Query 019003
Match_columns 347
No_of_seqs 147 out of 211
Neff 2.8
Searched_HMMs 13730
Date Mon Mar 25 09:23:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019003.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/019003hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1ob1c2 g.3.11.4 (C:46-96) Mer 11.6 34 0.0025 23.6 0.9 23 127-149 27-50 (51)
2 d2iida2 d.16.1.5 (A:320-432) L 7.4 62 0.0045 22.1 0.9 12 23-34 11-22 (113)
3 d1v8fa_ c.26.1.4 (A:) Pantothe 7.0 54 0.0039 28.3 0.5 9 176-184 49-57 (276)
4 d1xjua_ d.2.1.3 (A:) Endolysin 6.9 1.2E+02 0.0086 22.8 2.4 27 177-203 129-155 (158)
5 d2cura2 g.39.1.3 (A:8-32) Four 6.7 74 0.0054 19.2 0.9 15 17-31 7-23 (26)
6 d1ihoa_ c.26.1.4 (A:) Pantothe 5.8 64 0.0046 27.9 0.2 10 176-185 54-63 (282)
7 d2d8za1 g.39.1.3 (A:8-32) Four 5.1 87 0.0064 18.9 0.5 14 18-31 8-23 (26)
8 d2a84a1 c.26.1.4 (A:3-288) Pan 4.9 69 0.0051 27.6 -0.1 11 176-186 63-73 (286)
9 d1y7ua1 d.38.1.1 (A:8-171) Acy 4.9 3.1E+02 0.023 20.8 3.9 25 181-205 135-159 (164)
10 d2v5za2 d.16.1.5 (A:290-401) M 4.1 1E+02 0.0075 20.8 0.3 12 23-34 11-22 (112)
No 1
>d1ob1c2 g.3.11.4 (C:46-96) Merozoite surface protein 1 (MSP-1) {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}
Probab=11.65 E-value=34 Score=23.64 Aligned_cols=23 Identities=22% Similarity=0.621 Sum_probs=17.5
Q ss_pred cccccc-CCCCCCCcccccccccC
Q 019003 127 HSIACA-SNPYQDPYYGGMMAAYG 149 (347)
Q Consensus 127 ~sia~~-~~py~Dpyygg~~aaYg 149 (347)
.-|+|. .-|-..|||.|+|-+|-
T Consensus 27 kkIvC~Ck~p~~~~~~~GVFCS~~ 50 (51)
T d1ob1c2 27 KKITCECTKPDSYPLFDGIFCSHH 50 (51)
T ss_dssp CCCEEEECSTTCCEEGGGTEECCC
T ss_pred ceEEEEecCCCCCcccceEEeecc
Confidence 345666 66888899999998773
No 2
>d2iida2 d.16.1.5 (A:320-432) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}
Probab=7.42 E-value=62 Score=22.14 Aligned_cols=12 Identities=25% Similarity=0.645 Sum_probs=9.6
Q ss_pred ccccccccccCC
Q 019003 23 AYTEPWWRGVGY 34 (347)
Q Consensus 23 ~~s~PWW~~~g~ 34 (347)
.|.+|||+..|.
T Consensus 11 ~f~~~FW~~~g~ 22 (113)
T d2iida2 11 TCTTKFWEDDGI 22 (113)
T ss_dssp EESSCGGGGGTC
T ss_pred EcCCCCCCCcCC
Confidence 478999997764
No 3
>d1v8fa_ c.26.1.4 (A:) Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) {Thermus thermophilus [TaxId: 274]}
Probab=7.04 E-value=54 Score=28.25 Aligned_cols=9 Identities=44% Similarity=0.818 Sum_probs=7.5
Q ss_pred ceeechhhh
Q 019003 176 PVYVNAKQY 184 (347)
Q Consensus 176 PvyVNaKQY 184 (347)
.|||||.||
T Consensus 49 SIFVNP~QF 57 (276)
T d1v8fa_ 49 SVFVNPLQF 57 (276)
T ss_dssp EECCCGGGC
T ss_pred EEEecCccC
Confidence 679999994
No 4
>d1xjua_ d.2.1.3 (A:) Endolysin Lyz {Bacteriophage P1 [TaxId: 10678]}
Probab=6.89 E-value=1.2e+02 Score=22.79 Aligned_cols=27 Identities=22% Similarity=0.211 Sum_probs=19.8
Q ss_pred eeechhhhHHHHHHHHHHHHHHHhhhh
Q 019003 177 VYVNAKQYMGILRRRQARAKAELEKKL 203 (347)
Q Consensus 177 vyVNaKQY~rIlrRRq~Rak~e~~~kl 203 (347)
++.+-|-..++.+||++.+++=+++.+
T Consensus 129 ~~~~g~~~~GL~~RR~~E~~L~l~g~~ 155 (158)
T d1xjua_ 129 VNSNGVPLRGLKIRREKERQLCLTGLV 155 (158)
T ss_dssp CEETTEECHHHHHHHHHHHHHHHTTTS
T ss_pred HhcCCEEChhHHHHHHHHHHHHHcccc
Confidence 334445678999999999888777653
No 5
>d2cura2 g.39.1.3 (A:8-32) Four and a half LIM domains protein 1, FHL-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=6.75 E-value=74 Score=19.22 Aligned_cols=15 Identities=40% Similarity=0.959 Sum_probs=9.7
Q ss_pred CCCCCCc-cc-cccccc
Q 019003 17 AIPPGAA-YT-EPWWRG 31 (347)
Q Consensus 17 ~~~~~~~-~s-~PWW~~ 31 (347)
.+.++.| |- |||.|.
T Consensus 7 ~ItsGGvtY~~qPWH~e 23 (26)
T d2cura2 7 AITSGGITYQDQPWHAD 23 (26)
T ss_dssp CCCTTCEEETTEEECTT
T ss_pred eEecCceeecCCcchhh
Confidence 3556655 55 899873
No 6
>d1ihoa_ c.26.1.4 (A:) Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) {Escherichia coli [TaxId: 562]}
Probab=5.77 E-value=64 Score=27.88 Aligned_cols=10 Identities=30% Similarity=0.650 Sum_probs=8.3
Q ss_pred ceeechhhhH
Q 019003 176 PVYVNAKQYM 185 (347)
Q Consensus 176 PvyVNaKQY~ 185 (347)
.|||||.||.
T Consensus 54 SIFVNP~QF~ 63 (282)
T d1ihoa_ 54 SIFVNPMQFD 63 (282)
T ss_dssp EECCCGGGCS
T ss_pred EEEecCccCc
Confidence 6899998864
No 7
>d2d8za1 g.39.1.3 (A:8-32) Four and a half LIM domains protein 2, FHL2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=5.07 E-value=87 Score=18.89 Aligned_cols=14 Identities=36% Similarity=1.037 Sum_probs=9.0
Q ss_pred CCCCCc-cc-cccccc
Q 019003 18 IPPGAA-YT-EPWWRG 31 (347)
Q Consensus 18 ~~~~~~-~s-~PWW~~ 31 (347)
+.++.+ |. |||.+.
T Consensus 8 ItsGGvtY~~~PWH~e 23 (26)
T d2d8za1 8 ITTGGVTYREQPWHKE 23 (26)
T ss_dssp CCSSEEESSSSEEETT
T ss_pred eecCceeecCCcchhh
Confidence 555555 55 899873
No 8
>d2a84a1 c.26.1.4 (A:3-288) Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=4.92 E-value=69 Score=27.64 Aligned_cols=11 Identities=27% Similarity=0.591 Sum_probs=9.0
Q ss_pred ceeechhhhHH
Q 019003 176 PVYVNAKQYMG 186 (347)
Q Consensus 176 PvyVNaKQY~r 186 (347)
.||||+.||.-
T Consensus 63 SIFVNP~QF~~ 73 (286)
T d2a84a1 63 SIFVNPMQFGA 73 (286)
T ss_dssp EECCCCCCTTC
T ss_pred EEeecccccCc
Confidence 67999999754
No 9
>d1y7ua1 d.38.1.1 (A:8-171) Acyl-coa hydrolase BC2038 {Bacillus cereus [TaxId: 1396]}
Probab=4.86 E-value=3.1e+02 Score=20.80 Aligned_cols=25 Identities=16% Similarity=0.078 Sum_probs=14.9
Q ss_pred hhhhHHHHHHHHHHHHHHHhhhhhh
Q 019003 181 AKQYMGILRRRQARAKAELEKKLIK 205 (347)
Q Consensus 181 aKQY~rIlrRRq~Rak~e~~~kl~k 205 (347)
.+.|..-.+||++|...+.+.+-++
T Consensus 135 ~~~~~~a~~r~~~R~~r~~~~~~~~ 159 (164)
T d1y7ua1 135 KESHRIAVLRAEQRHIRKAESKKVA 159 (164)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456666677777766555554433
No 10
>d2v5za2 d.16.1.5 (A:290-401) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}
Probab=4.08 E-value=1e+02 Score=20.80 Aligned_cols=12 Identities=50% Similarity=1.234 Sum_probs=9.4
Q ss_pred ccccccccccCC
Q 019003 23 AYTEPWWRGVGY 34 (347)
Q Consensus 23 ~~s~PWW~~~g~ 34 (347)
.|.+|||+..|+
T Consensus 11 ~f~~~FW~~~~~ 22 (112)
T d2v5za2 11 YYKEPFWRKKDY 22 (112)
T ss_dssp ECSSCGGGGGTE
T ss_pred EcCCCCCCCCCc
Confidence 378999997764
Done!