BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 018995
         (348 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q6B855|TKT_BOVIN Transketolase OS=Bos taurus GN=TKT PE=2 SV=1
          Length = 623

 Score = 34.3 bits (77), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 10/65 (15%)

Query: 232 RLIAMVEAERTYHQRVL------QILDQLEGEMLSERQRIEAAPTAPTPSVDT----MPP 281
           R I  +E + ++H + L      QI+ ++ G++ S+++ +   P    PSVD     MP 
Sbjct: 246 RGITGIEDKESWHGKPLPKNMADQIIQEISGQIQSKKKILATPPEEDAPSVDITNIRMPT 305

Query: 282 PPAYE 286
           PP Y+
Sbjct: 306 PPNYK 310


>sp|Q99963|SH3G3_HUMAN Endophilin-A3 OS=Homo sapiens GN=SH3GL3 PE=1 SV=1
          Length = 347

 Score = 34.3 bits (77), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 25/106 (23%), Positives = 48/106 (45%), Gaps = 5/106 (4%)

Query: 230 LQRLIAMVEAERTYHQRVLQILDQLEGEMLSERQRIEAAPTAPTPSVDTMPPPPAYEEVN 289
           + +L   +EA   YH++  +IL +L+ ++   + RI AA + P       P   +  E+N
Sbjct: 212 VSQLAVFIEAALDYHRQSTEILQELQSKL---QMRISAASSVPRREYKPRPVKRSSSELN 268

Query: 290 GIYASQT--HNGSTDAMGYFLGEVVHPYQAESDVELTLSVGDYVVV 333
           G+  +      GS   M       ++ ++ E+  EL    GD + +
Sbjct: 269 GVSTTSVVKTTGSNIPMDQPCCRGLYDFEPENQGELGFKEGDIITL 314


>sp|A4G8D2|DNAK_HERAR Chaperone protein DnaK OS=Herminiimonas arsenicoxydans GN=dnaK PE=3
           SV=1
          Length = 649

 Score = 33.9 bits (76), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 30/109 (27%), Positives = 53/109 (48%), Gaps = 14/109 (12%)

Query: 103 SGNTLSKAALSYGRARAQMEKERGNLLKALGTQVAEPLRAMVLGAPLDDARHLAQRYDRM 162
           +G  LSK A++  R +A  E+ +  L  +  T++ EP  AM  GAP+    HL  +  R 
Sbjct: 249 NGLDLSKDAIALQRIKASAERAKIELSSSQQTEINEPYIAMANGAPV----HLTMKITRA 304

Query: 163 RQEAEAQAIEVSKRQAKVRETPGNPDLALKLDAAEVKLHDLKSNMAILG 211
           + E+  + + +SK  A          L++ +  A VK+ D+   + + G
Sbjct: 305 KLESLVEEL-ISKTLAP---------LSIAIKDAGVKVSDIDDIILVGG 343


>sp|P97814|PPIP1_MOUSE Proline-serine-threonine phosphatase-interacting protein 1 OS=Mus
           musculus GN=Pstpip1 PE=1 SV=1
          Length = 415

 Score = 33.5 bits (75), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 10/70 (14%)

Query: 269 PTAPTPSVDTMPPPPAYEEVNGIYAS-----QTHNGSTDAMGYFLGEVVHPYQAESDVEL 323
           P+AP  S +T+ P P   E+  +YAS        N ++ A  Y     ++ Y A++  EL
Sbjct: 323 PSAPAASTETLTPTPERNEL--VYASIEVQATQGNLNSSAQDY---RALYDYTAQNSDEL 377

Query: 324 TLSVGDYVVV 333
            +S GD + V
Sbjct: 378 DISAGDILAV 387


>sp|Q8ZAL8|RMUC_YERPE DNA recombination protein RmuC homolog OS=Yersinia pestis GN=rmuC
           PE=3 SV=1
          Length = 477

 Score = 33.5 bits (75), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 6/60 (10%)

Query: 91  DSRKYGSDNTCTSGNTLSKAALSYGRARAQMEKERGNL------LKALGTQVAEPLRAMV 144
           D  +   D+  + G +L KA LSY +A  ++ + RGNL       + LG +V  P+  ++
Sbjct: 391 DKVRLFVDDMASLGQSLDKAQLSYHQAMNKLSQGRGNLVGQVESFRTLGVEVKRPISPLL 450


>sp|A6T226|DNAK_JANMA Chaperone protein DnaK OS=Janthinobacterium sp. (strain Marseille)
           GN=dnaK PE=3 SV=1
          Length = 650

 Score = 32.3 bits (72), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 4/64 (6%)

Query: 103 SGNTLSKAALSYGRARAQMEKERGNLLKALGTQVAEPLRAMVLGAPLDDARHLAQRYDRM 162
           +G  LSK A++  R +A  E+ +  L  +  T++ EP  AM  GAP+    HL  +  R 
Sbjct: 249 NGLDLSKDAIALQRIKASAERAKIELSSSQQTEINEPYIAMANGAPV----HLNLKITRA 304

Query: 163 RQEA 166
           + E+
Sbjct: 305 KLES 308


>sp|P12076|HSP71_LEIMA Heat shock 70-related protein 1, mitochondrial OS=Leishmania major
           GN=HSP70.1 PE=3 SV=3
          Length = 634

 Score = 32.0 bits (71), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 4/68 (5%)

Query: 102 TSGNTLSKAALSYGRARAQMEKERGNLLKALGTQVAEPLRAMVLGAPLDDARHLAQRYDR 161
           TSG  LSK  ++  R R   EK +  L  A+ T+V  P     + A  D A+H+  R  R
Sbjct: 267 TSGIDLSKERMALQRVREAAEKAKCELSSAMETEVNLPF----ITANADGAQHIQMRISR 322

Query: 162 MRQEAEAQ 169
            + E   Q
Sbjct: 323 SKFEGITQ 330


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.314    0.130    0.353 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 121,149,778
Number of Sequences: 539616
Number of extensions: 4979795
Number of successful extensions: 17021
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 205
Number of HSP's that attempted gapping in prelim test: 16925
Number of HSP's gapped (non-prelim): 298
length of query: 348
length of database: 191,569,459
effective HSP length: 118
effective length of query: 230
effective length of database: 127,894,771
effective search space: 29415797330
effective search space used: 29415797330
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 62 (28.5 bits)