Your job contains 1 sequence.
>019002
MAGLLAWAADVVKAHKDDDDDEDAINSSIPLVFTEEQQKYVRELDQKAASLSRLIRDLRL
RLPPPDISQRLPHLHAHSLAYSAALSQQLSSHSSTREQTQLREVTLQEENAAYEKAISSC
ESRIQEKIQEADSLRRKLKEMDEMENNLASELDKVQTAMNTSKSGKFTESILADKAGVDT
DALRSDIAEKLEVKKKELSSMEERVQELEKKWAQVQNDALKQPSPAQREKMLNKQLHSLI
EQLEVKQTQAEGLVSEIHLKEKELETLNGLRRRIEGSNVEEDTARNRLRRVTSDRGSAST
DYLVDDSQKLPYHTGGNETLYKLMLLRSSFVLYILALHIAVFIKISF
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 019002
(347 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2146052 - symbol:AT5G15880 "AT5G15880" species... 691 4.4e-68 1
UNIPROTKB|E1BQX8 - symbol:E1BQX8 "Uncharacterized protein... 128 3.5e-05 1
DICTYBASE|DDB_G0268498 - symbol:DDB_G0268498 "unknown" sp... 124 0.00011 1
UNIPROTKB|Q27991 - symbol:MYH10 "Myosin-10" species:9913 ... 125 0.00023 1
WB|WBGene00006754 - symbol:unc-15 species:6239 "Caenorhab... 119 0.00043 1
RGD|1311640 - symbol:Cep290 "centrosomal protein 290" spe... 118 0.00043 1
UNIPROTKB|F1REW5 - symbol:CLIP1 "Uncharacterized protein"... 120 0.00048 1
UNIPROTKB|F5H0N7 - symbol:CLIP1 "CAP-Gly domain-containin... 118 0.00066 1
RGD|67404 - symbol:Clip1 "CAP-GLY domain containing linke... 119 0.00069 1
UNIPROTKB|F1MAH8 - symbol:Clip1 "Protein Clip1" species:1... 119 0.00069 1
>TAIR|locus:2146052 [details] [associations]
symbol:AT5G15880 "AT5G15880" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0030244 "cellulose biosynthetic
process" evidence=RCA] [GO:0048193 "Golgi vesicle transport"
evidence=RCA] EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AL391145
UniGene:At.43291 UniGene:At.66717 EMBL:AY099605 EMBL:BT008833
IPI:IPI00541867 PIR:T51371 RefSeq:NP_197092.1 PRIDE:Q9LFT2
EnsemblPlants:AT5G15880.1 GeneID:831445 KEGG:ath:AT5G15880
TAIR:At5g15880 eggNOG:NOG301664 HOGENOM:HOG000084669
InParanoid:Q9LFT2 OMA:LPHLHAH PhylomeDB:Q9LFT2
ProtClustDB:CLSN2686107 ArrayExpress:Q9LFT2 Genevestigator:Q9LFT2
Uniprot:Q9LFT2
Length = 348
Score = 691 (248.3 bits), Expect = 4.4e-68, P = 4.4e-68
Identities = 156/324 (48%), Positives = 194/324 (59%)
Query: 29 IPLVFTEEQQKYVRELDQKAAXXXXXXXXXXXXXXXXXXXQRLPXXXXXXXXXXXXXXXX 88
IPLVFTEEQQKYV EL +KA QRLP
Sbjct: 26 IPLVFTEEQQKYVDELGRKATNLSRSIQDLRLRLPPPDISQRLPDLHAHSLASNAALTLQ 85
Query: 89 XXXXXXTREQTQLREVTLQEENAAYEKAISSCESRIQEKIQEADSLRRKLKEMDEMENNL 148
TREQ +RE TL EEN+AYE AIS+CE++I+EK EADSL RKLKE++ +E NL
Sbjct: 86 LDSHSATREQAHMREQTLLEENSAYENAISTCETKIEEKRNEADSLLRKLKELEAVEENL 145
Query: 149 ASELDKVQTAMNTSKSGKFTESILAD----KAGVDTDALRSDIAXXXXXXXXXXXXXXXR 204
+E D Q +++ +S +E+++ K G DT+A++S + +
Sbjct: 146 KTEQDNAQASLDARQSKSSSETVIQPDGNGKDGADTEAMKSFMLEKLESKKNDMSLMEEK 205
Query: 205 VQELEKKWAQVQNDALKQPSPAQREKMLNKQLHSLIEQLEVKQTQAEGLVSEIHLKEKEL 264
VQ+LE+ WA +Q ALKQPSPAQREK L+KQLHSLIEQL KQ QAEG+V EIHL E EL
Sbjct: 206 VQDLERSWAVIQERALKQPSPAQREKTLDKQLHSLIEQLAAKQAQAEGIVGEIHLNEMEL 265
Query: 265 ETLNGLRRRIEGSNVEEDTARNRLRRVTSDRGSASTDYLVDDSQKLPYHTGG-NETLYKL 323
E LN L RR E NVE + ARNR +R SDR S D+ VD LPY + N T +L
Sbjct: 266 ERLNNLWRRYESFNVEGNAARNRFKRTNSDREFTS-DHEVDGHSYLPYSSATRNGTQTRL 324
Query: 324 MLLRSSFVLYILALHIAVFIKISF 347
M LRS+FV+YILAL + VFI+ISF
Sbjct: 325 MYLRSAFVVYILALQVLVFIRISF 348
>UNIPROTKB|E1BQX8 [details] [associations]
symbol:E1BQX8 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000042 "protein targeting to Golgi"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005802 "trans-Golgi network" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] InterPro:IPR000237
Pfam:PF01465 PROSITE:PS50913 SMART:SM00755 GO:GO:0005794
GO:GO:0048471 GO:GO:0005802 GO:GO:0000042 Gene3D:1.10.220.60
GeneTree:ENSGT00530000064371 EMBL:AADN02026319 IPI:IPI00575107
Ensembl:ENSGALT00000001514 OMA:QEQNEAH Uniprot:E1BQX8
Length = 772
Score = 128 (50.1 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 53/210 (25%), Positives = 101/210 (48%)
Query: 97 EQTQLREVTLQEENAAYEKAIS---SCESRIQEKIQEADSLRRKLKEMDEMENNLASELD 153
E+++L E LQE+ ++ EK + S + +QE ++E SL +KL DE + ++
Sbjct: 288 ERSKLIE-QLQEKVSSLEKKLERNLSGDEHVQELLKEKASLEQKL---DETSQQILTDRM 343
Query: 154 KVQTAMNTSKSGKFTESILADKAGVDTDALRSDIAXXXXXXXXXXXXXXXRVQ-ELEKKW 212
MN ++ E L +K + T+AL+ ++Q ++E +
Sbjct: 344 HHANGMNQLETQN-RE--LEEKLQIATEALKMS-----KEAASEQDLKIQKLQMDVENER 395
Query: 213 AQVQNDALKQPSP-AQREKMLNKQLHSLIEQLEVKQTQAEGLVSEIHLKEKELETLNGLR 271
+++Q L + Q+ L Q+ +L E +T A+ +S++ EKE E LNG R
Sbjct: 396 SKLQQQVLSEKHQYEQKISELESQIAALQTAWEFDKTAAQHKISQL---EKENENLNGSR 452
Query: 272 RRIEGSNVEEDTARNRLRRVTSDRGSASTD 301
E S ++++ N+L++ S R + +T+
Sbjct: 453 EEYESSLKKQESVLNKLKKELSSRETVNTE 482
>DICTYBASE|DDB_G0268498 [details] [associations]
symbol:DDB_G0268498 "unknown" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0044351
"macropinocytosis" evidence=RCA] dictyBase:DDB_G0268498
EMBL:AAFI02000003 RefSeq:XP_647221.2 PRIDE:Q55GG3
EnsemblProtists:DDB0267075 GeneID:8616025 KEGG:ddi:DDB_G0268498
eggNOG:NOG251847 OMA:AVESEQN ProtClustDB:CLSZ2430893 Uniprot:Q55GG3
Length = 818
Score = 124 (48.7 bits), Expect = 0.00011, P = 0.00011
Identities = 43/196 (21%), Positives = 92/196 (46%)
Query: 102 REVTLQEENAAYEKAISSCESRIQEKIQEADSLRRKLKEMDEMENNLASELDKVQTAMNT 161
RE T Q+ N YE +SSC I+ + + SLR K+ E+ + ++L ++ +++Q+ N
Sbjct: 374 RESTSQQ-NEQYEGRLSSCNQEIESQSVQLKSLRGKVDEVCHLLSSLKAQHEELQSNYNV 432
Query: 162 SKSGKFTESILADKAGVDTDALRSDIAXXXXXXXXXXXXXXXRVQELEKKWAQVQNDALK 221
K+ K +++ D + ++ + +LEK+ A ++ + L+
Sbjct: 433 CKAEKEQLEQQLEESTNDVQEFKLKLSTAKSAAVESEQNFTAMIAQLEKEKAIIKEEVLR 492
Query: 222 QPSPAQREKMLNKQLHSLIEQLEVKQTQAEGLVSEIHLKEKELETLNGLRRRIEGSN--V 279
S ++E + + SL V TQ + +S + ++KEL L+ + +E V
Sbjct: 493 ATS--EKEDT-EENVKSLQASQAVLVTQLQDDISSL-TRDKELLALSMQKATLERKEAVV 548
Query: 280 EEDTARNRLRRVTSDR 295
++ A ++ + S++
Sbjct: 549 LQEKAEKKMVEMQSEK 564
>UNIPROTKB|Q27991 [details] [associations]
symbol:MYH10 "Myosin-10" species:9913 "Bos taurus"
[GO:0006930 "substrate-dependent cell migration, cell extension"
evidence=ISS] [GO:0006887 "exocytosis" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0001778 "plasma membrane repair"
evidence=ISS] [GO:0001764 "neuron migration" evidence=ISS]
[GO:0001725 "stress fiber" evidence=ISS] [GO:0060041 "retina
development in camera-type eye" evidence=IEA] [GO:0055015
"ventricular cardiac muscle cell development" evidence=IEA]
[GO:0055003 "cardiac myofibril assembly" evidence=IEA] [GO:0051015
"actin filament binding" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0043531 "ADP
binding" evidence=IEA] [GO:0043197 "dendritic spine" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0032154
"cleavage furrow" evidence=IEA] [GO:0031594 "neuromuscular
junction" evidence=IEA] [GO:0030898 "actin-dependent ATPase
activity" evidence=IEA] [GO:0030496 "midbody" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0030424 "axon"
evidence=IEA] [GO:0030048 "actin filament-based movement"
evidence=IEA] [GO:0021680 "cerebellar Purkinje cell layer
development" evidence=IEA] [GO:0021678 "third ventricle
development" evidence=IEA] [GO:0021670 "lateral ventricle
development" evidence=IEA] [GO:0021592 "fourth ventricle
development" evidence=IEA] [GO:0016460 "myosin II complex"
evidence=IEA] [GO:0008360 "regulation of cell shape" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0007512 "adult
heart development" evidence=IEA] [GO:0007411 "axon guidance"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IEA]
[GO:0005938 "cell cortex" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0000281 "cytokinesis after mitosis" evidence=IEA] [GO:0000146
"microfilament motor activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005516 "calmodulin binding"
evidence=IEA] InterPro:IPR000048 InterPro:IPR001609
InterPro:IPR002928 InterPro:IPR004009 InterPro:IPR008989
Pfam:PF00063 Pfam:PF00612 Pfam:PF01576 Pfam:PF02736 PRINTS:PR00193
PROSITE:PS50096 SMART:SM00015 SMART:SM00242 GO:GO:0005886
GO:GO:0005524 GO:GO:0005938 GO:GO:0005737 GO:GO:0007411
GO:GO:0001764 GO:GO:0005819 GO:GO:0008360 GO:GO:0008283
GO:GO:0030424 GO:GO:0043025 GO:GO:0001701 GO:GO:0043197
GO:GO:0031594 GO:GO:0050885 GO:GO:0043531 GO:GO:0030426
GO:GO:0060041 GO:GO:0000281 GO:GO:0000146 GO:GO:0001725
GO:GO:0055003 GO:GO:0006887 GO:GO:0007512 GO:GO:0030496
GO:GO:0032154 GO:GO:0030048 GO:GO:0021670 GO:GO:0007097
eggNOG:COG5022 GO:GO:0055015 GO:GO:0021680 GO:GO:0001778
GO:GO:0006930 GO:GO:0021678 GO:GO:0021592 GO:GO:0016460
GO:GO:0030898 EMBL:AB022023 EMBL:U15716 IPI:IPI00709219
RefSeq:NP_777259.1 UniGene:Bt.4057 UniGene:Bt.92698
ProteinModelPortal:Q27991 SMR:Q27991 STRING:Q27991 PRIDE:Q27991
Ensembl:ENSBTAT00000028188 GeneID:317655 KEGG:bta:317655 CTD:4628
GeneTree:ENSGT00650000092896 HOGENOM:HOG000173958
HOVERGEN:HBG004704 InParanoid:Q27991 KO:K10352 OMA:DKNVHEL
OrthoDB:EOG4TXBR1 NextBio:20807131 SUPFAM:SSF50084 Uniprot:Q27991
Length = 1976
Score = 125 (49.1 bits), Expect = 0.00023, P = 0.00023
Identities = 56/214 (26%), Positives = 97/214 (45%)
Query: 106 LQEENAAYEKAISSCESRIQE---KIQEADSLRRKLKEMDEMENNLASELDKVQTAMNTS 162
LQ+ A E ++++QE K+ E D LR E+ E N L +ELD V T + +
Sbjct: 1243 LQQVKAESEHKRKKLDAQVQELHAKVSEGDRLR---VELAEKANKLQNELDNVSTLLEEA 1299
Query: 163 -KSG-KFTESILADKAGVDTDALRSDIAXXXXXXXXXXXXXXXRVQELEKKWAQVQNDAL 220
K G KF + D AG+++ D R+++LE++ + +Q
Sbjct: 1300 EKKGIKFAK----DAAGLESQL--QDTQELLQEETRQKLNLSSRIRQLEEERSSLQE--- 1350
Query: 221 KQPSPAQREKMLNKQLHSLIEQLEVKQTQAE---GLVSEIH-LKEKELETLNGLRRRIEG 276
+Q + + L KQL +L QL + + + G + + K+K L+ + L +R+E
Sbjct: 1351 QQEEEEEARRSLEKQLQALQAQLTDTKKKVDDDLGTIENLEEAKKKLLKDVEVLSQRLE- 1409
Query: 277 SNVEEDTARNRLRRVTSDRGSASTDYLVD-DSQK 309
E+ A ++L + + D LVD D Q+
Sbjct: 1410 ---EKALAYDKLEKTKTRLQQELDDLLVDLDHQR 1440
>WB|WBGene00006754 [details] [associations]
symbol:unc-15 species:6239 "Caenorhabditis elegans"
[GO:0003774 "motor activity" evidence=IEA] [GO:0016459 "myosin
complex" evidence=IEA] [GO:0004553 "hydrolase activity, hydrolyzing
O-glycosyl compounds" evidence=IEA] [GO:0005975 "carbohydrate
metabolic process" evidence=IEA] [GO:0018991 "oviposition"
evidence=IMP] [GO:0040011 "locomotion" evidence=IGI;IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0010171
"body morphogenesis" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0071688 "striated muscle
myosin thick filament assembly" evidence=IMP] [GO:0040015 "negative
regulation of multicellular organism growth" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0030241 "skeletal muscle myosin thick filament assembly"
evidence=IGI;IMP] [GO:0051493 "regulation of cytoskeleton
organization" evidence=IGI;IMP] [GO:0032982 "myosin filament"
evidence=IDA] [GO:0008092 "cytoskeletal protein binding"
evidence=IPI] InterPro:IPR002928 Pfam:PF01576 GO:GO:0006898
GO:GO:0040007 GO:GO:0018991 GO:GO:0002119 GO:GO:0010171
GO:GO:0040011 GO:GO:0030016 GO:GO:0040035 eggNOG:NOG12793
GO:GO:0040015 GO:GO:0051493 GO:GO:0003774 GO:GO:0030241 EMBL:Z79694
EMBL:Z72506 GO:GO:0032982 EMBL:X08068 PIR:S04027 PIR:T19296
RefSeq:NP_492085.1 ProteinModelPortal:P10567 SMR:P10567
DIP:DIP-24443N IntAct:P10567 MINT:MINT-116776 STRING:P10567
PaxDb:P10567 PRIDE:P10567 GeneID:172491 KEGG:cel:CELE_F07A5.7
UCSC:F07A5.7.1 CTD:172491 WormBase:F07A5.7a HOGENOM:HOG000267003
InParanoid:P10567 NextBio:875741 ArrayExpress:P10567 Uniprot:P10567
Length = 882
Score = 119 (46.9 bits), Expect = 0.00043, P = 0.00043
Identities = 42/171 (24%), Positives = 79/171 (46%)
Query: 129 QEADSLRRKLKEMDEMENNLASELDKVQTAMNTSKSGKFTESILADKAGVDTDALRSDIA 188
Q+ + RR+L++ + + L S+L +VQ +++ ++ ESI A + ++I
Sbjct: 253 QQLEEARRRLEDAERERSQLQSQLHQVQLELDSVRTALDEESIARSDAEHKLNLANTEIT 312
Query: 189 XXXXXXXXXXXXXXXRVQELEKKWAQVQNDALKQPS-PAQREKMLNK---QLHSLIEQLE 244
V++L KK Q Q + +Q Q+ L K +L S +E L
Sbjct: 313 QWKSKFDAEVALHHEEVEDLRKKMLQKQAEYEEQIEIMLQKISQLEKAKSRLQSEVEVLI 372
Query: 245 VKQTQAEGLVSEIHLKEKELETLNG-LRRRIEGSNVEEDTARNRLRRVTSD 294
V +A+ ++ + ++LE G L+ RI+ VE + A+ LR V ++
Sbjct: 373 VDLEKAQNTIALLERAREQLERQVGELKVRIDEITVELEAAQRELRAVNAE 423
>RGD|1311640 [details] [associations]
symbol:Cep290 "centrosomal protein 290" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0005829 "cytosol" evidence=ISO] [GO:0007163
"establishment or maintenance of cell polarity" evidence=ISO]
[GO:0009986 "cell surface" evidence=ISO] [GO:0015031 "protein
transport" evidence=ISO] [GO:0030814 "regulation of cAMP metabolic
process" evidence=ISO] [GO:0032391 "photoreceptor connecting
cilium" evidence=ISO] [GO:0036038 "TCTN-B9D complex" evidence=ISO]
[GO:0042384 "cilium assembly" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0060041 "retina development in camera-type eye" evidence=ISO]
[GO:0060271 "cilium morphogenesis" evidence=IEA;ISO] [GO:0051011
"microtubule minus-end binding" evidence=ISO] [GO:0000930
"gamma-tubulin complex" evidence=ISO] InterPro:IPR026201
RGD:1311640 GO:GO:0005634 GO:GO:0005813 GO:GO:0060271
PANTHER:PTHR18879 IPI:IPI00387908 Ensembl:ENSRNOT00000009239
UCSC:RGD:1311640 ArrayExpress:D4A7U7 Uniprot:D4A7U7
Length = 719
Score = 118 (46.6 bits), Expect = 0.00043, P = 0.00043
Identities = 53/214 (24%), Positives = 95/214 (44%)
Query: 99 TQLREVTLQEENAAYEKAISSCESRIQEKIQEADSLRRKLKEMDEMENNLASELDKVQTA 158
T +E L + E+ +S+I++ + L+ LK EN+LA +L+ +
Sbjct: 223 TSQKEANLNVQQVV-ERHTKELKSQIEDLNENLLKLKEALKTSKNKENSLADDLNDLNNE 281
Query: 159 MNTSKSGKFTESILADKAGVD--TDALRSDIAXXXXXXXXXXXXXXXR--VQELEKKWAQ 214
+ K K IL +K G+D D LR I + + EL+KK +
Sbjct: 282 LQ--KKQKAYNKILREKDGIDQENDELRRQIKRLSSGLQSKTLIDNKQSLIDELQKKVKK 339
Query: 215 VQNDALKQPSPAQREKMLNKQ-LHSLIEQLEVK--QTQAEGLVSEIHLKEKELETLNGLR 271
+++ +Q + + K LI E K QT+ EG+ ++ LKEKE E ++ L
Sbjct: 340 LESQLERQVDDVDIKPIKEKSGKEELIRWEEGKKWQTKVEGMRNK--LKEKEGE-VHSLT 396
Query: 272 RRIEGSNVEEDTARNRLRRVTSDRGSASTDYLVD 305
+++ S ++E A+ ++T + +T VD
Sbjct: 397 KQL--STLKELFAKADKEKLTLQKKLKTTGMTVD 428
>UNIPROTKB|F1REW5 [details] [associations]
symbol:CLIP1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051010 "microtubule plus-end binding" evidence=IEA]
[GO:0044354 "macropinosome" evidence=IEA] [GO:0035371 "microtubule
plus end" evidence=IEA] [GO:0031116 "positive regulation of
microtubule polymerization" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005881 "cytoplasmic microtubule"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0001578
"microtubule bundle formation" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR000938 InterPro:IPR001878
SMART:SM00343 Pfam:PF01302 GO:GO:0005813 GO:GO:0008270
GO:GO:0003676 GO:GO:0044354 GO:GO:0001578 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GO:GO:0005881 GO:GO:0035371 GO:GO:0031116
GeneTree:ENSGT00700000104055 EMBL:FP565737 OMA:DSKQTNE
Ensembl:ENSSSCT00000010735 Uniprot:F1REW5
Length = 1204
Score = 120 (47.3 bits), Expect = 0.00048, P = 0.00048
Identities = 52/220 (23%), Positives = 96/220 (43%)
Query: 98 QTQLREVTLQEENAAYEKAISSCESRIQEKIQEADSLRRKLKEM-------DEMENNLAS 150
Q L EV+ +E A EK + + + + +EA S++R ++E +E N L+S
Sbjct: 600 QENLSEVSQVKE--ALEKELQILKEKFADASEEAVSVQRSMQETVNQLHQKEEQFNALSS 657
Query: 151 ELDKVQTAMNTSKSGKFTESILADKAGVDT-DALRSDIAXXXXXXXXXXXXXXXRVQELE 209
EL+K++ + T KF E ++ + + L +DIA EL
Sbjct: 658 ELEKLRENL-TDMEAKFRERDEREEQLIKAKEKLENDIAEIMKMSGDHSSQLTKMNDELR 716
Query: 210 KKWAQVQNDALKQPSPAQREKMLNKQLHSLIEQLEVKQTQAEGLVSEIHLKEKELETLNG 269
K V+ LK + L K + + L+ +Q+Q E K++ L+ L+
Sbjct: 717 LKERNVEELQLKLTKANENASFLQKSIGEVT--LKAEQSQQEAAKKHEEEKKELLQKLSD 774
Query: 270 LRRRIEGSNVEEDTARNRLRRVTSDRGSASTDYLVDDSQK 309
L +++E S+ E + R +S+ A + ++ + QK
Sbjct: 775 LEKKMEMSHNECQDLKARYEEASSE-AKAKHEEVLQNLQK 813
>UNIPROTKB|F5H0N7 [details] [associations]
symbol:CLIP1 "CAP-Gly domain-containing linker protein 1"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR001878
SMART:SM00343 GO:GO:0005737 GO:GO:0008270 GO:GO:0003676
HGNC:HGNC:10461 ChiTaRS:CLIP1 EMBL:AC048338 EMBL:AC127002
EMBL:AC079406 EMBL:AC093016 IPI:IPI01013425 Ensembl:ENST00000545889
UCSC:uc001ucj.1 ArrayExpress:F5H0N7 Bgee:F5H0N7 Uniprot:F5H0N7
Length = 1013
Score = 118 (46.6 bits), Expect = 0.00066, P = 0.00066
Identities = 51/194 (26%), Positives = 84/194 (43%)
Query: 106 LQEENAAYEKAISSCESRI--QEKIQEADSLRRKLKEMDEMENNLASELDKVQTAMNTSK 163
LQE EK + E + Q +QE + KL + +E N L+S+L+K++ +
Sbjct: 425 LQEAEIKKEKFAEASEEAVSVQRSMQETVN---KLHQKEEQFNMLSSDLEKLRENL-ADM 480
Query: 164 SGKFTESILADKAGVDT-DALRSDIAXXXXXXXXXXXXXXXRVQELEKKWAQVQNDALKQ 222
KF E ++ + + L +DIA EL K V+ LK
Sbjct: 481 EAKFREKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERDVEELQLKL 540
Query: 223 PSPAQREKMLNKQLHSLIEQLEVKQTQAEGLVSEIHLKEK-ELET-LNGLRRRIEGSNVE 280
+ L K IE + VK Q++ ++ H +EK ELE L+ L +++E S+ +
Sbjct: 541 TKANENASFLQKS----IEDMTVKAEQSQQEAAKKHEEEKKELERKLSDLEKKMETSHNQ 596
Query: 281 EDTARNRLRRVTSD 294
+ R R TS+
Sbjct: 597 CQELKARYERATSE 610
>RGD|67404 [details] [associations]
symbol:Clip1 "CAP-GLY domain containing linker protein 1"
species:10116 "Rattus norvegicus" [GO:0001578 "microtubule bundle
formation" evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005874 "microtubule" evidence=ISO] [GO:0005881
"cytoplasmic microtubule" evidence=ISO] [GO:0008017 "microtubule
binding" evidence=ISO;TAS] [GO:0008270 "zinc ion binding"
evidence=ISO] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0015631 "tubulin binding" evidence=ISO] [GO:0031116 "positive
regulation of microtubule polymerization" evidence=ISO] [GO:0035371
"microtubule plus end" evidence=ISO] [GO:0051010 "microtubule
plus-end binding" evidence=ISO] [GO:0044354 "macropinosome"
evidence=ISO] InterPro:IPR000938 InterPro:IPR001878 SMART:SM00343
Pfam:PF01302 RGD:67404 GO:GO:0042803 GO:GO:0008270 GO:GO:0003676
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845
PROSITE:PS50245 GO:GO:0005881 GO:GO:0051010 CTD:6249
HOGENOM:HOG000092755 HOVERGEN:HBG007123 KO:K10421 HSSP:Q20728
IPI:IPI00201975 RefSeq:NP_113933.2 UniGene:Rn.22069 GeneID:65201
KEGG:rno:65201 NextBio:614156 EMBL:AJ237670
ProteinModelPortal:Q9JK25 SMR:Q9JK25 IntAct:Q9JK25 MINT:MINT-2738141
STRING:Q9JK25 PhosphoSite:Q9JK25 PRIDE:Q9JK25 UCSC:RGD:67404
ArrayExpress:Q9JK25 Genevestigator:Q9JK25 Uniprot:Q9JK25
Length = 1320
Score = 119 (46.9 bits), Expect = 0.00069, P = 0.00069
Identities = 51/208 (24%), Positives = 92/208 (44%)
Query: 106 LQEENAAYEKAISSCESRIQEKIQEADSLRRKLKEMDEMENNLASELDKVQTAMNTSKSG 165
LQE EK S+ E + + D++ KL + +E N L+SEL+K++ + T
Sbjct: 723 LQEAEIKKEKFASASEEAVSTQTSMQDTVN-KLHQKEEQFNMLSSELEKLRENL-TDMEA 780
Query: 166 KFTESILADKAGVDT-DALRSDIAXXXXXXXXXXXXXXXRVQELEKKWAQVQNDALKQPS 224
KF E + V + L +DIA EL K V+ LK
Sbjct: 781 KFKEKDEREDQLVKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERSVEELQLKLTK 840
Query: 225 PAQREKMLNKQLHSLIEQLEVKQTQAEGLVSEIHLKEK-ELET-LNGLRRRIEGSNVEED 282
+ +L K + + L+ +Q+Q E ++ H +EK ELE L L +++E S+ +
Sbjct: 841 ANENASLLQKSIGEVT--LKAEQSQQEA--AKKHEEEKKELENKLLELEKKMETSHYQCQ 896
Query: 283 TARNRLRRVTSDRGSASTDYLVDDSQKL 310
+ + + +S+ + ++ + QK+
Sbjct: 897 DLKAKYEKASSET-KIKHEEILQNFQKM 923
>UNIPROTKB|F1MAH8 [details] [associations]
symbol:Clip1 "Protein Clip1" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR000938
InterPro:IPR001878 SMART:SM00343 Pfam:PF01302 RGD:67404
GO:GO:0008270 GO:GO:0003676 Gene3D:2.30.30.190 SMART:SM01052
SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GeneTree:ENSGT00700000104055 CTD:6249 KO:K10421 IPI:IPI00201975
RefSeq:NP_113933.2 UniGene:Rn.22069 PRIDE:F1MAH8
Ensembl:ENSRNOT00000001685 GeneID:65201 KEGG:rno:65201
NextBio:614156 ArrayExpress:F1MAH8 Uniprot:F1MAH8
Length = 1320
Score = 119 (46.9 bits), Expect = 0.00069, P = 0.00069
Identities = 51/208 (24%), Positives = 92/208 (44%)
Query: 106 LQEENAAYEKAISSCESRIQEKIQEADSLRRKLKEMDEMENNLASELDKVQTAMNTSKSG 165
LQE EK S+ E + + D++ KL + +E N L+SEL+K++ + T
Sbjct: 723 LQEAEIKKEKFASASEEAVSTQTSMQDTVN-KLHQKEEQFNMLSSELEKLRENL-TDMEA 780
Query: 166 KFTESILADKAGVDT-DALRSDIAXXXXXXXXXXXXXXXRVQELEKKWAQVQNDALKQPS 224
KF E + V + L +DIA EL K V+ LK
Sbjct: 781 KFKEKDEREDQLVKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERSVEELQLKLTK 840
Query: 225 PAQREKMLNKQLHSLIEQLEVKQTQAEGLVSEIHLKEK-ELET-LNGLRRRIEGSNVEED 282
+ +L K + + L+ +Q+Q E ++ H +EK ELE L L +++E S+ +
Sbjct: 841 ANENASLLQKSIGEVT--LKAEQSQQEA--AKKHEEEKKELENKLLELEKKMETSHYQCQ 896
Query: 283 TARNRLRRVTSDRGSASTDYLVDDSQKL 310
+ + + +S+ + ++ + QK+
Sbjct: 897 DLKAKYEKASSET-KIKHEEILQNFQKM 923
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.312 0.127 0.330 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 347 272 0.00099 114 3 10 23 0.41 34
32 0.40 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 10
No. of states in DFA: 608 (65 KB)
Total size of DFA: 234 KB (2128 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 42.84u 0.12s 42.96t Elapsed: 00:00:02
Total cpu time: 42.85u 0.12s 42.97t Elapsed: 00:00:02
Start: Fri May 10 15:23:32 2013 End: Fri May 10 15:23:34 2013