEcCC-CCCCCCCCccccccccccCCHHHHHHHHHHHHHHh-------cCCCeEEEEeCHHHHHHHHHHHhChh------
Confidence 99987 999996433211 1134455667777666632 23589999999999999888875433
Q ss_pred CCeeeeceeEecCCcc
Q 018994 200 KPLINLQGYILGNPRT 215 (348)
Q Consensus 200 ~~~inlkGi~igng~~ 215 (348)
.++++++.|+..
T Consensus 126 ----~v~~lili~~~~ 137 (294)
T PLN02824 126 ----LVRGVMLINISL 137 (294)
T ss_pred ----heeEEEEECCCc
Confidence 288999888754
No 13
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=98.26 E-value=5.1e-06 Score=76.56 Aligned_cols=123 Identities=20% Similarity=0.119 Sum_probs=78.2
Q ss_pred EEEeCCCCCeeEEEEEEecCCCCCCCCeEEEecCCCCcccccccchhcCceEEccCCCCCCCCeeeccCCCCCCCCceEE
Q 018994 45 YVGVGESEEAQLFYYFVKSDKNPKEDPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEASILF 124 (348)
Q Consensus 45 yl~v~~~~~~~lfy~f~es~~~p~~~PlvlwlnGGPG~SS~~g~~~e~GP~~~~~~~~~g~~~~l~~n~~sW~~~anllf 124 (348)
|++++ +.+++|- + ..+.+.|+||+++|.+|.+..+..+. +.| .+..+++.
T Consensus 10 ~~~~~---~~~~~~~--~--~g~~~~~~vv~~hG~~~~~~~~~~~~----------------~~l-------~~~~~vi~ 59 (278)
T TIGR03056 10 RVTVG---PFHWHVQ--D--MGPTAGPLLLLLHGTGASTHSWRDLM----------------PPL-------ARSFRVVA 59 (278)
T ss_pred eeeEC---CEEEEEE--e--cCCCCCCeEEEEcCCCCCHHHHHHHH----------------HHH-------hhCcEEEe
Confidence 45554 3555543 2 23445689999999988766543221 012 12368999
Q ss_pred EeCCCcccccccccCCCCCcCchhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhcccccCCeee
Q 018994 125 VDSPVGTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLIN 204 (348)
Q Consensus 125 iD~PvG~GfSy~~~~~~~~~~d~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~in 204 (348)
+|.| |.|.|...... ..+-...++++.++++. +...+++|+|+|+||..+..+|.+.. -.
T Consensus 60 ~D~~-G~G~S~~~~~~--~~~~~~~~~~l~~~i~~-------~~~~~~~lvG~S~Gg~~a~~~a~~~p----------~~ 119 (278)
T TIGR03056 60 PDLP-GHGFTRAPFRF--RFTLPSMAEDLSALCAA-------EGLSPDGVIGHSAGAAIALRLALDGP----------VT 119 (278)
T ss_pred ecCC-CCCCCCCcccc--CCCHHHHHHHHHHHHHH-------cCCCCceEEEECccHHHHHHHHHhCC----------cc
Confidence 9976 99988643321 22445667777766653 22348899999999988777776421 23
Q ss_pred eceeEecCCccCc
Q 018994 205 LQGYILGNPRTDM 217 (348)
Q Consensus 205 lkGi~igng~~d~ 217 (348)
++++++.++..++
T Consensus 120 v~~~v~~~~~~~~ 132 (278)
T TIGR03056 120 PRMVVGINAALMP 132 (278)
T ss_pred cceEEEEcCcccc
Confidence 7888888886654
No 14
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=98.26 E-value=6.4e-06 Score=78.64 Aligned_cols=125 Identities=22% Similarity=0.347 Sum_probs=76.2
Q ss_pred EEEEEeCCCCCeeEEEEEEecCCCCCCCCeEEEecCCCCcccccccchhcCceEEccCCCCCCCCeeeccCCCC-CCCCc
Q 018994 43 TGYVGVGESEEAQLFYYFVKSDKNPKEDPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSW-TKEAS 121 (348)
Q Consensus 43 sGyl~v~~~~~~~lfy~f~es~~~p~~~PlvlwlnGGPG~SS~~g~~~e~GP~~~~~~~~~g~~~~l~~n~~sW-~~~an 121 (348)
.+|+.+.+ +.+++|+-. +.+. .|.||+++|+||.++..... ..| .+..+
T Consensus 6 ~~~~~~~~--~~~l~y~~~---g~~~-~~~lvllHG~~~~~~~~~~~------------------------~~~~~~~~~ 55 (306)
T TIGR01249 6 SGYLNVSD--NHQLYYEQS---GNPD-GKPVVFLHGGPGSGTDPGCR------------------------RFFDPETYR 55 (306)
T ss_pred CCeEEcCC--CcEEEEEEC---cCCC-CCEEEEECCCCCCCCCHHHH------------------------hccCccCCE
Confidence 57888865 577887531 2233 34568899999976431000 011 13478
Q ss_pred eEEEeCCCcccccccccCCCCCcCchhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhcccccCC
Q 018994 122 ILFVDSPVGTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKP 201 (348)
Q Consensus 122 llfiD~PvG~GfSy~~~~~~~~~~d~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~ 201 (348)
|+.+|.| |.|.|..... .+..+..+.++++..+++ . +...+++++|+|+||..+-.++.+-.+
T Consensus 56 vi~~D~~-G~G~S~~~~~-~~~~~~~~~~~dl~~l~~----~---l~~~~~~lvG~S~GG~ia~~~a~~~p~-------- 118 (306)
T TIGR01249 56 IVLFDQR-GCGKSTPHAC-LEENTTWDLVADIEKLRE----K---LGIKNWLVFGGSWGSTLALAYAQTHPE-------- 118 (306)
T ss_pred EEEECCC-CCCCCCCCCC-cccCCHHHHHHHHHHHHH----H---cCCCCEEEEEECHHHHHHHHHHHHChH--------
Confidence 9999977 9999964321 112233344555544443 2 223479999999999888777765332
Q ss_pred eeeeceeEecCCccC
Q 018994 202 LINLQGYILGNPRTD 216 (348)
Q Consensus 202 ~inlkGi~igng~~d 216 (348)
.++++++.+..+.
T Consensus 119 --~v~~lvl~~~~~~ 131 (306)
T TIGR01249 119 --VVTGLVLRGIFLL 131 (306)
T ss_pred --hhhhheeeccccC
Confidence 2677777766553
No 15
>PHA02857 monoglyceride lipase; Provisional
Probab=98.17 E-value=8.7e-06 Score=75.93 Aligned_cols=124 Identities=13% Similarity=0.046 Sum_probs=79.6
Q ss_pred CeeEEEEEEecCCCCCCCCeEEEecCCCCcccccccchhcCceEEccCCCCCCCCeeeccCCCCCC-CCceEEEeCCCcc
Q 018994 53 EAQLFYYFVKSDKNPKEDPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTK-EASILFVDSPVGT 131 (348)
Q Consensus 53 ~~~lfy~f~es~~~p~~~PlvlwlnGGPG~SS~~g~~~e~GP~~~~~~~~~g~~~~l~~n~~sW~~-~anllfiD~PvG~ 131 (348)
|.+|+|.+++.. +..+|+||.++|..++|..+-.+. ..|.+ -..++-+|.| |.
T Consensus 10 g~~l~~~~~~~~--~~~~~~v~llHG~~~~~~~~~~~~-----------------------~~l~~~g~~via~D~~-G~ 63 (276)
T PHA02857 10 NDYIYCKYWKPI--TYPKALVFISHGAGEHSGRYEELA-----------------------ENISSLGILVFSHDHI-GH 63 (276)
T ss_pred CCEEEEEeccCC--CCCCEEEEEeCCCccccchHHHHH-----------------------HHHHhCCCEEEEccCC-CC
Confidence 678999777664 344699999999977666543322 11222 2578999976 99
Q ss_pred cccccccCCCCCcCchhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhcccccCCeeeeceeEec
Q 018994 132 GFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILG 211 (348)
Q Consensus 132 GfSy~~~~~~~~~~d~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inlkGi~ig 211 (348)
|.|-.... . ..+-....+|+.+++...-+. +...+++|+|+|.||..+..+|.+ .+ -.++|+++.
T Consensus 64 G~S~~~~~-~-~~~~~~~~~d~~~~l~~~~~~---~~~~~~~lvG~S~GG~ia~~~a~~---~p-------~~i~~lil~ 128 (276)
T PHA02857 64 GRSNGEKM-M-IDDFGVYVRDVVQHVVTIKST---YPGVPVFLLGHSMGATISILAAYK---NP-------NLFTAMILM 128 (276)
T ss_pred CCCCCccC-C-cCCHHHHHHHHHHHHHHHHhh---CCCCCEEEEEcCchHHHHHHHHHh---Cc-------cccceEEEe
Confidence 99853211 1 112233456666666543333 334689999999999877666643 11 148999999
Q ss_pred CCccCc
Q 018994 212 NPRTDM 217 (348)
Q Consensus 212 ng~~d~ 217 (348)
+|.+.+
T Consensus 129 ~p~~~~ 134 (276)
T PHA02857 129 SPLVNA 134 (276)
T ss_pred cccccc
Confidence 997764
No 16
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=98.10 E-value=2e-05 Score=75.87 Aligned_cols=139 Identities=14% Similarity=0.079 Sum_probs=84.6
Q ss_pred eeEEEEEEeCCCCCeeEEEEEEecCCCCCCCCeEEEecCCCCcccccccchhcCceEEccCCCCCCCCeeeccCCCCCC-
Q 018994 40 ELETGYVGVGESEEAQLFYYFVKSDKNPKEDPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTK- 118 (348)
Q Consensus 40 ~~~sGyl~v~~~~~~~lfy~f~es~~~p~~~PlvlwlnGGPG~SS~~g~~~e~GP~~~~~~~~~g~~~~l~~n~~sW~~- 118 (348)
+...+++...+ |..++|+..........+|+|++++|..+.+ .+ .+.+ + ...|.+
T Consensus 31 ~~~~~~~~~~d--g~~l~~~~~~~~~~~~~~~~VvllHG~~~~~-~~-~~~~-----------------~---~~~L~~~ 86 (330)
T PLN02298 31 KGSKSFFTSPR--GLSLFTRSWLPSSSSPPRALIFMVHGYGNDI-SW-TFQS-----------------T---AIFLAQM 86 (330)
T ss_pred ccccceEEcCC--CCEEEEEEEecCCCCCCceEEEEEcCCCCCc-ce-ehhH-----------------H---HHHHHhC
Confidence 34566776643 6788885443222223568999999984332 21 0100 0 011333
Q ss_pred CCceEEEeCCCcccccccccCCCCCcCchhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhcccc
Q 018994 119 EASILFVDSPVGTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEED 198 (348)
Q Consensus 119 ~anllfiD~PvG~GfSy~~~~~~~~~~d~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~ 198 (348)
-.+|+.+|.| |.|.|-.. ..+..+-+..++|+..+++.. ....++...+++|+|+|.||..+-.++.+ ..
T Consensus 87 Gy~V~~~D~r-GhG~S~~~--~~~~~~~~~~~~D~~~~i~~l-~~~~~~~~~~i~l~GhSmGG~ia~~~a~~---~p--- 156 (330)
T PLN02298 87 GFACFALDLE-GHGRSEGL--RAYVPNVDLVVEDCLSFFNSV-KQREEFQGLPRFLYGESMGGAICLLIHLA---NP--- 156 (330)
T ss_pred CCEEEEecCC-CCCCCCCc--cccCCCHHHHHHHHHHHHHHH-HhcccCCCCCEEEEEecchhHHHHHHHhc---Cc---
Confidence 3789999987 99998532 122234456678888887643 33333444589999999999877655542 11
Q ss_pred cCCeeeeceeEecCCccC
Q 018994 199 IKPLINLQGYILGNPRTD 216 (348)
Q Consensus 199 ~~~~inlkGi~igng~~d 216 (348)
-.++|+++.+|+.+
T Consensus 157 ----~~v~~lvl~~~~~~ 170 (330)
T PLN02298 157 ----EGFDGAVLVAPMCK 170 (330)
T ss_pred ----ccceeEEEeccccc
Confidence 13899999888764
No 17
>PRK10673 acyl-CoA esterase; Provisional
Probab=98.07 E-value=1e-05 Score=74.08 Aligned_cols=104 Identities=17% Similarity=0.153 Sum_probs=73.0
Q ss_pred CCCCCCCeEEEecCCCCcccccccchhcCceEEccCCCCCCCCeeeccCCCCCCCCceEEEeCCCcccccccccCCCCCc
Q 018994 65 KNPKEDPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEASILFVDSPVGTGFSYARTPHASQT 144 (348)
Q Consensus 65 ~~p~~~PlvlwlnGGPG~SS~~g~~~e~GP~~~~~~~~~g~~~~l~~n~~sW~~~anllfiD~PvG~GfSy~~~~~~~~~ 144 (348)
..+.+.|.||+++|.+|.+..+..+.+ .+.+..+++.+|.| |.|.|.... . .
T Consensus 11 ~~~~~~~~iv~lhG~~~~~~~~~~~~~-----------------------~l~~~~~vi~~D~~-G~G~s~~~~--~--~ 62 (255)
T PRK10673 11 QNPHNNSPIVLVHGLFGSLDNLGVLAR-----------------------DLVNDHDIIQVDMR-NHGLSPRDP--V--M 62 (255)
T ss_pred CCCCCCCCEEEECCCCCchhHHHHHHH-----------------------HHhhCCeEEEECCC-CCCCCCCCC--C--C
Confidence 456678999999999888766533320 12234699999987 999886422 2 2
Q ss_pred CchhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhcccccCCeeeeceeEecCC
Q 018994 145 GDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNP 213 (348)
Q Consensus 145 ~d~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inlkGi~igng 213 (348)
+..+.++|+.++|..+ ...+++|+|+|.||..+..+|.+..+ .++++++.++
T Consensus 63 ~~~~~~~d~~~~l~~l-------~~~~~~lvGhS~Gg~va~~~a~~~~~----------~v~~lvli~~ 114 (255)
T PRK10673 63 NYPAMAQDLLDTLDAL-------QIEKATFIGHSMGGKAVMALTALAPD----------RIDKLVAIDI 114 (255)
T ss_pred CHHHHHHHHHHHHHHc-------CCCceEEEEECHHHHHHHHHHHhCHh----------hcceEEEEec
Confidence 4456778888888642 33479999999999999988875333 2788887653
No 18
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=98.00 E-value=4.6e-05 Score=74.18 Aligned_cols=127 Identities=17% Similarity=0.171 Sum_probs=79.6
Q ss_pred CCeeEEEEEEecCCCCCCCCeEEEecCCCCccccc-ccchhcCceEEccCCCCCCCCeeeccCCCCCC-CCceEEEeCCC
Q 018994 52 EEAQLFYYFVKSDKNPKEDPLLLWLTGGPGCSAFS-GLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTK-EASILFVDSPV 129 (348)
Q Consensus 52 ~~~~lfy~f~es~~~p~~~PlvlwlnGGPG~SS~~-g~~~e~GP~~~~~~~~~g~~~~l~~n~~sW~~-~anllfiD~Pv 129 (348)
.|..+||....... ...+|+||+++|..+.++.+ -.+. ..+.+ -.+++-+|.|
T Consensus 70 ~g~~l~~~~~~p~~-~~~~~~iv~lHG~~~~~~~~~~~~~-----------------------~~l~~~g~~v~~~D~~- 124 (349)
T PLN02385 70 RGVEIFSKSWLPEN-SRPKAAVCFCHGYGDTCTFFFEGIA-----------------------RKIASSGYGVFAMDYP- 124 (349)
T ss_pred CCCEEEEEEEecCC-CCCCeEEEEECCCCCccchHHHHHH-----------------------HHHHhCCCEEEEecCC-
Confidence 36788885544322 23569999999976554431 1111 01222 3678999987
Q ss_pred cccccccccCCCCCcCchhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhcccccCCeeeeceeE
Q 018994 130 GTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYI 209 (348)
Q Consensus 130 G~GfSy~~~~~~~~~~d~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inlkGi~ 209 (348)
|.|.|-... .+..+-+..++|+.++++. +...+++...+++|+|+|+||..+-.+|.+- . -.++|++
T Consensus 125 G~G~S~~~~--~~~~~~~~~~~dv~~~l~~-l~~~~~~~~~~~~LvGhSmGG~val~~a~~~---p-------~~v~glV 191 (349)
T PLN02385 125 GFGLSEGLH--GYIPSFDDLVDDVIEHYSK-IKGNPEFRGLPSFLFGQSMGGAVALKVHLKQ---P-------NAWDGAI 191 (349)
T ss_pred CCCCCCCCC--CCcCCHHHHHHHHHHHHHH-HHhccccCCCCEEEEEeccchHHHHHHHHhC---c-------chhhhee
Confidence 999885422 2223445567777777754 3444455556899999999998877665532 1 1378999
Q ss_pred ecCCccC
Q 018994 210 LGNPRTD 216 (348)
Q Consensus 210 igng~~d 216 (348)
+.+|...
T Consensus 192 Li~p~~~ 198 (349)
T PLN02385 192 LVAPMCK 198 (349)
T ss_pred Eeccccc
Confidence 8888653
No 19
>PRK06489 hypothetical protein; Provisional
Probab=97.99 E-value=5.6e-05 Score=73.99 Aligned_cols=142 Identities=15% Similarity=0.105 Sum_probs=74.4
Q ss_pred CceeEEEEEEeCCCCCeeEEEEEEecC---CCCCCCCeEEEecCCCCcccccccchhcCceEEccCCCCCCCCeee-ccC
Q 018994 38 PFELETGYVGVGESEEAQLFYYFVKSD---KNPKEDPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLR-LNP 113 (348)
Q Consensus 38 ~~~~~sGyl~v~~~~~~~lfy~f~es~---~~p~~~PlvlwlnGGPG~SS~~g~~~e~GP~~~~~~~~~g~~~~l~-~n~ 113 (348)
++...+|. .++ +.+++|.-.-.. .++++.|.|+.++|++|.+..+- .|.... .+. ...
T Consensus 38 ~~~~~~~~-~~~---g~~i~y~~~G~~~~~~~~~~gpplvllHG~~~~~~~~~-----~~~~~~---------~l~~~~~ 99 (360)
T PRK06489 38 DFTFHSGE-TLP---ELRLHYTTLGTPHRNADGEIDNAVLVLHGTGGSGKSFL-----SPTFAG---------ELFGPGQ 99 (360)
T ss_pred ceeccCCC-CcC---CceEEEEecCCCCcccccCCCCeEEEeCCCCCchhhhc-----cchhHH---------HhcCCCC
Confidence 44555664 222 466777632110 01223688999999988765431 000000 000 000
Q ss_pred CCCCCCCceEEEeCCCcccccccccCCC---C-CcCchhhHHHHHHHHHHHHhhCCCCCCCCe-EEEeecccCccHHHHH
Q 018994 114 YSWTKEASILFVDSPVGTGFSYARTPHA---S-QTGDFKQVHHLDQFLRKWLMDHPEFISNPF-YVGGDSYSGITVPALV 188 (348)
Q Consensus 114 ~sW~~~anllfiD~PvG~GfSy~~~~~~---~-~~~d~~~a~~~~~fL~~f~~~~p~~~~~~~-yi~GESYgG~yvp~la 188 (348)
.--.+..+|+.+|.| |.|.|-...... . ..+-++.++++..++. . ++.-.++ +|+|+|+||..+-.+|
T Consensus 100 ~l~~~~~~Via~Dl~-GhG~S~~p~~~~~~~~~~~~~~~~a~~~~~~l~----~--~lgi~~~~~lvG~SmGG~vAl~~A 172 (360)
T PRK06489 100 PLDASKYFIILPDGI-GHGKSSKPSDGLRAAFPRYDYDDMVEAQYRLVT----E--GLGVKHLRLILGTSMGGMHAWMWG 172 (360)
T ss_pred cccccCCEEEEeCCC-CCCCCCCCCcCCCCCCCcccHHHHHHHHHHHHH----H--hcCCCceeEEEEECHHHHHHHHHH
Confidence 011245789999987 999985322110 0 1133344444444332 2 1222355 4899999998888887
Q ss_pred HHHHhhcccccCCeeeeceeEecCCc
Q 018994 189 QRISNENEEDIKPLINLQGYILGNPR 214 (348)
Q Consensus 189 ~~i~~~~~~~~~~~inlkGi~igng~ 214 (348)
.+-.+. ++++++.++.
T Consensus 173 ~~~P~~----------V~~LVLi~s~ 188 (360)
T PRK06489 173 EKYPDF----------MDALMPMASQ 188 (360)
T ss_pred HhCchh----------hheeeeeccC
Confidence 653332 7777776653
No 20
>PLN02578 hydrolase
Probab=97.99 E-value=4.1e-05 Score=74.82 Aligned_cols=112 Identities=17% Similarity=0.212 Sum_probs=71.5
Q ss_pred CeeEEEEEEecCCCCCCCCeEEEecCCCCcccccccchhcCceEEccCCCCCCCCeeeccCCCCCCCCceEEEeCCCccc
Q 018994 53 EAQLFYYFVKSDKNPKEDPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEASILFVDSPVGTG 132 (348)
Q Consensus 53 ~~~lfy~f~es~~~p~~~PlvlwlnGGPG~SS~~g~~~e~GP~~~~~~~~~g~~~~l~~n~~sW~~~anllfiD~PvG~G 132 (348)
+.+++|.-.. +.|-||.++|-++.+..+.... +.| .+..+++.+|.| |.|
T Consensus 75 ~~~i~Y~~~g------~g~~vvliHG~~~~~~~w~~~~----------------~~l-------~~~~~v~~~D~~-G~G 124 (354)
T PLN02578 75 GHKIHYVVQG------EGLPIVLIHGFGASAFHWRYNI----------------PEL-------AKKYKVYALDLL-GFG 124 (354)
T ss_pred CEEEEEEEcC------CCCeEEEECCCCCCHHHHHHHH----------------HHH-------hcCCEEEEECCC-CCC
Confidence 4677775321 2355788998766544432221 112 235789999987 999
Q ss_pred ccccccCCCCCcCchhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhcccccCCeeeeceeEecC
Q 018994 133 FSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGN 212 (348)
Q Consensus 133 fSy~~~~~~~~~~d~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inlkGi~ign 212 (348)
.|-... .. .+....++++.+|++.. ...+++|+|+|+||..+..+|.+-.+ .++++++.|
T Consensus 125 ~S~~~~-~~--~~~~~~a~~l~~~i~~~-------~~~~~~lvG~S~Gg~ia~~~A~~~p~----------~v~~lvLv~ 184 (354)
T PLN02578 125 WSDKAL-IE--YDAMVWRDQVADFVKEV-------VKEPAVLVGNSLGGFTALSTAVGYPE----------LVAGVALLN 184 (354)
T ss_pred CCCCcc-cc--cCHHHHHHHHHHHHHHh-------ccCCeEEEEECHHHHHHHHHHHhChH----------hcceEEEEC
Confidence 884322 12 23444566777777643 23589999999999988888875433 388898887
Q ss_pred Cc
Q 018994 213 PR 214 (348)
Q Consensus 213 g~ 214 (348)
+.
T Consensus 185 ~~ 186 (354)
T PLN02578 185 SA 186 (354)
T ss_pred CC
Confidence 64
No 21
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=97.98 E-value=1.3e-05 Score=70.01 Aligned_cols=104 Identities=21% Similarity=0.250 Sum_probs=70.1
Q ss_pred EEEecCCCCcccccccchhcCceEEccCCCCCCCCeeeccCCCCCCCCceEEEeCCCcccccccccCCCCCcCchhhHHH
Q 018994 73 LLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEASILFVDSPVGTGFSYARTPHASQTGDFKQVHH 152 (348)
Q Consensus 73 vlwlnGGPG~SS~~g~~~e~GP~~~~~~~~~g~~~~l~~n~~sW~~~anllfiD~PvG~GfSy~~~~~~~~~~d~~~a~~ 152 (348)
||+++|.++.+..+..+.+ .| .+-.+++.+|.| |.|.|-.... ....+-.+.+++
T Consensus 1 vv~~hG~~~~~~~~~~~~~----------------~l-------~~~~~v~~~d~~-G~G~s~~~~~-~~~~~~~~~~~~ 55 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDPLAE----------------AL-------ARGYRVIAFDLP-GHGRSDPPPD-YSPYSIEDYAED 55 (228)
T ss_dssp EEEE-STTTTGGGGHHHHH----------------HH-------HTTSEEEEEECT-TSTTSSSHSS-GSGGSHHHHHHH
T ss_pred eEEECCCCCCHHHHHHHHH----------------HH-------hCCCEEEEEecC-Cccccccccc-cCCcchhhhhhh
Confidence 6899999988866544331 12 145679999987 9999865432 011233445566
Q ss_pred HHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhcccccCCeeeeceeEecCCccCcc
Q 018994 153 LDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTDMV 218 (348)
Q Consensus 153 ~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inlkGi~igng~~d~~ 218 (348)
+.++|+ .... .+++|+|+|+||..+-.++.+..+ .++|+++.+|.....
T Consensus 56 l~~~l~----~~~~---~~~~lvG~S~Gg~~a~~~a~~~p~----------~v~~~vl~~~~~~~~ 104 (228)
T PF12697_consen 56 LAELLD----ALGI---KKVILVGHSMGGMIALRLAARYPD----------RVKGLVLLSPPPPLP 104 (228)
T ss_dssp HHHHHH----HTTT---SSEEEEEETHHHHHHHHHHHHSGG----------GEEEEEEESESSSHH
T ss_pred hhhccc----cccc---cccccccccccccccccccccccc----------ccccceeeccccccc
Confidence 666554 3322 589999999999999888875332 399999999888643
No 22
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=97.96 E-value=3.6e-05 Score=71.96 Aligned_cols=117 Identities=15% Similarity=0.078 Sum_probs=74.6
Q ss_pred CeeEEEEEEecCCCCCCCCeEEEecCCCCcccccccchhcCceEEccCCCCCCCCeeeccCCCCCCCCceEEEeCCCccc
Q 018994 53 EAQLFYYFVKSDKNPKEDPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEASILFVDSPVGTG 132 (348)
Q Consensus 53 ~~~lfy~f~es~~~p~~~PlvlwlnGGPG~SS~~g~~~e~GP~~~~~~~~~g~~~~l~~n~~sW~~~anllfiD~PvG~G 132 (348)
+..+.|+..+. + ...|.|++++|-++.+..+..+.+ .| .+..+++.+|.| |.|
T Consensus 11 ~~~~~~~~~~~--~-~~~~plvllHG~~~~~~~w~~~~~----------------~L-------~~~~~vi~~Dl~-G~G 63 (276)
T TIGR02240 11 GQSIRTAVRPG--K-EGLTPLLIFNGIGANLELVFPFIE----------------AL-------DPDLEVIAFDVP-GVG 63 (276)
T ss_pred CcEEEEEEecC--C-CCCCcEEEEeCCCcchHHHHHHHH----------------Hh-------ccCceEEEECCC-CCC
Confidence 46788876432 2 234678899987666655422220 12 234699999987 999
Q ss_pred ccccccCCCCCcCchhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhcccccCCeeeeceeEecC
Q 018994 133 FSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGN 212 (348)
Q Consensus 133 fSy~~~~~~~~~~d~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inlkGi~ign 212 (348)
.|-... . ..+-+..++++.++|.. +.-.+++|+|+|+||..+-.+|.+-.+ .++++++.|
T Consensus 64 ~S~~~~-~--~~~~~~~~~~~~~~i~~-------l~~~~~~LvG~S~GG~va~~~a~~~p~----------~v~~lvl~~ 123 (276)
T TIGR02240 64 GSSTPR-H--PYRFPGLAKLAARMLDY-------LDYGQVNAIGVSWGGALAQQFAHDYPE----------RCKKLILAA 123 (276)
T ss_pred CCCCCC-C--cCcHHHHHHHHHHHHHH-------hCcCceEEEEECHHHHHHHHHHHHCHH----------HhhheEEec
Confidence 994321 1 12334455666665553 223489999999999988888875332 288999988
Q ss_pred CccC
Q 018994 213 PRTD 216 (348)
Q Consensus 213 g~~d 216 (348)
+...
T Consensus 124 ~~~~ 127 (276)
T TIGR02240 124 TAAG 127 (276)
T ss_pred cCCc
Confidence 7653
No 23
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=97.96 E-value=3.3e-05 Score=75.89 Aligned_cols=133 Identities=26% Similarity=0.330 Sum_probs=82.2
Q ss_pred eEEEEEEec--CCCCCCCCeEEEecCCCCcccccccchhcCceEEccCCCCCCCCeeeccCCCCCCCCceEEEeCCCccc
Q 018994 55 QLFYYFVKS--DKNPKEDPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEASILFVDSPVGTG 132 (348)
Q Consensus 55 ~lfy~f~es--~~~p~~~PlvlwlnGGPG~SS~~g~~~e~GP~~~~~~~~~g~~~~l~~n~~sW~~~anllfiD~PvG~G 132 (348)
.-.||++++ +.+|++||++|+++|| |.+.+.=|+.+.. ..+=+...+...||.+|-..-.
T Consensus 105 ~~s~Wlvk~P~~~~pk~DpVlIYlHGG-------GY~l~~~p~qi~~----------L~~i~~~l~~~SILvLDYsLt~- 166 (374)
T PF10340_consen 105 SQSYWLVKAPNRFKPKSDPVLIYLHGG-------GYFLGTTPSQIEF----------LLNIYKLLPEVSILVLDYSLTS- 166 (374)
T ss_pred cceEEEEeCCcccCCCCCcEEEEEcCC-------eeEecCCHHHHHH----------HHHHHHHcCCCeEEEEeccccc-
Confidence 356899985 3468889999999999 6677666765431 1112222234489999943221
Q ss_pred ccccccCCCCCcCchhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhcccccCCeeeeceeEecC
Q 018994 133 FSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGN 212 (348)
Q Consensus 133 fSy~~~~~~~~~~d~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inlkGi~ign 212 (348)
|- .....|.+.. .++.+..+...+.. ...++.|+|+|-||+-+-.+..++.+.++. +-=|.+++.+
T Consensus 167 -~~-~~~~~yPtQL----~qlv~~Y~~Lv~~~---G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~-----~~Pk~~iLIS 232 (374)
T PF10340_consen 167 -SD-EHGHKYPTQL----RQLVATYDYLVESE---GNKNIILMGDSAGGNLALSFLQYLKKPNKL-----PYPKSAILIS 232 (374)
T ss_pred -cc-cCCCcCchHH----HHHHHHHHHHHhcc---CCCeEEEEecCccHHHHHHHHHHHhhcCCC-----CCCceeEEEC
Confidence 00 0111233222 22333333222221 235899999999999999999998775431 2237899999
Q ss_pred CccCccc
Q 018994 213 PRTDMVV 219 (348)
Q Consensus 213 g~~d~~~ 219 (348)
||+.+..
T Consensus 233 PWv~l~~ 239 (374)
T PF10340_consen 233 PWVNLVP 239 (374)
T ss_pred CCcCCcC
Confidence 9999874
No 24
>PRK03592 haloalkane dehalogenase; Provisional
Probab=97.93 E-value=4.8e-05 Score=71.75 Aligned_cols=120 Identities=17% Similarity=0.127 Sum_probs=79.1
Q ss_pred EEEeCCCCCeeEEEEEEecCCCCCCCCeEEEecCCCCcccccccchhcCceEEccCCCCCCCCeeeccCCCCCCCCceEE
Q 018994 45 YVGVGESEEAQLFYYFVKSDKNPKEDPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEASILF 124 (348)
Q Consensus 45 yl~v~~~~~~~lfy~f~es~~~p~~~PlvlwlnGGPG~SS~~g~~~e~GP~~~~~~~~~g~~~~l~~n~~sW~~~anllf 124 (348)
+++++ +.+++|.-. + +.|.||+++|.|+.+..+-.+. +.| .+...++-
T Consensus 11 ~~~~~---g~~i~y~~~---G---~g~~vvllHG~~~~~~~w~~~~----------------~~L-------~~~~~via 58 (295)
T PRK03592 11 RVEVL---GSRMAYIET---G---EGDPIVFLHGNPTSSYLWRNII----------------PHL-------AGLGRCLA 58 (295)
T ss_pred EEEEC---CEEEEEEEe---C---CCCEEEEECCCCCCHHHHHHHH----------------HHH-------hhCCEEEE
Confidence 45554 466777521 1 3478999999998887764332 112 22348999
Q ss_pred EeCCCcccccccccCCCCCcCchhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhcccccCCeee
Q 018994 125 VDSPVGTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLIN 204 (348)
Q Consensus 125 iD~PvG~GfSy~~~~~~~~~~d~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~in 204 (348)
+|.| |.|.|-.... .+ +....|+++..+++. +...+++|+|+|.||.++-.+|.+-.+ .
T Consensus 59 ~D~~-G~G~S~~~~~-~~--~~~~~a~dl~~ll~~-------l~~~~~~lvGhS~Gg~ia~~~a~~~p~----------~ 117 (295)
T PRK03592 59 PDLI-GMGASDKPDI-DY--TFADHARYLDAWFDA-------LGLDDVVLVGHDWGSALGFDWAARHPD----------R 117 (295)
T ss_pred EcCC-CCCCCCCCCC-CC--CHHHHHHHHHHHHHH-------hCCCCeEEEEECHHHHHHHHHHHhChh----------h
Confidence 9987 9999954321 22 444556666666653 233589999999999988888775433 2
Q ss_pred eceeEecCCccCc
Q 018994 205 LQGYILGNPRTDM 217 (348)
Q Consensus 205 lkGi~igng~~d~ 217 (348)
++++++.|+...+
T Consensus 118 v~~lil~~~~~~~ 130 (295)
T PRK03592 118 VRGIAFMEAIVRP 130 (295)
T ss_pred eeEEEEECCCCCC
Confidence 8899998875443
No 25
>PRK03204 haloalkane dehalogenase; Provisional
Probab=97.90 E-value=7.5e-05 Score=70.68 Aligned_cols=123 Identities=15% Similarity=0.199 Sum_probs=73.5
Q ss_pred eEEEEEEeCCCCCeeEEEEEEecCCCCCCCCeEEEecCCCCcccccccchhcCceEEccCCCCCCCCeeeccCCCCCCCC
Q 018994 41 LETGYVGVGESEEAQLFYYFVKSDKNPKEDPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEA 120 (348)
Q Consensus 41 ~~sGyl~v~~~~~~~lfy~f~es~~~p~~~PlvlwlnGGPG~SS~~g~~~e~GP~~~~~~~~~g~~~~l~~n~~sW~~~a 120 (348)
..+.+++++. ..++|.- .+ ..|.||+++|.|..+..+-.+. ..+.+..
T Consensus 14 ~~~~~~~~~~---~~i~y~~---~G---~~~~iv~lHG~~~~~~~~~~~~-----------------------~~l~~~~ 61 (286)
T PRK03204 14 FESRWFDSSR---GRIHYID---EG---TGPPILLCHGNPTWSFLYRDII-----------------------VALRDRF 61 (286)
T ss_pred ccceEEEcCC---cEEEEEE---CC---CCCEEEEECCCCccHHHHHHHH-----------------------HHHhCCc
Confidence 3466788753 5676542 12 2478899999985544432221 0122347
Q ss_pred ceEEEeCCCcccccccccCCCCCcCchhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhcccccC
Q 018994 121 SILFVDSPVGTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIK 200 (348)
Q Consensus 121 nllfiD~PvG~GfSy~~~~~~~~~~d~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~ 200 (348)
+++-+|.| |.|.|-... ....+....++++..+++ . +...+++|+|+|+||..+-.+|..-.
T Consensus 62 ~vi~~D~~-G~G~S~~~~--~~~~~~~~~~~~~~~~~~----~---~~~~~~~lvG~S~Gg~va~~~a~~~p-------- 123 (286)
T PRK03204 62 RCVAPDYL-GFGLSERPS--GFGYQIDEHARVIGEFVD----H---LGLDRYLSMGQDWGGPISMAVAVERA-------- 123 (286)
T ss_pred EEEEECCC-CCCCCCCCC--ccccCHHHHHHHHHHHHH----H---hCCCCEEEEEECccHHHHHHHHHhCh--------
Confidence 89999977 999884321 111233344455544443 3 23348999999999986655554211
Q ss_pred CeeeeceeEecCCcc
Q 018994 201 PLINLQGYILGNPRT 215 (348)
Q Consensus 201 ~~inlkGi~igng~~ 215 (348)
-.+++++++++..
T Consensus 124 --~~v~~lvl~~~~~ 136 (286)
T PRK03204 124 --DRVRGVVLGNTWF 136 (286)
T ss_pred --hheeEEEEECccc
Confidence 2388888887754
No 26
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=97.86 E-value=8.1e-05 Score=73.97 Aligned_cols=132 Identities=17% Similarity=0.199 Sum_probs=81.3
Q ss_pred CceeEEEEEEeCCCCCeeEEEEEEecCCCCCCCCeEEEecCCCCcccccccchhcCceEEccCCCCCCCCeeeccCCCCC
Q 018994 38 PFELETGYVGVGESEEAQLFYYFVKSDKNPKEDPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWT 117 (348)
Q Consensus 38 ~~~~~sGyl~v~~~~~~~lfy~f~es~~~p~~~PlvlwlnGGPG~SS~~g~~~e~GP~~~~~~~~~g~~~~l~~n~~sW~ 117 (348)
+.++-+++....+ +..+||. + ..+...|.||.++|.|+.+..+-.+. +.| .
T Consensus 101 ~~~~~~~~~~~~~--~~~~~y~--~--~G~~~~~~ivllHG~~~~~~~w~~~~----------------~~L-------~ 151 (383)
T PLN03084 101 GLKMGAQSQASSD--LFRWFCV--E--SGSNNNPPVLLIHGFPSQAYSYRKVL----------------PVL-------S 151 (383)
T ss_pred cccccceeEEcCC--ceEEEEE--e--cCCCCCCeEEEECCCCCCHHHHHHHH----------------HHH-------h
Confidence 3455566555332 4666655 2 23345689999999988776653332 012 2
Q ss_pred CCCceEEEeCCCcccccccccCC-CCCcCchhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhcc
Q 018994 118 KEASILFVDSPVGTGFSYARTPH-ASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENE 196 (348)
Q Consensus 118 ~~anllfiD~PvG~GfSy~~~~~-~~~~~d~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~ 196 (348)
+..+++-+|.| |.|+|...... ....+-+..++++..+++. +...+++|+|+|+||..+-.+|.+-.+
T Consensus 152 ~~~~Via~Dlp-G~G~S~~p~~~~~~~ys~~~~a~~l~~~i~~-------l~~~~~~LvG~s~GG~ia~~~a~~~P~--- 220 (383)
T PLN03084 152 KNYHAIAFDWL-GFGFSDKPQPGYGFNYTLDEYVSSLESLIDE-------LKSDKVSLVVQGYFSPPVVKYASAHPD--- 220 (383)
T ss_pred cCCEEEEECCC-CCCCCCCCcccccccCCHHHHHHHHHHHHHH-------hCCCCceEEEECHHHHHHHHHHHhChH---
Confidence 24689999987 99999643221 1112444566666666654 223489999999999655555543221
Q ss_pred cccCCeeeeceeEecCCccC
Q 018994 197 EDIKPLINLQGYILGNPRTD 216 (348)
Q Consensus 197 ~~~~~~inlkGi~igng~~d 216 (348)
.++++++.|+...
T Consensus 221 -------~v~~lILi~~~~~ 233 (383)
T PLN03084 221 -------KIKKLILLNPPLT 233 (383)
T ss_pred -------hhcEEEEECCCCc
Confidence 3889999987653
No 27
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=97.78 E-value=6.5e-05 Score=66.95 Aligned_cols=104 Identities=17% Similarity=0.177 Sum_probs=65.1
Q ss_pred CCCCCeEEEecCCCCcccccccchhcCceEEccCCCCCCCCeeeccCCCCCCCCceEEEeCCCcccccccccCCCCCcCc
Q 018994 67 PKEDPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEASILFVDSPVGTGFSYARTPHASQTGD 146 (348)
Q Consensus 67 p~~~PlvlwlnGGPG~SS~~g~~~e~GP~~~~~~~~~g~~~~l~~n~~sW~~~anllfiD~PvG~GfSy~~~~~~~~~~d 146 (348)
+..+|++|+++|-++.+..+..+.+ .+ .+..+++.+|.| |.|.|-... ...+.
T Consensus 10 ~~~~~~li~~hg~~~~~~~~~~~~~----------------~l-------~~~~~v~~~d~~-G~G~s~~~~---~~~~~ 62 (251)
T TIGR02427 10 ADGAPVLVFINSLGTDLRMWDPVLP----------------AL-------TPDFRVLRYDKR-GHGLSDAPE---GPYSI 62 (251)
T ss_pred CCCCCeEEEEcCcccchhhHHHHHH----------------Hh-------hcccEEEEecCC-CCCCCCCCC---CCCCH
Confidence 3367999999886544443322210 11 134689999987 999884321 12244
Q ss_pred hhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhcccccCCeeeeceeEecCCc
Q 018994 147 FKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPR 214 (348)
Q Consensus 147 ~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inlkGi~igng~ 214 (348)
++.++++.++++.+ ...+++|+|+|+||..+-.+|.+-.+ .++++++.++.
T Consensus 63 ~~~~~~~~~~i~~~-------~~~~v~liG~S~Gg~~a~~~a~~~p~----------~v~~li~~~~~ 113 (251)
T TIGR02427 63 EDLADDVLALLDHL-------GIERAVFCGLSLGGLIAQGLAARRPD----------RVRALVLSNTA 113 (251)
T ss_pred HHHHHHHHHHHHHh-------CCCceEEEEeCchHHHHHHHHHHCHH----------HhHHHhhccCc
Confidence 55667776666532 23479999999999988888775322 26666666543
No 28
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=97.76 E-value=6.8e-05 Score=68.09 Aligned_cols=101 Identities=24% Similarity=0.231 Sum_probs=67.9
Q ss_pred CCeEEEecCCCCcccccccchhcCceEEccCCCCCCCCeeeccCCCCCCCCceEEEeCCCcccccccccCCCCCcCchhh
Q 018994 70 DPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEASILFVDSPVGTGFSYARTPHASQTGDFKQ 149 (348)
Q Consensus 70 ~PlvlwlnGGPG~SS~~g~~~e~GP~~~~~~~~~g~~~~l~~n~~sW~~~anllfiD~PvG~GfSy~~~~~~~~~~d~~~ 149 (348)
.|.||+++|.+|++..+-.+. | .+ +..+++.+|.| |.|.|.... ..+-++.
T Consensus 2 ~p~vvllHG~~~~~~~w~~~~---~-------------~l--------~~~~vi~~D~~-G~G~S~~~~----~~~~~~~ 52 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDWQPVG---E-------------AL--------PDYPRLYIDLP-GHGGSAAIS----VDGFADV 52 (242)
T ss_pred CCEEEEECCCCCChHHHHHHH---H-------------Hc--------CCCCEEEecCC-CCCCCCCcc----ccCHHHH
Confidence 588999999999887664332 1 11 23789999976 999985322 1244455
Q ss_pred HHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhcccccCCeeeeceeEecCCcc
Q 018994 150 VHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRT 215 (348)
Q Consensus 150 a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inlkGi~igng~~ 215 (348)
|+++.++|.. +...+++++|+|+||..+-.+|.+..+. -++++++.++..
T Consensus 53 ~~~l~~~l~~-------~~~~~~~lvG~S~Gg~va~~~a~~~~~~---------~v~~lvl~~~~~ 102 (242)
T PRK11126 53 SRLLSQTLQS-------YNILPYWLVGYSLGGRIAMYYACQGLAG---------GLCGLIVEGGNP 102 (242)
T ss_pred HHHHHHHHHH-------cCCCCeEEEEECHHHHHHHHHHHhCCcc---------cccEEEEeCCCC
Confidence 6666666642 2345999999999998888888753211 177888876543
No 29
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=97.68 E-value=0.00022 Score=71.17 Aligned_cols=108 Identities=16% Similarity=0.194 Sum_probs=68.0
Q ss_pred CCCCeEEEecCCCCcccccccchhcCceEEccCCCCCCCCeeeccCCCCCCCCceEEEeCCCcccccccccCCCCC-cCc
Q 018994 68 KEDPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEASILFVDSPVGTGFSYARTPHASQ-TGD 146 (348)
Q Consensus 68 ~~~PlvlwlnGGPG~SS~~g~~~e~GP~~~~~~~~~g~~~~l~~n~~sW~~~anllfiD~PvG~GfSy~~~~~~~~-~~d 146 (348)
...|.||+++|.++.+..+.... ..+.+..+++-+|.| |.|.|-.. .+. .+.
T Consensus 103 ~~~p~vvllHG~~~~~~~~~~~~-----------------------~~L~~~~~vi~~D~r-G~G~S~~~---~~~~~~~ 155 (402)
T PLN02894 103 EDAPTLVMVHGYGASQGFFFRNF-----------------------DALASRFRVIAIDQL-GWGGSSRP---DFTCKST 155 (402)
T ss_pred CCCCEEEEECCCCcchhHHHHHH-----------------------HHHHhCCEEEEECCC-CCCCCCCC---CcccccH
Confidence 45699999999877655432111 012234689999986 99988422 121 122
Q ss_pred hhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhcccccCCeeeeceeEecCCcc
Q 018994 147 FKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRT 215 (348)
Q Consensus 147 ~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inlkGi~igng~~ 215 (348)
.++.+.+.+.+..|.+.. ...+++|+|+|+||..+-.+|.+-. -.++++++.++..
T Consensus 156 ~~~~~~~~~~i~~~~~~l---~~~~~~lvGhS~GG~la~~~a~~~p----------~~v~~lvl~~p~~ 211 (402)
T PLN02894 156 EETEAWFIDSFEEWRKAK---NLSNFILLGHSFGGYVAAKYALKHP----------EHVQHLILVGPAG 211 (402)
T ss_pred HHHHHHHHHHHHHHHHHc---CCCCeEEEEECHHHHHHHHHHHhCc----------hhhcEEEEECCcc
Confidence 333344556666666542 2348999999999987777766422 2378888887754
No 30
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=97.63 E-value=0.00015 Score=64.34 Aligned_cols=105 Identities=23% Similarity=0.249 Sum_probs=65.0
Q ss_pred CCeEEEecCCCCcccccccchhcCceEEccCCCCCCCCeeeccCCCCCCCCceEEEeCCCcccccccccCCCCCcCchhh
Q 018994 70 DPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEASILFVDSPVGTGFSYARTPHASQTGDFKQ 149 (348)
Q Consensus 70 ~PlvlwlnGGPG~SS~~g~~~e~GP~~~~~~~~~g~~~~l~~n~~sW~~~anllfiD~PvG~GfSy~~~~~~~~~~d~~~ 149 (348)
+|+||+++|.+|.+..+..+. ..|. +-.+++-+|.| |.|.|..... ....+.++.
T Consensus 1 ~~~vv~~hG~~~~~~~~~~~~----------------~~L~-------~~~~v~~~d~~-g~G~s~~~~~-~~~~~~~~~ 55 (251)
T TIGR03695 1 KPVLVFLHGFLGSGADWQALI----------------ELLG-------PHFRCLAIDLP-GHGSSQSPDE-IERYDFEEA 55 (251)
T ss_pred CCEEEEEcCCCCchhhHHHHH----------------HHhc-------ccCeEEEEcCC-CCCCCCCCCc-cChhhHHHH
Confidence 478999999888776543221 0121 23688999976 9998843211 111233344
Q ss_pred HHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhcccccCCeeeeceeEecCCcc
Q 018994 150 VHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRT 215 (348)
Q Consensus 150 a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inlkGi~igng~~ 215 (348)
++++ +..+.+.. ...+++|+|+|+||..+..+|.+..+ .++++++.++..
T Consensus 56 ~~~~---~~~~~~~~---~~~~~~l~G~S~Gg~ia~~~a~~~~~----------~v~~lil~~~~~ 105 (251)
T TIGR03695 56 AQDI---LATLLDQL---GIEPFFLVGYSMGGRIALYYALQYPE----------RVQGLILESGSP 105 (251)
T ss_pred HHHH---HHHHHHHc---CCCeEEEEEeccHHHHHHHHHHhCch----------heeeeEEecCCC
Confidence 4442 23333332 34589999999999998888885422 378888877654
No 31
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=97.62 E-value=0.00026 Score=70.65 Aligned_cols=128 Identities=20% Similarity=0.133 Sum_probs=81.2
Q ss_pred CeeEEEEEEecCCCCCCCCeEEEecCCCCcccccccchhcCceEEccCCCCCCCCeeeccCCCCCCCCceEEEeCCCccc
Q 018994 53 EAQLFYYFVKSDKNPKEDPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEASILFVDSPVGTG 132 (348)
Q Consensus 53 ~~~lfy~f~es~~~p~~~PlvlwlnGGPG~SS~~g~~~e~GP~~~~~~~~~g~~~~l~~n~~sW~~~anllfiD~PvG~G 132 (348)
+..+|++...... ...+|+||+++|..+.+..+-.+. + .+. .+-.+++-+|.| |.|
T Consensus 120 ~~~l~~~~~~p~~-~~~~~~Vl~lHG~~~~~~~~~~~a---~-------------~L~------~~Gy~V~~~D~r-GhG 175 (395)
T PLN02652 120 RNALFCRSWAPAA-GEMRGILIIIHGLNEHSGRYLHFA---K-------------QLT------SCGFGVYAMDWI-GHG 175 (395)
T ss_pred CCEEEEEEecCCC-CCCceEEEEECCchHHHHHHHHHH---H-------------HHH------HCCCEEEEeCCC-CCC
Confidence 4677776655432 334689999999877654432222 0 011 123578889976 999
Q ss_pred ccccccCCCCCcCchhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhcccccCCeeeeceeEecC
Q 018994 133 FSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGN 212 (348)
Q Consensus 133 fSy~~~~~~~~~~d~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inlkGi~ign 212 (348)
.|-.. ..+..+.+..++|+..+++..-..+|. .+++|+|+|+||..+..++. +.+. .-.++|+++.+
T Consensus 176 ~S~~~--~~~~~~~~~~~~Dl~~~l~~l~~~~~~---~~i~lvGhSmGG~ial~~a~----~p~~----~~~v~glVL~s 242 (395)
T PLN02652 176 GSDGL--HGYVPSLDYVVEDTEAFLEKIRSENPG---VPCFLFGHSTGGAVVLKAAS----YPSI----EDKLEGIVLTS 242 (395)
T ss_pred CCCCC--CCCCcCHHHHHHHHHHHHHHHHHhCCC---CCEEEEEECHHHHHHHHHHh----ccCc----ccccceEEEEC
Confidence 88543 223334556677887787766555553 38999999999987765443 1110 12488999999
Q ss_pred CccCc
Q 018994 213 PRTDM 217 (348)
Q Consensus 213 g~~d~ 217 (348)
|+++.
T Consensus 243 P~l~~ 247 (395)
T PLN02652 243 PALRV 247 (395)
T ss_pred ccccc
Confidence 98753
No 32
>PRK10749 lysophospholipase L2; Provisional
Probab=97.59 E-value=0.00034 Score=67.65 Aligned_cols=125 Identities=14% Similarity=0.076 Sum_probs=76.7
Q ss_pred CeeEEEEEEecCCCCCCCCeEEEecCCCCcccccccchhcCceEEccCCCCCCCCeeeccCCCCCCCCceEEEeCCCccc
Q 018994 53 EAQLFYYFVKSDKNPKEDPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEASILFVDSPVGTG 132 (348)
Q Consensus 53 ~~~lfy~f~es~~~p~~~PlvlwlnGGPG~SS~~g~~~e~GP~~~~~~~~~g~~~~l~~n~~sW~~~anllfiD~PvG~G 132 (348)
|.+++|+..... ..+|+||.++|-.+.+..+..+. +. +. .+-.+++-+|.| |.|
T Consensus 40 g~~l~~~~~~~~---~~~~~vll~HG~~~~~~~y~~~~---~~-------------l~------~~g~~v~~~D~~-G~G 93 (330)
T PRK10749 40 DIPIRFVRFRAP---HHDRVVVICPGRIESYVKYAELA---YD-------------LF------HLGYDVLIIDHR-GQG 93 (330)
T ss_pred CCEEEEEEccCC---CCCcEEEEECCccchHHHHHHHH---HH-------------HH------HCCCeEEEEcCC-CCC
Confidence 567888765432 45689999999755443332211 10 11 123578999976 999
Q ss_pred ccccccCC---CCCcCchhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhcccccCCeeeeceeE
Q 018994 133 FSYARTPH---ASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYI 209 (348)
Q Consensus 133 fSy~~~~~---~~~~~d~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inlkGi~ 209 (348)
.|-..... ....+-+..++++..+++.....+ ...+++++|+|.||..+-.+|.+ .. -.++|++
T Consensus 94 ~S~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~---~~~~~~l~GhSmGG~ia~~~a~~---~p-------~~v~~lv 160 (330)
T PRK10749 94 RSGRLLDDPHRGHVERFNDYVDDLAAFWQQEIQPG---PYRKRYALAHSMGGAILTLFLQR---HP-------GVFDAIA 160 (330)
T ss_pred CCCCCCCCCCcCccccHHHHHHHHHHHHHHHHhcC---CCCCeEEEEEcHHHHHHHHHHHh---CC-------CCcceEE
Confidence 98532111 111233456677777776544433 34589999999999877666653 21 1378999
Q ss_pred ecCCccC
Q 018994 210 LGNPRTD 216 (348)
Q Consensus 210 igng~~d 216 (348)
+.+|...
T Consensus 161 l~~p~~~ 167 (330)
T PRK10749 161 LCAPMFG 167 (330)
T ss_pred EECchhc
Confidence 9988754
No 33
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=97.58 E-value=0.00028 Score=65.54 Aligned_cols=76 Identities=18% Similarity=0.210 Sum_probs=49.5
Q ss_pred CCceEEEeCCCcccccccccCCCCCcCchhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhcccc
Q 018994 119 EASILFVDSPVGTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEED 198 (348)
Q Consensus 119 ~anllfiD~PvG~GfSy~~~~~~~~~~d~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~ 198 (348)
..+++-+|.| |.|.|-.... +.. .....++++.++++. +...+++++|+|+||..+-.+|.+-.+.
T Consensus 60 ~~~vi~~D~~-G~G~S~~~~~-~~~-~~~~~~~~l~~~l~~-------l~~~~~~lvG~S~Gg~ia~~~a~~~p~~---- 125 (282)
T TIGR03343 60 GYRVILKDSP-GFNKSDAVVM-DEQ-RGLVNARAVKGLMDA-------LDIEKAHLVGNSMGGATALNFALEYPDR---- 125 (282)
T ss_pred CCEEEEECCC-CCCCCCCCcC-ccc-ccchhHHHHHHHHHH-------cCCCCeeEEEECchHHHHHHHHHhChHh----
Confidence 4899999976 9999853211 111 111235555555542 2345899999999999999988754332
Q ss_pred cCCeeeeceeEecCCc
Q 018994 199 IKPLINLQGYILGNPR 214 (348)
Q Consensus 199 ~~~~inlkGi~igng~ 214 (348)
++++++.+|.
T Consensus 126 ------v~~lvl~~~~ 135 (282)
T TIGR03343 126 ------IGKLILMGPG 135 (282)
T ss_pred ------hceEEEECCC
Confidence 6677776653
No 34
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=97.57 E-value=0.00032 Score=68.05 Aligned_cols=113 Identities=16% Similarity=0.112 Sum_probs=70.3
Q ss_pred eeEEEEEEecCCCCCCCCeEEEecCCCCcccccccchhcCceEEccCCCCCCCCeeeccCCCCCCCCceEEEeCCCcccc
Q 018994 54 AQLFYYFVKSDKNPKEDPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEASILFVDSPVGTGF 133 (348)
Q Consensus 54 ~~lfy~f~es~~~p~~~PlvlwlnGGPG~SS~~g~~~e~GP~~~~~~~~~g~~~~l~~n~~sW~~~anllfiD~PvG~Gf 133 (348)
..++|+ ...+.+.|.||+++|.+|.+..+..+.+ .|. +..+++-+|.| |.|.
T Consensus 119 ~~i~~~----~~g~~~~~~vl~~HG~~~~~~~~~~~~~----------------~l~-------~~~~v~~~d~~-g~G~ 170 (371)
T PRK14875 119 RTVRYL----RLGEGDGTPVVLIHGFGGDLNNWLFNHA----------------ALA-------AGRPVIALDLP-GHGA 170 (371)
T ss_pred cEEEEe----cccCCCCCeEEEECCCCCccchHHHHHH----------------HHh-------cCCEEEEEcCC-CCCC
Confidence 456554 2223456889999998887766543331 121 12689999977 9998
Q ss_pred cccccCCCCCcCchhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhcccccCCeeeeceeEecCC
Q 018994 134 SYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNP 213 (348)
Q Consensus 134 Sy~~~~~~~~~~d~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inlkGi~igng 213 (348)
|-.... ..+..+.++++..+++ . +...+++|.|+|+||..+..+|.+-. -.++++++.+|
T Consensus 171 s~~~~~---~~~~~~~~~~~~~~~~----~---~~~~~~~lvG~S~Gg~~a~~~a~~~~----------~~v~~lv~~~~ 230 (371)
T PRK14875 171 SSKAVG---AGSLDELAAAVLAFLD----A---LGIERAHLVGHSMGGAVALRLAARAP----------QRVASLTLIAP 230 (371)
T ss_pred CCCCCC---CCCHHHHHHHHHHHHH----h---cCCccEEEEeechHHHHHHHHHHhCc----------hheeEEEEECc
Confidence 842211 1234444555555543 2 33358999999999999988887521 13677777665
Q ss_pred c
Q 018994 214 R 214 (348)
Q Consensus 214 ~ 214 (348)
.
T Consensus 231 ~ 231 (371)
T PRK14875 231 A 231 (371)
T ss_pred C
Confidence 4
No 35
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=97.54 E-value=0.00044 Score=67.81 Aligned_cols=105 Identities=15% Similarity=0.119 Sum_probs=66.2
Q ss_pred CCCeEEEecCCCCcccccccchhcCceEEccCCCCCCCCeeeccCCCCCCCCceEEEeCCCcccccccccCCCCCcCchh
Q 018994 69 EDPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEASILFVDSPVGTGFSYARTPHASQTGDFK 148 (348)
Q Consensus 69 ~~PlvlwlnGGPG~SS~~g~~~e~GP~~~~~~~~~g~~~~l~~n~~sW~~~anllfiD~PvG~GfSy~~~~~~~~~~d~~ 148 (348)
+.|.||.++|.++.+..+..+.+ ...+..+++.+|.| |.|.|-.... ...+-+.
T Consensus 87 ~gp~lvllHG~~~~~~~w~~~~~-----------------------~L~~~~~via~Dl~-G~G~S~~~~~--~~~~~~~ 140 (360)
T PLN02679 87 SGPPVLLVHGFGASIPHWRRNIG-----------------------VLAKNYTVYAIDLL-GFGASDKPPG--FSYTMET 140 (360)
T ss_pred CCCeEEEECCCCCCHHHHHHHHH-----------------------HHhcCCEEEEECCC-CCCCCCCCCC--ccccHHH
Confidence 34778899999888776533321 11224689999987 9999853221 1223445
Q ss_pred hHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhcccccCCeeeeceeEecCCcc
Q 018994 149 QVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRT 215 (348)
Q Consensus 149 ~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inlkGi~igng~~ 215 (348)
.++++.++|+. +...+++|+|+|+||..+-.+|..- ..+ .++|+++.|+..
T Consensus 141 ~a~~l~~~l~~-------l~~~~~~lvGhS~Gg~ia~~~a~~~--~P~-------rV~~LVLi~~~~ 191 (360)
T PLN02679 141 WAELILDFLEE-------VVQKPTVLIGNSVGSLACVIAASES--TRD-------LVRGLVLLNCAG 191 (360)
T ss_pred HHHHHHHHHHH-------hcCCCeEEEEECHHHHHHHHHHHhc--Chh-------hcCEEEEECCcc
Confidence 66667666653 2234899999999997655444321 111 288888888653
No 36
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=97.47 E-value=0.00053 Score=68.83 Aligned_cols=80 Identities=20% Similarity=0.132 Sum_probs=55.6
Q ss_pred CceEEEeCCCcccccccccCCCCCcCchhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhccccc
Q 018994 120 ASILFVDSPVGTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDI 199 (348)
Q Consensus 120 anllfiD~PvG~GfSy~~~~~~~~~~d~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~ 199 (348)
.++|-+|.| |.|.|-... . ..+ .......+.+|+...|.....++.|+|.|+||.+++.+|..-.+
T Consensus 223 y~vl~~D~p-G~G~s~~~~---~-~~d---~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~------ 288 (414)
T PRK05077 223 IAMLTIDMP-SVGFSSKWK---L-TQD---SSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPP------ 288 (414)
T ss_pred CEEEEECCC-CCCCCCCCC---c-ccc---HHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCc------
Confidence 678999998 999984321 1 111 12223455567777777777799999999999999988864211
Q ss_pred CCeeeeceeEecCCccCc
Q 018994 200 KPLINLQGYILGNPRTDM 217 (348)
Q Consensus 200 ~~~inlkGi~igng~~d~ 217 (348)
.++++++.+|.++.
T Consensus 289 ----ri~a~V~~~~~~~~ 302 (414)
T PRK05077 289 ----RLKAVACLGPVVHT 302 (414)
T ss_pred ----CceEEEEECCccch
Confidence 28888888887653
No 37
>PRK10349 carboxylesterase BioH; Provisional
Probab=97.43 E-value=0.00025 Score=65.29 Aligned_cols=95 Identities=15% Similarity=0.027 Sum_probs=62.4
Q ss_pred CeEEEecCCCCcccccccchhcCceEEccCCCCCCCCeeeccCCCCCCCCceEEEeCCCcccccccccCCCCCcCchhhH
Q 018994 71 PLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEASILFVDSPVGTGFSYARTPHASQTGDFKQV 150 (348)
Q Consensus 71 PlvlwlnGGPG~SS~~g~~~e~GP~~~~~~~~~g~~~~l~~n~~sW~~~anllfiD~PvG~GfSy~~~~~~~~~~d~~~a 150 (348)
|.||+++|.++++..+-.+. ..+.+..+++.+|.| |.|.|-..+ . .+.++.+
T Consensus 14 ~~ivllHG~~~~~~~w~~~~-----------------------~~L~~~~~vi~~Dl~-G~G~S~~~~--~--~~~~~~~ 65 (256)
T PRK10349 14 VHLVLLHGWGLNAEVWRCID-----------------------EELSSHFTLHLVDLP-GFGRSRGFG--A--LSLADMA 65 (256)
T ss_pred CeEEEECCCCCChhHHHHHH-----------------------HHHhcCCEEEEecCC-CCCCCCCCC--C--CCHHHHH
Confidence 56899999888877763322 122355899999987 999985321 1 2333334
Q ss_pred HHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhcccccCCeeeeceeEecCCc
Q 018994 151 HHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPR 214 (348)
Q Consensus 151 ~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inlkGi~igng~ 214 (348)
+++. . +...+++++|+|+||..+..+|.+-. -.++++++.|+.
T Consensus 66 ~~l~----~-------~~~~~~~lvGhS~Gg~ia~~~a~~~p----------~~v~~lili~~~ 108 (256)
T PRK10349 66 EAVL----Q-------QAPDKAIWLGWSLGGLVASQIALTHP----------ERVQALVTVASS 108 (256)
T ss_pred HHHH----h-------cCCCCeEEEEECHHHHHHHHHHHhCh----------HhhheEEEecCc
Confidence 4332 1 12348999999999998888876422 237888887763
No 38
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=97.40 E-value=0.00041 Score=73.15 Aligned_cols=132 Identities=18% Similarity=0.278 Sum_probs=81.9
Q ss_pred CeeEEEEEEecCC-CCC-CCCeEEEecCCCCcccccccchhcCceEEccCCCCCCCCeeeccCCC-CCCCCceEEEeCCC
Q 018994 53 EAQLFYYFVKSDK-NPK-EDPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYS-WTKEASILFVDSPV 129 (348)
Q Consensus 53 ~~~lfy~f~es~~-~p~-~~PlvlwlnGGPG~SS~~g~~~e~GP~~~~~~~~~g~~~~l~~n~~s-W~~~anllfiD~Pv 129 (348)
|..+..|++.... ++. +-|+|+|++||| +++.+. .+. .+... +.+-..|++++ |.
T Consensus 375 G~~i~~~l~~P~~~~~~k~yP~i~~~hGGP--~~~~~~-------~~~------------~~~q~~~~~G~~V~~~n-~R 432 (620)
T COG1506 375 GETIHGWLYKPPGFDPRKKYPLIVYIHGGP--SAQVGY-------SFN------------PEIQVLASAGYAVLAPN-YR 432 (620)
T ss_pred CCEEEEEEecCCCCCCCCCCCEEEEeCCCC--cccccc-------ccc------------hhhHHHhcCCeEEEEeC-CC
Confidence 6788889886543 332 249999999999 444331 111 11111 33456788888 66
Q ss_pred cc-cccccccCCCC-CcCchhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhcccccCCeeeece
Q 018994 130 GT-GFSYARTPHAS-QTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQG 207 (348)
Q Consensus 130 G~-GfSy~~~~~~~-~~~d~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inlkG 207 (348)
|. ||+..=..... .... ...+|+..++. |+.+.|.-...++.|+|.||||-..-.++. .. . -+|.
T Consensus 433 GS~GyG~~F~~~~~~~~g~-~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGymtl~~~~----~~------~-~f~a 499 (620)
T COG1506 433 GSTGYGREFADAIRGDWGG-VDLEDLIAAVD-ALVKLPLVDPERIGITGGSYGGYMTLLAAT----KT------P-RFKA 499 (620)
T ss_pred CCCccHHHHHHhhhhccCC-ccHHHHHHHHH-HHHhCCCcChHHeEEeccChHHHHHHHHHh----cC------c-hhhe
Confidence 64 44332111111 1122 34577888888 999999988889999999999965444433 22 1 3788
Q ss_pred eEecCCccCccc
Q 018994 208 YILGNPRTDMVV 219 (348)
Q Consensus 208 i~igng~~d~~~ 219 (348)
.+...|.++...
T Consensus 500 ~~~~~~~~~~~~ 511 (620)
T COG1506 500 AVAVAGGVDWLL 511 (620)
T ss_pred EEeccCcchhhh
Confidence 888888777654
No 39
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=97.39 E-value=0.001 Score=67.98 Aligned_cols=133 Identities=18% Similarity=0.192 Sum_probs=79.6
Q ss_pred eeEEEEEEeCCCCCeeEEEEEEecCCCCCCCCeEEEecCCCCccccccc-chhcCceEEccCCCCCCCCeeeccCCCCCC
Q 018994 40 ELETGYVGVGESEEAQLFYYFVKSDKNPKEDPLLLWLTGGPGCSAFSGL-AYEIGPVNFNTVEYNGSLPTLRLNPYSWTK 118 (348)
Q Consensus 40 ~~~sGyl~v~~~~~~~lfy~f~es~~~p~~~PlvlwlnGGPG~SS~~g~-~~e~GP~~~~~~~~~g~~~~l~~n~~sW~~ 118 (348)
+...-|+..+ +..+||+...... ....|.||+++|.+|.+..+.. +. +.+.. .+.+
T Consensus 175 ~~~~~~~~~~---~~~l~~~~~gp~~-~~~k~~VVLlHG~~~s~~~W~~~~~----------------~~L~~---~~~~ 231 (481)
T PLN03087 175 KFCTSWLSSS---NESLFVHVQQPKD-NKAKEDVLFIHGFISSSAFWTETLF----------------PNFSD---AAKS 231 (481)
T ss_pred ceeeeeEeeC---CeEEEEEEecCCC-CCCCCeEEEECCCCccHHHHHHHHH----------------HHHHH---HhhC
Confidence 3344667664 3678887644332 2234789999999988776532 11 00111 2344
Q ss_pred CCceEEEeCCCcccccccccCCCCCcCchhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhcccc
Q 018994 119 EASILFVDSPVGTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEED 198 (348)
Q Consensus 119 ~anllfiD~PvG~GfSy~~~~~~~~~~d~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~ 198 (348)
...++.+|.| |.|.|-......| +.++.++++. +.+++. +...+++|+|+|.||..+-.+|.+-.+
T Consensus 232 ~yrVia~Dl~-G~G~S~~p~~~~y--tl~~~a~~l~---~~ll~~---lg~~k~~LVGhSmGG~iAl~~A~~~Pe----- 297 (481)
T PLN03087 232 TYRLFAVDLL-GFGRSPKPADSLY--TLREHLEMIE---RSVLER---YKVKSFHIVAHSLGCILALALAVKHPG----- 297 (481)
T ss_pred CCEEEEECCC-CCCCCcCCCCCcC--CHHHHHHHHH---HHHHHH---cCCCCEEEEEECHHHHHHHHHHHhChH-----
Confidence 6789999987 8888843211112 3333344442 133333 234589999999999988888875332
Q ss_pred cCCeeeeceeEecCCc
Q 018994 199 IKPLINLQGYILGNPR 214 (348)
Q Consensus 199 ~~~~inlkGi~igng~ 214 (348)
.++++++.++.
T Consensus 298 -----~V~~LVLi~~~ 308 (481)
T PLN03087 298 -----AVKSLTLLAPP 308 (481)
T ss_pred -----hccEEEEECCC
Confidence 27788887753
No 40
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=97.32 E-value=0.00041 Score=61.60 Aligned_cols=97 Identities=14% Similarity=0.111 Sum_probs=59.3
Q ss_pred CCeEEEecCCCCcccccccchhcCceEEccCCCCCCCCeeeccCCCCCCCCceEEEeCCCcccccccccCCCCCcCchhh
Q 018994 70 DPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEASILFVDSPVGTGFSYARTPHASQTGDFKQ 149 (348)
Q Consensus 70 ~PlvlwlnGGPG~SS~~g~~~e~GP~~~~~~~~~g~~~~l~~n~~sW~~~anllfiD~PvG~GfSy~~~~~~~~~~d~~~ 149 (348)
.|.||+++|.++.+..+-.+.+ .+ .+..+++.+|.| |.|.|.... . .+..+.
T Consensus 4 ~~~iv~~HG~~~~~~~~~~~~~----------------~l-------~~~~~vi~~d~~-G~G~s~~~~--~--~~~~~~ 55 (245)
T TIGR01738 4 NVHLVLIHGWGMNAEVFRCLDE----------------EL-------SAHFTLHLVDLP-GHGRSRGFG--P--LSLADA 55 (245)
T ss_pred CceEEEEcCCCCchhhHHHHHH----------------hh-------ccCeEEEEecCC-cCccCCCCC--C--cCHHHH
Confidence 4789999998666555422220 11 124789999976 999874321 1 122233
Q ss_pred HHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhcccccCCeeeeceeEecCCcc
Q 018994 150 VHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRT 215 (348)
Q Consensus 150 a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inlkGi~igng~~ 215 (348)
++++ .... ..+++++|+|+||..+..+|.+-.+ .++++++.++..
T Consensus 56 ~~~~----~~~~-------~~~~~lvG~S~Gg~~a~~~a~~~p~----------~v~~~il~~~~~ 100 (245)
T TIGR01738 56 AEAI----AAQA-------PDPAIWLGWSLGGLVALHIAATHPD----------RVRALVTVASSP 100 (245)
T ss_pred HHHH----HHhC-------CCCeEEEEEcHHHHHHHHHHHHCHH----------hhheeeEecCCc
Confidence 3333 2211 2489999999999988887764332 277888776643
No 41
>PLN02965 Probable pheophorbidase
Probab=97.32 E-value=0.00056 Score=63.21 Aligned_cols=76 Identities=16% Similarity=0.153 Sum_probs=51.6
Q ss_pred CCceEEEeCCCcccccccccCCCCCcCchhhHHHHHHHHHHHHhhCCCCCC-CCeEEEeecccCccHHHHHHHHHhhccc
Q 018994 119 EASILFVDSPVGTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFIS-NPFYVGGDSYSGITVPALVQRISNENEE 197 (348)
Q Consensus 119 ~anllfiD~PvG~GfSy~~~~~~~~~~d~~~a~~~~~fL~~f~~~~p~~~~-~~~yi~GESYgG~yvp~la~~i~~~~~~ 197 (348)
...++-+|.| |.|.|-..... ..+.+..|+++.++|.. +.. ++++|+|+|+||..+..+|.+..+.
T Consensus 30 ~~~via~Dl~-G~G~S~~~~~~--~~~~~~~a~dl~~~l~~-------l~~~~~~~lvGhSmGG~ia~~~a~~~p~~--- 96 (255)
T PLN02965 30 GFKSTCVDLT-GAGISLTDSNT--VSSSDQYNRPLFALLSD-------LPPDHKVILVGHSIGGGSVTEALCKFTDK--- 96 (255)
T ss_pred CceEEEecCC-cCCCCCCCccc--cCCHHHHHHHHHHHHHh-------cCCCCCEEEEecCcchHHHHHHHHhCchh---
Confidence 3578999987 99998432211 22445566777766653 222 4899999999999888888754322
Q ss_pred ccCCeeeeceeEecCCc
Q 018994 198 DIKPLINLQGYILGNPR 214 (348)
Q Consensus 198 ~~~~~inlkGi~igng~ 214 (348)
++++++.++.
T Consensus 97 -------v~~lvl~~~~ 106 (255)
T PLN02965 97 -------ISMAIYVAAA 106 (255)
T ss_pred -------eeEEEEEccc
Confidence 6788877764
No 42
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=97.29 E-value=0.0014 Score=63.63 Aligned_cols=75 Identities=13% Similarity=0.072 Sum_probs=51.2
Q ss_pred CCCceEEEeCCCcccccccccCCCCCcCchhhHHHHHHHHHHHHhhCCCCCC-CCeEEEeecccCccHHHHHHHHHhhcc
Q 018994 118 KEASILFVDSPVGTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFIS-NPFYVGGDSYSGITVPALVQRISNENE 196 (348)
Q Consensus 118 ~~anllfiD~PvG~GfSy~~~~~~~~~~d~~~a~~~~~fL~~f~~~~p~~~~-~~~yi~GESYgG~yvp~la~~i~~~~~ 196 (348)
+...|+.+|.| |-|-|. ...+ +....|+++..+|+. +.- +.+.|+|+|+||..+-.+|.+-.++
T Consensus 98 ~~~~Vi~~Dl~-G~g~s~---~~~~--~~~~~a~dl~~ll~~-------l~l~~~~~lvG~SmGG~vA~~~A~~~P~~-- 162 (343)
T PRK08775 98 ARFRLLAFDFI-GADGSL---DVPI--DTADQADAIALLLDA-------LGIARLHAFVGYSYGALVGLQFASRHPAR-- 162 (343)
T ss_pred cccEEEEEeCC-CCCCCC---CCCC--CHHHHHHHHHHHHHH-------cCCCcceEEEEECHHHHHHHHHHHHChHh--
Confidence 46789999988 766552 1122 334557777777753 222 2457999999999888888764432
Q ss_pred cccCCeeeeceeEecCCcc
Q 018994 197 EDIKPLINLQGYILGNPRT 215 (348)
Q Consensus 197 ~~~~~~inlkGi~igng~~ 215 (348)
++++++.++..
T Consensus 163 --------V~~LvLi~s~~ 173 (343)
T PRK08775 163 --------VRTLVVVSGAH 173 (343)
T ss_pred --------hheEEEECccc
Confidence 88888887754
No 43
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=97.26 E-value=0.0047 Score=58.23 Aligned_cols=42 Identities=10% Similarity=0.038 Sum_probs=31.1
Q ss_pred CCCCCeEEEeecccCccHHHHHHHHHhhcccccCCeeeeceeEecCCccCcc
Q 018994 167 FISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTDMV 218 (348)
Q Consensus 167 ~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inlkGi~igng~~d~~ 218 (348)
....+++|+|+|+||..+-.++.+-.+ .+++++..+|+.++.
T Consensus 135 ~~~~~~~~~G~S~GG~~a~~~a~~~p~----------~~~~~~~~~~~~~~~ 176 (275)
T TIGR02821 135 LDGERQGITGHSMGGHGALVIALKNPD----------RFKSVSAFAPIVAPS 176 (275)
T ss_pred CCCCceEEEEEChhHHHHHHHHHhCcc----------cceEEEEECCccCcc
Confidence 445689999999999877777664221 278999889988764
No 44
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=97.25 E-value=0.0011 Score=62.62 Aligned_cols=106 Identities=16% Similarity=0.157 Sum_probs=65.3
Q ss_pred CCCCeEEEecCCCCcccccccchhcCceEEccCCCCCCCCeeeccCCCCCCCCceEEEeCCCcccccccccCCCCCcCch
Q 018994 68 KEDPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEASILFVDSPVGTGFSYARTPHASQTGDF 147 (348)
Q Consensus 68 ~~~PlvlwlnGGPG~SS~~g~~~e~GP~~~~~~~~~g~~~~l~~n~~sW~~~anllfiD~PvG~GfSy~~~~~~~~~~d~ 147 (348)
.++|.|++++|..+.++.+..+. ..|.. +-.+++-+|.| |.|.|...... ..+.+
T Consensus 16 ~~~p~vvliHG~~~~~~~w~~~~----------------~~L~~------~g~~vi~~dl~-g~G~s~~~~~~--~~~~~ 70 (273)
T PLN02211 16 RQPPHFVLIHGISGGSWCWYKIR----------------CLMEN------SGYKVTCIDLK-SAGIDQSDADS--VTTFD 70 (273)
T ss_pred CCCCeEEEECCCCCCcCcHHHHH----------------HHHHh------CCCEEEEeccc-CCCCCCCCccc--CCCHH
Confidence 56799999999877666543222 01211 12588999987 88877432211 12444
Q ss_pred hhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhcccccCCeeeeceeEecCCc
Q 018994 148 KQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPR 214 (348)
Q Consensus 148 ~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inlkGi~igng~ 214 (348)
..++++.++|+ .... ..+++|+|+||||..+-.++....+ .++++++.++.
T Consensus 71 ~~~~~l~~~i~----~l~~--~~~v~lvGhS~GG~v~~~~a~~~p~----------~v~~lv~~~~~ 121 (273)
T PLN02211 71 EYNKPLIDFLS----SLPE--NEKVILVGHSAGGLSVTQAIHRFPK----------KICLAVYVAAT 121 (273)
T ss_pred HHHHHHHHHHH----hcCC--CCCEEEEEECchHHHHHHHHHhChh----------heeEEEEeccc
Confidence 44555555554 3221 3599999999999987777764322 26677776554
No 45
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=97.16 E-value=0.0014 Score=63.44 Aligned_cols=87 Identities=14% Similarity=0.149 Sum_probs=62.4
Q ss_pred CCCCCCceEEEeCCCcccccccccCCCCCcCchhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhh
Q 018994 115 SWTKEASILFVDSPVGTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNE 194 (348)
Q Consensus 115 sW~~~anllfiD~PvG~GfSy~~~~~~~~~~d~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~ 194 (348)
+..+.-||-.||.| |-|.|-... +..+-+.+-+.+.+-+++|..+..- .+.+|+|||+||-....-|.+-.++
T Consensus 112 ~La~~~~vyaiDll-G~G~SSRP~---F~~d~~~~e~~fvesiE~WR~~~~L---~KmilvGHSfGGYLaa~YAlKyPer 184 (365)
T KOG4409|consen 112 DLAKIRNVYAIDLL-GFGRSSRPK---FSIDPTTAEKEFVESIEQWRKKMGL---EKMILVGHSFGGYLAAKYALKYPER 184 (365)
T ss_pred hhhhcCceEEeccc-CCCCCCCCC---CCCCcccchHHHHHHHHHHHHHcCC---cceeEeeccchHHHHHHHHHhChHh
Confidence 44457889999987 999985432 2223233335788999999987532 3899999999998777666655543
Q ss_pred cccccCCeeeeceeEecCCccCcc
Q 018994 195 NEEDIKPLINLQGYILGNPRTDMV 218 (348)
Q Consensus 195 ~~~~~~~~inlkGi~igng~~d~~ 218 (348)
++-+++.+||--+.
T Consensus 185 ----------V~kLiLvsP~Gf~~ 198 (365)
T KOG4409|consen 185 ----------VEKLILVSPWGFPE 198 (365)
T ss_pred ----------hceEEEeccccccc
Confidence 77888888886554
No 46
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=97.10 E-value=0.0015 Score=61.78 Aligned_cols=126 Identities=12% Similarity=0.077 Sum_probs=74.6
Q ss_pred eeEEEEEEecCCCCCCCCeEEEecCCCCccccc-ccchhcCceEEccCCCCCCCCeeeccCCCCC-CCCceEEEeCCCcc
Q 018994 54 AQLFYYFVKSDKNPKEDPLLLWLTGGPGCSAFS-GLAYEIGPVNFNTVEYNGSLPTLRLNPYSWT-KEASILFVDSPVGT 131 (348)
Q Consensus 54 ~~lfy~f~es~~~p~~~PlvlwlnGGPG~SS~~-g~~~e~GP~~~~~~~~~g~~~~l~~n~~sW~-~~anllfiD~PvG~ 131 (348)
.++|.|+++.... ..+|+||+++|-.+-..-+ -.+... -..+. .-.+++-+|.| |.
T Consensus 10 g~~~~~~~~p~~~-~~~~~VlllHG~g~~~~~~~~~~~~l--------------------a~~La~~Gy~Vl~~Dl~-G~ 67 (266)
T TIGR03101 10 GFRFCLYHPPVAV-GPRGVVIYLPPFAEEMNKSRRMVALQ--------------------ARAFAAGGFGVLQIDLY-GC 67 (266)
T ss_pred CcEEEEEecCCCC-CCceEEEEECCCcccccchhHHHHHH--------------------HHHHHHCCCEEEEECCC-CC
Confidence 5578877765432 3369999999853211000 000000 01121 23688999987 99
Q ss_pred cccccccCCCCCcCchhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhcccccCCeeeeceeEec
Q 018994 132 GFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILG 211 (348)
Q Consensus 132 GfSy~~~~~~~~~~d~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inlkGi~ig 211 (348)
|.|-.... . .+.....+|+..++ +|+++.. ..+++|+|+|.||..+..+|.+.. -.++++++-
T Consensus 68 G~S~g~~~-~--~~~~~~~~Dv~~ai-~~L~~~~---~~~v~LvG~SmGG~vAl~~A~~~p----------~~v~~lVL~ 130 (266)
T TIGR03101 68 GDSAGDFA-A--ARWDVWKEDVAAAY-RWLIEQG---HPPVTLWGLRLGALLALDAANPLA----------AKCNRLVLW 130 (266)
T ss_pred CCCCCccc-c--CCHHHHHHHHHHHH-HHHHhcC---CCCEEEEEECHHHHHHHHHHHhCc----------cccceEEEe
Confidence 98854321 1 12233445555443 3555432 358999999999999887775421 237889999
Q ss_pred CCccCcc
Q 018994 212 NPRTDMV 218 (348)
Q Consensus 212 ng~~d~~ 218 (348)
+|.++-.
T Consensus 131 ~P~~~g~ 137 (266)
T TIGR03101 131 QPVVSGK 137 (266)
T ss_pred ccccchH
Confidence 9988754
No 47
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=97.07 E-value=0.0026 Score=74.00 Aligned_cols=108 Identities=16% Similarity=0.156 Sum_probs=69.4
Q ss_pred CCCCCCeEEEecCCCCcccccccchhcCceEEccCCCCCCCCeeeccCCCCCCCCceEEEeCCCcccccccccC-----C
Q 018994 66 NPKEDPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEASILFVDSPVGTGFSYARTP-----H 140 (348)
Q Consensus 66 ~p~~~PlvlwlnGGPG~SS~~g~~~e~GP~~~~~~~~~g~~~~l~~n~~sW~~~anllfiD~PvG~GfSy~~~~-----~ 140 (348)
+.++.|.||+++|.+|.+..+..+.+ .| .+..+++.+|.| |.|.|..... .
T Consensus 1367 ~~~~~~~vVllHG~~~s~~~w~~~~~----------------~L-------~~~~rVi~~Dl~-G~G~S~~~~~~~~~~~ 1422 (1655)
T PLN02980 1367 QNAEGSVVLFLHGFLGTGEDWIPIMK----------------AI-------SGSARCISIDLP-GHGGSKIQNHAKETQT 1422 (1655)
T ss_pred CCCCCCeEEEECCCCCCHHHHHHHHH----------------HH-------hCCCEEEEEcCC-CCCCCCCccccccccc
Confidence 34456899999999998876533220 12 123689999987 9998854321 0
Q ss_pred CCCcCchhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhcccccCCeeeeceeEecCCc
Q 018994 141 ASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPR 214 (348)
Q Consensus 141 ~~~~~d~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inlkGi~igng~ 214 (348)
....+.+..|+++..+++. +...+++|+|+|+||..+-.+|.+..+ .++++++.++.
T Consensus 1423 ~~~~si~~~a~~l~~ll~~-------l~~~~v~LvGhSmGG~iAl~~A~~~P~----------~V~~lVlis~~ 1479 (1655)
T PLN02980 1423 EPTLSVELVADLLYKLIEH-------ITPGKVTLVGYSMGARIALYMALRFSD----------KIEGAVIISGS 1479 (1655)
T ss_pred cccCCHHHHHHHHHHHHHH-------hCCCCEEEEEECHHHHHHHHHHHhChH----------hhCEEEEECCC
Confidence 1112344556666555542 233589999999999988888765332 27777776653
No 48
>PRK05855 short chain dehydrogenase; Validated
Probab=96.94 E-value=0.0026 Score=65.42 Aligned_cols=100 Identities=13% Similarity=0.092 Sum_probs=64.3
Q ss_pred CeeEEEEEEecCCCCCCCCeEEEecCCCCcccccccchhcCceEEccCCCCCCCCeeeccCCCCCCCCceEEEeCCCccc
Q 018994 53 EAQLFYYFVKSDKNPKEDPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEASILFVDSPVGTG 132 (348)
Q Consensus 53 ~~~lfy~f~es~~~p~~~PlvlwlnGGPG~SS~~g~~~e~GP~~~~~~~~~g~~~~l~~n~~sW~~~anllfiD~PvG~G 132 (348)
+..+.|+-. .+.+.|.||+++|.++.+..+..+.+ .| .+..+++.+|.| |.|
T Consensus 12 g~~l~~~~~----g~~~~~~ivllHG~~~~~~~w~~~~~----------------~L-------~~~~~Vi~~D~~-G~G 63 (582)
T PRK05855 12 GVRLAVYEW----GDPDRPTVVLVHGYPDNHEVWDGVAP----------------LL-------ADRFRVVAYDVR-GAG 63 (582)
T ss_pred CEEEEEEEc----CCCCCCeEEEEcCCCchHHHHHHHHH----------------Hh-------hcceEEEEecCC-CCC
Confidence 567877643 22347899999999877665432220 12 223689999987 999
Q ss_pred ccccccCCCCCcCchhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHH
Q 018994 133 FSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPAL 187 (348)
Q Consensus 133 fSy~~~~~~~~~~d~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~l 187 (348)
.|...... ...+.+..++|+..+++.. . ...+++|+|+|+||..+-.+
T Consensus 64 ~S~~~~~~-~~~~~~~~a~dl~~~i~~l---~---~~~~~~lvGhS~Gg~~a~~~ 111 (582)
T PRK05855 64 RSSAPKRT-AAYTLARLADDFAAVIDAV---S---PDRPVHLLAHDWGSIQGWEA 111 (582)
T ss_pred CCCCCCcc-cccCHHHHHHHHHHHHHHh---C---CCCcEEEEecChHHHHHHHH
Confidence 99643221 1234556778888888742 1 12379999999999554333
No 49
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=96.91 E-value=0.0053 Score=53.65 Aligned_cols=104 Identities=22% Similarity=0.245 Sum_probs=63.0
Q ss_pred CCeEEEecCCCCcccccccchhcCceEEccCCCCCCCCeeeccCCCCCCCCceEEEeCCCcccccccccCCCCCcCchhh
Q 018994 70 DPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEASILFVDSPVGTGFSYARTPHASQTGDFKQ 149 (348)
Q Consensus 70 ~PlvlwlnGGPG~SS~~g~~~e~GP~~~~~~~~~g~~~~l~~n~~sW~~~anllfiD~PvG~GfSy~~~~~~~~~~d~~~ 149 (348)
.|.+++++|+|+++..+....+. +...... .+++.+|+| |.|.|- .. .+ .....
T Consensus 21 ~~~i~~~hg~~~~~~~~~~~~~~----------------~~~~~~~----~~~~~~d~~-g~g~s~-~~--~~--~~~~~ 74 (282)
T COG0596 21 GPPLVLLHGFPGSSSVWRPVFKV----------------LPALAAR----YRVIAPDLR-GHGRSD-PA--GY--SLSAY 74 (282)
T ss_pred CCeEEEeCCCCCchhhhHHHHHH----------------hhccccc----eEEEEeccc-CCCCCC-cc--cc--cHHHH
Confidence 67999999999988776431100 1111111 899999999 999996 11 01 11111
Q ss_pred HHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhcccccCCeeeeceeEecCCccC
Q 018994 150 VHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTD 216 (348)
Q Consensus 150 a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inlkGi~igng~~d 216 (348)
++++..++ +. +...++++.|+|+||..+-.++.+..+ .++++++.++...
T Consensus 75 ~~~~~~~~----~~---~~~~~~~l~G~S~Gg~~~~~~~~~~p~----------~~~~~v~~~~~~~ 124 (282)
T COG0596 75 ADDLAALL----DA---LGLEKVVLVGHSMGGAVALALALRHPD----------RVRGLVLIGPAPP 124 (282)
T ss_pred HHHHHHHH----HH---hCCCceEEEEecccHHHHHHHHHhcch----------hhheeeEecCCCC
Confidence 44444444 32 222349999999998777766665443 3677777766554
No 50
>PRK10566 esterase; Provisional
Probab=96.90 E-value=0.0036 Score=57.26 Aligned_cols=97 Identities=12% Similarity=0.238 Sum_probs=56.8
Q ss_pred CCCCeEEEecCCCCcccccccchhcCceEEccCCCCCCCCeeeccCCCCCC-CCceEEEeCCCcccccccccCCCCCcC-
Q 018994 68 KEDPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTK-EASILFVDSPVGTGFSYARTPHASQTG- 145 (348)
Q Consensus 68 ~~~PlvlwlnGGPG~SS~~g~~~e~GP~~~~~~~~~g~~~~l~~n~~sW~~-~anllfiD~PvG~GfSy~~~~~~~~~~- 145 (348)
...|+||+++|++|....+..+. ..|.+ -.+++.+|.| |.|-|+..... ....
T Consensus 25 ~~~p~vv~~HG~~~~~~~~~~~~-----------------------~~l~~~G~~v~~~d~~-g~G~~~~~~~~-~~~~~ 79 (249)
T PRK10566 25 TPLPTVFFYHGFTSSKLVYSYFA-----------------------VALAQAGFRVIMPDAP-MHGARFSGDEA-RRLNH 79 (249)
T ss_pred CCCCEEEEeCCCCcccchHHHHH-----------------------HHHHhCCCEEEEecCC-cccccCCCccc-cchhh
Confidence 45799999999987654322111 11222 2568888966 77766432111 1101
Q ss_pred ---c-hhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHH
Q 018994 146 ---D-FKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQR 190 (348)
Q Consensus 146 ---d-~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~ 190 (348)
+ ....+++..++ .|+.+.+....++++|+|+|+||..+-.++.+
T Consensus 80 ~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~ 127 (249)
T PRK10566 80 FWQILLQNMQEFPTLR-AAIREEGWLLDDRLAVGGASMGGMTALGIMAR 127 (249)
T ss_pred HHHHHHHHHHHHHHHH-HHHHhcCCcCccceeEEeecccHHHHHHHHHh
Confidence 1 12334444433 45555554556689999999999988877653
No 51
>PLN02442 S-formylglutathione hydrolase
Probab=96.89 E-value=0.0071 Score=57.40 Aligned_cols=56 Identities=13% Similarity=0.125 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhcccccCCeeeeceeEecCCccCcc
Q 018994 150 VHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTDMV 218 (348)
Q Consensus 150 a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inlkGi~igng~~d~~ 218 (348)
.+++...+..++.. ....+++|+|.|+||+-+-.++.+-.+ .+++++..+|..++.
T Consensus 126 ~~~l~~~i~~~~~~---~~~~~~~i~G~S~GG~~a~~~a~~~p~----------~~~~~~~~~~~~~~~ 181 (283)
T PLN02442 126 VKELPKLLSDNFDQ---LDTSRASIFGHSMGGHGALTIYLKNPD----------KYKSVSAFAPIANPI 181 (283)
T ss_pred HHHHHHHHHHHHHh---cCCCceEEEEEChhHHHHHHHHHhCch----------hEEEEEEECCccCcc
Confidence 34455555555543 344579999999999866666653211 278899999988754
No 52
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=96.84 E-value=0.0064 Score=58.39 Aligned_cols=139 Identities=19% Similarity=0.223 Sum_probs=88.8
Q ss_pred ceeEEEEEEeCCCCCeeEEEEEEecCCCCCCCCeEEEecCCCCcccccccchhcCceEEccCCCCCCCCeeeccCCCCCC
Q 018994 39 FELETGYVGVGESEEAQLFYYFVKSDKNPKEDPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTK 118 (348)
Q Consensus 39 ~~~~sGyl~v~~~~~~~lfy~f~es~~~p~~~PlvlwlnGGPG~SS~~g~~~e~GP~~~~~~~~~g~~~~l~~n~~sW~~ 118 (348)
.....|+....+ +..++|+.++...++. .+|++++|.=..+.-+-.+. . .+..+
T Consensus 7 ~~~~~~~~~~~d--~~~~~~~~~~~~~~~~--g~Vvl~HG~~Eh~~ry~~la---~-------------~l~~~------ 60 (298)
T COG2267 7 RTRTEGYFTGAD--GTRLRYRTWAAPEPPK--GVVVLVHGLGEHSGRYEELA---D-------------DLAAR------ 60 (298)
T ss_pred cccccceeecCC--CceEEEEeecCCCCCC--cEEEEecCchHHHHHHHHHH---H-------------HHHhC------
Confidence 344455555443 6889998887765444 89999999855554432221 0 01112
Q ss_pred CCceEEEeCCCcccccccccCCCCCcCchhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhcccc
Q 018994 119 EASILFVDSPVGTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEED 198 (348)
Q Consensus 119 ~anllfiD~PvG~GfSy~~~~~~~~~~d~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~ 198 (348)
=..++=+|.| |-|-|.. .......+-.+...|+..|++.--..+| ..|+||+|+|-||-.+...+..-.
T Consensus 61 G~~V~~~D~R-GhG~S~r-~~rg~~~~f~~~~~dl~~~~~~~~~~~~---~~p~~l~gHSmGg~Ia~~~~~~~~------ 129 (298)
T COG2267 61 GFDVYALDLR-GHGRSPR-GQRGHVDSFADYVDDLDAFVETIAEPDP---GLPVFLLGHSMGGLIALLYLARYP------ 129 (298)
T ss_pred CCEEEEecCC-CCCCCCC-CCcCCchhHHHHHHHHHHHHHHHhccCC---CCCeEEEEeCcHHHHHHHHHHhCC------
Confidence 2457779987 9999962 1222223334445566666665444434 359999999999988777666433
Q ss_pred cCCeeeeceeEecCCccCcc
Q 018994 199 IKPLINLQGYILGNPRTDMV 218 (348)
Q Consensus 199 ~~~~inlkGi~igng~~d~~ 218 (348)
-.++|+++-+|++...
T Consensus 130 ----~~i~~~vLssP~~~l~ 145 (298)
T COG2267 130 ----PRIDGLVLSSPALGLG 145 (298)
T ss_pred ----ccccEEEEECccccCC
Confidence 3499999999999876
No 53
>PRK07581 hypothetical protein; Validated
Probab=96.82 E-value=0.0078 Score=58.09 Aligned_cols=129 Identities=16% Similarity=0.099 Sum_probs=70.0
Q ss_pred CeeEEEEEEecCCCCCCCCeEEEecCCCCcccccccchhcCceEEccCCCCCCCCeeeccCCCCCCCCceEEEeCCCccc
Q 018994 53 EAQLFYYFVKSDKNPKEDPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEASILFVDSPVGTG 132 (348)
Q Consensus 53 ~~~lfy~f~es~~~p~~~PlvlwlnGGPG~SS~~g~~~e~GP~~~~~~~~~g~~~~l~~n~~sW~~~anllfiD~PvG~G 132 (348)
+.+++|.-... ..+...|+||+++|++|.+..+......|| .+. .+...+|-+|.| |.|
T Consensus 25 ~~~l~y~~~G~-~~~~~~~~vll~~~~~~~~~~~~~~~~~~~-------------~l~------~~~~~vi~~D~~-G~G 83 (339)
T PRK07581 25 DARLAYKTYGT-LNAAKDNAILYPTWYSGTHQDNEWLIGPGR-------------ALD------PEKYFIIIPNMF-GNG 83 (339)
T ss_pred CceEEEEecCc-cCCCCCCEEEEeCCCCCCcccchhhccCCC-------------ccC------cCceEEEEecCC-CCC
Confidence 46777754321 123456888887666555444221111111 111 235789999987 999
Q ss_pred ccccccCC--CCCcC---chhhHHHHHHHHHHHHhhCCCCCCCC-eEEEeecccCccHHHHHHHHHhhcccccCCeeeec
Q 018994 133 FSYARTPH--ASQTG---DFKQVHHLDQFLRKWLMDHPEFISNP-FYVGGDSYSGITVPALVQRISNENEEDIKPLINLQ 206 (348)
Q Consensus 133 fSy~~~~~--~~~~~---d~~~a~~~~~fL~~f~~~~p~~~~~~-~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inlk 206 (348)
.|-..... .+... ....++++.... .++.. ++.-.+ .+|+|.|+||..+-.+|.+-.+. ++
T Consensus 84 ~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~--~lgi~~~~~lvG~S~GG~va~~~a~~~P~~----------V~ 150 (339)
T PRK07581 84 LSSSPSNTPAPFNAARFPHVTIYDNVRAQH-RLLTE--KFGIERLALVVGWSMGAQQTYHWAVRYPDM----------VE 150 (339)
T ss_pred CCCCCCCCCCCCCCCCCCceeHHHHHHHHH-HHHHH--HhCCCceEEEEEeCHHHHHHHHHHHHCHHH----------Hh
Confidence 98533211 12111 112344444322 22221 123346 57899999999999999876554 67
Q ss_pred eeEecCCcc
Q 018994 207 GYILGNPRT 215 (348)
Q Consensus 207 Gi~igng~~ 215 (348)
++++.++..
T Consensus 151 ~Lvli~~~~ 159 (339)
T PRK07581 151 RAAPIAGTA 159 (339)
T ss_pred hheeeecCC
Confidence 777765543
No 54
>PLN02511 hydrolase
Probab=96.75 E-value=0.014 Score=58.06 Aligned_cols=118 Identities=17% Similarity=0.152 Sum_probs=70.0
Q ss_pred EEEEEEeCCCCCeeEEE-EEEe-cCCCCCCCCeEEEecCCCCcccc-c-ccchhcCceEEccCCCCCCCCeeeccCCCCC
Q 018994 42 ETGYVGVGESEEAQLFY-YFVK-SDKNPKEDPLLLWLTGGPGCSAF-S-GLAYEIGPVNFNTVEYNGSLPTLRLNPYSWT 117 (348)
Q Consensus 42 ~sGyl~v~~~~~~~lfy-~f~e-s~~~p~~~PlvlwlnGGPG~SS~-~-g~~~e~GP~~~~~~~~~g~~~~l~~n~~sW~ 117 (348)
..-++...+ |..+.+ |+.. ....+.++|+||.++|..|+|.. + ..+. .....
T Consensus 72 ~re~l~~~D--G~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~----------------------~~~~~ 127 (388)
T PLN02511 72 RRECLRTPD--GGAVALDWVSGDDRALPADAPVLILLPGLTGGSDDSYVRHML----------------------LRARS 127 (388)
T ss_pred eEEEEECCC--CCEEEEEecCcccccCCCCCCEEEEECCCCCCCCCHHHHHHH----------------------HHHHH
Confidence 344566544 455555 4432 12235678999999999998642 1 1111 00012
Q ss_pred CCCceEEEeCCCcccccccccCCCCCcCchhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHH
Q 018994 118 KEASILFVDSPVGTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQR 190 (348)
Q Consensus 118 ~~anllfiD~PvG~GfSy~~~~~~~~~~d~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~ 190 (348)
+-.+++-+|.+ |.|-|-......+. ...++|+.++++..-.++| ..+++++|+|.||..+-..+.+
T Consensus 128 ~g~~vv~~d~r-G~G~s~~~~~~~~~---~~~~~Dl~~~i~~l~~~~~---~~~~~lvG~SlGg~i~~~yl~~ 193 (388)
T PLN02511 128 KGWRVVVFNSR-GCADSPVTTPQFYS---ASFTGDLRQVVDHVAGRYP---SANLYAAGWSLGANILVNYLGE 193 (388)
T ss_pred CCCEEEEEecC-CCCCCCCCCcCEEc---CCchHHHHHHHHHHHHHCC---CCCEEEEEechhHHHHHHHHHh
Confidence 34578899976 88888543222121 2345567666665555555 3589999999999887665543
No 55
>PRK10985 putative hydrolase; Provisional
Probab=96.71 E-value=0.017 Score=55.77 Aligned_cols=134 Identities=12% Similarity=0.082 Sum_probs=65.4
Q ss_pred EEEEeCCCCCeeEEEEEEecCCCCCCCCeEEEecCCCCcccc-ccc-chhcCceEEccCCCCCCCCeeeccCCCCCCCCc
Q 018994 44 GYVGVGESEEAQLFYYFVKSDKNPKEDPLLLWLTGGPGCSAF-SGL-AYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEAS 121 (348)
Q Consensus 44 Gyl~v~~~~~~~lfy~f~es~~~p~~~PlvlwlnGGPG~SS~-~g~-~~e~GP~~~~~~~~~g~~~~l~~n~~sW~~~an 121 (348)
-.+...+ |..+.+++.+....+..+|+||.++|.+|++.. +.. +. . .+... -.+
T Consensus 34 ~~~~~~d--g~~~~l~w~~~~~~~~~~p~vll~HG~~g~~~~~~~~~~~---~-------------~l~~~------G~~ 89 (324)
T PRK10985 34 QRLELPD--GDFVDLAWSEDPAQARHKPRLVLFHGLEGSFNSPYAHGLL---E-------------AAQKR------GWL 89 (324)
T ss_pred eEEECCC--CCEEEEecCCCCccCCCCCEEEEeCCCCCCCcCHHHHHHH---H-------------HHHHC------CCE
Confidence 3355544 444544433332334568999999999987543 110 11 0 01111 124
Q ss_pred eEEEeCCCcccccccccCCCCCcCchhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhcccccCC
Q 018994 122 ILFVDSPVGTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKP 201 (348)
Q Consensus 122 llfiD~PvG~GfSy~~~~~~~~~~d~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~ 201 (348)
++-+|.+ |.|-|-......+.... .+|+..+++.--++++ ..+++++|+|.||..+-..+.+-.+
T Consensus 90 v~~~d~r-G~g~~~~~~~~~~~~~~---~~D~~~~i~~l~~~~~---~~~~~~vG~S~GG~i~~~~~~~~~~-------- 154 (324)
T PRK10985 90 GVVMHFR-GCSGEPNRLHRIYHSGE---TEDARFFLRWLQREFG---HVPTAAVGYSLGGNMLACLLAKEGD-------- 154 (324)
T ss_pred EEEEeCC-CCCCCccCCcceECCCc---hHHHHHHHHHHHHhCC---CCCEEEEEecchHHHHHHHHHhhCC--------
Confidence 5556754 65533211111121122 2344443332222343 3589999999999876555543221
Q ss_pred eeeeceeEecCCccC
Q 018994 202 LINLQGYILGNPRTD 216 (348)
Q Consensus 202 ~inlkGi~igng~~d 216 (348)
...++++++.++..+
T Consensus 155 ~~~~~~~v~i~~p~~ 169 (324)
T PRK10985 155 DLPLDAAVIVSAPLM 169 (324)
T ss_pred CCCccEEEEEcCCCC
Confidence 123666555555444
No 56
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=96.69 E-value=0.035 Score=52.93 Aligned_cols=114 Identities=18% Similarity=0.173 Sum_probs=61.6
Q ss_pred CeeEEEEEEecCCCCCCCCeEEEecCCCCcccccccch------hcCceEEc-cCCCCCCCCeeeccCCCCCCCCceEEE
Q 018994 53 EAQLFYYFVKSDKNPKEDPLLLWLTGGPGCSAFSGLAY------EIGPVNFN-TVEYNGSLPTLRLNPYSWTKEASILFV 125 (348)
Q Consensus 53 ~~~lfy~f~es~~~p~~~PlvlwlnGGPG~SS~~g~~~------e~GP~~~~-~~~~~g~~~~l~~n~~sW~~~anllfi 125 (348)
+...-||++....-++..||||-|+|+=|.....-++. |-=+|.|- +++ -+-.||
T Consensus 44 g~~r~y~l~vP~g~~~~apLvv~LHG~~~sgag~~~~sg~d~lAd~~gFlV~yPdg----------~~~~wn-------- 105 (312)
T COG3509 44 GLKRSYRLYVPPGLPSGAPLVVVLHGSGGSGAGQLHGTGWDALADREGFLVAYPDG----------YDRAWN-------- 105 (312)
T ss_pred CCccceEEEcCCCCCCCCCEEEEEecCCCChHHhhcccchhhhhcccCcEEECcCc----------cccccC--------
Confidence 46677888877777888899999999877654322111 11112211 111 123343
Q ss_pred eCCCcccccccccCCCCCcCchhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHH
Q 018994 126 DSPVGTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQR 190 (348)
Q Consensus 126 D~PvG~GfSy~~~~~~~~~~d~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~ 190 (348)
|-+.|-++..... ..+...+..+.+.+..-..+| .-....+||+|-|-||..+-.|+..
T Consensus 106 --~~~~~~~~~p~~~---~~g~ddVgflr~lva~l~~~~-gidp~RVyvtGlS~GG~Ma~~lac~ 164 (312)
T COG3509 106 --ANGCGNWFGPADR---RRGVDDVGFLRALVAKLVNEY-GIDPARVYVTGLSNGGRMANRLACE 164 (312)
T ss_pred --CCcccccCCcccc---cCCccHHHHHHHHHHHHHHhc-CcCcceEEEEeeCcHHHHHHHHHhc
Confidence 3355545432210 112222233434443333343 2234489999999999988777764
No 57
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=96.66 E-value=0.023 Score=54.22 Aligned_cols=130 Identities=18% Similarity=0.136 Sum_probs=83.5
Q ss_pred CCeeEEEEEEecCCCCCCCCeEEEecCCCCcccccccchhcCceEEccCCCCCCCCeeeccCCCCCCCCceEEEeCCCcc
Q 018994 52 EEAQLFYYFVKSDKNPKEDPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEASILFVDSPVGT 131 (348)
Q Consensus 52 ~~~~lfy~f~es~~~p~~~PlvlwlnGGPG~SS~~g~~~e~GP~~~~~~~~~g~~~~l~~n~~sW~~~anllfiD~PvG~ 131 (348)
.|..+|.-+.....+++.+-+|+.++|.=+-+|-. |.+.=. .|..+. .-+.-+|+. |.
T Consensus 36 rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~--~~~~a~-------------~l~~~g------~~v~a~D~~-Gh 93 (313)
T KOG1455|consen 36 RGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWR--YQSTAK-------------RLAKSG------FAVYAIDYE-GH 93 (313)
T ss_pred CCCEeEEEecccCCCCCCceEEEEEcCCcccchhh--HHHHHH-------------HHHhCC------CeEEEeecc-CC
Confidence 36789985544444456778999999865554321 111000 111111 125568985 99
Q ss_pred cccccccCCCCCcCchhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhcccccCCeeeeceeEec
Q 018994 132 GFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILG 211 (348)
Q Consensus 132 GfSy~~~~~~~~~~d~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inlkGi~ig 211 (348)
|.|-+. ..|..+-+..++|...|+..+- ...+++..|.|++|||.||-.+-.++.+ +. --..|+++.
T Consensus 94 G~SdGl--~~yi~~~d~~v~D~~~~~~~i~-~~~e~~~lp~FL~GeSMGGAV~Ll~~~k---~p-------~~w~G~ilv 160 (313)
T KOG1455|consen 94 GRSDGL--HAYVPSFDLVVDDVISFFDSIK-EREENKGLPRFLFGESMGGAVALLIALK---DP-------NFWDGAILV 160 (313)
T ss_pred CcCCCC--cccCCcHHHHHHHHHHHHHHHh-hccccCCCCeeeeecCcchHHHHHHHhh---CC-------cccccceee
Confidence 999643 3467777778888887776543 4567888899999999999877776665 11 126777777
Q ss_pred CCccC
Q 018994 212 NPRTD 216 (348)
Q Consensus 212 ng~~d 216 (348)
.|..-
T Consensus 161 aPmc~ 165 (313)
T KOG1455|consen 161 APMCK 165 (313)
T ss_pred ecccc
Confidence 77653
No 58
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.61 E-value=0.0025 Score=60.38 Aligned_cols=82 Identities=15% Similarity=0.118 Sum_probs=51.5
Q ss_pred CCceEEEeCCCcccccccccCCCCCcCchhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhcccc
Q 018994 119 EASILFVDSPVGTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEED 198 (348)
Q Consensus 119 ~anllfiD~PvG~GfSy~~~~~~~~~~d~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~ 198 (348)
-.||+.||-+.+..-.|... ..+....++++..+|+...+.. .....+++|+|+|.||+.+-.++.+..+
T Consensus 66 ~~nVi~vD~~~~~~~~y~~a----~~~~~~v~~~la~~l~~L~~~~-g~~~~~i~lIGhSlGa~vAg~~a~~~~~----- 135 (275)
T cd00707 66 DYNVIVVDWGRGANPNYPQA----VNNTRVVGAELAKFLDFLVDNT-GLSLENVHLIGHSLGAHVAGFAGKRLNG----- 135 (275)
T ss_pred CCEEEEEECccccccChHHH----HHhHHHHHHHHHHHHHHHHHhc-CCChHHEEEEEecHHHHHHHHHHHHhcC-----
Confidence 48999999774411111100 1233345666666666544432 2334589999999999999888876533
Q ss_pred cCCeeeeceeEecCCcc
Q 018994 199 IKPLINLQGYILGNPRT 215 (348)
Q Consensus 199 ~~~~inlkGi~igng~~ 215 (348)
.++.|+..+|..
T Consensus 136 -----~v~~iv~LDPa~ 147 (275)
T cd00707 136 -----KLGRITGLDPAG 147 (275)
T ss_pred -----ccceeEEecCCc
Confidence 377888877653
No 59
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=96.57 E-value=0.016 Score=55.78 Aligned_cols=139 Identities=19% Similarity=0.199 Sum_probs=90.5
Q ss_pred ceeEEEEEEeCCCCCeeEEEEEEecCCCCCCCCeEEEecCCCCcccccccchhcCceEEccCCCCCCCCeeeccCCCCCC
Q 018994 39 FELETGYVGVGESEEAQLFYYFVKSDKNPKEDPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTK 118 (348)
Q Consensus 39 ~~~~sGyl~v~~~~~~~lfy~f~es~~~p~~~PlvlwlnGGPG~SS~~g~~~e~GP~~~~~~~~~g~~~~l~~n~~sW~~ 118 (348)
.....+|++++. +++++.|. .++..|+|+.|+|=|=.+=.+-+-. +.|.. +
T Consensus 20 ~~~~hk~~~~~g-----I~~h~~e~--g~~~gP~illlHGfPe~wyswr~q~----------------~~la~------~ 70 (322)
T KOG4178|consen 20 SAISHKFVTYKG-----IRLHYVEG--GPGDGPIVLLLHGFPESWYSWRHQI----------------PGLAS------R 70 (322)
T ss_pred hhcceeeEEEcc-----EEEEEEee--cCCCCCEEEEEccCCccchhhhhhh----------------hhhhh------c
Confidence 345677888753 77777776 6889999999999887664431100 01111 0
Q ss_pred CCceEEEeCCCcccccccccCCCCCcCchhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhcccc
Q 018994 119 EASILFVDSPVGTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEED 198 (348)
Q Consensus 119 ~anllfiD~PvG~GfSy~~~~~~~~~~d~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~ 198 (348)
-..++.+|.. |.|+|-..... ..-+-+..+.|+..+|.. +...++++.|++||+..+=.+|..-.++.+.
T Consensus 71 ~~rviA~Dlr-GyG~Sd~P~~~-~~Yt~~~l~~di~~lld~-------Lg~~k~~lvgHDwGaivaw~la~~~Perv~~- 140 (322)
T KOG4178|consen 71 GYRVIAPDLR-GYGFSDAPPHI-SEYTIDELVGDIVALLDH-------LGLKKAFLVGHDWGAIVAWRLALFYPERVDG- 140 (322)
T ss_pred ceEEEecCCC-CCCCCCCCCCc-ceeeHHHHHHHHHHHHHH-------hccceeEEEeccchhHHHHHHHHhChhhcce-
Confidence 1578999975 99999754431 122455667777776652 3345899999999999999998877665322
Q ss_pred cCCeeeeceeEecCCccCcccc
Q 018994 199 IKPLINLQGYILGNPRTDMVVE 220 (348)
Q Consensus 199 ~~~~inlkGi~igng~~d~~~~ 220 (348)
.+++++... ||..++...
T Consensus 141 ---lv~~nv~~~-~p~~~~~~~ 158 (322)
T KOG4178|consen 141 ---LVTLNVPFP-NPKLKPLDS 158 (322)
T ss_pred ---EEEecCCCC-Ccccchhhh
Confidence 344444444 666666543
No 60
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=96.48 E-value=0.015 Score=52.50 Aligned_cols=54 Identities=19% Similarity=0.110 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhcccccCCeeeeceeEecCCcc
Q 018994 151 HHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRT 215 (348)
Q Consensus 151 ~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inlkGi~igng~~ 215 (348)
.++.++++...+++ .....+++|+|+|.||..+-.++.+-.+ .+.++++..|..
T Consensus 77 ~~~~~~i~~~~~~~-~id~~~i~l~G~S~Gg~~a~~~a~~~p~----------~~~~~~~~~g~~ 130 (212)
T TIGR01840 77 ESLHQLIDAVKANY-SIDPNRVYVTGLSAGGGMTAVLGCTYPD----------VFAGGASNAGLP 130 (212)
T ss_pred HHHHHHHHHHHHhc-CcChhheEEEEECHHHHHHHHHHHhCch----------hheEEEeecCCc
Confidence 34444444433443 2344589999999999877666653111 266776666553
No 61
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=96.45 E-value=0.0062 Score=53.93 Aligned_cols=77 Identities=14% Similarity=0.141 Sum_probs=51.4
Q ss_pred ceEEEeCCCcccccccccCCCCCcCchhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhcccccC
Q 018994 121 SILFVDSPVGTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIK 200 (348)
Q Consensus 121 nllfiD~PvG~GfSy~~~~~~~~~~d~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~ 200 (348)
+|+-+|+| |.|+|... .....+.-...++.+.+..+.++.+. .+++++|+||||..+-.+|..-.+
T Consensus 2 ~vi~~d~r-G~g~S~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~vG~S~Gg~~~~~~a~~~p~------- 67 (230)
T PF00561_consen 2 DVILFDLR-GFGYSSPH---WDPDFPDYTTDDLAADLEALREALGI---KKINLVGHSMGGMLALEYAAQYPE------- 67 (230)
T ss_dssp EEEEEECT-TSTTSSSC---CGSGSCTHCHHHHHHHHHHHHHHHTT---SSEEEEEETHHHHHHHHHHHHSGG-------
T ss_pred EEEEEeCC-CCCCCCCC---ccCCcccccHHHHHHHHHHHHHHhCC---CCeEEEEECCChHHHHHHHHHCch-------
Confidence 57889976 99999741 00011223345566666666665443 359999999999988777765433
Q ss_pred CeeeeceeEecCCc
Q 018994 201 PLINLQGYILGNPR 214 (348)
Q Consensus 201 ~~inlkGi~igng~ 214 (348)
.++++++.++.
T Consensus 68 ---~v~~lvl~~~~ 78 (230)
T PF00561_consen 68 ---RVKKLVLISPP 78 (230)
T ss_dssp ---GEEEEEEESES
T ss_pred ---hhcCcEEEeee
Confidence 38888888875
No 62
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=96.43 E-value=0.023 Score=55.52 Aligned_cols=145 Identities=18% Similarity=0.206 Sum_probs=87.0
Q ss_pred EEEEEEeCCCCCeeEEEEEEecCC-CC-CCCCeEEEecCCCCcccccccchhcCceEEccCCCCCCCCeeeccCCCCC-C
Q 018994 42 ETGYVGVGESEEAQLFYYFVKSDK-NP-KEDPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWT-K 118 (348)
Q Consensus 42 ~sGyl~v~~~~~~~lfy~f~es~~-~p-~~~PlvlwlnGGPG~SS~~g~~~e~GP~~~~~~~~~g~~~~l~~n~~sW~-~ 118 (348)
.+.-+.+++ ...++.+.+.... .+ ..+|++||++||=-|-+.--. ....+=-+|. +
T Consensus 62 ~~~dv~~~~--~~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~~~-------------------~~y~~~~~~~a~ 120 (336)
T KOG1515|consen 62 TSKDVTIDP--FTNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSANS-------------------PAYDSFCTRLAA 120 (336)
T ss_pred eeeeeEecC--CCCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCCCC-------------------chhHHHHHHHHH
Confidence 344444443 4668888776553 33 689999999999655432000 0000111222 3
Q ss_pred CCceEEEeCCCcccccccccCCCCCcCchhhHHHHHHHHHH-HHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhccc
Q 018994 119 EASILFVDSPVGTGFSYARTPHASQTGDFKQVHHLDQFLRK-WLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEE 197 (348)
Q Consensus 119 ~anllfiD~PvG~GfSy~~~~~~~~~~d~~~a~~~~~fL~~-f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~ 197 (348)
.+|.+-| .|+|--+.. ..+...-++.-+.+..+++. |+..+-..+ .++|+|.|-||-.+-.+|.++.+..
T Consensus 121 ~~~~vvv----SVdYRLAPE-h~~Pa~y~D~~~Al~w~~~~~~~~~~~D~~--rv~l~GDSaGGNia~~va~r~~~~~-- 191 (336)
T KOG1515|consen 121 ELNCVVV----SVDYRLAPE-HPFPAAYDDGWAALKWVLKNSWLKLGADPS--RVFLAGDSAGGNIAHVVAQRAADEK-- 191 (336)
T ss_pred HcCeEEE----ecCcccCCC-CCCCccchHHHHHHHHHHHhHHHHhCCCcc--cEEEEccCccHHHHHHHHHHHhhcc--
Confidence 4455532 355544322 22332222333334445554 777766654 5999999999999999999998753
Q ss_pred ccCCeeeeceeEecCCccCcc
Q 018994 198 DIKPLINLQGYILGNPRTDMV 218 (348)
Q Consensus 198 ~~~~~inlkGi~igng~~d~~ 218 (348)
...+.++|.++.-|++...
T Consensus 192 --~~~~ki~g~ili~P~~~~~ 210 (336)
T KOG1515|consen 192 --LSKPKIKGQILIYPFFQGT 210 (336)
T ss_pred --CCCcceEEEEEEecccCCC
Confidence 1257799999999988654
No 63
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=96.31 E-value=0.0077 Score=56.92 Aligned_cols=109 Identities=21% Similarity=0.286 Sum_probs=73.3
Q ss_pred CCCCeEEEecCCCCccccc-ccchhcCceEEccCCCCCCCCeeeccCCCCCCCCceEEEeCCCcccccccccCCCCCcCc
Q 018994 68 KEDPLLLWLTGGPGCSAFS-GLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEASILFVDSPVGTGFSYARTPHASQTGD 146 (348)
Q Consensus 68 ~~~PlvlwlnGGPG~SS~~-g~~~e~GP~~~~~~~~~g~~~~l~~n~~sW~~~anllfiD~PvG~GfSy~~~~~~~~~~d 146 (348)
..-|+++.++|| |.|.+. ..|. ..+..+- ..-++-+| -.|.|-+-..++.+ -+-
T Consensus 72 t~gpil~l~HG~-G~S~LSfA~~a----------------~el~s~~-----~~r~~a~D-lRgHGeTk~~~e~d--lS~ 126 (343)
T KOG2564|consen 72 TEGPILLLLHGG-GSSALSFAIFA----------------SELKSKI-----RCRCLALD-LRGHGETKVENEDD--LSL 126 (343)
T ss_pred CCccEEEEeecC-cccchhHHHHH----------------HHHHhhc-----ceeEEEee-ccccCccccCChhh--cCH
Confidence 456999999998 777664 4443 0111111 12236789 57999888776655 356
Q ss_pred hhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhcccccCCeeeeceeEecCCc
Q 018994 147 FKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPR 214 (348)
Q Consensus 147 ~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inlkGi~igng~ 214 (348)
+..++|+...++.||..-|. ++.|+|||.||-.....|..=. --+|-|+++.+=+
T Consensus 127 eT~~KD~~~~i~~~fge~~~----~iilVGHSmGGaIav~~a~~k~---------lpsl~Gl~viDVV 181 (343)
T KOG2564|consen 127 ETMSKDFGAVIKELFGELPP----QIILVGHSMGGAIAVHTAASKT---------LPSLAGLVVIDVV 181 (343)
T ss_pred HHHHHHHHHHHHHHhccCCC----ceEEEeccccchhhhhhhhhhh---------chhhhceEEEEEe
Confidence 67899999999998865443 7999999999988766554211 2247788776533
No 64
>PRK10115 protease 2; Provisional
Probab=96.31 E-value=0.017 Score=61.66 Aligned_cols=136 Identities=15% Similarity=0.107 Sum_probs=73.3
Q ss_pred CeeEEEEEEecC--CCCCCCCeEEEecCCCCcccccccchhcCceEEccCCCCCCCCeeeccCCCCCCCCceEEEeCCCc
Q 018994 53 EAQLFYYFVKSD--KNPKEDPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEASILFVDSPVG 130 (348)
Q Consensus 53 ~~~lfy~f~es~--~~p~~~PlvlwlnGGPG~SS~~g~~~e~GP~~~~~~~~~g~~~~l~~n~~sW~~~anllfiD~PvG 130 (348)
|..+-.|++-.. ......|+||+.+||||.+...++..+. .+|...-=++.+=.+.|
T Consensus 426 G~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~---------------------~~l~~rG~~v~~~n~RG 484 (686)
T PRK10115 426 GVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSR---------------------LSLLDRGFVYAIVHVRG 484 (686)
T ss_pred CCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHH---------------------HHHHHCCcEEEEEEcCC
Confidence 666776555322 1234569999999999998653332222 12222222222222444
Q ss_pred -ccccccccCCCCCcCchhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhcccccCCeeeeceeE
Q 018994 131 -TGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYI 209 (348)
Q Consensus 131 -~GfSy~~~~~~~~~~d~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inlkGi~ 209 (348)
+||...=...+....-...-+|+..+.+ |+....--....+.|.|-||||.-+-.++. +..+ -+++++
T Consensus 485 s~g~G~~w~~~g~~~~k~~~~~D~~a~~~-~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~---~~Pd-------lf~A~v 553 (686)
T PRK10115 485 GGELGQQWYEDGKFLKKKNTFNDYLDACD-ALLKLGYGSPSLCYGMGGSAGGMLMGVAIN---QRPE-------LFHGVI 553 (686)
T ss_pred CCccCHHHHHhhhhhcCCCcHHHHHHHHH-HHHHcCCCChHHeEEEEECHHHHHHHHHHh---cChh-------heeEEE
Confidence 3333211111000011123456666654 444443334467999999999985544433 2221 299999
Q ss_pred ecCCccCcccc
Q 018994 210 LGNPRTDMVVE 220 (348)
Q Consensus 210 igng~~d~~~~ 220 (348)
.+.|++|....
T Consensus 554 ~~vp~~D~~~~ 564 (686)
T PRK10115 554 AQVPFVDVVTT 564 (686)
T ss_pred ecCCchhHhhh
Confidence 99999998743
No 65
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=96.23 E-value=0.037 Score=54.69 Aligned_cols=136 Identities=12% Similarity=0.013 Sum_probs=72.7
Q ss_pred CeeEEEEEEecCCCCCCCCeEEEecCCCCcccccccc--hhcCceEEccCCCCCCCCeeec-cCCCCCCCCceEEEeCCC
Q 018994 53 EAQLFYYFVKSDKNPKEDPLLLWLTGGPGCSAFSGLA--YEIGPVNFNTVEYNGSLPTLRL-NPYSWTKEASILFVDSPV 129 (348)
Q Consensus 53 ~~~lfy~f~es~~~p~~~PlvlwlnGGPG~SS~~g~~--~e~GP~~~~~~~~~g~~~~l~~-n~~sW~~~anllfiD~Pv 129 (348)
+.+++|.-+-. .++...|.||.++|-+|.+..+... .+.+|=.+. .+.. ...--.+...||-+|.|-
T Consensus 32 ~~~~~y~~~G~-~~~~~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~---------~~~~~~~~l~~~~~~vi~~Dl~G 101 (379)
T PRK00175 32 PVELAYETYGT-LNADRSNAVLICHALTGDHHVAGPHSPDDPKPGWWD---------NMVGPGKPIDTDRYFVICSNVLG 101 (379)
T ss_pred CceEEEEeccc-cCCCCCCEEEEeCCcCCchhhcccccccCCCCcchh---------hccCCCCccCccceEEEeccCCC
Confidence 46788874321 1233469999999999977653211 000000000 0000 000002356899999874
Q ss_pred cccccccccC------CCC-----CcCchhhHHHHHHHHHHHHhhCCCCCCCC-eEEEeecccCccHHHHHHHHHhhccc
Q 018994 130 GTGFSYARTP------HAS-----QTGDFKQVHHLDQFLRKWLMDHPEFISNP-FYVGGDSYSGITVPALVQRISNENEE 197 (348)
Q Consensus 130 G~GfSy~~~~------~~~-----~~~d~~~a~~~~~fL~~f~~~~p~~~~~~-~yi~GESYgG~yvp~la~~i~~~~~~ 197 (348)
+.|.|-.... ..+ ..+-...++++..+|+ . +.-.+ ++|+|+|+||..+-.+|.+-.+.
T Consensus 102 ~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~---l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~--- 171 (379)
T PRK00175 102 GCKGSTGPSSINPDTGKPYGSDFPVITIRDWVRAQARLLD----A---LGITRLAAVVGGSMGGMQALEWAIDYPDR--- 171 (379)
T ss_pred CCCCCCCCCCCCCCCCCcccCCCCcCCHHHHHHHHHHHHH----H---hCCCCceEEEEECHHHHHHHHHHHhChHh---
Confidence 3455532110 000 1233344555555554 3 22235 58999999998888888864432
Q ss_pred ccCCeeeeceeEecCCcc
Q 018994 198 DIKPLINLQGYILGNPRT 215 (348)
Q Consensus 198 ~~~~~inlkGi~igng~~ 215 (348)
++++++.|+..
T Consensus 172 -------v~~lvl~~~~~ 182 (379)
T PRK00175 172 -------VRSALVIASSA 182 (379)
T ss_pred -------hhEEEEECCCc
Confidence 88888887654
No 66
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=96.07 E-value=0.02 Score=59.44 Aligned_cols=129 Identities=15% Similarity=0.110 Sum_probs=76.7
Q ss_pred CeeEEEEEEecCCCCCCCCeEEEecCCCCcccccccchhcCceEEccCCCCCCCCeeeccCCCCC-CCCceEEEeCCCcc
Q 018994 53 EAQLFYYFVKSDKNPKEDPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWT-KEASILFVDSPVGT 131 (348)
Q Consensus 53 ~~~lfy~f~es~~~p~~~PlvlwlnGGPG~SS~~g~~~e~GP~~~~~~~~~g~~~~l~~n~~sW~-~~anllfiD~PvG~ 131 (348)
|..|+.+.+.... ....|+||.++|-...+.... +. . . ....-|. +-..++-+|. .|.
T Consensus 6 G~~L~~~~~~P~~-~~~~P~Il~~~gyg~~~~~~~-----~~---~----------~-~~~~~l~~~Gy~vv~~D~-RG~ 64 (550)
T TIGR00976 6 GTRLAIDVYRPAG-GGPVPVILSRTPYGKDAGLRW-----GL---D----------K-TEPAWFVAQGYAVVIQDT-RGR 64 (550)
T ss_pred CCEEEEEEEecCC-CCCCCEEEEecCCCCchhhcc-----cc---c----------c-ccHHHHHhCCcEEEEEec-ccc
Confidence 5678876554332 346799999986533221100 00 0 0 0001122 2467888996 599
Q ss_pred cccccccCCCCCcCchhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhcccccCCeeeeceeEec
Q 018994 132 GFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILG 211 (348)
Q Consensus 132 GfSy~~~~~~~~~~d~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inlkGi~ig 211 (348)
|.|-..... .+ ...++|+.++|+ |+.+.|. ...++.++|.||||...-.+|.. .. -.||+++..
T Consensus 65 g~S~g~~~~---~~-~~~~~D~~~~i~-~l~~q~~-~~~~v~~~G~S~GG~~a~~~a~~---~~-------~~l~aiv~~ 128 (550)
T TIGR00976 65 GASEGEFDL---LG-SDEAADGYDLVD-WIAKQPW-CDGNVGMLGVSYLAVTQLLAAVL---QP-------PALRAIAPQ 128 (550)
T ss_pred ccCCCceEe---cC-cccchHHHHHHH-HHHhCCC-CCCcEEEEEeChHHHHHHHHhcc---CC-------CceeEEeec
Confidence 999654211 11 345677777765 7777664 34589999999999765555542 11 248999988
Q ss_pred CCccCcc
Q 018994 212 NPRTDMV 218 (348)
Q Consensus 212 ng~~d~~ 218 (348)
.+..|..
T Consensus 129 ~~~~d~~ 135 (550)
T TIGR00976 129 EGVWDLY 135 (550)
T ss_pred Ccccchh
Confidence 8887754
No 67
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=96.03 E-value=0.036 Score=52.13 Aligned_cols=79 Identities=15% Similarity=0.134 Sum_probs=52.6
Q ss_pred CceEEEeCCCcccccccccCCCCCcCchhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhccccc
Q 018994 120 ASILFVDSPVGTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDI 199 (348)
Q Consensus 120 anllfiD~PvG~GfSy~~~~~~~~~~d~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~ 199 (348)
.+++-+|.| |.|-|.... .+-....+|+..+++.+-+..|.+ .++.++|+|.||..+-.+|. ..
T Consensus 58 ~~v~~~Dl~-G~G~S~~~~-----~~~~~~~~d~~~~~~~l~~~~~g~--~~i~l~G~S~Gg~~a~~~a~----~~---- 121 (274)
T TIGR03100 58 FPVLRFDYR-GMGDSEGEN-----LGFEGIDADIAAAIDAFREAAPHL--RRIVAWGLCDAASAALLYAP----AD---- 121 (274)
T ss_pred CEEEEeCCC-CCCCCCCCC-----CCHHHHHHHHHHHHHHHHhhCCCC--CcEEEEEECHHHHHHHHHhh----hC----
Confidence 678899987 999885321 122345566777776544455544 36999999999976554442 11
Q ss_pred CCeeeeceeEecCCccCc
Q 018994 200 KPLINLQGYILGNPRTDM 217 (348)
Q Consensus 200 ~~~inlkGi~igng~~d~ 217 (348)
-.++|+++.||++..
T Consensus 122 ---~~v~~lil~~p~~~~ 136 (274)
T TIGR03100 122 ---LRVAGLVLLNPWVRT 136 (274)
T ss_pred ---CCccEEEEECCccCC
Confidence 149999999998653
No 68
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=95.97 E-value=0.021 Score=55.49 Aligned_cols=95 Identities=19% Similarity=0.131 Sum_probs=61.1
Q ss_pred CCceEEEeCCCcccccccccC-CCCCcCchhhHHHHHHHHHHHHhhC----------------CCCC-CCCeEEEeeccc
Q 018994 119 EASILFVDSPVGTGFSYARTP-HASQTGDFKQVHHLDQFLRKWLMDH----------------PEFI-SNPFYVGGDSYS 180 (348)
Q Consensus 119 ~anllfiD~PvG~GfSy~~~~-~~~~~~d~~~a~~~~~fL~~f~~~~----------------p~~~-~~~~yi~GESYg 180 (348)
-.+|+-+|.| |.|.|-.... ..+..+-+..++|+..+++..-+.. .++. ..|+||+|+|.|
T Consensus 74 G~~V~~~D~r-GHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmG 152 (332)
T TIGR01607 74 GYSVYGLDLQ-GHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMG 152 (332)
T ss_pred CCcEEEeccc-ccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCc
Confidence 4789999986 9999875432 1222345566788888887543310 0222 469999999999
Q ss_pred CccHHHHHHHHHhhcccccCCeeeeceeEecCCccC
Q 018994 181 GITVPALVQRISNENEEDIKPLINLQGYILGNPRTD 216 (348)
Q Consensus 181 G~yvp~la~~i~~~~~~~~~~~inlkGi~igng~~d 216 (348)
|..+-.++....+..+. .....++|+++.+|.+.
T Consensus 153 g~i~~~~~~~~~~~~~~--~~~~~i~g~i~~s~~~~ 186 (332)
T TIGR01607 153 GNIALRLLELLGKSNEN--NDKLNIKGCISLSGMIS 186 (332)
T ss_pred cHHHHHHHHHhcccccc--ccccccceEEEeccceE
Confidence 99888777655432110 00235899988787764
No 69
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=95.84 E-value=0.025 Score=57.27 Aligned_cols=80 Identities=10% Similarity=0.037 Sum_probs=51.0
Q ss_pred CCceEEEeCCCccccc-ccccCCCCCcCchhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhccc
Q 018994 119 EASILFVDSPVGTGFS-YARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEE 197 (348)
Q Consensus 119 ~anllfiD~PvG~GfS-y~~~~~~~~~~d~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~ 197 (348)
..||+-+|.| |-|-| |... ..+...+|+++.++|+...+.. .+.-.+++|+|+|.|||.+-.++.+...
T Consensus 73 d~nVI~VDw~-g~g~s~y~~a----~~~t~~vg~~la~lI~~L~~~~-gl~l~~VhLIGHSLGAhIAg~ag~~~p~---- 142 (442)
T TIGR03230 73 SANVIVVDWL-SRAQQHYPTS----AAYTKLVGKDVAKFVNWMQEEF-NYPWDNVHLLGYSLGAHVAGIAGSLTKH---- 142 (442)
T ss_pred CCEEEEEECC-CcCCCCCccc----cccHHHHHHHHHHHHHHHHHhh-CCCCCcEEEEEECHHHHHHHHHHHhCCc----
Confidence 4799999987 44433 2111 1233466777777776433322 3445689999999999988887764321
Q ss_pred ccCCeeeeceeEecCCc
Q 018994 198 DIKPLINLQGYILGNPR 214 (348)
Q Consensus 198 ~~~~~inlkGi~igng~ 214 (348)
.|..|+..+|.
T Consensus 143 ------rV~rItgLDPA 153 (442)
T TIGR03230 143 ------KVNRITGLDPA 153 (442)
T ss_pred ------ceeEEEEEcCC
Confidence 26677777764
No 70
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=95.68 E-value=0.0098 Score=53.39 Aligned_cols=93 Identities=11% Similarity=0.086 Sum_probs=59.1
Q ss_pred CCCceEEEeCCCcccccccccCCCCCcCchhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhccc
Q 018994 118 KEASILFVDSPVGTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEE 197 (348)
Q Consensus 118 ~~anllfiD~PvG~GfSy~~~~~~~~~~d~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~ 197 (348)
+=..|+.+|..-+.||+..-........-....+|+..+++. +.+.+......+.|+|.||||+.+-.++.+ ..
T Consensus 13 ~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~-l~~~~~iD~~ri~i~G~S~GG~~a~~~~~~---~~-- 86 (213)
T PF00326_consen 13 QGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEY-LIKQYYIDPDRIGIMGHSYGGYLALLAATQ---HP-- 86 (213)
T ss_dssp TT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHH-HHHTTSEEEEEEEEEEETHHHHHHHHHHHH---TC--
T ss_pred CCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHH-HhccccccceeEEEEcccccccccchhhcc---cc--
Confidence 346788999877777775422222112223456677777654 444445566789999999999988877662 21
Q ss_pred ccCCeeeeceeEecCCccCccccc
Q 018994 198 DIKPLINLQGYILGNPRTDMVVEQ 221 (348)
Q Consensus 198 ~~~~~inlkGi~igng~~d~~~~~ 221 (348)
-.++.++.++|.+|+....
T Consensus 87 -----~~f~a~v~~~g~~d~~~~~ 105 (213)
T PF00326_consen 87 -----DRFKAAVAGAGVSDLFSYY 105 (213)
T ss_dssp -----CGSSEEEEESE-SSTTCSB
T ss_pred -----eeeeeeeccceecchhccc
Confidence 1379999999999876543
No 71
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=95.54 E-value=0.0091 Score=59.58 Aligned_cols=81 Identities=21% Similarity=0.178 Sum_probs=53.9
Q ss_pred CceEEEeCCCcccccccccCCCCCcCchhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhccccc
Q 018994 120 ASILFVDSPVGTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDI 199 (348)
Q Consensus 120 anllfiD~PvG~GfSy~~~~~~~~~~d~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~ 199 (348)
-+||=||-| |||+|.... +. .| ...+...+.+|+..-|+.....+.++|-|.||.|++.+|..=.+
T Consensus 219 iA~LtvDmP-G~G~s~~~~---l~-~D---~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~------ 284 (411)
T PF06500_consen 219 IAMLTVDMP-GQGESPKWP---LT-QD---SSRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDP------ 284 (411)
T ss_dssp -EEEEE--T-TSGGGTTT----S--S----CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTT------
T ss_pred CEEEEEccC-CCcccccCC---CC-cC---HHHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhccc------
Confidence 468899999 999984221 11 11 13466777888889999988899999999999999999973212
Q ss_pred CCeeeeceeEecCCccCcc
Q 018994 200 KPLINLQGYILGNPRTDMV 218 (348)
Q Consensus 200 ~~~inlkGi~igng~~d~~ 218 (348)
.|||++.-.|.++..
T Consensus 285 ----RlkavV~~Ga~vh~~ 299 (411)
T PF06500_consen 285 ----RLKAVVALGAPVHHF 299 (411)
T ss_dssp ----T-SEEEEES---SCG
T ss_pred ----ceeeEeeeCchHhhh
Confidence 289987766665543
No 72
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=95.15 E-value=0.055 Score=48.72 Aligned_cols=78 Identities=17% Similarity=0.322 Sum_probs=54.6
Q ss_pred CCceEEEeCCCcccccccccCCCCCcCchhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhcccc
Q 018994 119 EASILFVDSPVGTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEED 198 (348)
Q Consensus 119 ~anllfiD~PvG~GfSy~~~~~~~~~~d~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~ 198 (348)
..++..|+.| |-+ .......+-++.|+...+.|+. ..|+ .|++|+|.|+||..+=.+|.++.++.
T Consensus 27 ~~~v~~i~~~-~~~-----~~~~~~~si~~la~~y~~~I~~---~~~~---gp~~L~G~S~Gg~lA~E~A~~Le~~G--- 91 (229)
T PF00975_consen 27 VIGVYGIEYP-GRG-----DDEPPPDSIEELASRYAEAIRA---RQPE---GPYVLAGWSFGGILAFEMARQLEEAG--- 91 (229)
T ss_dssp EEEEEEECST-TSC-----TTSHEESSHHHHHHHHHHHHHH---HTSS---SSEEEEEETHHHHHHHHHHHHHHHTT---
T ss_pred eEEEEEEecC-CCC-----CCCCCCCCHHHHHHHHHHHhhh---hCCC---CCeeehccCccHHHHHHHHHHHHHhh---
Confidence 3567778866 554 1111234666777777777763 4444 29999999999999999999998763
Q ss_pred cCCeeeeceeEecCCcc
Q 018994 199 IKPLINLQGYILGNPRT 215 (348)
Q Consensus 199 ~~~~inlkGi~igng~~ 215 (348)
...+.+++.++..
T Consensus 92 ----~~v~~l~liD~~~ 104 (229)
T PF00975_consen 92 ----EEVSRLILIDSPP 104 (229)
T ss_dssp -----SESEEEEESCSS
T ss_pred ----hccCceEEecCCC
Confidence 4588888888543
No 73
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=95.14 E-value=0.074 Score=57.50 Aligned_cols=166 Identities=21% Similarity=0.179 Sum_probs=90.8
Q ss_pred EEEEEEeCCCCCeeEEEEEEecC--CCCCCCCeEEEecCCCCcccccccchhcCceEEccCCCCCCCCeeeccCCCCCC-
Q 018994 42 ETGYVGVGESEEAQLFYYFVKSD--KNPKEDPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTK- 118 (348)
Q Consensus 42 ~sGyl~v~~~~~~~lfy~f~es~--~~p~~~PlvlwlnGGPG~SS~~g~~~e~GP~~~~~~~~~g~~~~l~~n~~sW~~- 118 (348)
..+-+.++ |...++++.... .+.+.-||+++..|||++-+..+.+. +..|++.+..
T Consensus 499 ~~~~i~~~---~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~~------------------~~~~~~~~s~~ 557 (755)
T KOG2100|consen 499 EFGKIEID---GITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFS------------------VDWNEVVVSSR 557 (755)
T ss_pred eeEEEEec---cEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeEE------------------ecHHHHhhccC
Confidence 34444442 456667666443 23346799999999999433322221 2234444443
Q ss_pred CCceEEEeCCCcccccccccCCC-C-CcCchhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhcc
Q 018994 119 EASILFVDSPVGTGFSYARTPHA-S-QTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENE 196 (348)
Q Consensus 119 ~anllfiD~PvG~GfSy~~~~~~-~-~~~d~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~ 196 (348)
-+=++.|| +.|+|+.=..-... + .-++. ..+|....++.+.+.+ ..-...+.|+|.||||-. +..++...+
T Consensus 558 g~~v~~vd-~RGs~~~G~~~~~~~~~~lG~~-ev~D~~~~~~~~~~~~-~iD~~ri~i~GwSyGGy~----t~~~l~~~~ 630 (755)
T KOG2100|consen 558 GFAVLQVD-GRGSGGYGWDFRSALPRNLGDV-EVKDQIEAVKKVLKLP-FIDRSRVAIWGWSYGGYL----TLKLLESDP 630 (755)
T ss_pred CeEEEEEc-CCCcCCcchhHHHHhhhhcCCc-chHHHHHHHHHHHhcc-cccHHHeEEeccChHHHH----HHHHhhhCc
Confidence 24567788 78888653211000 1 12222 2355656666666665 333446999999999964 333333321
Q ss_pred cccCCeeeeceeEecCCccCccccccccccccccCCCCCHHH--HHHH
Q 018994 197 EDIKPLINLQGYILGNPRTDMVVEQNSQIPFAHGMGLISNEL--YESL 242 (348)
Q Consensus 197 ~~~~~~inlkGi~igng~~d~~~~~~~~~~~~~~~gli~~~~--~~~~ 242 (348)
.--+|--+..+|++|...-...+.+- .+|+-+++. |++.
T Consensus 631 -----~~~fkcgvavaPVtd~~~yds~~ter--ymg~p~~~~~~y~e~ 671 (755)
T KOG2100|consen 631 -----GDVFKCGVAVAPVTDWLYYDSTYTER--YMGLPSENDKGYEES 671 (755)
T ss_pred -----CceEEEEEEecceeeeeeecccccHh--hcCCCccccchhhhc
Confidence 12367768889999887332222221 266666544 5443
No 74
>PLN00021 chlorophyllase
Probab=95.00 E-value=0.17 Score=48.89 Aligned_cols=116 Identities=16% Similarity=0.100 Sum_probs=63.9
Q ss_pred CCCCCeEEEecCCCCcccccccchhcCceEEccCCCCCCCCeeeccCCCCCCCCceEEEeCCCcccccccccCCCCCcCc
Q 018994 67 PKEDPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEASILFVDSPVGTGFSYARTPHASQTGD 146 (348)
Q Consensus 67 p~~~PlvlwlnGGPG~SS~~g~~~e~GP~~~~~~~~~g~~~~l~~n~~sW~~~anllfiD~PvG~GfSy~~~~~~~~~~d 146 (348)
..+.|+|+|++|+.+....+..+.+ .| .+| -..++.+|.+ | ++.... ..+
T Consensus 49 ~g~~PvVv~lHG~~~~~~~y~~l~~----------------~L----as~--G~~VvapD~~-g--~~~~~~-----~~~ 98 (313)
T PLN00021 49 AGTYPVLLFLHGYLLYNSFYSQLLQ----------------HI----ASH--GFIVVAPQLY-T--LAGPDG-----TDE 98 (313)
T ss_pred CCCCCEEEEECCCCCCcccHHHHHH----------------HH----HhC--CCEEEEecCC-C--cCCCCc-----hhh
Confidence 4567999999999765543322110 01 111 1355666654 2 221111 112
Q ss_pred hhhHHHHHHHHHHHHhh----CCCCCCCCeEEEeecccCccHHHHHHHHHhhcccccCCeeeeceeEecCCccCc
Q 018994 147 FKQVHHLDQFLRKWLMD----HPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTDM 217 (348)
Q Consensus 147 ~~~a~~~~~fL~~f~~~----~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inlkGi~igng~~d~ 217 (348)
.+.+.++..++.+-++. ..+...++++|+|+|.||..+-.+|....+.. ....+++++..+|+...
T Consensus 99 i~d~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~-----~~~~v~ali~ldPv~g~ 168 (313)
T PLN00021 99 IKDAAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVS-----LPLKFSALIGLDPVDGT 168 (313)
T ss_pred HHHHHHHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccc-----cccceeeEEeecccccc
Confidence 23344555555543322 11233457999999999998888887544321 12458888888886543
No 75
>PRK10162 acetyl esterase; Provisional
Probab=94.88 E-value=0.09 Score=50.71 Aligned_cols=45 Identities=13% Similarity=0.065 Sum_probs=34.9
Q ss_pred CCCeEEEeecccCccHHHHHHHHHhhcccccCCeeeeceeEecCCccCc
Q 018994 169 SNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTDM 217 (348)
Q Consensus 169 ~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inlkGi~igng~~d~ 217 (348)
.+++.|+|+|.||+.+..++....+... ....++|+++..|+++.
T Consensus 153 ~~~i~l~G~SaGG~la~~~a~~~~~~~~----~~~~~~~~vl~~p~~~~ 197 (318)
T PRK10162 153 MSRIGFAGDSAGAMLALASALWLRDKQI----DCGKVAGVLLWYGLYGL 197 (318)
T ss_pred hhHEEEEEECHHHHHHHHHHHHHHhcCC----CccChhheEEECCccCC
Confidence 4589999999999999999887755421 12457899999998875
No 76
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=94.69 E-value=0.15 Score=50.84 Aligned_cols=109 Identities=22% Similarity=0.277 Sum_probs=69.4
Q ss_pred CCCCCeEEEecCCCCccccc------ccchhcCceEEccCCCCCCCCeeeccCCCCCCCCceEEEeCCCcccccccccCC
Q 018994 67 PKEDPLLLWLTGGPGCSAFS------GLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEASILFVDSPVGTGFSYARTPH 140 (348)
Q Consensus 67 p~~~PlvlwlnGGPG~SS~~------g~~~e~GP~~~~~~~~~g~~~~l~~n~~sW~~~anllfiD~PvG~GfSy~~~~~ 140 (348)
..++|+|+.+.|=.|.|.-. ....+.| |+ ++-.. +.|.|-|-.+++.
T Consensus 122 ~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G-~r-------------------------~VVfN-~RG~~g~~LtTpr 174 (409)
T KOG1838|consen 122 DGTDPIVVILPGLTGGSHESYVRHLVHEAQRKG-YR-------------------------VVVFN-HRGLGGSKLTTPR 174 (409)
T ss_pred CCCCcEEEEecCCCCCChhHHHHHHHHHHHhCC-cE-------------------------EEEEC-CCCCCCCccCCCc
Confidence 46789999999999988642 2233334 22 22222 6788888776665
Q ss_pred CCCcCchhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhcccccCCeeeeceeEecCCcc
Q 018994 141 ASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRT 215 (348)
Q Consensus 141 ~~~~~d~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inlkGi~igng~~ 215 (348)
-|.-++.+ |+.++++---++||+ .++|.+|.|+||..+ .+++-+..++. -=..|++|-|||-
T Consensus 175 ~f~ag~t~---Dl~~~v~~i~~~~P~---a~l~avG~S~Gg~iL---~nYLGE~g~~~----~l~~a~~v~~Pwd 236 (409)
T KOG1838|consen 175 LFTAGWTE---DLREVVNHIKKRYPQ---APLFAVGFSMGGNIL---TNYLGEEGDNT----PLIAAVAVCNPWD 236 (409)
T ss_pred eeecCCHH---HHHHHHHHHHHhCCC---CceEEEEecchHHHH---HHHhhhccCCC----CceeEEEEeccch
Confidence 55544443 344444433357887 499999999999854 55555543321 2267888999984
No 77
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=94.42 E-value=0.054 Score=44.66 Aligned_cols=96 Identities=22% Similarity=0.228 Sum_probs=56.5
Q ss_pred eEEEecCCCCcccccccchhcCceEEccCCCCCCCCeeeccCCCCCCCCceEEEeCCCcccccccccCCCCCcCchhhHH
Q 018994 72 LLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEASILFVDSPVGTGFSYARTPHASQTGDFKQVH 151 (348)
Q Consensus 72 lvlwlnGGPG~SS~~g~~~e~GP~~~~~~~~~g~~~~l~~n~~sW~~~anllfiD~PvG~GfSy~~~~~~~~~~d~~~a~ 151 (348)
+||+++|+.|....+..+.+ .+... -.+++.+|.| |.|.+. ....++
T Consensus 1 ~vv~~HG~~~~~~~~~~~~~----------------~l~~~------G~~v~~~~~~-~~~~~~----------~~~~~~ 47 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQPLAE----------------ALAEQ------GYAVVAFDYP-GHGDSD----------GADAVE 47 (145)
T ss_dssp EEEEECTTTTTTHHHHHHHH----------------HHHHT------TEEEEEESCT-TSTTSH----------HSHHHH
T ss_pred CEEEECCCCCCHHHHHHHHH----------------HHHHC------CCEEEEEecC-CCCccc----------hhHHHH
Confidence 58999999776554322221 01111 2456777865 555541 111233
Q ss_pred HHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhcccccCCeeeeceeEecCCccC
Q 018994 152 HLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTD 216 (348)
Q Consensus 152 ~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inlkGi~igng~~d 216 (348)
++++.+. .+++ ..++++|+|+|.||..+..++.+- -.+++++.-+|+.+
T Consensus 48 ~~~~~~~---~~~~--~~~~i~l~G~S~Gg~~a~~~~~~~-----------~~v~~~v~~~~~~~ 96 (145)
T PF12695_consen 48 RVLADIR---AGYP--DPDRIILIGHSMGGAIAANLAARN-----------PRVKAVVLLSPYPD 96 (145)
T ss_dssp HHHHHHH---HHHC--TCCEEEEEEETHHHHHHHHHHHHS-----------TTESEEEEESESSG
T ss_pred HHHHHHH---hhcC--CCCcEEEEEEccCcHHHHHHhhhc-----------cceeEEEEecCccc
Confidence 3333332 3233 456999999999999888777732 13889998888543
No 78
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=94.20 E-value=0.37 Score=44.27 Aligned_cols=123 Identities=20% Similarity=0.264 Sum_probs=80.2
Q ss_pred CeeEEEEEEecCCCCCCCCeEEEecCCCCcccccccchhcCceEEccCCCCCCCCeeeccCCCCCCCCceEEEeCCCccc
Q 018994 53 EAQLFYYFVKSDKNPKEDPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEASILFVDSPVGTG 132 (348)
Q Consensus 53 ~~~lfy~f~es~~~p~~~PlvlwlnGGPG~SS~~g~~~e~GP~~~~~~~~~g~~~~l~~n~~sW~~~anllfiD~PvG~G 132 (348)
...|.=|.+.+++ .+|.+|+++|--|- .|++. .... .. | -+-..||+-+| =.|.|
T Consensus 64 ~vtL~a~~~~~E~---S~pTlLyfh~NAGN---mGhr~------~i~~--------~f---y-~~l~mnv~ivs-YRGYG 118 (300)
T KOG4391|consen 64 KVTLDAYLMLSES---SRPTLLYFHANAGN---MGHRL------PIAR--------VF---Y-VNLKMNVLIVS-YRGYG 118 (300)
T ss_pred ceeEeeeeecccC---CCceEEEEccCCCc---ccchh------hHHH--------HH---H-HHcCceEEEEE-eeccc
Confidence 4566666665543 78999999977553 23332 1100 00 0 12257888888 47999
Q ss_pred ccccccCCCCCcCchhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhcccccCCeeeeceeEecC
Q 018994 133 FSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGN 212 (348)
Q Consensus 133 fSy~~~~~~~~~~d~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inlkGi~ign 212 (348)
-|-+...+.=-.-|.+ +..+++..+|...+++++++|.|-||..+-.+|.+-.+ .+.++++-|
T Consensus 119 ~S~GspsE~GL~lDs~-------avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~----------ri~~~ivEN 181 (300)
T KOG4391|consen 119 KSEGSPSEEGLKLDSE-------AVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSD----------RISAIIVEN 181 (300)
T ss_pred cCCCCccccceeccHH-------HHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchh----------heeeeeeec
Confidence 9976543211122332 22345568899999999999999999988888875443 378899988
Q ss_pred CccCc
Q 018994 213 PRTDM 217 (348)
Q Consensus 213 g~~d~ 217 (348)
-+++-
T Consensus 182 TF~SI 186 (300)
T KOG4391|consen 182 TFLSI 186 (300)
T ss_pred hhccc
Confidence 88764
No 79
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=93.97 E-value=0.51 Score=45.87 Aligned_cols=134 Identities=12% Similarity=0.036 Sum_probs=68.7
Q ss_pred CeeEEEEEEecCCCCCCCCeEEEecCCCCcccccccchh-cCceEEccCCCCCCCCeeeccCCCC-CCCCceEEEeCCCc
Q 018994 53 EAQLFYYFVKSDKNPKEDPLLLWLTGGPGCSAFSGLAYE-IGPVNFNTVEYNGSLPTLRLNPYSW-TKEASILFVDSPVG 130 (348)
Q Consensus 53 ~~~lfy~f~es~~~p~~~PlvlwlnGGPG~SS~~g~~~e-~GP~~~~~~~~~g~~~~l~~n~~sW-~~~anllfiD~PvG 130 (348)
+.+++|.-.... +....|.||+++|=.|.+-.. ...+ ..|=.+.. +..-.-.. .+...|+-+|.| |
T Consensus 15 ~~~~~y~~~g~~-~~~~~~~vll~Hg~~~~~~~~-~~~~~~~~~~w~~---------~~~~~~~l~~~~~~vi~~D~~-G 82 (351)
T TIGR01392 15 DVRVAYETYGTL-NAERSNAVLVCHALTGDAHVA-GYHDDGDPGWWDD---------LIGPGRAIDTDRYFVVCSNVL-G 82 (351)
T ss_pred CceEEEEecccc-CCCCCCEEEEcCCcCcchhhc-ccCCCCCCCchhh---------ccCCCCCcCCCceEEEEecCC-C
Confidence 577888643221 123458899999877754321 0000 00000000 00000011 234689999987 7
Q ss_pred --cccccccc--CCC--C-----CcCchhhHHHHHHHHHHHHhhCCCCCCCC-eEEEeecccCccHHHHHHHHHhhcccc
Q 018994 131 --TGFSYART--PHA--S-----QTGDFKQVHHLDQFLRKWLMDHPEFISNP-FYVGGDSYSGITVPALVQRISNENEED 198 (348)
Q Consensus 131 --~GfSy~~~--~~~--~-----~~~d~~~a~~~~~fL~~f~~~~p~~~~~~-~yi~GESYgG~yvp~la~~i~~~~~~~ 198 (348)
.|-|-..+ ... + ..+-...++++..+++ .. .-.+ ++|+|+|+||..+-.+|.+-.+
T Consensus 83 ~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~l---~~~~~~~l~G~S~Gg~ia~~~a~~~p~----- 150 (351)
T TIGR01392 83 GCYGSTGPSSINPGGRPYGSDFPLITIRDDVKAQKLLLD----HL---GIEQIAAVVGGSMGGMQALEWAIDYPE----- 150 (351)
T ss_pred CCCCCCCCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHH----Hc---CCCCceEEEEECHHHHHHHHHHHHChH-----
Confidence 44442111 000 1 1223344555555544 32 2235 9999999999888888875332
Q ss_pred cCCeeeeceeEecCCcc
Q 018994 199 IKPLINLQGYILGNPRT 215 (348)
Q Consensus 199 ~~~~inlkGi~igng~~ 215 (348)
.++++++.++..
T Consensus 151 -----~v~~lvl~~~~~ 162 (351)
T TIGR01392 151 -----RVRAIVVLATSA 162 (351)
T ss_pred -----hhheEEEEccCC
Confidence 278888877654
No 80
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=93.79 E-value=0.23 Score=48.36 Aligned_cols=66 Identities=21% Similarity=0.420 Sum_probs=43.9
Q ss_pred CceEEEeCCCcccccccccCCCCCcCchhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhh
Q 018994 120 ASILFVDSPVGTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNE 194 (348)
Q Consensus 120 anllfiD~PvG~GfSy~~~~~~~~~~d~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~ 194 (348)
--++=||-| |-|+|-..+. +..-++.+..+.++.|+.. +...+++|+|+||||..+-.+|....+.
T Consensus 87 ~~v~aiDl~-G~g~~s~~~~-----~~~y~~~~~v~~i~~~~~~---~~~~~~~lvghS~Gg~va~~~Aa~~P~~ 152 (326)
T KOG1454|consen 87 LRVLAIDLP-GHGYSSPLPR-----GPLYTLRELVELIRRFVKE---VFVEPVSLVGHSLGGIVALKAAAYYPET 152 (326)
T ss_pred eEEEEEecC-CCCcCCCCCC-----CCceehhHHHHHHHHHHHh---hcCcceEEEEeCcHHHHHHHHHHhCccc
Confidence 456779987 7674322111 1113455566677776663 4455899999999999999999876554
No 81
>PRK11460 putative hydrolase; Provisional
Probab=93.53 E-value=0.26 Score=45.26 Aligned_cols=36 Identities=17% Similarity=0.126 Sum_probs=23.7
Q ss_pred HHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHH
Q 018994 153 LDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQ 189 (348)
Q Consensus 153 ~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~ 189 (348)
+.++++.+..+ .....++++|+|.|.||..+-.++.
T Consensus 87 l~~~i~~~~~~-~~~~~~~i~l~GfS~Gg~~al~~a~ 122 (232)
T PRK11460 87 FIETVRYWQQQ-SGVGASATALIGFSQGAIMALEAVK 122 (232)
T ss_pred HHHHHHHHHHh-cCCChhhEEEEEECHHHHHHHHHHH
Confidence 44444433333 3344568999999999998877665
No 82
>PLN02872 triacylglycerol lipase
Probab=93.38 E-value=0.42 Score=47.79 Aligned_cols=125 Identities=14% Similarity=0.043 Sum_probs=68.5
Q ss_pred CceeEEEEEEeCCCCCeeEEEEEEecCC---CCCCCCeEEEecCCCCcccccccchhcCceEEccCCCCCCCCeeeccCC
Q 018994 38 PFELETGYVGVGESEEAQLFYYFVKSDK---NPKEDPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPY 114 (348)
Q Consensus 38 ~~~~~sGyl~v~~~~~~~lfy~f~es~~---~p~~~PlvlwlnGGPG~SS~~g~~~e~GP~~~~~~~~~g~~~~l~~n~~ 114 (348)
.+..+.-+|+..+ |-.|-.+-+...+ .+..+|+|+.++|..++|..+..- +|-.--. ..|...
T Consensus 41 gy~~e~h~v~T~D--Gy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~w~~~---~~~~sla-------~~La~~-- 106 (395)
T PLN02872 41 GYSCTEHTIQTKD--GYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDAWFLN---SPEQSLG-------FILADH-- 106 (395)
T ss_pred CCCceEEEEECCC--CcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccceeec---CcccchH-------HHHHhC--
Confidence 4556677777655 4344443333221 234578999999998888776322 2210000 001111
Q ss_pred CCCCCCceEEEeCCCcccccccccC-----CCC-CcCchhhH-HHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHH
Q 018994 115 SWTKEASILFVDSPVGTGFSYARTP-----HAS-QTGDFKQV-HHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVP 185 (348)
Q Consensus 115 sW~~~anllfiD~PvG~GfSy~~~~-----~~~-~~~d~~~a-~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp 185 (348)
-.++.-.|. .|.|+|+.... ..+ ..+-++.| .|+-++++...+.. ..+++++|+|.||...-
T Consensus 107 ----GydV~l~n~-RG~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~----~~~v~~VGhS~Gg~~~~ 175 (395)
T PLN02872 107 ----GFDVWVGNV-RGTRWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSIT----NSKIFIVGHSQGTIMSL 175 (395)
T ss_pred ----CCCcccccc-cccccccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhcc----CCceEEEEECHHHHHHH
Confidence 124444664 48888764221 111 23444566 67777777655432 34899999999996543
No 83
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=93.33 E-value=0.28 Score=45.13 Aligned_cols=50 Identities=14% Similarity=0.131 Sum_probs=34.7
Q ss_pred HHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhcccccCCeeeeceeEecCCcc
Q 018994 156 FLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRT 215 (348)
Q Consensus 156 fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inlkGi~igng~~ 215 (348)
.|.+.+.....-..+.+|++|.|-||...-.|+....+. |.++++..|..
T Consensus 83 ~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~----------faa~a~~sG~~ 132 (220)
T PF10503_consen 83 ALVDYVAARYNIDPSRVYVTGLSNGGMMANVLACAYPDL----------FAAVAVVSGVP 132 (220)
T ss_pred HHHHhHhhhcccCCCceeeEEECHHHHHHHHHHHhCCcc----------ceEEEeecccc
Confidence 333344444456677999999999998888777754442 77777777664
No 84
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=92.52 E-value=0.44 Score=44.93 Aligned_cols=118 Identities=17% Similarity=0.236 Sum_probs=71.7
Q ss_pred CCeEEEecCCCCcccccccchhcCceEEccCCCCCCCCeeeccCCCCCCCCceEEEeCCCcccccccccC-----CCCCc
Q 018994 70 DPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEASILFVDSPVGTGFSYARTP-----HASQT 144 (348)
Q Consensus 70 ~PlvlwlnGGPG~SS~~g~~~e~GP~~~~~~~~~g~~~~l~~n~~sW~~~anllfiD~PvG~GfSy~~~~-----~~~~~ 144 (348)
+++++|+-|-||...-+--|.+ .|..+ .+....|+=+.. .|+|..... +.-..
T Consensus 2 ~~li~~IPGNPGlv~fY~~Fl~----------------~L~~~---l~~~~~i~~ish---~Gh~~~~~~~~~~~~~~~~ 59 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEFYEEFLS----------------ALYEK---LNPQFEILGISH---AGHSTSPSNSKFSPNGRLF 59 (266)
T ss_pred cEEEEEECCCCChHHHHHHHHH----------------HHHHh---CCCCCeeEEecC---CCCcCCcccccccCCCCcc
Confidence 5899999999999877644431 11111 023344444442 455544332 11224
Q ss_pred CchhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhcccccCCeeeeceeEecCCccCc
Q 018994 145 GDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTDM 217 (348)
Q Consensus 145 ~d~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inlkGi~igng~~d~ 217 (348)
+-+++.+.-.+||+++....+ ....+++|.|||=|+..+-.+..++. ....+++++++.=|.+..
T Consensus 60 sL~~QI~hk~~~i~~~~~~~~-~~~~~liLiGHSIGayi~levl~r~~-------~~~~~V~~~~lLfPTi~~ 124 (266)
T PF10230_consen 60 SLQDQIEHKIDFIKELIPQKN-KPNVKLILIGHSIGAYIALEVLKRLP-------DLKFRVKKVILLFPTIED 124 (266)
T ss_pred CHHHHHHHHHHHHHHHhhhhc-CCCCcEEEEeCcHHHHHHHHHHHhcc-------ccCCceeEEEEeCCcccc
Confidence 667788888999998887654 24458999999988655544444443 123567777766666543
No 85
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=91.33 E-value=0.25 Score=46.33 Aligned_cols=83 Identities=19% Similarity=0.180 Sum_probs=56.0
Q ss_pred CceEEEeCCCcccccccccCCCCCcCchhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhccccc
Q 018994 120 ASILFVDSPVGTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDI 199 (348)
Q Consensus 120 anllfiD~PvG~GfSy~~~~~~~~~~d~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~ 199 (348)
..+|.+| ..|+|-|.+.-... ..+.++|.++.| +|+.+.|- .+-++-++|.||+|.....+|..-
T Consensus 58 Y~vV~~D-~RG~g~S~G~~~~~----~~~e~~D~~d~I-~W~~~Qpw-s~G~VGm~G~SY~G~~q~~~A~~~-------- 122 (272)
T PF02129_consen 58 YAVVVQD-VRGTGGSEGEFDPM----SPNEAQDGYDTI-EWIAAQPW-SNGKVGMYGISYGGFTQWAAAARR-------- 122 (272)
T ss_dssp -EEEEEE--TTSTTS-S-B-TT----SHHHHHHHHHHH-HHHHHCTT-EEEEEEEEEETHHHHHHHHHHTTT--------
T ss_pred CEEEEEC-CcccccCCCccccC----ChhHHHHHHHHH-HHHHhCCC-CCCeEEeeccCHHHHHHHHHHhcC--------
Confidence 4578899 68999997654321 445667777766 58877754 444799999999999888777621
Q ss_pred CCeeeeceeEecCCccCccc
Q 018994 200 KPLINLQGYILGNPRTDMVV 219 (348)
Q Consensus 200 ~~~inlkGi~igng~~d~~~ 219 (348)
.-.||.|+..-+..|...
T Consensus 123 --~p~LkAi~p~~~~~d~~~ 140 (272)
T PF02129_consen 123 --PPHLKAIVPQSGWSDLYR 140 (272)
T ss_dssp ---TTEEEEEEESE-SBTCC
T ss_pred --CCCceEEEecccCCcccc
Confidence 223999999888877653
No 86
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=91.33 E-value=0.27 Score=43.63 Aligned_cols=63 Identities=25% Similarity=0.380 Sum_probs=46.0
Q ss_pred hhHHHHHHHHHHHHhhC---CCCCCCCeEEEeecccCccHHHHHHHHHhhcccccCCeeeeceeEecCCccCc
Q 018994 148 KQVHHLDQFLRKWLMDH---PEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTDM 217 (348)
Q Consensus 148 ~~a~~~~~fL~~f~~~~---p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inlkGi~igng~~d~ 217 (348)
+..+|..++++ |+.++ -.+..++++|+|+|-||+.+-.++..+.+.. ...++++++..|++|.
T Consensus 47 ~~~~D~~~a~~-~l~~~~~~~~~d~~~i~l~G~SAGg~la~~~~~~~~~~~------~~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 47 AALEDVKAAYR-WLLKNADKLGIDPERIVLIGDSAGGHLALSLALRARDRG------LPKPKGIILISPWTDL 112 (211)
T ss_dssp HHHHHHHHHHH-HHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTT------TCHESEEEEESCHSST
T ss_pred cccccccccee-eeccccccccccccceEEeecccccchhhhhhhhhhhhc------ccchhhhhcccccccc
Confidence 34455655554 33333 1355568999999999999999998887753 1239999999999877
No 87
>PRK11071 esterase YqiA; Provisional
Probab=91.23 E-value=0.53 Score=41.89 Aligned_cols=47 Identities=23% Similarity=0.340 Sum_probs=31.6
Q ss_pred HHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhcccccCCeeeeceeEecCCccCc
Q 018994 155 QFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTDM 217 (348)
Q Consensus 155 ~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inlkGi~igng~~d~ 217 (348)
+++.++.+.. ..++++|+|.|.||.++-.+|.+.. .+ +++.||..+|
T Consensus 49 ~~l~~l~~~~---~~~~~~lvG~S~Gg~~a~~~a~~~~------------~~-~vl~~~~~~~ 95 (190)
T PRK11071 49 ELLESLVLEH---GGDPLGLVGSSLGGYYATWLSQCFM------------LP-AVVVNPAVRP 95 (190)
T ss_pred HHHHHHHHHc---CCCCeEEEEECHHHHHHHHHHHHcC------------CC-EEEECCCCCH
Confidence 3444444432 3358999999999999888887521 12 3567787775
No 88
>PLN02454 triacylglycerol lipase
Probab=91.16 E-value=0.53 Score=47.20 Aligned_cols=68 Identities=12% Similarity=0.114 Sum_probs=51.8
Q ss_pred hhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhcccccCCeeeeceeEecCCccCc
Q 018994 147 FKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTDM 217 (348)
Q Consensus 147 ~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inlkGi~igng~~d~ 217 (348)
..+.+++...|+...+++|..+. .++|+|||-||-.+-..|..|.+.... ...++++.+..|.|-+..
T Consensus 206 ~S~r~qvl~~V~~l~~~Yp~~~~-sI~vTGHSLGGALAtLaA~di~~~g~~--~~~~~V~~~TFGsPRVGN 273 (414)
T PLN02454 206 LSARSQLLAKIKELLERYKDEKL-SIVLTGHSLGASLATLAAFDIVENGVS--GADIPVTAIVFGSPQVGN 273 (414)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCc-eEEEEecCHHHHHHHHHHHHHHHhccc--ccCCceEEEEeCCCcccC
Confidence 35677899999999998887643 699999999999998888888764211 123567778888887754
No 89
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=90.95 E-value=0.44 Score=39.48 Aligned_cols=62 Identities=16% Similarity=0.321 Sum_probs=45.7
Q ss_pred hhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhcccccCCeeeeceeEecCCcc
Q 018994 148 KQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRT 215 (348)
Q Consensus 148 ~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inlkGi~igng~~ 215 (348)
...+.+.+.|+++.+++|. ..+.|+|||-||-.+..++..+.++... ...+++-+..|.|-+
T Consensus 45 ~~~~~~~~~l~~~~~~~~~---~~i~itGHSLGGalA~l~a~~l~~~~~~---~~~~~~~~~fg~P~~ 106 (140)
T PF01764_consen 45 SLYDQILDALKELVEKYPD---YSIVITGHSLGGALASLAAADLASHGPS---SSSNVKCYTFGAPRV 106 (140)
T ss_dssp HHHHHHHHHHHHHHHHSTT---SEEEEEEETHHHHHHHHHHHHHHHCTTT---STTTEEEEEES-S--
T ss_pred HHHHHHHHHHHHHHhcccC---ccchhhccchHHHHHHHHHHhhhhcccc---cccceeeeecCCccc
Confidence 4556777888888888884 4899999999999999999999876432 135577777777766
No 90
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=90.18 E-value=0.39 Score=43.33 Aligned_cols=76 Identities=16% Similarity=0.116 Sum_probs=43.3
Q ss_pred hhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhcccccCCeeeeceeEecCCccCcccccc-----
Q 018994 148 KQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTDMVVEQN----- 222 (348)
Q Consensus 148 ~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inlkGi~igng~~d~~~~~~----- 222 (348)
+.++.+.++|....+.. ...++++|.|-|-||...-.++.+-. -.|.|++.-+|++-...+..
T Consensus 85 ~s~~~l~~li~~~~~~~--i~~~ri~l~GFSQGa~~al~~~l~~p----------~~~~gvv~lsG~~~~~~~~~~~~~~ 152 (216)
T PF02230_consen 85 ESAERLDELIDEEVAYG--IDPSRIFLGGFSQGAAMALYLALRYP----------EPLAGVVALSGYLPPESELEDRPEA 152 (216)
T ss_dssp HHHHHHHHHHHHHHHTT----GGGEEEEEETHHHHHHHHHHHCTS----------STSSEEEEES---TTGCCCHCCHCC
T ss_pred HHHHHHHHHHHHHHHcC--CChhheehhhhhhHHHHHHHHHHHcC----------cCcCEEEEeeccccccccccccccc
Confidence 34455556666554432 55668999999999988777765322 24889999999875433221
Q ss_pred -ccccccccCCCCC
Q 018994 223 -SQIPFAHGMGLIS 235 (348)
Q Consensus 223 -~~~~~~~~~gli~ 235 (348)
...+....||--|
T Consensus 153 ~~~~pi~~~hG~~D 166 (216)
T PF02230_consen 153 LAKTPILIIHGDED 166 (216)
T ss_dssp CCTS-EEEEEETT-
T ss_pred cCCCcEEEEecCCC
Confidence 1235566666543
No 91
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=90.18 E-value=1.9 Score=41.00 Aligned_cols=46 Identities=24% Similarity=0.198 Sum_probs=38.2
Q ss_pred CCCCeEEEeecccCccHHHHHHHHHhhcccccCCeeeeceeEecCCccCccc
Q 018994 168 ISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTDMVV 219 (348)
Q Consensus 168 ~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inlkGi~igng~~d~~~ 219 (348)
..+++.|+|+|=||+-+..++....+.. ....++.++..|++|...
T Consensus 150 dp~~i~v~GdSAGG~La~~~a~~~~~~~------~~~p~~~~li~P~~d~~~ 195 (312)
T COG0657 150 DPSRIAVAGDSAGGHLALALALAARDRG------LPLPAAQVLISPLLDLTS 195 (312)
T ss_pred CccceEEEecCcccHHHHHHHHHHHhcC------CCCceEEEEEecccCCcc
Confidence 3568999999999999999999887752 245888999999999875
No 92
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=89.89 E-value=0.64 Score=39.50 Aligned_cols=59 Identities=19% Similarity=0.238 Sum_probs=40.0
Q ss_pred hHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhcccccCCeeeeceeEecCCcc
Q 018994 149 QVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRT 215 (348)
Q Consensus 149 ~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inlkGi~igng~~ 215 (348)
.++.+...+++...++|.+ +++|+|+|-||..+-.+|..+.++.. .-..+-+..|.|-+
T Consensus 10 ~~~~i~~~~~~~~~~~p~~---~i~v~GHSlGg~lA~l~a~~~~~~~~-----~~~~~~~~fg~p~~ 68 (153)
T cd00741 10 LANLVLPLLKSALAQYPDY---KIHVTGHSLGGALAGLAGLDLRGRGL-----GRLVRVYTFGPPRV 68 (153)
T ss_pred HHHHHHHHHHHHHHHCCCC---eEEEEEcCHHHHHHHHHHHHHHhccC-----CCceEEEEeCCCcc
Confidence 4455556666666666765 89999999999999999998876531 12244455555544
No 93
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=89.76 E-value=0.69 Score=42.11 Aligned_cols=60 Identities=22% Similarity=0.347 Sum_probs=44.9
Q ss_pred hHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhcccccCCeeeeceeEecCCccC
Q 018994 149 QVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTD 216 (348)
Q Consensus 149 ~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inlkGi~igng~~d 216 (348)
..+++...+++..+++|.+ +++++|||-||-.+-.+|..+.++. ...+++.+..|.|.+.
T Consensus 110 ~~~~~~~~~~~~~~~~p~~---~i~vtGHSLGGaiA~l~a~~l~~~~-----~~~~i~~~tFg~P~vg 169 (229)
T cd00519 110 LYNQVLPELKSALKQYPDY---KIIVTGHSLGGALASLLALDLRLRG-----PGSDVTVYTFGQPRVG 169 (229)
T ss_pred HHHHHHHHHHHHHhhCCCc---eEEEEccCHHHHHHHHHHHHHHhhC-----CCCceEEEEeCCCCCC
Confidence 3345556666666777765 8999999999999998888887653 1345888888888774
No 94
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=89.40 E-value=1.6 Score=44.46 Aligned_cols=36 Identities=14% Similarity=0.133 Sum_probs=23.2
Q ss_pred HHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHH
Q 018994 153 LDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQ 189 (348)
Q Consensus 153 ~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~ 189 (348)
.++++++-...|. -..+++.|+|+|.||+-+-.++.
T Consensus 160 al~wv~~~i~~fg-gd~~~v~~~G~SaG~~~~~~~~~ 195 (493)
T cd00312 160 ALKWVQDNIAAFG-GDPDSVTIFGESAGGASVSLLLL 195 (493)
T ss_pred HHHHHHHHHHHhC-CCcceEEEEeecHHHHHhhhHhh
Confidence 4455555444443 24568999999999986654443
No 95
>COG4099 Predicted peptidase [General function prediction only]
Probab=89.18 E-value=6.2 Score=38.13 Aligned_cols=53 Identities=17% Similarity=0.108 Sum_probs=35.3
Q ss_pred HHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhcccccCCeeeeceeEecCCccC
Q 018994 154 DQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTD 216 (348)
Q Consensus 154 ~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inlkGi~igng~~d 216 (348)
.+.+.+=+..++.-..+.+|++|-|-||.-.=+++.+..+- +.+.+...|--|
T Consensus 253 idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdf----------FAaa~~iaG~~d 305 (387)
T COG4099 253 IDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDF----------FAAAVPIAGGGD 305 (387)
T ss_pred HHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchh----------hheeeeecCCCc
Confidence 34444445567777788999999999998766666654432 556665555544
No 96
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=87.05 E-value=1.2 Score=48.34 Aligned_cols=85 Identities=19% Similarity=0.332 Sum_probs=55.6
Q ss_pred CCCceEEEeCCCcccccccccCCCCCcCchhhHHHHHHHHHHHHhhCC--------------CCCCCCeEEEeecccCcc
Q 018994 118 KEASILFVDSPVGTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHP--------------EFISNPFYVGGDSYSGIT 183 (348)
Q Consensus 118 ~~anllfiD~PvG~GfSy~~~~~~~~~~d~~~a~~~~~fL~~f~~~~p--------------~~~~~~~yi~GESYgG~y 183 (348)
+=..+|++| ..|+|-|-+... ....+..+|..+.|+ |+.... .|.+-++-++|.||+|..
T Consensus 278 rGYaVV~~D-~RGtg~SeG~~~----~~~~~E~~D~~~vIe-Wl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G~~ 351 (767)
T PRK05371 278 RGFAVVYVS-GIGTRGSDGCPT----TGDYQEIESMKAVID-WLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLGTL 351 (767)
T ss_pred CCeEEEEEc-CCCCCCCCCcCc----cCCHHHHHHHHHHHH-HHhhCCccccccccccccccCCCCCeeEEEEEcHHHHH
Confidence 346899999 469999876422 222344555655553 776432 233458999999999987
Q ss_pred HHHHHHHHHhhcccccCCeeeeceeEecCCccCcc
Q 018994 184 VPALVQRISNENEEDIKPLINLQGYILGNPRTDMV 218 (348)
Q Consensus 184 vp~la~~i~~~~~~~~~~~inlkGi~igng~~d~~ 218 (348)
.-.+|..-. -.||.|+-..|+.+..
T Consensus 352 ~~~aAa~~p----------p~LkAIVp~a~is~~y 376 (767)
T PRK05371 352 PNAVATTGV----------EGLETIIPEAAISSWY 376 (767)
T ss_pred HHHHHhhCC----------CcceEEEeeCCCCcHH
Confidence 776665311 2499999888877643
No 97
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=86.52 E-value=1.1 Score=41.37 Aligned_cols=66 Identities=18% Similarity=0.197 Sum_probs=43.2
Q ss_pred hHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhcccccCCeeeeceeEecCCccCcc
Q 018994 149 QVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTDMV 218 (348)
Q Consensus 149 ~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inlkGi~igng~~d~~ 218 (348)
.+..+.+||+...+. + ...+++|.+||.|+..+-.....+...... ....-.|..|++.+|.+|..
T Consensus 75 s~~~l~~~L~~L~~~-~--~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~-~~~~~~~~~viL~ApDid~d 140 (233)
T PF05990_consen 75 SGPALARFLRDLARA-P--GIKRIHILAHSMGNRVLLEALRQLASEGER-PDVKARFDNVILAAPDIDND 140 (233)
T ss_pred HHHHHHHHHHHHHhc-c--CCceEEEEEeCchHHHHHHHHHHHHhcccc-hhhHhhhheEEEECCCCCHH
Confidence 344455555443332 1 345899999999999888877777665421 01123688999999998864
No 98
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=85.88 E-value=1.3 Score=39.87 Aligned_cols=65 Identities=14% Similarity=0.207 Sum_probs=52.6
Q ss_pred cCchhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhcccccCCeeeeceeEecCCccCc
Q 018994 144 TGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTDM 217 (348)
Q Consensus 144 ~~d~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inlkGi~igng~~d~ 217 (348)
.+.+++|.|+...++.+.++ ++.+.+.|+|-|+|.-.+|.+..++....+ =.++++++..+....
T Consensus 45 rtP~~~a~Dl~~~i~~y~~~---w~~~~vvLiGYSFGADvlP~~~nrLp~~~r------~~v~~v~Ll~p~~~~ 109 (192)
T PF06057_consen 45 RTPEQTAADLARIIRHYRAR---WGRKRVVLIGYSFGADVLPFIYNRLPAALR------ARVAQVVLLSPSTTA 109 (192)
T ss_pred CCHHHHHHHHHHHHHHHHHH---hCCceEEEEeecCCchhHHHHHhhCCHHHH------hheeEEEEeccCCcc
Confidence 46788999999999988874 566799999999999999999999977643 247888887765543
No 99
>PLN02571 triacylglycerol lipase
Probab=85.37 E-value=2.3 Score=42.73 Aligned_cols=69 Identities=7% Similarity=0.042 Sum_probs=49.8
Q ss_pred hhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhccc----ccCCeeeeceeEecCCccCc
Q 018994 148 KQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEE----DIKPLINLQGYILGNPRTDM 217 (348)
Q Consensus 148 ~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~----~~~~~inlkGi~igng~~d~ 217 (348)
.+.+++...|+.+.+++|... .+++|+|||-||-.+-..|..|....-. .....+++..+..|.|-+..
T Consensus 205 Sar~qvl~eV~~L~~~y~~e~-~sI~VTGHSLGGALAtLaA~dl~~~g~n~~~~~~~~~~~V~v~TFGsPRVGN 277 (413)
T PLN02571 205 SARDQVLNEVGRLVEKYKDEE-ISITICGHSLGAALATLNAVDIVANGFNRSKSRPNKSCPVTAFVFASPRVGD 277 (413)
T ss_pred hHHHHHHHHHHHHHHhcCccc-ccEEEeccchHHHHHHHHHHHHHHhcccccccccccCcceEEEEeCCCCccC
Confidence 455778888998888888752 3799999999999998888888653110 11123567778888887753
No 100
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=84.99 E-value=4.4 Score=46.17 Aligned_cols=103 Identities=16% Similarity=0.110 Sum_probs=64.1
Q ss_pred CCeEEEecCCCCcccccccchhcCceEEccCCCCCCCCeeeccCCCCCCCCceEEEeCCCcccccccccCCCCCcCchhh
Q 018994 70 DPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEASILFVDSPVGTGFSYARTPHASQTGDFKQ 149 (348)
Q Consensus 70 ~PlvlwlnGGPG~SS~~g~~~e~GP~~~~~~~~~g~~~~l~~n~~sW~~~anllfiD~PvG~GfSy~~~~~~~~~~d~~~ 149 (348)
.|.++.++|+.|.+..+..+.+ .......++-+|.| |.|-+. . ...+.++.
T Consensus 1068 ~~~l~~lh~~~g~~~~~~~l~~-----------------------~l~~~~~v~~~~~~-g~~~~~---~--~~~~l~~l 1118 (1296)
T PRK10252 1068 GPTLFCFHPASGFAWQFSVLSR-----------------------YLDPQWSIYGIQSP-RPDGPM---Q--TATSLDEV 1118 (1296)
T ss_pred CCCeEEecCCCCchHHHHHHHH-----------------------hcCCCCcEEEEECC-CCCCCC---C--CCCCHHHH
Confidence 3667888998887665433321 01123566778877 565331 1 12355667
Q ss_pred HHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhcccccCCeeeeceeEecCCc
Q 018994 150 VHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPR 214 (348)
Q Consensus 150 a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inlkGi~igng~ 214 (348)
|++....++. ..+ ..++.++|+|+||..+-.+|.++.++. ..+..+++.++.
T Consensus 1119 a~~~~~~i~~---~~~---~~p~~l~G~S~Gg~vA~e~A~~l~~~~-------~~v~~l~l~~~~ 1170 (1296)
T PRK10252 1119 CEAHLATLLE---QQP---HGPYHLLGYSLGGTLAQGIAARLRARG-------EEVAFLGLLDTW 1170 (1296)
T ss_pred HHHHHHHHHh---hCC---CCCEEEEEechhhHHHHHHHHHHHHcC-------CceeEEEEecCC
Confidence 7777766654 222 248999999999999999998886642 235566555543
No 101
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=84.74 E-value=1.7 Score=43.37 Aligned_cols=62 Identities=18% Similarity=0.043 Sum_probs=47.4
Q ss_pred hhhHHHHHHHHHHHHhhCCCCCC-CCeEEEeecccCccHHHHHHHHHhhcccccCCeeeeceeEecCCccCcc
Q 018994 147 FKQVHHLDQFLRKWLMDHPEFIS-NPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTDMV 218 (348)
Q Consensus 147 ~~~a~~~~~fL~~f~~~~p~~~~-~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inlkGi~igng~~d~~ 218 (348)
--+|-|+..+|..-..++|.... .|+.+.|.|||| |+..|+.+|. +..+.||+=-+++.-|.
T Consensus 160 IMqAiD~INAl~~l~k~~~~~~~~lp~I~~G~s~G~-yla~l~~k~a---------P~~~~~~iDns~~~~p~ 222 (403)
T PF11144_consen 160 IMQAIDIINALLDLKKIFPKNGGGLPKIYIGSSHGG-YLAHLCAKIA---------PWLFDGVIDNSSYALPP 222 (403)
T ss_pred HHHHHHHHHHHHHHHHhhhcccCCCcEEEEecCcHH-HHHHHHHhhC---------ccceeEEEecCccccch
Confidence 35788999999888889999985 799999999987 6677777664 34467777666666653
No 102
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=84.32 E-value=1.7 Score=39.58 Aligned_cols=62 Identities=16% Similarity=0.300 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhcccccCCeeeeceeEecCCccC
Q 018994 150 VHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTD 216 (348)
Q Consensus 150 a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inlkGi~igng~~d 216 (348)
-.|...+.+.|++++++ +|||.|+|||-|+..+-.|-++-.+.+...++ =+-.++||-+.+.
T Consensus 77 y~DV~~AF~~yL~~~n~--GRPfILaGHSQGs~~l~~LL~e~~~~~pl~~r---LVAAYliG~~v~~ 138 (207)
T PF11288_consen 77 YSDVRAAFDYYLANYNN--GRPFILAGHSQGSMHLLRLLKEEIAGDPLRKR---LVAAYLIGYPVTV 138 (207)
T ss_pred HHHHHHHHHHHHHhcCC--CCCEEEEEeChHHHHHHHHHHHHhcCchHHhh---hheeeecCccccH
Confidence 46778888889988765 57999999999998877776665443321001 1445666655443
No 103
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=83.35 E-value=1.5 Score=39.31 Aligned_cols=41 Identities=22% Similarity=0.212 Sum_probs=32.1
Q ss_pred CCCCeEEEeecccCccHHHHHHHHHhhcccccCCeeeeceeEecCCccCccccc
Q 018994 168 ISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTDMVVEQ 221 (348)
Q Consensus 168 ~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inlkGi~igng~~d~~~~~ 221 (348)
....+.|+|-|-||.|+-.+|.+. +++. ++.||.+.|....
T Consensus 57 ~~~~~~liGSSlGG~~A~~La~~~------------~~~a-vLiNPav~p~~~l 97 (187)
T PF05728_consen 57 KPENVVLIGSSLGGFYATYLAERY------------GLPA-VLINPAVRPYELL 97 (187)
T ss_pred CCCCeEEEEEChHHHHHHHHHHHh------------CCCE-EEEcCCCCHHHHH
Confidence 334599999999999999998754 3555 7789999987543
No 104
>COG0400 Predicted esterase [General function prediction only]
Probab=82.58 E-value=5.4 Score=36.33 Aligned_cols=79 Identities=16% Similarity=0.021 Sum_probs=52.8
Q ss_pred chhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhcccccCCeeeeceeEecCCccCcccc---cc
Q 018994 146 DFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTDMVVE---QN 222 (348)
Q Consensus 146 d~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inlkGi~igng~~d~~~~---~~ 222 (348)
....+..+.+||....+++.- ..+++++.|-|-|+.++-.+..... -.++|+++-.|..-+..+ ..
T Consensus 76 l~~~~~~~~~~l~~~~~~~gi-~~~~ii~~GfSqGA~ial~~~l~~~----------~~~~~ail~~g~~~~~~~~~~~~ 144 (207)
T COG0400 76 LDLETEKLAEFLEELAEEYGI-DSSRIILIGFSQGANIALSLGLTLP----------GLFAGAILFSGMLPLEPELLPDL 144 (207)
T ss_pred HHHHHHHHHHHHHHHHHHhCC-ChhheEEEecChHHHHHHHHHHhCc----------hhhccchhcCCcCCCCCcccccc
Confidence 344567788888888776543 4569999999999987766655322 248888888887755432 23
Q ss_pred ccccccccCCCCC
Q 018994 223 SQIPFAHGMGLIS 235 (348)
Q Consensus 223 ~~~~~~~~~gli~ 235 (348)
...+....||--|
T Consensus 145 ~~~pill~hG~~D 157 (207)
T COG0400 145 AGTPILLSHGTED 157 (207)
T ss_pred CCCeEEEeccCcC
Confidence 4455556666544
No 105
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=82.39 E-value=4.5 Score=37.28 Aligned_cols=87 Identities=20% Similarity=0.251 Sum_probs=56.6
Q ss_pred ceEEEeCCCcccccccccCCCCCcCchhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhcccccC
Q 018994 121 SILFVDSPVGTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIK 200 (348)
Q Consensus 121 nllfiD~PvG~GfSy~~~~~~~~~~d~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~ 200 (348)
+...|+-|.+.+-=-......+..+..+-++.+...|+.+.. ..+++.|+|.|-|+..+-...+++.+.....
T Consensus 4 ~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~-----~~~~vvV~GySQGA~Va~~~~~~l~~~~~~~-- 76 (225)
T PF08237_consen 4 NVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIA-----AGGPVVVFGYSQGAVVASNVLRRLAADGDPP-- 76 (225)
T ss_pred ceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhcc-----CCCCEEEEEECHHHHHHHHHHHHHHhcCCCC--
Confidence 445566666433211111112344556667778888876555 5679999999999999988888888743211
Q ss_pred CeeeeceeEecCCcc
Q 018994 201 PLINLQGYILGNPRT 215 (348)
Q Consensus 201 ~~inlkGi~igng~~ 215 (348)
.=+++-+++|||.-
T Consensus 77 -~~~l~fVl~gnP~r 90 (225)
T PF08237_consen 77 -PDDLSFVLIGNPRR 90 (225)
T ss_pred -cCceEEEEecCCCC
Confidence 13588999999853
No 106
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=81.49 E-value=2.6 Score=42.38 Aligned_cols=90 Identities=16% Similarity=0.108 Sum_probs=53.1
Q ss_pred CCceEEEeCCCcccccccccCC-----CCCcCchhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHh
Q 018994 119 EASILFVDSPVGTGFSYARTPH-----ASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISN 193 (348)
Q Consensus 119 ~anllfiD~PvG~GfSy~~~~~-----~~~~~d~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~ 193 (348)
.|-|+++|. .=.|-|...... .| -+.+|+-+|+..|++.+-.++....+.|+.++|-||||..+.-+-.+-.+
T Consensus 59 ~a~~v~lEH-RyYG~S~P~~~~s~~nL~y-Lt~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~ 136 (434)
T PF05577_consen 59 GALVVALEH-RYYGKSQPFGDLSTENLRY-LTSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYPH 136 (434)
T ss_dssp TEEEEEE---TTSTTB-TTGGGGGSTTTC--SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-TT
T ss_pred CCcEEEeeh-hhhcCCCCccccchhhHHh-cCHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCCC
Confidence 356777874 567777643211 12 35668889999999987777766677799999999999766555544332
Q ss_pred hcccccCCeeeeceeEecCCccCcccc
Q 018994 194 ENEEDIKPLINLQGYILGNPRTDMVVE 220 (348)
Q Consensus 194 ~~~~~~~~~inlkGi~igng~~d~~~~ 220 (348)
- +.|.+--++.+....+
T Consensus 137 ~----------~~ga~ASSapv~a~~d 153 (434)
T PF05577_consen 137 L----------FDGAWASSAPVQAKVD 153 (434)
T ss_dssp T-----------SEEEEET--CCHCCT
T ss_pred e----------eEEEEeccceeeeecc
Confidence 1 5565555555554443
No 107
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=80.60 E-value=3.9 Score=44.53 Aligned_cols=46 Identities=11% Similarity=-0.020 Sum_probs=30.9
Q ss_pred CchhhHHHHHHHHHHHH------h---hCCCCCCCCeEEEeecccCccHHHHHHH
Q 018994 145 GDFKQVHHLDQFLRKWL------M---DHPEFISNPFYVGGDSYSGITVPALVQR 190 (348)
Q Consensus 145 ~d~~~a~~~~~fL~~f~------~---~~p~~~~~~~yi~GESYgG~yvp~la~~ 190 (348)
+-.+.+.|++......= . .+..+...++++.|||.||.....++..
T Consensus 521 n~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 521 NLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred CHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 44666677665444321 1 1233556799999999999999888853
No 108
>PLN02753 triacylglycerol lipase
Probab=80.46 E-value=4.2 Score=41.99 Aligned_cols=72 Identities=15% Similarity=0.183 Sum_probs=50.7
Q ss_pred chhhHHHHHHHHHHHHhhCCC--CCCCCeEEEeecccCccHHHHHHHHHhhc--ccccCCeeeeceeEecCCccCc
Q 018994 146 DFKQVHHLDQFLRKWLMDHPE--FISNPFYVGGDSYSGITVPALVQRISNEN--EEDIKPLINLQGYILGNPRTDM 217 (348)
Q Consensus 146 d~~~a~~~~~fL~~f~~~~p~--~~~~~~yi~GESYgG~yvp~la~~i~~~~--~~~~~~~inlkGi~igng~~d~ 217 (348)
...+.+++...|+...+++|. ...-.++|+|||-||-.+-..|..|.+.. .......+++.-+..|.|-+..
T Consensus 286 k~S~reQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~Dla~~g~n~~~~~~~~pV~vyTFGsPRVGN 361 (531)
T PLN02753 286 KFSAREQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYDIAEMGLNRSKKGKVIPVTVLTYGGPRVGN 361 (531)
T ss_pred hhhHHHHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHHHHHhcccccccCccCceEEEEeCCCCccC
Confidence 345678889999998888763 22348999999999999999988887631 1111123556777777776643
No 109
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=79.87 E-value=12 Score=35.38 Aligned_cols=60 Identities=17% Similarity=0.096 Sum_probs=44.0
Q ss_pred cCchhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhcccccCCeeeeceeEecCCccC
Q 018994 144 TGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTD 216 (348)
Q Consensus 144 ~~d~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inlkGi~igng~~d 216 (348)
.+.++.|+.-.+.|+ +..|+- |.+|.|.|+||.-+=.+|.++..+-+. +.=++|.+....
T Consensus 45 ~~l~~~a~~yv~~Ir---~~QP~G---Py~L~G~S~GG~vA~evA~qL~~~G~~-------Va~L~llD~~~~ 104 (257)
T COG3319 45 ASLDDMAAAYVAAIR---RVQPEG---PYVLLGWSLGGAVAFEVAAQLEAQGEE-------VAFLGLLDAVPP 104 (257)
T ss_pred CCHHHHHHHHHHHHH---HhCCCC---CEEEEeeccccHHHHHHHHHHHhCCCe-------EEEEEEeccCCC
Confidence 355666776767776 477875 999999999999999999999876421 455555555544
No 110
>PRK13604 luxD acyl transferase; Provisional
Probab=78.74 E-value=16 Score=35.30 Aligned_cols=124 Identities=15% Similarity=0.086 Sum_probs=70.0
Q ss_pred CeeEEEEEEecC-CCCCCCCeEEEecCCCCcccccccchhcCceEEccCCCCCCCCeeeccCCCCCCCCceEEEeCCCcc
Q 018994 53 EAQLFYYFVKSD-KNPKEDPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEASILFVDSPVGT 131 (348)
Q Consensus 53 ~~~lfy~f~es~-~~p~~~PlvlwlnGGPG~SS~~g~~~e~GP~~~~~~~~~g~~~~l~~n~~sW~~~anllfiD~PvG~ 131 (348)
|..|.=|+...+ .++...|+||..+ |.|+... .+. ..-.+=+.+=.++|-.|.=-|.
T Consensus 19 G~~L~Gwl~~P~~~~~~~~~~vIi~H-Gf~~~~~--~~~-------------------~~A~~La~~G~~vLrfD~rg~~ 76 (307)
T PRK13604 19 GQSIRVWETLPKENSPKKNNTILIAS-GFARRMD--HFA-------------------GLAEYLSSNGFHVIRYDSLHHV 76 (307)
T ss_pred CCEEEEEEEcCcccCCCCCCEEEEeC-CCCCChH--HHH-------------------HHHHHHHHCCCEEEEecCCCCC
Confidence 678888887765 3456678888766 4455421 011 0011223344678888854346
Q ss_pred cccccccCCCCCcCchhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhcccccCCeeeeceeEec
Q 018994 132 GFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILG 211 (348)
Q Consensus 132 GfSy~~~~~~~~~~d~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inlkGi~ig 211 (348)
|-|-+.-. +...+. ...|+..++ +|+++. ...+++|.|+|.||..+...|. ..+++++++.
T Consensus 77 GeS~G~~~-~~t~s~--g~~Dl~aai-d~lk~~---~~~~I~LiG~SmGgava~~~A~------------~~~v~~lI~~ 137 (307)
T PRK13604 77 GLSSGTID-EFTMSI--GKNSLLTVV-DWLNTR---GINNLGLIAASLSARIAYEVIN------------EIDLSFLITA 137 (307)
T ss_pred CCCCCccc-cCcccc--cHHHHHHHH-HHHHhc---CCCceEEEEECHHHHHHHHHhc------------CCCCCEEEEc
Confidence 87733221 122122 134443333 455443 2347999999999987533332 1248889999
Q ss_pred CCccCc
Q 018994 212 NPRTDM 217 (348)
Q Consensus 212 ng~~d~ 217 (348)
.|..+.
T Consensus 138 sp~~~l 143 (307)
T PRK13604 138 VGVVNL 143 (307)
T ss_pred CCcccH
Confidence 999883
No 111
>PRK04940 hypothetical protein; Provisional
Probab=78.38 E-value=4.9 Score=35.86 Aligned_cols=59 Identities=14% Similarity=0.005 Sum_probs=38.3
Q ss_pred chhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhcccccCCeeeeceeEecCCccCcccc
Q 018994 146 DFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTDMVVE 220 (348)
Q Consensus 146 d~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inlkGi~igng~~d~~~~ 220 (348)
..++.+.+.+.+.++... .. ..++.|+|-|-||.|+-.||.+- .++.| +.||.+.|...
T Consensus 39 P~~a~~~l~~~i~~~~~~--~~-~~~~~liGSSLGGyyA~~La~~~------------g~~aV-LiNPAv~P~~~ 97 (180)
T PRK04940 39 PKHDMQHLLKEVDKMLQL--SD-DERPLICGVGLGGYWAERIGFLC------------GIRQV-IFNPNLFPEEN 97 (180)
T ss_pred HHHHHHHHHHHHHHhhhc--cC-CCCcEEEEeChHHHHHHHHHHHH------------CCCEE-EECCCCChHHH
Confidence 334444455555443321 11 23789999999999999999853 35554 56999999654
No 112
>PLN02719 triacylglycerol lipase
Probab=78.25 E-value=5.4 Score=41.11 Aligned_cols=71 Identities=13% Similarity=0.144 Sum_probs=50.2
Q ss_pred hhhHHHHHHHHHHHHhhCCCCC--CCCeEEEeecccCccHHHHHHHHHhhcc--cccCCeeeeceeEecCCccCc
Q 018994 147 FKQVHHLDQFLRKWLMDHPEFI--SNPFYVGGDSYSGITVPALVQRISNENE--EDIKPLINLQGYILGNPRTDM 217 (348)
Q Consensus 147 ~~~a~~~~~fL~~f~~~~p~~~--~~~~yi~GESYgG~yvp~la~~i~~~~~--~~~~~~inlkGi~igng~~d~ 217 (348)
..+.+++...|++..+++|... ...++|+|||-||-.+-..|..|.+..- ......+++.-+..|.|-+..
T Consensus 273 ~SaReQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~Dl~~~gln~~~~~~~~pVtvyTFGsPRVGN 347 (518)
T PLN02719 273 FSAREQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYDVAEMGLNRTRKGKVIPVTAFTYGGPRVGN 347 (518)
T ss_pred hhHHHHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHHHHHhcccccccccccceEEEEecCCCccC
Confidence 3566788899999888888642 3379999999999999999988876421 111123456667777776643
No 113
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=77.40 E-value=5.2 Score=40.65 Aligned_cols=41 Identities=12% Similarity=0.109 Sum_probs=31.3
Q ss_pred hhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHH
Q 018994 147 FKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQR 190 (348)
Q Consensus 147 ~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~ 190 (348)
++..+++.+.++..++..+ .+++.|+|||.||..+-.++..
T Consensus 142 ~~~~~~Lk~lIe~~~~~~g---~~kV~LVGHSMGGlva~~fl~~ 182 (440)
T PLN02733 142 PETMDGLKKKLETVYKASG---GKKVNIISHSMGGLLVKCFMSL 182 (440)
T ss_pred HHHHHHHHHHHHHHHHHcC---CCCEEEEEECHhHHHHHHHHHH
Confidence 3456778888888887644 3599999999999887766653
No 114
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=77.07 E-value=20 Score=34.30 Aligned_cols=104 Identities=20% Similarity=0.209 Sum_probs=61.2
Q ss_pred CCCCCCeEEEecCCCCcccccccchhcCceEEccCCCCCCCCeeeccCCCCCCCCc--eEEEeCCCcccccccccCCCCC
Q 018994 66 NPKEDPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEAS--ILFVDSPVGTGFSYARTPHASQ 143 (348)
Q Consensus 66 ~p~~~PlvlwlnGGPG~SS~~g~~~e~GP~~~~~~~~~g~~~~l~~n~~sW~~~an--llfiD~PvG~GfSy~~~~~~~~ 143 (348)
..+...+|+=++|-||+--= |--+ -++...++ ++=|.-| |-||+-......|
T Consensus 31 ~gs~~gTVv~~hGsPGSH~D---FkYi---------------------~~~l~~~~iR~I~iN~P-Gf~~t~~~~~~~~- 84 (297)
T PF06342_consen 31 SGSPLGTVVAFHGSPGSHND---FKYI---------------------RPPLDEAGIRFIGINYP-GFGFTPGYPDQQY- 84 (297)
T ss_pred CCCCceeEEEecCCCCCccc---hhhh---------------------hhHHHHcCeEEEEeCCC-CCCCCCCCccccc-
Confidence 34455689999999997311 0000 11222233 3445567 7777754332222
Q ss_pred cCchhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhcccccCCeeeeceeEecCCc
Q 018994 144 TGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPR 214 (348)
Q Consensus 144 ~~d~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inlkGi~igng~ 214 (348)
++. +-..|...++++- +.+ ..+.+.|+|-|+--+-.+|... .+.|+++.||.
T Consensus 85 ~n~-----er~~~~~~ll~~l-~i~-~~~i~~gHSrGcenal~la~~~------------~~~g~~lin~~ 136 (297)
T PF06342_consen 85 TNE-----ERQNFVNALLDEL-GIK-GKLIFLGHSRGCENALQLAVTH------------PLHGLVLINPP 136 (297)
T ss_pred ChH-----HHHHHHHHHHHHc-CCC-CceEEEEeccchHHHHHHHhcC------------ccceEEEecCC
Confidence 222 2335566666542 233 4788889999999888887743 37799999985
No 115
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=76.24 E-value=13 Score=31.83 Aligned_cols=76 Identities=17% Similarity=0.211 Sum_probs=46.5
Q ss_pred CCceEEEeCCCcccccccccCCCCCcCchhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhcccc
Q 018994 119 EASILFVDSPVGTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEED 198 (348)
Q Consensus 119 ~anllfiD~PvG~GfSy~~~~~~~~~~d~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~ 198 (348)
..+++.+|.| |.|.+-. ...+.+..++.....++. ..+ ..++.++|+|.||..+-.++..+.++.
T Consensus 25 ~~~v~~~~~~-g~~~~~~-----~~~~~~~~~~~~~~~l~~---~~~---~~~~~l~g~s~Gg~~a~~~a~~l~~~~--- 89 (212)
T smart00824 25 RRDVSALPLP-GFGPGEP-----LPASADALVEAQAEAVLR---AAG---GRPFVLVGHSSGGLLAHAVAARLEARG--- 89 (212)
T ss_pred CccEEEecCC-CCCCCCC-----CCCCHHHHHHHHHHHHHH---hcC---CCCeEEEEECHHHHHHHHHHHHHHhCC---
Confidence 4578888865 6654321 112333444444444442 233 348999999999999999999887642
Q ss_pred cCCeeeeceeEecCC
Q 018994 199 IKPLINLQGYILGNP 213 (348)
Q Consensus 199 ~~~~inlkGi~igng 213 (348)
..++++++.+.
T Consensus 90 ----~~~~~l~~~~~ 100 (212)
T smart00824 90 ----IPPAAVVLLDT 100 (212)
T ss_pred ----CCCcEEEEEcc
Confidence 23566665544
No 116
>PLN02324 triacylglycerol lipase
Probab=75.48 E-value=7.8 Score=39.02 Aligned_cols=70 Identities=11% Similarity=0.086 Sum_probs=48.3
Q ss_pred hhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhccc-----ccCCeeeeceeEecCCccCc
Q 018994 147 FKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEE-----DIKPLINLQGYILGNPRTDM 217 (348)
Q Consensus 147 ~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~-----~~~~~inlkGi~igng~~d~ 217 (348)
..+.+++...|++..+++|... ..++|+|||-||-.+-..|..|.+.... .....+++.-+..|.|-+..
T Consensus 193 ~SareqVl~eV~~L~~~Yp~e~-~sItvTGHSLGGALAtLaA~dl~~~~~n~~~~~~~~~~~~V~v~TFGsPRVGN 267 (415)
T PLN02324 193 TSAQEQVQGELKRLLELYKNEE-ISITFTGHSLGAVMSVLSAADLVYGKKNKINISLQKKQVPITVFAFGSPRIGD 267 (415)
T ss_pred hHHHHHHHHHHHHHHHHCCCCC-ceEEEecCcHHHHHHHHHHHHHHHhcccccccccccCCCceEEEEecCCCcCC
Confidence 3566778888888888887532 3799999999999988888888764211 01123456666677776643
No 117
>PF03283 PAE: Pectinacetylesterase
Probab=74.85 E-value=30 Score=34.24 Aligned_cols=155 Identities=15% Similarity=0.127 Sum_probs=77.3
Q ss_pred eeEEEEEEecCCCCCCCCeEEEecCCCCccccc----ccchhcCceEEccCC--CCCC-CCeeeccCCCCCCCCceEEEe
Q 018994 54 AQLFYYFVKSDKNPKEDPLLLWLTGGPGCSAFS----GLAYEIGPVNFNTVE--YNGS-LPTLRLNPYSWTKEASILFVD 126 (348)
Q Consensus 54 ~~lfy~f~es~~~p~~~PlvlwlnGGPG~SS~~----g~~~e~GP~~~~~~~--~~g~-~~~l~~n~~sW~~~anllfiD 126 (348)
..-.|++.+.. ....+-+||.|.||=-|.+.. -...++|--..-.+. ..|- ...-..||.=|+ .|+|||=
T Consensus 35 S~~~yy~~~g~-g~~s~~~li~leGGG~C~~~~tC~~r~~t~~gss~~~~~~~~~~Gils~~~~~Np~f~~--wN~V~vp 111 (361)
T PF03283_consen 35 SPPGYYFRPGS-GSGSNKWLIFLEGGGWCWDAETCAQRSSTNLGSSKNWPKTFAFSGILSNDPAENPDFYN--WNHVFVP 111 (361)
T ss_pred CCCcEEEccCC-CCCCceEEEEeccchhcCChhHHhhhccCccccccchhhhccccccccCCcccCCcccc--ccEEEEE
Confidence 33445554542 345679999999999998752 222344433211111 0110 012234663332 5778885
Q ss_pred CCCcccccccccCCCCC-cCchhhHHHHHHHHHHHHhhCCCCC-CCCeEEEeecccCccHHHHHHHHHhhcccccCCeee
Q 018994 127 SPVGTGFSYARTPHASQ-TGDFKQVHHLDQFLRKWLMDHPEFI-SNPFYVGGDSYSGITVPALVQRISNENEEDIKPLIN 204 (348)
Q Consensus 127 ~PvG~GfSy~~~~~~~~-~~d~~~a~~~~~fL~~f~~~~p~~~-~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~in 204 (348)
-=.|.-|+=......+. .+..-....+++++.+++... .+. ..++.|+|.|-||.=+..-+.+|.+.-.. ...
T Consensus 112 YC~Gd~~~G~~~~~~~~~~~l~frG~~i~~avl~~l~~~-gl~~a~~vlltG~SAGG~g~~~~~d~~~~~lp~----~~~ 186 (361)
T PF03283_consen 112 YCDGDSHSGDVEPVDYGGTTLYFRGYRILRAVLDDLLSN-GLPNAKQVLLTGCSAGGLGAILHADYVRDRLPS----SVK 186 (361)
T ss_pred ecCCccccCcccccccCCceeEeecHHHHHHHHHHHHHh-cCcccceEEEeccChHHHHHHHHHHHHHHHhcc----Cce
Confidence 43343333211111110 111122344555555555443 232 24799999999998887777777665321 234
Q ss_pred eceeEecCCccC
Q 018994 205 LQGYILGNPRTD 216 (348)
Q Consensus 205 lkGi~igng~~d 216 (348)
++++.=..-++|
T Consensus 187 v~~~~DsG~f~d 198 (361)
T PF03283_consen 187 VKCLSDSGFFLD 198 (361)
T ss_pred EEEecccccccc
Confidence 555544433443
No 118
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=74.76 E-value=5.9 Score=37.81 Aligned_cols=36 Identities=17% Similarity=0.118 Sum_probs=28.7
Q ss_pred hhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCc
Q 018994 147 FKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGI 182 (348)
Q Consensus 147 ~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~ 182 (348)
.+++..+.+.+......-|+=..=++|++|||-|..
T Consensus 86 ~~a~~aL~~aV~~~~~~lP~~~RPkL~l~GeSLGa~ 121 (289)
T PF10081_consen 86 REAARALFEAVYARWSTLPEDRRPKLYLYGESLGAY 121 (289)
T ss_pred HHHHHHHHHHHHHHHHhCCcccCCeEEEeccCcccc
Confidence 466788889998888888886554699999998754
No 119
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=74.42 E-value=5.4 Score=40.06 Aligned_cols=64 Identities=22% Similarity=0.401 Sum_probs=36.4
Q ss_pred CCceEEEe-------CCCcccccccccCC-CCCcCchhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHH
Q 018994 119 EASILFVD-------SPVGTGFSYARTPH-ASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVP 185 (348)
Q Consensus 119 ~anllfiD-------~PvG~GfSy~~~~~-~~~~~d~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp 185 (348)
.|-|||+| +|.|.- ||.+... .|- +.+|+=.|+.+.| .++++...=+..|+..+|-||||+-..
T Consensus 111 ~AllVFaEHRyYGeS~PFG~~-s~k~~~hlgyL-tseQALADfA~ll-~~lK~~~~a~~~pvIafGGSYGGMLaA 182 (492)
T KOG2183|consen 111 KALLVFAEHRYYGESLPFGSQ-SYKDARHLGYL-TSEQALADFAELL-TFLKRDLSAEASPVIAFGGSYGGMLAA 182 (492)
T ss_pred CceEEEeehhccccCCCCcch-hccChhhhccc-cHHHHHHHHHHHH-HHHhhccccccCcEEEecCchhhHHHH
Confidence 35567776 355544 4432211 232 3334445554444 566665444566999999999996543
No 120
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=74.27 E-value=2.3 Score=38.94 Aligned_cols=90 Identities=16% Similarity=0.098 Sum_probs=59.8
Q ss_pred cccccccccCCCCCcCchhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhcccccCCeeeeceeE
Q 018994 130 GTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYI 209 (348)
Q Consensus 130 G~GfSy~~~~~~~~~~d~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inlkGi~ 209 (348)
-|||-+++.. .+.+++..++.++++--|+.+|.-+ .+-+.|+|-|.|-+.+...++.+ -.+.|++
T Consensus 102 svgY~l~~q~----htL~qt~~~~~~gv~filk~~~n~k--~l~~gGHSaGAHLa~qav~R~r~---------prI~gl~ 166 (270)
T KOG4627|consen 102 SVGYNLCPQV----HTLEQTMTQFTHGVNFILKYTENTK--VLTFGGHSAGAHLAAQAVMRQRS---------PRIWGLI 166 (270)
T ss_pred EeccCcCccc----ccHHHHHHHHHHHHHHHHHhcccce--eEEEcccchHHHHHHHHHHHhcC---------chHHHHH
Confidence 4666665442 3566777888888876677777644 59999999999877776666432 2378888
Q ss_pred ecCCccCccccccccccccccCCCCCH
Q 018994 210 LGNPRTDMVVEQNSQIPFAHGMGLISN 236 (348)
Q Consensus 210 igng~~d~~~~~~~~~~~~~~~gli~~ 236 (348)
+-.|+-+-.. -+-.++-...||-++
T Consensus 167 l~~GvY~l~E--L~~te~g~dlgLt~~ 191 (270)
T KOG4627|consen 167 LLCGVYDLRE--LSNTESGNDLGLTER 191 (270)
T ss_pred HHhhHhhHHH--HhCCccccccCcccc
Confidence 8888876432 223344456666554
No 121
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=73.77 E-value=1.2 Score=43.43 Aligned_cols=70 Identities=13% Similarity=0.135 Sum_probs=45.7
Q ss_pred CCceEEEeCCCcccccccccCCCCCcCchhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHh
Q 018994 119 EASILFVDSPVGTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISN 193 (348)
Q Consensus 119 ~anllfiD~PvG~GfSy~~~~~~~~~~d~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~ 193 (348)
-.|||.||.-.+..-.|... ..+...+++.+..||+.....+ .+...+++|+|+|-|+|.+-..++++..
T Consensus 104 d~NVI~VDWs~~a~~~Y~~a----~~n~~~vg~~la~~l~~L~~~~-g~~~~~ihlIGhSLGAHvaG~aG~~~~~ 173 (331)
T PF00151_consen 104 DYNVIVVDWSRGASNNYPQA----VANTRLVGRQLAKFLSFLINNF-GVPPENIHLIGHSLGAHVAGFAGKYLKG 173 (331)
T ss_dssp -EEEEEEE-HHHHSS-HHHH----HHHHHHHHHHHHHHHHHHHHHH----GGGEEEEEETCHHHHHHHHHHHTTT
T ss_pred CceEEEEcchhhccccccch----hhhHHHHHHHHHHHHHHHHhhc-CCChhHEEEEeeccchhhhhhhhhhccC
Confidence 57999999755544333211 2344566777777777655332 3344589999999999999988888876
No 122
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=73.07 E-value=8.4 Score=37.82 Aligned_cols=60 Identities=22% Similarity=0.232 Sum_probs=39.6
Q ss_pred CCceEEEeCCCcccccccccCCCCCcCchhhHHHHHHHHHHHHhhCCC-CCCCCeEEEeecccCccHHH
Q 018994 119 EASILFVDSPVGTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPE-FISNPFYVGGDSYSGITVPA 186 (348)
Q Consensus 119 ~anllfiD~PvG~GfSy~~~~~~~~~~d~~~a~~~~~fL~~f~~~~p~-~~~~~~yi~GESYgG~yvp~ 186 (348)
.+|++...-| |||+|.+... -++.+++ ++++.+++..+++ -+.+.+.+.|+|-||-....
T Consensus 171 ~aNvl~fNYp-GVg~S~G~~s------~~dLv~~-~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~ 231 (365)
T PF05677_consen 171 GANVLVFNYP-GVGSSTGPPS------RKDLVKD-YQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAE 231 (365)
T ss_pred CCcEEEECCC-ccccCCCCCC------HHHHHHH-HHHHHHHHHhcccCCChheEEEeeccccHHHHHH
Confidence 5899999966 9999965331 1222232 3455556655443 35578999999999986554
No 123
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=72.68 E-value=7.2 Score=36.74 Aligned_cols=42 Identities=21% Similarity=0.279 Sum_probs=27.8
Q ss_pred CchhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhc
Q 018994 145 GDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNEN 195 (348)
Q Consensus 145 ~d~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~ 195 (348)
+.+.+.+.=.+|++++.- +++++||.|+|=|. .+..+|+..+
T Consensus 90 sL~~QV~HKlaFik~~~P-----k~~ki~iiGHSiGa----Ym~Lqil~~~ 131 (301)
T KOG3975|consen 90 SLQDQVDHKLAFIKEYVP-----KDRKIYIIGHSIGA----YMVLQILPSI 131 (301)
T ss_pred chhhHHHHHHHHHHHhCC-----CCCEEEEEecchhH----HHHHHHhhhc
Confidence 445566666788876553 45689999999774 4445555543
No 124
>PLN02761 lipase class 3 family protein
Probab=72.32 E-value=9.1 Score=39.59 Aligned_cols=70 Identities=11% Similarity=0.030 Sum_probs=48.4
Q ss_pred hhHHHHHHHHHHHHhhCCCC-C--CCCeEEEeecccCccHHHHHHHHHhhccc---ccCCeeeeceeEecCCccCc
Q 018994 148 KQVHHLDQFLRKWLMDHPEF-I--SNPFYVGGDSYSGITVPALVQRISNENEE---DIKPLINLQGYILGNPRTDM 217 (348)
Q Consensus 148 ~~a~~~~~fL~~f~~~~p~~-~--~~~~yi~GESYgG~yvp~la~~i~~~~~~---~~~~~inlkGi~igng~~d~ 217 (348)
.+.+++...|+...+.+|.. + .-.++|+|||-||-.+-..|..|.+..-. .....+++.-+..|.|-+..
T Consensus 269 SaR~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~DIa~~gln~~~~~~~~~PVtv~TFGsPRVGN 344 (527)
T PLN02761 269 SAREQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYDIAELNLNHVPENNYKIPITVFSFSGPRVGN 344 (527)
T ss_pred hHHHHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHHHHHhccccccccccCCceEEEEcCCCCcCC
Confidence 56678888999888887532 1 22699999999999998888888753211 01224556777777776643
No 125
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=71.62 E-value=5.8 Score=39.56 Aligned_cols=52 Identities=12% Similarity=0.058 Sum_probs=33.6
Q ss_pred CchhhHHHHHHHHHHHHhhCCCCCCCCeE-EEeecccCccHHHHHHHHHhhcccccCCeeeeceeEecCC
Q 018994 145 GDFKQVHHLDQFLRKWLMDHPEFISNPFY-VGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNP 213 (348)
Q Consensus 145 ~d~~~a~~~~~fL~~f~~~~p~~~~~~~y-i~GESYgG~yvp~la~~i~~~~~~~~~~~inlkGi~igng 213 (348)
+-.+.++++..+|+ . +.-+++. |+|+|+||..+-.+|.+-.+. ++++++.++
T Consensus 142 t~~d~~~~~~~ll~----~---lgi~~~~~vvG~SmGG~ial~~a~~~P~~----------v~~lv~ia~ 194 (389)
T PRK06765 142 TILDFVRVQKELIK----S---LGIARLHAVMGPSMGGMQAQEWAVHYPHM----------VERMIGVIG 194 (389)
T ss_pred cHHHHHHHHHHHHH----H---cCCCCceEEEEECHHHHHHHHHHHHChHh----------hheEEEEec
Confidence 34444555555554 2 2334676 999999999999888866554 666666544
No 126
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=70.46 E-value=17 Score=35.27 Aligned_cols=143 Identities=11% Similarity=0.009 Sum_probs=69.9
Q ss_pred CCeeEEEEEEecCCCCCCCCeEEEecCCCCccccc---ccchhcCceEEccCCCCCCCCeeeccCCCCCCCCceEEEeCC
Q 018994 52 EEAQLFYYFVKSDKNPKEDPLLLWLTGGPGCSAFS---GLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEASILFVDSP 128 (348)
Q Consensus 52 ~~~~lfy~f~es~~~p~~~PlvlwlnGGPG~SS~~---g~~~e~GP~~~~~~~~~g~~~~l~~n~~sW~~~anllfiD~P 128 (348)
.+..++=|+..........|.||.++|..|.+... ..+...|=..+..+- .|. ......+..+ ..+
T Consensus 65 ~g~~V~g~l~~P~~~~~~~Pavv~~hGyg~~~~~~~~~~~~a~~G~~vl~~d~-rGq-g~~~~d~~~~---------~~~ 133 (320)
T PF05448_consen 65 DGSRVYGWLYRPKNAKGKLPAVVQFHGYGGRSGDPFDLLPWAAAGYAVLAMDV-RGQ-GGRSPDYRGS---------SGG 133 (320)
T ss_dssp GGEEEEEEEEEES-SSSSEEEEEEE--TT--GGGHHHHHHHHHTT-EEEEE---TTT-SSSS-B-SSB---------SSS
T ss_pred CCCEEEEEEEecCCCCCCcCEEEEecCCCCCCCCcccccccccCCeEEEEecC-CCC-CCCCCCcccc---------CCC
Confidence 35677767776554457889999999988875432 123444444433221 110 0000011111 011
Q ss_pred CcccccccccCCCCCcC-chhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhcccccCCeeeece
Q 018994 129 VGTGFSYARTPHASQTG-DFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQG 207 (348)
Q Consensus 129 vG~GfSy~~~~~~~~~~-d~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inlkG 207 (348)
..-|+-.....+.-.+. -.....|.+.++ .|+...|+...+.+.++|+|-||...-.+|. +.++ +++
T Consensus 134 ~~~g~~~~g~~~~~e~~yyr~~~~D~~rav-d~l~slpevD~~rI~v~G~SqGG~lal~~aa-Ld~r----------v~~ 201 (320)
T PF05448_consen 134 TLKGHITRGIDDNPEDYYYRRVYLDAVRAV-DFLRSLPEVDGKRIGVTGGSQGGGLALAAAA-LDPR----------VKA 201 (320)
T ss_dssp -SSSSTTTTTTS-TTT-HHHHHHHHHHHHH-HHHHTSTTEEEEEEEEEEETHHHHHHHHHHH-HSST-----------SE
T ss_pred CCccHHhcCccCchHHHHHHHHHHHHHHHH-HHHHhCCCcCcceEEEEeecCchHHHHHHHH-hCcc----------ccE
Confidence 12222211000000000 012234444444 4677889998889999999999987776666 3222 888
Q ss_pred eEecCCccCc
Q 018994 208 YILGNPRTDM 217 (348)
Q Consensus 208 i~igng~~d~ 217 (348)
++...|++..
T Consensus 202 ~~~~vP~l~d 211 (320)
T PF05448_consen 202 AAADVPFLCD 211 (320)
T ss_dssp EEEESESSSS
T ss_pred EEecCCCccc
Confidence 8888887654
No 127
>COG0627 Predicted esterase [General function prediction only]
Probab=70.39 E-value=17 Score=35.28 Aligned_cols=132 Identities=17% Similarity=0.157 Sum_probs=69.3
Q ss_pred CCCeEEEecCCCCcccccccchhcCceEEccCCCCCCCCeeecc-CCCCCCCCceEEEeCCCcccccccccCCCCCcCch
Q 018994 69 EDPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLN-PYSWTKEASILFVDSPVGTGFSYARTPHASQTGDF 147 (348)
Q Consensus 69 ~~PlvlwlnGGPG~SS~~g~~~e~GP~~~~~~~~~g~~~~l~~n-~~sW~~~anllfiD~PvG~GfSy~~~~~~~~~~d~ 147 (348)
.+.-|+|+.+|..|.. -.+...++++-..+. .+ -.++-+ -.-|...-++--|+ |+|.|.|+-.+-..-.....
T Consensus 52 ~~ipV~~~l~G~t~~~--~~~~~~~g~~~~a~~-~g--~~~~~p~t~~~~~~~~~~vv~-p~G~~~sfY~d~~~~~~~~~ 125 (316)
T COG0627 52 RDIPVLYLLSGLTCNE--PNVYLLDGLRRQADE-SG--WAVVTPDTSPRGAGVNISVVM-PLGGGASFYSDWTQPPWASG 125 (316)
T ss_pred CCCCEEEEeCCCCCCC--CceEeccchhhhhhh-cC--eEEecCCCCcccCCCCccccc-cCCCccceecccccCccccC
Confidence 4445566667888875 233344444332211 11 111112 22244444555455 79999887443221000110
Q ss_pred hhHHHHHHHHH-----HHHhhCCCCCC-CCeEEEeecccCccHHHHHHHHHhhcccccCCeeeeceeEecCCccCcc
Q 018994 148 KQVHHLDQFLR-----KWLMDHPEFIS-NPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTDMV 218 (348)
Q Consensus 148 ~~a~~~~~fL~-----~f~~~~p~~~~-~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inlkGi~igng~~d~~ 218 (348)
..+...||. .|.+.||.-.. ..-.|+|+|.||+=+-.+|.+-.++ ++.+.=-+|+++|.
T Consensus 126 --~~q~~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~----------f~~~sS~Sg~~~~s 190 (316)
T COG0627 126 --PYQWETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDR----------FKSASSFSGILSPS 190 (316)
T ss_pred --ccchhHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcch----------hceecccccccccc
Confidence 123334432 45566664332 3688999999999888887764432 56666666666665
No 128
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=69.85 E-value=16 Score=34.47 Aligned_cols=78 Identities=17% Similarity=0.275 Sum_probs=51.0
Q ss_pred CCceEEEeCCCcccccccccCCCCCcCchhhHHHHHHHHHHHHhhCCCC-CCCCeEEEeecccCccHHHHHHHHHhhccc
Q 018994 119 EASILFVDSPVGTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEF-ISNPFYVGGDSYSGITVPALVQRISNENEE 197 (348)
Q Consensus 119 ~anllfiD~PvG~GfSy~~~~~~~~~~d~~~a~~~~~fL~~f~~~~p~~-~~~~~yi~GESYgG~yvp~la~~i~~~~~~ 197 (348)
..|++=.|- -|.|.|-++..+ .+.....+..++.|++ ++ +..++.|.|.|-|..-.-.+|. +.
T Consensus 88 n~nv~~~DY-SGyG~S~G~psE---~n~y~Di~avye~Lr~------~~g~~~~Iil~G~SiGt~~tv~Las----r~-- 151 (258)
T KOG1552|consen 88 NCNVVSYDY-SGYGRSSGKPSE---RNLYADIKAVYEWLRN------RYGSPERIILYGQSIGTVPTVDLAS----RY-- 151 (258)
T ss_pred cceEEEEec-ccccccCCCccc---ccchhhHHHHHHHHHh------hcCCCceEEEEEecCCchhhhhHhh----cC--
Confidence 456777774 599999776543 2333334455666653 33 5679999999999765223333 21
Q ss_pred ccCCeeeeceeEecCCccCcc
Q 018994 198 DIKPLINLQGYILGNPRTDMV 218 (348)
Q Consensus 198 ~~~~~inlkGi~igng~~d~~ 218 (348)
. +.|+++-+|+++-.
T Consensus 152 ----~--~~alVL~SPf~S~~ 166 (258)
T KOG1552|consen 152 ----P--LAAVVLHSPFTSGM 166 (258)
T ss_pred ----C--cceEEEeccchhhh
Confidence 2 99999999998754
No 129
>PLN02847 triacylglycerol lipase
Probab=69.82 E-value=7.5 Score=40.85 Aligned_cols=58 Identities=19% Similarity=0.177 Sum_probs=39.2
Q ss_pred HHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhcccccCCeeeeceeEecCC-ccCc
Q 018994 152 HLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNP-RTDM 217 (348)
Q Consensus 152 ~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inlkGi~igng-~~d~ 217 (348)
.+...|++-+.++|.| ++.|+|||.||-.+..++..+.++.. .-+++.+..|-| +++.
T Consensus 236 ~i~~~L~kal~~~PdY---kLVITGHSLGGGVAALLAilLRe~~~-----fssi~CyAFgPp~cvS~ 294 (633)
T PLN02847 236 LSTPCLLKALDEYPDF---KIKIVGHSLGGGTAALLTYILREQKE-----FSSTTCVTFAPAACMTW 294 (633)
T ss_pred HHHHHHHHHHHHCCCC---eEEEeccChHHHHHHHHHHHHhcCCC-----CCCceEEEecCchhcCH
Confidence 3444556666778988 89999999999988888776654321 234566666653 3443
No 130
>PLN02802 triacylglycerol lipase
Probab=68.72 E-value=9.8 Score=39.23 Aligned_cols=64 Identities=11% Similarity=0.080 Sum_probs=45.2
Q ss_pred hhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhcccccCCeeeeceeEecCCccC
Q 018994 148 KQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTD 216 (348)
Q Consensus 148 ~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inlkGi~igng~~d 216 (348)
.+.+++..-|+.+++++|.-. ..++|+|||-||-.+-..|..|.+.... .+.+..+..|.|-+.
T Consensus 309 S~reqVl~eV~~Ll~~Y~~e~-~sI~VTGHSLGGALAtLaA~dL~~~~~~----~~pV~vyTFGsPRVG 372 (509)
T PLN02802 309 SLSESVVGEVRRLMEKYKGEE-LSITVTGHSLGAALALLVADELATCVPA----APPVAVFSFGGPRVG 372 (509)
T ss_pred hHHHHHHHHHHHHHHhCCCCc-ceEEEeccchHHHHHHHHHHHHHHhCCC----CCceEEEEcCCCCcc
Confidence 455678888888888876532 3799999999999998888888664321 124556666666554
No 131
>PLN00413 triacylglycerol lipase
Probab=68.32 E-value=10 Score=38.82 Aligned_cols=40 Identities=15% Similarity=0.223 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHh
Q 018994 151 HHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISN 193 (348)
Q Consensus 151 ~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~ 193 (348)
.++...|++.++++|.+ +++|+|||-||..+-..|..+..
T Consensus 268 y~i~~~Lk~ll~~~p~~---kliVTGHSLGGALAtLaA~~L~~ 307 (479)
T PLN00413 268 YTILRHLKEIFDQNPTS---KFILSGHSLGGALAILFTAVLIM 307 (479)
T ss_pred HHHHHHHHHHHHHCCCC---eEEEEecCHHHHHHHHHHHHHHh
Confidence 35677888888888876 79999999999998888876653
No 132
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=67.93 E-value=10 Score=40.27 Aligned_cols=117 Identities=25% Similarity=0.368 Sum_probs=63.1
Q ss_pred CCCCeEEEecCCCCcccccccchhcCceEEccCCCCCCCCeeeccCCCCCCCC----------ceEEEeCCCcc---ccc
Q 018994 68 KEDPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEA----------SILFVDSPVGT---GFS 134 (348)
Q Consensus 68 ~~~PlvlwlnGGPG~SS~~g~~~e~GP~~~~~~~~~g~~~~l~~n~~sW~~~a----------nllfiD~PvG~---GfS 134 (348)
..-|++|.+-||||. .++.|.++|.+.. =|++||. .|+ |.-
T Consensus 640 kkYptvl~VYGGP~V-------------------------QlVnnsfkgi~ylR~~~LaslGy~Vv~IDn-RGS~hRGlk 693 (867)
T KOG2281|consen 640 KKYPTVLNVYGGPGV-------------------------QLVNNSFKGIQYLRFCRLASLGYVVVFIDN-RGSAHRGLK 693 (867)
T ss_pred CCCceEEEEcCCCce-------------------------EEeeccccceehhhhhhhhhcceEEEEEcC-CCccccchh
Confidence 457999999999996 2555666666542 2588994 343 211
Q ss_pred ccccCCCCCcCchhhHHHHHHHHHHHHhhCCCCCC-CCeEEEeecccCccHHHHHHHHHhhcccccCCeeeeceeEecCC
Q 018994 135 YARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFIS-NPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNP 213 (348)
Q Consensus 135 y~~~~~~~~~~d~~~a~~~~~fL~~f~~~~p~~~~-~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inlkGi~igng 213 (348)
+...-. ...+..+ ++|=.+-|| |+..--.|.. ..+-|-|.||||-..-+. |.+..+ -+|-.+-|.|
T Consensus 694 FE~~ik-~kmGqVE-~eDQVeglq-~Laeq~gfidmdrV~vhGWSYGGYLSlm~---L~~~P~-------IfrvAIAGap 760 (867)
T KOG2281|consen 694 FESHIK-KKMGQVE-VEDQVEGLQ-MLAEQTGFIDMDRVGVHGWSYGGYLSLMG---LAQYPN-------IFRVAIAGAP 760 (867)
T ss_pred hHHHHh-hccCeee-ehhhHHHHH-HHHHhcCcccchheeEeccccccHHHHHH---hhcCcc-------eeeEEeccCc
Confidence 110000 0112111 122234443 3322222433 358999999999644332 222221 1777788999
Q ss_pred ccCccccccc
Q 018994 214 RTDMVVEQNS 223 (348)
Q Consensus 214 ~~d~~~~~~~ 223 (348)
++++..-...
T Consensus 761 VT~W~~YDTg 770 (867)
T KOG2281|consen 761 VTDWRLYDTG 770 (867)
T ss_pred ceeeeeeccc
Confidence 9988654333
No 133
>KOG3101 consensus Esterase D [General function prediction only]
Probab=67.92 E-value=22 Score=32.79 Aligned_cols=184 Identities=16% Similarity=0.134 Sum_probs=81.6
Q ss_pred eeEEEEEEeC----CCCCeeEEE-EEEecC-CCCCCCCeEEEecCCCCcccc-------c-ccchhcCceEEccCCCCCC
Q 018994 40 ELETGYVGVG----ESEEAQLFY-YFVKSD-KNPKEDPLLLWLTGGPGCSAF-------S-GLAYEIGPVNFNTVEYNGS 105 (348)
Q Consensus 40 ~~~sGyl~v~----~~~~~~lfy-~f~es~-~~p~~~PlvlwlnGGPG~SS~-------~-g~~~e~GP~~~~~~~~~g~ 105 (348)
+..-|+..|- ++.+..|=| .|++.. ...+.-|+++||.|= -|.-. + -.-.++|=-.+.++....+
T Consensus 8 k~f~G~q~vy~H~S~tl~c~Mtf~vylPp~a~~~k~~P~lf~LSGL-TCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG 86 (283)
T KOG3101|consen 8 KCFGGRQKVYKHNSNTLKCSMTFGVYLPPDAPRGKRCPVLFYLSGL-TCTHENFIEKSGFQQQASKHGLAVVAPDTSPRG 86 (283)
T ss_pred ccccceeeeeeccccccccceEEEEecCCCcccCCcCceEEEecCC-cccchhhHhhhhHHHhHhhcCeEEECCCCCCCc
Confidence 4455555552 122344544 444422 233446999999853 44211 1 1223456556665421111
Q ss_pred CCeeeccCCCCCCCCceEEEeCCCcccccccccCCCCCcCchhhHHHHHHHHHHHHh-hCCCCCCCCeEEEeecccCccH
Q 018994 106 LPTLRLNPYSWTKEASILFVDSPVGTGFSYARTPHASQTGDFKQVHHLDQFLRKWLM-DHPEFISNPFYVGGDSYSGITV 184 (348)
Q Consensus 106 ~~~l~~n~~sW~~~anllfiD~PvG~GfSy~~~~~~~~~~d~~~a~~~~~fL~~f~~-~~p~~~~~~~yi~GESYgG~yv 184 (348)
-.+.-.+.||.- =.|.||=-..+.+.+.+. -+.-+.+.+-|-+-+. .+-.....+.-|+|+|.|||=+
T Consensus 87 -~~v~g~~eswDF---------G~GAGFYvnAt~epw~~~-yrMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGA 155 (283)
T KOG3101|consen 87 -VEVAGDDESWDF---------GQGAGFYVNATQEPWAKH-YRMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGA 155 (283)
T ss_pred -cccCCCcccccc---------cCCceeEEecccchHhhh-hhHHHHHHHHHHHHhccccccccchhcceeccccCCCce
Confidence 123345568752 457777433333222111 1111112222222111 2222333368899999999954
Q ss_pred HHHHHHHHhhcccccCCeeeeceeEecCCccCccccccccccccccCCCCCHHHHHHHHhHh
Q 018994 185 PALVQRISNENEEDIKPLINLQGYILGNPRTDMVVEQNSQIPFAHGMGLISNELYESLKITC 246 (348)
Q Consensus 185 p~la~~i~~~~~~~~~~~inlkGi~igng~~d~~~~~~~~~~~~~~~gli~~~~~~~~~~~C 246 (348)
-.++.+ | .=..|.+---.|.++|..---..-.|.-+.|- ++.+|++....|
T Consensus 156 l~~~Lk----n------~~kykSvSAFAPI~NP~~cpWGqKAf~gYLG~-~ka~W~~yDat~ 206 (283)
T KOG3101|consen 156 LTIYLK----N------PSKYKSVSAFAPICNPINCPWGQKAFTGYLGD-NKAQWEAYDATH 206 (283)
T ss_pred EEEEEc----C------cccccceeccccccCcccCcchHHHhhcccCC-ChHHHhhcchHH
Confidence 333321 1 01255555444555543210011112223343 556777765555
No 134
>PLN02408 phospholipase A1
Probab=67.53 E-value=12 Score=37.16 Aligned_cols=64 Identities=11% Similarity=0.071 Sum_probs=44.9
Q ss_pred hhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhcccccCCeeeeceeEecCCccC
Q 018994 148 KQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTD 216 (348)
Q Consensus 148 ~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inlkGi~igng~~d 216 (348)
...+++.+.|++..+++|... ..++|+|||-||-.+-..|..|.+.-.. ...+.-+..|.|-+.
T Consensus 179 s~r~qVl~eI~~ll~~y~~~~-~sI~vTGHSLGGALAtLaA~dl~~~~~~----~~~V~v~tFGsPRVG 242 (365)
T PLN02408 179 SLQEMVREEIARLLQSYGDEP-LSLTITGHSLGAALATLTAYDIKTTFKR----APMVTVISFGGPRVG 242 (365)
T ss_pred hHHHHHHHHHHHHHHhcCCCC-ceEEEeccchHHHHHHHHHHHHHHhcCC----CCceEEEEcCCCCcc
Confidence 455778888888888888752 3699999999999998888888764211 012445556666554
No 135
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=66.78 E-value=10 Score=37.09 Aligned_cols=60 Identities=22% Similarity=0.360 Sum_probs=43.0
Q ss_pred HHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhcccccCCeeeeceeEecCCccCc
Q 018994 152 HLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTDM 217 (348)
Q Consensus 152 ~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inlkGi~igng~~d~ 217 (348)
.+.+-++.-..++|+| .++++|+|-||-.+...|..|...... ....++-+..|-|-+..
T Consensus 156 ~~~~~~~~L~~~~~~~---~i~vTGHSLGgAlA~laa~~i~~~~~~---~~~~v~v~tFG~PRvGn 215 (336)
T KOG4569|consen 156 GLDAELRRLIELYPNY---SIWVTGHSLGGALASLAALDLVKNGLK---TSSPVKVYTFGQPRVGN 215 (336)
T ss_pred HHHHHHHHHHHhcCCc---EEEEecCChHHHHHHHHHHHHHHcCCC---CCCceEEEEecCCCccc
Confidence 3444455555677865 999999999999999999999886532 13456666677776543
No 136
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=66.57 E-value=15 Score=37.04 Aligned_cols=36 Identities=11% Similarity=0.109 Sum_probs=26.1
Q ss_pred CCeEEEeecccCccHHHHHHHHHhhcccccCCeeeeceeEecCCcc
Q 018994 170 NPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRT 215 (348)
Q Consensus 170 ~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inlkGi~igng~~ 215 (348)
....|+|.|+||--.-.++.+-.+ .+.+++..+|.+
T Consensus 288 ~~~~IaG~S~GGl~AL~~al~~Pd----------~Fg~v~s~Sgs~ 323 (411)
T PRK10439 288 DRTVVAGQSFGGLAALYAGLHWPE----------RFGCVLSQSGSF 323 (411)
T ss_pred cceEEEEEChHHHHHHHHHHhCcc----------cccEEEEeccce
Confidence 368999999999877777664332 267777777754
No 137
>PLN02934 triacylglycerol lipase
Probab=66.12 E-value=14 Score=38.16 Aligned_cols=41 Identities=20% Similarity=0.225 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhh
Q 018994 151 HHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNE 194 (348)
Q Consensus 151 ~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~ 194 (348)
.++...|+++++++|.+ +++++|||-||-.+-..|..+...
T Consensus 305 ~~v~~~lk~ll~~~p~~---kIvVTGHSLGGALAtLaA~~L~l~ 345 (515)
T PLN02934 305 YAVRSKLKSLLKEHKNA---KFVVTGHSLGGALAILFPTVLVLQ 345 (515)
T ss_pred HHHHHHHHHHHHHCCCC---eEEEeccccHHHHHHHHHHHHHHh
Confidence 45778888888888886 899999999999888887766543
No 138
>PLN02162 triacylglycerol lipase
Probab=64.64 E-value=8.6 Score=39.27 Aligned_cols=40 Identities=18% Similarity=0.277 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHh
Q 018994 151 HHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISN 193 (348)
Q Consensus 151 ~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~ 193 (348)
..+.+.|++.+.++|.+ +++++|||-||-.+-..|..+..
T Consensus 262 ~~I~~~L~~lL~k~p~~---kliVTGHSLGGALAtLaAa~L~~ 301 (475)
T PLN02162 262 YTIRQMLRDKLARNKNL---KYILTGHSLGGALAALFPAILAI 301 (475)
T ss_pred HHHHHHHHHHHHhCCCc---eEEEEecChHHHHHHHHHHHHHH
Confidence 34666777888888876 79999999999988777766654
No 139
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=64.14 E-value=26 Score=36.01 Aligned_cols=32 Identities=13% Similarity=0.148 Sum_probs=20.5
Q ss_pred HHHHHHHhhCCCCCCCCeEEEeecccCccHHHH
Q 018994 155 QFLRKWLMDHPEFISNPFYVGGDSYSGITVPAL 187 (348)
Q Consensus 155 ~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~l 187 (348)
+.+++.-+.|-. ...++-|+|||-|+.-|-.+
T Consensus 166 kWV~~NIe~FGG-Dp~NVTl~GeSAGa~si~~L 197 (491)
T COG2272 166 KWVRDNIEAFGG-DPQNVTLFGESAGAASILTL 197 (491)
T ss_pred HHHHHHHHHhCC-CccceEEeeccchHHHHHHh
Confidence 444444455533 23479999999998876544
No 140
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=62.35 E-value=20 Score=36.77 Aligned_cols=86 Identities=16% Similarity=0.223 Sum_probs=59.5
Q ss_pred hhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhcccccCCeeeeceeEecCCccCccccccc--cc
Q 018994 148 KQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTDMVVEQNS--QI 225 (348)
Q Consensus 148 ~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inlkGi~igng~~d~~~~~~~--~~ 225 (348)
+++.--...++.||.+-|++ -|..|-|=||+=.-..|++-.+. +.||+.|.|.++....... +.
T Consensus 97 ~~~~~aK~l~~~~Yg~~p~~----sY~~GcS~GGRqgl~~AQryP~d----------fDGIlAgaPA~~~~~~~~~~~~~ 162 (474)
T PF07519_consen 97 ETTVVAKALIEAFYGKAPKY----SYFSGCSTGGRQGLMAAQRYPED----------FDGILAGAPAINWTHLQLAHAWP 162 (474)
T ss_pred HHHHHHHHHHHHHhCCCCCc----eEEEEeCCCcchHHHHHHhChhh----------cCeEEeCCchHHHHHHHHHhhhh
Confidence 33344446778899988875 69999999999999999987765 9999999999987543221 11
Q ss_pred cc-cc--cCCCCCHHHHH----HHHhHhc
Q 018994 226 PF-AH--GMGLISNELYE----SLKITCG 247 (348)
Q Consensus 226 ~~-~~--~~gli~~~~~~----~~~~~C~ 247 (348)
.. .. .-..++..+++ ++.+.|+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~i~~avl~~CD 191 (474)
T PF07519_consen 163 AQVMYPDPGGYLSPCKLDLIHAAVLAACD 191 (474)
T ss_pred hhhhccCCCCCCCHHHHHHHHHHHHHhcc
Confidence 11 11 13567766554 4456785
No 141
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=62.29 E-value=69 Score=31.44 Aligned_cols=121 Identities=18% Similarity=0.243 Sum_probs=66.3
Q ss_pred CCeeEEEEEEecCCCCCCCCeEEEecCCCCcccc-c-----ccchhcCceEEccCCCCCCCCeeeccCCCCCCCCceEEE
Q 018994 52 EEAQLFYYFVKSDKNPKEDPLLLWLTGGPGCSAF-S-----GLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEASILFV 125 (348)
Q Consensus 52 ~~~~lfy~f~es~~~p~~~PlvlwlnGGPG~SS~-~-----g~~~e~GP~~~~~~~~~g~~~~l~~n~~sW~~~anllfi 125 (348)
++.-.+.|... . .....|+|+-++|==|.|.- + ..+.+-| | .++-.
T Consensus 59 g~~~~ldw~~~-p-~~~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg----------------------~----~~Vv~ 110 (345)
T COG0429 59 GGFIDLDWSED-P-RAAKKPLVVLFHGLEGSSNSPYARGLMRALSRRG----------------------W----LVVVF 110 (345)
T ss_pred CCEEEEeeccC-c-cccCCceEEEEeccCCCCcCHHHHHHHHHHHhcC----------------------C----eEEEE
Confidence 35667777532 2 23456999999996666532 1 2222222 2 23334
Q ss_pred eCCCcccccccccCCCCCcCchhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhcccccCCeeee
Q 018994 126 DSPVGTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINL 205 (348)
Q Consensus 126 D~PvG~GfSy~~~~~~~~~~d~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inl 205 (348)
+ -.|-|.+-.....-|..++. +|+..||..-..++|. +++|.+|-|-||. .||..+.++-+. ...-
T Consensus 111 ~-~Rgcs~~~n~~p~~yh~G~t---~D~~~~l~~l~~~~~~---r~~~avG~SLGgn---mLa~ylgeeg~d----~~~~ 176 (345)
T COG0429 111 H-FRGCSGEANTSPRLYHSGET---EDIRFFLDWLKARFPP---RPLYAVGFSLGGN---MLANYLGEEGDD----LPLD 176 (345)
T ss_pred e-cccccCCcccCcceecccch---hHHHHHHHHHHHhCCC---CceEEEEecccHH---HHHHHHHhhccC----cccc
Confidence 4 34555543333333434444 4454555433334554 6999999999996 456666665322 2236
Q ss_pred ceeEecCCc
Q 018994 206 QGYILGNPR 214 (348)
Q Consensus 206 kGi~igng~ 214 (348)
.++++-+|+
T Consensus 177 aa~~vs~P~ 185 (345)
T COG0429 177 AAVAVSAPF 185 (345)
T ss_pred eeeeeeCHH
Confidence 667776665
No 142
>PLN02310 triacylglycerol lipase
Probab=61.37 E-value=18 Score=36.42 Aligned_cols=64 Identities=14% Similarity=0.081 Sum_probs=42.7
Q ss_pred hhHHHHHHHHHHHHhhCCCC-CCCCeEEEeecccCccHHHHHHHHHhhcccccCCeeeeceeEecCCccC
Q 018994 148 KQVHHLDQFLRKWLMDHPEF-ISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTD 216 (348)
Q Consensus 148 ~~a~~~~~fL~~f~~~~p~~-~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inlkGi~igng~~d 216 (348)
.+.+++...+++..+.+++- ....+.|+|||-||-.+-..|..|.... +.+++.-+..|.|-+.
T Consensus 186 sa~~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~dl~~~~-----~~~~v~vyTFGsPRVG 250 (405)
T PLN02310 186 SASEQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYEAATTI-----PDLFVSVISFGAPRVG 250 (405)
T ss_pred hHHHHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHHHHHhC-----cCcceeEEEecCCCcc
Confidence 34566777777777666531 2237999999999998888777775432 1345566666776664
No 143
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=60.64 E-value=14 Score=33.42 Aligned_cols=49 Identities=10% Similarity=-0.007 Sum_probs=36.0
Q ss_pred chhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhc
Q 018994 146 DFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNEN 195 (348)
Q Consensus 146 d~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~ 195 (348)
-+..++.+.+.|.+..+..+.- .+++-+.|+|-||.++=.....+.+.+
T Consensus 55 I~~~g~rL~~eI~~~~~~~~~~-~~~IsfIgHSLGGli~r~al~~~~~~~ 103 (217)
T PF05057_consen 55 IDVCGERLAEEILEHIKDYESK-IRKISFIGHSLGGLIARYALGLLHDKP 103 (217)
T ss_pred hHHHHHHHHHHHHHhccccccc-cccceEEEecccHHHHHHHHHHhhhcc
Confidence 3456777778887777665553 458999999999999977666666543
No 144
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=60.39 E-value=6.4 Score=35.65 Aligned_cols=34 Identities=26% Similarity=0.351 Sum_probs=28.8
Q ss_pred HHHhhCCCCCCCCeEEEeecccCccHHHHHHHHH
Q 018994 159 KWLMDHPEFISNPFYVGGDSYSGITVPALVQRIS 192 (348)
Q Consensus 159 ~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~ 192 (348)
+|++.+|+-..+++-|.|-|.||-.+-.+|....
T Consensus 11 ~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~ 44 (213)
T PF08840_consen 11 DWLKSHPEVDPDKIGIIGISKGAELALLLASRFP 44 (213)
T ss_dssp HHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS
T ss_pred HHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC
Confidence 5888999999889999999999999999888754
No 145
>PRK14566 triosephosphate isomerase; Provisional
Probab=57.10 E-value=23 Score=33.51 Aligned_cols=61 Identities=20% Similarity=0.389 Sum_probs=46.1
Q ss_pred hhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhcccccCCeeeeceeEecCCccCcc
Q 018994 147 FKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTDMV 218 (348)
Q Consensus 147 ~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inlkGi~igng~~d~~ 218 (348)
.+.|++...||++++.+.-......+=|. |||-.-|.-+..|.... ++.|+.||...+++.
T Consensus 188 ~e~a~~v~~~IR~~l~~~~~~~a~~~rIl---YGGSV~~~N~~~l~~~~--------dIDG~LVGgASL~~~ 248 (260)
T PRK14566 188 PEQAQEVHAFIRKRLSEVSPFIGENIRIL---YGGSVTPSNAADLFAQP--------DVDGGLIGGASLNST 248 (260)
T ss_pred HHHHHHHHHHHHHHHHhcCccccccceEE---ecCCCCHhHHHHHhcCC--------CCCeEEechHhcCHH
Confidence 35678899999999875421112233343 99999999999998764 499999999998874
No 146
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=56.76 E-value=15 Score=35.54 Aligned_cols=79 Identities=9% Similarity=-0.044 Sum_probs=44.2
Q ss_pred CceEEEeCCCcccccccccCCCCCcCchhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhccccc
Q 018994 120 ASILFVDSPVGTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDI 199 (348)
Q Consensus 120 anllfiD~PvG~GfSy~~~~~~~~~~d~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~ 199 (348)
.+++-+|. .|-|.|-. .. +-++-...++..+++...++.+ ..++++.|+|+||..+-.++..-.+
T Consensus 95 ~~V~~~D~-~g~g~s~~----~~-~~~d~~~~~~~~~v~~l~~~~~---~~~i~lvGhS~GG~i~~~~~~~~~~------ 159 (350)
T TIGR01836 95 QDVYLIDW-GYPDRADR----YL-TLDDYINGYIDKCVDYICRTSK---LDQISLLGICQGGTFSLCYAALYPD------ 159 (350)
T ss_pred CeEEEEeC-CCCCHHHh----cC-CHHHHHHHHHHHHHHHHHHHhC---CCcccEEEECHHHHHHHHHHHhCch------
Confidence 46777785 35554421 11 1111222334444444444433 3589999999999877665543111
Q ss_pred CCeeeeceeEecCCccCc
Q 018994 200 KPLINLQGYILGNPRTDM 217 (348)
Q Consensus 200 ~~~inlkGi~igng~~d~ 217 (348)
.++++++.++.++.
T Consensus 160 ----~v~~lv~~~~p~~~ 173 (350)
T TIGR01836 160 ----KIKNLVTMVTPVDF 173 (350)
T ss_pred ----heeeEEEecccccc
Confidence 27788877777764
No 147
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=55.95 E-value=24 Score=32.45 Aligned_cols=40 Identities=23% Similarity=0.277 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhh
Q 018994 151 HHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNE 194 (348)
Q Consensus 151 ~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~ 194 (348)
+...+++++...++++ +++|+|||=||..+-+.|..+.+.
T Consensus 69 ~~A~~yl~~~~~~~~~----~i~v~GHSkGGnLA~yaa~~~~~~ 108 (224)
T PF11187_consen 69 KSALAYLKKIAKKYPG----KIYVTGHSKGGNLAQYAAANCDDE 108 (224)
T ss_pred HHHHHHHHHHHHhCCC----CEEEEEechhhHHHHHHHHHccHH
Confidence 3445667776676665 699999999999888888875443
No 148
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=55.59 E-value=14 Score=33.93 Aligned_cols=104 Identities=23% Similarity=0.179 Sum_probs=64.6
Q ss_pred CeeEEEEEEecCCCCCCCCeEEEecCCCCcccccccchhcCceEEccCCCCCCCCeeeccCCCCCCCCceEEEeCCCccc
Q 018994 53 EAQLFYYFVKSDKNPKEDPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEASILFVDSPVGTG 132 (348)
Q Consensus 53 ~~~lfy~f~es~~~p~~~PlvlwlnGGPG~SS~~g~~~e~GP~~~~~~~~~g~~~~l~~n~~sW~~~anllfiD~PvG~G 132 (348)
|.+|.|-- .. +-.--||.+-|--||+-.. .+|...+- ++ -. ...|+=+| |.|.|
T Consensus 30 g~ql~y~~--~G---~G~~~iLlipGalGs~~tD-----f~pql~~l------------~k--~l-~~TivawD-PpGYG 83 (277)
T KOG2984|consen 30 GTQLGYCK--YG---HGPNYILLIPGALGSYKTD-----FPPQLLSL------------FK--PL-QVTIVAWD-PPGYG 83 (277)
T ss_pred Cceeeeee--cC---CCCceeEeccccccccccc-----CCHHHHhc------------CC--CC-ceEEEEEC-CCCCC
Confidence 46787752 21 2234577788888887552 33322221 11 01 15788899 67999
Q ss_pred ccccccCCC---CCcCchhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHH
Q 018994 133 FSYARTPHA---SQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRIS 192 (348)
Q Consensus 133 fSy~~~~~~---~~~~d~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~ 192 (348)
-|...+..- +-..|.+.|-|+.++|. -.+|-|.|-|=||+-.-..|.+-.
T Consensus 84 ~SrPP~Rkf~~~ff~~Da~~avdLM~aLk----------~~~fsvlGWSdGgiTalivAak~~ 136 (277)
T KOG2984|consen 84 TSRPPERKFEVQFFMKDAEYAVDLMEALK----------LEPFSVLGWSDGGITALIVAAKGK 136 (277)
T ss_pred CCCCCcccchHHHHHHhHHHHHHHHHHhC----------CCCeeEeeecCCCeEEEEeeccCh
Confidence 998754321 12457777778877773 238899999999987665555433
No 149
>PRK14567 triosephosphate isomerase; Provisional
Probab=55.37 E-value=27 Score=32.81 Aligned_cols=61 Identities=18% Similarity=0.312 Sum_probs=45.9
Q ss_pred hhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhcccccCCeeeeceeEecCCccCcc
Q 018994 147 FKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTDMV 218 (348)
Q Consensus 147 ~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inlkGi~igng~~d~~ 218 (348)
.+.+++...++++++.++-+-....+=|. |||-.-|.=+..|.+.. ++.|+.||.+.+++.
T Consensus 178 ~e~i~~~~~~IR~~l~~~~~~~a~~v~Il---YGGSV~~~N~~~l~~~~--------diDG~LVGgasL~~~ 238 (253)
T PRK14567 178 LEQIQETHQFIRSLLAKVDERLAKNIKIV---YGGSLKAENAKDILSLP--------DVDGGLIGGASLKAA 238 (253)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccceEE---EcCcCCHHHHHHHHcCC--------CCCEEEeehhhhcHH
Confidence 46678888999999876422112233333 99999999999998754 499999999999875
No 150
>KOG3079 consensus Uridylate kinase/adenylate kinase [Nucleotide transport and metabolism]
Probab=55.14 E-value=7.2 Score=35.00 Aligned_cols=16 Identities=31% Similarity=0.916 Sum_probs=13.7
Q ss_pred CCCCeEEEecCCCCcc
Q 018994 68 KEDPLLLWLTGGPGCS 83 (348)
Q Consensus 68 ~~~PlvlwlnGGPG~S 83 (348)
.+.|-|||+-|||||-
T Consensus 5 ~~~~~IifVlGGPGsg 20 (195)
T KOG3079|consen 5 LDKPPIIFVLGGPGSG 20 (195)
T ss_pred ccCCCEEEEEcCCCCC
Confidence 3578999999999984
No 151
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=54.94 E-value=12 Score=33.88 Aligned_cols=59 Identities=19% Similarity=0.292 Sum_probs=41.8
Q ss_pred CCcccccccccCCCCCcCchhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHh
Q 018994 128 PVGTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISN 193 (348)
Q Consensus 128 PvG~GfSy~~~~~~~~~~d~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~ 193 (348)
=.|||-|.+.-.++ .++.+.|....+.++ .+||.-. -+.+.|-|+|+-.+-.+|.+..+
T Consensus 68 fRgVG~S~G~fD~G--iGE~~Da~aaldW~~---~~hp~s~--~~~l~GfSFGa~Ia~~la~r~~e 126 (210)
T COG2945 68 FRGVGRSQGEFDNG--IGELEDAAAALDWLQ---ARHPDSA--SCWLAGFSFGAYIAMQLAMRRPE 126 (210)
T ss_pred ccccccccCcccCC--cchHHHHHHHHHHHH---hhCCCch--hhhhcccchHHHHHHHHHHhccc
Confidence 36999998765443 455555665666665 4788753 36999999999888888887654
No 152
>PF07849 DUF1641: Protein of unknown function (DUF1641); InterPro: IPR012440 Archaeal and bacterial hypothetical proteins are found in this family, with the region in question being approximately 40 residues long.
Probab=54.38 E-value=4 Score=27.39 Aligned_cols=15 Identities=20% Similarity=0.140 Sum_probs=12.8
Q ss_pred hhhcCchHHHHhcCC
Q 018994 331 RYWDNDHNVRKALHI 345 (348)
Q Consensus 331 ~~YlN~p~Vq~ALhV 345 (348)
-.-|++||||.+|++
T Consensus 17 ~~~l~DpdvqrgL~~ 31 (42)
T PF07849_consen 17 LRALRDPDVQRGLGF 31 (42)
T ss_pred HHHHcCHHHHHHHHH
Confidence 467999999999974
No 153
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=52.40 E-value=30 Score=32.42 Aligned_cols=124 Identities=19% Similarity=0.107 Sum_probs=61.4
Q ss_pred CceEEEeCCCcccccccccCCCCCcCchh-hHHHHHHHHHHHHhh-CCCCCCCCeEEEeecccCccHHHHHHHHHhhccc
Q 018994 120 ASILFVDSPVGTGFSYARTPHASQTGDFK-QVHHLDQFLRKWLMD-HPEFISNPFYVGGDSYSGITVPALVQRISNENEE 197 (348)
Q Consensus 120 anllfiD~PvG~GfSy~~~~~~~~~~d~~-~a~~~~~fL~~f~~~-~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~ 197 (348)
..||-.| =.|+|=|.....+.....-.+ +-.|+-..|. ++++ -|+ .|.|..|+||||+-+-.+++.= +.+..
T Consensus 58 f~Vlt~d-yRG~g~S~p~~~~~~~~~~~DwA~~D~~aal~-~~~~~~~~---~P~y~vgHS~GGqa~gL~~~~~-k~~a~ 131 (281)
T COG4757 58 FEVLTFD-YRGIGQSRPASLSGSQWRYLDWARLDFPAALA-ALKKALPG---HPLYFVGHSFGGQALGLLGQHP-KYAAF 131 (281)
T ss_pred ceEEEEe-cccccCCCccccccCccchhhhhhcchHHHHH-HHHhhCCC---CceEEeeccccceeecccccCc-cccee
Confidence 3556666 358888775544322222111 2233433333 3332 244 5999999999999876655432 11110
Q ss_pred ---cc--------CCeeeeceeEecCCccCcccccccc-ccccccCC-CCCHHHHHHHHhHhcCC
Q 018994 198 ---DI--------KPLINLQGYILGNPRTDMVVEQNSQ-IPFAHGMG-LISNELYESLKITCGGE 249 (348)
Q Consensus 198 ---~~--------~~~inlkGi~igng~~d~~~~~~~~-~~~~~~~g-li~~~~~~~~~~~C~~~ 249 (348)
+. ...-.++.+.++|-..-+..-...+ +.-+.+.| -++-..+.+..+-|..+
T Consensus 132 ~vfG~gagwsg~m~~~~~l~~~~l~~lv~p~lt~w~g~~p~~l~G~G~d~p~~v~RdW~RwcR~p 196 (281)
T COG4757 132 AVFGSGAGWSGWMGLRERLGAVLLWNLVGPPLTFWKGYMPKDLLGLGSDLPGTVMRDWARWCRHP 196 (281)
T ss_pred eEeccccccccchhhhhcccceeeccccccchhhccccCcHhhcCCCccCcchHHHHHHHHhcCc
Confidence 00 0012345555555443333222211 11223344 34556789999999764
No 154
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=51.76 E-value=17 Score=33.98 Aligned_cols=64 Identities=20% Similarity=0.281 Sum_probs=44.5
Q ss_pred ceEEEeCCCcccccccccCCCCCcCchhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhh
Q 018994 121 SILFVDSPVGTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNE 194 (348)
Q Consensus 121 nllfiD~PvG~GfSy~~~~~~~~~~d~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~ 194 (348)
.++=|+-| |-|=-+.. ...++.++.|+.+...|+. -+..+|+-++|+|+||...=.+|.++.+.
T Consensus 35 el~avqlP-GR~~r~~e---p~~~di~~Lad~la~el~~------~~~d~P~alfGHSmGa~lAfEvArrl~~~ 98 (244)
T COG3208 35 ELLAVQLP-GRGDRFGE---PLLTDIESLADELANELLP------PLLDAPFALFGHSMGAMLAFEVARRLERA 98 (244)
T ss_pred heeeecCC-CcccccCC---cccccHHHHHHHHHHHhcc------ccCCCCeeecccchhHHHHHHHHHHHHHc
Confidence 45667766 66633322 2335666667777666642 35667999999999999999999988765
No 155
>PLN03037 lipase class 3 family protein; Provisional
Probab=50.52 E-value=31 Score=35.81 Aligned_cols=64 Identities=13% Similarity=0.126 Sum_probs=41.5
Q ss_pred hHHHHHHHHHHHHhhCCCC-CCCCeEEEeecccCccHHHHHHHHHhhcccccCCeeeeceeEecCCccC
Q 018994 149 QVHHLDQFLRKWLMDHPEF-ISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTD 216 (348)
Q Consensus 149 ~a~~~~~fL~~f~~~~p~~-~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inlkGi~igng~~d 216 (348)
+.+++...|++..+.+++. ..-.++|+|||-||-.+-..|..|.+.... ..++.-+..|.|-+.
T Consensus 296 areQVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~DIa~~~p~----~~~VtvyTFGsPRVG 360 (525)
T PLN03037 296 ASEQVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYEAARSVPA----LSNISVISFGAPRVG 360 (525)
T ss_pred hHHHHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHHHHHhCCC----CCCeeEEEecCCCcc
Confidence 3456777777777777642 233699999999999988888777664321 113444555655554
No 156
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=49.06 E-value=35 Score=32.20 Aligned_cols=40 Identities=18% Similarity=0.195 Sum_probs=28.3
Q ss_pred CeEEEeecccCccHHHHHHHHHhhcccccCCeeeeceeEecCCcc
Q 018994 171 PFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRT 215 (348)
Q Consensus 171 ~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inlkGi~igng~~ 215 (348)
.+.|+|||=||+-+-.++....+. ...+++++++..+|.=
T Consensus 92 ~l~l~GHSrGGk~Af~~al~~~~~-----~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 92 KLALAGHSRGGKVAFAMALGNASS-----SLDLRFSALILLDPVD 131 (259)
T ss_pred ceEEeeeCCCCHHHHHHHhhhccc-----ccccceeEEEEecccc
Confidence 699999999999665555543221 1246799999888875
No 157
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=46.48 E-value=33 Score=30.42 Aligned_cols=65 Identities=23% Similarity=0.261 Sum_probs=37.5
Q ss_pred CCCceEEEe--CCCcccccccccCCCCCcCchhhHHHHHHHHHHHHhhC-CCCCCCCeEEEeecccCccHHHHHHH
Q 018994 118 KEASILFVD--SPVGTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDH-PEFISNPFYVGGDSYSGITVPALVQR 190 (348)
Q Consensus 118 ~~anllfiD--~PvG~GfSy~~~~~~~~~~d~~~a~~~~~fL~~f~~~~-p~~~~~~~yi~GESYgG~yvp~la~~ 190 (348)
+.|-|.|++ .|.+...+-... .--...|.+|..|++..=..+ |. -.+-++|||||..-+-.-+..
T Consensus 62 ~vAvV~WlgYdaP~~~~~~a~~~-----~~A~~ga~~L~~f~~gl~a~~~~~---~~~tv~GHSYGS~v~G~A~~~ 129 (177)
T PF06259_consen 62 SVAVVAWLGYDAPAGGLPDAASP-----GYARAGAPRLARFLDGLRATHGPD---AHLTVVGHSYGSTVVGLAAQQ 129 (177)
T ss_pred CeEEEEEcCCCCCCCccccccCc-----hHHHHHHHHHHHHHHHhhhhcCCC---CCEEEEEecchhHHHHHHhhh
Confidence 678889986 442222221100 011334566666666654444 22 368999999999877666554
No 158
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=44.56 E-value=51 Score=24.93 Aligned_cols=78 Identities=19% Similarity=0.212 Sum_probs=44.8
Q ss_pred eeEEEEEEecCCCCCCCCeEEEecCCCCcccccccchhcCceEEccCCCCCCCCeeeccCCCCCCCCceEEEeCCCcccc
Q 018994 54 AQLFYYFVKSDKNPKEDPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEASILFVDSPVGTGF 133 (348)
Q Consensus 54 ~~lfy~f~es~~~p~~~PlvlwlnGGPG~SS~~g~~~e~GP~~~~~~~~~g~~~~l~~n~~sW~~~anllfiD~PvG~Gf 133 (348)
.+||+...+..+. .+.+|+.++|--..|.- +.+.... |..+ -.+|+-+|+. |-|.
T Consensus 2 ~~L~~~~w~p~~~--~k~~v~i~HG~~eh~~r---y~~~a~~-------------L~~~------G~~V~~~D~r-GhG~ 56 (79)
T PF12146_consen 2 TKLFYRRWKPENP--PKAVVVIVHGFGEHSGR---YAHLAEF-------------LAEQ------GYAVFAYDHR-GHGR 56 (79)
T ss_pred cEEEEEEecCCCC--CCEEEEEeCCcHHHHHH---HHHHHHH-------------HHhC------CCEEEEECCC-cCCC
Confidence 5677755544322 68999999987444333 3332221 2112 2357778974 9999
Q ss_pred cccccCCCCCcCchhhHHHHHHHHH
Q 018994 134 SYARTPHASQTGDFKQVHHLDQFLR 158 (348)
Q Consensus 134 Sy~~~~~~~~~~d~~~a~~~~~fL~ 158 (348)
|-... .+..+-++..+|+..|++
T Consensus 57 S~g~r--g~~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 57 SEGKR--GHIDSFDDYVDDLHQFIQ 79 (79)
T ss_pred CCCcc--cccCCHHHHHHHHHHHhC
Confidence 96432 234455566677766653
No 159
>PRK07868 acyl-CoA synthetase; Validated
Probab=42.23 E-value=78 Score=35.53 Aligned_cols=38 Identities=11% Similarity=0.030 Sum_probs=26.3
Q ss_pred CCeEEEeecccCccHHHHHHHHHhhcccccCCeeeeceeEecCCccC
Q 018994 170 NPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTD 216 (348)
Q Consensus 170 ~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inlkGi~igng~~d 216 (348)
.+++++|.|.||..+-.+|..-.+ -.++++++.+..+|
T Consensus 141 ~~v~lvG~s~GG~~a~~~aa~~~~---------~~v~~lvl~~~~~d 178 (994)
T PRK07868 141 RDVHLVGYSQGGMFCYQAAAYRRS---------KDIASIVTFGSPVD 178 (994)
T ss_pred CceEEEEEChhHHHHHHHHHhcCC---------CccceEEEEecccc
Confidence 489999999999998777763111 12677776555544
No 160
>PLN02429 triosephosphate isomerase
Probab=41.52 E-value=52 Score=32.01 Aligned_cols=60 Identities=17% Similarity=0.349 Sum_probs=45.1
Q ss_pred hhHHHHHHHHHHHHhh-CCCCCCCCeEEEeecccCccHHHHHHHHHhhcccccCCeeeeceeEecCCccCcc
Q 018994 148 KQVHHLDQFLRKWLMD-HPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTDMV 218 (348)
Q Consensus 148 ~~a~~~~~fL~~f~~~-~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inlkGi~igng~~d~~ 218 (348)
+.++.+..++++|+.+ +.+-....+-|. |||-.-|.-+..|.... +++|+.||.+.+++.
T Consensus 239 e~~~~v~~~IR~~l~~~~~~~va~~irIL---YGGSV~~~N~~el~~~~--------diDG~LVGgASL~~~ 299 (315)
T PLN02429 239 QQAQEVHVAVRGWLKKNVSEEVASKTRII---YGGSVNGGNSAELAKEE--------DIDGFLVGGASLKGP 299 (315)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhccCceEE---EcCccCHHHHHHHhcCC--------CCCEEEeecceecHH
Confidence 5677888999999875 333222344454 99999999999988653 599999999998764
No 161
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=40.25 E-value=1.4e+02 Score=31.27 Aligned_cols=85 Identities=8% Similarity=-0.052 Sum_probs=49.2
Q ss_pred CceEEEeCCCcccccccccCCCCCcCchhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhccccc
Q 018994 120 ASILFVDSPVGTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDI 199 (348)
Q Consensus 120 anllfiD~PvG~GfSy~~~~~~~~~~d~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~ 199 (348)
..++-||-+ |.|.|.... . -++-+.+.+.++|....+.. ...++.++|+|.||..+...+........
T Consensus 221 f~V~~iDwr-gpg~s~~~~----~-~ddY~~~~i~~al~~v~~~~---g~~kv~lvG~cmGGtl~a~ala~~aa~~~--- 288 (532)
T TIGR01838 221 HTVFVISWR-NPDASQADK----T-FDDYIRDGVIAALEVVEAIT---GEKQVNCVGYCIGGTLLSTALAYLAARGD--- 288 (532)
T ss_pred cEEEEEECC-CCCcccccC----C-hhhhHHHHHHHHHHHHHHhc---CCCCeEEEEECcCcHHHHHHHHHHHHhCC---
Confidence 467778864 777763221 1 11223334556665554432 34589999999999987663332222110
Q ss_pred CCeeeeceeEecCCccCcc
Q 018994 200 KPLINLQGYILGNPRTDMV 218 (348)
Q Consensus 200 ~~~inlkGi~igng~~d~~ 218 (348)
.-.++++++.+..+|..
T Consensus 289 --~~rv~slvll~t~~Df~ 305 (532)
T TIGR01838 289 --DKRIKSATFFTTLLDFS 305 (532)
T ss_pred --CCccceEEEEecCcCCC
Confidence 11378888777777754
No 162
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=40.13 E-value=46 Score=32.95 Aligned_cols=56 Identities=14% Similarity=0.146 Sum_probs=38.4
Q ss_pred CCcCchhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhcccccCCeeeeceeEecC
Q 018994 142 SQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGN 212 (348)
Q Consensus 142 ~~~~d~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inlkGi~ign 212 (348)
+..++..+++...+|-. ..=.|+..++.|.|.|-||.-+.-.|.- .-++|++++-.
T Consensus 287 ~p~n~~nA~DaVvQfAI----~~Lgf~~edIilygWSIGGF~~~waAs~-----------YPdVkavvLDA 342 (517)
T KOG1553|consen 287 YPVNTLNAADAVVQFAI----QVLGFRQEDIILYGWSIGGFPVAWAASN-----------YPDVKAVVLDA 342 (517)
T ss_pred CcccchHHHHHHHHHHH----HHcCCCccceEEEEeecCCchHHHHhhc-----------CCCceEEEeec
Confidence 45566666555555443 3335666799999999999988777763 34688887743
No 163
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=39.83 E-value=45 Score=30.48 Aligned_cols=64 Identities=17% Similarity=0.203 Sum_probs=35.7
Q ss_pred hhHHHHHHHHHHHHhhC--CCCCCCCeEEEeecccCccHHHHHHHHHhhcccccCCeeeeceeE-ecCCccCcc
Q 018994 148 KQVHHLDQFLRKWLMDH--PEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYI-LGNPRTDMV 218 (348)
Q Consensus 148 ~~a~~~~~fL~~f~~~~--p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inlkGi~-igng~~d~~ 218 (348)
+.++.+.+.++..++.+ ..-..+++.|+|||.||..+=. +....+.. .-++++|+ +|.|...+.
T Consensus 61 ~q~~~~~~~i~~i~~~~~~~~~~~~~vilVgHSmGGlvar~-~l~~~~~~------~~~v~~iitl~tPh~g~~ 127 (225)
T PF07819_consen 61 RQAEFLAEAIKYILELYKSNRPPPRSVILVGHSMGGLVARS-ALSLPNYD------PDSVKTIITLGTPHRGSP 127 (225)
T ss_pred HHHHHHHHHHHHHHHhhhhccCCCCceEEEEEchhhHHHHH-HHhccccc------cccEEEEEEEcCCCCCcc
Confidence 44555666666665554 2224568999999999973333 22222211 12355655 666665543
No 164
>PF00681 Plectin: Plectin repeat; InterPro: IPR001101 Plectin may have a role in cross-linking intermediate filaments, in inter-linking intermediate filaments with microtubules and microfilaments and in anchoring intermediate filaments to the plasma and nuclear membranes. Plectin is recruited into hemidesmosomes, multiprotein complexes that facilitate adhesion of epithelia to the basement membrane, thereby providing linkage between the intracellular keratin filaments to the laminins of the extracellular matrix. Plectin binds to hemidesmosomes through association of its actin-binding domain with the first pair of fibronectin type III repeats and a small part of the connecting segment of the integrin-beta4 subunit, the latter (integrin-alpha6,beta4) acting as a receptor for the extracellular matrix component laminin-5. The plectin repeat is also seen in the cell adhesion junction plaque proteins, desmoplakin, envoplakin, and bullous pemphigoid antigen. The domains in plakins show considerable sequence homology. The N terminus consists of a plakin domain containing a number of subdomains with high alpha-helical content, while the central coiled-coil domain is composed of heptad repeats involved in the dimerisation of plakin, and the C terminus contains one or more homologous repeat sequences referred to plectin repeats []. This entry represents the plectin repeats found in the C terminus of plakin proteins.; GO: 0005856 cytoskeleton; PDB: 1LM7_A 1LM5_A.
Probab=38.03 E-value=18 Score=24.39 Aligned_cols=33 Identities=18% Similarity=0.082 Sum_probs=25.1
Q ss_pred CCccCccccccccccccccCCCCCHHHHHHHHh
Q 018994 212 NPRTDMVVEQNSQIPFAHGMGLISNELYESLKI 244 (348)
Q Consensus 212 ng~~d~~~~~~~~~~~~~~~gli~~~~~~~~~~ 244 (348)
.|.+||.....-...=|...|+||.+.+..+.+
T Consensus 11 gGiidp~tg~~lsv~~A~~~glId~~~~~~L~e 43 (45)
T PF00681_consen 11 GGIIDPETGERLSVEEAIQRGLIDSDTAQKLLE 43 (45)
T ss_dssp TSEEETTTTEEEEHHHHHHTTSS-HHHHHHHHH
T ss_pred eeEEeCCCCeEEcHHHHHHCCCcCHHHHHHHHc
Confidence 378888877666667789999999998877754
No 165
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=37.28 E-value=20 Score=32.46 Aligned_cols=56 Identities=14% Similarity=0.058 Sum_probs=37.5
Q ss_pred hHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhcccccCCeeeeceeEecCCccCcc
Q 018994 149 QVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTDMV 218 (348)
Q Consensus 149 ~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inlkGi~igng~~d~~ 218 (348)
..+++..+|++ +++-...+ ..|+|.|.||.-+-.++.+-.+. +.+++.-+|.+++.
T Consensus 98 l~~el~p~i~~---~~~~~~~~-~~i~G~S~GG~~Al~~~l~~Pd~----------F~~~~~~S~~~~~~ 153 (251)
T PF00756_consen 98 LTEELIPYIEA---NYRTDPDR-RAIAGHSMGGYGALYLALRHPDL----------FGAVIAFSGALDPS 153 (251)
T ss_dssp HHTHHHHHHHH---HSSEEECC-EEEEEETHHHHHHHHHHHHSTTT----------ESEEEEESEESETT
T ss_pred hhccchhHHHH---hcccccce-eEEeccCCCcHHHHHHHHhCccc----------cccccccCcccccc
Confidence 34445555554 34333332 89999999999888777753332 88888888887765
No 166
>KOG3877 consensus NADH:ubiquinone oxidoreductase, NDUFA10/42kDa subunit [Energy production and conversion]
Probab=37.25 E-value=41 Score=32.35 Aligned_cols=50 Identities=28% Similarity=0.577 Sum_probs=35.5
Q ss_pred CCCCCceEEEeCCCcccccccccCCCCCcCchhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCc
Q 018994 116 WTKEASILFVDSPVGTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGI 182 (348)
Q Consensus 116 W~~~anllfiD~PvG~GfSy~~~~~~~~~~d~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~ 182 (348)
.++..-||-||-|+|+|-+ ..|+++.+-|- |..||++.-..+|+ .|||+-
T Consensus 67 f~enSkvI~VeGnI~sGK~-------------klAKelAe~Lg--f~hfP~~~~d~iyv--dsyg~D 116 (393)
T KOG3877|consen 67 FHENSKVIVVEGNIGSGKT-------------KLAKELAEQLG--FVHFPEFRMDDIYV--DSYGND 116 (393)
T ss_pred hcccceEEEEeCCcccCch-------------hHHHHHHHHhC--Ccccccccccceee--cccCcc
Confidence 3445678899999999966 24455554443 67899998767777 788874
No 167
>PLN02561 triosephosphate isomerase
Probab=37.17 E-value=69 Score=30.14 Aligned_cols=59 Identities=19% Similarity=0.372 Sum_probs=44.3
Q ss_pred hhHHHHHHHHHHHHhh-CCCCCCCCeEEEeecccCccHHHHHHHHHhhcccccCCeeeeceeEecCCccCc
Q 018994 148 KQVHHLDQFLRKWLMD-HPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTDM 217 (348)
Q Consensus 148 ~~a~~~~~fL~~f~~~-~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inlkGi~igng~~d~ 217 (348)
+.+++...++++++.+ +..-....+-|. |||-.-|.-+..|... .++.|+.||.+.+|+
T Consensus 180 ~~~~~v~~~Ir~~l~~~~~~~~a~~i~IL---YGGSV~~~N~~~l~~~--------~~iDG~LVG~ASL~~ 239 (253)
T PLN02561 180 AQAQEVHDELRKWLHKNVSPEVAATTRII---YGGSVTGANCKELAAQ--------PDVDGFLVGGASLKP 239 (253)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccceEE---EeCCcCHHHHHHHhcC--------CCCCeEEEehHhhHH
Confidence 4567788889988864 432223345454 9999999999998765 359999999999986
No 168
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=36.52 E-value=53 Score=32.67 Aligned_cols=41 Identities=12% Similarity=0.202 Sum_probs=28.7
Q ss_pred hhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHH
Q 018994 148 KQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRIS 192 (348)
Q Consensus 148 ~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~ 192 (348)
+.+..+...++.-++.. ++++.|.|||+||.++-.+-....
T Consensus 101 ~~~~~lk~~ie~~~~~~----~~kv~li~HSmGgl~~~~fl~~~~ 141 (389)
T PF02450_consen 101 EYFTKLKQLIEEAYKKN----GKKVVLIAHSMGGLVARYFLQWMP 141 (389)
T ss_pred HHHHHHHHHHHHHHHhc----CCcEEEEEeCCCchHHHHHHHhcc
Confidence 34455555555544433 569999999999999887776663
No 169
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=36.10 E-value=98 Score=29.42 Aligned_cols=66 Identities=20% Similarity=0.220 Sum_probs=42.0
Q ss_pred hhHHHHHHHHHHHHhhCCC--C-CCCCeEEEeecccCccHHHHHHHHHhhcccccCCeee--eceeEecCCccCcc
Q 018994 148 KQVHHLDQFLRKWLMDHPE--F-ISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLIN--LQGYILGNPRTDMV 218 (348)
Q Consensus 148 ~~a~~~~~fL~~f~~~~p~--~-~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~in--lkGi~igng~~d~~ 218 (348)
..|..+++.++.-....+. + .+.++.|+|.|=||+=. ..|.++... -.+.++ |.|.+.|.+..|..
T Consensus 46 ~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa-~~AA~l~~~----YApeL~~~l~Gaa~gg~~~dl~ 116 (290)
T PF03583_consen 46 SEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAA-LWAAELAPS----YAPELNRDLVGAAAGGPPADLA 116 (290)
T ss_pred hHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHH-HHHHHHhHH----hCcccccceeEEeccCCccCHH
Confidence 4455555666554433332 2 35689999999988744 334444322 125688 99999999987754
No 170
>PRK00042 tpiA triosephosphate isomerase; Provisional
Probab=35.88 E-value=1e+02 Score=28.94 Aligned_cols=59 Identities=15% Similarity=0.314 Sum_probs=43.9
Q ss_pred hhHHHHHHHHHHHHhh-CCCCCCCCeEEEeecccCccHHHHHHHHHhhcccccCCeeeeceeEecCCccCcc
Q 018994 148 KQVHHLDQFLRKWLMD-HPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTDMV 218 (348)
Q Consensus 148 ~~a~~~~~fL~~f~~~-~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inlkGi~igng~~d~~ 218 (348)
+.++++..|+++++.. +. -....+-|. |||-.-|.=+..+.... ++.|+.||.+.+++.
T Consensus 180 ~~~~~v~~~Ir~~l~~~~~-~~~~~~~Il---YGGSV~~~N~~~l~~~~--------~vDG~LVG~Asl~~~ 239 (250)
T PRK00042 180 EQAQEVHAFIRAVLAELYG-EVAEKVRIL---YGGSVKPDNAAELMAQP--------DIDGALVGGASLKAE 239 (250)
T ss_pred HHHHHHHHHHHHHHHHhcc-cccCCceEE---EcCCCCHHHHHHHhcCC--------CCCEEEEeeeeechH
Confidence 5677888999998864 32 122344444 99999999999987653 599999999998764
No 171
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=35.63 E-value=74 Score=27.97 Aligned_cols=79 Identities=15% Similarity=0.255 Sum_probs=49.4
Q ss_pred EEeCCCcccccccccCCCCCcCchhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHH--HHhhcccccCC
Q 018994 124 FVDSPVGTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQR--ISNENEEDIKP 201 (348)
Q Consensus 124 fiD~PvG~GfSy~~~~~~~~~~d~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~--i~~~~~~~~~~ 201 (348)
-|+-|+..+.. .|..+...-++++...|+++..+-|. .++.|+|-|-|+..+-..+.. +... .
T Consensus 44 ~V~YpA~~~~~------~y~~S~~~G~~~~~~~i~~~~~~CP~---~kivl~GYSQGA~V~~~~~~~~~l~~~------~ 108 (179)
T PF01083_consen 44 GVEYPASLGPN------SYGDSVAAGVANLVRLIEEYAARCPN---TKIVLAGYSQGAMVVGDALSGDGLPPD------V 108 (179)
T ss_dssp E--S---SCGG------SCHHHHHHHHHHHHHHHHHHHHHSTT---SEEEEEEETHHHHHHHHHHHHTTSSHH------H
T ss_pred ecCCCCCCCcc------cccccHHHHHHHHHHHHHHHHHhCCC---CCEEEEecccccHHHHHHHHhccCChh------h
Confidence 35666665552 23345566778888999999999886 389999999999888777666 1111 0
Q ss_pred eeeece-eEecCCccCc
Q 018994 202 LINLQG-YILGNPRTDM 217 (348)
Q Consensus 202 ~inlkG-i~igng~~d~ 217 (348)
.=++.+ +.+|||.-.+
T Consensus 109 ~~~I~avvlfGdP~~~~ 125 (179)
T PF01083_consen 109 ADRIAAVVLFGDPRRGA 125 (179)
T ss_dssp HHHEEEEEEES-TTTBT
T ss_pred hhhEEEEEEecCCcccC
Confidence 123666 5678888743
No 172
>PF08139 LPAM_1: Prokaryotic membrane lipoprotein lipid attachment site; InterPro: IPR012640 In prokaryotes, membrane lipoproteins are synthesized with a precursor signal peptide, which is cleaved by a specific lipoprotein signal peptidase (signal peptidase II). The peptidase recognises a conserved sequence and cuts upstream of a cysteine residue to which a glyceride-fatty acid lipid is attached [,]. This lipid attachment site is found in homologues of the VirB proteins of type IV secretion systems (T4SS). Conjugal transfer across the cell envelope of Gram-negative bacteria is mediated by a supramolecular structure termed mating pair formation (Mpf) complex. Collectively, secretion pathways ancestrally related to bacterial conjugation systems are now known as T4SS. T4SS are involved in the delivery of effector molecules to eukaryotic target cells; each of these systems exports distinct DNA or protein substrates to effect a myriad of changes in host cell physiology during infection [].
Probab=35.56 E-value=43 Score=20.00 Aligned_cols=14 Identities=43% Similarity=0.610 Sum_probs=8.6
Q ss_pred hhhhHHHHHHHHHH
Q 018994 2 EMAKLCFSLLLLLQ 15 (348)
Q Consensus 2 ~m~~~~~~~~~~~~ 15 (348)
+|+|+++.+++++.
T Consensus 6 mmKkil~~l~a~~~ 19 (25)
T PF08139_consen 6 MMKKILFPLLALFM 19 (25)
T ss_pred HHHHHHHHHHHHHH
Confidence 46788766655443
No 173
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=33.53 E-value=54 Score=35.79 Aligned_cols=97 Identities=22% Similarity=0.346 Sum_probs=52.5
Q ss_pred CCCCCeEEEecCCCCc-------ccccccchhcCceEEccCCCCCCCCeeeccCCCCCCCCceEEEeCCCcccccccccC
Q 018994 67 PKEDPLLLWLTGGPGC-------SAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEASILFVDSPVGTGFSYARTP 139 (348)
Q Consensus 67 p~~~PlvlwlnGGPG~-------SS~~g~~~e~GP~~~~~~~~~g~~~~l~~n~~sW~~~anllfiD~PvG~GfSy~~~~ 139 (348)
++.-| ||++-|--|+ .|...+....||++-.. -.+||++. +-.-+|= .=-||--
T Consensus 87 lsGIP-VLFIPGNAGSyKQvRSiAS~a~n~y~~~~~e~t~---------~~d~~~~~----DFFaVDF--nEe~tAm--- 147 (973)
T KOG3724|consen 87 LSGIP-VLFIPGNAGSYKQVRSIASVAQNAYQGGPFEKTE---------DRDNPFSF----DFFAVDF--NEEFTAM--- 147 (973)
T ss_pred CCCce-EEEecCCCCchHHHHHHHHHHhhhhcCCchhhhh---------cccCcccc----ceEEEcc--cchhhhh---
Confidence 34445 4566776665 23345566688887432 23466665 2222330 0011100
Q ss_pred CCCCcCchhhHHHHHHHHHHH---HhhCCCCC---CCCeEEEeecccCccH
Q 018994 140 HASQTGDFKQVHHLDQFLRKW---LMDHPEFI---SNPFYVGGDSYSGITV 184 (348)
Q Consensus 140 ~~~~~~d~~~a~~~~~fL~~f---~~~~p~~~---~~~~yi~GESYgG~yv 184 (348)
.-....++++...+++..- ++.-+||+ ...+.|+|||+||..+
T Consensus 148 --~G~~l~dQtEYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVA 196 (973)
T KOG3724|consen 148 --HGHILLDQTEYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVA 196 (973)
T ss_pred --ccHhHHHHHHHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHH
Confidence 0123445666666666544 44556676 4569999999999754
No 174
>PRK15492 triosephosphate isomerase; Provisional
Probab=33.13 E-value=89 Score=29.48 Aligned_cols=59 Identities=12% Similarity=0.227 Sum_probs=44.5
Q ss_pred hhHHHHHHHHHHHHhh-CCCCCCCCeEEEeecccCccHHHHHHHHHhhcccccCCeeeeceeEecCCccCcc
Q 018994 148 KQVHHLDQFLRKWLMD-HPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTDMV 218 (348)
Q Consensus 148 ~~a~~~~~fL~~f~~~-~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inlkGi~igng~~d~~ 218 (348)
+.+++...++++++.. +-+- ...+-|. |||-.-|.-+..|.... ++.|+.||...+++.
T Consensus 189 e~~~~~~~~Ir~~l~~~~~~~-~~~irIL---YGGSV~~~N~~~l~~~~--------diDG~LvG~aSl~~~ 248 (260)
T PRK15492 189 DYADEKHAVIKQCLIELFGDA-GDDIPVF---YGGSVNAENANELFGQP--------HIDGLFIGRSAWDAD 248 (260)
T ss_pred HHHHHHHHHHHHHHHHHhccc-cCceeEE---EcCccCHHHHHHHhcCC--------CCCEEEeehhhcCHH
Confidence 4567788899998653 3222 2345555 99999999999998754 599999999998875
No 175
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=33.04 E-value=29 Score=34.52 Aligned_cols=37 Identities=19% Similarity=0.223 Sum_probs=23.0
Q ss_pred CeEEEeecccCccHHHHHHHHHhhcccccCCeeeeceeEecCCccCcc
Q 018994 171 PFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTDMV 218 (348)
Q Consensus 171 ~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inlkGi~igng~~d~~ 218 (348)
.+-++||||||--+-..+..- ..+|..++.+||.-|.
T Consensus 229 ~i~~~GHSFGGATa~~~l~~d-----------~r~~~~I~LD~W~~Pl 265 (379)
T PF03403_consen 229 RIGLAGHSFGGATALQALRQD-----------TRFKAGILLDPWMFPL 265 (379)
T ss_dssp EEEEEEETHHHHHHHHHHHH------------TT--EEEEES---TTS
T ss_pred heeeeecCchHHHHHHHHhhc-----------cCcceEEEeCCcccCC
Confidence 589999999997666444421 2378888999998775
No 176
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=30.81 E-value=77 Score=29.17 Aligned_cols=44 Identities=18% Similarity=0.170 Sum_probs=33.5
Q ss_pred hhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHH
Q 018994 147 FKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRI 191 (348)
Q Consensus 147 ~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i 191 (348)
.+...|+..++ .|+...|+.....+.++|-|+||+.+-..|...
T Consensus 90 ~~~~~d~~a~~-~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~ 133 (236)
T COG0412 90 AEVLADIDAAL-DYLARQPQVDPKRIGVVGFCMGGGLALLAATRA 133 (236)
T ss_pred HHHHHHHHHHH-HHHHhCCCCCCceEEEEEEcccHHHHHHhhccc
Confidence 45555665444 688888877777899999999999887777753
No 177
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=29.94 E-value=58 Score=28.46 Aligned_cols=39 Identities=15% Similarity=0.178 Sum_probs=27.2
Q ss_pred CCCeEEEeecccCccHHHHHHHHHhhcccccCCeeeeceeEecCCccC
Q 018994 169 SNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTD 216 (348)
Q Consensus 169 ~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inlkGi~igng~~d 216 (348)
..+.+|+|||.|+.-+-..+. .+. ..+++|+++..|.-.
T Consensus 54 ~~~~ilVaHSLGc~~~l~~l~--~~~-------~~~v~g~lLVAp~~~ 92 (171)
T PF06821_consen 54 DEPTILVAHSLGCLTALRWLA--EQS-------QKKVAGALLVAPFDP 92 (171)
T ss_dssp TTTEEEEEETHHHHHHHHHHH--HTC-------CSSEEEEEEES--SC
T ss_pred CCCeEEEEeCHHHHHHHHHHh--hcc-------cccccEEEEEcCCCc
Confidence 348999999999886655554 222 346999999999854
No 178
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=29.84 E-value=2.3e+02 Score=29.09 Aligned_cols=33 Identities=12% Similarity=0.117 Sum_probs=21.7
Q ss_pred HHHHHHHhhCCCCCCCCeEEEeecccCccHHHHH
Q 018994 155 QFLRKWLMDHPEFISNPFYVGGDSYSGITVPALV 188 (348)
Q Consensus 155 ~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la 188 (348)
+++++....|-. ..+++-|+|+|.||..|-.+.
T Consensus 181 ~wv~~~I~~FGG-dp~~vTl~G~saGa~~v~~l~ 213 (545)
T KOG1516|consen 181 RWVKDNIPSFGG-DPKNVTLFGHSAGAASVSLLT 213 (545)
T ss_pred HHHHHHHHhcCC-CCCeEEEEeechhHHHHHHHh
Confidence 444444444432 345799999999999885544
No 179
>PRK14565 triosephosphate isomerase; Provisional
Probab=29.02 E-value=1.1e+02 Score=28.50 Aligned_cols=53 Identities=15% Similarity=0.253 Sum_probs=40.8
Q ss_pred hhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhcccccCCeeeeceeEecCCccCcc
Q 018994 147 FKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTDMV 218 (348)
Q Consensus 147 ~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inlkGi~igng~~d~~ 218 (348)
.+.+++...+++++. +++-|. |||-.-|.-+..+.+.. ++.|+.||.+.+++.
T Consensus 173 ~e~i~~~~~~Ir~~~--------~~~~Il---YGGSV~~~N~~~l~~~~--------~iDG~LvG~asl~~~ 225 (237)
T PRK14565 173 NDAIAEAFEIIRSYD--------SKSHII---YGGSVNQENIRDLKSIN--------QLSGVLVGSASLDVD 225 (237)
T ss_pred HHHHHHHHHHHHHhC--------CCceEE---EcCccCHhhHHHHhcCC--------CCCEEEEechhhcHH
Confidence 356778888998863 133333 99999999999988743 499999999999865
No 180
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=28.83 E-value=93 Score=30.91 Aligned_cols=47 Identities=13% Similarity=0.209 Sum_probs=33.4
Q ss_pred CCeEEEeecccCccHHHHHHHHHhhcccccCCeeeeceeEecCCccCcc
Q 018994 170 NPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTDMV 218 (348)
Q Consensus 170 ~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inlkGi~igng~~d~~ 218 (348)
..+||..||.|.--+-....++.-++.. .....++=+++-.|-+|-.
T Consensus 191 ~~I~ilAHSMGtwl~~e~LrQLai~~~~--~l~~ki~nViLAaPDiD~D 237 (377)
T COG4782 191 KRIYLLAHSMGTWLLMEALRQLAIRADR--PLPAKIKNVILAAPDIDVD 237 (377)
T ss_pred ceEEEEEecchHHHHHHHHHHHhccCCc--chhhhhhheEeeCCCCChh
Confidence 4899999999987766666666554432 1234588888888888754
No 181
>PRK06762 hypothetical protein; Provisional
Probab=28.81 E-value=35 Score=29.01 Aligned_cols=13 Identities=23% Similarity=0.537 Sum_probs=11.9
Q ss_pred CeEEEecCCCCcc
Q 018994 71 PLLLWLTGGPGCS 83 (348)
Q Consensus 71 PlvlwlnGGPG~S 83 (348)
|.++|+.|.|||-
T Consensus 2 ~~li~i~G~~GsG 14 (166)
T PRK06762 2 TTLIIIRGNSGSG 14 (166)
T ss_pred CeEEEEECCCCCC
Confidence 7899999999996
No 182
>PF01456 Mucin: Mucin-like glycoprotein; InterPro: IPR000458 This family of trypanosomal proteins resemble vertebrate mucins. The protein consists of three regions. The N and C terminii are conserved between all members of the family, whereas the central region is not well conserved and contains a large number of threonine residues which can be glycosylated []. Indirect evidence suggested that these genes might encode the core protein of parasite mucins, glycoproteins that were proposed to be involved in the interaction with, and invasion of, mammalian host cells.
Probab=28.71 E-value=45 Score=27.99 Aligned_cols=23 Identities=26% Similarity=0.431 Sum_probs=16.4
Q ss_pred ChhhhHHHHHHHHHHHhhccccc
Q 018994 1 MEMAKLCFSLLLLLQLCMQPAAS 23 (348)
Q Consensus 1 ~~m~~~~~~~~~~~~~~~~~~~~ 23 (348)
|++-|++.++|+|.|++..+.|.
T Consensus 1 MmtcRLLCalLvlaLcCCpsvc~ 23 (143)
T PF01456_consen 1 MMTCRLLCALLVLALCCCPSVCA 23 (143)
T ss_pred CchHHHHHHHHHHHHHcCcchhc
Confidence 77889988887777765555444
No 183
>PRK13962 bifunctional phosphoglycerate kinase/triosephosphate isomerase; Provisional
Probab=28.61 E-value=1e+02 Score=33.03 Aligned_cols=61 Identities=16% Similarity=0.258 Sum_probs=45.5
Q ss_pred hhhHHHHHHHHHHHHhh-CCCCCCCCeEEEeecccCccHHHHHHHHHhhcccccCCeeeeceeEecCCccCcc
Q 018994 147 FKQVHHLDQFLRKWLMD-HPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTDMV 218 (348)
Q Consensus 147 ~~~a~~~~~fL~~f~~~-~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inlkGi~igng~~d~~ 218 (348)
.+.|++...+|++|+.. +-.-....+=|. |||-.-|.-+..|.... ++.|+.||...+++.
T Consensus 574 ~e~aqevh~~IR~~l~~~~~~~~a~~~rIl---YGGSV~~~N~~~l~~~~--------diDG~LVGgASL~~~ 635 (645)
T PRK13962 574 PEQAQEVHAFIRKLVAELYGEEAARKVRIL---YGGSVKSENAAGLFNQP--------DIDGGLVGGASLKAQ 635 (645)
T ss_pred HHHHHHHHHHHHHHHHHHhChhhhccceEE---ecCCCCHhHHHHHhcCC--------CCCeEEeehHhcCHH
Confidence 46778899999999864 322212233333 99999999999998754 599999999998875
No 184
>PF04414 tRNA_deacylase: D-aminoacyl-tRNA deacylase; InterPro: IPR007508 D-aminoacyl-tRNA deacylases hydrolyse the ester bond between the polynucleotide and the D-amino acid, thereby preventing the accumulation of such mis-acylated and metabolically inactive tRNA molecules. Several aminoacyl-tRNA synthetases have the ability to transfer the D-isomer of their amino acid onto their cognate tRNA. ; GO: 0016788 hydrolase activity, acting on ester bonds; PDB: 1YQE_A 2GFQ_B.
Probab=28.24 E-value=1.2e+02 Score=27.83 Aligned_cols=48 Identities=10% Similarity=-0.018 Sum_probs=32.7
Q ss_pred cCchhhHHHHHHHHHHHHhhCCCCCC-CCeEEEeecccCccHHHHHHHHHhh
Q 018994 144 TGDFKQVHHLDQFLRKWLMDHPEFIS-NPFYVGGDSYSGITVPALVQRISNE 194 (348)
Q Consensus 144 ~~d~~~a~~~~~fL~~f~~~~p~~~~-~~~yi~GESYgG~yvp~la~~i~~~ 194 (348)
++|..+++.+.+.+.+.+..-++-.- .++.-+| ||||.|.+...+++.
T Consensus 104 W~d~~a~~~vA~avl~~~~~~~~~~~~~~~ig~G---G~HYapr~t~~~l~~ 152 (213)
T PF04414_consen 104 WNDPDAAEAVARAVLEVLESDEKAECCPVAIGFG---GGHYAPRFTKLALET 152 (213)
T ss_dssp HT-HHHHHHHHHHHHHHHHHTTCSTT-EEEEEE----S-TT-HHHHHHHHHC
T ss_pred hCChHHHHHHHHHHHHHhcccccccccceeEEec---CcccchhhhhhhhcC
Confidence 57788888888888888877554321 3455566 899999999988875
No 185
>cd00311 TIM Triosephosphate isomerase (TIM) is a glycolytic enzyme that catalyzes the interconversion of dihydroxyacetone phosphate and D-glyceraldehyde-3-phosphate. The reaction is very efficient and requires neither cofactors nor metal ions. TIM, usually homodimeric, but in some organisms tetrameric, is ubiqitous and conserved in function across eukaryotes, bacteria and archaea.
Probab=27.83 E-value=1.4e+02 Score=27.71 Aligned_cols=59 Identities=19% Similarity=0.388 Sum_probs=44.2
Q ss_pred hhHHHHHHHHHHHHhh-CCCCCCCCeEEEeecccCccHHHHHHHHHhhcccccCCeeeeceeEecCCccCcc
Q 018994 148 KQVHHLDQFLRKWLMD-HPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTDMV 218 (348)
Q Consensus 148 ~~a~~~~~fL~~f~~~-~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inlkGi~igng~~d~~ 218 (348)
+.+++...++++++.. +.+ ....+-|. |||-.-|.=+..+.+.. ++.|+.||.+.+++.
T Consensus 176 ~~~~ev~~~ir~~l~~~~~~-~~~~~~Il---YGGSV~~~N~~~l~~~~--------~vDG~LVG~Asl~~~ 235 (242)
T cd00311 176 EQAQEVHAFIRKLLAELYGE-VAEKVRIL---YGGSVNPENAAELLAQP--------DIDGVLVGGASLKAE 235 (242)
T ss_pred HHHHHHHHHHHHHHHHhccc-ccCceeEE---ECCCCCHHHHHHHhcCC--------CCCEEEeehHhhCHH
Confidence 4567788999998875 333 33344444 99999999888888753 489999999998754
No 186
>PF15253 STIL_N: SCL-interrupting locus protein N-terminus
Probab=27.71 E-value=72 Score=32.14 Aligned_cols=36 Identities=25% Similarity=0.708 Sum_probs=26.5
Q ss_pred eeEEEEEEeCCCCCeeEEEEEEecCCCCCCCCeE-EEecC
Q 018994 40 ELETGYVGVGESEEAQLFYYFVKSDKNPKEDPLL-LWLTG 78 (348)
Q Consensus 40 ~~~sGyl~v~~~~~~~lfy~f~es~~~p~~~Plv-lwlnG 78 (348)
....|||+++. .+++.. ..|+.....+.||| +||.|
T Consensus 199 ~~k~GfLTmDq--tRkl~l-LlesDpk~~slPLVGiWlsG 235 (410)
T PF15253_consen 199 TYKSGFLTMDQ--TRKLLL-LLESDPKASSLPLVGIWLSG 235 (410)
T ss_pred ccccceeeEcc--ccceEE-EeccCCCccCCCceeeEecC
Confidence 35799999987 466776 66776556676776 88885
No 187
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=26.99 E-value=1.4e+02 Score=26.59 Aligned_cols=36 Identities=22% Similarity=0.322 Sum_probs=27.3
Q ss_pred CCCeEEEeecccCccHHHHHHHHHhhcccccCCeeeeceeEecCCc
Q 018994 169 SNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPR 214 (348)
Q Consensus 169 ~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inlkGi~igng~ 214 (348)
.+|.||++||-|+.-+...+.++.. .++|+++..|.
T Consensus 58 ~~~~vlVAHSLGc~~v~h~~~~~~~----------~V~GalLVApp 93 (181)
T COG3545 58 EGPVVLVAHSLGCATVAHWAEHIQR----------QVAGALLVAPP 93 (181)
T ss_pred CCCeEEEEecccHHHHHHHHHhhhh----------ccceEEEecCC
Confidence 4589999999998766666665543 38898887765
No 188
>PTZ00333 triosephosphate isomerase; Provisional
Probab=26.64 E-value=1.3e+02 Score=28.30 Aligned_cols=60 Identities=17% Similarity=0.396 Sum_probs=44.0
Q ss_pred hhhHHHHHHHHHHHHhh-CCCCCCCCeEEEeecccCccHHHHHHHHHhhcccccCCeeeeceeEecCCccCc
Q 018994 147 FKQVHHLDQFLRKWLMD-HPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTDM 217 (348)
Q Consensus 147 ~~~a~~~~~fL~~f~~~-~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inlkGi~igng~~d~ 217 (348)
.+.+++...++++++.+ +.......+-|. |||-.-|.-+..|.... ++.|+.||.+.+++
T Consensus 182 ~e~i~~~~~~IR~~l~~~~~~~~~~~~~IL---YGGSV~~~N~~~l~~~~--------~vDG~LvG~asl~~ 242 (255)
T PTZ00333 182 PEQAQEVHAFIRKWLAEKVGADVAEATRII---YGGSVNEKNCKELIKQP--------DIDGFLVGGASLKP 242 (255)
T ss_pred HHHHHHHHHHHHHHHHHhhcccccccceEE---EcCCCCHHHHHHHhcCC--------CCCEEEEehHhhhh
Confidence 35677888999998764 332223334444 99999999999987653 59999999998873
No 189
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=26.18 E-value=1.8e+02 Score=27.01 Aligned_cols=44 Identities=18% Similarity=0.294 Sum_probs=26.5
Q ss_pred CchhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhh
Q 018994 145 GDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNE 194 (348)
Q Consensus 145 ~d~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~ 194 (348)
+..+.|...|..+. .|. +...+|++-+||||---..+..+....
T Consensus 171 t~veh~~yvw~~~v-----~pa-~~~sv~vvahsyGG~~t~~l~~~f~~d 214 (297)
T KOG3967|consen 171 TPVEHAKYVWKNIV-----LPA-KAESVFVVAHSYGGSLTLDLVERFPDD 214 (297)
T ss_pred chHHHHHHHHHHHh-----ccc-CcceEEEEEeccCChhHHHHHHhcCCc
Confidence 44444554444432 233 344899999999998666665554443
No 190
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=26.00 E-value=55 Score=29.05 Aligned_cols=41 Identities=20% Similarity=0.182 Sum_probs=29.6
Q ss_pred hhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHH
Q 018994 148 KQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQ 189 (348)
Q Consensus 148 ~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~ 189 (348)
...+++. ....|+...|+....++-++|-|+||.++-.+|.
T Consensus 77 ~~~~~~~-aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~ 117 (218)
T PF01738_consen 77 QVAADLQ-AAVDYLRAQPEVDPGKIGVVGFCWGGKLALLLAA 117 (218)
T ss_dssp HHHHHHH-HHHHHHHCTTTCEEEEEEEEEETHHHHHHHHHHC
T ss_pred HHHHHHH-HHHHHHHhccccCCCcEEEEEEecchHHhhhhhh
Confidence 3444443 3346777888766779999999999988776654
No 191
>PF15613 WHIM2: WSTF, HB1, Itc1p, MBD9 motif 2
Probab=25.98 E-value=1.3e+02 Score=19.70 Aligned_cols=28 Identities=18% Similarity=0.336 Sum_probs=12.9
Q ss_pred eeEEEEEEecCCCCCCCCeEEEecCCCC
Q 018994 54 AQLFYYFVKSDKNPKEDPLLLWLTGGPG 81 (348)
Q Consensus 54 ~~lfy~f~es~~~p~~~PlvlwlnGGPG 81 (348)
.+-+|||..+........--+|+.+||+
T Consensus 11 ~NrYwwf~~s~~~~~~~~~~~~v~~~~~ 38 (38)
T PF15613_consen 11 GNRYWWFSSSSSNSQYYNGGRFVEQGPD 38 (38)
T ss_pred CceEEEEecccccCCCCCceEEEEeCCC
Confidence 3456677444433233333444455554
No 192
>PF09292 Neil1-DNA_bind: Endonuclease VIII-like 1, DNA bind; InterPro: IPR015371 This domain is predominantly found in Endonuclease VIII-like 1 proteins and adopts a glucocorticoid receptor-like fold. Structural analysis reveals a zincless finger motif that is required for glycosylase activity []. ; PDB: 1TDH_A.
Probab=25.96 E-value=40 Score=22.09 Aligned_cols=11 Identities=36% Similarity=1.054 Sum_probs=5.8
Q ss_pred CeEEEecCCCC
Q 018994 71 PLLLWLTGGPG 81 (348)
Q Consensus 71 PlvlwlnGGPG 81 (348)
--.||+.|-||
T Consensus 25 gRTiWFqGdPG 35 (39)
T PF09292_consen 25 GRTIWFQGDPG 35 (39)
T ss_dssp S-EEEESS---
T ss_pred CCEEEeeCCCC
Confidence 44789999887
No 193
>PHA03376 BARF1; Provisional
Probab=25.83 E-value=1.5e+02 Score=26.99 Aligned_cols=65 Identities=23% Similarity=0.231 Sum_probs=33.4
Q ss_pred hhhHHHHHHHHHHHhhcccccCCccccCCCCCCCCCceeEEEEEEeCCCCCeeEEEEEEecCCCCCCCCeEEEecCC
Q 018994 3 MAKLCFSLLLLLQLCMQPAASHSTVKFLPGFQGPLPFELETGYVGVGESEEAQLFYYFVKSDKNPKEDPLLLWLTGG 79 (348)
Q Consensus 3 m~~~~~~~~~~~~~~~~~~~~~~~v~~lpg~~~~~~~~~~sGyl~v~~~~~~~lfy~f~es~~~p~~~PlvlwlnGG 79 (348)
|+|+++.+|+|..++ |+...|+.+=|-+. .....|-+.... ...--||+ +..|.+.+++|..+||
T Consensus 1 ~~~~~~~Ll~La~l~----~sg~pVta~VGEda----~LsC~lnp~ssa-~~MrIrWq---Ks~p~~~~VvL~~~gg 65 (221)
T PHA03376 1 MARFIAQLLLLASCV----AAGQAVTAFLGERV----TLTSYWRRVSLG-PEIEVSWF---KLGPGEEQVLIGRMHH 65 (221)
T ss_pred ChhHHHHHHHHHHHh----ccCcchhheeCCcE----EEEecccCccCC-CceEEEEE---ecCCCCCCEEEEEcCC
Confidence 566655444433333 22235666655321 223444434322 23344665 4446677899999887
No 194
>PRK03995 hypothetical protein; Provisional
Probab=25.63 E-value=1.3e+02 Score=28.64 Aligned_cols=48 Identities=13% Similarity=-0.043 Sum_probs=32.0
Q ss_pred cCchhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhh
Q 018994 144 TGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNE 194 (348)
Q Consensus 144 ~~d~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~ 194 (348)
++|..+++.+.+++...+..-+.=...++.-+| ||||.|.+...+++.
T Consensus 156 W~d~~a~~~vA~avl~~l~~~~~~~~~~~iGiG---GgHYapr~T~~~l~~ 203 (267)
T PRK03995 156 WKNERAGEILAEAVIEVLDSIEYEKFKPAIGIG---GGHYAPKFTKLALES 203 (267)
T ss_pred hCCcHHHHHHHHHHHHHHhcccccCCCEEEEEC---CCCccHHHHHHHhhC
Confidence 566677777888887776532111222444466 899999999988764
No 195
>PF04446 Thg1: tRNAHis guanylyltransferase; InterPro: IPR007537 The Thg1 protein from Saccharomyces cerevisiae (Baker's yeast) is responsible for adding a GMP residue to the 5' end of tRNA His [].; PDB: 3OTE_A 3OTC_A 3OTD_A 3OTB_A.
Probab=25.49 E-value=87 Score=26.51 Aligned_cols=50 Identities=18% Similarity=0.362 Sum_probs=35.1
Q ss_pred eEEEeCCCcccccccccCCCCC-cCchhhHHHHHHHHHHHHhhCCCCCCCCeEEEeec
Q 018994 122 ILFVDSPVGTGFSYARTPHASQ-TGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDS 178 (348)
Q Consensus 122 llfiD~PvG~GfSy~~~~~~~~-~~d~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GES 178 (348)
||=|| |.||+.-.....+. -+|....+.+.+.-+..++.+++ ..+..|+|
T Consensus 23 vvRiD---G~~F~kft~~~~f~KP~D~r~~~~M~~aa~~l~~~~~~----~~~aY~~S 73 (135)
T PF04446_consen 23 VVRID---GRGFHKFTKRHGFEKPNDERFLKAMNEAAKALMEEFPD----IVLAYGQS 73 (135)
T ss_dssp EEEEE---ETTHHHHHHHTT--SS--HHHHHHHHHHHHHHHHHSSS----EEEEEEET
T ss_pred EEEEe---CcchhhhcccCCCCCCCCHHHHHHHHHHHHHHHHhCCC----cEEEEEcC
Confidence 78899 99999765443343 36778888888888888888873 66777766
No 196
>PF07389 DUF1500: Protein of unknown function (DUF1500); InterPro: IPR009974 This family consists of several Orthopoxvirus specific proteins, which include Vaccinia virus, B6 protein, they are around 100 residues in length. The function of this family is unknown.
Probab=24.46 E-value=56 Score=25.62 Aligned_cols=26 Identities=27% Similarity=0.498 Sum_probs=21.5
Q ss_pred HHHHHHHHHHhhCCCCCCCCeEEEeecc
Q 018994 152 HLDQFLRKWLMDHPEFISNPFYVGGDSY 179 (348)
Q Consensus 152 ~~~~fL~~f~~~~p~~~~~~~yi~GESY 179 (348)
+++++.+.|+-+| |..+.|.+-|+||
T Consensus 8 dIYDAvRaflLr~--Y~~KrfIV~g~S~ 33 (100)
T PF07389_consen 8 DIYDAVRAFLLRH--YYDKRFIVYGRSN 33 (100)
T ss_pred hHHHHHHHHHHHH--HccceEEEecchH
Confidence 6888888888774 5566899999999
No 197
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=23.93 E-value=88 Score=30.41 Aligned_cols=53 Identities=19% Similarity=0.093 Sum_probs=35.3
Q ss_pred ceEEEeCCCcccccccccCCCCCcCchhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccC
Q 018994 121 SILFVDSPVGTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSG 181 (348)
Q Consensus 121 nllfiD~PvG~GfSy~~~~~~~~~~d~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG 181 (348)
.+.-||. .--|.|-.... .+-...|+|+..||...-. .++..+..|.|||.||
T Consensus 82 ~v~~vd~-RnHG~Sp~~~~----h~~~~ma~dv~~Fi~~v~~---~~~~~~~~l~GHsmGG 134 (315)
T KOG2382|consen 82 DVYAVDV-RNHGSSPKITV----HNYEAMAEDVKLFIDGVGG---STRLDPVVLLGHSMGG 134 (315)
T ss_pred ceEEEec-ccCCCCccccc----cCHHHHHHHHHHHHHHccc---ccccCCceecccCcch
Confidence 5666774 45677743332 3445678888888765332 2455699999999999
No 198
>COG4425 Predicted membrane protein [Function unknown]
Probab=23.81 E-value=1e+02 Score=31.66 Aligned_cols=37 Identities=14% Similarity=0.229 Sum_probs=30.8
Q ss_pred chhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCc
Q 018994 146 DFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGI 182 (348)
Q Consensus 146 d~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~ 182 (348)
-.++|+.+.+++-.+.++-|+=..-++|+.|||-|..
T Consensus 373 g~~aa~aLf~aVy~yw~qLP~~sRPKLylhG~SLGa~ 409 (588)
T COG4425 373 GADAARALFEAVYGYWTQLPKSSRPKLYLHGESLGAM 409 (588)
T ss_pred chhHHHHHHHHHHHHHHhCCcCCCCceEEeccccccc
Confidence 3578899999999999999986666799999998744
No 199
>COG5510 Predicted small secreted protein [Function unknown]
Probab=23.68 E-value=57 Score=22.12 Aligned_cols=21 Identities=29% Similarity=0.377 Sum_probs=9.8
Q ss_pred hhh-HHHHHHHHHHHhhccccc
Q 018994 3 MAK-LCFSLLLLLQLCMQPAAS 23 (348)
Q Consensus 3 m~~-~~~~~~~~~~~~~~~~~~ 23 (348)
|++ +++.+++++.+.+.++|.
T Consensus 2 mk~t~l~i~~vll~s~llaaCN 23 (44)
T COG5510 2 MKKTILLIALVLLASTLLAACN 23 (44)
T ss_pred chHHHHHHHHHHHHHHHHHHhh
Confidence 555 333333444444566664
No 200
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=23.47 E-value=69 Score=26.93 Aligned_cols=17 Identities=29% Similarity=0.479 Sum_probs=14.6
Q ss_pred CCCCCeEEEecCCCCcc
Q 018994 67 PKEDPLLLWLTGGPGCS 83 (348)
Q Consensus 67 p~~~PlvlwlnGGPG~S 83 (348)
..++||||=|+|.||+.
T Consensus 49 ~p~KpLVlSfHG~tGtG 65 (127)
T PF06309_consen 49 NPRKPLVLSFHGWTGTG 65 (127)
T ss_pred CCCCCEEEEeecCCCCc
Confidence 45679999999999984
No 201
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=22.80 E-value=52 Score=28.58 Aligned_cols=14 Identities=36% Similarity=0.854 Sum_probs=11.4
Q ss_pred CCeEEEecCCCCcc
Q 018994 70 DPLLLWLTGGPGCS 83 (348)
Q Consensus 70 ~PlvlwlnGGPG~S 83 (348)
+|.+|||.|=||+-
T Consensus 1 ~g~vIwltGlsGsG 14 (156)
T PF01583_consen 1 KGFVIWLTGLSGSG 14 (156)
T ss_dssp S-EEEEEESSTTSS
T ss_pred CCEEEEEECCCCCC
Confidence 48999999999974
No 202
>PF08194 DIM: DIM protein; InterPro: IPR013172 Drosophila immune-induced molecules (DIMs) are short proteins induced during the immune response of Drosophila []. This entry includes DIMs 1 to 4 and DIM23.
Probab=22.33 E-value=91 Score=20.31 Aligned_cols=15 Identities=40% Similarity=0.529 Sum_probs=6.2
Q ss_pred hhhhHHHHHHHHHHH
Q 018994 2 EMAKLCFSLLLLLQL 16 (348)
Q Consensus 2 ~m~~~~~~~~~~~~~ 16 (348)
+...+++++++|.++
T Consensus 2 k~l~~a~~l~lLal~ 16 (36)
T PF08194_consen 2 KCLSLAFALLLLALA 16 (36)
T ss_pred ceeHHHHHHHHHHHH
Confidence 333444444444433
No 203
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=22.28 E-value=58 Score=28.89 Aligned_cols=28 Identities=18% Similarity=0.465 Sum_probs=23.1
Q ss_pred CCCCCCeEEEeecccCccHHHHHHHHHh
Q 018994 166 EFISNPFYVGGDSYSGITVPALVQRISN 193 (348)
Q Consensus 166 ~~~~~~~yi~GESYgG~yvp~la~~i~~ 193 (348)
....-|+.|-|.||||.....+|..+..
T Consensus 85 ~l~~gpLi~GGkSmGGR~aSmvade~~A 112 (213)
T COG3571 85 GLAEGPLIIGGKSMGGRVASMVADELQA 112 (213)
T ss_pred cccCCceeeccccccchHHHHHHHhhcC
Confidence 4555699999999999999888887654
No 204
>COG1647 Esterase/lipase [General function prediction only]
Probab=22.03 E-value=2.5e+02 Score=26.18 Aligned_cols=52 Identities=13% Similarity=0.082 Sum_probs=36.3
Q ss_pred hhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhcccccCCeeeeceeEecCCccCcc
Q 018994 148 KQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTDMV 218 (348)
Q Consensus 148 ~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inlkGi~igng~~d~~ 218 (348)
+.+.+-|..|.+ -.| ..++++|-|.||...-.||. ..++|+|+.-.+-+...
T Consensus 70 ~~v~d~Y~~L~~-----~gy--~eI~v~GlSmGGv~alkla~------------~~p~K~iv~m~a~~~~k 121 (243)
T COG1647 70 EDVEDGYRDLKE-----AGY--DEIAVVGLSMGGVFALKLAY------------HYPPKKIVPMCAPVNVK 121 (243)
T ss_pred HHHHHHHHHHHH-----cCC--CeEEEEeecchhHHHHHHHh------------hCCccceeeecCCcccc
Confidence 344555555541 244 37999999999998877776 35699999877766543
No 205
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=21.47 E-value=2.2e+02 Score=29.59 Aligned_cols=69 Identities=14% Similarity=0.107 Sum_probs=43.3
Q ss_pred CceEEEeCCCcccccccccCCC---C-CcCchhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHH
Q 018994 120 ASILFVDSPVGTGFSYARTPHA---S-QTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQ 189 (348)
Q Consensus 120 anllfiD~PvG~GfSy~~~~~~---~-~~~d~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~ 189 (348)
|.|+.+|. .=.|-|.....-. . .-+..|+-.|+.+|++.-=.+|+.-.+.|++.+|-||.|....=+-.
T Consensus 119 A~v~~lEH-RFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~ 191 (514)
T KOG2182|consen 119 ATVFQLEH-RFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAMNAKFNFSDDSKWITFGGSYSGSLSAWFRE 191 (514)
T ss_pred CeeEEeee-eccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHHHhhcCCCCCCCeEEECCCchhHHHHHHHH
Confidence 56777775 2345443221111 1 12456777889999887667777655568999999999875544433
No 206
>PF10929 DUF2811: Protein of unknown function (DUF2811); InterPro: IPR021231 This is a bacterial family of uncharacterised proteins.
Probab=21.11 E-value=94 Score=22.38 Aligned_cols=22 Identities=18% Similarity=0.425 Sum_probs=18.6
Q ss_pred hhHHHHHHHHHHHHhhCCCCCC
Q 018994 148 KQVHHLDQFLRKWLMDHPEFIS 169 (348)
Q Consensus 148 ~~a~~~~~fL~~f~~~~p~~~~ 169 (348)
+.-+++.+.|++|++.||.|..
T Consensus 5 eiPe~L~~~m~~fie~hP~WDQ 26 (57)
T PF10929_consen 5 EIPEDLHQAMKDFIETHPNWDQ 26 (57)
T ss_pred cccHHHHHHHHHHHHcCCCchH
Confidence 3446899999999999999965
No 207
>cd01853 Toc34_like Toc34-like (Translocon at the Outer-envelope membrane of Chloroplasts). This family contains several Toc proteins, including Toc34, Toc33, Toc120, Toc159, Toc86, Toc125, and Toc90. The Toc complex at the outer envelope membrane of chloroplasts is a molecular machine of ~500 kDa that contains a single Toc159 protein, four Toc75 molecules, and four or five copies of Toc34. Toc64 and Toc12 are associated with the translocon, but do not appear to be part of the core complex. The Toc translocon initiates the import of nuclear-encoded preproteins from the cytosol into the organelle. Toc34 and Toc159 are both GTPases, while Toc75 is a beta-barrel integral membrane protein. Toc159 is equally distributed between a soluble cytoplasmic form and a membrane-inserted form, suggesting that assembly of the Toc complex is dynamic. Toc34 and Toc75 act sequentially to mediate docking and insertion of Toc159 resulting in assembly of the functional translocon.
Probab=20.81 E-value=5.1e+02 Score=23.98 Aligned_cols=99 Identities=13% Similarity=0.102 Sum_probs=49.4
Q ss_pred CCCCCCeEEEecCCCCc--cccc-ccchhcCceEEccCCCCCCCCeeeccCCCCCCCCceEEEeCCCcccccccccCCCC
Q 018994 66 NPKEDPLLLWLTGGPGC--SAFS-GLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEASILFVDSPVGTGFSYARTPHAS 142 (348)
Q Consensus 66 ~p~~~PlvlwlnGGPG~--SS~~-g~~~e~GP~~~~~~~~~g~~~~l~~n~~sW~~~anllfiD~PvG~GfSy~~~~~~~ 142 (348)
.....|+-|.|-|-+|+ ||+. .++.+-. +.+.. ..+.......-...|.. ..+.+||.| |.+.+-.
T Consensus 26 ~~~~~~~~IllvG~tGvGKSSliNaLlg~~~-~~v~~--~~~~T~~~~~~~~~~~g-~~i~vIDTP-Gl~~~~~------ 94 (249)
T cd01853 26 EELDFSLTILVLGKTGVGKSSTINSIFGERK-AATSA--FQSETLRVREVSGTVDG-FKLNIIDTP-GLLESVM------ 94 (249)
T ss_pred hhccCCeEEEEECCCCCcHHHHHHHHhCCCC-cccCC--CCCceEEEEEEEEEECC-eEEEEEECC-CcCcchh------
Confidence 34577899999998888 5665 3343321 11211 11110112222223333 578999998 7664411
Q ss_pred CcCchhhHHHHHHHHHHHHhhCCCCCCCCeEEEeecccCc
Q 018994 143 QTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGI 182 (348)
Q Consensus 143 ~~~d~~~a~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~ 182 (348)
+....+.....+..|+.+. .-+++|+-......
T Consensus 95 ---~~~~~~~~~~~I~~~l~~~----~idvIL~V~rlD~~ 127 (249)
T cd01853 95 ---DQRVNRKILSSIKRYLKKK----TPDVVLYVDRLDMY 127 (249)
T ss_pred ---hHHHHHHHHHHHHHHHhcc----CCCEEEEEEcCCCC
Confidence 1122233445555565432 23667766655543
No 208
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=20.59 E-value=2.8e+02 Score=27.29 Aligned_cols=77 Identities=12% Similarity=0.181 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHhhCCCCCCCCeEEEeecccCccHHHHHHHHHhhcccccCCeeeeceeEecCCccCcccccccccccccc
Q 018994 151 HHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTDMVVEQNSQIPFAHG 230 (348)
Q Consensus 151 ~~~~~fL~~f~~~~p~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inlkGi~igng~~d~~~~~~~~~~~~~~ 230 (348)
+..-..|-+.+....+ -.||+-|+|+|-|+.-|=.-...+.++... .+--.-++||.|...
T Consensus 202 ~~aG~~LA~~L~~~~~-G~RpVtLvG~SLGarvI~~cL~~L~~~~~~----~lVe~VvL~Gapv~~-------------- 262 (345)
T PF05277_consen 202 EKAGKVLADALLSRNQ-GERPVTLVGHSLGARVIYYCLLELAERKAF----GLVENVVLMGAPVPS-------------- 262 (345)
T ss_pred HHHHHHHHHHHHHhcC-CCCceEEEeecccHHHHHHHHHHHHhcccc----CeEeeEEEecCCCCC--------------
Confidence 3333444444444333 667999999999999998888888876321 222234556655543
Q ss_pred CCCCCHHHHHHHHhHhcCCC
Q 018994 231 MGLISNELYESLKITCGGEY 250 (348)
Q Consensus 231 ~gli~~~~~~~~~~~C~~~y 250 (348)
+.+.|+.+++.-.+.+
T Consensus 263 ----~~~~W~~~r~vVsGr~ 278 (345)
T PF05277_consen 263 ----DPEEWRKIRSVVSGRL 278 (345)
T ss_pred ----CHHHHHHHHHHccCeE
Confidence 3446777766555543
No 209
>PF15169 DUF4564: Domain of unknown function (DUF4564)
Probab=20.48 E-value=1.3e+02 Score=27.03 Aligned_cols=45 Identities=27% Similarity=0.427 Sum_probs=32.7
Q ss_pred CCceEEEeCCCcccccccccCCCCCcCchhhHHHHHHHHHHHHhhCCC
Q 018994 119 EASILFVDSPVGTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPE 166 (348)
Q Consensus 119 ~anllfiD~PvG~GfSy~~~~~~~~~~d~~~a~~~~~fL~~f~~~~p~ 166 (348)
....|+++ .-+|||++-+.+. ..++.+.++++...|.+|+..++-
T Consensus 122 ~g~~v~L~--f~tG~siPLTqsa-~~G~~~dve~IA~~I~~FL~l~~~ 166 (187)
T PF15169_consen 122 KGYLVVLR--FATGFSIPLTQSA-TLGDRSDVEAIAKLINKFLELNPL 166 (187)
T ss_pred cceEEEEE--ccCCcceeccceE-EecCchHHHHHHHHHHHHHhhccc
Confidence 34556677 3579999877653 345667788899999999987653
Done!