Query 019006
Match_columns 347
No_of_seqs 343 out of 2264
Neff 10.8
Searched_HMMs 29240
Date Mon Mar 25 09:26:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019006.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019006hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vyh_C Platelet-activating fac 100.0 7.6E-51 2.6E-55 365.5 41.9 288 50-347 101-409 (410)
2 3ow8_A WD repeat-containing pr 100.0 2.2E-50 7.4E-55 350.8 42.4 288 51-347 26-319 (321)
3 1got_B GT-beta; complex (GTP-b 100.0 6.8E-50 2.3E-54 350.6 42.5 290 48-346 46-340 (340)
4 3iz6_a 40S ribosomal protein R 100.0 8.1E-50 2.8E-54 355.4 37.1 293 50-347 59-373 (380)
5 2pbi_B Guanine nucleotide-bind 100.0 2.1E-48 7.2E-53 342.9 42.7 291 48-346 55-354 (354)
6 3frx_A Guanine nucleotide-bind 100.0 1.8E-47 6.1E-52 332.3 41.5 287 50-347 10-315 (319)
7 2ynn_A Coatomer subunit beta'; 100.0 5E-47 1.7E-51 327.2 40.9 285 49-343 5-297 (304)
8 3fm0_A Protein CIAO1; WDR39,SG 100.0 3.8E-47 1.3E-51 333.8 40.7 295 49-347 7-333 (345)
9 4ery_A WD repeat-containing pr 100.0 4.5E-46 1.5E-50 322.3 44.2 293 48-347 14-310 (312)
10 2xzm_R RACK1; ribosome, transl 100.0 4E-46 1.4E-50 327.1 42.0 287 50-347 14-338 (343)
11 1erj_A Transcriptional repress 100.0 2.4E-46 8.1E-51 334.5 39.6 287 54-347 61-387 (393)
12 4gqb_B Methylosome protein 50; 100.0 1.2E-46 4E-51 329.9 35.8 281 55-347 28-329 (344)
13 4g56_B MGC81050 protein; prote 100.0 3.6E-46 1.2E-50 329.0 34.3 284 53-347 38-341 (357)
14 2hes_X YDR267CP; beta-propelle 100.0 4.7E-45 1.6E-49 318.5 39.2 292 49-347 6-326 (330)
15 4aow_A Guanine nucleotide-bind 100.0 5.4E-44 1.8E-48 312.3 43.2 287 50-347 31-335 (340)
16 1nr0_A Actin interacting prote 100.0 1.1E-44 3.6E-49 341.6 39.3 290 49-347 139-565 (611)
17 1nr0_A Actin interacting prote 100.0 2.2E-44 7.4E-49 339.5 40.6 290 49-347 51-353 (611)
18 2ymu_A WD-40 repeat protein; u 100.0 9.7E-44 3.3E-48 332.8 41.6 281 50-346 296-577 (577)
19 3zwl_B Eukaryotic translation 100.0 7.6E-43 2.6E-47 308.0 42.7 285 51-347 26-344 (369)
20 3dm0_A Maltose-binding peripla 100.0 3.3E-43 1.1E-47 336.2 41.3 286 51-347 376-691 (694)
21 1sq9_A Antiviral protein SKI8; 100.0 2.5E-43 8.7E-48 314.8 34.1 290 50-347 9-393 (397)
22 2ynn_A Coatomer subunit beta'; 100.0 1.6E-42 5.5E-47 299.0 35.8 247 93-347 6-257 (304)
23 2ymu_A WD-40 repeat protein; u 100.0 1E-41 3.5E-46 319.1 42.6 283 49-347 254-537 (577)
24 3k26_A Polycomb protein EED; W 100.0 3.9E-43 1.3E-47 309.7 30.6 290 51-347 12-364 (366)
25 3gre_A Serine/threonine-protei 100.0 7.8E-43 2.7E-47 315.9 32.0 292 49-346 54-437 (437)
26 3ei3_B DNA damage-binding prot 100.0 4.2E-42 1.4E-46 305.8 35.6 287 49-347 65-380 (383)
27 4e54_B DNA damage-binding prot 100.0 2.6E-42 8.8E-47 312.5 33.9 291 51-347 113-428 (435)
28 3i2n_A WD repeat-containing pr 100.0 3.1E-42 1.1E-46 303.0 33.4 292 51-347 12-351 (357)
29 1r5m_A SIR4-interacting protei 100.0 7.3E-42 2.5E-46 307.3 36.6 279 56-347 107-423 (425)
30 2pm9_A Protein WEB1, protein t 100.0 7.6E-43 2.6E-47 313.5 29.4 286 54-347 64-412 (416)
31 1gxr_A ESG1, transducin-like e 100.0 4.4E-41 1.5E-45 293.2 38.9 283 52-347 46-335 (337)
32 1k8k_C P40, ARP2/3 complex 41 100.0 1.1E-41 3.8E-46 301.3 35.5 286 52-347 3-359 (372)
33 1vyh_C Platelet-activating fac 100.0 1.7E-41 5.8E-46 304.7 35.7 246 93-347 101-367 (410)
34 3odt_A Protein DOA1; ubiquitin 100.0 5.8E-41 2E-45 289.6 37.7 280 48-347 9-294 (313)
35 4gqb_B Methylosome protein 50; 100.0 3.6E-41 1.2E-45 295.2 35.4 246 55-310 80-334 (344)
36 3dwl_C Actin-related protein 2 100.0 4.4E-43 1.5E-47 311.3 23.4 289 52-347 6-377 (377)
37 2pm9_A Protein WEB1, protein t 100.0 2.5E-42 8.6E-47 310.1 28.5 285 56-347 11-335 (416)
38 4h5i_A Guanine nucleotide-exch 100.0 1.9E-42 6.4E-47 306.1 26.9 283 58-347 15-341 (365)
39 3ow8_A WD repeat-containing pr 100.0 8.2E-41 2.8E-45 290.5 36.8 246 51-306 74-320 (321)
40 2pm7_B Protein transport prote 100.0 6.8E-41 2.3E-45 287.9 35.3 254 50-306 2-284 (297)
41 1r5m_A SIR4-interacting protei 100.0 1E-40 3.5E-45 299.8 35.8 281 55-347 43-359 (425)
42 4aez_A CDC20, WD repeat-contai 100.0 2.5E-40 8.6E-45 296.3 37.4 281 53-347 87-378 (401)
43 1yfq_A Cell cycle arrest prote 100.0 1.3E-40 4.3E-45 291.3 33.7 283 52-341 6-315 (342)
44 4a11_B DNA excision repair pro 100.0 3.8E-40 1.3E-44 294.8 37.5 294 49-347 35-363 (408)
45 4gga_A P55CDC, cell division c 100.0 7.3E-40 2.5E-44 295.1 38.0 275 59-347 107-393 (420)
46 3bg1_A Protein SEC13 homolog; 100.0 9.3E-41 3.2E-45 289.6 28.8 251 52-306 8-292 (316)
47 2j04_B YDR362CP, TAU91; beta p 100.0 1.4E-41 4.8E-46 312.4 24.1 287 52-347 202-515 (524)
48 3dw8_B Serine/threonine-protei 100.0 6.5E-40 2.2E-44 297.2 34.8 284 55-346 26-443 (447)
49 4ggc_A P55CDC, cell division c 100.0 4.8E-39 1.7E-43 278.2 38.2 274 60-347 28-313 (318)
50 2pm7_B Protein transport prote 100.0 9.1E-40 3.1E-44 280.9 32.9 250 94-347 3-283 (297)
51 3frx_A Guanine nucleotide-bind 100.0 1.1E-39 3.8E-44 283.1 33.7 252 49-308 57-318 (319)
52 4g56_B MGC81050 protein; prote 100.0 9.5E-40 3.3E-44 287.9 32.8 248 52-309 89-345 (357)
53 3sfz_A APAF-1, apoptotic pepti 100.0 4.9E-39 1.7E-43 325.8 42.3 293 50-347 608-1032(1249)
54 1got_B GT-beta; complex (GTP-b 100.0 6.3E-39 2.2E-43 280.9 36.8 246 92-347 47-299 (340)
55 3f3f_A Nucleoporin SEH1; struc 100.0 1.1E-39 3.9E-44 285.0 32.0 289 51-347 5-335 (351)
56 1gxr_A ESG1, transducin-like e 100.0 2.8E-39 9.6E-44 281.7 34.3 280 55-347 7-294 (337)
57 3mmy_A MRNA export factor; mRN 100.0 4.1E-39 1.4E-43 284.0 35.7 294 48-346 30-343 (368)
58 3vl1_A 26S proteasome regulato 100.0 3.5E-39 1.2E-43 290.2 34.2 284 54-347 95-417 (420)
59 3fm0_A Protein CIAO1; WDR39,SG 100.0 6E-39 2.1E-43 281.6 34.4 262 53-315 57-343 (345)
60 3v7d_B Cell division control p 100.0 1.3E-38 4.6E-43 290.3 37.8 280 50-347 114-419 (464)
61 1pgu_A Actin interacting prote 100.0 1.2E-38 4E-43 300.1 37.0 288 48-347 54-364 (615)
62 3vl1_A 26S proteasome regulato 100.0 4.2E-40 1.4E-44 296.2 25.9 278 59-347 58-363 (420)
63 3mkq_A Coatomer beta'-subunit; 100.0 1E-38 3.5E-43 310.3 37.3 288 49-346 5-299 (814)
64 1p22_A F-BOX/WD-repeat protein 100.0 2.7E-38 9.2E-43 286.1 37.0 271 53-347 129-412 (435)
65 2pbi_B Guanine nucleotide-bind 100.0 5.5E-38 1.9E-42 276.4 37.4 247 92-347 56-313 (354)
66 4ery_A WD repeat-containing pr 100.0 7.1E-38 2.4E-42 270.8 37.0 249 91-347 14-266 (312)
67 1pgu_A Actin interacting prote 100.0 2.5E-38 8.5E-43 297.9 36.4 297 46-347 149-570 (615)
68 3iz6_a 40S ribosomal protein R 100.0 4E-39 1.4E-43 286.5 28.2 256 50-309 101-377 (380)
69 2oaj_A Protein SNI1; WD40 repe 100.0 3.8E-38 1.3E-42 307.8 37.2 163 54-220 55-247 (902)
70 1erj_A Transcriptional repress 100.0 8.5E-38 2.9E-42 279.1 36.1 239 59-307 125-389 (393)
71 2ovr_B FBW7, F-BOX/WD repeat p 100.0 3.4E-37 1.1E-41 279.7 39.3 280 49-347 151-440 (445)
72 3bg1_A Protein SEC13 homolog; 100.0 4.6E-39 1.6E-43 278.9 25.2 248 95-347 8-291 (316)
73 2ovr_B FBW7, F-BOX/WD repeat p 100.0 5.1E-37 1.7E-41 278.5 38.3 275 49-347 110-389 (445)
74 3jrp_A Fusion protein of prote 100.0 7.7E-38 2.7E-42 277.0 32.1 255 50-307 4-287 (379)
75 3v7d_B Cell division control p 100.0 7.2E-37 2.5E-41 278.9 38.7 279 49-345 154-459 (464)
76 2xzm_R RACK1; ribosome, transl 100.0 2.6E-37 9E-42 270.9 34.3 253 49-308 68-341 (343)
77 2hes_X YDR267CP; beta-propelle 100.0 5.1E-37 1.8E-41 267.7 34.3 247 91-347 5-278 (330)
78 2aq5_A Coronin-1A; WD40 repeat 100.0 1.2E-37 4.1E-42 278.9 29.8 280 60-347 37-340 (402)
79 3sfz_A APAF-1, apoptotic pepti 100.0 3.6E-37 1.2E-41 312.1 35.6 293 49-347 649-1114(1249)
80 3jrp_A Fusion protein of prote 100.0 3.5E-37 1.2E-41 272.8 28.7 250 94-347 5-285 (379)
81 2oaj_A Protein SNI1; WD40 repe 100.0 1.3E-36 4.6E-41 296.9 34.4 200 52-257 12-242 (902)
82 2j04_B YDR362CP, TAU91; beta p 100.0 4.4E-38 1.5E-42 289.2 21.6 261 56-347 132-426 (524)
83 3vu4_A KMHSV2; beta-propeller 100.0 2.2E-35 7.7E-40 259.8 34.4 278 49-347 11-334 (355)
84 3mkq_A Coatomer beta'-subunit; 100.0 1.4E-35 5E-40 288.1 36.0 288 49-347 47-384 (814)
85 1k8k_C P40, ARP2/3 complex 41 100.0 1.2E-35 4E-40 262.6 31.8 246 96-347 4-272 (372)
86 3k26_A Polycomb protein EED; W 100.0 2.9E-36 9.9E-41 265.6 27.7 245 56-306 68-365 (366)
87 3ei3_B DNA damage-binding prot 100.0 1.6E-35 5.5E-40 263.3 31.9 249 91-347 64-337 (383)
88 3i2n_A WD repeat-containing pr 100.0 3.3E-36 1.1E-40 264.5 27.1 252 54-310 62-356 (357)
89 3dwl_C Actin-related protein 2 100.0 4.9E-37 1.7E-41 272.4 21.8 244 96-346 7-278 (377)
90 2xyi_A Probable histone-bindin 100.0 2.9E-35 1E-39 265.8 33.5 247 94-347 122-408 (430)
91 3gre_A Serine/threonine-protei 100.0 1.6E-36 5.4E-41 274.5 24.3 265 64-347 34-357 (437)
92 1sq9_A Antiviral protein SKI8; 100.0 1.2E-35 4.1E-40 265.0 29.1 254 49-308 54-396 (397)
93 3dw8_B Serine/threonine-protei 100.0 4.3E-36 1.5E-40 272.1 26.4 248 98-347 26-371 (447)
94 3dm0_A Maltose-binding peripla 100.0 6.8E-35 2.3E-39 278.8 35.8 250 50-306 423-692 (694)
95 3zwl_B Eukaryotic translation 100.0 3.9E-34 1.3E-38 252.2 35.1 249 90-347 22-302 (369)
96 2vdu_B TRNA (guanine-N(7)-)-me 100.0 2.4E-34 8.1E-39 261.4 34.5 281 58-346 5-388 (450)
97 3jro_A Fusion protein of prote 100.0 1.7E-35 5.9E-40 284.9 27.9 254 51-307 3-285 (753)
98 2j04_A TAU60, YPL007P, hypothe 100.0 2.3E-35 8E-40 266.0 25.3 263 56-347 14-295 (588)
99 2xyi_A Probable histone-bindin 100.0 1.3E-34 4.4E-39 261.6 30.3 254 51-308 122-411 (430)
100 3odt_A Protein DOA1; ubiquitin 100.0 4.5E-34 1.5E-38 246.3 31.6 247 50-313 52-302 (313)
101 3jro_A Fusion protein of prote 100.0 3.7E-35 1.3E-39 282.6 26.8 250 94-347 3-283 (753)
102 3lrv_A PRE-mRNA-splicing facto 100.0 1E-34 3.5E-39 254.5 27.0 267 64-345 43-329 (343)
103 4gga_A P55CDC, cell division c 100.0 2.4E-33 8.1E-38 252.5 36.6 261 53-326 143-414 (420)
104 4aow_A Guanine nucleotide-bind 100.0 3.1E-33 1.1E-37 244.0 36.0 254 49-309 78-339 (340)
105 3bws_A Protein LP49; two-domai 100.0 1.3E-33 4.3E-38 255.0 34.2 282 53-347 119-430 (433)
106 4aez_A CDC20, WD repeat-contai 100.0 1.7E-33 5.9E-38 251.9 34.2 249 55-314 132-387 (401)
107 4e54_B DNA damage-binding prot 100.0 1.9E-34 6.6E-39 260.8 27.7 248 94-347 113-385 (435)
108 1yfq_A Cell cycle arrest prote 100.0 3.5E-34 1.2E-38 250.3 26.2 241 96-347 7-280 (342)
109 1l0q_A Surface layer protein; 100.0 2.3E-32 7.7E-37 243.5 37.8 264 70-347 3-273 (391)
110 4gq1_A NUP37; propeller, trans 100.0 6.2E-35 2.1E-39 260.6 19.6 255 56-342 88-383 (393)
111 2j04_A TAU60, YPL007P, hypothe 100.0 1.9E-34 6.3E-39 260.2 18.9 245 55-338 83-350 (588)
112 4a11_B DNA excision repair pro 100.0 3.2E-32 1.1E-36 243.3 33.1 281 54-347 96-403 (408)
113 4h5i_A Guanine nucleotide-exch 100.0 4.2E-33 1.4E-37 246.2 27.0 243 52-307 68-343 (365)
114 2aq5_A Coronin-1A; WD40 repeat 100.0 3.1E-33 1E-37 250.3 26.3 254 49-310 73-345 (402)
115 1l0q_A Surface layer protein; 100.0 1.3E-30 4.3E-35 232.2 38.6 284 50-347 25-340 (391)
116 3vu4_A KMHSV2; beta-propeller 100.0 2.5E-32 8.6E-37 240.4 26.6 240 93-347 12-269 (355)
117 4ggc_A P55CDC, cell division c 100.0 1.8E-30 6.1E-35 224.4 36.5 245 52-309 62-317 (318)
118 1p22_A F-BOX/WD-repeat protein 100.0 2.8E-31 9.6E-36 240.1 32.4 230 97-347 130-363 (435)
119 3mmy_A MRNA export factor; mRN 100.0 1.1E-31 3.9E-36 236.2 27.8 247 91-347 30-302 (368)
120 2vdu_B TRNA (guanine-N(7)-)-me 100.0 1.2E-31 4E-36 243.6 27.7 237 101-347 5-337 (450)
121 3lrv_A PRE-mRNA-splicing facto 100.0 3.5E-32 1.2E-36 238.4 22.8 226 108-347 44-290 (343)
122 2w18_A PALB2, fancn, partner a 100.0 1.7E-30 5.7E-35 220.9 30.7 274 59-347 41-355 (356)
123 3f3f_A Nucleoporin SEH1; struc 100.0 4.2E-30 1.4E-34 224.2 28.3 257 49-313 49-343 (351)
124 2w18_A PALB2, fancn, partner a 100.0 1.4E-29 4.7E-34 215.3 21.7 198 56-255 110-355 (356)
125 3bws_A Protein LP49; two-domai 100.0 6.3E-28 2.1E-32 217.7 34.1 279 56-347 59-388 (433)
126 1nir_A Nitrite reductase; hemo 100.0 1.8E-27 6.2E-32 220.1 35.7 282 60-347 181-512 (543)
127 2hqs_A Protein TOLB; TOLB, PAL 100.0 3.1E-28 1.1E-32 218.6 27.0 265 53-332 113-411 (415)
128 2hqs_A Protein TOLB; TOLB, PAL 100.0 9E-28 3.1E-32 215.6 25.7 278 56-347 61-385 (415)
129 1ri6_A Putative isomerase YBHE 100.0 1.3E-26 4.5E-31 202.1 31.5 274 71-346 7-305 (343)
130 1nir_A Nitrite reductase; hemo 100.0 9.9E-27 3.4E-31 215.2 30.7 274 64-347 144-456 (543)
131 4gq1_A NUP37; propeller, trans 100.0 5.2E-28 1.8E-32 215.7 18.4 203 52-256 131-388 (393)
132 2ecf_A Dipeptidyl peptidase IV 100.0 2.1E-26 7.3E-31 221.6 28.1 281 57-347 36-411 (741)
133 3u4y_A Uncharacterized protein 99.9 1.5E-24 5.1E-29 188.5 32.7 274 65-347 5-302 (331)
134 2ojh_A Uncharacterized protein 99.9 4.7E-25 1.6E-29 187.8 27.9 255 74-340 17-293 (297)
135 3vgz_A Uncharacterized protein 99.9 3E-24 1E-28 188.1 33.4 271 56-339 39-334 (353)
136 1ri6_A Putative isomerase YBHE 99.9 1.2E-23 4E-28 183.3 31.5 270 55-332 35-336 (343)
137 1xfd_A DIP, dipeptidyl aminope 99.9 5.1E-25 1.8E-29 211.4 23.6 280 59-347 18-391 (723)
138 1k32_A Tricorn protease; prote 99.9 2.6E-24 9E-29 214.3 29.0 279 51-346 197-499 (1045)
139 1pby_B Quinohemoprotein amine 99.9 1.6E-23 5.6E-28 182.0 29.3 263 70-347 2-308 (337)
140 3o4h_A Acylamino-acid-releasin 99.9 1E-24 3.5E-29 204.3 21.8 272 56-346 20-312 (582)
141 1k32_A Tricorn protease; prote 99.9 2E-23 6.7E-28 208.0 32.2 291 50-347 45-459 (1045)
142 2z3z_A Dipeptidyl aminopeptida 99.9 1.7E-23 5.9E-28 200.3 30.2 275 58-347 82-433 (706)
143 3hfq_A Uncharacterized protein 99.9 8.3E-23 2.8E-27 178.8 32.0 269 77-346 14-314 (347)
144 2ecf_A Dipeptidyl peptidase IV 99.9 1.8E-23 6.1E-28 201.3 27.8 275 59-346 110-456 (741)
145 3u4y_A Uncharacterized protein 99.9 5.2E-22 1.8E-26 172.4 34.2 273 52-330 35-326 (331)
146 3vgz_A Uncharacterized protein 99.9 3.6E-22 1.2E-26 174.8 30.5 241 100-347 40-301 (353)
147 2ojh_A Uncharacterized protein 99.9 3.1E-23 1E-27 176.5 21.9 239 51-298 35-293 (297)
148 3scy_A Hypothetical bacterial 99.9 1.3E-21 4.6E-26 172.1 33.1 264 76-346 24-334 (361)
149 1jmx_B Amine dehydrogenase; ox 99.9 6.9E-22 2.4E-26 172.6 29.7 261 62-347 4-323 (349)
150 2z3z_A Dipeptidyl aminopeptida 99.9 1.2E-22 4.1E-27 194.5 26.9 275 60-346 28-388 (706)
151 3scy_A Hypothetical bacterial 99.9 3E-21 1E-25 169.9 32.0 265 56-327 48-360 (361)
152 1jof_A Carboxy-CIS,CIS-muconat 99.9 4.7E-21 1.6E-25 169.0 30.4 273 72-347 5-339 (365)
153 3pe7_A Oligogalacturonate lyas 99.9 3.8E-22 1.3E-26 177.1 23.1 290 50-346 23-379 (388)
154 1xfd_A DIP, dipeptidyl aminope 99.9 5.5E-22 1.9E-26 190.3 25.9 281 50-337 50-428 (723)
155 1pby_B Quinohemoprotein amine 99.9 1.2E-21 4E-26 170.2 25.1 244 59-318 35-321 (337)
156 3hfq_A Uncharacterized protein 99.9 5.3E-21 1.8E-25 167.3 29.4 250 55-311 37-323 (347)
157 3o4h_A Acylamino-acid-releasin 99.9 3.5E-22 1.2E-26 187.1 22.6 232 100-347 21-274 (582)
158 2oit_A Nucleoporin 214KDA; NH2 99.9 7.7E-22 2.6E-26 177.7 22.8 200 57-258 36-279 (434)
159 1z68_A Fibroblast activation p 99.9 6.4E-22 2.2E-26 189.8 19.8 268 62-346 20-388 (719)
160 2oit_A Nucleoporin 214KDA; NH2 99.9 1.8E-21 6.2E-26 175.3 19.5 210 101-347 37-276 (434)
161 3c5m_A Oligogalacturonate lyas 99.9 3.7E-20 1.3E-24 164.5 19.2 272 59-345 37-378 (396)
162 2oiz_A Aromatic amine dehydrog 99.8 3.9E-18 1.3E-22 149.9 28.0 264 52-331 46-360 (361)
163 3azo_A Aminopeptidase; POP fam 99.8 3.9E-19 1.3E-23 168.8 23.1 284 52-345 18-363 (662)
164 4a5s_A Dipeptidyl peptidase 4 99.8 4.9E-19 1.7E-23 170.3 23.6 273 58-338 17-383 (740)
165 1q7f_A NHL, brain tumor CG1071 99.8 2.1E-17 7.1E-22 140.4 31.0 238 98-347 27-278 (286)
166 1jof_A Carboxy-CIS,CIS-muconat 99.8 2.2E-18 7.5E-23 151.9 23.9 244 56-308 38-342 (365)
167 1q7f_A NHL, brain tumor CG1071 99.8 9E-17 3.1E-21 136.5 31.6 240 55-308 27-281 (286)
168 1jmx_B Amine dehydrogenase; ox 99.8 1E-17 3.6E-22 146.0 26.3 242 59-317 44-335 (349)
169 2oiz_A Aromatic amine dehydrog 99.8 1.2E-17 4.3E-22 146.7 26.8 261 77-347 29-332 (361)
170 1z68_A Fibroblast activation p 99.8 3E-19 1E-23 171.3 17.6 239 104-346 19-343 (719)
171 2dg1_A DRP35, lactonase; beta 99.8 3.3E-17 1.1E-21 142.3 28.9 273 58-339 6-300 (333)
172 3fvz_A Peptidyl-glycine alpha- 99.8 6E-17 2.1E-21 140.6 30.0 239 101-347 24-320 (329)
173 3fvz_A Peptidyl-glycine alpha- 99.8 5.5E-17 1.9E-21 140.8 28.1 243 57-307 23-322 (329)
174 4a5s_A Dipeptidyl peptidase 4 99.8 2.2E-18 7.4E-23 165.8 20.0 239 102-346 18-350 (740)
175 3azo_A Aminopeptidase; POP fam 99.8 2.4E-17 8.1E-22 156.6 24.6 245 96-346 19-320 (662)
176 2z2n_A Virginiamycin B lyase; 99.8 2E-14 7E-19 122.3 39.1 275 53-343 10-290 (299)
177 2gop_A Trilobed protease; beta 99.8 2.1E-16 7.2E-21 137.9 24.8 256 58-345 15-327 (347)
178 3pe7_A Oligogalacturonate lyas 99.8 1.8E-16 6.2E-21 140.4 22.4 248 91-347 21-327 (388)
179 3e5z_A Putative gluconolactona 99.7 8.9E-15 3E-19 124.8 31.3 242 51-310 21-289 (296)
180 3e5z_A Putative gluconolactona 99.7 5.2E-15 1.8E-19 126.3 29.1 235 94-344 21-282 (296)
181 1rwi_B Serine/threonine-protei 99.7 1.5E-14 5.1E-19 121.5 28.9 236 102-347 25-262 (270)
182 2bkl_A Prolyl endopeptidase; m 99.7 5.2E-16 1.8E-20 148.2 21.6 244 55-310 118-400 (695)
183 2xdw_A Prolyl endopeptidase; a 99.7 1.1E-14 3.8E-19 139.3 30.8 242 99-347 123-412 (710)
184 2qc5_A Streptogramin B lactona 99.7 8E-13 2.7E-17 112.4 38.8 275 55-346 17-297 (300)
185 2xdw_A Prolyl endopeptidase; a 99.7 4.1E-15 1.4E-19 142.3 27.1 244 55-309 122-416 (710)
186 3dsm_A Uncharacterized protein 99.7 9.1E-15 3.1E-19 126.7 25.8 255 77-347 15-300 (328)
187 1qks_A Cytochrome CD1 nitrite 99.7 1.1E-13 3.9E-18 127.8 34.6 282 58-346 197-535 (567)
188 1rwi_B Serine/threonine-protei 99.7 3.8E-14 1.3E-18 119.0 28.2 240 59-310 25-267 (270)
189 2dg1_A DRP35, lactonase; beta 99.7 1.9E-13 6.3E-18 118.5 33.0 240 50-297 37-300 (333)
190 1qks_A Cytochrome CD1 nitrite 99.7 1.9E-13 6.6E-18 126.3 34.7 272 67-347 165-475 (567)
191 2gop_A Trilobed protease; beta 99.7 1.1E-14 3.9E-19 126.9 24.4 236 58-321 59-343 (347)
192 3dsm_A Uncharacterized protein 99.7 6.1E-14 2.1E-18 121.5 28.8 253 59-326 45-319 (328)
193 2bkl_A Prolyl endopeptidase; m 99.7 1.3E-14 4.3E-19 138.6 25.9 272 67-347 77-395 (695)
194 3no2_A Uncharacterized protein 99.7 5.7E-14 1.9E-18 118.5 25.9 211 111-336 4-230 (276)
195 3c5m_A Oligogalacturonate lyas 99.7 4.1E-15 1.4E-19 131.9 19.4 232 103-347 38-327 (396)
196 3no2_A Uncharacterized protein 99.6 4.3E-13 1.5E-17 113.1 27.6 245 68-324 4-271 (276)
197 1yr2_A Prolyl oligopeptidase; 99.6 1.8E-13 6E-18 131.6 28.2 270 67-347 116-439 (741)
198 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 1.1E-12 3.6E-17 112.6 28.5 240 100-347 17-297 (314)
199 2mad_H Methylamine dehydrogena 99.6 1.3E-11 4.5E-16 108.5 35.9 271 66-347 29-348 (373)
200 1yr2_A Prolyl oligopeptidase; 99.6 2.1E-13 7.1E-18 131.1 24.5 244 55-309 160-443 (741)
201 2z2n_A Virginiamycin B lyase; 99.6 1.9E-11 6.6E-16 103.7 33.9 236 98-346 12-252 (299)
202 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 4.4E-12 1.5E-16 108.7 29.9 240 54-307 14-299 (314)
203 2mad_H Methylamine dehydrogena 99.6 2.9E-11 9.9E-16 106.3 33.2 237 62-314 70-357 (373)
204 1xip_A Nucleoporin NUP159; bet 99.6 6.7E-14 2.3E-18 122.5 15.8 172 59-244 39-231 (388)
205 3sjl_D Methylamine dehydrogena 99.6 3.6E-12 1.2E-16 111.2 25.4 252 62-329 82-384 (386)
206 3sjl_D Methylamine dehydrogena 99.5 7.7E-12 2.6E-16 109.0 27.0 275 64-347 39-361 (386)
207 3hrp_A Uncharacterized protein 99.5 1.7E-11 5.8E-16 109.3 29.4 235 102-346 132-407 (409)
208 3hrp_A Uncharacterized protein 99.5 3.3E-11 1.1E-15 107.4 29.6 237 58-305 131-408 (409)
209 3g4e_A Regucalcin; six bladed 99.5 9.8E-11 3.4E-15 99.8 31.0 229 102-338 14-262 (297)
210 2qe8_A Uncharacterized protein 99.5 1.4E-12 4.8E-17 113.7 19.4 264 58-342 17-314 (343)
211 2qc5_A Streptogramin B lactona 99.5 4.3E-10 1.5E-14 95.4 33.8 235 99-346 18-257 (300)
212 3c75_H MADH, methylamine dehyd 99.5 2.2E-11 7.6E-16 108.0 25.9 272 67-347 82-400 (426)
213 3c75_H MADH, methylamine dehyd 99.5 2.7E-11 9.1E-16 107.5 24.9 239 62-314 122-409 (426)
214 3dr2_A Exported gluconolactona 99.5 6E-11 2.1E-15 101.5 26.2 229 101-344 45-302 (305)
215 3iuj_A Prolyl endopeptidase; h 99.4 2.4E-11 8.4E-16 115.8 23.9 243 54-310 125-408 (693)
216 1xip_A Nucleoporin NUP159; bet 99.4 7.2E-12 2.5E-16 109.6 17.2 169 145-335 40-230 (388)
217 3dr2_A Exported gluconolactona 99.4 4.1E-10 1.4E-14 96.3 27.6 234 51-304 38-303 (305)
218 3g4e_A Regucalcin; six bladed 99.4 2E-09 6.8E-14 91.6 29.6 230 53-296 8-261 (297)
219 2ghs_A AGR_C_1268P; regucalcin 99.4 2.5E-09 8.6E-14 92.3 29.3 223 104-339 52-293 (326)
220 2ghs_A AGR_C_1268P; regucalcin 99.4 2.6E-09 8.8E-14 92.2 29.3 227 53-296 44-291 (326)
221 3iuj_A Prolyl endopeptidase; h 99.4 2.3E-10 7.9E-15 109.1 24.3 237 98-347 126-403 (693)
222 2hz6_A Endoplasmic reticulum t 99.3 3.3E-12 1.1E-16 112.4 8.7 202 111-330 8-215 (369)
223 1kb0_A Quinohemoprotein alcoho 99.3 4.1E-10 1.4E-14 106.7 22.8 269 69-347 77-505 (677)
224 1mda_H Methylamine dehydrogena 99.3 4.1E-10 1.4E-14 98.2 20.4 245 62-329 69-367 (368)
225 3q7m_A Lipoprotein YFGL, BAMB; 99.3 1.8E-08 6.1E-13 88.6 29.9 258 68-346 102-375 (376)
226 2qe8_A Uncharacterized protein 99.3 2.7E-10 9.2E-15 99.2 17.6 222 101-346 17-275 (343)
227 1yiq_A Quinohemoprotein alcoho 99.3 2.8E-09 9.5E-14 101.2 25.5 274 69-347 70-503 (689)
228 1npe_A Nidogen, entactin; glyc 99.3 8.2E-08 2.8E-12 80.1 31.8 249 71-331 3-263 (267)
229 3q7m_A Lipoprotein YFGL, BAMB; 99.2 2.2E-08 7.7E-13 88.0 29.1 258 68-346 52-334 (376)
230 1yiq_A Quinohemoprotein alcoho 99.2 2.7E-09 9.2E-14 101.3 24.2 254 69-334 121-533 (689)
231 1mda_H Methylamine dehydrogena 99.2 1.2E-09 4.2E-14 95.2 19.7 251 80-347 47-344 (368)
232 2hz6_A Endoplasmic reticulum t 99.2 5.5E-12 1.9E-16 110.9 4.8 183 68-258 8-193 (369)
233 1kb0_A Quinohemoprotein alcoho 99.2 5.3E-09 1.8E-13 99.1 24.5 254 69-335 128-536 (677)
234 2ece_A 462AA long hypothetical 99.2 3.1E-08 1.1E-12 87.2 27.0 224 110-337 93-399 (462)
235 3hxj_A Pyrrolo-quinoline quino 99.1 3.1E-08 1.1E-12 85.2 23.9 261 57-345 59-320 (330)
236 2ece_A 462AA long hypothetical 99.1 1.7E-07 5.7E-12 82.6 25.7 226 67-295 93-399 (462)
237 2iwa_A Glutamine cyclotransfer 99.1 4.6E-08 1.6E-12 80.8 20.9 197 103-308 23-238 (266)
238 3hxj_A Pyrrolo-quinoline quino 99.1 8.7E-09 3E-13 88.6 17.3 255 64-346 26-281 (330)
239 1fwx_A Nitrous oxide reductase 99.0 6.6E-08 2.3E-12 88.0 20.8 240 67-309 99-433 (595)
240 2iwa_A Glutamine cyclotransfer 99.0 1.4E-07 4.8E-12 78.0 20.7 193 144-346 22-234 (266)
241 3nol_A Glutamine cyclotransfer 99.0 1.3E-07 4.6E-12 77.2 19.4 185 144-338 44-244 (262)
242 1kv9_A Type II quinohemoprotei 98.9 3.4E-07 1.2E-11 86.7 24.9 273 69-346 66-485 (668)
243 2fp8_A Strictosidine synthase; 98.9 2E-06 6.9E-11 73.8 27.1 245 53-307 14-313 (322)
244 3nok_A Glutaminyl cyclase; bet 98.9 3.1E-07 1.1E-11 75.1 19.5 182 103-295 57-253 (268)
245 4a2l_A BT_4663, two-component 98.9 2.7E-05 9.4E-10 75.3 36.8 266 57-337 214-516 (795)
246 3nol_A Glutamine cyclotransfer 98.9 3.5E-07 1.2E-11 74.8 19.2 184 103-296 45-244 (262)
247 3nok_A Glutaminyl cyclase; bet 98.9 2.1E-07 7.2E-12 76.1 17.3 183 144-337 56-253 (268)
248 4a2l_A BT_4663, two-component 98.9 2E-05 7E-10 76.2 34.4 266 60-337 175-470 (795)
249 1fwx_A Nitrous oxide reductase 98.9 9.3E-08 3.2E-12 87.1 16.7 221 111-337 100-406 (595)
250 1kv9_A Type II quinohemoprotei 98.9 6.7E-07 2.3E-11 84.6 23.1 258 69-337 117-520 (668)
251 1k3i_A Galactose oxidase precu 98.9 4.8E-07 1.7E-11 85.6 22.1 269 62-338 190-530 (656)
252 2ad6_A Methanol dehydrogenase 98.8 3.3E-06 1.1E-10 78.4 26.6 269 69-346 62-491 (571)
253 3mbr_X Glutamine cyclotransfer 98.8 1.6E-06 5.5E-11 70.2 21.3 186 143-338 21-223 (243)
254 2fp8_A Strictosidine synthase; 98.8 9.1E-06 3.1E-10 69.6 27.6 234 102-347 20-311 (322)
255 1npe_A Nidogen, entactin; glyc 98.8 1.9E-05 6.4E-10 65.7 28.5 215 122-346 10-235 (267)
256 2p4o_A Hypothetical protein; p 98.8 4E-05 1.4E-09 65.1 30.7 227 58-298 32-279 (306)
257 1w6s_A Methanol dehydrogenase 98.8 9.5E-06 3.2E-10 75.4 27.7 269 69-346 62-500 (599)
258 2ad6_A Methanol dehydrogenase 98.8 4.5E-06 1.6E-10 77.4 25.4 252 69-334 115-522 (571)
259 3mbr_X Glutamine cyclotransfer 98.7 1.1E-05 3.8E-10 65.3 22.5 185 102-296 22-223 (243)
260 1w6s_A Methanol dehydrogenase 98.7 2.7E-05 9.3E-10 72.3 27.9 248 72-332 124-529 (599)
261 2p4o_A Hypothetical protein; p 98.7 8.4E-05 2.9E-09 63.1 28.6 221 102-334 33-273 (306)
262 3v65_B Low-density lipoprotein 98.6 0.00018 6.3E-09 63.2 31.0 238 78-326 95-337 (386)
263 3v64_C Agrin; beta propeller, 98.6 0.00019 6.5E-09 62.2 31.2 253 61-326 37-294 (349)
264 1flg_A Protein (quinoprotein e 98.6 3.7E-05 1.3E-09 71.4 25.4 160 165-333 291-543 (582)
265 3v9f_A Two-component system se 98.6 0.00045 1.5E-08 66.7 33.7 263 57-336 312-600 (781)
266 1flg_A Protein (quinoprotein e 98.6 9.5E-05 3.2E-09 68.7 27.7 230 112-346 117-513 (582)
267 3v9f_A Two-component system se 98.5 0.00093 3.2E-08 64.5 35.0 268 58-340 211-516 (781)
268 3tc9_A Hypothetical hydrolase; 98.5 7.8E-05 2.7E-09 66.6 24.5 240 103-346 139-427 (430)
269 4hw6_A Hypothetical protein, I 98.4 0.00031 1E-08 62.8 26.9 240 103-346 141-430 (433)
270 3sov_A LRP-6, low-density lipo 98.4 0.00058 2E-08 58.3 29.3 229 78-315 12-246 (318)
271 3p5b_L Low density lipoprotein 98.4 0.001 3.5E-08 58.7 32.8 229 79-316 92-329 (400)
272 3tc9_A Hypothetical hydrolase; 98.3 0.00067 2.3E-08 60.5 26.2 152 59-214 138-300 (430)
273 1ijq_A LDL receptor, low-densi 98.3 0.0011 3.9E-08 56.4 33.0 228 79-315 10-246 (316)
274 3qqz_A Putative uncharacterize 98.3 0.00043 1.5E-08 56.7 22.5 199 144-346 28-250 (255)
275 4hw6_A Hypothetical protein, I 98.3 0.0016 5.3E-08 58.2 27.9 239 58-305 139-431 (433)
276 2xbg_A YCF48-like protein; pho 98.3 0.0013 4.6E-08 56.2 32.6 268 57-345 35-318 (327)
277 3qqz_A Putative uncharacterize 98.3 0.001 3.5E-08 54.5 25.9 204 95-306 21-252 (255)
278 1n7d_A LDL receptor, low-densi 98.2 7.4E-05 2.5E-09 71.0 17.5 239 79-326 386-633 (699)
279 3v64_C Agrin; beta propeller, 98.2 0.0025 8.6E-08 55.1 27.8 214 122-345 53-271 (349)
280 3v65_B Low-density lipoprotein 98.2 0.0029 9.9E-08 55.5 26.2 215 121-345 95-314 (386)
281 2xe4_A Oligopeptidase B; hydro 98.2 0.00037 1.3E-08 66.9 21.8 194 102-305 175-398 (751)
282 1k3i_A Galactose oxidase precu 98.1 0.00018 6.2E-09 68.0 19.4 229 105-339 190-476 (656)
283 3amr_A 3-phytase; beta-propell 98.1 0.0013 4.5E-08 56.1 22.0 197 112-314 40-271 (355)
284 3kya_A Putative phosphatase; s 98.1 0.0025 8.6E-08 57.3 24.5 240 103-346 141-472 (496)
285 3m0c_C LDL receptor, low-densi 98.1 0.0083 2.8E-07 57.6 31.9 228 78-315 403-640 (791)
286 1ijq_A LDL receptor, low-densi 98.1 0.0041 1.4E-07 52.9 29.9 214 122-345 10-234 (316)
287 3amr_A 3-phytase; beta-propell 98.1 0.0023 8E-08 54.6 22.2 183 156-346 41-260 (355)
288 2xe4_A Oligopeptidase B; hydro 98.0 0.00041 1.4E-08 66.6 19.4 195 145-345 176-394 (751)
289 2xzh_A Clathrin heavy chain 1; 98.0 0.005 1.7E-07 51.7 29.6 254 78-343 48-326 (365)
290 3s94_A LRP-6, low-density lipo 98.0 0.0075 2.6E-07 56.3 26.4 229 78-315 17-251 (619)
291 3kya_A Putative phosphatase; s 98.0 0.0088 3E-07 53.8 27.0 245 59-311 140-479 (496)
292 3sov_A LRP-6, low-density lipo 97.9 0.0075 2.6E-07 51.3 25.3 216 121-345 12-234 (318)
293 4a0p_A LRP6, LRP-6, low-densit 97.9 0.018 6.3E-07 53.8 31.4 229 77-316 13-246 (628)
294 3p5b_L Low density lipoprotein 97.8 0.015 5E-07 51.3 28.8 215 121-345 91-316 (400)
295 2p9w_A MAL S 1 allergenic prot 97.8 0.0035 1.2E-07 53.0 18.9 158 188-347 16-213 (334)
296 3m0c_C LDL receptor, low-densi 97.8 0.022 7.7E-07 54.6 26.6 199 57-256 423-631 (791)
297 3sre_A PON1, serum paraoxonase 97.7 0.0093 3.2E-07 51.4 20.6 234 102-345 51-344 (355)
298 2ism_A Putative oxidoreductase 97.6 0.028 9.6E-07 48.5 25.5 228 57-295 30-333 (352)
299 3s94_A LRP-6, low-density lipo 97.6 0.048 1.6E-06 50.9 32.3 280 58-346 84-420 (619)
300 1bpo_A Protein (clathrin); cla 97.6 0.032 1.1E-06 48.9 33.2 254 78-343 47-325 (494)
301 1n7d_A LDL receptor, low-densi 97.5 0.0041 1.4E-07 59.1 17.0 216 121-346 385-611 (699)
302 2p9w_A MAL S 1 allergenic prot 97.5 0.035 1.2E-06 47.0 26.8 201 102-307 14-265 (334)
303 2be1_A Serine/threonine-protei 97.5 0.0032 1.1E-07 53.8 14.4 195 113-312 11-236 (339)
304 2xbg_A YCF48-like protein; pho 97.5 0.038 1.3E-06 47.1 28.4 227 100-344 35-274 (327)
305 3pbp_A Nucleoporin NUP82; beta 97.2 0.066 2.3E-06 46.8 19.5 137 206-343 41-206 (452)
306 1xi4_A Clathrin heavy chain; a 97.2 0.041 1.4E-06 55.4 19.9 253 78-342 47-324 (1630)
307 2ism_A Putative oxidoreductase 97.2 0.097 3.3E-06 45.1 26.5 229 102-340 32-337 (352)
308 3sre_A PON1, serum paraoxonase 97.1 0.022 7.6E-07 49.0 15.6 138 204-347 81-250 (355)
309 3pbp_A Nucleoporin NUP82; beta 97.1 0.035 1.2E-06 48.5 16.5 135 165-303 41-208 (452)
310 1tl2_A L10, protein (tachylect 97.1 0.044 1.5E-06 43.3 15.6 145 186-343 42-204 (236)
311 3ei3_A DNA damage-binding prot 97.1 0.3 1E-05 49.0 27.8 212 123-344 808-1057(1158)
312 3ei3_A DNA damage-binding prot 97.0 0.32 1.1E-05 48.8 31.9 183 57-244 553-754 (1158)
313 3a9g_A Putative uncharacterize 97.0 0.15 5E-06 44.0 27.8 228 57-295 28-330 (354)
314 4a0p_A LRP6, LRP-6, low-densit 97.0 0.23 8E-06 46.4 29.6 216 120-346 13-234 (628)
315 2g8s_A Glucose/sorbosone dehyd 96.9 0.17 5.9E-06 43.5 22.2 235 102-343 19-348 (353)
316 2xzh_A Clathrin heavy chain 1; 96.8 0.18 6.1E-06 42.5 20.4 177 79-256 126-331 (365)
317 1bpo_A Protein (clathrin); cla 96.7 0.29 9.8E-06 43.0 22.4 177 79-256 125-330 (494)
318 3das_A Putative oxidoreductase 96.6 0.25 8.7E-06 42.2 18.3 146 185-335 32-218 (347)
319 3a9g_A Putative uncharacterize 96.6 0.29 9.9E-06 42.1 26.0 232 102-340 30-334 (354)
320 2vpj_A Kelch-like protein 12; 96.6 0.25 8.7E-06 41.1 21.7 172 155-340 63-264 (301)
321 1cru_A Protein (soluble quinop 96.4 0.38 1.3E-05 43.0 18.5 110 186-295 28-162 (454)
322 2xn4_A Kelch-like protein 2; s 96.3 0.4 1.4E-05 39.9 19.5 173 155-340 62-262 (302)
323 4asc_A Kelch repeat and BTB do 96.1 0.5 1.7E-05 39.6 19.7 177 72-257 8-221 (315)
324 2vpj_A Kelch-like protein 12; 96.0 0.55 1.9E-05 39.0 21.1 184 111-309 62-280 (301)
325 3ii7_A Kelch-like protein 7; p 95.7 0.76 2.6E-05 38.2 18.5 185 111-309 55-274 (306)
326 2uvk_A YJHT; unknown function, 95.7 0.68 2.3E-05 39.6 16.3 28 286-313 315-348 (357)
327 3das_A Putative oxidoreductase 95.5 1 3.5E-05 38.5 27.8 79 53-131 27-116 (347)
328 3s25_A Hypothetical 7-bladed b 95.1 1.2 4.2E-05 37.2 18.8 209 68-308 24-256 (302)
329 2g8s_A Glucose/sorbosone dehyd 95.1 1.4 4.9E-05 37.7 23.8 62 57-118 17-86 (353)
330 3ii7_A Kelch-like protein 7; p 95.1 1.2 4.2E-05 36.9 19.6 210 114-339 14-257 (306)
331 1zi0_A DNA gyrase subunit A; b 94.8 1.6 5.3E-05 36.7 23.3 190 111-306 2-225 (307)
332 2xn4_A Kelch-like protein 2; s 94.8 1.5 5E-05 36.4 20.2 184 111-309 61-278 (302)
333 2uvk_A YJHT; unknown function, 94.8 1.1 3.8E-05 38.2 15.0 40 299-340 286-327 (357)
334 3l6v_A GYRA, DNA gyrase subuni 94.6 2 6.7E-05 37.1 21.9 193 109-307 4-265 (370)
335 4asc_A Kelch repeat and BTB do 94.6 1.7 5.9E-05 36.3 21.4 209 115-339 8-253 (315)
336 1zgk_A Kelch-like ECH-associat 94.3 1.9 6.6E-05 35.8 18.3 172 155-340 71-273 (308)
337 1tl2_A L10, protein (tachylect 94.1 1.7 5.8E-05 34.4 16.8 146 144-302 42-205 (236)
338 1wp5_A Topoisomerase IV; broke 94.1 2.3 7.9E-05 35.9 21.5 192 110-307 3-225 (323)
339 3uc1_A DNA gyrase subunit A; D 94.0 2.4 8.3E-05 35.8 21.8 182 155-340 109-321 (327)
340 1xi4_A Clathrin heavy chain; a 93.5 1.3 4.4E-05 45.1 13.7 175 79-254 125-328 (1630)
341 1zgk_A Kelch-like ECH-associat 93.3 3.1 0.00011 34.5 19.2 184 111-309 70-289 (308)
342 1suu_A DNA gyrase subunit A; t 93.2 3.3 0.00011 34.7 25.1 192 110-307 6-231 (312)
343 2woz_A Kelch repeat and BTB do 93.1 3.3 0.00011 34.5 21.5 201 123-339 25-263 (318)
344 2be1_A Serine/threonine-protei 93.1 0.47 1.6E-05 40.4 8.9 117 196-316 10-139 (339)
345 2woz_A Kelch repeat and BTB do 92.7 3.8 0.00013 34.1 20.5 142 109-257 54-231 (318)
346 3no0_A DNA gyrase subunit A; D 92.4 4 0.00014 33.5 18.7 147 155-307 80-246 (276)
347 2zwa_A Leucine carboxyl methyl 92.3 7.6 0.00026 36.7 19.4 187 67-257 396-635 (695)
348 2zwa_A Leucine carboxyl methyl 92.2 7.8 0.00027 36.6 21.0 199 110-310 396-638 (695)
349 3ott_A Two-component system se 91.8 9 0.00031 36.4 31.7 226 58-304 63-304 (758)
350 3ott_A Two-component system se 91.8 9.2 0.00031 36.4 34.7 261 58-334 146-434 (758)
351 3qhy_B Beta-lactamase inhibito 91.4 5.2 0.00018 32.9 20.0 217 102-346 25-243 (282)
352 1cru_A Protein (soluble quinop 91.4 7.4 0.00025 34.5 28.7 62 57-118 26-97 (454)
353 2wg3_C Hedgehog-interacting pr 90.4 6.5 0.00022 35.0 13.6 112 228-340 15-160 (463)
354 3sbq_A Nitrous-oxide reductase 89.3 0.88 3E-05 41.3 6.9 75 229-308 325-409 (638)
355 3uc1_A DNA gyrase subunit A; D 88.7 10 0.00034 32.0 22.4 156 101-258 95-280 (327)
356 3s25_A Hypothetical 7-bladed b 84.1 17 0.00058 30.2 19.3 173 65-256 60-254 (302)
357 3no0_A DNA gyrase subunit A; D 83.8 17 0.00057 29.8 18.1 120 184-307 67-196 (276)
358 3b7f_A Glycosyl hydrolase, BNR 81.5 25 0.00085 30.2 25.8 137 186-327 233-391 (394)
359 3sbq_A Nitrous-oxide reductase 78.1 12 0.00043 34.1 9.2 69 147-215 327-408 (638)
360 4gq2_M Nucleoporin NUP120; bet 75.5 19 0.00064 35.4 10.6 37 102-138 237-273 (950)
361 3b7f_A Glycosyl hydrolase, BNR 71.0 49 0.0017 28.3 29.4 62 186-248 178-254 (394)
362 4fhn_B Nucleoporin NUP120; pro 70.2 16 0.00056 36.7 9.0 37 102-138 239-275 (1139)
363 1zi0_A DNA gyrase subunit A; b 69.7 47 0.0016 27.5 25.7 235 68-307 2-277 (307)
364 1suu_A DNA gyrase subunit A; t 67.6 52 0.0018 27.3 26.4 189 67-258 6-232 (312)
365 3zwu_A Alkaline phosphatase PH 67.1 23 0.00078 32.6 8.5 58 279-336 478-548 (592)
366 3qhy_B Beta-lactamase inhibito 67.1 50 0.0017 26.9 17.9 204 78-307 41-246 (282)
367 2wg3_C Hedgehog-interacting pr 65.0 75 0.0026 28.2 27.0 54 58-111 14-79 (463)
368 4gq2_M Nucleoporin NUP120; bet 64.8 11 0.00037 37.1 6.3 37 278-314 237-273 (950)
369 1zvt_A Topoisomerase IV subuni 62.4 59 0.002 26.1 19.0 77 184-261 83-167 (256)
370 4a9v_A PHOX; hydrolase, beta-p 62.1 45 0.0016 30.5 9.3 59 278-336 477-548 (592)
371 4fhn_B Nucleoporin NUP120; pro 53.7 11 0.00038 37.9 4.4 36 279-314 240-275 (1139)
372 3q6k_A 43.2 kDa salivary prote 53.2 1.1E+02 0.0037 26.3 20.1 167 166-337 124-342 (381)
373 3f7f_A Nucleoporin NUP120; nuc 52.5 24 0.00083 33.2 6.0 36 102-139 223-258 (729)
374 3zwu_A Alkaline phosphatase PH 47.8 79 0.0027 29.1 8.6 58 187-244 478-548 (592)
375 1wp5_A Topoisomerase IV; broke 46.2 1.3E+02 0.0044 25.1 24.9 238 67-307 3-277 (323)
376 4a9v_A PHOX; hydrolase, beta-p 45.7 1.2E+02 0.0041 27.8 9.2 60 186-245 477-549 (592)
377 3f7f_A Nucleoporin NUP120; nuc 43.0 28 0.00095 32.8 4.9 30 286-315 229-258 (729)
378 3l6v_A GYRA, DNA gyrase subuni 42.4 1.6E+02 0.0055 25.1 27.6 238 66-305 4-314 (370)
379 1zvt_A Topoisomerase IV subuni 34.3 1.8E+02 0.006 23.2 13.7 144 198-345 4-159 (256)
380 1zvu_A Topoisomerase IV subuni 33.4 3.1E+02 0.011 25.8 17.7 78 184-262 553-638 (716)
381 4hvt_A Ritya.17583.B, post-pro 30.4 3.5E+02 0.012 25.5 21.9 219 104-331 132-408 (711)
382 1q47_A Semaphorin 3A; beta pro 24.5 2.3E+02 0.0079 25.3 7.5 67 186-252 405-487 (495)
383 1q47_A Semaphorin 3A; beta pro 20.3 4.6E+02 0.016 23.3 8.7 68 59-126 405-487 (495)
No 1
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=7.6e-51 Score=365.52 Aligned_cols=288 Identities=26% Similarity=0.458 Sum_probs=263.7
Q ss_pred eeEecCccccEEEEEECCCCCeEEEeeCCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEEC
Q 019006 50 IMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDV 129 (347)
Q Consensus 50 ~~~~~~h~~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~ 129 (347)
...+.+|.+.|++++|+|++++|++|+.||+|++||+.. ......+.+|...|.+++|+|++++|++|+.|++|++||+
T Consensus 101 ~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~-~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~ 179 (410)
T 1vyh_C 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYET-GDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDF 179 (410)
T ss_dssp SCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTT-CCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEET
T ss_pred eEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC-CcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeC
Confidence 457889999999999999999999999999999999864 3445678999999999999999999999999999999999
Q ss_pred CCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeecC-CCCceEEEEEcCCCCeEEEEecCCcE
Q 019006 130 ETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFP-DKYQITAVSFSDASDKIYTGGIDNDV 208 (347)
Q Consensus 130 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i 208 (347)
.+++.+..+..|...|.++++.+.+ .++++|+.|++|++||++++..+..+. +...+.++.+++++..+++|+.|+.|
T Consensus 180 ~~~~~~~~~~~h~~~V~~v~~~p~~-~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v 258 (410)
T 1vyh_C 180 QGFECIRTMHGHDHNVSSVSIMPNG-DHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTV 258 (410)
T ss_dssp TSSCEEECCCCCSSCEEEEEECSSS-SEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred CCCceeEEEcCCCCCEEEEEEeCCC-CEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeE
Confidence 9999999999999999999998865 578999999999999999988887765 45679999999999999999999999
Q ss_pred EEEeCCCCceEEEecCCCCceeEEEECCC--------------------CCEEEEEcCCCcEEEEeCCCCCCcCceeEEE
Q 019006 209 KVWDLRKGEVSMTLQGHQDMITGMSLSPD--------------------GSYLLTNGMDCKLCIWDMRPYAPQNRCVKIL 268 (347)
Q Consensus 209 ~iwd~~~~~~~~~~~~~~~~i~~v~~~~~--------------------~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~ 268 (347)
++||+++++....+.+|...|.+++|+|+ +.+|++++.|+.|++||++. ..++..+
T Consensus 259 ~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~----~~~~~~~ 334 (410)
T 1vyh_C 259 RVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVST----GMCLMTL 334 (410)
T ss_dssp EEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTT----TEEEEEE
T ss_pred EEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCC----CceEEEE
Confidence 99999999999999999999999999996 67899999999999999974 4556667
Q ss_pred eccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCCceeeEEecCCccCeeeEEEcCCCCEEEEecCCCcEEeecC
Q 019006 269 EGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGEI 347 (347)
Q Consensus 269 ~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~i~~~ 347 (347)
.+|. ..+.+++|+|+|++|++|+.||.|++||+.+++++..+.+|...|++++|+|++++|+|+|.|++|++|++
T Consensus 335 ~~h~----~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 335 VGHD----NWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWEC 409 (410)
T ss_dssp ECCS----SCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC-
T ss_pred ECCC----CcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeC
Confidence 6663 56889999999999999999999999999999999999999999999999999999999999999999985
No 2
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.2e-50 Score=350.80 Aligned_cols=288 Identities=22% Similarity=0.376 Sum_probs=257.5
Q ss_pred eEecCccccEEEEEECCC----CCeEEEeeCCCcEEEEeccCCC-eeeEEEeCcccceeEEEEcCCCCEEEEecCCCeEE
Q 019006 51 MLLTGHQSAVYTMKFNPA----GTVIASGSHDRDIFLWHVHGDC-KNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLR 125 (347)
Q Consensus 51 ~~~~~h~~~V~~v~~~~~----~~~l~s~~~d~~v~~w~~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~ 125 (347)
..+.+|.+.|++++|+|+ +.+|+||+.|++|++|++.... .....+.+|...|.+++|++++.++++++.|++|+
T Consensus 26 ~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~ 105 (321)
T 3ow8_A 26 KQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIR 105 (321)
T ss_dssp EETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEE
T ss_pred eecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEE
Confidence 456799999999999985 5799999999999999986442 23346889999999999999999999999999999
Q ss_pred EEECCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeecC-CCCceEEEEEcCCCCeEEEEec
Q 019006 126 AWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFP-DKYQITAVSFSDASDKIYTGGI 204 (347)
Q Consensus 126 iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~ 204 (347)
+||+.+++.+..+..+...+..+++++++ .++++|+.|+.+++||++.+.....+. +...+.+++|+|+++++++|+.
T Consensus 106 lWd~~~~~~~~~~~~~~~~~~~~~~spdg-~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~ 184 (321)
T 3ow8_A 106 LWDLENGKQIKSIDAGPVDAWTLAFSPDS-QYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAI 184 (321)
T ss_dssp EEETTTTEEEEEEECCTTCCCCEEECTTS-SEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEET
T ss_pred EEECCCCCEEEEEeCCCccEEEEEECCCC-CEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcC
Confidence 99999999988888888888888888765 588999999999999999887776654 4457999999999999999999
Q ss_pred CCcEEEEeCCCCceEEEecCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEeccccccccceEEEEE
Q 019006 205 DNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGW 284 (347)
Q Consensus 205 dg~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (347)
||.|++||+++++....+.+|...|.+++|+|++++|++++.|+.|++||++. ......+.+|. ..+.+++|
T Consensus 185 dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~----~~~~~~~~~h~----~~v~~~~~ 256 (321)
T 3ow8_A 185 DGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQH----ANLAGTLSGHA----SWVLNVAF 256 (321)
T ss_dssp TSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTT----CCEEEEECCCS----SCEEEEEE
T ss_pred CCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCC----cceeEEEcCCC----CceEEEEE
Confidence 99999999999999999999999999999999999999999999999999974 33455666653 56899999
Q ss_pred CCCCCEEEEeeCCCeEEEEeCCCceeeEEecCCccCeeeEEEcCCCCEEEEecCCCcEEeecC
Q 019006 285 SPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGEI 347 (347)
Q Consensus 285 s~~g~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~i~~~ 347 (347)
+|++.+|++|+.|+.|++||+.+++++..+.+|...|..++|+|++..|++++.|++|++||+
T Consensus 257 sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~ 319 (321)
T 3ow8_A 257 CPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDC 319 (321)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEEC
T ss_pred CCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeC
Confidence 999999999999999999999999999999999999999999999999999999999999985
No 3
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=6.8e-50 Score=350.61 Aligned_cols=290 Identities=19% Similarity=0.356 Sum_probs=256.9
Q ss_pred cCeeEecCccccEEEEEECCCCCeEEEeeCCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEE
Q 019006 48 SPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAW 127 (347)
Q Consensus 48 ~~~~~~~~h~~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw 127 (347)
.....+.+|.+.|++++|+|++++|++|+.||+|++|+... ......+..|...|.+++|+|++++|++++.|+.+++|
T Consensus 46 ~~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~-~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw 124 (340)
T 1got_B 46 RTRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYT-TNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIY 124 (340)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTT-CCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEE
T ss_pred hhheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCC-CCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEE
Confidence 34567899999999999999999999999999999999864 34556788999999999999999999999999999999
Q ss_pred ECCCCc----eeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeecC-CCCceEEEEEcCCCCeEEEE
Q 019006 128 DVETGK----QIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFP-DKYQITAVSFSDASDKIYTG 202 (347)
Q Consensus 128 d~~~~~----~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~ 202 (347)
++.+.. ....+..|...+..+.+.+.+ .+++++.|++|++||++++..+..+. +...|.+++|+|++.++++|
T Consensus 125 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~--~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg 202 (340)
T 1got_B 125 NLKTREGNVRVSRELAGHTGYLSCCRFLDDN--QIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSG 202 (340)
T ss_dssp ETTTCSBSCEEEEEEECCSSCEEEEEEEETT--EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred ECccCCCcceeEEEecCCCccEEEEEECCCC--cEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEE
Confidence 997653 445677888888888876553 58899999999999999988877775 55789999999999999999
Q ss_pred ecCCcEEEEeCCCCceEEEecCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEeccccccccceEEE
Q 019006 203 GIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKC 282 (347)
Q Consensus 203 ~~dg~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (347)
+.|+.|++||++++.....+.+|...|++++|+|++++|++++.|+.|++||++.. ..+..+... .....+.++
T Consensus 203 ~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~----~~~~~~~~~--~~~~~v~~~ 276 (340)
T 1got_B 203 ACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRAD----QELMTYSHD--NIICGITSV 276 (340)
T ss_dssp ETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT----EEEEEECCT--TCCSCEEEE
T ss_pred eCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCC----cEEEEEccC--CcccceEEE
Confidence 99999999999999999999999999999999999999999999999999999742 223333211 123468999
Q ss_pred EECCCCCEEEEeeCCCeEEEEeCCCceeeEEecCCccCeeeEEEcCCCCEEEEecCCCcEEeec
Q 019006 283 GWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGE 346 (347)
Q Consensus 283 ~~s~~g~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~i~~ 346 (347)
+|+|+|++|++|+.||.|++||..+++.+..+.+|.+.|.+++|+|++.+|+|+|.|++|+|||
T Consensus 277 ~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 277 SFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp EECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EECCCCCEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 9999999999999999999999999999999999999999999999999999999999999997
No 4
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=8.1e-50 Score=355.38 Aligned_cols=293 Identities=21% Similarity=0.391 Sum_probs=253.7
Q ss_pred eeEecCccccEEEEEECCCCCeEEEeeCCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEEC
Q 019006 50 IMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDV 129 (347)
Q Consensus 50 ~~~~~~h~~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~ 129 (347)
...|.||.+.|++++|+|++++|+||+.|++|++||... ......+.+|...|.+++|+|++++|++|+.|+.+++||+
T Consensus 59 ~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~-~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~ 137 (380)
T 3iz6_a 59 CRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALT-SQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNL 137 (380)
T ss_dssp EEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTT-TEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEEC
T ss_pred eecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCC-CccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEEC
Confidence 467899999999999999999999999999999999864 4556778999999999999999999999999999999998
Q ss_pred CCCc-------eeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeec------CCCCceEEEEEcC-C
Q 019006 130 ETGK-------QIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTF------PDKYQITAVSFSD-A 195 (347)
Q Consensus 130 ~~~~-------~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~------~~~~~v~~~~~~~-~ 195 (347)
.+.. ....+..|...+..+.+.+.....+++|+.|++|++||++++..+..+ .+...+.++.+++ +
T Consensus 138 ~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 217 (380)
T 3iz6_a 138 SSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLN 217 (380)
T ss_dssp CCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSS
T ss_pred CCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCC
Confidence 6532 234567788888888888877778999999999999999998877655 2456799999976 7
Q ss_pred CCeEEEEecCCcEEEEeCC-CCceEEEecCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEeccccc
Q 019006 196 SDKIYTGGIDNDVKVWDLR-KGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHN 274 (347)
Q Consensus 196 ~~~l~~~~~dg~i~iwd~~-~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~ 274 (347)
+..+++|+.|+.|++||++ ..+....+.+|...|++++|+|++++|++++.|++|++||++.. ..+..+..+...
T Consensus 218 ~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~----~~~~~~~~~~~~ 293 (380)
T 3iz6_a 218 ANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTG----HQLQVYNREPDR 293 (380)
T ss_dssp CCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTT----EEEEEECCCCSS
T ss_pred CCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCC----cEEEEecccccc
Confidence 7899999999999999998 45677888999999999999999999999999999999999843 334444332211
Q ss_pred ---cccceEEEEECCCCCEEEEeeCCCeEEEEeCCCceeeEEe----cCCccCeeeEEEcCCCCEEEEecCCCcEEeecC
Q 019006 275 ---FEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKL----PGHTGSVNESVFHATEPVIGSCSSDKQIYLGEI 347 (347)
Q Consensus 275 ---~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~~~~----~~h~~~v~~~~~~~~~~~l~s~s~D~~i~i~~~ 347 (347)
....+.+++|+|+|++|++|+.||.|++||...++.+..+ .+|.+.|.+++|+|++.+|+|+|.|++|++|++
T Consensus 294 ~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~ 373 (380)
T 3iz6_a 294 NDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAF 373 (380)
T ss_dssp SCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEEC
T ss_pred cccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEec
Confidence 1124789999999999999999999999999998888777 689999999999999999999999999999985
No 5
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=2.1e-48 Score=342.93 Aligned_cols=291 Identities=20% Similarity=0.346 Sum_probs=255.1
Q ss_pred cCeeEecCccccEEEEEECCCCCeEEEeeCCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEE
Q 019006 48 SPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAW 127 (347)
Q Consensus 48 ~~~~~~~~h~~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw 127 (347)
.....+.||.+.|++++|+|++++||||+.||+|++||.... .....+..|...|.+++|+|++.+|++++.|+.+++|
T Consensus 55 ~~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~-~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~ 133 (354)
T 2pbi_B 55 KTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTT-NKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVY 133 (354)
T ss_dssp CEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC-CEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEE
T ss_pred EEEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCC-CcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEE
Confidence 445678999999999999999999999999999999998643 3455677888999999999999999999999999999
Q ss_pred ECCCC------ceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeecC-CCCceEEEEEcC--CCCe
Q 019006 128 DVETG------KQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFP-DKYQITAVSFSD--ASDK 198 (347)
Q Consensus 128 d~~~~------~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~--~~~~ 198 (347)
++... .....+..|...+..+.+.+.+ ..+++++.|++|++||+++++.+..+. +...+.++.++| ++..
T Consensus 134 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~ 212 (354)
T 2pbi_B 134 PLTFDKNENMAAKKKSVAMHTNYLSACSFTNSD-MQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNT 212 (354)
T ss_dssp ECCCCTTCCSGGGCEEEEECSSCEEEEEECSSS-SEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCE
T ss_pred EEeccccccccccceeeeccCCcEEEEEEeCCC-CEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCE
Confidence 98643 2345566788899988888765 578899999999999999998887775 556899999987 4679
Q ss_pred EEEEecCCcEEEEeCCCCceEEEecCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEeccccccccc
Q 019006 199 IYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKN 278 (347)
Q Consensus 199 l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~ 278 (347)
+++|+.||.|++||+++++....+.+|...|++++|+|++++|++++.|++|++||++.. ..+..+..+. ....
T Consensus 213 l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~----~~~~~~~~~~--~~~~ 286 (354)
T 2pbi_B 213 FVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRAD----REVAIYSKES--IIFG 286 (354)
T ss_dssp EEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT----EEEEEECCTT--CCSC
T ss_pred EEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCC----cEEEEEcCCC--cccc
Confidence 999999999999999999999999999999999999999999999999999999999742 2333333222 2235
Q ss_pred eEEEEECCCCCEEEEeeCCCeEEEEeCCCceeeEEecCCccCeeeEEEcCCCCEEEEecCCCcEEeec
Q 019006 279 LLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGE 346 (347)
Q Consensus 279 ~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~i~~ 346 (347)
+.+++|+|+|.+|++|+.|+.|++||+.+++.+..+.+|.+.|.+++|+|++++|++++.|++|+||+
T Consensus 287 ~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 287 ASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred eeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 78899999999999999999999999999999999999999999999999999999999999999996
No 6
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1.8e-47 Score=332.27 Aligned_cols=287 Identities=24% Similarity=0.415 Sum_probs=249.2
Q ss_pred eeEecCccccEEEEEECCCC-CeEEEeeCCCcEEEEeccCCC----eeeEEEeCcccceeEEEEcCCCCEEEEecCCCeE
Q 019006 50 IMLLTGHQSAVYTMKFNPAG-TVIASGSHDRDIFLWHVHGDC----KNFMVLKGHKNAILDLHWTTDGSQIISASPDKTL 124 (347)
Q Consensus 50 ~~~~~~h~~~V~~v~~~~~~-~~l~s~~~d~~v~~w~~~~~~----~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i 124 (347)
...|.||.+.|++++|+|++ ++|++|+.|++|++|++.+.. .+...+.+|...|.+++|+|++++|++++.|++|
T Consensus 10 ~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v 89 (319)
T 3frx_A 10 RGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTL 89 (319)
T ss_dssp EEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred EEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEE
Confidence 45688999999999999965 899999999999999985321 2345788999999999999999999999999999
Q ss_pred EEEECCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeecCCCCceEEEEEcCC------CCe
Q 019006 125 RAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDA------SDK 198 (347)
Q Consensus 125 ~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~------~~~ 198 (347)
++||+.+++.+..+..|...|.++.+.+.+ .++++|+.|++|++||++.........+...+.++.+.|. +..
T Consensus 90 ~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~s~D~~i~vwd~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~ 168 (319)
T 3frx_A 90 RLWDVATGETYQRFVGHKSDVMSVDIDKKA-SMIISGSRDKTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVT 168 (319)
T ss_dssp EEEETTTTEEEEEEECCSSCEEEEEECTTS-CEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECCC------CCE
T ss_pred EEEECCCCCeeEEEccCCCcEEEEEEcCCC-CEEEEEeCCCeEEEEECCCCeEEEEeccCCcEEEEEEccCCCCCCCccE
Confidence 999999999999999999999999988765 5899999999999999976544444456678999999985 348
Q ss_pred EEEEecCCcEEEEeCCCCceEEEecCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEeccccccccc
Q 019006 199 IYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKN 278 (347)
Q Consensus 199 l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~ 278 (347)
+++++.|+.|++||+++.+....+.+|...|.+++|+|++++|++++.|+.|++||++. ..++..+..+ ..
T Consensus 169 l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~----~~~~~~~~~~-----~~ 239 (319)
T 3frx_A 169 IISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAA----KKAMYTLSAQ-----DE 239 (319)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTT----TEEEEEEECC-----SC
T ss_pred EEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC----CcEEEEecCC-----Cc
Confidence 99999999999999999999899999999999999999999999999999999999974 3344444432 46
Q ss_pred eEEEEECCCCCEEEEeeCCCeEEEEeCCCceeeEEec--------CCccCeeeEEEcCCCCEEEEecCCCcEEeecC
Q 019006 279 LLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLP--------GHTGSVNESVFHATEPVIGSCSSDKQIYLGEI 347 (347)
Q Consensus 279 ~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~~~~~--------~h~~~v~~~~~~~~~~~l~s~s~D~~i~i~~~ 347 (347)
+.+++|+|++.+|++++.+ .+++|++..+..+..+. .|...+.+++|+|++++|++++.|+.|+|||+
T Consensus 240 v~~~~~sp~~~~la~~~~~-~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~ 315 (319)
T 3frx_A 240 VFSLAFSPNRYWLAAATAT-GIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQV 315 (319)
T ss_dssp EEEEEECSSSSEEEEEETT-EEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEE
T ss_pred EEEEEEcCCCCEEEEEcCC-CcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEEE
Confidence 8999999999999998866 59999999887776654 34567899999999999999999999999985
No 7
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=5e-47 Score=327.23 Aligned_cols=285 Identities=24% Similarity=0.373 Sum_probs=249.6
Q ss_pred CeeEecCccccEEEEEECCCCCeEEEeeCCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEE
Q 019006 49 PIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWD 128 (347)
Q Consensus 49 ~~~~~~~h~~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd 128 (347)
...++.+|.+.|++++|+|++++|++|+.||+|++||+.. ......+..|...|.+++|+|++++|++|+.|++|++||
T Consensus 5 ~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd 83 (304)
T 2ynn_A 5 IKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYET-QVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFN 83 (304)
T ss_dssp CEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTT-TEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEE
T ss_pred eEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCC-CceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEE
Confidence 3567899999999999999999999999999999999964 456677889999999999999999999999999999999
Q ss_pred CCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCc-eeec-CCCCceEEEEEcC-CCCeEEEEecC
Q 019006 129 VETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGA-IQTF-PDKYQITAVSFSD-ASDKIYTGGID 205 (347)
Q Consensus 129 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~-~~~~-~~~~~v~~~~~~~-~~~~l~~~~~d 205 (347)
+.+++.+..+..|...|.++++++.+ .++++|+.|++|++||++++.. ...+ .+...|.+++|+| ++..+++|+.|
T Consensus 84 ~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D 162 (304)
T 2ynn_A 84 YNTGEKVVDFEAHPDYIRSIAVHPTK-PYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLD 162 (304)
T ss_dssp TTTCCEEEEEECCSSCEEEEEECSSS-SEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETT
T ss_pred CCCCcEEEEEeCCCCcEEEEEEcCCC-CEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCC
Confidence 99999999999999999999998875 5889999999999999987643 3444 4567899999999 56899999999
Q ss_pred CcEEEEeCCCCceEEEec-CCCCceeEEEECC--CCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEeccccccccceEEE
Q 019006 206 NDVKVWDLRKGEVSMTLQ-GHQDMITGMSLSP--DGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKC 282 (347)
Q Consensus 206 g~i~iwd~~~~~~~~~~~-~~~~~i~~v~~~~--~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (347)
+.|++||++.+.....+. +|...+..+.|+| ++++|++++.|++|++||++. ..++..+.+|. ..+..+
T Consensus 163 ~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~----~~~~~~~~~h~----~~v~~~ 234 (304)
T 2ynn_A 163 RTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQT----KSCVATLEGHM----SNVSFA 234 (304)
T ss_dssp SEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTT----TEEEEEEECCS----SCEEEE
T ss_pred CeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCC----CccceeeCCCC----CCEEEE
Confidence 999999998877665554 4557789999987 678999999999999999974 45667777764 568899
Q ss_pred EECCCCCEEEEeeCCCeEEEEeCCCceeeEEecCCccCeeeEEEcCCCC--EEEEecCCCcEE
Q 019006 283 GWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEP--VIGSCSSDKQIY 343 (347)
Q Consensus 283 ~~s~~g~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~--~l~s~s~D~~i~ 343 (347)
+|+|++++|++|+.||.|++||..+++++..+..|...+++++|+|++. ++++++.||.+.
T Consensus 235 ~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~g~~~ 297 (304)
T 2ynn_A 235 VFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTV 297 (304)
T ss_dssp EECSSSSEEEEEETTSCEEEEETTTCCEEEEECCSSSSEEEEEECTTCGGGCEEEEETTEEEE
T ss_pred EECCCCCEEEEEcCCCeEEEEECCCCceeeeccCCCccEEEEEECCCCCceEEEEecCCceEE
Confidence 9999999999999999999999999999999999999999999999885 577777776543
No 8
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=3.8e-47 Score=333.77 Aligned_cols=295 Identities=20% Similarity=0.413 Sum_probs=245.0
Q ss_pred CeeEecCccc-cEEEEEECCCCCeEEEeeCCCcEEEEeccCCCee--eEEEeCcccceeEEEEcCCCCEEEEecCCCeEE
Q 019006 49 PIMLLTGHQS-AVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKN--FMVLKGHKNAILDLHWTTDGSQIISASPDKTLR 125 (347)
Q Consensus 49 ~~~~~~~h~~-~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~--~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~ 125 (347)
.+..+.+|.. .|++++|+|+|++||+|+.|++|++|++.+.... .....+|...|.+++|+|++++|++++.|++++
T Consensus 7 ~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~ 86 (345)
T 3fm0_A 7 LLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTC 86 (345)
T ss_dssp EEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred EeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEE
Confidence 3456889988 9999999999999999999999999999754221 223468999999999999999999999999999
Q ss_pred EEECCCCc--eeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCc---eeec-CCCCceEEEEEcCCCCeE
Q 019006 126 AWDVETGK--QIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGA---IQTF-PDKYQITAVSFSDASDKI 199 (347)
Q Consensus 126 iwd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~---~~~~-~~~~~v~~~~~~~~~~~l 199 (347)
+|++..+. .+..+..|...|.++++++++ .++++|+.|++|++||++.+.. +..+ .+...|.+++|+|++.+|
T Consensus 87 iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~-~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l 165 (345)
T 3fm0_A 87 IWKKNQDDFECVTTLEGHENEVKSVAWAPSG-NLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELL 165 (345)
T ss_dssp EEEECCC-EEEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCE
T ss_pred EEEccCCCeEEEEEccCCCCCceEEEEeCCC-CEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEE
Confidence 99987763 466788899999999998865 6899999999999999987643 2333 356789999999999999
Q ss_pred EEEecCCcEEEEeCCCCc--eEEEecCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCc-----------CceeE
Q 019006 200 YTGGIDNDVKVWDLRKGE--VSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQ-----------NRCVK 266 (347)
Q Consensus 200 ~~~~~dg~i~iwd~~~~~--~~~~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~-----------~~~~~ 266 (347)
++++.|+.|++||.+.++ ....+.+|...|++++|+|++++|++++.|++|++||....... ..++.
T Consensus 166 ~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~ 245 (345)
T 3fm0_A 166 ASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCIC 245 (345)
T ss_dssp EEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEE
T ss_pred EEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccceeE
Confidence 999999999999998775 45678999999999999999999999999999999997432111 12223
Q ss_pred EEeccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCCce---------eeEEecCCccCeeeEEEcCCCC-EEEEe
Q 019006 267 ILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRR---------ILYKLPGHTGSVNESVFHATEP-VIGSC 336 (347)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~---------~~~~~~~h~~~v~~~~~~~~~~-~l~s~ 336 (347)
.+.+. ....+.+++|+|++..|++++.|+.|++|+...+. ......+|...|++++|+|+++ +|||+
T Consensus 246 ~~~~~---h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~ 322 (345)
T 3fm0_A 246 TLSGF---HSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASC 322 (345)
T ss_dssp EECSS---CSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEE
T ss_pred EecCC---CCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEc
Confidence 33331 24578999999999999999999999999986542 1223468999999999999985 99999
Q ss_pred cCCCcEEeecC
Q 019006 337 SSDKQIYLGEI 347 (347)
Q Consensus 337 s~D~~i~i~~~ 347 (347)
|.||+|++|++
T Consensus 323 s~Dg~v~~W~~ 333 (345)
T 3fm0_A 323 SDDGEVAFWKY 333 (345)
T ss_dssp ETTSCEEEEEE
T ss_pred CCCCcEEEEEe
Confidence 99999999984
No 9
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=4.5e-46 Score=322.33 Aligned_cols=293 Identities=33% Similarity=0.587 Sum_probs=255.4
Q ss_pred cCeeEecCccccEEEEEECCCCCeEEEeeCCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEE
Q 019006 48 SPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAW 127 (347)
Q Consensus 48 ~~~~~~~~h~~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw 127 (347)
.+...+.+|...|++++|+|++++|++|+.||.|++|+... ......+.+|...|.+++|+|++++|++++.|+.|++|
T Consensus 14 ~~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vw 92 (312)
T 4ery_A 14 ALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD-GKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIW 92 (312)
T ss_dssp EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-CCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred eeEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCC-cccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEE
Confidence 34567889999999999999999999999999999999854 34556788999999999999999999999999999999
Q ss_pred ECCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeecC-CCCceEEEEEcCCCCeEEEEecCC
Q 019006 128 DVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFP-DKYQITAVSFSDASDKIYTGGIDN 206 (347)
Q Consensus 128 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg 206 (347)
|+.+++.+..+..|...+..+.+.+.+ .++++|+.|++|++||+++++.+..+. +...+.++.|+|++..+++++.||
T Consensus 93 d~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 171 (312)
T 4ery_A 93 DVSSGKCLKTLKGHSNYVFCCNFNPQS-NLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG 171 (312)
T ss_dssp ETTTCCEEEEEECCSSCEEEEEECSSS-SEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred ECCCCcEEEEEcCCCCCEEEEEEcCCC-CEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCC
Confidence 999999999999999999998888765 588999999999999999888877775 456899999999999999999999
Q ss_pred cEEEEeCCCCceEEEec-CCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEeccccccccceEEEEEC
Q 019006 207 DVKVWDLRKGEVSMTLQ-GHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWS 285 (347)
Q Consensus 207 ~i~iwd~~~~~~~~~~~-~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 285 (347)
.|++||+++++....+. .+...+..++|+|++++|++++.|+.|++||++. ..+...+.+|.... ..+......
T Consensus 172 ~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~----~~~~~~~~~~~~~~-~~~~~~~~~ 246 (312)
T 4ery_A 172 LCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSK----GKCLKTYTGHKNEK-YCIFANFSV 246 (312)
T ss_dssp CEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTT----TEEEEEECSSCCSS-SCCCEEEEC
T ss_pred cEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCC----CcEEEEEEecCCce-EEEEEEEEe
Confidence 99999999988776654 4566799999999999999999999999999974 34555666554321 122223345
Q ss_pred CCCCEEEEeeCCCeEEEEeCCCceeeEEecCCccCeeeEEEcCCCCEEEEec--CCCcEEeecC
Q 019006 286 PDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCS--SDKQIYLGEI 347 (347)
Q Consensus 286 ~~g~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s--~D~~i~i~~~ 347 (347)
+++.+|++|+.||.|++||+.+++++..+.+|...|..++|+|+++++++++ .|++|++|+.
T Consensus 247 ~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~ 310 (312)
T 4ery_A 247 TGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKS 310 (312)
T ss_dssp SSSCEEEECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSSSSEEEEEECTTTCCEEEEEC
T ss_pred CCCcEEEEECCCCEEEEEECCCchhhhhhhccCCcEEEEeecCcCCceEEEEccCCccEEEecC
Confidence 7889999999999999999999999999999999999999999999999987 6999999974
No 10
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=4e-46 Score=327.08 Aligned_cols=287 Identities=24% Similarity=0.378 Sum_probs=242.4
Q ss_pred eeEecCccccEEEEEE-----CC-CCCeEEEeeCCCcEEEEeccCC------CeeeEEEeCcccceeEEEEcCCCCEEEE
Q 019006 50 IMLLTGHQSAVYTMKF-----NP-AGTVIASGSHDRDIFLWHVHGD------CKNFMVLKGHKNAILDLHWTTDGSQIIS 117 (347)
Q Consensus 50 ~~~~~~h~~~V~~v~~-----~~-~~~~l~s~~~d~~v~~w~~~~~------~~~~~~~~~h~~~v~~~~~~~~~~~l~s 117 (347)
...+.||.+.|++++| ++ ++++||+|+.|++|++|++... ......+.+|...|.+++|+|++.++++
T Consensus 14 ~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s 93 (343)
T 2xzm_R 14 RGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAIS 93 (343)
T ss_dssp EEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEE
T ss_pred eeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEE
Confidence 4578999999999999 76 8999999999999999998632 1334568899999999999999999999
Q ss_pred ecCCCeEEEEECCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeec---CCCCceEEEEEcC
Q 019006 118 ASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTF---PDKYQITAVSFSD 194 (347)
Q Consensus 118 ~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~---~~~~~v~~~~~~~ 194 (347)
++.|++|++||+.+++.+..+..|...|.++++++++ .++++++.|++|++||+......... .+...+.++.|+|
T Consensus 94 ~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~-~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~ 172 (343)
T 2xzm_R 94 SSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDN-RQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRYSP 172 (343)
T ss_dssp EETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSST-TEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEECC
T ss_pred EcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCC-CEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeeecc
Confidence 9999999999999999999999999999999998875 57899999999999999744332222 3456799999999
Q ss_pred CC----------CeEEEEecCCcEEEEeCCCCceEEEecCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCce
Q 019006 195 AS----------DKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRC 264 (347)
Q Consensus 195 ~~----------~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~ 264 (347)
++ .++++++.|+.|++||. ..+....+.+|...|.+++|+|++++|++++.|+.|++||++.... .
T Consensus 173 ~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~---~ 248 (343)
T 2xzm_R 173 IMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTY---P 248 (343)
T ss_dssp CCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSS---C
T ss_pred ccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCcc---c
Confidence 87 68999999999999994 5667778889999999999999999999999999999999853221 1
Q ss_pred eEEEeccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCCceeeE--Eec-----------CCccCeeeEEEcCCCC
Q 019006 265 VKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILY--KLP-----------GHTGSVNESVFHATEP 331 (347)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~~--~~~-----------~h~~~v~~~~~~~~~~ 331 (347)
...+.. ...+.+++|+|++.+|++|+ |+.|++||+.+++... .+. +|...|.+++|+|+++
T Consensus 249 ~~~~~~-----~~~v~~v~~sp~~~~la~~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~ 322 (343)
T 2xzm_R 249 QREFDA-----GSTINQIAFNPKLQWVAVGT-DQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGK 322 (343)
T ss_dssp SEEEEC-----SSCEEEEEECSSSCEEEEEE-SSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSC
T ss_pred ceeecC-----CCcEEEEEECCCCCEEEEEC-CCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCC
Confidence 222221 23588999999999887664 7789999998766543 443 7888999999999999
Q ss_pred EEEEecCCCcEEeecC
Q 019006 332 VIGSCSSDKQIYLGEI 347 (347)
Q Consensus 332 ~l~s~s~D~~i~i~~~ 347 (347)
+|++++.||+|++|++
T Consensus 323 ~l~sg~~Dg~v~~w~~ 338 (343)
T 2xzm_R 323 KLFAGFTDGVIRTFSF 338 (343)
T ss_dssp CEEEEETTSEEEEEEE
T ss_pred eEEEecCCceEEEEEE
Confidence 9999999999999984
No 11
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=2.4e-46 Score=334.51 Aligned_cols=287 Identities=25% Similarity=0.419 Sum_probs=246.7
Q ss_pred cCccccEEEEEECCCCCeEEEeeCCCcEEEEeccCCCeeeEEEeCcc------------------cceeEEEEcCCCCEE
Q 019006 54 TGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHK------------------NAILDLHWTTDGSQI 115 (347)
Q Consensus 54 ~~h~~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~------------------~~v~~~~~~~~~~~l 115 (347)
.+|.+.|.+++|+|+|++||+|+ ++.+++|++... .....+..|. ..|.+++|+|++++|
T Consensus 61 ~~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l 138 (393)
T 1erj_A 61 LDHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDG-SLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFL 138 (393)
T ss_dssp EECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTC-CEEEEECC-----------------CCCCBEEEEEECTTSSEE
T ss_pred cCCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCC-CEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEE
Confidence 37999999999999999999976 689999998543 3333444332 248999999999999
Q ss_pred EEecCCCeEEEEECCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeecCCCCceEEEEEcC-
Q 019006 116 ISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSD- 194 (347)
Q Consensus 116 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~- 194 (347)
++|+.|+.|++||+.+++.+..+..|...|.++++++.+ .++++++.|++|++||++++.....+.....+.+++++|
T Consensus 139 ~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~-~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~ 217 (393)
T 1erj_A 139 ATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSG-DKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPG 217 (393)
T ss_dssp EEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECST
T ss_pred EEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCC-CEEEEecCCCcEEEEECCCCeeEEEEEcCCCcEEEEEECC
Confidence 999999999999999999888999999999999998875 578999999999999999988877777778899999999
Q ss_pred CCCeEEEEecCCcEEEEeCCCCceEEEe-------cCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCC-------
Q 019006 195 ASDKIYTGGIDNDVKVWDLRKGEVSMTL-------QGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAP------- 260 (347)
Q Consensus 195 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~-------~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~------- 260 (347)
++.++++|+.|+.|++||+++++....+ .+|...|.+++|+|++++|++++.|+.|++||++....
T Consensus 218 ~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~ 297 (393)
T 1erj_A 218 DGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTP 297 (393)
T ss_dssp TCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC------------
T ss_pred CCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCC
Confidence 8899999999999999999998877666 57889999999999999999999999999999975321
Q ss_pred -cCceeEEEeccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCCceeeEEecCCccCeeeEEEcC------CCCEE
Q 019006 261 -QNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHA------TEPVI 333 (347)
Q Consensus 261 -~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~------~~~~l 333 (347)
...+...+.+| ...+.+++|+|++.+|++|+.||.|++||..+++.+..+.+|.+.|.+++|++ ++.+|
T Consensus 298 ~~~~~~~~~~~h----~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l 373 (393)
T 1erj_A 298 NSGTCEVTYIGH----KDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVF 373 (393)
T ss_dssp ---CEEEEEECC----SSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEE
T ss_pred CCCcceEEEecc----cCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEEecCCcCcCCCCCEE
Confidence 12233444454 35689999999999999999999999999999999999999999999999886 67899
Q ss_pred EEecCCCcEEeecC
Q 019006 334 GSCSSDKQIYLGEI 347 (347)
Q Consensus 334 ~s~s~D~~i~i~~~ 347 (347)
+|+|.||+|+||++
T Consensus 374 ~sgs~Dg~i~iW~~ 387 (393)
T 1erj_A 374 ATGSGDCKARIWKY 387 (393)
T ss_dssp EEEETTSEEEEEEE
T ss_pred EEECCCCcEEECcc
Confidence 99999999999984
No 12
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1.2e-46 Score=329.95 Aligned_cols=281 Identities=17% Similarity=0.290 Sum_probs=232.3
Q ss_pred CccccEEEEEECCCCCeEEEeeCCCcEEEEecc---------C-CCeeeEEEeCcccceeEEEEcCCCCEEEEecCCCeE
Q 019006 55 GHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVH---------G-DCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTL 124 (347)
Q Consensus 55 ~h~~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~---------~-~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i 124 (347)
.|...|.+++|+|+|++|++++ |+++++|+.. . ..........|...|.+++|+|++ .|++|+.||+|
T Consensus 28 ~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~-~l~~~s~dg~v 105 (344)
T 4gqb_B 28 CMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER-GILVASDSGAV 105 (344)
T ss_dssp SCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT-EEEEEETTSEE
T ss_pred cccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC-eEEEEECCCEE
Confidence 5778899999999999999888 6778888631 0 001112233466789999999985 78899999999
Q ss_pred EEEECCCCceeee----eeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeecC-CCCceEEEEEcCCCC-e
Q 019006 125 RAWDVETGKQIKK----MAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFP-DKYQITAVSFSDASD-K 198 (347)
Q Consensus 125 ~iwd~~~~~~~~~----~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~-~ 198 (347)
++||+.+++.+.. ...|...|.++++++++ .++++|+.|++|++||+++++.+..+. |...|.+++|++++. .
T Consensus 106 ~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg-~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~ 184 (344)
T 4gqb_B 106 ELWELDENETLIVSKFCKYEHDDIVSTVSVLSSG-TQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSV 184 (344)
T ss_dssp EEEEECTTSSCEEEEEEEECCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTE
T ss_pred EEEeccCCCceeEeeccccCCCCCEEEEEECCCC-CEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCc
Confidence 9999998875433 34688999999998875 589999999999999999998888876 567899999999885 6
Q ss_pred EEEEecCCcEEEEeCCCCceEEEec--CCCCceeEEEECCC-CCEEEEEcCCCcEEEEeCCCCCCcCceeEEEecccccc
Q 019006 199 IYTGGIDNDVKVWDLRKGEVSMTLQ--GHQDMITGMSLSPD-GSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNF 275 (347)
Q Consensus 199 l~~~~~dg~i~iwd~~~~~~~~~~~--~~~~~i~~v~~~~~-~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~ 275 (347)
+++++.|++|++||+++++....+. .|...+.+++|+|+ ++++++++.|+.|++||++.. +++..+.+|.
T Consensus 185 l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~----~~~~~~~~h~--- 257 (344)
T 4gqb_B 185 FLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKST----SCVLSSAVHS--- 257 (344)
T ss_dssp EEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC------CCEEEECCS---
T ss_pred eeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCC----cEEEEEcCCC---
Confidence 7899999999999999998877664 34567899999995 568899999999999999853 4456677664
Q ss_pred ccceEEEEECCCC-CEEEEeeCCCeEEEEeCCCceeeEEecCCccCeeeEEEcCCCC-EEEEecCCCcEEeecC
Q 019006 276 EKNLLKCGWSPDG-SKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEP-VIGSCSSDKQIYLGEI 347 (347)
Q Consensus 276 ~~~~~~~~~s~~g-~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~s~D~~i~i~~~ 347 (347)
..|.+++|+|++ ++|++|+.|+.|+|||+.+++++ ++.+|.+.|++++|+|+++ +|+|+|.|++|++|++
T Consensus 258 -~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~-~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v 329 (344)
T 4gqb_B 258 -QCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELF-RSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVV 329 (344)
T ss_dssp -SCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEE-EECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEEC
T ss_pred -CCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEE-EEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEEC
Confidence 578999999998 57999999999999999998765 6789999999999999986 6789999999999985
No 13
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=3.6e-46 Score=328.98 Aligned_cols=284 Identities=15% Similarity=0.293 Sum_probs=230.4
Q ss_pred ecCccccEEEEEECCCCCeEEEeeC------CCcEEEEeccCCC---eeeEEEeCcccceeEEEEcCCCCEEEEecCCCe
Q 019006 53 LTGHQSAVYTMKFNPAGTVIASGSH------DRDIFLWHVHGDC---KNFMVLKGHKNAILDLHWTTDGSQIISASPDKT 123 (347)
Q Consensus 53 ~~~h~~~V~~v~~~~~~~~l~s~~~------d~~v~~w~~~~~~---~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~ 123 (347)
..+|+..|++++|+|||++||+|+. |+.|++|+..... .......+|...|.+++|+|++. +++++.||+
T Consensus 38 p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~-~l~~s~dg~ 116 (357)
T 4g56_B 38 PACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKG-ILVASDSGA 116 (357)
T ss_dssp --CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTE-EEEEETTSC
T ss_pred cccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCC-EEEEECCCE
Confidence 4589999999999999999999998 6789999874321 12234567889999999999875 566788999
Q ss_pred EEEEECCCCceee----eeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeecC-CCCceEEEEEcCCCC-
Q 019006 124 LRAWDVETGKQIK----KMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFP-DKYQITAVSFSDASD- 197 (347)
Q Consensus 124 i~iwd~~~~~~~~----~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~- 197 (347)
|++||+.+++... ....|...|.++++++++ .++++|+.|++|++||+++++.+..+. +...|.+++|++++.
T Consensus 117 v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg-~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~ 195 (357)
T 4g56_B 117 VELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDG-TQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDT 195 (357)
T ss_dssp EEEC--------CCCCEEECCCSSCEEEEEECSSS-SEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSS
T ss_pred EEEeeccccceeEEEeeccCCCCCCEEEEEECCCC-CEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCc
Confidence 9999998876432 234678889999998865 588999999999999999988887775 457899999999875
Q ss_pred eEEEEecCCcEEEEeCCCCceEEEe--cCCCCceeEEEECCC-CCEEEEEcCCCcEEEEeCCCCCCcCceeEEEeccccc
Q 019006 198 KIYTGGIDNDVKVWDLRKGEVSMTL--QGHQDMITGMSLSPD-GSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHN 274 (347)
Q Consensus 198 ~l~~~~~dg~i~iwd~~~~~~~~~~--~~~~~~i~~v~~~~~-~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~ 274 (347)
.+++++.|+.|++||+++++....+ ..|...+.+++|+|+ +.+|++++.|+.|++||++. ..+...+.+|.
T Consensus 196 ~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~----~~~~~~~~~~~-- 269 (357)
T 4g56_B 196 IFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKN----PDSAQTSAVHS-- 269 (357)
T ss_dssp CEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSC----GGGCEEECCCS--
T ss_pred eeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCC----CcEeEEEeccc--
Confidence 7889999999999999988766544 346677999999997 46888999999999999974 34455566553
Q ss_pred cccceEEEEECCCC-CEEEEeeCCCeEEEEeCCCceeeEEecCCccCeeeEEEcC-CCCEEEEecCCCcEEeecC
Q 019006 275 FEKNLLKCGWSPDG-SKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHA-TEPVIGSCSSDKQIYLGEI 347 (347)
Q Consensus 275 ~~~~~~~~~~s~~g-~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~s~D~~i~i~~~ 347 (347)
..+.+++|+|++ ++|++|+.||.|+|||+.+++++..+ +|.+.|++++|+| ++.+|+|+|.||+|++|++
T Consensus 270 --~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~-~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~ 341 (357)
T 4g56_B 270 --QNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL-SHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHL 341 (357)
T ss_dssp --SCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC-CCSSCEEEEEECSSSTTEEEEEETTSCEEEEEC
T ss_pred --eeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC-CCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEEC
Confidence 578999999987 57999999999999999999887654 8999999999998 7899999999999999986
No 14
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.7e-45 Score=318.55 Aligned_cols=292 Identities=18% Similarity=0.327 Sum_probs=232.8
Q ss_pred CeeEecCccccEEEEEECCCCCeEEEeeCCCcEEEEeccCC-CeeeEEE-eC-cccceeEEEEcCCCCEEEEecCCCeEE
Q 019006 49 PIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGD-CKNFMVL-KG-HKNAILDLHWTTDGSQIISASPDKTLR 125 (347)
Q Consensus 49 ~~~~~~~h~~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~-~~~~~~~-~~-h~~~v~~~~~~~~~~~l~s~~~dg~i~ 125 (347)
.+..+.+|.+.|++++|+|+ +||+|+.|++|++|++... ......+ .+ |...|.+++|+|++++|++++.|++|+
T Consensus 6 ~~~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~ 83 (330)
T 2hes_X 6 LIKSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVS 83 (330)
T ss_dssp EEEEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred cceeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEE
Confidence 35678899999999999987 9999999999999998643 2333344 34 999999999999999999999999999
Q ss_pred EEECCC-------CceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCC----Cceeec-CCCCceEEEEEc
Q 019006 126 AWDVET-------GKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQR----GAIQTF-PDKYQITAVSFS 193 (347)
Q Consensus 126 iwd~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~----~~~~~~-~~~~~v~~~~~~ 193 (347)
+||+.. .+.+..+..|...|.++++++++ .++++|+.|++|++||++.. ..+..+ .+...|.+++|+
T Consensus 84 iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g-~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~ 162 (330)
T 2hes_X 84 IWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDG-YYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWH 162 (330)
T ss_dssp EEEC-------CCCEEEEEEC----CEEEEEECTTS-CEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEEC
T ss_pred EEEcccCcCccccceeEEEEcCCCCcEEEEEECCCC-CEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEEC
Confidence 999853 24456677899999999998875 58999999999999999532 233444 356789999999
Q ss_pred CCCCeEEEEecCCcEEEEeCCCC--ceEEEecCCCCceeEEEECCC--CCEEEEEcCCCcEEEEeCCCCCCcC----cee
Q 019006 194 DASDKIYTGGIDNDVKVWDLRKG--EVSMTLQGHQDMITGMSLSPD--GSYLLTNGMDCKLCIWDMRPYAPQN----RCV 265 (347)
Q Consensus 194 ~~~~~l~~~~~dg~i~iwd~~~~--~~~~~~~~~~~~i~~v~~~~~--~~~l~t~~~d~~i~~wd~~~~~~~~----~~~ 265 (347)
|++.+|++++.|++|++||.+.+ ++...+.+|...|.+++|+|+ +.+|++++.|++|++||++...... .+.
T Consensus 163 p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~ 242 (330)
T 2hes_X 163 PSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCE 242 (330)
T ss_dssp SSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEE
T ss_pred CCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEe
Confidence 99999999999999999998766 567788999999999999998 6789999999999999986432111 122
Q ss_pred EEEeccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCCce--eeE-EecCCcc-CeeeEEEcC--CCCEEEEecCC
Q 019006 266 KILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRR--ILY-KLPGHTG-SVNESVFHA--TEPVIGSCSSD 339 (347)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~--~~~-~~~~h~~-~v~~~~~~~--~~~~l~s~s~D 339 (347)
..+.. .....+.+++|++++ +|++|+.||.|++||..+++ .+. .+.+|.. .|+.++|+| ++++|+|+|.|
T Consensus 243 ~~~~~---~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~D 318 (330)
T 2hes_X 243 AILPD---VHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDD 318 (330)
T ss_dssp EECCS---CCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETT
T ss_pred eeccc---ccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCC
Confidence 22222 124679999999765 89999999999999998763 333 3468887 899999999 68899999999
Q ss_pred CcEEeecC
Q 019006 340 KQIYLGEI 347 (347)
Q Consensus 340 ~~i~i~~~ 347 (347)
|+|+|||+
T Consensus 319 g~v~~W~~ 326 (330)
T 2hes_X 319 GIVNFWSL 326 (330)
T ss_dssp SEEEEEEC
T ss_pred CcEEEEEe
Confidence 99999985
No 15
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=5.4e-44 Score=312.31 Aligned_cols=287 Identities=26% Similarity=0.399 Sum_probs=241.9
Q ss_pred eeEecCccccEEEEEECCC-CCeEEEeeCCCcEEEEeccCCC----eeeEEEeCcccceeEEEEcCCCCEEEEecCCCeE
Q 019006 50 IMLLTGHQSAVYTMKFNPA-GTVIASGSHDRDIFLWHVHGDC----KNFMVLKGHKNAILDLHWTTDGSQIISASPDKTL 124 (347)
Q Consensus 50 ~~~~~~h~~~V~~v~~~~~-~~~l~s~~~d~~v~~w~~~~~~----~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i 124 (347)
..+|+||.+.|++|+|+|+ +++|||||.|++|++|++.... .....+.+|...|.+++|+|++++|++++.|+.|
T Consensus 31 ~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i 110 (340)
T 4aow_A 31 RGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTL 110 (340)
T ss_dssp EEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred EEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccc
Confidence 3468999999999999997 6899999999999999986432 2345688999999999999999999999999999
Q ss_pred EEEECCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceee--cCCCCceEEEEEcCCC--CeEE
Q 019006 125 RAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQT--FPDKYQITAVSFSDAS--DKIY 200 (347)
Q Consensus 125 ~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~--~~~~~~v~~~~~~~~~--~~l~ 200 (347)
++|+............+...+....+.+.+ .++++++.|+.+++||+........ ..+...+..++|++++ ..++
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 189 (340)
T 4aow_A 111 RLWDLTTGTTTRRFVGHTKDVLSVAFSSDN-RQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIV 189 (340)
T ss_dssp EEEETTTTEEEEEEECCSSCEEEEEECTTS-SCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEE
T ss_pred eEEeecccceeeeecCCCCceeEEEEeecC-ccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEE
Confidence 999999888777777777777666666654 5688999999999999876544332 2345678899998764 4678
Q ss_pred EEecCCcEEEEeCCCCceEEEecCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEeccccccccceE
Q 019006 201 TGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLL 280 (347)
Q Consensus 201 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (347)
+++.|+.|++||+++++....+.+|...|++++|+|++++|++++.|+.|++||++.. ..+..+..+ ..+.
T Consensus 190 s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~----~~~~~~~~~-----~~v~ 260 (340)
T 4aow_A 190 SCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEG----KHLYTLDGG-----DIIN 260 (340)
T ss_dssp EEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTT----EEEEEEECS-----SCEE
T ss_pred EEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccC----ceeeeecCC-----ceEE
Confidence 9999999999999999999999999999999999999999999999999999999743 344444432 4688
Q ss_pred EEEECCCCCEEEEeeCCCeEEEEeCCCceeeEEe---------cCCccCeeeEEEcCCCCEEEEecCCCcEEeecC
Q 019006 281 KCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKL---------PGHTGSVNESVFHATEPVIGSCSSDKQIYLGEI 347 (347)
Q Consensus 281 ~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~~~~---------~~h~~~v~~~~~~~~~~~l~s~s~D~~i~i~~~ 347 (347)
.+.|+|++.++ +++.|+.|++||+..+..+..+ .+|...|++++|+|++++|++++.||.|+|||+
T Consensus 261 ~~~~~~~~~~~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~ 335 (340)
T 4aow_A 261 ALCFSPNRYWL-CAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQV 335 (340)
T ss_dssp EEEECSSSSEE-EEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEE
T ss_pred eeecCCCCcee-eccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeC
Confidence 99999988665 5556899999999988776654 368899999999999999999999999999985
No 16
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=1.1e-44 Score=341.56 Aligned_cols=290 Identities=20% Similarity=0.277 Sum_probs=240.8
Q ss_pred CeeEecCccccEEEEEECCCCC-eEEEeeCCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEE
Q 019006 49 PIMLLTGHQSAVYTMKFNPAGT-VIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAW 127 (347)
Q Consensus 49 ~~~~~~~h~~~V~~v~~~~~~~-~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw 127 (347)
....+.+|...|++++|+|++. .|++|+.|++|++|+.. ..+....+.+|...|.+++|+|++++|++++.|++|++|
T Consensus 139 ~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~-~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lw 217 (611)
T 1nr0_A 139 SNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGP-PFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLY 217 (611)
T ss_dssp BCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETT-TBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred CcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECC-CCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEE
Confidence 3445789999999999999987 69999999999999975 345566789999999999999999999999999999999
Q ss_pred ECCCCceeeeee-------ccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeec-------------------
Q 019006 128 DVETGKQIKKMA-------EHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTF------------------- 181 (347)
Q Consensus 128 d~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~------------------- 181 (347)
|+.+++.+..+. .|...|..+++++++ .++++++.|++|++||+++++.+..+
T Consensus 218 d~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg-~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (611)
T 1nr0_A 218 NGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDG-TKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQA 296 (611)
T ss_dssp ETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSC
T ss_pred ECCCCcEeeeeccccccccccCCCEEEEEECCCC-CEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCE
Confidence 999988877763 688899999998875 58899999999999999876543322
Q ss_pred -------------------------CCCCceEEEEEcCCCCeEEEEecCCcEEEEeCCCCceEEEe-cC-----------
Q 019006 182 -------------------------PDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTL-QG----------- 224 (347)
Q Consensus 182 -------------------------~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~----------- 224 (347)
.|...|.+++|+|++++|++++.|+.|++||+.+++....+ .+
T Consensus 297 l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s 376 (611)
T 1nr0_A 297 LVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTT 376 (611)
T ss_dssp EEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEEC
T ss_pred EEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEEC
Confidence 24457999999999999999999999999998765432221 00
Q ss_pred ----------------------------------------------------------------------CCCceeEEEE
Q 019006 225 ----------------------------------------------------------------------HQDMITGMSL 234 (347)
Q Consensus 225 ----------------------------------------------------------------------~~~~i~~v~~ 234 (347)
|...+.+++|
T Consensus 377 ~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~ 456 (611)
T 1nr0_A 377 SKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVAL 456 (611)
T ss_dssp TTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEE
T ss_pred CCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEE
Confidence 1234678999
Q ss_pred CCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCC-ceeeEE
Q 019006 235 SPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTS-RRILYK 313 (347)
Q Consensus 235 ~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~-~~~~~~ 313 (347)
+|++++|++++.|++|++||+.... ...... .+| ...+.+++|+|||++|++++.|+.|++||+.+ ++++..
T Consensus 457 spdg~~lasgs~D~~v~lwd~~~~~--~~~~~~-~~h----~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~~~~~~ 529 (611)
T 1nr0_A 457 SNDKQFVAVGGQDSKVHVYKLSGAS--VSEVKT-IVH----PAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHT 529 (611)
T ss_dssp CTTSCEEEEEETTSEEEEEEEETTE--EEEEEE-EEC----SSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCC
T ss_pred eCCCCEEEEeCCCCeEEEEEccCCc--eeeeec-cCC----CCceEEEEECCCCCEEEEEcCCCCEEEEEcCCCCceeee
Confidence 9999999999999999999986421 111122 223 45799999999999999999999999999987 665543
Q ss_pred --ecCCccCeeeEEEcCCCCEEEEecCCCcEEeecC
Q 019006 314 --LPGHTGSVNESVFHATEPVIGSCSSDKQIYLGEI 347 (347)
Q Consensus 314 --~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~i~~~ 347 (347)
+.+|...|++++|+|++++|||+|.|++|++|++
T Consensus 530 ~~~~~H~~~V~~v~fspdg~~lasgs~D~~v~lW~~ 565 (611)
T 1nr0_A 530 NSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNM 565 (611)
T ss_dssp CCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred eeeeecccceeEEEECCCCCEEEEEECCCcEEEEEC
Confidence 4459999999999999999999999999999985
No 17
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=2.2e-44 Score=339.48 Aligned_cols=290 Identities=18% Similarity=0.261 Sum_probs=250.9
Q ss_pred CeeEecCccccEEEEEECCCCCeEEEeeCCCcEEEEeccC-CCeeeEEEeCcccceeEEEEcCCCCEEEEecCC----Ce
Q 019006 49 PIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHG-DCKNFMVLKGHKNAILDLHWTTDGSQIISASPD----KT 123 (347)
Q Consensus 49 ~~~~~~~h~~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~-~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d----g~ 123 (347)
....+.+|...|++++|+|+|++||+|+.|++|++||+.. .......+.+|...|.+++|+|++++|++++.+ +.
T Consensus 51 ~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~ 130 (611)
T 1nr0_A 51 DTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGH 130 (611)
T ss_dssp CCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEE
T ss_pred cCeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeE
Confidence 4567889999999999999999999999999999999853 333445678999999999999999999998865 46
Q ss_pred EEEEECCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeecC-CCCceEEEEEcCCCCeEEEE
Q 019006 124 LRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFP-DKYQITAVSFSDASDKIYTG 202 (347)
Q Consensus 124 i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~ 202 (347)
|++|| .++....+..|...|.++++++.+..++++|+.|++|++||....+....+. |...|.+++|+|++++|+++
T Consensus 131 v~~wd--~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~ 208 (611)
T 1nr0_A 131 VFLFD--TGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFAST 208 (611)
T ss_dssp EEETT--TCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred EEEee--CCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEE
Confidence 77777 4566677888999999999999877789999999999999998877766665 55689999999999999999
Q ss_pred ecCCcEEEEeCCCCceEEEec-------CCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEecccccc
Q 019006 203 GIDNDVKVWDLRKGEVSMTLQ-------GHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNF 275 (347)
Q Consensus 203 ~~dg~i~iwd~~~~~~~~~~~-------~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~ 275 (347)
+.|++|++||+.+++....+. +|.+.|.+++|+|++++|++++.|++|++||++. ..+...+..+. ..
T Consensus 209 s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~----~~~~~~~~~~~-~~ 283 (611)
T 1nr0_A 209 GGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVAT----LKVEKTIPVGT-RI 283 (611)
T ss_dssp ETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTT----TEEEEEEECCS-SG
T ss_pred ECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCC----CceeeeecCCC-Cc
Confidence 999999999999998887774 7999999999999999999999999999999874 34444444321 22
Q ss_pred ccceEEEEECCCCCEEEEeeCCCeEEEEeCCCceeeEEecCCccCeeeEEEcCCCCEEEEecCCCcEEeecC
Q 019006 276 EKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGEI 347 (347)
Q Consensus 276 ~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~i~~~ 347 (347)
......+.| +++.|++++.||.+++||...++....+.+|...|.+++|+|++++|++++.|++|++||+
T Consensus 284 ~~~~~~~~~--~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~ 353 (611)
T 1nr0_A 284 EDQQLGIIW--TKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDI 353 (611)
T ss_dssp GGCEEEEEE--CSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred cceeEEEEE--cCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEEC
Confidence 344566666 6889999999999999999999888889999999999999999999999999999999985
No 18
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=9.7e-44 Score=332.77 Aligned_cols=281 Identities=32% Similarity=0.598 Sum_probs=250.5
Q ss_pred eeEecCccccEEEEEECCCCCeEEEeeCCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEEC
Q 019006 50 IMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDV 129 (347)
Q Consensus 50 ~~~~~~h~~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~ 129 (347)
...+.+|...|.+++|+|+++.|++++.|+.|++|+..+ .....+.+|...|.+++|+|++++|++++.||.+++||.
T Consensus 296 ~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~--~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~ 373 (577)
T 2ymu_A 296 LQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNG--QHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR 373 (577)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTS--CEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred EEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCC--CeeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcC
Confidence 456789999999999999999999999999999999854 345677899999999999999999999999999999995
Q ss_pred CCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeec-CCCCceEEEEEcCCCCeEEEEecCCcE
Q 019006 130 ETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTF-PDKYQITAVSFSDASDKIYTGGIDNDV 208 (347)
Q Consensus 130 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i 208 (347)
+++.+..+..|...+..+++++++ .++++++.|+.|++||.. ++.+..+ .+...+.+++|+|+++++++++.|+.|
T Consensus 374 -~~~~~~~~~~~~~~v~~~~~s~dg-~~l~~~~~d~~v~~~~~~-~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v 450 (577)
T 2ymu_A 374 -NGQLLQTLTGHSSSVRGVAFSPDG-QTIASASDDKTVKLWNRN-GQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTV 450 (577)
T ss_dssp -TCCEEEEEECCSSCEEEEEECTTS-SCEEEEETTSEEEEECTT-CCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred -CCCEEEEecCCCCCeEEEEECCCC-CEEEEEeCCCEEEEEeCC-CCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEE
Confidence 567778888899999999998876 468899999999999964 4444444 456789999999999999999999999
Q ss_pred EEEeCCCCceEEEecCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCC
Q 019006 209 KVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDG 288 (347)
Q Consensus 209 ~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g 288 (347)
++||. +++....+.+|...|++++|+|++++|++++.|+.|++||.. .+++..+.+|. ..|.+++|+|+|
T Consensus 451 ~~w~~-~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~-----~~~~~~~~~h~----~~v~~l~~s~dg 520 (577)
T 2ymu_A 451 KLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN-----GQLLQTLTGHS----SSVRGVAFSPDG 520 (577)
T ss_dssp EEEET-TSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEETT-----SCEEEEEECCS----SCEEEEEECTTS
T ss_pred EEEEC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCC-----CCEEEEEeCCC----CCEEEEEEcCCC
Confidence 99996 567788889999999999999999999999999999999953 35666777764 578999999999
Q ss_pred CEEEEeeCCCeEEEEeCCCceeeEEecCCccCeeeEEEcCCCCEEEEecCCCcEEeec
Q 019006 289 SKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGE 346 (347)
Q Consensus 289 ~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~i~~ 346 (347)
++|++|+.||.|++||. +++++..+.+|.+.|++++|+|++++|+|+|.|++|++||
T Consensus 521 ~~l~s~~~dg~v~lwd~-~~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 521 QTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp SCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CEEEEEECcCEEEEEeC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 99999999999999995 6788899999999999999999999999999999999997
No 19
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.6e-43 Score=307.97 Aligned_cols=285 Identities=20% Similarity=0.308 Sum_probs=251.0
Q ss_pred eEecCccccEEEEEECCCCCeEEEeeCCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEECC
Q 019006 51 MLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVE 130 (347)
Q Consensus 51 ~~~~~h~~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~ 130 (347)
..+.+|.+.|++++|+|++++|++|+.||.|++|++.. ......+.+|...|.+++|+|++++|++++.||.|++||+.
T Consensus 26 ~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~-~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~ 104 (369)
T 3zwl_B 26 IKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLN-GERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVS 104 (369)
T ss_dssp EEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTT-CCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETT
T ss_pred EEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCC-chhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC
Confidence 56889999999999999999999999999999999864 45667788999999999999999999999999999999999
Q ss_pred CCceeeeeeccCcceeEeecCCCCCCEEEEEcCC-----CceEEEeCCCCCcee-----------ec-CCCC--ceEEEE
Q 019006 131 TGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDD-----GTAKLWDMRQRGAIQ-----------TF-PDKY--QITAVS 191 (347)
Q Consensus 131 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d-----~~i~iwd~~~~~~~~-----------~~-~~~~--~v~~~~ 191 (347)
+++.+..+. +...+..+.+.+.+ .++++++.+ +.|++||+....... .+ .+.. .+.+++
T Consensus 105 ~~~~~~~~~-~~~~v~~~~~~~~~-~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (369)
T 3zwl_B 105 NGQCVATWK-SPVPVKRVEFSPCG-NYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAG 182 (369)
T ss_dssp TCCEEEEEE-CSSCEEEEEECTTS-SEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEE
T ss_pred CCcEEEEee-cCCCeEEEEEccCC-CEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEE
Confidence 998887776 77788888888875 577888888 999999987554211 11 1222 799999
Q ss_pred EcCCCCeEEEEecCCcEEEEeCCC-CceEEEecCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEec
Q 019006 192 FSDASDKIYTGGIDNDVKVWDLRK-GEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEG 270 (347)
Q Consensus 192 ~~~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~ 270 (347)
|+|+++.+++++.||.|++||+++ .+....+..|...|.+++|+|++++|++++.|+.|++||++.. .....+.
T Consensus 183 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~----~~~~~~~- 257 (369)
T 3zwl_B 183 WSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTL----QVLKKYE- 257 (369)
T ss_dssp ECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC----CEEEEEE-
T ss_pred EcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCC----ceeeeec-
Confidence 999999999999999999999998 6788888899999999999999999999999999999999753 3344443
Q ss_pred cccccccceEEEEECCCCCEEEEeeCCC--------------eEEEEeCCCceeeEEecCCccCeeeEEEcCCCCEEEEe
Q 019006 271 HQHNFEKNLLKCGWSPDGSKVTAGSSDR--------------MVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSC 336 (347)
Q Consensus 271 ~~~~~~~~~~~~~~s~~g~~l~sgs~dg--------------~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~ 336 (347)
....+..++|+|+++++++++.++ .+++||..+++.+..+.+|...|.+++|+|++++|+++
T Consensus 258 ----~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~ 333 (369)
T 3zwl_B 258 ----TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASG 333 (369)
T ss_dssp ----CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEE
T ss_pred ----CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEEE
Confidence 135688999999999999999988 89999999999999999999999999999999999999
Q ss_pred cCCCcEEeecC
Q 019006 337 SSDKQIYLGEI 347 (347)
Q Consensus 337 s~D~~i~i~~~ 347 (347)
+.||.|++|++
T Consensus 334 ~~dg~v~iw~~ 344 (369)
T 3zwl_B 334 GEDGFIRLHHF 344 (369)
T ss_dssp ETTSEEEEEEE
T ss_pred cCCCeEEEEEC
Confidence 99999999985
No 20
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=3.3e-43 Score=336.24 Aligned_cols=286 Identities=26% Similarity=0.374 Sum_probs=244.9
Q ss_pred eEecCccccEEEEEECCCC-CeEEEeeCCCcEEEEeccCCC----eeeEEEeCcccceeEEEEcCCCCEEEEecCCCeEE
Q 019006 51 MLLTGHQSAVYTMKFNPAG-TVIASGSHDRDIFLWHVHGDC----KNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLR 125 (347)
Q Consensus 51 ~~~~~h~~~V~~v~~~~~~-~~l~s~~~d~~v~~w~~~~~~----~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~ 125 (347)
..+.+|.+.|++|+|+|++ .+|+||+.|++|++|++.... .....+.+|...|.+++|+|++++|++|+.||+|+
T Consensus 376 ~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~ 455 (694)
T 3dm0_A 376 GTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELR 455 (694)
T ss_dssp EEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred hhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEE
Confidence 4688999999999999875 799999999999999986432 23456889999999999999999999999999999
Q ss_pred EEECCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeec----CCCCceEEEEEcCCC--CeE
Q 019006 126 AWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTF----PDKYQITAVSFSDAS--DKI 199 (347)
Q Consensus 126 iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~----~~~~~v~~~~~~~~~--~~l 199 (347)
+||+.+++....+..|...|.++++++++ .++++|+.|++|++||.......... .+...|.+++|+|++ ..+
T Consensus 456 vwd~~~~~~~~~~~~h~~~v~~~~~s~~~-~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l 534 (694)
T 3dm0_A 456 LWDLAAGVSTRRFVGHTKDVLSVAFSLDN-RQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTI 534 (694)
T ss_dssp EEETTTTEEEEEEECCSSCEEEEEECTTS-SCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEE
T ss_pred EEECCCCcceeEEeCCCCCEEEEEEeCCC-CEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceE
Confidence 99999999999999999999999998876 46889999999999998655433222 345679999999986 579
Q ss_pred EEEecCCcEEEEeCCCCceEEEecCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEeccccccccce
Q 019006 200 YTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNL 279 (347)
Q Consensus 200 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (347)
++++.|+.|++||+++++....+.+|...|++++|+|++++|++++.|+.|++||++.. +.+..+.. ...+
T Consensus 535 ~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~----~~~~~~~~-----~~~v 605 (694)
T 3dm0_A 535 VSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEG----KKLYSLEA-----NSVI 605 (694)
T ss_dssp EEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTT----EEEECCBC-----SSCE
T ss_pred EEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCC----ceEEEecC-----CCcE
Confidence 99999999999999999999999999999999999999999999999999999999743 33333322 3468
Q ss_pred EEEEECCCCCEEEEeeCCCeEEEEeCCCceeeEEecCCcc-------------------CeeeEEEcCCCCEEEEecCCC
Q 019006 280 LKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTG-------------------SVNESVFHATEPVIGSCSSDK 340 (347)
Q Consensus 280 ~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~-------------------~v~~~~~~~~~~~l~s~s~D~ 340 (347)
.+++|+|++.+|++++. +.|++||+.+++++..+..|.. .+.+++|+|++++|+|++.||
T Consensus 606 ~~~~~sp~~~~l~~~~~-~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg 684 (694)
T 3dm0_A 606 HALCFSPNRYWLCAATE-HGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDG 684 (694)
T ss_dssp EEEEECSSSSEEEEEET-TEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTS
T ss_pred EEEEEcCCCcEEEEEcC-CCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCC
Confidence 89999999998888765 5699999999998877654321 368899999999999999999
Q ss_pred cEEeecC
Q 019006 341 QIYLGEI 347 (347)
Q Consensus 341 ~i~i~~~ 347 (347)
+|+||++
T Consensus 685 ~i~iW~i 691 (694)
T 3dm0_A 685 VIRVWGI 691 (694)
T ss_dssp EEEEEEC
T ss_pred eEEEEec
Confidence 9999986
No 21
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=2.5e-43 Score=314.79 Aligned_cols=290 Identities=13% Similarity=0.137 Sum_probs=249.6
Q ss_pred eeEecCccccEEEEEECCCCCeEEEeeCCCcEEEEeccCCC-----eeeEEEeCcccceeEEEEcCC----C---CEEEE
Q 019006 50 IMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDC-----KNFMVLKGHKNAILDLHWTTD----G---SQIIS 117 (347)
Q Consensus 50 ~~~~~~h~~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~-----~~~~~~~~h~~~v~~~~~~~~----~---~~l~s 117 (347)
...+.+|.+.|++++|+| ++|++|+.||.|++|++.... .....+.+|...|.+++|+|+ + ++|++
T Consensus 9 ~~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s 86 (397)
T 1sq9_A 9 ANAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVAT 86 (397)
T ss_dssp EEESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEE
T ss_pred hhhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEE
Confidence 356789999999999998 899999999999999997543 246678899999999999999 9 99999
Q ss_pred ecCCCeEEEEECCCCce-----eeeeecc-----CcceeEeecC----CCCCCE-EEEEcCCCceEEEeCCC------CC
Q 019006 118 ASPDKTLRAWDVETGKQ-----IKKMAEH-----NSFVNSCCPS----RRGPPL-VVSGSDDGTAKLWDMRQ------RG 176 (347)
Q Consensus 118 ~~~dg~i~iwd~~~~~~-----~~~~~~~-----~~~v~~~~~~----~~~~~~-~~s~~~d~~i~iwd~~~------~~ 176 (347)
++.||.|++||+.+++. ...+..| ...+..+.+. +.+ .+ +++++.|+.|++||++. ..
T Consensus 87 ~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 165 (397)
T 1sq9_A 87 TSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLL-SHRLVATDVKGTTYIWKFHPFADESNSL 165 (397)
T ss_dssp EETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC-----CEEEEEEETTSCEEEEEEESSSSHHHHT
T ss_pred EcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCC-ceEEEEEeCCCcEEEEeCCccccccccc
Confidence 99999999999988876 7777777 4788888888 655 56 89999999999999987 55
Q ss_pred cee-----ec--------CCCCceEEEEEcCCCCeEEEEecCCcEEEEeCCCCceEEEecC---C---CCceeEEEECCC
Q 019006 177 AIQ-----TF--------PDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQG---H---QDMITGMSLSPD 237 (347)
Q Consensus 177 ~~~-----~~--------~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~---~---~~~i~~v~~~~~ 237 (347)
.+. .+ .+...+.+++|+|++ .+++++.||.|++||+++++....+.. | ...|.+++|+|+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~ 244 (397)
T 1sq9_A 166 TLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQ 244 (397)
T ss_dssp TTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSS
T ss_pred eeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCC
Confidence 544 43 245679999999999 999999999999999999999999988 8 899999999999
Q ss_pred CCEEEEEcCC---CcEEEEeCCCCCCcCceeEEEeccc---------cccccceEEEEECCCCCEEEEeeCCCeEEEEeC
Q 019006 238 GSYLLTNGMD---CKLCIWDMRPYAPQNRCVKILEGHQ---------HNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDT 305 (347)
Q Consensus 238 ~~~l~t~~~d---~~i~~wd~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~ 305 (347)
+++|++++.| +.|++||++.. ..+..+.... ......+.+++|+|++++|++|+.||.|++||+
T Consensus 245 ~~~l~~~~~d~~~g~i~i~d~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~ 320 (397)
T 1sq9_A 245 GSLLAIAHDSNSFGCITLYETEFG----ERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDV 320 (397)
T ss_dssp TTEEEEEEEETTEEEEEEEETTTC----CEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEET
T ss_pred CCEEEEEecCCCCceEEEEECCCC----cccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEc
Confidence 9999999999 99999999753 3445554400 002457999999999999999999999999999
Q ss_pred CCceeeEEec------CC---------------ccCeeeEEEcCCC----------CEEEEecCCCcEEeecC
Q 019006 306 TSRRILYKLP------GH---------------TGSVNESVFHATE----------PVIGSCSSDKQIYLGEI 347 (347)
Q Consensus 306 ~~~~~~~~~~------~h---------------~~~v~~~~~~~~~----------~~l~s~s~D~~i~i~~~ 347 (347)
.+++.+..+. +| ...|..++|+|++ ++|++++.||.|++|++
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~ 393 (397)
T 1sq9_A 321 KTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFRE 393 (397)
T ss_dssp TTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEE
T ss_pred CCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEc
Confidence 9999999999 88 9999999999998 79999999999999985
No 22
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.6e-42 Score=299.04 Aligned_cols=247 Identities=19% Similarity=0.358 Sum_probs=218.0
Q ss_pred eEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEECCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeC
Q 019006 93 FMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDM 172 (347)
Q Consensus 93 ~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~ 172 (347)
...+.+|.+.|.+++|+|++.+|++++.||+|++||+.+++.+..+..|...+..+.+.+.+ .++++|+.|++|++||+
T Consensus 6 ~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~s~d~~i~vwd~ 84 (304)
T 2ynn_A 6 KKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARK-NWIIVGSDDFRIRVFNY 84 (304)
T ss_dssp EEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGG-TEEEEEETTSEEEEEET
T ss_pred EEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCC-CEEEEECCCCEEEEEEC
Confidence 45688999999999999999999999999999999999999999999899999988887765 58899999999999999
Q ss_pred CCCCceeecC-CCCceEEEEEcCCCCeEEEEecCCcEEEEeCCCC-ceEEEecCCCCceeEEEECC-CCCEEEEEcCCCc
Q 019006 173 RQRGAIQTFP-DKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKG-EVSMTLQGHQDMITGMSLSP-DGSYLLTNGMDCK 249 (347)
Q Consensus 173 ~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~i~~v~~~~-~~~~l~t~~~d~~ 249 (347)
.++..+..+. +...|.+++|+|+++++++|+.|++|++||++++ .....+.+|...|.+++|+| ++.+|++++.|++
T Consensus 85 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~ 164 (304)
T 2ynn_A 85 NTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRT 164 (304)
T ss_dssp TTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSE
T ss_pred CCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCe
Confidence 9988877764 5678999999999999999999999999999877 45567889999999999999 6789999999999
Q ss_pred EEEEeCCCCCCcCceeEEEeccccccccceEEEEECC--CCCEEEEeeCCCeEEEEeCCCceeeEEecCCccCeeeEEEc
Q 019006 250 LCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSP--DGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFH 327 (347)
Q Consensus 250 i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~--~g~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~ 327 (347)
|++||++...+ ...+..+. ...+..+.|+| ++.+|++|+.|+.|++||+.+++++..+.+|...|..++|+
T Consensus 165 v~iwd~~~~~~----~~~~~~~~---~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~ 237 (304)
T 2ynn_A 165 VKVWSLGQSTP----NFTLTTGQ---ERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFH 237 (304)
T ss_dssp EEEEETTCSSC----SEEEECCC---TTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEC
T ss_pred EEEEECCCCCc----cceeccCC---cCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEEC
Confidence 99999975332 12222211 24567777876 78899999999999999999999999999999999999999
Q ss_pred CCCCEEEEecCCCcEEeecC
Q 019006 328 ATEPVIGSCSSDKQIYLGEI 347 (347)
Q Consensus 328 ~~~~~l~s~s~D~~i~i~~~ 347 (347)
|++++|+|++.||+|++||+
T Consensus 238 p~~~~l~s~s~Dg~i~iWd~ 257 (304)
T 2ynn_A 238 PTLPIIISGSEDGTLKIWNS 257 (304)
T ss_dssp SSSSEEEEEETTSCEEEEET
T ss_pred CCCCEEEEEcCCCeEEEEEC
Confidence 99999999999999999985
No 23
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1e-41 Score=319.08 Aligned_cols=283 Identities=31% Similarity=0.561 Sum_probs=249.6
Q ss_pred CeeEecCccccEEEEEECCCCCeEEEeeCCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEE
Q 019006 49 PIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWD 128 (347)
Q Consensus 49 ~~~~~~~h~~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd 128 (347)
.+..+.+|...|.+++|+|+++.|++++.|+.|++|+..+ .....+.+|...|.+++|+|++++|++++.|+.|++||
T Consensus 254 ~~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~~--~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~ 331 (577)
T 2ymu_A 254 LLQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRNG--QLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWN 331 (577)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTS--CEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred EEEEEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCCC--cEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEe
Confidence 3456789999999999999999999999999999999754 44567889999999999999999999999999999999
Q ss_pred CCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeec-CCCCceEEEEEcCCCCeEEEEecCCc
Q 019006 129 VETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTF-PDKYQITAVSFSDASDKIYTGGIDND 207 (347)
Q Consensus 129 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~ 207 (347)
... ..+..+..|...+..+++++++ .++++++.|+.+++||.. ++.+..+ .+...|.+++|+|+++++++++.|+.
T Consensus 332 ~~~-~~~~~~~~~~~~v~~~~~s~~g-~~l~~~~~dg~v~~~~~~-~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~ 408 (577)
T 2ymu_A 332 RNG-QHLQTLTGHSSSVWGVAFSPDG-QTIASASDDKTVKLWNRN-GQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKT 408 (577)
T ss_dssp TTS-CEEEEECCCSSCEEEEEECTTS-SEEEEEETTSEEEEEETT-CCEEEEEECCSSCEEEEEECTTSSCEEEEETTSE
T ss_pred CCC-CeeEEEeCCCCCEEEEEECCCC-CEEEEEeCCCEEEEEcCC-CCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCE
Confidence 764 4566777888889888888765 578999999999999964 4444444 45678999999999999999999999
Q ss_pred EEEEeCCCCceEEEecCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCC
Q 019006 208 VKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPD 287 (347)
Q Consensus 208 i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 287 (347)
|++||. +++....+.+|...|++++|+|++++|++++.|+.|++||.. ...+..+.+|. ..+.+++|+|+
T Consensus 409 v~~~~~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~-----~~~~~~~~~~~----~~v~~~~~spd 478 (577)
T 2ymu_A 409 VKLWNR-NGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRN-----GQLLQTLTGHS----SSVRGVAFSPD 478 (577)
T ss_dssp EEEECT-TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETT-----SCEEEEEECCS----SCEEEEEECTT
T ss_pred EEEEeC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECC-----CCEEEEEcCCC----CCEEEEEEcCC
Confidence 999995 567788889999999999999999999999999999999964 24455666653 57899999999
Q ss_pred CCEEEEeeCCCeEEEEeCCCceeeEEecCCccCeeeEEEcCCCCEEEEecCCCcEEeecC
Q 019006 288 GSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGEI 347 (347)
Q Consensus 288 g~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~i~~~ 347 (347)
+++|++++.|+.|++||. +++++..+.+|...|++++|+|++++|++++.|+.|++||+
T Consensus 479 ~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~ 537 (577)
T 2ymu_A 479 GQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR 537 (577)
T ss_dssp SCEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT
T ss_pred CCEEEEEeCCCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeC
Confidence 999999999999999995 67888899999999999999999999999999999999984
No 24
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=3.9e-43 Score=309.68 Aligned_cols=290 Identities=17% Similarity=0.323 Sum_probs=242.3
Q ss_pred eEecCccccEEEEEECCC----CCeEEEeeCCCcEEEEeccCCCeeeEEEeC-----cccceeEEEEcCC----CCEEEE
Q 019006 51 MLLTGHQSAVYTMKFNPA----GTVIASGSHDRDIFLWHVHGDCKNFMVLKG-----HKNAILDLHWTTD----GSQIIS 117 (347)
Q Consensus 51 ~~~~~h~~~V~~v~~~~~----~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~-----h~~~v~~~~~~~~----~~~l~s 117 (347)
....+|.+.|++++|+|+ ...+++++.++.|++|++... .....+.. |...|.+++|+|+ +.+|++
T Consensus 12 ~~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~ 90 (366)
T 3k26_A 12 SLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQ-GEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAV 90 (366)
T ss_dssp EEECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGG-GCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEE
T ss_pred EeecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCC-cEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEE
Confidence 456799999999999984 456777777779999998632 22333332 5678999999998 669999
Q ss_pred ecCCCeEEEEECCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeec----CCCCceEEEEEc
Q 019006 118 ASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTF----PDKYQITAVSFS 193 (347)
Q Consensus 118 ~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~----~~~~~v~~~~~~ 193 (347)
++.||.|++||+.+++.+..+..|...+..+++++.+..++++++.|+.|++||+++++.+..+ .+...+.+++|+
T Consensus 91 ~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~ 170 (366)
T 3k26_A 91 AGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYD 170 (366)
T ss_dssp EETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEEC
T ss_pred ecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEEC
Confidence 9999999999999999999998899999999999856679999999999999999988877776 466789999999
Q ss_pred CCCCeEEEEecCCcEEEEeCCCCceEEEe----------------------------cCCCCceeEEEECCCCCEEEEEc
Q 019006 194 DASDKIYTGGIDNDVKVWDLRKGEVSMTL----------------------------QGHQDMITGMSLSPDGSYLLTNG 245 (347)
Q Consensus 194 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~----------------------------~~~~~~i~~v~~~~~~~~l~t~~ 245 (347)
|++..+++++.||.|++||+++++....+ ..|...|.+++|+ ++++++++
T Consensus 171 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~ 248 (366)
T 3k26_A 171 LLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKS 248 (366)
T ss_dssp TTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEEC
T ss_pred CCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEEe
Confidence 99999999999999999999876543332 2388999999998 78999999
Q ss_pred CCCcEEEEeCCCCCCc----------CceeEEEeccccccccceEEEEECCC--CCEEEEeeCCCeEEEEeCCCcee---
Q 019006 246 MDCKLCIWDMRPYAPQ----------NRCVKILEGHQHNFEKNLLKCGWSPD--GSKVTAGSSDRMVYIWDTTSRRI--- 310 (347)
Q Consensus 246 ~d~~i~~wd~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~s~~--g~~l~sgs~dg~i~vwd~~~~~~--- 310 (347)
.|+.|++||++..... ...+..+..|. ..+.+++|+|+ +++|++|+.||.|++||+.+++.
T Consensus 249 ~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~ 324 (366)
T 3k26_A 249 CENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQ----CDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKA 324 (366)
T ss_dssp SSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSS----CCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGC
T ss_pred cCCEEEEEeCCCccccccccccCCcchheeccccccC----CcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccc
Confidence 9999999998754321 12234444442 45778889999 99999999999999999998764
Q ss_pred -eEEecCC--ccCeeeEEEcCCCCEEEEecCCCcEEeecC
Q 019006 311 -LYKLPGH--TGSVNESVFHATEPVIGSCSSDKQIYLGEI 347 (347)
Q Consensus 311 -~~~~~~h--~~~v~~~~~~~~~~~l~s~s~D~~i~i~~~ 347 (347)
...+.+| ...|.+++|+|++++|++++.||.|++||+
T Consensus 325 ~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~ 364 (366)
T 3k26_A 325 KCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDR 364 (366)
T ss_dssp EEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC
T ss_pred cceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEe
Confidence 3477888 799999999999999999999999999986
No 25
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.8e-43 Score=315.91 Aligned_cols=292 Identities=12% Similarity=0.212 Sum_probs=235.8
Q ss_pred CeeEe-cCccccEEEEEECC-CCCeEEEeeCCCcEEEEeccC---CC--eeeEEEeCcccceeEEEEcCCCCEEEEecCC
Q 019006 49 PIMLL-TGHQSAVYTMKFNP-AGTVIASGSHDRDIFLWHVHG---DC--KNFMVLKGHKNAILDLHWTTDGSQIISASPD 121 (347)
Q Consensus 49 ~~~~~-~~h~~~V~~v~~~~-~~~~l~s~~~d~~v~~w~~~~---~~--~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d 121 (347)
.+..+ .+|.+.|++++|+| ++++||+|+.||+|++|++.. .. .....+ +|...|.+++|+|++++|++++.|
T Consensus 54 ~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~s~d 132 (437)
T 3gre_A 54 LIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCSSTVTQITMIPNFDAFAVSSKD 132 (437)
T ss_dssp EEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-ECSSCEEEEEECTTSSEEEEEETT
T ss_pred EEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec-cCCCCEEEEEEeCCCCEEEEEeCC
Confidence 44566 89999999999999 999999999999999999853 21 112222 589999999999999999999999
Q ss_pred CeEEEEECC---CCceeeeeecc------------CcceeEeec-CCCCCCEEEEEcCCCceEEEeCCCCCceeecC---
Q 019006 122 KTLRAWDVE---TGKQIKKMAEH------------NSFVNSCCP-SRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFP--- 182 (347)
Q Consensus 122 g~i~iwd~~---~~~~~~~~~~~------------~~~v~~~~~-~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~--- 182 (347)
|.|++||+. +++....+..+ ...+..+.+ ...+..++++|+.|+.|++||+++++.+..+.
T Consensus 133 g~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~ 212 (437)
T 3gre_A 133 GQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSP 212 (437)
T ss_dssp SEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCG
T ss_pred CEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCC
Confidence 999999994 55544433322 222322221 11234689999999999999999988887775
Q ss_pred CCCceEEEEEcCCCCeEEEEecCCcEEEEeCCCCceEEEec-CCCCceeEEEEC----CCCCEEEEEcCCCcEEEEeCCC
Q 019006 183 DKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQ-GHQDMITGMSLS----PDGSYLLTNGMDCKLCIWDMRP 257 (347)
Q Consensus 183 ~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~~i~~v~~~----~~~~~l~t~~~d~~i~~wd~~~ 257 (347)
+...|.+++|+|++.++++|+.||.|++||+++++....+. .|...|.+++|+ |++.+|++++.|+.|++||++.
T Consensus 213 h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 292 (437)
T 3gre_A 213 RHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVK 292 (437)
T ss_dssp GGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTT
T ss_pred CCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCC
Confidence 45789999999999999999999999999999998888875 677789999665 4677999999999999999974
Q ss_pred CCCcCceeEEEecccc----------------------ccccceEEEEECCCCCEEEEeeCCCeEEEEeCCCceeeEEec
Q 019006 258 YAPQNRCVKILEGHQH----------------------NFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLP 315 (347)
Q Consensus 258 ~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~~~~~ 315 (347)
..+...+.++.. .....+.+++|+ ++++|++|+.||.|++||+.+++.+..+.
T Consensus 293 ----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~ 367 (437)
T 3gre_A 293 ----GHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNELSSSKAVI 367 (437)
T ss_dssp ----TEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGGGCEEEE
T ss_pred ----CcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCcccceEEe
Confidence 334444544321 133458888999 78999999999999999999998877776
Q ss_pred C-------------------------------------CccCeeeEEEcCC--CCEEEEecCCCcEEeec
Q 019006 316 G-------------------------------------HTGSVNESVFHAT--EPVIGSCSSDKQIYLGE 346 (347)
Q Consensus 316 ~-------------------------------------h~~~v~~~~~~~~--~~~l~s~s~D~~i~i~~ 346 (347)
+ |...|++++|+++ +.+|+|++.||.|+||.
T Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 368 SPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp CC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred cccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 6 8899999999998 78999999999999995
No 26
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=4.2e-42 Score=305.78 Aligned_cols=287 Identities=20% Similarity=0.299 Sum_probs=234.0
Q ss_pred CeeEecCccccEEEEEECCCC-CeEEEeeCCCcEEEEeccCCCeeeEEE--eCcccceeEEEEcC-CCCEEEEecCCCeE
Q 019006 49 PIMLLTGHQSAVYTMKFNPAG-TVIASGSHDRDIFLWHVHGDCKNFMVL--KGHKNAILDLHWTT-DGSQIISASPDKTL 124 (347)
Q Consensus 49 ~~~~~~~h~~~V~~v~~~~~~-~~l~s~~~d~~v~~w~~~~~~~~~~~~--~~h~~~v~~~~~~~-~~~~l~s~~~dg~i 124 (347)
....+.+|...|++++|+|++ ++||+|+.||.|++|++.... ....+ .+|...|.+++|+| ++.+|++++.|+.|
T Consensus 65 ~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i 143 (383)
T 3ei3_B 65 LHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQN-KTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGAT 143 (383)
T ss_dssp EEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTT-CEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEE
T ss_pred eEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcc-cceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEE
Confidence 345778999999999999999 999999999999999996432 22333 47999999999999 77999999999999
Q ss_pred EEEECCCCceeeeeecc---CcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeec-CCCCceEEEEEcCCCC-eE
Q 019006 125 RAWDVETGKQIKKMAEH---NSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTF-PDKYQITAVSFSDASD-KI 199 (347)
Q Consensus 125 ~iwd~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~-~l 199 (347)
++||+.+ ..+..+..+ ...+..+++++.+ .++++|+.|+.|++||++ +..+..+ .+...|.+++|+|+++ .+
T Consensus 144 ~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~i~d~~-~~~~~~~~~h~~~v~~~~~~~~~~~~l 220 (383)
T 3ei3_B 144 TLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSR-QMLATGDSTGRLLLLGLD-GHEIFKEKLHKAKVTHAEFNPRCDWLM 220 (383)
T ss_dssp EEEETTS-CEEEEEECCCCSSCCEEEEEEETTT-TEEEEEETTSEEEEEETT-SCEEEEEECSSSCEEEEEECSSCTTEE
T ss_pred EEEECCC-CceEEEeccCCCCCCeEEEEECCCC-CEEEEECCCCCEEEEECC-CCEEEEeccCCCcEEEEEECCCCCCEE
Confidence 9999986 444555443 3668888888765 588999999999999995 4455444 4667899999999999 89
Q ss_pred EEEecCCcEEEEeCCC----CceEEEecCCCCceeEEEECC-CCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEeccccc
Q 019006 200 YTGGIDNDVKVWDLRK----GEVSMTLQGHQDMITGMSLSP-DGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHN 274 (347)
Q Consensus 200 ~~~~~dg~i~iwd~~~----~~~~~~~~~~~~~i~~v~~~~-~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~ 274 (347)
++++.|+.|++||+++ +.....+ +|...|.+++|+| ++++|++++.|+.|++||++...... .+..|...
T Consensus 221 ~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~----~~~~~~~~ 295 (383)
T 3ei3_B 221 ATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPD----QIIIHPHR 295 (383)
T ss_dssp EEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCS----EEEECCBC
T ss_pred EEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCcccc----cccccccc
Confidence 9999999999999987 5555555 6889999999999 99999999999999999998654322 22222110
Q ss_pred -------------cccceEEEEECCCCCEEEEeeCCCeEEEEeCCCceeeEEecC--CccCeeeEEEcCCCCEEEEecCC
Q 019006 275 -------------FEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPG--HTGSVNESVFHATEPVIGSCSSD 339 (347)
Q Consensus 275 -------------~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~~~~~~--h~~~v~~~~~~~~~~~l~s~s~D 339 (347)
....+..++|+|+|++ +|+.||.|++||+.+++++..+.+ |.+.+..++|+|++++|++++ |
T Consensus 296 ~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s-d 372 (383)
T 3ei3_B 296 QFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASGM-G 372 (383)
T ss_dssp CCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEEE-T
T ss_pred ccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEec-C
Confidence 0124455677777777 888999999999999999999987 456778889999999999997 9
Q ss_pred CcEEeecC
Q 019006 340 KQIYLGEI 347 (347)
Q Consensus 340 ~~i~i~~~ 347 (347)
+.|++||+
T Consensus 373 ~~i~iw~~ 380 (383)
T 3ei3_B 373 FNILIWNR 380 (383)
T ss_dssp TEEEEEEC
T ss_pred CcEEEEec
Confidence 99999986
No 27
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=2.6e-42 Score=312.49 Aligned_cols=291 Identities=21% Similarity=0.321 Sum_probs=224.4
Q ss_pred eEecCccccEEEEEECC-CCCeEEEeeCCCcEEEEeccCCC-eeeEEEeCcccceeEEEEcC-CCCEEEEecCCCeEEEE
Q 019006 51 MLLTGHQSAVYTMKFNP-AGTVIASGSHDRDIFLWHVHGDC-KNFMVLKGHKNAILDLHWTT-DGSQIISASPDKTLRAW 127 (347)
Q Consensus 51 ~~~~~h~~~V~~v~~~~-~~~~l~s~~~d~~v~~w~~~~~~-~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~dg~i~iw 127 (347)
....+|...|++|+|+| ++.+||+|+.||+|+|||+.... .....+.+|.+.|++|+|+| ++.+|++|+.||+|++|
T Consensus 113 ~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iw 192 (435)
T 4e54_B 113 QKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQ 192 (435)
T ss_dssp CEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEE
T ss_pred ccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEe
Confidence 45667899999999999 56799999999999999986432 33445678999999999998 68899999999999999
Q ss_pred ECCCCceeeeeecc--CcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeecCCCCceEEEEEcCCCC-eEEEEec
Q 019006 128 DVETGKQIKKMAEH--NSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASD-KIYTGGI 204 (347)
Q Consensus 128 d~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~ 204 (347)
|++++........+ ...+.++.+++++ .++++|+.||.|++||++.........+...|.+++|+|++. .+++++.
T Consensus 193 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~g~~dg~i~~wd~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~ 271 (435)
T 4e54_B 193 DFKGNILRVFASSDTINIWFCSLDVSASS-RMVVTGDNVGNVILLNMDGKELWNLRMHKKKVTHVALNPCCDWFLATASV 271 (435)
T ss_dssp ETTSCEEEEEECCSSCSCCCCCEEEETTT-TEEEEECSSSBEEEEESSSCBCCCSBCCSSCEEEEEECTTCSSEEEEEET
T ss_pred eccCCceeEEeccCCCCccEEEEEECCCC-CEEEEEeCCCcEeeeccCcceeEEEecccceEEeeeecCCCceEEEEecC
Confidence 99875433222222 2334556666654 689999999999999997654333334667899999999876 6778999
Q ss_pred CCcEEEEeCCCCceEE---EecCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEecccccc--ccce
Q 019006 205 DNDVKVWDLRKGEVSM---TLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNF--EKNL 279 (347)
Q Consensus 205 dg~i~iwd~~~~~~~~---~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~--~~~~ 279 (347)
|+.|++||+++.+... ...+|...|++++|+|++++|++++.|+.|++||++... +...+..|.... ....
T Consensus 272 d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~----~~~~~~~~~~~~~~~~~~ 347 (435)
T 4e54_B 272 DQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWD----CPLGLIPHPHRHFQHLTP 347 (435)
T ss_dssp TSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSS----SEEEECCCCCCCCSSSCC
T ss_pred cceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCc----cceEEeccccccccccee
Confidence 9999999998765433 335788999999999999999999999999999998532 233333332211 1123
Q ss_pred EEEEECCCCCEEEEee------------CCCeEEEEeCCCceeeEEec-CCccCeeeE-EEcCCCCEEEEecCCCcEEee
Q 019006 280 LKCGWSPDGSKVTAGS------------SDRMVYIWDTTSRRILYKLP-GHTGSVNES-VFHATEPVIGSCSSDKQIYLG 345 (347)
Q Consensus 280 ~~~~~s~~g~~l~sgs------------~dg~i~vwd~~~~~~~~~~~-~h~~~v~~~-~~~~~~~~l~s~s~D~~i~i~ 345 (347)
..+.|+|++.++++++ .++.|++||..+++++..+. +|...|.++ +|+|++.+|++++ |++|+||
T Consensus 348 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~lasg~-d~~i~iW 426 (435)
T 4e54_B 348 IKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLASAM-GYHILIW 426 (435)
T ss_dssp CBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEEEEC-SSEEEEC
T ss_pred EEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEEEEc-CCcEEEE
Confidence 3455666666666553 34679999999999988764 688889887 6999999999876 8899999
Q ss_pred cC
Q 019006 346 EI 347 (347)
Q Consensus 346 ~~ 347 (347)
++
T Consensus 427 ~~ 428 (435)
T 4e54_B 427 SQ 428 (435)
T ss_dssp CC
T ss_pred EC
Confidence 85
No 28
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=3.1e-42 Score=303.02 Aligned_cols=292 Identities=16% Similarity=0.293 Sum_probs=238.4
Q ss_pred eEecCccccEEEEEECCCCC-eEEEeeC---CCcEEEEeccCCCeeeEEEeCcccceeEEEEcCC---CCEEEEecCCCe
Q 019006 51 MLLTGHQSAVYTMKFNPAGT-VIASGSH---DRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTD---GSQIISASPDKT 123 (347)
Q Consensus 51 ~~~~~h~~~V~~v~~~~~~~-~l~s~~~---d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~---~~~l~s~~~dg~ 123 (347)
..+.+|...|++++|+|++. ++++|+. |+.|++|++...........+|...|.+++|+|+ +.+|++++.||.
T Consensus 12 ~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~ 91 (357)
T 3i2n_A 12 HIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGN 91 (357)
T ss_dssp EEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSC
T ss_pred hhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCe
Confidence 45678999999999999996 4556665 9999999997544333344579999999999998 699999999999
Q ss_pred EEEEECCCCc-eeeeeeccCcceeEeecC-----CCCCCEEEEEcCCCceEEEeCCCCC-ceeecCC-----CCceEEEE
Q 019006 124 LRAWDVETGK-QIKKMAEHNSFVNSCCPS-----RRGPPLVVSGSDDGTAKLWDMRQRG-AIQTFPD-----KYQITAVS 191 (347)
Q Consensus 124 i~iwd~~~~~-~~~~~~~~~~~v~~~~~~-----~~~~~~~~s~~~d~~i~iwd~~~~~-~~~~~~~-----~~~v~~~~ 191 (347)
|++||+.+++ .+..+..|...+..+.+. ..+..++++++.|+.|++||++.+. .+..+.. ...+.++.
T Consensus 92 i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~ 171 (357)
T 3i2n_A 92 LHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVA 171 (357)
T ss_dssp EEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEE
T ss_pred EEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEE
Confidence 9999999887 778888899888887432 2334689999999999999999876 5555432 23688888
Q ss_pred ----EcCCCCeEEEEecCCcEEEEeCCCCceEEEecCCCCceeEEEECC---CCCEEEEEcCCCcEEEEeCCCCCCcCce
Q 019006 192 ----FSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSP---DGSYLLTNGMDCKLCIWDMRPYAPQNRC 264 (347)
Q Consensus 192 ----~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~---~~~~l~t~~~d~~i~~wd~~~~~~~~~~ 264 (347)
|++++..+++++.||.|++||+++++.... ..|...|.+++|+| +++++++++.|+.|++||++........
T Consensus 172 ~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 250 (357)
T 3i2n_A 172 FGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWE-TNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGF 250 (357)
T ss_dssp EECCCC-CCCEEEEEETTSEEEEEETTTTEEEEE-EECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEE
T ss_pred EEeccCCCCCEEEEEccCCeEEEEECccCceeee-cCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccce
Confidence 788999999999999999999998876444 56788999999999 9999999999999999999754322211
Q ss_pred e-EEEeccccccccceEEEEECCCCC-EEEEeeCCCeEEEEeCCCc-------------------eeeEEecCCccCeee
Q 019006 265 V-KILEGHQHNFEKNLLKCGWSPDGS-KVTAGSSDRMVYIWDTTSR-------------------RILYKLPGHTGSVNE 323 (347)
Q Consensus 265 ~-~~~~~~~~~~~~~~~~~~~s~~g~-~l~sgs~dg~i~vwd~~~~-------------------~~~~~~~~h~~~v~~ 323 (347)
. ..+..| ...+.+++|+|+++ +|++|+.||.|++||+..+ +.+..+.+|...|.+
T Consensus 251 ~~~~~~~~----~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~ 326 (357)
T 3i2n_A 251 ASVSEKAH----KSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISS 326 (357)
T ss_dssp EEEEEECC----SSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEE
T ss_pred eeeccCCC----cCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeE
Confidence 1 112233 45799999999998 8999999999999998753 467788999999999
Q ss_pred EEEcCCCCEEE-EecCCCcEEeecC
Q 019006 324 SVFHATEPVIG-SCSSDKQIYLGEI 347 (347)
Q Consensus 324 ~~~~~~~~~l~-s~s~D~~i~i~~~ 347 (347)
++|+|++++|+ +++.|+.|++||+
T Consensus 327 ~~~s~~~~~l~~s~~~d~~i~iw~~ 351 (357)
T 3i2n_A 327 LDWSPDKRGLCVCSSFDQTVRVLIV 351 (357)
T ss_dssp EEECSSSTTEEEEEETTSEEEEEEE
T ss_pred EEEcCCCCeEEEEecCCCcEEEEEC
Confidence 99999999998 8999999999985
No 29
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.3e-42 Score=307.34 Aligned_cols=279 Identities=16% Similarity=0.284 Sum_probs=246.1
Q ss_pred ccccEEEEEECCCCCeEEEeeCCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEECCCCcee
Q 019006 56 HQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQI 135 (347)
Q Consensus 56 h~~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~ 135 (347)
|.+.|++++|+|++++|++|+.||.|++|+.. ......+.+|...|.+++|+|++++|++++.||.|++||+.+++.+
T Consensus 107 ~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~ 184 (425)
T 1r5m_A 107 TTNQVTCLAWSHDGNSIVTGVENGELRLWNKT--GALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVM 184 (425)
T ss_dssp -CBCEEEEEECTTSSEEEEEETTSCEEEEETT--SCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEE
T ss_pred CCCceEEEEEcCCCCEEEEEeCCCeEEEEeCC--CCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEE
Confidence 78899999999999999999999999999953 3456678899999999999999999999999999999999999888
Q ss_pred eeeeccCcc---------------eeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeecC-CCCceEEEEEcCCCCeE
Q 019006 136 KKMAEHNSF---------------VNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFP-DKYQITAVSFSDASDKI 199 (347)
Q Consensus 136 ~~~~~~~~~---------------v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l 199 (347)
..+..+... +..+.+.+. ..+++++.++.|++||++++..+..+. +...+.+++|+|+++++
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 262 (425)
T 1r5m_A 185 QHFELKETGGSSINAENHSGDGSLGVDVEWVDD--DKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLL 262 (425)
T ss_dssp EEECCC---------------CCCBSCCEEEET--TEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEE
T ss_pred EEeeccccCccceeeccccCCcceeeEEEEcCC--CEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEE
Confidence 877766554 666666654 468899999999999999887776664 56789999999999999
Q ss_pred EEEecCCcEEEEeCCCCceEEEecCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEeccccccccce
Q 019006 200 YTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNL 279 (347)
Q Consensus 200 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (347)
++++.|+.|++||+++++....+..|...|.+++|+|++ ++++++.|+.|++||++. ......+..| ...+
T Consensus 263 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~----~~~~~~~~~~----~~~i 333 (425)
T 1r5m_A 263 LSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQ----NTLLALSIVD----GVPI 333 (425)
T ss_dssp EEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTT----TEEEEEEECT----TCCE
T ss_pred EEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCC----CcEeEecccC----CccE
Confidence 999999999999999999888999999999999999999 999999999999999874 3445555544 3578
Q ss_pred EEEEECCCCCEEEEeeCCCeEEEEeCCCce--------------------eeEEecCCcc--CeeeEEEcCCCCEEEEec
Q 019006 280 LKCGWSPDGSKVTAGSSDRMVYIWDTTSRR--------------------ILYKLPGHTG--SVNESVFHATEPVIGSCS 337 (347)
Q Consensus 280 ~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~--------------------~~~~~~~h~~--~v~~~~~~~~~~~l~s~s 337 (347)
.+++|+|++++|++|+.||.|++||+.+++ ++..+.+|.. .|..++|+|++++|++++
T Consensus 334 ~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~ 413 (425)
T 1r5m_A 334 FAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAY 413 (425)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEE
T ss_pred EEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEe
Confidence 899999999999999999999999999888 8899999977 999999999999999999
Q ss_pred CCCcEEeecC
Q 019006 338 SDKQIYLGEI 347 (347)
Q Consensus 338 ~D~~i~i~~~ 347 (347)
.||.|++|++
T Consensus 414 ~dg~i~iw~~ 423 (425)
T 1r5m_A 414 SLQEGSVVAI 423 (425)
T ss_dssp SSSCCEEEEC
T ss_pred cCceEEEEee
Confidence 9999999986
No 30
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.6e-43 Score=313.51 Aligned_cols=286 Identities=14% Similarity=0.228 Sum_probs=244.8
Q ss_pred cCccccEEEEEECCCCCeEEEeeCCCcEEEEeccC---CCeeeEEEeCcccceeEEEEcCC-CCEEEEecCCCeEEEEEC
Q 019006 54 TGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHG---DCKNFMVLKGHKNAILDLHWTTD-GSQIISASPDKTLRAWDV 129 (347)
Q Consensus 54 ~~h~~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~---~~~~~~~~~~h~~~v~~~~~~~~-~~~l~s~~~dg~i~iwd~ 129 (347)
..|...|++++|+|++++|++|+.||.|++|++.. .......+.+|...|.+++|+|+ +.+|++++.||.|++||+
T Consensus 64 ~~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~ 143 (416)
T 2pm9_A 64 LQVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDM 143 (416)
T ss_dssp CCCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBT
T ss_pred EecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEEC
Confidence 36899999999999999999999999999999965 23356678899999999999998 899999999999999999
Q ss_pred CCCc------eee---eeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeecCC-------CCceEEEEEc
Q 019006 130 ETGK------QIK---KMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPD-------KYQITAVSFS 193 (347)
Q Consensus 130 ~~~~------~~~---~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~~-------~~~v~~~~~~ 193 (347)
.+++ ... ....|...+..+++++.+..++++++.|+.|++||++++..+..+.. ...+.+++|+
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 223 (416)
T 2pm9_A 144 NKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWH 223 (416)
T ss_dssp TTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEEC
T ss_pred CCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEEC
Confidence 8876 322 23567788999999988678999999999999999998887776654 5679999999
Q ss_pred CCC-CeEEEEecCC---cEEEEeCCCC-ceEEEec-CCCCceeEEEECC-CCCEEEEEcCCCcEEEEeCCCCCCcCceeE
Q 019006 194 DAS-DKIYTGGIDN---DVKVWDLRKG-EVSMTLQ-GHQDMITGMSLSP-DGSYLLTNGMDCKLCIWDMRPYAPQNRCVK 266 (347)
Q Consensus 194 ~~~-~~l~~~~~dg---~i~iwd~~~~-~~~~~~~-~~~~~i~~v~~~~-~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~ 266 (347)
|++ ..+++++.|+ .|++||++++ .....+. +|...|.+++|+| ++++|++++.|+.|++||++.. ..+.
T Consensus 224 ~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~----~~~~ 299 (416)
T 2pm9_A 224 PKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESA----EQLS 299 (416)
T ss_dssp SSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSC----CEEE
T ss_pred CCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCC----ccce
Confidence 997 5889999998 9999999986 5666777 8999999999999 8999999999999999998753 4456
Q ss_pred EEeccccccccceEEEEECCCC-CEEEEeeCCCeEEEEeCCCceeeEEec------------------------------
Q 019006 267 ILEGHQHNFEKNLLKCGWSPDG-SKVTAGSSDRMVYIWDTTSRRILYKLP------------------------------ 315 (347)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~s~~g-~~l~sgs~dg~i~vwd~~~~~~~~~~~------------------------------ 315 (347)
.+..|. ..+.+++|+|++ .+|++++.||.|++||+.+........
T Consensus 300 ~~~~~~----~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (416)
T 2pm9_A 300 QFPARG----NWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFH 375 (416)
T ss_dssp EEECSS----SCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC----------------------CCSCCCSSC
T ss_pred eecCCC----CceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCccccccccccccccccccccc
Confidence 666553 468889999999 899999999999999998765432221
Q ss_pred -----CCccCeeeEEEcCCCCEEEEecCCCcEEeecC
Q 019006 316 -----GHTGSVNESVFHATEPVIGSCSSDKQIYLGEI 347 (347)
Q Consensus 316 -----~h~~~v~~~~~~~~~~~l~s~s~D~~i~i~~~ 347 (347)
.|...+..++|+|++++|++++.|++|+||++
T Consensus 376 ~~~~~~~~~~~~~~~~s~dg~~la~~~~d~~v~~w~~ 412 (416)
T 2pm9_A 376 LQAPTWYGEPSPAAHWAFGGKLVQITPDGKGVSITNP 412 (416)
T ss_dssp CCCCSTTCCCSCCCEEETTTEEECBCTTSSCBCCBCC
T ss_pred ccCCccccCCccceEEeeCCeEEEEeCCCCeEEEEEe
Confidence 16778889999999999999999999999986
No 31
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=4.4e-41 Score=293.17 Aligned_cols=283 Identities=19% Similarity=0.318 Sum_probs=244.2
Q ss_pred EecCccccEEEEEECCCCCeEEEeeCCCcEEEEeccCCC--eeeEEEe--CcccceeEEEEcCCCCEEEEecCCCeEEEE
Q 019006 52 LLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDC--KNFMVLK--GHKNAILDLHWTTDGSQIISASPDKTLRAW 127 (347)
Q Consensus 52 ~~~~h~~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~--~~~~~~~--~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw 127 (347)
...+|...|.+++|+|++++|++++ ||.|++|++.... .....+. +|...|.+++|+|++++|++++.||.|++|
T Consensus 46 ~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~ 124 (337)
T 1gxr_A 46 NTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIW 124 (337)
T ss_dssp EEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEE
T ss_pred eeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEE
Confidence 3458999999999999999999999 9999999986432 2233333 789999999999999999999999999999
Q ss_pred ECCCCc--eeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeecC-CCCceEEEEEcCCCCeEEEEec
Q 019006 128 DVETGK--QIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFP-DKYQITAVSFSDASDKIYTGGI 204 (347)
Q Consensus 128 d~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~ 204 (347)
|+.+++ ....+..|...+..+++.+.+ .++++++.|+.|++||+++++.+..+. +...+.+++|+|+++.+++++.
T Consensus 125 d~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 203 (337)
T 1gxr_A 125 DLAAPTPRIKAELTSSAPACYALAISPDS-KVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGL 203 (337)
T ss_dssp ECCCC--EEEEEEECSSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred ECCCCCcceeeecccCCCceEEEEECCCC-CEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEec
Confidence 998876 556677788888888888764 578899999999999999888777765 4678999999999999999999
Q ss_pred CCcEEEEeCCCCceEEEecCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEeccccccccceEEEEE
Q 019006 205 DNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGW 284 (347)
Q Consensus 205 dg~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (347)
||.|++||+++++....+. +...+.+++|+|+++++++++.|+.|++||++... ...+..| ...+.+++|
T Consensus 204 dg~i~~~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~-----~~~~~~~----~~~v~~~~~ 273 (337)
T 1gxr_A 204 DNTVRSWDLREGRQLQQHD-FTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPD-----KYQLHLH----ESCVLSLKF 273 (337)
T ss_dssp TSEEEEEETTTTEEEEEEE-CSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSC-----EEEECCC----SSCEEEEEE
T ss_pred CCcEEEEECCCCceEeeec-CCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCC-----eEEEcCC----ccceeEEEE
Confidence 9999999999988777765 66789999999999999999999999999997532 1233333 457899999
Q ss_pred CCCCCEEEEeeCCCeEEEEeCCCceeeEEecCCccCeeeEEEcCCCCEEEEecCCCcEEeecC
Q 019006 285 SPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGEI 347 (347)
Q Consensus 285 s~~g~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~i~~~ 347 (347)
+|++++|++++.||.|++||+.+++.+.. ..|...|..++|+|++++|++++.||.|++|++
T Consensus 274 ~~~~~~l~~~~~dg~i~~~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 274 AYCGKWFVSTGKDNLLNAWRTPYGASIFQ-SKESSSVLSCDISVDDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp CTTSSEEEEEETTSEEEEEETTTCCEEEE-EECSSCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred CCCCCEEEEecCCCcEEEEECCCCeEEEE-ecCCCcEEEEEECCCCCEEEEecCCCeEEEEEE
Confidence 99999999999999999999999988754 458889999999999999999999999999985
No 32
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=1.1e-41 Score=301.32 Aligned_cols=286 Identities=16% Similarity=0.231 Sum_probs=242.1
Q ss_pred EecCccccEEEEEECCCCCeEEEeeCCCcEEEEeccCCC-eeeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEECC
Q 019006 52 LLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDC-KNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVE 130 (347)
Q Consensus 52 ~~~~h~~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~ 130 (347)
.+..|...|++++|+|++++||+|+.|+.|++|++.+.. .....+.+|...|.+++|+|++++|++++.||.|++||+.
T Consensus 3 ~~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~ 82 (372)
T 1k8k_C 3 YHSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLK 82 (372)
T ss_dssp EEESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEE
T ss_pred eecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECC
Confidence 456799999999999999999999999999999996542 2566788999999999999999999999999999999998
Q ss_pred CCceeee--eeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCc---eee--cCCCCceEEEEEcCCCCeEEEEe
Q 019006 131 TGKQIKK--MAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGA---IQT--FPDKYQITAVSFSDASDKIYTGG 203 (347)
Q Consensus 131 ~~~~~~~--~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~---~~~--~~~~~~v~~~~~~~~~~~l~~~~ 203 (347)
+++.... +..|...+..+.+++.+ .++++++.|+.|++||++.+.. ... ..+...+.+++|+|++..+++++
T Consensus 83 ~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 161 (372)
T 1k8k_C 83 GRTWKPTLVILRINRAARCVRWAPNE-KKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGS 161 (372)
T ss_dssp TTEEEEEEECCCCSSCEEEEEECTTS-SEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEE
T ss_pred CCeeeeeEEeecCCCceeEEEECCCC-CEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEc
Confidence 8764433 35677888889888765 6889999999999999987763 222 23567899999999999999999
Q ss_pred cCCcEEEEeCC------------------CCceEEEecCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCcee
Q 019006 204 IDNDVKVWDLR------------------KGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCV 265 (347)
Q Consensus 204 ~dg~i~iwd~~------------------~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~ 265 (347)
.||.|++||++ .++....+..|...|.+++|+|++++|++++.|+.|++||++.. .++
T Consensus 162 ~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~----~~~ 237 (372)
T 1k8k_C 162 CDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKK----MAV 237 (372)
T ss_dssp TTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGT----TEE
T ss_pred CCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCC----cee
Confidence 99999999953 57788888899999999999999999999999999999999743 455
Q ss_pred EEEeccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCC--cee--------------------------------e
Q 019006 266 KILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTS--RRI--------------------------------L 311 (347)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~--~~~--------------------------------~ 311 (347)
..+..| ...+.+++|+|++.+|++| .|+.|++|++.. +.. .
T Consensus 238 ~~~~~~----~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (372)
T 1k8k_C 238 ATLASE----TLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSE 312 (372)
T ss_dssp EEEECS----SCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---
T ss_pred EEEccC----CCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccc
Confidence 566554 3468999999999999888 899999999987 421 0
Q ss_pred ------EEe-cCCccCeeeEEEc-CCC---CEEEEecCCCcEEeecC
Q 019006 312 ------YKL-PGHTGSVNESVFH-ATE---PVIGSCSSDKQIYLGEI 347 (347)
Q Consensus 312 ------~~~-~~h~~~v~~~~~~-~~~---~~l~s~s~D~~i~i~~~ 347 (347)
..+ .+|...|++++|+ +++ .+|+|++.||.|++||+
T Consensus 313 ~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~ 359 (372)
T 1k8k_C 313 GSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDV 359 (372)
T ss_dssp ------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEH
T ss_pred cCccccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEe
Confidence 233 4999999999977 555 89999999999999984
No 33
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.7e-41 Score=304.71 Aligned_cols=246 Identities=27% Similarity=0.491 Sum_probs=225.5
Q ss_pred eEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEECCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeC
Q 019006 93 FMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDM 172 (347)
Q Consensus 93 ~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~ 172 (347)
...+.+|..+|++++|+|++.+|++|+.||+|++||+.+++....+..|...|.++++++.+ .++++|+.|++|++||+
T Consensus 101 ~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~-~~l~sgs~D~~i~iwd~ 179 (410)
T 1vyh_C 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG-KLLASCSADMTIKLWDF 179 (410)
T ss_dssp SCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTS-SEEEEEETTSCCCEEET
T ss_pred eEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCC-CEEEEEeCCCeEEEEeC
Confidence 34678999999999999999999999999999999999999999999999999999998765 58999999999999999
Q ss_pred CCCCceeecC-CCCceEEEEEcCCCCeEEEEecCCcEEEEeCCCCceEEEecCCCCceeEEEECCCCCEEEEEcCCCcEE
Q 019006 173 RQRGAIQTFP-DKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLC 251 (347)
Q Consensus 173 ~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~ 251 (347)
.+...+..+. +...|.+++|+|++.++++|+.|+.|++||++++.+...+.+|...|.++.|+|+++++++++.|+.|+
T Consensus 180 ~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~ 259 (410)
T 1vyh_C 180 QGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVR 259 (410)
T ss_dssp TSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred CCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEE
Confidence 9888777765 556899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCCCCcCceeEEEeccccccccceEEEEECCC--------------------CCEEEEeeCCCeEEEEeCCCceee
Q 019006 252 IWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPD--------------------GSKVTAGSSDRMVYIWDTTSRRIL 311 (347)
Q Consensus 252 ~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~--------------------g~~l~sgs~dg~i~vwd~~~~~~~ 311 (347)
+||++. ..+...+..|. ..+.+++|+|+ |.+|++|+.||.|++||+.++.++
T Consensus 260 vwd~~~----~~~~~~~~~h~----~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~ 331 (410)
T 1vyh_C 260 VWVVAT----KECKAELREHR----HVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCL 331 (410)
T ss_dssp EEETTT----CCEEEEECCCS----SCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEE
T ss_pred EEECCC----CceeeEecCCC----ceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceE
Confidence 999974 34455565553 56889999996 679999999999999999999999
Q ss_pred EEecCCccCeeeEEEcCCCCEEEEecCCCcEEeecC
Q 019006 312 YKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGEI 347 (347)
Q Consensus 312 ~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~i~~~ 347 (347)
..+.+|...|.+++|+|++++|++++.|++|++||+
T Consensus 332 ~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~ 367 (410)
T 1vyh_C 332 MTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367 (410)
T ss_dssp EEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECC
T ss_pred EEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEEC
Confidence 999999999999999999999999999999999985
No 34
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.8e-41 Score=289.56 Aligned_cols=280 Identities=20% Similarity=0.268 Sum_probs=240.3
Q ss_pred cCeeEecCccccEEEEEECCCCCeEEEeeCCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEE
Q 019006 48 SPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAW 127 (347)
Q Consensus 48 ~~~~~~~~h~~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw 127 (347)
.+...+.+|.+.|++++| |++.+|++|+.||.|++|++.. ......+..|...|.+++|+|++++|++++.||.+++|
T Consensus 9 ~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~ 86 (313)
T 3odt_A 9 QLSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDD-QWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGV 86 (313)
T ss_dssp EEEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESS-SEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEE
T ss_pred HHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCC-CEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEE
Confidence 345678999999999999 9999999999999999999954 45556778899999999999999999999999999999
Q ss_pred ECCCC---ceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeec-CCCCceEEEEEcC-CCCeEEEE
Q 019006 128 DVETG---KQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTF-PDKYQITAVSFSD-ASDKIYTG 202 (347)
Q Consensus 128 d~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~-~~~~~v~~~~~~~-~~~~l~~~ 202 (347)
++... +.+..+..|...+..+.+. +.++++++.|+.|++|| .+.....+ .+...+.++.+.+ +++.++++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~i~~~~~~---~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~ 161 (313)
T 3odt_A 87 PLFATSGEDPLYTLIGHQGNVCSLSFQ---DGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTA 161 (313)
T ss_dssp ETTCCTTSCC-CEECCCSSCEEEEEEE---TTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEE
T ss_pred EeeecCCCCcccchhhcccCEEEEEec---CCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCEEEEE
Confidence 98654 4566777888888888872 45899999999999999 34444444 4567899999987 88999999
Q ss_pred ecCCcEEEEeCCCCceEEEecC-CCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEeccccccccceEE
Q 019006 203 GIDNDVKVWDLRKGEVSMTLQG-HQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLK 281 (347)
Q Consensus 203 ~~dg~i~iwd~~~~~~~~~~~~-~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (347)
+.||.|++|| ..+....+.. |...+.+++|+|++. +++++.|+.|++||++.. ..+..+..| ...+.+
T Consensus 162 ~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~----~~~~~~~~~----~~~i~~ 230 (313)
T 3odt_A 162 SADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTG----DVLRTYEGH----ESFVYC 230 (313)
T ss_dssp ETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTC----CEEEEEECC----SSCEEE
T ss_pred ECCCCEEEEe--cCceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCch----hhhhhhhcC----CceEEE
Confidence 9999999999 4455666666 888999999999988 999999999999999753 445566655 357899
Q ss_pred EEECCCCCEEEEeeCCCeEEEEeCCCceeeEEecCCccCeeeEEEcCCCCEEEEecCCCcEEeecC
Q 019006 282 CGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGEI 347 (347)
Q Consensus 282 ~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~i~~~ 347 (347)
++|+|++ .|++|+.||.|++||+.+++++..+..|...|..++|+|+++ +++++.||.|++||+
T Consensus 231 ~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~ 294 (313)
T 3odt_A 231 IKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGD-IIVGSSDNLVRIFSQ 294 (313)
T ss_dssp EEECTTS-CEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSC-EEEEETTSCEEEEES
T ss_pred EEEecCC-CEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCC-EEEEeCCCcEEEEeC
Confidence 9999999 689999999999999999999999999999999999999998 567999999999985
No 35
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=3.6e-41 Score=295.15 Aligned_cols=246 Identities=18% Similarity=0.285 Sum_probs=208.8
Q ss_pred CccccEEEEEECCCCCeEEEeeCCCcEEEEeccCCCee---eEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEECCC
Q 019006 55 GHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKN---FMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVET 131 (347)
Q Consensus 55 ~h~~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~---~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 131 (347)
.|...|.+++|+|++ .|++|+.||+|++||+...... ...+.+|...|.+++|+|++++|++|+.|++|++||+.+
T Consensus 80 ~~~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~ 158 (344)
T 4gqb_B 80 QTEAGVADLTWVGER-GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQ 158 (344)
T ss_dssp EESSCEEEEEEETTT-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred ccCCCEEEEEEeCCC-eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCC
Confidence 466789999999985 6789999999999999643221 234568999999999999999999999999999999999
Q ss_pred CceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeecC---CCCceEEEEEcCCC-CeEEEEecCCc
Q 019006 132 GKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFP---DKYQITAVSFSDAS-DKIYTGGIDND 207 (347)
Q Consensus 132 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~---~~~~v~~~~~~~~~-~~l~~~~~dg~ 207 (347)
++.+..+..|...|..+.+++.+..++++++.|++|++||+++++....+. +...+.+++|+|++ .++++|+.||.
T Consensus 159 ~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~ 238 (344)
T 4gqb_B 159 QVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGT 238 (344)
T ss_dssp TEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSE
T ss_pred CcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCc
Confidence 999999999999999999999888899999999999999999988877664 33568999999864 57789999999
Q ss_pred EEEEeCCCCceEEEecCCCCceeEEEECCCC-CEEEEEcCCCcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECC
Q 019006 208 VKVWDLRKGEVSMTLQGHQDMITGMSLSPDG-SYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSP 286 (347)
Q Consensus 208 i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~-~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 286 (347)
|++||+++++.+.++.+|...|++++|+|++ ++|++++.|++|++||++.. .+ ..+.+| ...|.+++|+|
T Consensus 239 v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~----~~-~~~~~H----~~~V~~v~~sp 309 (344)
T 4gqb_B 239 VSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLS----EL-FRSQAH----RDFVRDATWSP 309 (344)
T ss_dssp EEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCC----EE-EEECCC----SSCEEEEEECS
T ss_pred EEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCC----cE-EEEcCC----CCCEEEEEEeC
Confidence 9999999999999999999999999999997 57999999999999998742 23 234555 35799999999
Q ss_pred CCC-EEEEeeCCCeEEEEeCCCcee
Q 019006 287 DGS-KVTAGSSDRMVYIWDTTSRRI 310 (347)
Q Consensus 287 ~g~-~l~sgs~dg~i~vwd~~~~~~ 310 (347)
+++ +|++||.||.|++|++.+..+
T Consensus 310 ~~~~llas~s~D~~v~~w~v~~~~~ 334 (344)
T 4gqb_B 310 LNHSLLTTVGWDHQVVHHVVPTEPL 334 (344)
T ss_dssp SSTTEEEEEETTSCEEEEECCC---
T ss_pred CCCeEEEEEcCCCeEEEEECCCCCC
Confidence 986 577999999999999987544
No 36
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=4.4e-43 Score=311.31 Aligned_cols=289 Identities=15% Similarity=0.173 Sum_probs=226.5
Q ss_pred EecCccccEEEEEECCCCCeEEEeeCCCcEEEEeccCCC-eeeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEECC
Q 019006 52 LLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDC-KNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVE 130 (347)
Q Consensus 52 ~~~~h~~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~ 130 (347)
.+..|.+.|++++|+|++++||+|+.|+.|++|++.... .....+.+|...|.+++|+|++++|++++.|+.|++||+.
T Consensus 6 ~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~ 85 (377)
T 3dwl_C 6 VLHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKR 85 (377)
T ss_dssp EEEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC---
T ss_pred eEecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcC
Confidence 455677899999999999999999999999999997532 4455678999999999999999999999999999999998
Q ss_pred CCc---eeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCc---eeecC--CCCceEEEEEcCCCCeEEEE
Q 019006 131 TGK---QIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGA---IQTFP--DKYQITAVSFSDASDKIYTG 202 (347)
Q Consensus 131 ~~~---~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~---~~~~~--~~~~v~~~~~~~~~~~l~~~ 202 (347)
+++ ....+..|...+..+++++++ .++++++.|+.|++||++.+.. ...+. +...+.+++|+|++.+++++
T Consensus 86 ~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~ 164 (377)
T 3dwl_C 86 PDGTWKQTLVLLRLNRAATFVRWSPNE-DKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAG 164 (377)
T ss_dssp ---CCCCEEECCCCSSCEEEEECCTTS-SCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEE
T ss_pred CCCceeeeeEecccCCceEEEEECCCC-CEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEE
Confidence 876 566677888999999998865 5788999999999999987762 44443 67789999999999999999
Q ss_pred ecCCcEEEEeCC------------------CCceEEEecCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCce
Q 019006 203 GIDNDVKVWDLR------------------KGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRC 264 (347)
Q Consensus 203 ~~dg~i~iwd~~------------------~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~ 264 (347)
+.|+.|++||++ .++....+ +|...|.+++|+|++++|++++.|+.|++||++........
T Consensus 165 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 243 (377)
T 3dwl_C 165 CADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRA 243 (377)
T ss_dssp ESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEE
T ss_pred eCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCccee
Confidence 999999999985 24455566 89999999999999999999999999999999865432222
Q ss_pred eEEEeccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCCce-----------------------------------
Q 019006 265 VKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRR----------------------------------- 309 (347)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~----------------------------------- 309 (347)
+..+..| ...+.+++|+|++++|++|+.++.+ +|+.....
T Consensus 244 ~~~~~~~----~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (377)
T 3dwl_C 244 LITVKLS----QLPLRSLLWANESAIVAAGYNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFT 318 (377)
T ss_dssp CCCEECS----SSCEEEEEEEETTEEEEEESSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC-------
T ss_pred eEeecCC----CCceEEEEEcCCCCEEEEEcCCcEE-EEEeCCCceEEEeeecccccccccccccccccccccccccccc
Confidence 4445554 3568999999999999999877766 66554111
Q ss_pred ----eeE-------------EecCCccCeeeEEEcCCCC----EEEEecCCCcEEeecC
Q 019006 310 ----ILY-------------KLPGHTGSVNESVFHATEP----VIGSCSSDKQIYLGEI 347 (347)
Q Consensus 310 ----~~~-------------~~~~h~~~v~~~~~~~~~~----~l~s~s~D~~i~i~~~ 347 (347)
... ....|.+.|+++++.+... .|+|+|.||.|++||+
T Consensus 319 ~~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 319 ALRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp ------------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred cccccccchhhccccccccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence 000 0113999999999776653 5999999999999996
No 37
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.5e-42 Score=310.12 Aligned_cols=285 Identities=19% Similarity=0.356 Sum_probs=243.7
Q ss_pred ccccEEEEEECCCCC-eEEEe----------eCCCcEEEEeccCCCe-eeEEEeCcccceeEEEEcCCCCEEEEecCCCe
Q 019006 56 HQSAVYTMKFNPAGT-VIASG----------SHDRDIFLWHVHGDCK-NFMVLKGHKNAILDLHWTTDGSQIISASPDKT 123 (347)
Q Consensus 56 h~~~V~~v~~~~~~~-~l~s~----------~~d~~v~~w~~~~~~~-~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~ 123 (347)
+...|.+++|+|+++ +||+| +.|+.|++|++..... .......|...|.+++|+|++++|++++.||.
T Consensus 11 ~~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~ 90 (416)
T 2pm9_A 11 EFSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGALDNGS 90 (416)
T ss_dssp EEEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEESSSC
T ss_pred hhhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEccCCe
Confidence 445788999999987 99999 8999999999864321 11222368899999999999999999999999
Q ss_pred EEEEECCC----CceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCC------ceee----cCCCCceEE
Q 019006 124 LRAWDVET----GKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRG------AIQT----FPDKYQITA 189 (347)
Q Consensus 124 i~iwd~~~----~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~------~~~~----~~~~~~v~~ 189 (347)
|++||+.+ .+.+..+..|...+..+.+++.+..++++++.|+.|++||+++.. .... ..+...+.+
T Consensus 91 v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 170 (416)
T 2pm9_A 91 LELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVIS 170 (416)
T ss_dssp EEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCE
T ss_pred EEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeE
Confidence 99999987 357778888999999999988766789999999999999998775 2222 235568999
Q ss_pred EEEcCC-CCeEEEEecCCcEEEEeCCCCceEEEecCC------CCceeEEEECCCC-CEEEEEcCCC---cEEEEeCCCC
Q 019006 190 VSFSDA-SDKIYTGGIDNDVKVWDLRKGEVSMTLQGH------QDMITGMSLSPDG-SYLLTNGMDC---KLCIWDMRPY 258 (347)
Q Consensus 190 ~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~------~~~i~~v~~~~~~-~~l~t~~~d~---~i~~wd~~~~ 258 (347)
++|+|+ +..+++++.|+.|++||+++++....+..| ...|.+++|+|++ .++++++.|+ .|++||++..
T Consensus 171 ~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~ 250 (416)
T 2pm9_A 171 LAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNA 250 (416)
T ss_dssp EEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTST
T ss_pred EEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCC
Confidence 999999 788999999999999999999988888776 7889999999997 6899999998 9999999853
Q ss_pred CCcCceeEEEe-ccccccccceEEEEECC-CCCEEEEeeCCCeEEEEeCCCceeeEEecCCccCeeeEEEcCCC-CEEEE
Q 019006 259 APQNRCVKILE-GHQHNFEKNLLKCGWSP-DGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATE-PVIGS 335 (347)
Q Consensus 259 ~~~~~~~~~~~-~~~~~~~~~~~~~~~s~-~g~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s 335 (347)
. .....+. +| ...+.+++|+| ++.+|++|+.||.|++||+.+++.+..+.+|...|.+++|+|++ .+|++
T Consensus 251 ~---~~~~~~~~~~----~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s 323 (416)
T 2pm9_A 251 N---TPLQTLNQGH----QKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFAC 323 (416)
T ss_dssp T---SCSBCCCSCC----SSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEE
T ss_pred C---CCcEEeecCc----cCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEE
Confidence 2 2223333 33 35789999999 99999999999999999999999999999999999999999999 89999
Q ss_pred ecCCCcEEeecC
Q 019006 336 CSSDKQIYLGEI 347 (347)
Q Consensus 336 ~s~D~~i~i~~~ 347 (347)
++.|+.|++|++
T Consensus 324 ~~~d~~i~iw~~ 335 (416)
T 2pm9_A 324 ASFDNKIEVQTL 335 (416)
T ss_dssp CCSSSEEEEEES
T ss_pred EecCCcEEEEEc
Confidence 999999999985
No 38
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=1.9e-42 Score=306.08 Aligned_cols=283 Identities=12% Similarity=0.127 Sum_probs=222.0
Q ss_pred ccEEEEEECCCCCeEEEeeCCC-------cEEEEeccCCCe---------eeEEEeCcccceeEEEEcCCCCEEEEe---
Q 019006 58 SAVYTMKFNPAGTVIASGSHDR-------DIFLWHVHGDCK---------NFMVLKGHKNAILDLHWTTDGSQIISA--- 118 (347)
Q Consensus 58 ~~V~~v~~~~~~~~l~s~~~d~-------~v~~w~~~~~~~---------~~~~~~~h~~~v~~~~~~~~~~~l~s~--- 118 (347)
-+|++++|+|++++||+||.|. .|++|++..... ....+.+|.+.|.+++++ ++.++++
T Consensus 15 ~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~--~~~~~~g~~~ 92 (365)
T 4h5i_A 15 YPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDAS--KGIILVGCNE 92 (365)
T ss_dssp SCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEE--TTEEEEECCC
T ss_pred CCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeC--CCEEEEEECC
Confidence 4799999999999999998654 499999864321 113467888889988776 4456654
Q ss_pred --------cCCCeEEEEECCCCceeee---------eeccCcceeEeecCCCCCCEE-EEEcCCCceEEEeCCCCCceee
Q 019006 119 --------SPDKTLRAWDVETGKQIKK---------MAEHNSFVNSCCPSRRGPPLV-VSGSDDGTAKLWDMRQRGAIQT 180 (347)
Q Consensus 119 --------~~dg~i~iwd~~~~~~~~~---------~~~~~~~v~~~~~~~~~~~~~-~s~~~d~~i~iwd~~~~~~~~~ 180 (347)
+.|+.+|+|++........ ...+..++..++++|++..++ ++++.|++|++||++++..+..
T Consensus 93 ~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~ 172 (365)
T 4h5i_A 93 NSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFE 172 (365)
T ss_dssp CHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEE
T ss_pred CccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEE
Confidence 4578899999865432111 112334577788998876653 3556899999999999988888
Q ss_pred cCCCCceEEEEEcCCCCeEEEEecCCcEEEEeCCCCceEE--EecCCCCceeEEEECCCCCEEEEEcCCC----cEEEEe
Q 019006 181 FPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSM--TLQGHQDMITGMSLSPDGSYLLTNGMDC----KLCIWD 254 (347)
Q Consensus 181 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~--~~~~~~~~i~~v~~~~~~~~l~t~~~d~----~i~~wd 254 (347)
+.+...|.+++|+|+++++++++.+ .+++|+..+++... ....|...|.+++|+|+++++++++.|+ .+++||
T Consensus 173 ~~~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~ 251 (365)
T 4h5i_A 173 IETRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKIS 251 (365)
T ss_dssp EECSSCCCEEEECTTSSEEEEECSS-CEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEE
T ss_pred eCCCCceEEEEEccCCceEEeccce-eEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecc
Confidence 8888899999999999999998855 56777777666543 3456888899999999999999998887 688888
Q ss_pred CCCCCCcCceeEEEeccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCCceeeEEe-cCCccCeeeEEEcCCCCEE
Q 019006 255 MRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKL-PGHTGSVNESVFHATEPVI 333 (347)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~~~~-~~h~~~v~~~~~~~~~~~l 333 (347)
+............+.+| ...|.+++|+|||++||+|+.|+.|+|||+.+++++..+ .+|...|++++|+|++++|
T Consensus 252 ~~~~~~~~~~~~~~~~~----~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~l 327 (365)
T 4h5i_A 252 IKSGNTSVLRSKQVTNR----FKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYV 327 (365)
T ss_dssp EETTEEEEEEEEEEESS----CSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEE
T ss_pred cccceecceeeeeecCC----CCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEE
Confidence 76432111112233333 357899999999999999999999999999999999875 7999999999999999999
Q ss_pred EEecCCCcEEeecC
Q 019006 334 GSCSSDKQIYLGEI 347 (347)
Q Consensus 334 ~s~s~D~~i~i~~~ 347 (347)
||+|.|++|+||||
T Consensus 328 aS~S~D~tvrvw~i 341 (365)
T 4h5i_A 328 ASVSAANTIHIIKL 341 (365)
T ss_dssp EEEETTSEEEEEEC
T ss_pred EEEeCCCeEEEEEc
Confidence 99999999999986
No 39
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=8.2e-41 Score=290.46 Aligned_cols=246 Identities=23% Similarity=0.413 Sum_probs=223.1
Q ss_pred eEecCccccEEEEEECCCCCeEEEeeCCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEECC
Q 019006 51 MLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVE 130 (347)
Q Consensus 51 ~~~~~h~~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~ 130 (347)
..+.||...|.+++|+|++.++++++.|++|++||+.. .+....+..|...+.+++|+|++++|++++.||.|++|++.
T Consensus 74 ~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~-~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~ 152 (321)
T 3ow8_A 74 WSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLEN-GKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVE 152 (321)
T ss_dssp EEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTT-TEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETT
T ss_pred eeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCC-CCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcC
Confidence 35789999999999999999999999999999999964 45566788899999999999999999999999999999999
Q ss_pred CCceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeecC-CCCceEEEEEcCCCCeEEEEecCCcEE
Q 019006 131 TGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFP-DKYQITAVSFSDASDKIYTGGIDNDVK 209 (347)
Q Consensus 131 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~ 209 (347)
+++....+..+...+..+++++++ .++++|+.|+.|++||+++++.+..+. +...|.+++|+|++++|++|+.|+.|+
T Consensus 153 ~~~~~~~~~~~~~~v~~~~~spdg-~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~ 231 (321)
T 3ow8_A 153 SGKKEYSLDTRGKFILSIAYSPDG-KYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIK 231 (321)
T ss_dssp TCSEEEEEECSSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEE
T ss_pred CCceeEEecCCCceEEEEEECCCC-CEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEE
Confidence 999888888888889999998875 588999999999999999988887775 456899999999999999999999999
Q ss_pred EEeCCCCceEEEecCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCC
Q 019006 210 VWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGS 289 (347)
Q Consensus 210 iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~ 289 (347)
+||+++++....+.+|...|.+++|+|++++|++++.|++|++||++. ..++..+.+|. ..+.+++|+|+++
T Consensus 232 iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~----~~~~~~~~~h~----~~v~~v~~s~~g~ 303 (321)
T 3ow8_A 232 IYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGT----RTCVHTFFDHQ----DQVWGVKYNGNGS 303 (321)
T ss_dssp EEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT----TEEEEEECCCS----SCEEEEEECTTSS
T ss_pred EEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCC----CEEEEEEcCCC----CcEEEEEECCCCC
Confidence 999999999999999999999999999999999999999999999874 45566666653 5799999999999
Q ss_pred EEEEeeCCCeEEEEeCC
Q 019006 290 KVTAGSSDRMVYIWDTT 306 (347)
Q Consensus 290 ~l~sgs~dg~i~vwd~~ 306 (347)
+|++++.||.|++||..
T Consensus 304 ~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 304 KIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp EEEEEETTCCEEEEECC
T ss_pred EEEEEeCCCeEEEEeCC
Confidence 99999999999999963
No 40
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=6.8e-41 Score=287.91 Aligned_cols=254 Identities=26% Similarity=0.460 Sum_probs=210.1
Q ss_pred eeEecCccccEEEEEECCCCCeEEEeeCCCcEEEEeccCC-CeeeEEEeCcccceeEEEEcCC--CCEEEEecCCCeEEE
Q 019006 50 IMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGD-CKNFMVLKGHKNAILDLHWTTD--GSQIISASPDKTLRA 126 (347)
Q Consensus 50 ~~~~~~h~~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~-~~~~~~~~~h~~~v~~~~~~~~--~~~l~s~~~dg~i~i 126 (347)
+..+.+|.+.|++++|+|+|++||+|+.|++|++|++.+. .+....+.+|...|.+++|+++ +++|++|+.|++|++
T Consensus 2 ~~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~i 81 (297)
T 2pm7_B 2 VVIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMI 81 (297)
T ss_dssp CEECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEE
T ss_pred ceeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEE
Confidence 3567899999999999999999999999999999998642 3456788999999999999863 889999999999999
Q ss_pred EECCCCc--eeeeeeccCcceeEeecCCCC-CCEEEEEcCCCceEEEeCCCCCc---eeecCCCCceEEEEEcCC-----
Q 019006 127 WDVETGK--QIKKMAEHNSFVNSCCPSRRG-PPLVVSGSDDGTAKLWDMRQRGA---IQTFPDKYQITAVSFSDA----- 195 (347)
Q Consensus 127 wd~~~~~--~~~~~~~~~~~v~~~~~~~~~-~~~~~s~~~d~~i~iwd~~~~~~---~~~~~~~~~v~~~~~~~~----- 195 (347)
||+.+++ .+..+..|...+.++++++.. ..++++++.|++|++||++.... .....+...+.+++|+|+
T Consensus 82 Wd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~ 161 (297)
T 2pm7_B 82 WKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEED 161 (297)
T ss_dssp EEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC----
T ss_pred EEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCccccc
Confidence 9998774 455667788899999998762 46899999999999999986532 222345678999999997
Q ss_pred --------CCeEEEEecCCcEEEEeCCCCc----eEEEecCCCCceeEEEECCCC---CEEEEEcCCCcEEEEeCCCCCC
Q 019006 196 --------SDKIYTGGIDNDVKVWDLRKGE----VSMTLQGHQDMITGMSLSPDG---SYLLTNGMDCKLCIWDMRPYAP 260 (347)
Q Consensus 196 --------~~~l~~~~~dg~i~iwd~~~~~----~~~~~~~~~~~i~~v~~~~~~---~~l~t~~~d~~i~~wd~~~~~~ 260 (347)
++.|++|+.|+.|++||+++++ ....+.+|...|.+++|+|++ ++|++++.|++|++||++....
T Consensus 162 ~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~ 241 (297)
T 2pm7_B 162 GEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQG 241 (297)
T ss_dssp --------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTS
T ss_pred ccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCC
Confidence 4689999999999999998765 566788999999999999984 8999999999999999875321
Q ss_pred cCceeEEEeccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCC
Q 019006 261 QNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTT 306 (347)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~ 306 (347)
.. ....+.. ..+...+.+++|+|+|++|++|+.||.|++|+..
T Consensus 242 ~~-~~~~~~~--~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 242 PW-KKTLLKE--EKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284 (297)
T ss_dssp CC-EEEESSS--SCCSSCEEEEEECSSSCCEEEEETTSCEEEEEEC
T ss_pred cc-ceeeeec--ccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEEC
Confidence 11 1112211 1234679999999999999999999999999975
No 41
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1e-40 Score=299.84 Aligned_cols=281 Identities=20% Similarity=0.306 Sum_probs=242.3
Q ss_pred CccccEEEEEECCCCC-eEEEeeCCCcEEEEec----cCCCe-----eeEEEeC----------cccceeEEEEcCCCCE
Q 019006 55 GHQSAVYTMKFNPAGT-VIASGSHDRDIFLWHV----HGDCK-----NFMVLKG----------HKNAILDLHWTTDGSQ 114 (347)
Q Consensus 55 ~h~~~V~~v~~~~~~~-~l~s~~~d~~v~~w~~----~~~~~-----~~~~~~~----------h~~~v~~~~~~~~~~~ 114 (347)
.|.+.|++++|+|+++ +||+|+.||.|++|++ ..... ....+.. |...|.+++|+|++++
T Consensus 43 ~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 122 (425)
T 1r5m_A 43 VKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNS 122 (425)
T ss_dssp EECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSE
T ss_pred eccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCE
Confidence 4559999999999999 9999999999999999 54331 2333333 6889999999999999
Q ss_pred EEEecCCCeEEEEECCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeecCCCC-c-------
Q 019006 115 IISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKY-Q------- 186 (347)
Q Consensus 115 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~~~~-~------- 186 (347)
|++++.||.|++|| .+++.+..+..|...+..+++.+.+ .++++++.|+.|++||+.++..+..+.... .
T Consensus 123 l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 200 (425)
T 1r5m_A 123 IVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDG-THIISMDVENVTILWNVISGTVMQHFELKETGGSSINAE 200 (425)
T ss_dssp EEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTS-SEEEEEETTCCEEEEETTTTEEEEEECCC----------
T ss_pred EEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCC-CEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeec
Confidence 99999999999999 6677888888899999999998765 578899999999999999888777665432 2
Q ss_pred --------eEEEEEcCCCCeEEEEecCCcEEEEeCCCCceEEEecCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCC
Q 019006 187 --------ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPY 258 (347)
Q Consensus 187 --------v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~ 258 (347)
+.++.|+++ ..+++++.+|.|++||+++++....+..|...|.+++|+|++++|++++.|+.|++||++..
T Consensus 201 ~~~~~~~~~~~~~~~~~-~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~ 279 (425)
T 1r5m_A 201 NHSGDGSLGVDVEWVDD-DKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNG 279 (425)
T ss_dssp -----CCCBSCCEEEET-TEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSB
T ss_pred cccCCcceeeEEEEcCC-CEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCC
Confidence 888899886 56889999999999999999888899999999999999999999999999999999998753
Q ss_pred CCcCceeEEEeccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCCceeeEEecCCccCeeeEEEcCCCCEEEEecC
Q 019006 259 APQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSS 338 (347)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~ 338 (347)
.....+..| ...+.+++|+|++ +|++++.||.|++||+.+++.+..+..|...|..++|+|++++|++++.
T Consensus 280 ----~~~~~~~~~----~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~ 350 (425)
T 1r5m_A 280 ----NSQNCFYGH----SQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFM 350 (425)
T ss_dssp ----SCSEEECCC----SSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEET
T ss_pred ----ccceEecCC----CccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEEC
Confidence 334445444 3578999999999 9999999999999999999999999999999999999999999999999
Q ss_pred CCcEEeecC
Q 019006 339 DKQIYLGEI 347 (347)
Q Consensus 339 D~~i~i~~~ 347 (347)
||.|++||+
T Consensus 351 dg~i~i~~~ 359 (425)
T 1r5m_A 351 DGQVNVYDL 359 (425)
T ss_dssp TSCEEEEEC
T ss_pred CCeEEEEEC
Confidence 999999985
No 42
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.5e-40 Score=296.30 Aligned_cols=281 Identities=20% Similarity=0.386 Sum_probs=235.3
Q ss_pred ecCcccc--EEEEEECCCCCeEEEeeCCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEECC
Q 019006 53 LTGHQSA--VYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVE 130 (347)
Q Consensus 53 ~~~h~~~--V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~ 130 (347)
..+|... +.++.|++ ..+++++.|+.|++|+.............|...|.+++|+|++++|++++.||.|++||+.
T Consensus 87 ~~~~~~~~~~~~~~~s~--~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~ 164 (401)
T 4aez_A 87 APGIIDDYYLNLLDWSN--LNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVE 164 (401)
T ss_dssp CTTCCCCTTCBCEEECT--TSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred CCCCcCCceEEEEeecC--CCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECc
Confidence 3477665 44566654 5688899999999999965433322333488999999999999999999999999999999
Q ss_pred CCceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCC-CCceeec-CCCCceEEEEEcCCCCeEEEEecCCcE
Q 019006 131 TGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQ-RGAIQTF-PDKYQITAVSFSDASDKIYTGGIDNDV 208 (347)
Q Consensus 131 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~-~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i 208 (347)
+++.+..+..|...+..+.+. +.++++|+.|+.|++||++. ......+ .+...+.+++|+|++..+++++.|+.|
T Consensus 165 ~~~~~~~~~~~~~~v~~~~~~---~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v 241 (401)
T 4aez_A 165 SQTKLRTMAGHQARVGCLSWN---RHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVV 241 (401)
T ss_dssp TCCEEEEECCCSSCEEEEEEE---TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred CCeEEEEecCCCCceEEEEEC---CCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeE
Confidence 999999999999999988883 46899999999999999984 4444444 466789999999999999999999999
Q ss_pred EEEeCCCCceEEEecCCCCceeEEEECCCCC-EEEEEc--CCCcEEEEeCCCCCCcCceeEEEeccccccccceEEEEEC
Q 019006 209 KVWDLRKGEVSMTLQGHQDMITGMSLSPDGS-YLLTNG--MDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWS 285 (347)
Q Consensus 209 ~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~-~l~t~~--~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 285 (347)
++||+++++....+..|...|.+++|+|++. .+++++ .|+.|++||++.. .+...+.. ...+.+++|+
T Consensus 242 ~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~----~~~~~~~~-----~~~v~~~~~s 312 (401)
T 4aez_A 242 QIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATG----ARVNTVDA-----GSQVTSLIWS 312 (401)
T ss_dssp EEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTC----CEEEEEEC-----SSCEEEEEEC
T ss_pred EEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCC----CEEEEEeC-----CCcEEEEEEC
Confidence 9999999999999999999999999999765 555554 7999999999743 34444432 2468999999
Q ss_pred CCCCEEEE--eeCCCeEEEEeCCCceee--EEecCCccCeeeEEEcCCCCEEEEecCCCcEEeecC
Q 019006 286 PDGSKVTA--GSSDRMVYIWDTTSRRIL--YKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGEI 347 (347)
Q Consensus 286 ~~g~~l~s--gs~dg~i~vwd~~~~~~~--~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~i~~~ 347 (347)
|++++|++ |+.||.|++||+.+++.. ..+.+|...|.+++|+|++++|++++.||.|++|++
T Consensus 313 ~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~ 378 (401)
T 4aez_A 313 PHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRV 378 (401)
T ss_dssp SSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEEC
T ss_pred CCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEEC
Confidence 99999999 558999999999986554 457899999999999999999999999999999985
No 43
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=1.3e-40 Score=291.28 Aligned_cols=283 Identities=13% Similarity=0.180 Sum_probs=242.6
Q ss_pred EecCccccEEEEEECCCCCeEEEeeCCCcEEEEeccCCC--eeeEEEeCcccceeEEEEcCCCC-EEEEecCCCeEEEEE
Q 019006 52 LLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDC--KNFMVLKGHKNAILDLHWTTDGS-QIISASPDKTLRAWD 128 (347)
Q Consensus 52 ~~~~h~~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~--~~~~~~~~h~~~v~~~~~~~~~~-~l~s~~~dg~i~iwd 128 (347)
...+|.+.|++++|+|++++|++++.|+.|++|++.... .....+.+|...|.+++|+|+++ +|++++.||.|++||
T Consensus 6 ~~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd 85 (342)
T 1yfq_A 6 IEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVD 85 (342)
T ss_dssp CSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEEC
T ss_pred cccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEE
Confidence 346899999999999999999999999999999997543 12445668999999999999999 999999999999999
Q ss_pred C-CCCceeeeeec--cCcceeEeecCCCCCCEEEEEcCCCceEEEeCCC---------CCceeecCCCCceEEEEEcCCC
Q 019006 129 V-ETGKQIKKMAE--HNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQ---------RGAIQTFPDKYQITAVSFSDAS 196 (347)
Q Consensus 129 ~-~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~---------~~~~~~~~~~~~v~~~~~~~~~ 196 (347)
+ .+++. ..+.. |...+..+++.+ ..++++++.|+.|++||+++ ...+..+.+...+.+++|++++
T Consensus 86 ~~~~~~~-~~~~~~~~~~~v~~l~~~~--~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 162 (342)
T 1yfq_A 86 LIGSPSF-QALTNNEANLGICRICKYG--DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSR 162 (342)
T ss_dssp SSSSSSE-EECBSCCCCSCEEEEEEET--TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSE
T ss_pred eccCCce-EeccccCCCCceEEEEeCC--CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEeeCCceEEEEecCCc
Confidence 9 77654 66777 888999998887 56899999999999999987 7777777778889999999876
Q ss_pred CeEEEEecCCcEEEEeCCC-Cc--eEEEecCCCCceeEEEECC-CCCEEEEEcCCCcEEEEeCCCC--CCcCceeEEEec
Q 019006 197 DKIYTGGIDNDVKVWDLRK-GE--VSMTLQGHQDMITGMSLSP-DGSYLLTNGMDCKLCIWDMRPY--APQNRCVKILEG 270 (347)
Q Consensus 197 ~~l~~~~~dg~i~iwd~~~-~~--~~~~~~~~~~~i~~v~~~~-~~~~l~t~~~d~~i~~wd~~~~--~~~~~~~~~~~~ 270 (347)
+++++.|+.|++||+++ +. .......|...+.+++|+| +++++++++.||.+++||++.. .........+..
T Consensus 163 --l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~ 240 (342)
T 1yfq_A 163 --LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRC 240 (342)
T ss_dssp --EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEEC
T ss_pred --EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeec
Confidence 99999999999999988 54 3344556788899999999 9999999999999999999754 111234455665
Q ss_pred cccc-----cccceEEEEECCCCCEEEEeeCCCeEEEEeCCCceeeEEecCC-ccCeeeEEEcCCCCEEEEecCCCc
Q 019006 271 HQHN-----FEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGH-TGSVNESVFHATEPVIGSCSSDKQ 341 (347)
Q Consensus 271 ~~~~-----~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~~~~~~h-~~~v~~~~~~~~~~~l~s~s~D~~ 341 (347)
|... ....+.+++|+|++++|++|+.||.|++||+.+++++..+.+| ...|.+++ |++.+|++++.||.
T Consensus 241 ~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~--~~~~~l~s~s~Dg~ 315 (342)
T 1yfq_A 241 HRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIA--CSDNILCLATSDDT 315 (342)
T ss_dssp CCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEEE--ECSSEEEEEEECTH
T ss_pred ccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhcccCCCceEec--CCCCeEEEEecCCc
Confidence 5321 1237999999999999999999999999999999999999998 99999999 99999999999998
No 44
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=3.8e-40 Score=294.77 Aligned_cols=294 Identities=24% Similarity=0.306 Sum_probs=235.1
Q ss_pred CeeEecCccccEEEEEECC-CCCeEEEeeCCCcEEEEeccCCCeee-EEE-----------eCcccceeEEEEcC-CCCE
Q 019006 49 PIMLLTGHQSAVYTMKFNP-AGTVIASGSHDRDIFLWHVHGDCKNF-MVL-----------KGHKNAILDLHWTT-DGSQ 114 (347)
Q Consensus 49 ~~~~~~~h~~~V~~v~~~~-~~~~l~s~~~d~~v~~w~~~~~~~~~-~~~-----------~~h~~~v~~~~~~~-~~~~ 114 (347)
....+.+|.+.|++++|+| ++++||+|+.||.|++|++....... ... .+|...|.+++|+| ++.+
T Consensus 35 ~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 114 (408)
T 4a11_B 35 DRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGM 114 (408)
T ss_dssp TEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTC
T ss_pred ceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcE
Confidence 4557789999999999999 99999999999999999996432211 111 25999999999999 7789
Q ss_pred EEEecCCCeEEEEECCCCceeeeeeccCcceeEeecCCC--CCCEEEEEcCCCceEEEeCCCCCceeecC-CCCceEEEE
Q 019006 115 IISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRR--GPPLVVSGSDDGTAKLWDMRQRGAIQTFP-DKYQITAVS 191 (347)
Q Consensus 115 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~~s~~~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~ 191 (347)
|++++.||.|++||+.+++....+. +...+..+.+.+. +..++++++.|+.|++||++++..+..+. +...+.+++
T Consensus 115 l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~ 193 (408)
T 4a11_B 115 FTSSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVS 193 (408)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEE
T ss_pred EEEEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEE
Confidence 9999999999999999988776665 4555666666554 33489999999999999999888777765 567899999
Q ss_pred EcCCCCe-EEEEecCCcEEEEeCCCCc-eEEEe---------------cCCCCceeEEEECCCCCEEEEEcCCCcEEEEe
Q 019006 192 FSDASDK-IYTGGIDNDVKVWDLRKGE-VSMTL---------------QGHQDMITGMSLSPDGSYLLTNGMDCKLCIWD 254 (347)
Q Consensus 192 ~~~~~~~-l~~~~~dg~i~iwd~~~~~-~~~~~---------------~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd 254 (347)
|+|++.. +++++.||.|++||++.+. ....+ ..|...|.+++|+|++++|++++.|+.|++||
T Consensus 194 ~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd 273 (408)
T 4a11_B 194 WSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWN 273 (408)
T ss_dssp ECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred ECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEE
Confidence 9999985 8899999999999998765 33333 56888999999999999999999999999999
Q ss_pred CCCCCCcCceeEEEecccccc-ccceEEEEECCCCCEEEEeeCCCeEEEEeCCCceeeEEecCCccCeeeEEEcCCCCEE
Q 019006 255 MRPYAPQNRCVKILEGHQHNF-EKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVI 333 (347)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 333 (347)
++....... ...+.... ............+..+++++.|+.|++||+.+++.+..+.+|.+.|.+++|+|++++|
T Consensus 274 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 349 (408)
T 4a11_B 274 SSNGENTLV----NYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQEL 349 (408)
T ss_dssp TTTCCBCCC----CCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEE
T ss_pred CCCCcccee----ccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEE
Confidence 986432211 11111000 1111111223345667777889999999999999999999999999999999999999
Q ss_pred EEecCCCcEEeecC
Q 019006 334 GSCSSDKQIYLGEI 347 (347)
Q Consensus 334 ~s~s~D~~i~i~~~ 347 (347)
++++.||.|++||+
T Consensus 350 ~s~~~dg~i~iw~~ 363 (408)
T 4a11_B 350 YSGSRDCNILAWVP 363 (408)
T ss_dssp EEEETTSCEEEEEE
T ss_pred EEECCCCeEEEEeC
Confidence 99999999999984
No 45
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=7.3e-40 Score=295.06 Aligned_cols=275 Identities=21% Similarity=0.418 Sum_probs=230.8
Q ss_pred cEEEEEECCCCCeEEEeeCCCcEEEEeccCC-CeeeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEECCCCceeee
Q 019006 59 AVYTMKFNPAGTVIASGSHDRDIFLWHVHGD-CKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKK 137 (347)
Q Consensus 59 ~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 137 (347)
.++.|+|+++ ++||+|. |++|++||.... ......+.+|...|++|+|+|+|++|++|+.||.|++||+.+++.+..
T Consensus 107 y~~~l~wS~~-n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~ 184 (420)
T 4gga_A 107 YLNLVDWSSG-NVLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRN 184 (420)
T ss_dssp TCBCEEECTT-SEEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEE
T ss_pred cceeEEECCC-CEEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEE
Confidence 4678999975 5787765 899999998643 223334567888999999999999999999999999999999999999
Q ss_pred eeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCc-eeec-CCCCceEEEEEcCCCCeEEEEecCCcEEEEeCCC
Q 019006 138 MAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGA-IQTF-PDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRK 215 (347)
Q Consensus 138 ~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~-~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 215 (347)
+..|...+.++.+. +.++++|+.|+.+++||.+.... +..+ .+...+..+.+++++..+++++.|+.+++||..+
T Consensus 185 ~~~h~~~v~~~s~~---~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~ 261 (420)
T 4gga_A 185 MTSHSARVGSLSWN---SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAP 261 (420)
T ss_dssp ECCCSSCEEEEEEE---TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSC
T ss_pred EeCCCCceEEEeeC---CCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeecc
Confidence 99999888877664 35899999999999999886443 3333 4567899999999999999999999999999987
Q ss_pred Cc----eEEEecCCCCceeEEEECCCCC-EEEE--EcCCCcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCC
Q 019006 216 GE----VSMTLQGHQDMITGMSLSPDGS-YLLT--NGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDG 288 (347)
Q Consensus 216 ~~----~~~~~~~~~~~i~~v~~~~~~~-~l~t--~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g 288 (347)
++ .......|...|.+++|+|.+. .+++ |+.|+.|++||++. ..+...+..+ ..+.++.|+|++
T Consensus 262 ~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t----~~~~~~~~~~-----~~v~~~~~~~~~ 332 (420)
T 4gga_A 262 GEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCS----GACLSAVDAH-----SQVCSILWSPHY 332 (420)
T ss_dssp CSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTT----TEEEEEEECS-----SCEEEEEEETTT
T ss_pred ccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCc----cccceeeccc-----cceeeeeecCCC
Confidence 64 3456677889999999999765 4444 45799999999974 3444444433 457889999999
Q ss_pred CEEEEee--CCCeEEEEeCCCceeeEEecCCccCeeeEEEcCCCCEEEEecCCCcEEeecC
Q 019006 289 SKVTAGS--SDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGEI 347 (347)
Q Consensus 289 ~~l~sgs--~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~i~~~ 347 (347)
..|++++ .||.|++||+.+++++.++.+|.+.|++++|+|++++|+|+|.|++|+|||+
T Consensus 333 ~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv 393 (420)
T 4gga_A 333 KELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRC 393 (420)
T ss_dssp TEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECC
T ss_pred CeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEEC
Confidence 9988765 7999999999999999999999999999999999999999999999999986
No 46
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=9.3e-41 Score=289.56 Aligned_cols=251 Identities=23% Similarity=0.414 Sum_probs=202.4
Q ss_pred EecCccccEEEEEECCCCCeEEEeeCCCcEEEEeccCCC-eeeEEEeCcccceeEEEEcC--CCCEEEEecCCCeEEEEE
Q 019006 52 LLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDC-KNFMVLKGHKNAILDLHWTT--DGSQIISASPDKTLRAWD 128 (347)
Q Consensus 52 ~~~~h~~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~-~~~~~~~~h~~~v~~~~~~~--~~~~l~s~~~dg~i~iwd 128 (347)
.+.+|.+.|++++|+|+|++||+|+.|++|++|++.... .....+.+|...|.+++|++ ++++|++|+.|++|++||
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd 87 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWR 87 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEEC
T ss_pred ecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEE
Confidence 467999999999999999999999999999999996432 24567899999999999986 488999999999999999
Q ss_pred CCCCc--eeeeeeccCcceeEeecCCCC-CCEEEEEcCCCceEEEeCCCCCce---eec-CCCCceEEEEEcCC------
Q 019006 129 VETGK--QIKKMAEHNSFVNSCCPSRRG-PPLVVSGSDDGTAKLWDMRQRGAI---QTF-PDKYQITAVSFSDA------ 195 (347)
Q Consensus 129 ~~~~~--~~~~~~~~~~~v~~~~~~~~~-~~~~~s~~~d~~i~iwd~~~~~~~---~~~-~~~~~v~~~~~~~~------ 195 (347)
+.+++ ....+..|...|.++++++.. ..++++|+.|++|++||++.+... ..+ .+...+.+++|+|+
T Consensus 88 ~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~ 167 (316)
T 3bg1_A 88 EENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSL 167 (316)
T ss_dssp CSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC---
T ss_pred CCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccc
Confidence 98763 456677888999999998863 468999999999999999865422 222 34567889999987
Q ss_pred -----------CCeEEEEecCCcEEEEeCCCC---ceEEEecCCCCceeEEEECCCC----CEEEEEcCCCcEEEEeCCC
Q 019006 196 -----------SDKIYTGGIDNDVKVWDLRKG---EVSMTLQGHQDMITGMSLSPDG----SYLLTNGMDCKLCIWDMRP 257 (347)
Q Consensus 196 -----------~~~l~~~~~dg~i~iwd~~~~---~~~~~~~~~~~~i~~v~~~~~~----~~l~t~~~d~~i~~wd~~~ 257 (347)
+.+|++|+.|+.|++||++.. +....+.+|...|.+++|+|++ ++|++++.|++|++||+..
T Consensus 168 ~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~ 247 (316)
T 3bg1_A 168 IDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDD 247 (316)
T ss_dssp ---CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSS
T ss_pred cccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccC
Confidence 368999999999999999755 4566788999999999999986 8899999999999999875
Q ss_pred CCCcCceeEEEeccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCC
Q 019006 258 YAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTT 306 (347)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~ 306 (347)
..........+..| ...+.+++|+|+|++|++|+.||.|++|+..
T Consensus 248 ~~~~~~~~~~~~~~----~~~v~~v~~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 248 ASSNTWSPKLLHKF----NDVVWHVSWSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp TTCCCCBCCEEEEC----SSCEEEEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred ccccchhhhhhhcC----CCcEEEEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence 32111111223333 4679999999999999999999999999975
No 47
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-41 Score=312.37 Aligned_cols=287 Identities=13% Similarity=0.115 Sum_probs=218.4
Q ss_pred EecCccccEEEEEECCC------CCeEEEeeCCCcEEEEeccCCC----------eeeEEEeCcccceeEEEEcCCCCEE
Q 019006 52 LLTGHQSAVYTMKFNPA------GTVIASGSHDRDIFLWHVHGDC----------KNFMVLKGHKNAILDLHWTTDGSQI 115 (347)
Q Consensus 52 ~~~~h~~~V~~v~~~~~------~~~l~s~~~d~~v~~w~~~~~~----------~~~~~~~~h~~~v~~~~~~~~~~~l 115 (347)
.+.+|.+.|.+|+|+|+ +.+||+|+.||+|++|++.... .+...+.+|...|++++|+++ ..|
T Consensus 202 ~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~-~~l 280 (524)
T 2j04_B 202 TIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP-TTV 280 (524)
T ss_dssp EEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS-SEE
T ss_pred EEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC-CeE
Confidence 45678899999999997 5799999999999999986432 122467899999999999986 489
Q ss_pred EEecCCCeEEEEECCCCc-eeeeeeccCcceeEee--cCCCCCCEEEEEcCCCceEEEeCCCCCceeecCC---CCceEE
Q 019006 116 ISASPDKTLRAWDVETGK-QIKKMAEHNSFVNSCC--PSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPD---KYQITA 189 (347)
Q Consensus 116 ~s~~~dg~i~iwd~~~~~-~~~~~~~~~~~v~~~~--~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~~---~~~v~~ 189 (347)
++|+.||+|++||+.++. ....+..|...|.+++ +.+.+..++++|+.|++|++||+++.+....+.. ...+.+
T Consensus 281 asgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~ 360 (524)
T 2j04_B 281 VCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVP 360 (524)
T ss_dssp EEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCC
T ss_pred EEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccc
Confidence 999999999999998764 3445778999999883 4443337899999999999999987665444322 124788
Q ss_pred EEEcCCCCeEEEEecCCcEEEEeCCCCceEEEecCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEe
Q 019006 190 VSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILE 269 (347)
Q Consensus 190 ~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~ 269 (347)
++|+|++..+++++.|++|++||++++.+...+.+|...|++++|+|++++|++|+.|++|++||+... .....+
T Consensus 361 v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~-----~~~~~~ 435 (524)
T 2j04_B 361 VVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAARR-----LLHGIK 435 (524)
T ss_dssp EEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSS-----TTTCC-
T ss_pred eEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechHh-----hccccc
Confidence 999999999999999999999999999888888899999999999999999999999999999997532 111111
Q ss_pred ccc-cccccceEEEEECCCCCEEEEeeCCCeEEEEeCC-CceeeEEecCCccCeeeEEEcCCCC---EEEEecCCCcEEe
Q 019006 270 GHQ-HNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTT-SRRILYKLPGHTGSVNESVFHATEP---VIGSCSSDKQIYL 344 (347)
Q Consensus 270 ~~~-~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~-~~~~~~~~~~h~~~v~~~~~~~~~~---~l~s~s~D~~i~i 344 (347)
.+. ......+++++|+|+|+.+. ...+ +++|+.. ++.++..+.+|...|++|+|+|+++ ++|+++.||.|+|
T Consensus 436 ~~~~~~~~~~v~~v~~sp~g~~~~-~~~~--~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vrl 512 (524)
T 2j04_B 436 NSSATQKSLRLWKWDYSIKDDKYR-IDSS--YEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFSNSAGLLTL 512 (524)
T ss_dssp -----CCCCEEEECBCCSSSCEEE-ECCC--CCCCC-------------CCCSCCCEEECCSTTTTTEEEEECTTSEEEE
T ss_pred cCccceeeeEEEEeccCCCCCeEE-ccCC--ceecccccCCcceeeecCCCceEEEEECCCCCCccHHHHhhccCceEEE
Confidence 000 00112467899999998553 2222 3344433 4667778999999999999999965 9999999999999
Q ss_pred ecC
Q 019006 345 GEI 347 (347)
Q Consensus 345 ~~~ 347 (347)
|++
T Consensus 513 w~l 515 (524)
T 2j04_B 513 EYL 515 (524)
T ss_dssp EEC
T ss_pred EEc
Confidence 985
No 48
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=6.5e-40 Score=297.25 Aligned_cols=284 Identities=19% Similarity=0.406 Sum_probs=227.1
Q ss_pred CccccEEEEEECCCCCeEEEeeCCCcEEEEeccCCC----------eeeEEEeCcc------------cceeEEEEcCCC
Q 019006 55 GHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDC----------KNFMVLKGHK------------NAILDLHWTTDG 112 (347)
Q Consensus 55 ~h~~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~----------~~~~~~~~h~------------~~v~~~~~~~~~ 112 (347)
.|.+.|++++|+|+|++||+|+.||.|++|++.... .....+.+|. ..|.+++|+|++
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~ 105 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK 105 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence 468899999999999999999999999999986432 1356788998 889999999998
Q ss_pred --CEEEEecCCCeEEEEECCCCcee---------------------------------------ee-eeccCcceeEeec
Q 019006 113 --SQIISASPDKTLRAWDVETGKQI---------------------------------------KK-MAEHNSFVNSCCP 150 (347)
Q Consensus 113 --~~l~s~~~dg~i~iwd~~~~~~~---------------------------------------~~-~~~~~~~v~~~~~ 150 (347)
.+|++++.|++|++||+.+++.. .. ...|...|.++++
T Consensus 106 ~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 185 (447)
T 3dw8_B 106 NAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISI 185 (447)
T ss_dssp SSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEE
T ss_pred CcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEE
Confidence 79999999999999998764331 11 2467888999999
Q ss_pred CCCCCCEEEEEcCCCceEEEeCCC-CCceee-------c-CCCCceEEEEEcCCC-CeEEEEecCCcEEEEeCCCCce--
Q 019006 151 SRRGPPLVVSGSDDGTAKLWDMRQ-RGAIQT-------F-PDKYQITAVSFSDAS-DKIYTGGIDNDVKVWDLRKGEV-- 218 (347)
Q Consensus 151 ~~~~~~~~~s~~~d~~i~iwd~~~-~~~~~~-------~-~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~-- 218 (347)
++++ .++++| .|++|++||++. +..+.. + .+...|.+++|+|++ ..+++|+.||.|++||+++++.
T Consensus 186 ~~~~-~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~ 263 (447)
T 3dw8_B 186 NSDY-ETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCD 263 (447)
T ss_dssp CTTS-SEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSC
T ss_pred cCCC-CEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCcccc
Confidence 8865 578888 799999999983 333332 1 456679999999998 8999999999999999998876
Q ss_pred --EEEecCCCC------------ceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEeccccccc--------
Q 019006 219 --SMTLQGHQD------------MITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFE-------- 276 (347)
Q Consensus 219 --~~~~~~~~~------------~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~-------- 276 (347)
...+.+|.. .|.+++|+|++++|++++. +.|++||++.. ..++..+..|.....
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~---~~~~~~~~~~~~~~~~l~~~~~~ 339 (447)
T 3dw8_B 264 RHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNME---NRPVETYQVHEYLRSKLCSLYEN 339 (447)
T ss_dssp TTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCC---SSCSCCEESCGGGTTTHHHHHHT
T ss_pred ceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCC---ccccceeeccccccccccccccc
Confidence 677888876 8999999999999999998 99999999741 234445555532111
Q ss_pred ---cceEEEEECCCCCEEEEeeCCCeEEEEeCCCceeeEEecC---------------------------------CccC
Q 019006 277 ---KNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPG---------------------------------HTGS 320 (347)
Q Consensus 277 ---~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~~~~~~---------------------------------h~~~ 320 (347)
..+..++|+|++++|++|+.||.|++||+.+++.+ .+.+ +...
T Consensus 340 ~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (447)
T 3dw8_B 340 DCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDI-TLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKK 418 (447)
T ss_dssp SGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEE-EEECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSC
T ss_pred cccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcce-eeeecccccccccccCCccccccCCcccccccccccccCCc
Confidence 01345899999999999999999999999988765 3332 3456
Q ss_pred eeeEEEcCCCCEEEEecCCCcEEeec
Q 019006 321 VNESVFHATEPVIGSCSSDKQIYLGE 346 (347)
Q Consensus 321 v~~~~~~~~~~~l~s~s~D~~i~i~~ 346 (347)
|..++|||++.+||+++.|+ +++|.
T Consensus 419 i~~~~~~p~~~~la~~~~~~-~~~~~ 443 (447)
T 3dw8_B 419 ILHTAWHPKENIIAVATTNN-LYIFQ 443 (447)
T ss_dssp CCEEEECSSSSEEEEECSSC-EEEEE
T ss_pred eeEEEECCCCCEEEEEecce-eeeec
Confidence 88999999999999999886 66653
No 49
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=4.8e-39 Score=278.25 Aligned_cols=274 Identities=20% Similarity=0.385 Sum_probs=225.7
Q ss_pred EEEEEECCCCCeEEEeeCCCcEEEEeccCC-CeeeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEECCCCceeeee
Q 019006 60 VYTMKFNPAGTVIASGSHDRDIFLWHVHGD-CKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKM 138 (347)
Q Consensus 60 V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 138 (347)
.+.|+||+++ +||+| .|++|++||.... ......+.+|...|.+++|+|++++|++|+.||+|++||+.+++.+..+
T Consensus 28 ~~~l~WS~~~-~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~ 105 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNM 105 (318)
T ss_dssp CBCEEECTTS-EEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred ceEEEECCCC-EEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEe
Confidence 5679999876 77766 4999999998643 2223345678889999999999999999999999999999999999999
Q ss_pred eccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCce-ee-cCCCCceEEEEEcCCCCeEEEEecCCcEEEEeCCCC
Q 019006 139 AEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAI-QT-FPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKG 216 (347)
Q Consensus 139 ~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~-~~-~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 216 (347)
..|...+..+... +.++++++.++.+++|+....... .. ..+...+..+.+.++++.+++++.|+.|++||++++
T Consensus 106 ~~h~~~~~~~~~~---~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~ 182 (318)
T 4ggc_A 106 TSHSARVGSLSWN---SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPG 182 (318)
T ss_dssp ECCSSCEEEEEEE---TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCB
T ss_pred cCccceEEEeecC---CCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCC
Confidence 9898877766553 358999999999999998765433 33 345678999999999999999999999999999876
Q ss_pred ce----EEEecCCCCceeEEEECCCCCEE---EEEcCCCcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCC
Q 019006 217 EV----SMTLQGHQDMITGMSLSPDGSYL---LTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGS 289 (347)
Q Consensus 217 ~~----~~~~~~~~~~i~~v~~~~~~~~l---~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~ 289 (347)
+. ......|...|.++.++|++..+ ++++.++.|++||.+... ...... ....+..+.|+|++.
T Consensus 183 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~----~~~~~~-----~~~~v~~~~~~~~~~ 253 (318)
T 4ggc_A 183 EGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGA----CLSAVD-----AHSQVCSILWSPHYK 253 (318)
T ss_dssp TTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCC----EEEEEE-----CSSCEEEEEEETTTT
T ss_pred cccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccc----cccccc-----ceeeeeeeeeccccc
Confidence 53 34456677889999999976643 466788999999987432 222222 134678889999999
Q ss_pred EEEEee--CCCeEEEEeCCCceeeEEecCCccCeeeEEEcCCCCEEEEecCCCcEEeecC
Q 019006 290 KVTAGS--SDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGEI 347 (347)
Q Consensus 290 ~l~sgs--~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~i~~~ 347 (347)
.+++++ .|+.|++||+.+++++.++.+|.+.|++++|+|++++|+|+|.||+|+|||+
T Consensus 254 ~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~ 313 (318)
T 4ggc_A 254 ELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRC 313 (318)
T ss_dssp EEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECC
T ss_pred ceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEEC
Confidence 887654 7999999999999999999999999999999999999999999999999996
No 50
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=9.1e-40 Score=280.87 Aligned_cols=250 Identities=20% Similarity=0.299 Sum_probs=208.8
Q ss_pred EEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEECCCC--ceeeeeeccCcceeEeecCCC-CCCEEEEEcCCCceEEE
Q 019006 94 MVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETG--KQIKKMAEHNSFVNSCCPSRR-GPPLVVSGSDDGTAKLW 170 (347)
Q Consensus 94 ~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~--~~~~~~~~~~~~v~~~~~~~~-~~~~~~s~~~d~~i~iw 170 (347)
..+.+|...|.+++|+|+|++|++|+.|++|++||+... +.+..+..|...|.++++.++ ...+|++|+.|++|++|
T Consensus 3 ~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iW 82 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIW 82 (297)
T ss_dssp EECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEE
T ss_pred eeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEE
Confidence 456799999999999999999999999999999999743 567788899999999998754 35789999999999999
Q ss_pred eCCCCC--ceeec-CCCCceEEEEEcCC--CCeEEEEecCCcEEEEeCCCCc--eEEEecCCCCceeEEEECCC------
Q 019006 171 DMRQRG--AIQTF-PDKYQITAVSFSDA--SDKIYTGGIDNDVKVWDLRKGE--VSMTLQGHQDMITGMSLSPD------ 237 (347)
Q Consensus 171 d~~~~~--~~~~~-~~~~~v~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~~~~~i~~v~~~~~------ 237 (347)
|++++. .+..+ .+...|.+++|+|+ +..|++++.|+.|++||++.+. ....+.+|...|.+++|+|+
T Consensus 83 d~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~ 162 (297)
T 2pm7_B 83 KEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDG 162 (297)
T ss_dssp EBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC-----
T ss_pred EcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccc
Confidence 998763 33333 35678999999997 7899999999999999998763 24567889999999999997
Q ss_pred -------CCEEEEEcCCCcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCC---CEEEEeeCCCeEEEEeCCC
Q 019006 238 -------GSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDG---SKVTAGSSDRMVYIWDTTS 307 (347)
Q Consensus 238 -------~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g---~~l~sgs~dg~i~vwd~~~ 307 (347)
+++|++++.|+.|++||++...........+.+|. ..|.+++|+|++ .+|++|+.|+.|++||+..
T Consensus 163 ~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~----~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~ 238 (297)
T 2pm7_B 163 EHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHS----DWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDN 238 (297)
T ss_dssp -------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCS----SCEEEEEECCCCSSSEEEEEEETTSCEEEEEESS
T ss_pred cCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCC----CceEEEEECCCCCCceEEEEEECCCcEEEEEeCC
Confidence 57999999999999999975432223445566653 579999999995 8999999999999999876
Q ss_pred ce---eeEEe--cCCccCeeeEEEcCCCCEEEEecCCCcEEeecC
Q 019006 308 RR---ILYKL--PGHTGSVNESVFHATEPVIGSCSSDKQIYLGEI 347 (347)
Q Consensus 308 ~~---~~~~~--~~h~~~v~~~~~~~~~~~l~s~s~D~~i~i~~~ 347 (347)
.. ....+ .+|...|..++|+|++++||+++.|++|+||+.
T Consensus 239 ~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~ 283 (297)
T 2pm7_B 239 EQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKE 283 (297)
T ss_dssp TTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEE
T ss_pred CCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEE
Confidence 43 11223 578899999999999999999999999999973
No 51
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1.1e-39 Score=283.14 Aligned_cols=252 Identities=23% Similarity=0.456 Sum_probs=213.2
Q ss_pred CeeEecCccccEEEEEECCCCCeEEEeeCCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEE
Q 019006 49 PIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWD 128 (347)
Q Consensus 49 ~~~~~~~h~~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd 128 (347)
++..+.+|...|.+++|+|++++|++|+.|++|++||+.. .+....+.+|...|.+++|+|++.+|++++.|++|++||
T Consensus 57 ~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~-~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd 135 (319)
T 3frx_A 57 PVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVAT-GETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWT 135 (319)
T ss_dssp EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT-TEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEE
T ss_pred cceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCC-CCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEE
Confidence 4567899999999999999999999999999999999964 456677899999999999999999999999999999999
Q ss_pred CCCCceeeeeeccCcceeEeecCCCC-----CCEEEEEcCCCceEEEeCCCCCceeec-CCCCceEEEEEcCCCCeEEEE
Q 019006 129 VETGKQIKKMAEHNSFVNSCCPSRRG-----PPLVVSGSDDGTAKLWDMRQRGAIQTF-PDKYQITAVSFSDASDKIYTG 202 (347)
Q Consensus 129 ~~~~~~~~~~~~~~~~v~~~~~~~~~-----~~~~~s~~~d~~i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~ 202 (347)
+. ++.+..+..|...+..+.+.+.. ..++++++.|++|++||+++......+ .+...|.+++|+|++.+|+++
T Consensus 136 ~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~ 214 (319)
T 3frx_A 136 IK-GQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASA 214 (319)
T ss_dssp TT-SCEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEE
T ss_pred CC-CCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEE
Confidence 86 45667788888888888877642 347999999999999999987766655 456789999999999999999
Q ss_pred ecCCcEEEEeCCCCceEEEecCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEecc----ccccccc
Q 019006 203 GIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGH----QHNFEKN 278 (347)
Q Consensus 203 ~~dg~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~----~~~~~~~ 278 (347)
+.||.|++||+++++....+..+ ..|.+++|+|++.++++++.+ .+++|++... .....+..+ .......
T Consensus 215 ~~dg~i~iwd~~~~~~~~~~~~~-~~v~~~~~sp~~~~la~~~~~-~i~v~~~~~~----~~~~~~~~~~~~~~~~~~~~ 288 (319)
T 3frx_A 215 GKDGEIMLWNLAAKKAMYTLSAQ-DEVFSLAFSPNRYWLAAATAT-GIKVFSLDPQ----YLVDDLRPEFAGYSKAAEPH 288 (319)
T ss_dssp ETTCEEEEEETTTTEEEEEEECC-SCEEEEEECSSSSEEEEEETT-EEEEEEETTE----EEEEEECCCCTTCCGGGCCC
T ss_pred eCCCeEEEEECCCCcEEEEecCC-CcEEEEEEcCCCCEEEEEcCC-CcEEEEeCcC----eeeeccCccccccccCcCcc
Confidence 99999999999999888888764 579999999999999888755 5999998642 223333222 1122456
Q ss_pred eEEEEECCCCCEEEEeeCCCeEEEEeCCCc
Q 019006 279 LLKCGWSPDGSKVTAGSSDRMVYIWDTTSR 308 (347)
Q Consensus 279 ~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~ 308 (347)
+.+++|+|||++|++|+.||.|++||+.++
T Consensus 289 v~~~~~spdg~~l~sg~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 289 AVSLAWSADGQTLFAGYTDNVIRVWQVMTA 318 (319)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEEEEEC
T ss_pred eeEEEECCCCCEEEEeecCceEEEEEEeec
Confidence 889999999999999999999999998654
No 52
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=9.5e-40 Score=287.93 Aligned_cols=248 Identities=21% Similarity=0.333 Sum_probs=207.1
Q ss_pred EecCccccEEEEEECCCCCeEEEeeCCCcEEEEeccCCCe---eeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEE
Q 019006 52 LLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCK---NFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWD 128 (347)
Q Consensus 52 ~~~~h~~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~---~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd 128 (347)
...+|...|.+++|+|++.+| +++.||+|++||+..... ......+|...|.+++|+|++++|++++.|++|++||
T Consensus 89 ~~~~~~~~V~~~~~s~d~~~l-~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd 167 (357)
T 4g56_B 89 AGVQTEAGVTDVAWVSEKGIL-VASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWD 167 (357)
T ss_dssp EEEECSSCEEEEEEETTTEEE-EEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEE
T ss_pred ccCCCCCCEEEEEEcCCCCEE-EEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEE
Confidence 445799999999999998654 678899999999854321 1234568999999999999999999999999999999
Q ss_pred CCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeecC---CCCceEEEEEcCCC-CeEEEEec
Q 019006 129 VETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFP---DKYQITAVSFSDAS-DKIYTGGI 204 (347)
Q Consensus 129 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~---~~~~v~~~~~~~~~-~~l~~~~~ 204 (347)
+.+++.+..+..|...+..+++++.+..++++++.|++|++||+++++....+. +...+.+++|+|++ .++++|+.
T Consensus 168 ~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~ 247 (357)
T 4g56_B 168 LSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDE 247 (357)
T ss_dssp TTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEES
T ss_pred CCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeec
Confidence 999999999999999999999988877789999999999999999887665543 44579999999985 57888999
Q ss_pred CCcEEEEeCCCCceEEEecCCCCceeEEEECCCC-CEEEEEcCCCcEEEEeCCCCCCcCceeEEEeccccccccceEEEE
Q 019006 205 DNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDG-SYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCG 283 (347)
Q Consensus 205 dg~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~-~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (347)
|+.|++||+++++....+.+|...|++++|+|++ ++|++++.|++|++||++. .+++..+ +| ...|.+++
T Consensus 248 d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~----~~~~~~~-~H----~~~V~~va 318 (357)
T 4g56_B 248 TGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADF----SEVFRDL-SH----RDFVTGVA 318 (357)
T ss_dssp SSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTS----CEEEEEC-CC----SSCEEEEE
T ss_pred ccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCC----CcEeEEC-CC----CCCEEEEE
Confidence 9999999999999999999999999999999987 5799999999999999874 2333332 33 46799999
Q ss_pred ECC-CCCEEEEeeCCCeEEEEeCCCce
Q 019006 284 WSP-DGSKVTAGSSDRMVYIWDTTSRR 309 (347)
Q Consensus 284 ~s~-~g~~l~sgs~dg~i~vwd~~~~~ 309 (347)
|+| ++.+|++|+.||.|++|++.+..
T Consensus 319 fsP~d~~~l~s~s~Dg~v~iW~~~~~~ 345 (357)
T 4g56_B 319 WSPLDHSKFTTVGWDHKVLHHHLPSEG 345 (357)
T ss_dssp ECSSSTTEEEEEETTSCEEEEECC---
T ss_pred EeCCCCCEEEEEcCCCeEEEEECCCCC
Confidence 998 79999999999999999987643
No 53
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=4.9e-39 Score=325.81 Aligned_cols=293 Identities=25% Similarity=0.390 Sum_probs=243.9
Q ss_pred eeEecCccccEEEEEECCCCCeEEEeeCCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEEC
Q 019006 50 IMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDV 129 (347)
Q Consensus 50 ~~~~~~h~~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~ 129 (347)
...+.+|.+.|++++|+|+|++||+|+.||+|++|+... ......+.+|...|.+++|+|++++|++++.||.|++||+
T Consensus 608 ~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~-~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~ 686 (1249)
T 3sfz_A 608 RLVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAET-GEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDS 686 (1249)
T ss_dssp SEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-CCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred eEEEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCC-CCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEEC
Confidence 356789999999999999999999999999999999964 4556778899999999999999999999999999999999
Q ss_pred CCCceeeeeeccCcceeEeecCCC-CCCEEEEEcCCCceEEEeCCCCCceeecC-CCCceEEEEEcCCCCeEEEEecCCc
Q 019006 130 ETGKQIKKMAEHNSFVNSCCPSRR-GPPLVVSGSDDGTAKLWDMRQRGAIQTFP-DKYQITAVSFSDASDKIYTGGIDND 207 (347)
Q Consensus 130 ~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~s~~~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~ 207 (347)
.+++.+..+..|...+..+.+.+. +..++++|+.|+.|++||++++..+..+. +...|.+++|+|+++.+++++.||.
T Consensus 687 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~ 766 (1249)
T 3sfz_A 687 ATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGT 766 (1249)
T ss_dssp TTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSE
T ss_pred CCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCe
Confidence 999999999999999999998875 34588999999999999999988877664 5678999999999999999999999
Q ss_pred EEEEeCCCCceEEEe-------------------------------------------------------cCCCCceeEE
Q 019006 208 VKVWDLRKGEVSMTL-------------------------------------------------------QGHQDMITGM 232 (347)
Q Consensus 208 i~iwd~~~~~~~~~~-------------------------------------------------------~~~~~~i~~v 232 (347)
|++||+++++....+ .+|...|.++
T Consensus 767 v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~ 846 (1249)
T 3sfz_A 767 LRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYC 846 (1249)
T ss_dssp EEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEE
T ss_pred EEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEE
Confidence 999998766433221 2677789999
Q ss_pred EECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEeccccc--------------------------------------
Q 019006 233 SLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHN-------------------------------------- 274 (347)
Q Consensus 233 ~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~-------------------------------------- 274 (347)
+|+|+++++++++.|+.|++||+... .....+.+|...
T Consensus 847 ~~sp~~~~l~~~~~dg~v~vwd~~~~----~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~ 922 (1249)
T 3sfz_A 847 DFSPYDHLAVIALSQYCVELWNIDSR----LKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVL 922 (1249)
T ss_dssp EECSSTTEEEEECSSSCEEEEETTTT----EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSE
T ss_pred EEcCCCCEEEEEeCCCeEEEEEcCCC----ceeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecc
Confidence 99999999999999999999998742 222223222110
Q ss_pred -------------------------------------cccceEEEEECCCCCEEEEeeCCCeEEEEeCCCceeeEEecCC
Q 019006 275 -------------------------------------FEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGH 317 (347)
Q Consensus 275 -------------------------------------~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~~~~~~h 317 (347)
....+.+++|+|+++++++|+.||.|++||+.+++.+..+.+|
T Consensus 923 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h 1002 (1249)
T 3sfz_A 923 KQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGH 1002 (1249)
T ss_dssp EEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCC
T ss_pred cceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccC
Confidence 0112445566666666666666666666666777777888899
Q ss_pred ccCeeeEEEcCCCCEEEEecCCCcEEeecC
Q 019006 318 TGSVNESVFHATEPVIGSCSSDKQIYLGEI 347 (347)
Q Consensus 318 ~~~v~~~~~~~~~~~l~s~s~D~~i~i~~~ 347 (347)
...|.+++|+|++++|++++.||.|++||+
T Consensus 1003 ~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~ 1032 (1249)
T 3sfz_A 1003 KKAVRHIQFTADGKTLISSSEDSVIQVWNW 1032 (1249)
T ss_dssp SSCCCCEEECSSSSCEEEECSSSBEEEEET
T ss_pred CCceEEEEECCCCCEEEEEcCCCEEEEEEC
Confidence 999999999999999999999999999985
No 54
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=6.3e-39 Score=280.90 Aligned_cols=246 Identities=22% Similarity=0.445 Sum_probs=216.2
Q ss_pred eeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEECCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEe
Q 019006 92 NFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWD 171 (347)
Q Consensus 92 ~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd 171 (347)
....+.+|...|.+++|+|++++|++++.||+|++||+.+++.+..+..|...+..+++++.+ .++++|+.|+.+++||
T Consensus 47 ~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~s~~~d~~v~iw~ 125 (340)
T 1got_B 47 TRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSG-NYVACGGLDNICSIYN 125 (340)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTS-SEEEEEETTCEEEEEE
T ss_pred hheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCC-CEEEEEeCCCeEEEEE
Confidence 345788999999999999999999999999999999999999998898999999999998875 5889999999999999
Q ss_pred CCCCCc----eeec-CCCCceEEEEEcCCCCeEEEEecCCcEEEEeCCCCceEEEecCCCCceeEEEECCCCCEEEEEcC
Q 019006 172 MRQRGA----IQTF-PDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGM 246 (347)
Q Consensus 172 ~~~~~~----~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~~ 246 (347)
+.+... ...+ .+...+.++.|++++ .+++++.|+.|++||+++++....+.+|...|.+++|+|+++++++++.
T Consensus 126 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~ 204 (340)
T 1got_B 126 LKTREGNVRVSRELAGHTGYLSCCRFLDDN-QIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGAC 204 (340)
T ss_dssp TTTCSBSCEEEEEEECCSSCEEEEEEEETT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred CccCCCcceeEEEecCCCccEEEEEECCCC-cEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeC
Confidence 986532 2222 456689999998765 5899999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCCceeeEEec--CCccCeeeE
Q 019006 247 DCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLP--GHTGSVNES 324 (347)
Q Consensus 247 d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~~~~~--~h~~~v~~~ 324 (347)
|+.|++||++. ..+...+.+|. ..+.+++|+|++++|++|+.||.|++||+.+++.+..+. .+...|..+
T Consensus 205 d~~v~~wd~~~----~~~~~~~~~h~----~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~ 276 (340)
T 1got_B 205 DASAKLWDVRE----GMCRQTFTGHE----SDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSV 276 (340)
T ss_dssp TSCEEEEETTT----CSEEEEECCCS----SCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEE
T ss_pred CCcEEEEECCC----CeeEEEEcCCc----CCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEE
Confidence 99999999974 34556666653 578999999999999999999999999999988776664 334579999
Q ss_pred EEcCCCCEEEEecCCCcEEeecC
Q 019006 325 VFHATEPVIGSCSSDKQIYLGEI 347 (347)
Q Consensus 325 ~~~~~~~~l~s~s~D~~i~i~~~ 347 (347)
+|+|++++|++++.|+.|++||+
T Consensus 277 ~~s~~g~~l~~g~~d~~i~vwd~ 299 (340)
T 1got_B 277 SFSKSGRLLLAGYDDFNCNVWDA 299 (340)
T ss_dssp EECTTSSEEEEEETTSEEEEEET
T ss_pred EECCCCCEEEEECCCCeEEEEEc
Confidence 99999999999999999999985
No 55
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=1.1e-39 Score=284.95 Aligned_cols=289 Identities=18% Similarity=0.271 Sum_probs=221.8
Q ss_pred eEecCccccEEEEEECCCCCeEEEeeCCCcEEEEeccCCC---eeeEEEeCcccceeEEEEcC--CCCEEEEecCCCeEE
Q 019006 51 MLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDC---KNFMVLKGHKNAILDLHWTT--DGSQIISASPDKTLR 125 (347)
Q Consensus 51 ~~~~~h~~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~---~~~~~~~~h~~~v~~~~~~~--~~~~l~s~~~dg~i~ 125 (347)
..+.+|.+.|++++|+|++++||+|+.||.|++|++.... .....+.+|...|.+++|+| ++++|++++.||.|+
T Consensus 5 ~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~ 84 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVK 84 (351)
T ss_dssp CEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEE
T ss_pred ccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEE
Confidence 3678999999999999999999999999999999996432 34556789999999999999 699999999999999
Q ss_pred EEECCCC---------ceeeeeeccCcceeEeecCCCC-CCEEEEEcCCCceEEEeCCCCCceeec--------------
Q 019006 126 AWDVETG---------KQIKKMAEHNSFVNSCCPSRRG-PPLVVSGSDDGTAKLWDMRQRGAIQTF-------------- 181 (347)
Q Consensus 126 iwd~~~~---------~~~~~~~~~~~~v~~~~~~~~~-~~~~~s~~~d~~i~iwd~~~~~~~~~~-------------- 181 (347)
+||+.++ +.+..+..|...+..+++.+.. ..++++++.|+.|++||++++..+..+
T Consensus 85 vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 164 (351)
T 3f3f_A 85 LWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPA 164 (351)
T ss_dssp EEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCS
T ss_pred EEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccC
Confidence 9999876 4466777888999999998763 468899999999999999877654332
Q ss_pred CCCCceEEEEEcCC---CCeEEEEecCCcEEEEeCCCCce--EEEecCCCCceeEEEECCCC----CEEEEEcCCCcEEE
Q 019006 182 PDKYQITAVSFSDA---SDKIYTGGIDNDVKVWDLRKGEV--SMTLQGHQDMITGMSLSPDG----SYLLTNGMDCKLCI 252 (347)
Q Consensus 182 ~~~~~v~~~~~~~~---~~~l~~~~~dg~i~iwd~~~~~~--~~~~~~~~~~i~~v~~~~~~----~~l~t~~~d~~i~~ 252 (347)
.+...+.++.|+|+ +..+++++.++.+.+|+...++. ...+.+|...|++++|+|++ ++|++++.||.|++
T Consensus 165 ~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~i 244 (351)
T 3f3f_A 165 NHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRI 244 (351)
T ss_dssp SCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEE
T ss_pred CcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEE
Confidence 24457899999997 88999999999998888877764 66788899999999999998 89999999999999
Q ss_pred EeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEEEEe----eCCCeEEEEeCCCceeeEEecCCccCeeeEEEcC
Q 019006 253 WDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAG----SSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHA 328 (347)
Q Consensus 253 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sg----s~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~ 328 (347)
||++....... .... .........++....++.+ .....+.+|+....+.+..+.+|...|++++|+|
T Consensus 245 wd~~~~~~~~~----~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~ 316 (351)
T 3f3f_A 245 FKITEKLSPLA----SEES----LTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNL 316 (351)
T ss_dssp EEEEECC-----------------------------------------------CCSEEEEEEEEECTTSSCEEEEEECS
T ss_pred EeCCCCcCccc----cCCc----ccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcC
Confidence 99975322111 1100 1112222233333333333 3456677888888888999999999999999999
Q ss_pred CCCEEEEecCCCcEEeecC
Q 019006 329 TEPVIGSCSSDKQIYLGEI 347 (347)
Q Consensus 329 ~~~~l~s~s~D~~i~i~~~ 347 (347)
++++|++++.||.|++||+
T Consensus 317 ~~~~l~s~~~dg~v~iw~~ 335 (351)
T 3f3f_A 317 TGTILSSAGDDGKVRLWKA 335 (351)
T ss_dssp SSCCEEEEETTSCEEEEEE
T ss_pred CCCEEEEecCCCcEEEEec
Confidence 9999999999999999985
No 56
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=2.8e-39 Score=281.75 Aligned_cols=280 Identities=17% Similarity=0.295 Sum_probs=237.4
Q ss_pred CccccEEEEEECCCCCeEEEeeCCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEECCCCce
Q 019006 55 GHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQ 134 (347)
Q Consensus 55 ~h~~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~ 134 (347)
-|.+.|.+++|+|+|+.++++..++.+..|..... .......+|...|.+++|+|++++|++++ ||.|++||+.+++.
T Consensus 7 ~~~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~ 84 (337)
T 1gxr_A 7 MGSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRH-ARQINTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGN 84 (337)
T ss_dssp EEEEECCEEEECSSSCEEECCCCTTSSSSTTCCSE-EEEEEEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTC
T ss_pred ccCCceeEEEECCCCCEEEeecCCCcEeccccCCc-cccceeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCc
Confidence 35678999999999999999988887777755432 23334558999999999999999999999 99999999987653
Q ss_pred eee---ee--ccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCC--ceeec-CCCCceEEEEEcCCCCeEEEEecCC
Q 019006 135 IKK---MA--EHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRG--AIQTF-PDKYQITAVSFSDASDKIYTGGIDN 206 (347)
Q Consensus 135 ~~~---~~--~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~--~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg 206 (347)
... +. .|...+..+++++++ .++++++.|+.|++||+.++. ....+ .+...+.+++|+|+++.+++++.||
T Consensus 85 ~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg 163 (337)
T 1gxr_A 85 KSPVSQLDCLNRDNYIRSCKLLPDG-CTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDG 163 (337)
T ss_dssp CSCSEEEECSCTTSBEEEEEECTTS-SEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTS
T ss_pred eeeeecccccCCCCcEEEEEEcCCC-CEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCC
Confidence 322 22 577889999998865 578899999999999998776 33333 3556799999999999999999999
Q ss_pred cEEEEeCCCCceEEEecCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECC
Q 019006 207 DVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSP 286 (347)
Q Consensus 207 ~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 286 (347)
.|++||+++++....+..|...|.+++|+|+++++++++.|+.|++||++.. .....+. ....+.+++|+|
T Consensus 164 ~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~----~~~~~~~-----~~~~v~~~~~s~ 234 (337)
T 1gxr_A 164 NIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREG----RQLQQHD-----FTSQIFSLGYCP 234 (337)
T ss_dssp CEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT----EEEEEEE-----CSSCEEEEEECT
T ss_pred cEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCC----ceEeeec-----CCCceEEEEECC
Confidence 9999999999999999999999999999999999999999999999999743 3333332 235688999999
Q ss_pred CCCEEEEeeCCCeEEEEeCCCceeeEEecCCccCeeeEEEcCCCCEEEEecCCCcEEeecC
Q 019006 287 DGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGEI 347 (347)
Q Consensus 287 ~g~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~i~~~ 347 (347)
++++|++++.||.|++||+.+++.. .+.+|...|..++|+|++++|++++.||.|++||+
T Consensus 235 ~~~~l~~~~~~~~i~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~ 294 (337)
T 1gxr_A 235 TGEWLAVGMESSNVEVLHVNKPDKY-QLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRT 294 (337)
T ss_dssp TSSEEEEEETTSCEEEEETTSSCEE-EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred CCCEEEEEcCCCcEEEEECCCCCeE-EEcCCccceeEEEECCCCCEEEEecCCCcEEEEEC
Confidence 9999999999999999999988754 67899999999999999999999999999999985
No 57
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=4.1e-39 Score=283.95 Aligned_cols=294 Identities=19% Similarity=0.279 Sum_probs=239.7
Q ss_pred cCeeEecCccccEEEEEECCC---CCeEEEeeCCCcEEEEeccC-CCeeeEEEeCcccceeEEEEcCCCCEEEEecCCCe
Q 019006 48 SPIMLLTGHQSAVYTMKFNPA---GTVIASGSHDRDIFLWHVHG-DCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKT 123 (347)
Q Consensus 48 ~~~~~~~~h~~~V~~v~~~~~---~~~l~s~~~d~~v~~w~~~~-~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~ 123 (347)
.++..+.+|.+.|++++|+|+ |++|++|+.||.|++|++.. .......+.+|...|.+++|+|++++|++++.||.
T Consensus 30 ~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~ 109 (368)
T 3mmy_A 30 KDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKT 109 (368)
T ss_dssp CCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSE
T ss_pred ceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCc
Confidence 345678899999999999999 69999999999999999975 33333678899999999999999999999999999
Q ss_pred EEEEECCCCceeeeeeccCcceeEeec--CCCCCCEEEEEcCCCceEEEeCCCCCceeecCCCCceEEEEEcCCCCeEEE
Q 019006 124 LRAWDVETGKQIKKMAEHNSFVNSCCP--SRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIYT 201 (347)
Q Consensus 124 i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 201 (347)
|++||+.+++... +..|...+..+.+ .+. ..++++++.|+.|++||+++++.+..+.....+.++.+.+ ..+++
T Consensus 110 v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~-~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 185 (368)
T 3mmy_A 110 AKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPN-YSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIY--PMAVV 185 (368)
T ss_dssp EEEEETTTTEEEE-EEECSSCEEEEEEEECSS-CEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEET--TEEEE
T ss_pred EEEEEcCCCCcee-eccccCceEEEEEEeCCC-CCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecC--CeeEE
Confidence 9999999887655 5568888888888 554 3578999999999999999998888887777777777764 58889
Q ss_pred EecCCcEEEEeCCCCceEEEec--CCCCceeEEEECCCCCE----EEEEcCCCcEEEEeCCCCCCcCceeEEEeccccc-
Q 019006 202 GGIDNDVKVWDLRKGEVSMTLQ--GHQDMITGMSLSPDGSY----LLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHN- 274 (347)
Q Consensus 202 ~~~dg~i~iwd~~~~~~~~~~~--~~~~~i~~v~~~~~~~~----l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~- 274 (347)
++.++.+++||++......... .+...+.++++.++... +++++.|+.|++||++.... ......+..|...
T Consensus 186 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~-~~~~~~~~~~~~~~ 264 (368)
T 3mmy_A 186 ATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNP-AKDNFTFKCHRSNG 264 (368)
T ss_dssp EEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCH-HHHSEEEECSEEC-
T ss_pred EeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCc-cccceeeeeeeccc
Confidence 9999999999998765443322 23344566666555544 99999999999999985421 1334445554321
Q ss_pred -------cccceEEEEECCCCCEEEEeeCCCeEEEEeCCCceeeEEecCCccCeeeEEEcCCCCEEEEecCCCcEEeec
Q 019006 275 -------FEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGE 346 (347)
Q Consensus 275 -------~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~i~~ 346 (347)
....+.+++|+|++++|++|+.||.|++||+.+++++..+.+|...|.+++|+|++++|++++.|+..+.++
T Consensus 265 ~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d~~~~~~~ 343 (368)
T 3mmy_A 265 TNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGHE 343 (368)
T ss_dssp ---CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSCEEEEEECTTSSCEEEEECCCSTTCGG
T ss_pred ccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCCCceEEEECCCCCeEEEEeccccccccc
Confidence 012689999999999999999999999999999999999999999999999999999999999987655443
No 58
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=3.5e-39 Score=290.17 Aligned_cols=284 Identities=16% Similarity=0.212 Sum_probs=235.1
Q ss_pred cCccccEEEEEECCCCCeEEEeeCCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEECCCCc
Q 019006 54 TGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGK 133 (347)
Q Consensus 54 ~~h~~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 133 (347)
.+| ..+....|+|++++||+|+.||.|++|++.. ......+.+|...|.+++|+|++++|++++.|+.|++||+.+++
T Consensus 95 ~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~ 172 (420)
T 3vl1_A 95 KRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNF-NLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGS 172 (420)
T ss_dssp CSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTS-CEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC
T ss_pred ecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCC-cceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCc
Confidence 344 4455557899999999999999999999863 34455567999999999999999999999999999999999999
Q ss_pred eeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeecCC----CCc---------------------eE
Q 019006 134 QIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPD----KYQ---------------------IT 188 (347)
Q Consensus 134 ~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~~----~~~---------------------v~ 188 (347)
.+..+..|...+.++++++++ .++++++.|++|++||+++++.+..+.. ... +.
T Consensus 173 ~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~ 251 (420)
T 3vl1_A 173 NPRTLIGHRATVTDIAIIDRG-RNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKN 251 (420)
T ss_dssp CCEEEECCSSCEEEEEEETTT-TEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCC
T ss_pred CceEEcCCCCcEEEEEEcCCC-CEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCccc
Confidence 888999999999999998865 5788999999999999998887766642 223 34
Q ss_pred EEEEcCCCCeEEEEecCCcEEEEeCCCCceEEEec-CCCCceeEEEECCCCC-EEEEEcCCCcEEEEeCCCCCCcCceeE
Q 019006 189 AVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQ-GHQDMITGMSLSPDGS-YLLTNGMDCKLCIWDMRPYAPQNRCVK 266 (347)
Q Consensus 189 ~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~~i~~v~~~~~~~-~l~t~~~d~~i~~wd~~~~~~~~~~~~ 266 (347)
+++|+|++.++++++.||.|++||+++++....+. .|...|.+++|+|+++ +|++++.||.|++||++... ..+.
T Consensus 252 ~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~---~~~~ 328 (420)
T 3vl1_A 252 NLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPE---CPVG 328 (420)
T ss_dssp TTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTT---SCSE
T ss_pred ceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCc---Cchh
Confidence 45567889999999999999999999988777664 4788999999999998 99999999999999998542 2234
Q ss_pred EEeccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCCc---------eeeEEecCCccCeeeEEEcCCCC---EEE
Q 019006 267 ILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSR---------RILYKLPGHTGSVNESVFHATEP---VIG 334 (347)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~---------~~~~~~~~h~~~v~~~~~~~~~~---~l~ 334 (347)
.+..+. ...+..+ +.+++++|++++.||.|++||+... .....+.+|.+.|..++|+|+++ .++
T Consensus 329 ~~~~~~---~~~v~~~-~~~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~ 404 (420)
T 3vl1_A 329 EFLINE---GTPINNV-YFAAGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVL 404 (420)
T ss_dssp EEEEST---TSCEEEE-EEETTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEE
T ss_pred hhhccC---CCCceEE-EeCCCCEEEEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcceEE
Confidence 444432 2356666 4568899999999999999998763 22335678899999999999999 788
Q ss_pred EecCCCcEEeecC
Q 019006 335 SCSSDKQIYLGEI 347 (347)
Q Consensus 335 s~s~D~~i~i~~~ 347 (347)
+++.+|.+.+|++
T Consensus 405 a~g~~g~~~~~~~ 417 (420)
T 3vl1_A 405 EVGKNNFCALYNL 417 (420)
T ss_dssp EEETTTEEEEEES
T ss_pred EEcCCceEEEEec
Confidence 8889999999975
No 59
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=6e-39 Score=281.59 Aligned_cols=262 Identities=21% Similarity=0.353 Sum_probs=206.7
Q ss_pred ecCccccEEEEEECCCCCeEEEeeCCCcEEEEeccCCC-eeeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEECCC
Q 019006 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDC-KNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVET 131 (347)
Q Consensus 53 ~~~h~~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 131 (347)
..+|...|.+++|+|++++||+|+.|+++++|+..... .....+.+|...|.+++|+|++++|++++.|++|++||+.+
T Consensus 57 ~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~ 136 (345)
T 3fm0_A 57 SEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDE 136 (345)
T ss_dssp CSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECT
T ss_pred ccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCC
Confidence 47899999999999999999999999999999986432 34567889999999999999999999999999999999987
Q ss_pred Cc---eeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCc--eeec-CCCCceEEEEEcCCCCeEEEEecC
Q 019006 132 GK---QIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGA--IQTF-PDKYQITAVSFSDASDKIYTGGID 205 (347)
Q Consensus 132 ~~---~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~--~~~~-~~~~~v~~~~~~~~~~~l~~~~~d 205 (347)
+. .+..+..|...+..+++++.+ .++++|+.|++|++||.+.+.. ...+ .+...|.+++|+|++++|++++.|
T Consensus 137 ~~~~~~~~~~~~h~~~v~~~~~~p~~-~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D 215 (345)
T 3fm0_A 137 EDEYECVSVLNSHTQDVKHVVWHPSQ-ELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDD 215 (345)
T ss_dssp TSCEEEEEEECCCCSCEEEEEECSSS-SCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred CCCeEEEEEecCcCCCeEEEEECCCC-CEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCC
Confidence 64 345667788889999998876 4788999999999999987643 2334 456789999999999999999999
Q ss_pred CcEEEEeCCCC---------------ceEEEecC-CCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEe
Q 019006 206 NDVKVWDLRKG---------------EVSMTLQG-HQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILE 269 (347)
Q Consensus 206 g~i~iwd~~~~---------------~~~~~~~~-~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~ 269 (347)
++|++||.... ++...+.+ |...|.+++|+|++..|++++.|+.|++|+.............+.
T Consensus 216 ~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~ 295 (345)
T 3fm0_A 216 RTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLT 295 (345)
T ss_dssp SCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEE
T ss_pred CeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEE
Confidence 99999996321 22334444 788999999999999999999999999999875432222111111
Q ss_pred cc-ccccccceEEEEECCCC-CEEEEeeCCCeEEEEeCCCceeeEEec
Q 019006 270 GH-QHNFEKNLLKCGWSPDG-SKVTAGSSDRMVYIWDTTSRRILYKLP 315 (347)
Q Consensus 270 ~~-~~~~~~~~~~~~~s~~g-~~l~sgs~dg~i~vwd~~~~~~~~~~~ 315 (347)
.+ ...+...|.+++|+|++ .+||+|+.||.|++|++.+++.+...+
T Consensus 296 ~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~~~~~~~ 343 (345)
T 3fm0_A 296 AHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPEGLHHHH 343 (345)
T ss_dssp EEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC--------
T ss_pred eeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCCCCccccc
Confidence 11 11224679999999998 499999999999999999887765543
No 60
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=1.3e-38 Score=290.27 Aligned_cols=280 Identities=23% Similarity=0.405 Sum_probs=237.6
Q ss_pred eeEecCccccE-EEEEECCCCCeEEEeeCCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEE
Q 019006 50 IMLLTGHQSAV-YTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWD 128 (347)
Q Consensus 50 ~~~~~~h~~~V-~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd 128 (347)
...+.+|...| .++.+ ++++|++|+.||+|++|++.. .+....+.+|...|.+++|++++ +|++|+.||+|++||
T Consensus 114 ~~~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~-~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd 189 (464)
T 3v7d_B 114 RTTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSIN-KKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWD 189 (464)
T ss_dssp EEEEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTT-TEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEE
T ss_pred eEEEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCC-CcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEE
Confidence 45788998875 66666 578999999999999999864 45667889999999999999987 999999999999999
Q ss_pred CCCCceeeeeeccCcceeEeecCC-CCCCEEEEEcCCCceEEEeCCCCCcee-----------------------ec-CC
Q 019006 129 VETGKQIKKMAEHNSFVNSCCPSR-RGPPLVVSGSDDGTAKLWDMRQRGAIQ-----------------------TF-PD 183 (347)
Q Consensus 129 ~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~s~~~d~~i~iwd~~~~~~~~-----------------------~~-~~ 183 (347)
+.+++.+..+..|...+..+.+.+ .+..++++|+.|++|++||+++..... .+ .+
T Consensus 190 ~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (464)
T 3v7d_B 190 IKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGH 269 (464)
T ss_dssp TTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCC
T ss_pred CCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCc
Confidence 999999999988999998887764 344689999999999999998765321 11 23
Q ss_pred CCceEEEEEcCCCCeEEEEecCCcEEEEeCCCCceEEEecCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCc
Q 019006 184 KYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNR 263 (347)
Q Consensus 184 ~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~ 263 (347)
...+.++ +++++.+++++.||.|++||+++++....+.+|...|.+++|+|+++++++++.|+.|++||++. ..
T Consensus 270 ~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~----~~ 343 (464)
T 3v7d_B 270 MASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLEN----GE 343 (464)
T ss_dssp SSCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTT----TE
T ss_pred cceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCC----Cc
Confidence 3345554 56789999999999999999999999999999999999999999999999999999999999974 35
Q ss_pred eeEEEeccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCCceeeEEecCCccCeeeEEEcCCCCEEEEecCCCcEE
Q 019006 264 CVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIY 343 (347)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~ 343 (347)
++..+.+|. ..+.+++|+ +.+|++|+.||.|++||+.++...... .|...+..++|++++.++++++ |+.|+
T Consensus 344 ~~~~~~~h~----~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~-dg~i~ 415 (464)
T 3v7d_B 344 LMYTLQGHT----ALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFSY-HHTNLSAITTFYVSDNILVSGS-ENQFN 415 (464)
T ss_dssp EEEEECCCS----SCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEE-ECTTCCCEEEEEECSSEEEEEE-TTEEE
T ss_pred EEEEEeCCC----CcEEEEEEc--CCEEEEEeCCCcEEEEECCCCceeeee-cCCCCccEEEEEeCCCEEEEec-CCeEE
Confidence 566666653 467888887 589999999999999999988776655 3667788899999999999998 99999
Q ss_pred eecC
Q 019006 344 LGEI 347 (347)
Q Consensus 344 i~~~ 347 (347)
+||+
T Consensus 416 iwd~ 419 (464)
T 3v7d_B 416 IYNL 419 (464)
T ss_dssp EEET
T ss_pred EEEC
Confidence 9985
No 61
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=1.2e-38 Score=300.11 Aligned_cols=288 Identities=19% Similarity=0.339 Sum_probs=252.2
Q ss_pred cCeeEecCcccc-EEEEEECC--CCCeEEEeeCCCcEEEEeccC-------CCeeeEEEeCcccceeEEEEcCCCCEEEE
Q 019006 48 SPIMLLTGHQSA-VYTMKFNP--AGTVIASGSHDRDIFLWHVHG-------DCKNFMVLKGHKNAILDLHWTTDGSQIIS 117 (347)
Q Consensus 48 ~~~~~~~~h~~~-V~~v~~~~--~~~~l~s~~~d~~v~~w~~~~-------~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 117 (347)
.+...+.+|... |++++|+| ++++||+|+.||.|++|++.. .......+.+|...|.+++|+|++++|++
T Consensus 54 ~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 133 (615)
T 1pgu_A 54 PPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCV 133 (615)
T ss_dssp CSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEE
T ss_pred ccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEE
Confidence 356778999999 99999999 999999999999999999942 23445677889999999999999999999
Q ss_pred ecCC----CeEEEEECCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeecC-CCC---ceEE
Q 019006 118 ASPD----KTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFP-DKY---QITA 189 (347)
Q Consensus 118 ~~~d----g~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~-~~~---~v~~ 189 (347)
++.+ +.|++|| .++.+..+..|...+..+.+++.+..++++++.|+.|++||+.+.+.+..+. +.. .+.+
T Consensus 134 ~~~~~~~~~~v~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~ 211 (615)
T 1pgu_A 134 VGEGRDNFGVFISWD--SGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRD 211 (615)
T ss_dssp EECCSSCSEEEEETT--TCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEE
T ss_pred eccCCCCccEEEEEE--CCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEE
Confidence 9988 6888887 5667788889999999999999887789999999999999999888877776 445 7999
Q ss_pred EEEcCC-CCeEEEEecCCcEEEEeCCCCceEEEe-c---CCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCce
Q 019006 190 VSFSDA-SDKIYTGGIDNDVKVWDLRKGEVSMTL-Q---GHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRC 264 (347)
Q Consensus 190 ~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~-~---~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~ 264 (347)
++|+|+ ++++++++.||.|++||+++++....+ . .|...|.+++|+ ++++|++++.|+.|++||++. ...
T Consensus 212 ~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~----~~~ 286 (615)
T 1pgu_A 212 VEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTT----SKC 286 (615)
T ss_dssp EEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTT----TEE
T ss_pred EEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCC----CcE
Confidence 999999 999999999999999999999988888 6 899999999999 999999999999999999874 344
Q ss_pred eEEEeccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCCceeeEEecCCccCeeeEEEcCCCCEEEEecCCCcEEe
Q 019006 265 VKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYL 344 (347)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~i 344 (347)
...+..+.......+..+.|+ ++.+|++|+.||.|++||+.+++.+..+.+|...|.+++| |+ +++++.||.|++
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~-~~---l~~~~~dg~i~~ 361 (615)
T 1pgu_A 287 VQKWTLDKQQLGNQQVGVVAT-GNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTV-NP---LISGSYDGRIME 361 (615)
T ss_dssp EEEEECCTTCGGGCEEEEEEE-ETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEET-TT---TEEEETTSCEEE
T ss_pred EEEEcCCCCcccCceeEEEeC-CCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEe-cC---cEEECCCCeEEE
Confidence 555655543445667788885 8999999999999999999999999999999999999999 77 888888888888
Q ss_pred ecC
Q 019006 345 GEI 347 (347)
Q Consensus 345 ~~~ 347 (347)
|++
T Consensus 362 w~~ 364 (615)
T 1pgu_A 362 WSS 364 (615)
T ss_dssp TTT
T ss_pred EEc
Confidence 874
No 62
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=4.2e-40 Score=296.21 Aligned_cols=278 Identities=16% Similarity=0.208 Sum_probs=228.9
Q ss_pred cEEEEEECCCCCeEEEeeCCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEECCCCceeeee
Q 019006 59 AVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKM 138 (347)
Q Consensus 59 ~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 138 (347)
.+++++|+|++++|++|+.|+.|++|+.... .....+..| ..+....|++++++|++++.||.|++||+.+++....+
T Consensus 58 ~~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~-~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 135 (420)
T 3vl1_A 58 AGKGNTFEKVGSHLYKARLDGHDFLFNTIIR-DGSKMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREID 135 (420)
T ss_dssp CCTTCEEEEEETTEEEEEETTEEEEEECCSE-ETTTTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEET
T ss_pred cccceeeeecCCeEEEEEcCCcEEEEEeccc-ceeeEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeec
Confidence 3457899999999999999999999998532 222223344 34455578999999999999999999999998888777
Q ss_pred eccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeecC-CCCceEEEEEcCCCCeEEEEecCCcEEEEeCCCCc
Q 019006 139 AEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFP-DKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGE 217 (347)
Q Consensus 139 ~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 217 (347)
..|...+.++++++++ .++++|+.|++|++||+++++.+..+. +...|.+++|+|++..+++++.|+.|++||+++++
T Consensus 136 ~~h~~~v~~~~~~~~~-~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~ 214 (420)
T 3vl1_A 136 QAHVSEITKLKFFPSG-EALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGT 214 (420)
T ss_dssp TSSSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTE
T ss_pred ccccCccEEEEECCCC-CEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCc
Confidence 8899999999998875 588999999999999999888777765 56789999999999999999999999999999998
Q ss_pred eEEEecCC---C---------------------CceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEecccc
Q 019006 218 VSMTLQGH---Q---------------------DMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQH 273 (347)
Q Consensus 218 ~~~~~~~~---~---------------------~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~ 273 (347)
....+..| . ..+.+++|+|++++|++++.||.|++||++.. .....+..
T Consensus 215 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~----~~~~~~~~--- 287 (420)
T 3vl1_A 215 TIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSK----EQTIQLPS--- 287 (420)
T ss_dssp EEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTC----CEEEEECC---
T ss_pred eeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCC----ceeEEccc---
Confidence 88887653 2 44555667899999999999999999999753 22233322
Q ss_pred ccccceEEEEECCCCC-EEEEeeCCCeEEEEeCCCcee-eEEecC-CccCeeeEEEcCCCCEEEEecCCCcEEeecC
Q 019006 274 NFEKNLLKCGWSPDGS-KVTAGSSDRMVYIWDTTSRRI-LYKLPG-HTGSVNESVFHATEPVIGSCSSDKQIYLGEI 347 (347)
Q Consensus 274 ~~~~~~~~~~~s~~g~-~l~sgs~dg~i~vwd~~~~~~-~~~~~~-h~~~v~~~~~~~~~~~l~s~s~D~~i~i~~~ 347 (347)
.....+.+++|+|+++ +|++|+.||.|++||+.+++. +..+.+ |...|..+.| +++.+|++++.|+.|++|++
T Consensus 288 ~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~l~s~~~d~~v~iw~~ 363 (420)
T 3vl1_A 288 KFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYF-AAGALFVSSGFDTSIKLDII 363 (420)
T ss_dssp TTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEE-ETTEEEEEETTTEEEEEEEE
T ss_pred ccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEe-CCCCEEEEecCCccEEEEec
Confidence 1245799999999999 999999999999999998754 677777 5666777755 57789999999999999984
No 63
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=1e-38 Score=310.27 Aligned_cols=288 Identities=22% Similarity=0.353 Sum_probs=250.7
Q ss_pred CeeEecCccccEEEEEECCCCCeEEEeeCCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEE
Q 019006 49 PIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWD 128 (347)
Q Consensus 49 ~~~~~~~h~~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd 128 (347)
....+.+|.+.|.+++|+|++++||+|+.||.|++|++.. ......+.+|...|.+++|+|++++|++++.||.|++||
T Consensus 5 ~~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~-~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~ 83 (814)
T 3mkq_A 5 IKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYET-QVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFN 83 (814)
T ss_dssp CEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTT-TEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEE
T ss_pred cceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCC-CceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEE
Confidence 3467899999999999999999999999999999999854 456677889999999999999999999999999999999
Q ss_pred CCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCC-Cceeec-CCCCceEEEEEcC-CCCeEEEEecC
Q 019006 129 VETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQR-GAIQTF-PDKYQITAVSFSD-ASDKIYTGGID 205 (347)
Q Consensus 129 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~-~~~~~~-~~~~~v~~~~~~~-~~~~l~~~~~d 205 (347)
+.+++.+..+..|...+..+++++++ .++++++.||+|++||+.++ .....+ .+...+.+++|+| ++..+++++.|
T Consensus 84 ~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d 162 (814)
T 3mkq_A 84 YNTGEKVVDFEAHPDYIRSIAVHPTK-PYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLD 162 (814)
T ss_dssp TTTCCEEEEEECCSSCEEEEEECSSS-SEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETT
T ss_pred CCCCcEEEEEecCCCCEEEEEEeCCC-CEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCC
Confidence 99999999999999999999998876 47889999999999999876 344444 3567899999999 78899999999
Q ss_pred CcEEEEeCCCCceEEEecCCC-CceeEEEECC--CCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEeccccccccceEEE
Q 019006 206 NDVKVWDLRKGEVSMTLQGHQ-DMITGMSLSP--DGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKC 282 (347)
Q Consensus 206 g~i~iwd~~~~~~~~~~~~~~-~~i~~v~~~~--~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (347)
|.|++||++.+.....+..+. ..+..++|+| +++++++++.|+.|++||++. ......+..|. ..+.++
T Consensus 163 g~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~----~~~~~~~~~~~----~~v~~~ 234 (814)
T 3mkq_A 163 RTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQT----KSCVATLEGHM----SNVSFA 234 (814)
T ss_dssp SEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTT----TEEEEEEECCS----SCEEEE
T ss_pred CeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCC----CcEEEEEcCCC----CCEEEE
Confidence 999999998887777766554 7899999999 999999999999999999874 34455565553 568899
Q ss_pred EECCCCCEEEEeeCCCeEEEEeCCCceeeEEecCCccCeeeEEEcCCCCE-EEEecCCCcEEeec
Q 019006 283 GWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPV-IGSCSSDKQIYLGE 346 (347)
Q Consensus 283 ~~s~~g~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~-l~s~s~D~~i~i~~ 346 (347)
+|+|++++|++|+.||.|++||..+++.+..+..|...+..++|+|++.. +++++.|+.+.+|+
T Consensus 235 ~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (814)
T 3mkq_A 235 VFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLS 299 (814)
T ss_dssp EECSSSSEEEEEETTSCEEEEETTTCSEEEEECCSSSSEEEEEECTTCGGGEEEEEETTEEEEEE
T ss_pred EEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEEEEEccCCCceEEEEEeCCCEEEEE
Confidence 99999999999999999999999999999999999999999999999873 24455566666665
No 64
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=2.7e-38 Score=286.13 Aligned_cols=271 Identities=27% Similarity=0.481 Sum_probs=236.2
Q ss_pred ecCccccEEEEEECCCCCeEEEeeCCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEECCCC
Q 019006 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETG 132 (347)
Q Consensus 53 ~~~h~~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~ 132 (347)
..+|...|++++| +++.|++|+.||.|++||... .+....+.+|...|.+++| ++++|++|+.||.|++||+.++
T Consensus 129 ~~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~-~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~ 203 (435)
T 1p22_A 129 RSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNT-LECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTG 203 (435)
T ss_dssp CCSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSS-CCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSC
T ss_pred ccCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCC-CeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCC
Confidence 3467788999887 799999999999999999864 4556778899999999999 6889999999999999999999
Q ss_pred ceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCce---eec-CCCCceEEEEEcCCCCeEEEEecCCcE
Q 019006 133 KQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAI---QTF-PDKYQITAVSFSDASDKIYTGGIDNDV 208 (347)
Q Consensus 133 ~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~---~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i 208 (347)
+.+..+..|...+..+.+.+ .++++|+.|+.|++||++++... ..+ .+...+.++.+ +++.+++|+.||.|
T Consensus 204 ~~~~~~~~h~~~v~~l~~~~---~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i 278 (435)
T 1p22_A 204 EMLNTLIHHCEAVLHLRFNN---GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTI 278 (435)
T ss_dssp CEEEEECCCCSCEEEEECCT---TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEE
T ss_pred cEEEEEcCCCCcEEEEEEcC---CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeE
Confidence 99999999999998888753 48999999999999999877654 222 45678999998 67899999999999
Q ss_pred EEEeCCCCceEEEecCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCC
Q 019006 209 KVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDG 288 (347)
Q Consensus 209 ~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g 288 (347)
++||+++++....+.+|...|.++.| +++++++++.||.|++||++. ..++..+.+|. ..+.+++| ++
T Consensus 279 ~vwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~g~~dg~i~iwd~~~----~~~~~~~~~h~----~~v~~~~~--~~ 346 (435)
T 1p22_A 279 KVWNTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIEC----GACLRVLEGHE----ELVRCIRF--DN 346 (435)
T ss_dssp EEEETTTCCEEEEEECCSSCEEEEEE--ETTEEEEEETTSCEEEEETTT----CCEEEEECCCS----SCEEEEEC--CS
T ss_pred EEEECCcCcEEEEEcCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCC----CCEEEEEeCCc----CcEEEEEe--cC
Confidence 99999999999999999999999998 478999999999999999984 34566666653 46778877 78
Q ss_pred CEEEEeeCCCeEEEEeCCCce---------eeEEecCCccCeeeEEEcCCCCEEEEecCCCcEEeecC
Q 019006 289 SKVTAGSSDRMVYIWDTTSRR---------ILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGEI 347 (347)
Q Consensus 289 ~~l~sgs~dg~i~vwd~~~~~---------~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~i~~~ 347 (347)
.+|++|+.||.|++||+.++. .+..+.+|.+.|.+++| ++..|++++.||+|++||+
T Consensus 347 ~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~ 412 (435)
T 1p22_A 347 KRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWDF 412 (435)
T ss_dssp SEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEEEEC-
T ss_pred CEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEEEEEEC
Confidence 999999999999999998766 78899999999999999 6788999999999999985
No 65
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=5.5e-38 Score=276.42 Aligned_cols=247 Identities=22% Similarity=0.420 Sum_probs=216.0
Q ss_pred eeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEECCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEe
Q 019006 92 NFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWD 171 (347)
Q Consensus 92 ~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd 171 (347)
....+.+|...|.+++|+|++++|++|+.||+|++||..+++....+..+...+..+.+++.+ .++++|+.|+.+++|+
T Consensus 56 ~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g-~~lasg~~d~~i~v~~ 134 (354)
T 2pbi_B 56 TRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSG-CAIACGGLDNKCSVYP 134 (354)
T ss_dssp EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTS-SEEEEESTTSEEEEEE
T ss_pred EEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCC-CEEEEeeCCCCEEEEE
Confidence 345788999999999999999999999999999999999988888888888889999998876 5889999999999999
Q ss_pred CCCCCc------eee-cCCCCceEEEEEcCCCCeEEEEecCCcEEEEeCCCCceEEEecCCCCceeEEEECC--CCCEEE
Q 019006 172 MRQRGA------IQT-FPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSP--DGSYLL 242 (347)
Q Consensus 172 ~~~~~~------~~~-~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~--~~~~l~ 242 (347)
+..... ... ..+...+.++.|+|++..+++++.|++|++||+++++....+.+|...|.+++|+| ++++|+
T Consensus 135 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~ 214 (354)
T 2pbi_B 135 LTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFV 214 (354)
T ss_dssp CCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEE
T ss_pred EeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEE
Confidence 864321 112 23566799999999999999999999999999999999999999999999999987 468999
Q ss_pred EEcCCCcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCCceeeEEecCC--ccC
Q 019006 243 TNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGH--TGS 320 (347)
Q Consensus 243 t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~~~~~~h--~~~ 320 (347)
+++.|+.|++||++. ..++..+..|. ..+.+++|+|++.+|++|+.|+.|++||++.++.+..+..+ ...
T Consensus 215 sgs~Dg~v~~wd~~~----~~~~~~~~~h~----~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~ 286 (354)
T 2pbi_B 215 SGGCDKKAMVWDMRS----GQCVQAFETHE----SDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFG 286 (354)
T ss_dssp EEETTSCEEEEETTT----CCEEEEECCCS----SCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSC
T ss_pred EEeCCCeEEEEECCC----CcEEEEecCCC----CCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccc
Confidence 999999999999985 34566666653 57899999999999999999999999999988877666544 347
Q ss_pred eeeEEEcCCCCEEEEecCCCcEEeecC
Q 019006 321 VNESVFHATEPVIGSCSSDKQIYLGEI 347 (347)
Q Consensus 321 v~~~~~~~~~~~l~s~s~D~~i~i~~~ 347 (347)
+..++|+|++.+|++++.|++|++||+
T Consensus 287 ~~~~~~s~~g~~l~~g~~d~~i~vwd~ 313 (354)
T 2pbi_B 287 ASSVDFSLSGRLLFAGYNDYTINVWDV 313 (354)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred eeEEEEeCCCCEEEEEECCCcEEEEEC
Confidence 899999999999999999999999985
No 66
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=7.1e-38 Score=270.80 Aligned_cols=249 Identities=26% Similarity=0.457 Sum_probs=218.2
Q ss_pred eeeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEECCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEE
Q 019006 91 KNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLW 170 (347)
Q Consensus 91 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iw 170 (347)
.....+.+|...|.+++|+|++++|++++.||.|++|++.+++....+..|...+..+++++++ .++++++.|+.|++|
T Consensus 14 ~~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~d~~i~vw 92 (312)
T 4ery_A 14 ALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS-NLLVSASDDKTLKIW 92 (312)
T ss_dssp EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTS-SEEEEEETTSEEEEE
T ss_pred eeEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCC-CEEEEECCCCEEEEE
Confidence 3445688999999999999999999999999999999999999888888999999999998865 688999999999999
Q ss_pred eCCCCCceeecC-CCCceEEEEEcCCCCeEEEEecCCcEEEEeCCCCceEEEecCCCCceeEEEECCCCCEEEEEcCCCc
Q 019006 171 DMRQRGAIQTFP-DKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCK 249 (347)
Q Consensus 171 d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~~d~~ 249 (347)
|++++..+..+. +...+.++.|+|+++++++++.|+.|++||+++++....+..|...|.+++|+|+++++++++.|+.
T Consensus 93 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 172 (312)
T 4ery_A 93 DVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGL 172 (312)
T ss_dssp ETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred ECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCc
Confidence 999988877765 5568999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCCceeeEEecCCccCee--eEEE-
Q 019006 250 LCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVN--ESVF- 326 (347)
Q Consensus 250 i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~v~--~~~~- 326 (347)
|++||++.. ..+..+... ....+..++|+|++++|++++.||.|++||+.+++.+..+.+|...+. ...|
T Consensus 173 i~~wd~~~~----~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (312)
T 4ery_A 173 CRIWDTASG----QCLKTLIDD---DNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFS 245 (312)
T ss_dssp EEEEETTTC----CEEEEECCS---SCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEE
T ss_pred EEEEECCCC----ceeeEEecc---CCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEE
Confidence 999999753 233333221 134678899999999999999999999999999999999999976543 2334
Q ss_pred cCCCCEEEEecCCCcEEeecC
Q 019006 327 HATEPVIGSCSSDKQIYLGEI 347 (347)
Q Consensus 327 ~~~~~~l~s~s~D~~i~i~~~ 347 (347)
.+++.+|++++.||.|++||+
T Consensus 246 ~~~~~~l~sg~~dg~i~vwd~ 266 (312)
T 4ery_A 246 VTGGKWIVSGSEDNLVYIWNL 266 (312)
T ss_dssp CSSSCEEEECCTTSCEEEEET
T ss_pred eCCCcEEEEECCCCEEEEEEC
Confidence 467889999999999999985
No 67
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=2.5e-38 Score=297.91 Aligned_cols=297 Identities=15% Similarity=0.246 Sum_probs=244.3
Q ss_pred CCcCeeEecCccccEEEEEECCCCC-eEEEeeCCCcEEEEeccCCCeeeEEEeCccc---ceeEEEEcCC-CCEEEEecC
Q 019006 46 LESPIMLLTGHQSAVYTMKFNPAGT-VIASGSHDRDIFLWHVHGDCKNFMVLKGHKN---AILDLHWTTD-GSQIISASP 120 (347)
Q Consensus 46 ~~~~~~~~~~h~~~V~~v~~~~~~~-~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~---~v~~~~~~~~-~~~l~s~~~ 120 (347)
...++..+.+|...|.+++|+|+++ +|++++.|+.|++|+.. ..+....+.+|.. .|.+++|+|+ +++|++++.
T Consensus 149 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 227 (615)
T 1pgu_A 149 SGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGP-PFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGS 227 (615)
T ss_dssp TCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETT-TBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEET
T ss_pred CCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCC-CcceeeeecccCCCCceEEEEEECCCCCCEEEEEeC
Confidence 3445677889999999999999998 89999999999999985 4456677889999 9999999999 999999999
Q ss_pred CCeEEEEECCCCceeeee-e---ccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeecCCC-----CceEEEE
Q 019006 121 DKTLRAWDVETGKQIKKM-A---EHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDK-----YQITAVS 191 (347)
Q Consensus 121 dg~i~iwd~~~~~~~~~~-~---~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~~~-----~~v~~~~ 191 (347)
||.|++||+.+++.+..+ . .|...+..+.+. +..++++++.|+.|++||+++++.+..+... ..+.++.
T Consensus 228 dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (615)
T 1pgu_A 228 DRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL--DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVV 305 (615)
T ss_dssp TCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES--SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEE
T ss_pred CCeEEEEECCCCCEeEEecccccccCCceEEEEEc--CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEE
Confidence 999999999999988888 5 788889999888 5578999999999999999988877766543 4677777
Q ss_pred EcCCCCeEEEEecCCcEEEEeCCCCceEEEecCCCCceeEEEECCC---------------------------------C
Q 019006 192 FSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPD---------------------------------G 238 (347)
Q Consensus 192 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~---------------------------------~ 238 (347)
+. ++..+++++.||.|++||+++++....+.+|...|.+++| |+ +
T Consensus 306 ~~-~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~-~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~~~~ 383 (615)
T 1pgu_A 306 AT-GNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTV-NPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKA 383 (615)
T ss_dssp EE-ETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEET-TTTEEEETTSCEEETTTTEEECCCCSCEEEEECCST
T ss_pred eC-CCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEe-cCcEEECCCCeEEEEEchhhcCcccCceEEEEECCC
Confidence 75 8899999999999999999988888888777766666666 44 5
Q ss_pred CEEEEEcCCCcEEEEeCCCCCC------------------------------c---------------------------
Q 019006 239 SYLLTNGMDCKLCIWDMRPYAP------------------------------Q--------------------------- 261 (347)
Q Consensus 239 ~~l~t~~~d~~i~~wd~~~~~~------------------------------~--------------------------- 261 (347)
+.+++++.|+.+++||+..... .
T Consensus 384 ~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 463 (615)
T 1pgu_A 384 QEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGL 463 (615)
T ss_dssp TCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEE
T ss_pred cEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEcCCEEEEee
Confidence 6666777777777776542110 0
Q ss_pred --CceeEEEe--------ccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCCceeeEEecC-CccCeeeEEEcC--
Q 019006 262 --NRCVKILE--------GHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPG-HTGSVNESVFHA-- 328 (347)
Q Consensus 262 --~~~~~~~~--------~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~~~~~~-h~~~v~~~~~~~-- 328 (347)
...+..+. .........+.+++|+|+|++|++|+.||.|++||+.+++.+..+.+ |...|++++|+|
T Consensus 464 ~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~ 543 (615)
T 1pgu_A 464 EEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAE 543 (615)
T ss_dssp TTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC
T ss_pred cCCCeEEEEECCCccccccccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEeecCCCCceeEEEEcCcc
Confidence 00000000 01112245789999999999999999999999999999999999988 999999999999
Q ss_pred --------CCCEEEEecCCCcEEeecC
Q 019006 329 --------TEPVIGSCSSDKQIYLGEI 347 (347)
Q Consensus 329 --------~~~~l~s~s~D~~i~i~~~ 347 (347)
++++|++++.||.|++||+
T Consensus 544 ~~~~~~~~~~~~l~~~~~dg~i~iw~~ 570 (615)
T 1pgu_A 544 KGANEEEIEEDLVATGSLDTNIFIYSV 570 (615)
T ss_dssp ------CCSCCEEEEEETTSCEEEEES
T ss_pred ccccccccCCCEEEEEcCCCcEEEEEC
Confidence 9999999999999999985
No 68
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=4e-39 Score=286.46 Aligned_cols=256 Identities=27% Similarity=0.409 Sum_probs=213.3
Q ss_pred eeEecCccccEEEEEECCCCCeEEEeeCCCcEEEEeccCC------CeeeEEEeCcccceeEEEEcCCC-CEEEEecCCC
Q 019006 50 IMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGD------CKNFMVLKGHKNAILDLHWTTDG-SQIISASPDK 122 (347)
Q Consensus 50 ~~~~~~h~~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~------~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~dg 122 (347)
...+.+|...|.+++|+|+|++||+|+.|+.+++|++... ......+.+|...|.++.|+|++ ..|++|+.|+
T Consensus 101 ~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~ 180 (380)
T 3iz6_a 101 THAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQ 180 (380)
T ss_dssp EEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTS
T ss_pred ceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCC
Confidence 4567899999999999999999999999999999998532 11234578999999999999964 5799999999
Q ss_pred eEEEEECCCCceeeee-----eccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCC-CCceeecC-CCCceEEEEEcCC
Q 019006 123 TLRAWDVETGKQIKKM-----AEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQ-RGAIQTFP-DKYQITAVSFSDA 195 (347)
Q Consensus 123 ~i~iwd~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~-~~~~~~~~-~~~~v~~~~~~~~ 195 (347)
+|++||+.+++.+..+ ..|...+..+.+.+.+..++++|+.|++|++||++. ...+..+. +...|.+++|+|+
T Consensus 181 ~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~ 260 (380)
T 3iz6_a 181 TCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPD 260 (380)
T ss_dssp CEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTT
T ss_pred cEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecC
Confidence 9999999999887766 457778888888777778999999999999999984 45555554 5678999999999
Q ss_pred CCeEEEEecCCcEEEEeCCCCceEEEecCCC-------CceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEE
Q 019006 196 SDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQ-------DMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIL 268 (347)
Q Consensus 196 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-------~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~ 268 (347)
+.+|++|+.||+|++||+++++....+..+. ..|++++|+|++++|++++.||.|++||+... .....+
T Consensus 261 ~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~----~~~~~~ 336 (380)
T 3iz6_a 261 GQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLA----EMVLNL 336 (380)
T ss_dssp SSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTC----CEEEEE
T ss_pred CCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCC----ceEEEE
Confidence 9999999999999999999998877775543 24899999999999999999999999998643 333334
Q ss_pred eccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCCce
Q 019006 269 EGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRR 309 (347)
Q Consensus 269 ~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~ 309 (347)
......+...|.+++|+|+|++|++|+.||.|++|++...+
T Consensus 337 ~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~~ 377 (380)
T 3iz6_a 337 GTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSGHR 377 (380)
T ss_dssp CCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCSSS
T ss_pred ecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCCCc
Confidence 22222235678999999999999999999999999987653
No 69
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.8e-38 Score=307.82 Aligned_cols=163 Identities=15% Similarity=0.146 Sum_probs=137.9
Q ss_pred cCccccEEEEEECCCCCeEEEeeCCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEECCCCc
Q 019006 54 TGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGK 133 (347)
Q Consensus 54 ~~h~~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 133 (347)
..|...|.+++|+| |++|++++.|++|++||+... +....+. |...|++++|+|++++|++|+.||.|++||+.+++
T Consensus 55 ~~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~-~~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~ 131 (902)
T 2oaj_A 55 LEDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQ-KVLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQ 131 (902)
T ss_dssp CSSCCCEEEEEEET-TTEEEEEETTCEEEEEETTTC-SEEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTE
T ss_pred cCCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCC-cEEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCc
Confidence 35888999999999 889999999999999999643 3344444 66889999999999999999999999999999876
Q ss_pred ee-----------eeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeecCCC------------------
Q 019006 134 QI-----------KKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDK------------------ 184 (347)
Q Consensus 134 ~~-----------~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~~~------------------ 184 (347)
.. ..+..|...|.++++++.+..++++|+.|++| +||++++..+..+..+
T Consensus 132 ~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h 210 (902)
T 2oaj_A 132 LSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKR 210 (902)
T ss_dssp EEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCB
T ss_pred cccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCccccccccccc
Confidence 53 22345778899999998766688999999999 9999988777665433
Q ss_pred -CceEEEEEcCCCCeEEEEecCCcEEEEeCCCCceEE
Q 019006 185 -YQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSM 220 (347)
Q Consensus 185 -~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~ 220 (347)
..|.+++|+|++.+|++++.||.|++||+++++...
T Consensus 211 ~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~ 247 (902)
T 2oaj_A 211 TPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIM 247 (902)
T ss_dssp CCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEE
T ss_pred CCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEE
Confidence 569999999999999999999999999998776543
No 70
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=8.5e-38 Score=279.11 Aligned_cols=239 Identities=25% Similarity=0.526 Sum_probs=205.4
Q ss_pred cEEEEEECCCCCeEEEeeCCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEECCCCceeeee
Q 019006 59 AVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKM 138 (347)
Q Consensus 59 ~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 138 (347)
.|++++|+|+|++||+|+.|+.|++||+.. .+....+.+|...|.+++|+|++++|++++.|++|++||+.+++....+
T Consensus 125 ~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~-~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~ 203 (393)
T 1erj_A 125 YIRSVCFSPDGKFLATGAEDRLIRIWDIEN-RKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTL 203 (393)
T ss_dssp BEEEEEECTTSSEEEEEETTSCEEEEETTT-TEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred eEEEEEECCCCCEEEEEcCCCeEEEEECCC-CcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEE
Confidence 499999999999999999999999999964 4566778999999999999999999999999999999999998876666
Q ss_pred eccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeec--------CCCCceEEEEEcCCCCeEEEEecCCcEEE
Q 019006 139 AEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTF--------PDKYQITAVSFSDASDKIYTGGIDNDVKV 210 (347)
Q Consensus 139 ~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~--------~~~~~v~~~~~~~~~~~l~~~~~dg~i~i 210 (347)
. +...+..+++++.+..++++|+.|++|++||++++..+..+ .+...|.+++|+|++.++++|+.|+.|++
T Consensus 204 ~-~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~ 282 (393)
T 1erj_A 204 S-IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKL 282 (393)
T ss_dssp E-CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred E-cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEE
Confidence 4 44567778888766789999999999999999988776554 34567999999999999999999999999
Q ss_pred EeCCCC------------ceEEEecCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEeccccccccc
Q 019006 211 WDLRKG------------EVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKN 278 (347)
Q Consensus 211 wd~~~~------------~~~~~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~ 278 (347)
||+++. .+...+.+|...|.+++|+|++++|++++.|+.|++||++. ...+..+.+|. ..
T Consensus 283 wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~----~~~~~~l~~h~----~~ 354 (393)
T 1erj_A 283 WNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKS----GNPLLMLQGHR----NS 354 (393)
T ss_dssp EEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTT----CCEEEEEECCS----SC
T ss_pred EECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCC----CeEEEEECCCC----CC
Confidence 999753 34567788999999999999999999999999999999874 34556677664 46
Q ss_pred eEEEEECC------CCCEEEEeeCCCeEEEEeCCC
Q 019006 279 LLKCGWSP------DGSKVTAGSSDRMVYIWDTTS 307 (347)
Q Consensus 279 ~~~~~~s~------~g~~l~sgs~dg~i~vwd~~~ 307 (347)
+.+++|++ ++.+|++|+.||.|++|++..
T Consensus 355 v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~ 389 (393)
T 1erj_A 355 VISVAVANGSSLGPEYNVFATGSGDCKARIWKYKK 389 (393)
T ss_dssp EEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEEE
T ss_pred EEEEEecCCcCcCCCCCEEEEECCCCcEEECcccc
Confidence 88888875 789999999999999999754
No 71
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=3.4e-37 Score=279.70 Aligned_cols=280 Identities=26% Similarity=0.489 Sum_probs=243.2
Q ss_pred CeeEecCccccEEEEEECCCCCeEEEeeCCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEE
Q 019006 49 PIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWD 128 (347)
Q Consensus 49 ~~~~~~~h~~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd 128 (347)
.+..+.+|.+.|.+++|+ +..|++|+.||+|++|++.. ......+.+|...|.++.|+ ++.+++++.||.|++||
T Consensus 151 ~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~-~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd 225 (445)
T 2ovr_B 151 CLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAET-GECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWD 225 (445)
T ss_dssp EEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTT-TEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEE
T ss_pred EEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCc-CcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEE
Confidence 345678999999999997 67999999999999999964 45667788999999999996 56899999999999999
Q ss_pred CCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeecC-CCCceEEEEEcCCCCeEEEEecCCc
Q 019006 129 VETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFP-DKYQITAVSFSDASDKIYTGGIDND 207 (347)
Q Consensus 129 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~ 207 (347)
+.+++.+..+..|...+.++.+ ++.++++|+.|+.|++||++++..+..+. +...+.++.| ++..+++++.||.
T Consensus 226 ~~~~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~ 300 (445)
T 2ovr_B 226 IETGQCLHVLMGHVAAVRCVQY---DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTS 300 (445)
T ss_dssp SSSCCEEEEEECCSSCEEEEEE---CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSC
T ss_pred CCCCcEEEEEcCCcccEEEEEE---CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCe
Confidence 9999999999899999888877 34578999999999999999888877775 4567999998 6789999999999
Q ss_pred EEEEeCCCCceEEEecCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCC
Q 019006 208 VKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPD 287 (347)
Q Consensus 208 i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 287 (347)
|++||+++++....+.+|...+.++.+ +++++++++.||.|++||++. ..+...+..+. .....+.+++|+
T Consensus 301 i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~----~~~~~~~~~~~-~~~~~v~~~~~~-- 371 (445)
T 2ovr_B 301 IRVWDVETGNCIHTLTGHQSLTSGMEL--KDNILVSGNADSTVKIWDIKT----GQCLQTLQGPN-KHQSAVTCLQFN-- 371 (445)
T ss_dssp EEEEETTTCCEEEEECCCCSCEEEEEE--ETTEEEEEETTSCEEEEETTT----CCEEEEECSTT-SCSSCEEEEEEC--
T ss_pred EEEEECCCCCEEEEEcCCcccEEEEEE--eCCEEEEEeCCCeEEEEECCC----CcEEEEEccCC-CCCCCEEEEEEC--
Confidence 999999999999999999999988887 467999999999999999974 34455555422 124578888885
Q ss_pred CCEEEEeeCCCeEEEEeCCCceeeEEe-----cCCccCeeeEEEcCCCCEEEEecCCCc----EEeecC
Q 019006 288 GSKVTAGSSDRMVYIWDTTSRRILYKL-----PGHTGSVNESVFHATEPVIGSCSSDKQ----IYLGEI 347 (347)
Q Consensus 288 g~~l~sgs~dg~i~vwd~~~~~~~~~~-----~~h~~~v~~~~~~~~~~~l~s~s~D~~----i~i~~~ 347 (347)
+++|++|+.||.|++||+.+++.+..+ .+|.+.|++++|+|++.++++++.||+ |.+||+
T Consensus 372 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df 440 (445)
T 2ovr_B 372 KNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDF 440 (445)
T ss_dssp SSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEEC
T ss_pred CCEEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEEC
Confidence 689999999999999999999998887 578899999999999999999999998 999985
No 72
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=4.6e-39 Score=278.92 Aligned_cols=248 Identities=17% Similarity=0.242 Sum_probs=201.0
Q ss_pred EEeCcccceeEEEEcCCCCEEEEecCCCeEEEEECCCCc--eeeeeeccCcceeEeecCCC-CCCEEEEEcCCCceEEEe
Q 019006 95 VLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGK--QIKKMAEHNSFVNSCCPSRR-GPPLVVSGSDDGTAKLWD 171 (347)
Q Consensus 95 ~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~-~~~~~~s~~~d~~i~iwd 171 (347)
.+.+|.+.|.+++|+|++++|++|+.|++|++||+.+++ .+..+..|...|..+++.++ ...+|++|+.|++|++||
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd 87 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWR 87 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEEC
T ss_pred ecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEE
Confidence 457899999999999999999999999999999998764 45678889999999998653 356899999999999999
Q ss_pred CCCCC--ceeec-CCCCceEEEEEcCC--CCeEEEEecCCcEEEEeCCCCce---EEEecCCCCceeEEEECCC------
Q 019006 172 MRQRG--AIQTF-PDKYQITAVSFSDA--SDKIYTGGIDNDVKVWDLRKGEV---SMTLQGHQDMITGMSLSPD------ 237 (347)
Q Consensus 172 ~~~~~--~~~~~-~~~~~v~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~---~~~~~~~~~~i~~v~~~~~------ 237 (347)
++++. ....+ .+...|.+++|+|+ +.+|++|+.|+.|++||++.+.. ...+.+|...|.+++|+|+
T Consensus 88 ~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~ 167 (316)
T 3bg1_A 88 EENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSL 167 (316)
T ss_dssp CSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC---
T ss_pred CCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccc
Confidence 98763 33344 35678999999998 77999999999999999987532 3456788889999999997
Q ss_pred -----------CCEEEEEcCCCcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCC----CEEEEeeCCCeEEE
Q 019006 238 -----------GSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDG----SKVTAGSSDRMVYI 302 (347)
Q Consensus 238 -----------~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g----~~l~sgs~dg~i~v 302 (347)
+++|++++.|+.|++||++... ...+...+.+| ...|.+++|+|++ .+|++|+.||.|++
T Consensus 168 ~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~-~~~~~~~l~~h----~~~V~~v~~sp~~~~~~~~las~s~D~~v~i 242 (316)
T 3bg1_A 168 IDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDG-QWKEEQKLEAH----SDWVRDVAWAPSIGLPTSTIASCSQDGRVFI 242 (316)
T ss_dssp ---CCSCCCCCCCBEECCBTTSBCCEEEECTTS-CEEEEECCBCC----SSCEEEEECCCCSSCSCCEEEEEETTCEEEE
T ss_pred cccccccCccccceEEEecCCCeEEEEEeCCCC-ccceeeecccC----CCceEEEEecCCCCCCCceEEEEcCCCeEEE
Confidence 4789999999999999986321 11234445555 3579999999987 89999999999999
Q ss_pred EeCCCc---e-eeEEecCCccCeeeEEEcCCCCEEEEecCCCcEEeecC
Q 019006 303 WDTTSR---R-ILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGEI 347 (347)
Q Consensus 303 wd~~~~---~-~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~i~~~ 347 (347)
||+.+. . ....+.+|...|++++|+|++++||+++.|++|+||+.
T Consensus 243 w~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~ 291 (316)
T 3bg1_A 243 WTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKE 291 (316)
T ss_dssp EECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEE
T ss_pred EEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEE
Confidence 998762 1 22345678999999999999999999999999999973
No 73
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=5.1e-37 Score=278.50 Aligned_cols=275 Identities=28% Similarity=0.494 Sum_probs=237.5
Q ss_pred CeeEecCccccE-EEEEECCCCCeEEEeeCCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEE
Q 019006 49 PIMLLTGHQSAV-YTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAW 127 (347)
Q Consensus 49 ~~~~~~~h~~~V-~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw 127 (347)
+...+.+|.+.| .++. +++++|++|+.||+|++|++.. .+....+.+|...|.+++|+ ++++++++.||+|++|
T Consensus 110 ~~~~l~~h~~~v~~~~~--~~g~~l~sg~~dg~i~vwd~~~-~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vw 184 (445)
T 2ovr_B 110 SPKVLKGHDDHVITCLQ--FCGNRIVSGSDDNTLKVWSAVT-GKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVW 184 (445)
T ss_dssp CCEEEECSTTSCEEEEE--EETTEEEEEETTSCEEEEETTT-CCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEE
T ss_pred eeEEecccCCCcEEEEE--EcCCEEEEEECCCcEEEEECCC-CcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEE
Confidence 456789999875 5554 5689999999999999999963 45567788999999999998 5699999999999999
Q ss_pred ECCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeecC-CCCceEEEEEcCCCCeEEEEecCC
Q 019006 128 DVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFP-DKYQITAVSFSDASDKIYTGGIDN 206 (347)
Q Consensus 128 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg 206 (347)
|+.+++.+..+..|...+..+.+. +..+++|+.|++|++||+.+++.+..+. +...+.++.+ ++..+++++.||
T Consensus 185 d~~~~~~~~~~~~h~~~v~~~~~~---~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg 259 (445)
T 2ovr_B 185 NAETGECIHTLYGHTSTVRCMHLH---EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDF 259 (445)
T ss_dssp ETTTTEEEEEECCCSSCEEEEEEE---TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTS
T ss_pred ECCcCcEEEEECCCCCcEEEEEec---CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCC
Confidence 999999999999999999888774 3579999999999999999888777664 5568999998 678999999999
Q ss_pred cEEEEeCCCCceEEEecCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECC
Q 019006 207 DVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSP 286 (347)
Q Consensus 207 ~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 286 (347)
.|++||+++++....+.+|...|.+++| +++++++++.|+.|++||++. ..++..+.+|. ..+..+.+
T Consensus 260 ~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~----~~~~~~~~~~~----~~v~~~~~-- 327 (445)
T 2ovr_B 260 MVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVET----GNCIHTLTGHQ----SLTSGMEL-- 327 (445)
T ss_dssp CEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTT----CCEEEEECCCC----SCEEEEEE--
T ss_pred EEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCC----CCEEEEEcCCc----ccEEEEEE--
Confidence 9999999999999999999999999999 789999999999999999975 34455565553 34555544
Q ss_pred CCCEEEEeeCCCeEEEEeCCCceeeEEecC---CccCeeeEEEcCCCCEEEEecCCCcEEeecC
Q 019006 287 DGSKVTAGSSDRMVYIWDTTSRRILYKLPG---HTGSVNESVFHATEPVIGSCSSDKQIYLGEI 347 (347)
Q Consensus 287 ~g~~l~sgs~dg~i~vwd~~~~~~~~~~~~---h~~~v~~~~~~~~~~~l~s~s~D~~i~i~~~ 347 (347)
++.+|++|+.||.|++||+.+++.+..+.+ |...|.+++|+ +.+|++++.||.|++||+
T Consensus 328 ~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~ 389 (445)
T 2ovr_B 328 KDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDL 389 (445)
T ss_dssp ETTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEET
T ss_pred eCCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEEC
Confidence 678999999999999999999999988886 88899999996 579999999999999985
No 74
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.7e-38 Score=277.02 Aligned_cols=255 Identities=26% Similarity=0.452 Sum_probs=213.3
Q ss_pred eeEecCccccEEEEEECCCCCeEEEeeCCCcEEEEeccCC-CeeeEEEeCcccceeEEEEcCC--CCEEEEecCCCeEEE
Q 019006 50 IMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGD-CKNFMVLKGHKNAILDLHWTTD--GSQIISASPDKTLRA 126 (347)
Q Consensus 50 ~~~~~~h~~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~-~~~~~~~~~h~~~v~~~~~~~~--~~~l~s~~~dg~i~i 126 (347)
+..+.+|.+.|++++|+|++++||+|+.||.|++|++... ......+.+|...|.+++|+++ +++|++++.||.|++
T Consensus 4 ~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~i 83 (379)
T 3jrp_A 4 VVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLI 83 (379)
T ss_dssp -CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEE
T ss_pred cEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEE
Confidence 4568899999999999999999999999999999999632 3445678899999999999977 899999999999999
Q ss_pred EECCCCc--eeeeeeccCcceeEeecCCCC-CCEEEEEcCCCceEEEeCCCCCce---eecCCCCceEEEEEcC------
Q 019006 127 WDVETGK--QIKKMAEHNSFVNSCCPSRRG-PPLVVSGSDDGTAKLWDMRQRGAI---QTFPDKYQITAVSFSD------ 194 (347)
Q Consensus 127 wd~~~~~--~~~~~~~~~~~v~~~~~~~~~-~~~~~s~~~d~~i~iwd~~~~~~~---~~~~~~~~v~~~~~~~------ 194 (347)
||+.+++ .+..+..|...+..+++++.. ..++++++.|+.|++||++..... ....+...+.+++|+|
T Consensus 84 wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 163 (379)
T 3jrp_A 84 WKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEED 163 (379)
T ss_dssp EEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----
T ss_pred EEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCcccccc
Confidence 9999886 666777788899999998873 468999999999999999876432 2235667899999999
Q ss_pred -------CCCeEEEEecCCcEEEEeCCCCc----eEEEecCCCCceeEEEECCC---CCEEEEEcCCCcEEEEeCCCCCC
Q 019006 195 -------ASDKIYTGGIDNDVKVWDLRKGE----VSMTLQGHQDMITGMSLSPD---GSYLLTNGMDCKLCIWDMRPYAP 260 (347)
Q Consensus 195 -------~~~~l~~~~~dg~i~iwd~~~~~----~~~~~~~~~~~i~~v~~~~~---~~~l~t~~~d~~i~~wd~~~~~~ 260 (347)
++..+++++.||.|++||++++. ....+.+|...|.+++|+|+ +++|++++.||.|++||++....
T Consensus 164 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~ 243 (379)
T 3jrp_A 164 GEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQG 243 (379)
T ss_dssp ------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTS
T ss_pred ccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCc
Confidence 68999999999999999998764 44577889999999999999 89999999999999999986432
Q ss_pred cCceeEEEeccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCC
Q 019006 261 QNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTS 307 (347)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~ 307 (347)
.. ....... ......+.+++|+|+|++|++++.||.|++|++..
T Consensus 244 ~~-~~~~~~~--~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~ 287 (379)
T 3jrp_A 244 PW-KKTLLKE--EKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 287 (379)
T ss_dssp CC-EEEESSS--SCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEE
T ss_pred cc-eeeeecc--ccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCC
Confidence 11 1111111 12346799999999999999999999999999873
No 75
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=7.2e-37 Score=278.85 Aligned_cols=279 Identities=22% Similarity=0.427 Sum_probs=233.4
Q ss_pred CeeEecCccccEEEEEECCCCCeEEEeeCCCcEEEEeccCCCeeeEEEeCcccceeEEEEc--CCCCEEEEecCCCeEEE
Q 019006 49 PIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWT--TDGSQIISASPDKTLRA 126 (347)
Q Consensus 49 ~~~~~~~h~~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~l~s~~~dg~i~i 126 (347)
.+..+.+|.+.|.+++|+|++ .|++|+.||+|++|++.. ......+.+|...|.+++|+ +++.+|++++.||.|++
T Consensus 154 ~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~-~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~v 231 (464)
T 3v7d_B 154 FLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKK-GCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHV 231 (464)
T ss_dssp EEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTT-TEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEE
T ss_pred EEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCC-CcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEE
Confidence 456678999999999999988 999999999999999964 45667788999999999998 57789999999999999
Q ss_pred EECCCCce-----------------------eeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeecC-
Q 019006 127 WDVETGKQ-----------------------IKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFP- 182 (347)
Q Consensus 127 wd~~~~~~-----------------------~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~- 182 (347)
||+.++.. +..+..|...+..+.. ...++++|+.|+.|++||+++++.+..+.
T Consensus 232 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~ 308 (464)
T 3v7d_B 232 WKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSG---HGNIVVSGSYDNTLIVWDVAQMKCLYILSG 308 (464)
T ss_dssp EECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEE---ETTEEEEEETTSCEEEEETTTTEEEEEECC
T ss_pred eeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcC---CCCEEEEEeCCCeEEEEECCCCcEEEEecC
Confidence 99987653 2334456666655532 24689999999999999999888887775
Q ss_pred CCCceEEEEEcCCCCeEEEEecCCcEEEEeCCCCceEEEecCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcC
Q 019006 183 DKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQN 262 (347)
Q Consensus 183 ~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~ 262 (347)
+...+.+++|+|+++.+++|+.||.|++||+++++....+.+|...|.+++|+ ++++++++.||.|++||++...
T Consensus 309 ~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~--- 383 (464)
T 3v7d_B 309 HTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYS--- 383 (464)
T ss_dssp CSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCC---
T ss_pred CCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCc---
Confidence 56789999999999999999999999999999999999999999999999997 5899999999999999997532
Q ss_pred ceeEEEeccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCCceeeEE-ecCCccCeeeEEEcCCCCEEEEecCCCc
Q 019006 263 RCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYK-LPGHTGSVNESVFHATEPVIGSCSSDKQ 341 (347)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~~~-~~~h~~~v~~~~~~~~~~~l~s~s~D~~ 341 (347)
...... + ...+..++|+|++++|++|+ ||.|++||+.+++++.+ +.+|...|++++|+ +..++++++.|+.
T Consensus 384 -~~~~~~-~----~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~~~~~~~~~~~~~v~~v~~~-~~~l~~~~~~~g~ 455 (464)
T 3v7d_B 384 -RKFSYH-H----TNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLVHANILKDADQIWSVNFK-GKTLVAAVEKDGQ 455 (464)
T ss_dssp -EEEEEE-C----TTCCCEEEEEECSSEEEEEE-TTEEEEEETTTCCEEESCTTTTCSEEEEEEEE-TTEEEEEEEETTE
T ss_pred -eeeeec-C----CCCccEEEEEeCCCEEEEec-CCeEEEEECCCCcEEehhhccCCCcEEEEEec-CCEEEEEEEeCCe
Confidence 111111 1 23466778999999999999 89999999999999875 77899999999998 5567777777887
Q ss_pred EEee
Q 019006 342 IYLG 345 (347)
Q Consensus 342 i~i~ 345 (347)
+.+|
T Consensus 456 ~~i~ 459 (464)
T 3v7d_B 456 SFLE 459 (464)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6654
No 76
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=2.6e-37 Score=270.93 Aligned_cols=253 Identities=21% Similarity=0.364 Sum_probs=199.7
Q ss_pred CeeEecCccccEEEEEECCCCCeEEEeeCCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEE
Q 019006 49 PIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWD 128 (347)
Q Consensus 49 ~~~~~~~h~~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd 128 (347)
+...+.+|...|.+++|+|++.+|++|+.|++|++||+.. ......+.+|...|.+++|+|++++|++++.|++|++||
T Consensus 68 ~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~-~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd 146 (343)
T 2xzm_R 68 PHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRT-GTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWN 146 (343)
T ss_dssp EEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTS-SCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEE
T ss_pred ccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCC-CcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEe
Confidence 4567889999999999999999999999999999999964 345667899999999999999999999999999999999
Q ss_pred CCCCceeeeee---ccCcceeEeecCCCC---------CCEEEEEcCCCceEEEeCCCCCceeec-CCCCceEEEEEcCC
Q 019006 129 VETGKQIKKMA---EHNSFVNSCCPSRRG---------PPLVVSGSDDGTAKLWDMRQRGAIQTF-PDKYQITAVSFSDA 195 (347)
Q Consensus 129 ~~~~~~~~~~~---~~~~~v~~~~~~~~~---------~~~~~s~~~d~~i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~ 195 (347)
+.... ..... .|...+..+.+.+.. ..++++++.|++|++||.. ......+ .+...|.+++|+|+
T Consensus 147 ~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~-~~~~~~~~~h~~~v~~~~~s~~ 224 (343)
T 2xzm_R 147 ILGEC-KFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTN-FQIRYTFKAHESNVNHLSISPN 224 (343)
T ss_dssp SSSCE-EEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETT-TEEEEEEECCSSCEEEEEECTT
T ss_pred ccCCc-eeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCC-CceeEEEcCccccceEEEECCC
Confidence 87433 22222 567778888887764 2589999999999999954 3333333 46678999999999
Q ss_pred CCeEEEEecCCcEEEEeCCCC-ceEEEecCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEeccc--
Q 019006 196 SDKIYTGGIDNDVKVWDLRKG-EVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQ-- 272 (347)
Q Consensus 196 ~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~-- 272 (347)
+++|++|+.||.|++||++.. .....+. +...|.+++|+|++.++++ +.|+.|++||+....... ...+....
T Consensus 225 g~~l~sgs~dg~v~iwd~~~~~~~~~~~~-~~~~v~~v~~sp~~~~la~-~~d~~v~iw~~~~~~~~~--~~~~~~~~~~ 300 (343)
T 2xzm_R 225 GKYIATGGKDKKLLIWDILNLTYPQREFD-AGSTINQIAFNPKLQWVAV-GTDQGVKIFNLMTQSKAP--VCTIEAEPIT 300 (343)
T ss_dssp SSEEEEEETTCEEEEEESSCCSSCSEEEE-CSSCEEEEEECSSSCEEEE-EESSCEEEEESSSCCSCS--EEECCCCSGG
T ss_pred CCEEEEEcCCCeEEEEECCCCcccceeec-CCCcEEEEEECCCCCEEEE-ECCCCEEEEEeCCCCCCc--eEEeecCcch
Confidence 999999999999999999543 3333332 4456999999999987765 458889999987543221 11222100
Q ss_pred -----cccccceEEEEECCCCCEEEEeeCCCeEEEEeCCCc
Q 019006 273 -----HNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSR 308 (347)
Q Consensus 273 -----~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~ 308 (347)
......+.+++|+|+|++|++|+.||.|++|++.++
T Consensus 301 ~~~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~~~g 341 (343)
T 2xzm_R 301 KAEGQKGKNPQCTSLAWNALGKKLFAGFTDGVIRTFSFETS 341 (343)
T ss_dssp GBTTBCCSCCCEEEEEECSSSCCEEEEETTSEEEEEEEEEE
T ss_pred hhhhhcCCCCceEEEEECCCCCeEEEecCCceEEEEEEEcc
Confidence 012356899999999999999999999999998764
No 77
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.1e-37 Score=267.66 Aligned_cols=247 Identities=20% Similarity=0.321 Sum_probs=201.5
Q ss_pred eeeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEECCCC--ceeeee-ec-cCcceeEeecCCCCCCEEEEEcCCCc
Q 019006 91 KNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETG--KQIKKM-AE-HNSFVNSCCPSRRGPPLVVSGSDDGT 166 (347)
Q Consensus 91 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~--~~~~~~-~~-~~~~v~~~~~~~~~~~~~~s~~~d~~ 166 (347)
.....+.+|...|.+++|+++ +|++|+.|++|++||+..+ +....+ .. |...|.++++++.+ .++++|+.|++
T Consensus 5 ~~~~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~-~~las~s~D~~ 81 (330)
T 2hes_X 5 NLIKSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHT-SLLAAGSFDST 81 (330)
T ss_dssp EEEEEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTS-SEEEEEETTSC
T ss_pred ccceeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCC-CEEEEEeCCCc
Confidence 345678899999999999987 9999999999999999875 334444 33 88889999998875 68999999999
Q ss_pred eEEEeCCCC-------Cceeec-CCCCceEEEEEcCCCCeEEEEecCCcEEEEeCCCC----ceEEEecCCCCceeEEEE
Q 019006 167 AKLWDMRQR-------GAIQTF-PDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKG----EVSMTLQGHQDMITGMSL 234 (347)
Q Consensus 167 i~iwd~~~~-------~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~----~~~~~~~~~~~~i~~v~~ 234 (347)
|++||+... .....+ .|...|.+++|+|++++|++|+.|+.|++||++.. +....+.+|...|.+++|
T Consensus 82 v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~ 161 (330)
T 2hes_X 82 VSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIW 161 (330)
T ss_dssp EEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEE
T ss_pred EEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEE
Confidence 999998532 223334 35678999999999999999999999999999532 456778899999999999
Q ss_pred CCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCC--CCEEEEeeCCCeEEEEeCCCc----
Q 019006 235 SPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPD--GSKVTAGSSDRMVYIWDTTSR---- 308 (347)
Q Consensus 235 ~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~--g~~l~sgs~dg~i~vwd~~~~---- 308 (347)
+|++++|++++.|++|++||.+.. ...++..+.+|. ..+.+++|+|+ +.+|++|+.|+.|++||+..+
T Consensus 162 ~p~~~~l~s~s~D~~i~iW~~~~~--~~~~~~~~~~h~----~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~ 235 (330)
T 2hes_X 162 HPSEALLASSSYDDTVRIWKDYDD--DWECVAVLNGHE----GTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDD 235 (330)
T ss_dssp CSSSSEEEEEETTSCEEEEEEETT--EEEEEEEECCCS----SCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTS
T ss_pred CCCCCEEEEEcCCCeEEEEECCCC--CeeEEEEccCCC----CcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccc
Confidence 999999999999999999998632 224556666664 57899999999 779999999999999998765
Q ss_pred ----eeeEEecC-CccCeeeEEEcCCCCEEEEecCCCcEEeecC
Q 019006 309 ----RILYKLPG-HTGSVNESVFHATEPVIGSCSSDKQIYLGEI 347 (347)
Q Consensus 309 ----~~~~~~~~-h~~~v~~~~~~~~~~~l~s~s~D~~i~i~~~ 347 (347)
..+..+.+ |...|.+++|++++ +|++++.||+|+|||+
T Consensus 236 ~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~ 278 (330)
T 2hes_X 236 QQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEE 278 (330)
T ss_dssp CEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEE
T ss_pred cceeEEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEc
Confidence 34555665 99999999999665 8999999999999973
No 78
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=1.2e-37 Score=278.94 Aligned_cols=280 Identities=20% Similarity=0.268 Sum_probs=231.9
Q ss_pred EEEEEECCCCCe-EEEeeCCCcEEEEeccCCCe---eeEEEeCcccceeEEEEcC-CCCEEEEecCCCeEEEEECCCC--
Q 019006 60 VYTMKFNPAGTV-IASGSHDRDIFLWHVHGDCK---NFMVLKGHKNAILDLHWTT-DGSQIISASPDKTLRAWDVETG-- 132 (347)
Q Consensus 60 V~~v~~~~~~~~-l~s~~~d~~v~~w~~~~~~~---~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~-- 132 (347)
...++++|+... +++++.||.|++|++..... ....+.+|...|.+++|+| ++++|++|+.||.|++||+.++
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~ 116 (402)
T 2aq5_A 37 SGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGL 116 (402)
T ss_dssp SCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCC
T ss_pred CCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCC
Confidence 345788887754 45689999999999854322 2345779999999999999 8999999999999999999887
Q ss_pred -----ceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeec---CCCCceEEEEEcCCCCeEEEEec
Q 019006 133 -----KQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTF---PDKYQITAVSFSDASDKIYTGGI 204 (347)
Q Consensus 133 -----~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~ 204 (347)
+.+..+..|...+..+++++.+..++++++.|++|++||++++..+..+ .+...+.+++|+|++..|++++.
T Consensus 117 ~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 196 (402)
T 2aq5_A 117 VLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCR 196 (402)
T ss_dssp SSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEET
T ss_pred ccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEec
Confidence 5567788899999999999987779999999999999999998887776 35678999999999999999999
Q ss_pred CCcEEEEeCCCCceEEEe-cCCCCc-eeEEEECCCCCEEEEE---cCCCcEEEEeCCCCCCcCceeEEEeccccccccce
Q 019006 205 DNDVKVWDLRKGEVSMTL-QGHQDM-ITGMSLSPDGSYLLTN---GMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNL 279 (347)
Q Consensus 205 dg~i~iwd~~~~~~~~~~-~~~~~~-i~~v~~~~~~~~l~t~---~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (347)
||.|++||+++++....+ ..|... +.++.|+|++++|+++ +.|+.|++||++..... ...... .....+
T Consensus 197 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~---~~~~~~---~~~~~v 270 (402)
T 2aq5_A 197 DKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEP---LSLQEL---DTSSGV 270 (402)
T ss_dssp TSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSC---SEEEEC---CCCSSC
T ss_pred CCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCC---ceEEec---cCCCce
Confidence 999999999999988888 788765 8999999999999999 79999999999864321 112211 113468
Q ss_pred EEEEECCCCCEEE-EeeCCCeEEEEeCCCcee-eEEecC--CccCeeeEEEcCCCCEEEEecCCCcEEeecC
Q 019006 280 LKCGWSPDGSKVT-AGSSDRMVYIWDTTSRRI-LYKLPG--HTGSVNESVFHATEPVIGSCSSDKQIYLGEI 347 (347)
Q Consensus 280 ~~~~~s~~g~~l~-sgs~dg~i~vwd~~~~~~-~~~~~~--h~~~v~~~~~~~~~~~l~s~s~D~~i~i~~~ 347 (347)
..++|+|++++|+ +|+.||.|++||+.+++. +..+.. |...|.+++|+|++.++++ .|+.+++|++
T Consensus 271 ~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s--~~~~~~~~~l 340 (402)
T 2aq5_A 271 LLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVN--KCEIARFYKL 340 (402)
T ss_dssp EEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCGG--GTEEEEEEEE
T ss_pred eEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEeccccccee--cceeEEEEEc
Confidence 8999999999996 566899999999998874 444444 5689999999999998865 5668999874
No 79
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=3.6e-37 Score=312.13 Aligned_cols=293 Identities=23% Similarity=0.384 Sum_probs=236.0
Q ss_pred CeeEecCccccEEEEEECCCCCeEEEeeCCCcEEEEeccCCCeeeEEEeCcccceeEEEEcC--CCCEEEEecCCCeEEE
Q 019006 49 PIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTT--DGSQIISASPDKTLRA 126 (347)
Q Consensus 49 ~~~~~~~h~~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~--~~~~l~s~~~dg~i~i 126 (347)
.+..+.+|.+.|.+++|+|++++||+|+.|+.|++||+.. ......+.+|...|.+++|+| ++..+++++.|+.|++
T Consensus 649 ~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~v 727 (1249)
T 3sfz_A 649 KLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSAT-GKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKL 727 (1249)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT-CCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEE
T ss_pred EEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCC-CceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEE
Confidence 3567889999999999999999999999999999999964 456677889999999999999 4568999999999999
Q ss_pred EECCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeec-------------------------
Q 019006 127 WDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTF------------------------- 181 (347)
Q Consensus 127 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~------------------------- 181 (347)
||+.+++.+..+..|...+..+++++++ .++++++.||+|++||++++.....+
T Consensus 728 wd~~~~~~~~~~~~h~~~v~~~~~sp~~-~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 806 (1249)
T 3sfz_A 728 WDLNQKECRNTMFGHTNSVNHCRFSPDD-ELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSW 806 (1249)
T ss_dssp EETTSSSEEEEECCCSSCEEEEEECSST-TEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCB
T ss_pred EECCCcchhheecCCCCCEEEEEEecCC-CEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEE
Confidence 9999999999999999999999998865 58899999999999998755322111
Q ss_pred -------------------------------CCCCceEEEEEcCCCCeEEEEecCCcEEEEeCCCCceEEEecCCCCcee
Q 019006 182 -------------------------------PDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMIT 230 (347)
Q Consensus 182 -------------------------------~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~ 230 (347)
.+...+.+++|+|++..+++++.||.|++||+.++.....+.+|...|.
T Consensus 807 s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~ 886 (1249)
T 3sfz_A 807 SADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVH 886 (1249)
T ss_dssp CTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEE
T ss_pred CCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceE
Confidence 2345678899999999999999999999999999999999999999999
Q ss_pred EEEECCCCCEEEEEcCCCcEEEEeCCCCC---------------------------------------------------
Q 019006 231 GMSLSPDGSYLLTNGMDCKLCIWDMRPYA--------------------------------------------------- 259 (347)
Q Consensus 231 ~v~~~~~~~~l~t~~~d~~i~~wd~~~~~--------------------------------------------------- 259 (347)
+++|+|+++++++++.|+.|++||+....
T Consensus 887 ~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 966 (1249)
T 3sfz_A 887 GVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSC 966 (1249)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEE
T ss_pred EEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEE
Confidence 99999999999999999999999964200
Q ss_pred ----Cc--------------------CceeEEEeccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCCce------
Q 019006 260 ----PQ--------------------NRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRR------ 309 (347)
Q Consensus 260 ----~~--------------------~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~------ 309 (347)
+. ......+.+ ....+.+++|+|+|++|++++.||.|++||+.+++
T Consensus 967 ~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~----h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~~~~~~ 1042 (1249)
T 3sfz_A 967 CCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVG----HKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDYVFLQA 1042 (1249)
T ss_dssp EEECTTSSEEEEEETTSCCEEEETTTTSCEEECCC----CSSCCCCEEECSSSSCEEEECSSSBEEEEETTTTEEECCBC
T ss_pred EEEcCCCCEEEEEcCCCCEEEEEcCCCceeeeccc----CCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCceEEEec
Confidence 00 000111111 23457778899999888888888888877766544
Q ss_pred ----------------------------------eeEEecCCccCeeeEEEcCCCCEEEEecCCCcEEeecC
Q 019006 310 ----------------------------------ILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGEI 347 (347)
Q Consensus 310 ----------------------------------~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~i~~~ 347 (347)
.+..+.+|.+.|.+++|+|+++++++++.|++|++||+
T Consensus 1043 ~~~~v~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~s~s~d~~v~iwd~ 1114 (1249)
T 3sfz_A 1043 HQETVKDFRLLQDSRLLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSF 1114 (1249)
T ss_dssp CSSCEEEEEECSSSEEEEEESSSEEEEEETTTTCCCEEEECCSSCCCCEEECSSSSSCEEECCSSCCCEECS
T ss_pred CCCcEEEEEEcCCCcEEEEECCCcEEEEECCCCceeEEEcccCCcEEEEEECCCCCEEEEEcCCCcEEEEEC
Confidence 33445566666777777777777777777777777763
No 80
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.5e-37 Score=272.78 Aligned_cols=250 Identities=21% Similarity=0.322 Sum_probs=213.0
Q ss_pred EEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEECC--CCceeeeeeccCcceeEeecCCC-CCCEEEEEcCCCceEEE
Q 019006 94 MVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVE--TGKQIKKMAEHNSFVNSCCPSRR-GPPLVVSGSDDGTAKLW 170 (347)
Q Consensus 94 ~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~--~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~s~~~d~~i~iw 170 (347)
..+.+|...|.+++|+|++++|++++.||.|++||+. +++.+..+..|...|.++++.++ ...++++++.|+.|++|
T Consensus 5 ~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw 84 (379)
T 3jrp_A 5 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIW 84 (379)
T ss_dssp CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEE
T ss_pred EEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEE
Confidence 4578999999999999999999999999999999997 55667778889999999988755 25689999999999999
Q ss_pred eCCCCC--ceeecC-CCCceEEEEEcCC--CCeEEEEecCCcEEEEeCCCCc--eEEEecCCCCceeEEEECC-------
Q 019006 171 DMRQRG--AIQTFP-DKYQITAVSFSDA--SDKIYTGGIDNDVKVWDLRKGE--VSMTLQGHQDMITGMSLSP------- 236 (347)
Q Consensus 171 d~~~~~--~~~~~~-~~~~v~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~~~~~i~~v~~~~------- 236 (347)
|+.++. .+..+. +...+.+++|+|+ +..+++++.|+.|++||++... ....+..|...|.+++|+|
T Consensus 85 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 164 (379)
T 3jrp_A 85 KEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDG 164 (379)
T ss_dssp EEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC-----
T ss_pred EcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccc
Confidence 998875 444443 5678999999999 8999999999999999998773 4456778999999999999
Q ss_pred ------CCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCC---CCEEEEeeCCCeEEEEeCCC
Q 019006 237 ------DGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPD---GSKVTAGSSDRMVYIWDTTS 307 (347)
Q Consensus 237 ------~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~---g~~l~sgs~dg~i~vwd~~~ 307 (347)
+++++++++.|+.|++||++...........+.+| ...+.+++|+|+ +.+|++++.||.|++||+.+
T Consensus 165 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h----~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~ 240 (379)
T 3jrp_A 165 EHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGH----SDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDN 240 (379)
T ss_dssp -----CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCC----SSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESS
T ss_pred cccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecc----cCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCC
Confidence 69999999999999999998654433444555554 357899999999 89999999999999999988
Q ss_pred ce-----eeEEecCCccCeeeEEEcCCCCEEEEecCCCcEEeecC
Q 019006 308 RR-----ILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGEI 347 (347)
Q Consensus 308 ~~-----~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~i~~~ 347 (347)
+. .+.....|...|.+++|+|++++|++++.||.|++|++
T Consensus 241 ~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~ 285 (379)
T 3jrp_A 241 EQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKE 285 (379)
T ss_dssp TTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEE
T ss_pred CCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeC
Confidence 63 22233458899999999999999999999999999984
No 81
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-36 Score=296.90 Aligned_cols=200 Identities=11% Similarity=0.164 Sum_probs=170.7
Q ss_pred EecCccccEEEEEECCCCCeEEEeeCCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEECCC
Q 019006 52 LLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVET 131 (347)
Q Consensus 52 ~~~~h~~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 131 (347)
...||.+.|++++|+|++++||+|+.||+|++|+..+. .. .....|...|.+++|+| +++|++++.|++|++||+.+
T Consensus 12 ~~~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~-~~-~~~~~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~ 88 (902)
T 2oaj_A 12 NKYGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQV-EV-VIKLEDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYS 88 (902)
T ss_dssp EEEECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTC-EE-EEECSSCCCEEEEEEET-TTEEEEEETTCEEEEEETTT
T ss_pred cccCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCc-EE-EEEcCCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCC
Confidence 34589999999999999999999999999999998542 22 23345788999999999 88999999999999999999
Q ss_pred CceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCcee-----------e-cCCCCceEEEEEcCC-CCe
Q 019006 132 GKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQ-----------T-FPDKYQITAVSFSDA-SDK 198 (347)
Q Consensus 132 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~-----------~-~~~~~~v~~~~~~~~-~~~ 198 (347)
++.+..+. +...+.++++++.+ .++++|+.||+|++||++++.... . ..+...|.+++|+|+ +..
T Consensus 89 ~~~~~~~~-~~~~V~~v~~sp~g-~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~ 166 (902)
T 2oaj_A 89 QKVLTTVF-VPGKITSIDTDASL-DWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGT 166 (902)
T ss_dssp CSEEEEEE-CSSCEEEEECCTTC-SEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEE
T ss_pred CcEEEEEc-CCCCEEEEEECCCC-CEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCE
Confidence 98887775 56778888888765 588999999999999998766421 1 124568999999996 468
Q ss_pred EEEEecCCcEEEEeCCCCceEEEecCC------------------CCceeEEEECCCCCEEEEEcCCCcEEEEeCCC
Q 019006 199 IYTGGIDNDVKVWDLRKGEVSMTLQGH------------------QDMITGMSLSPDGSYLLTNGMDCKLCIWDMRP 257 (347)
Q Consensus 199 l~~~~~dg~i~iwd~~~~~~~~~~~~~------------------~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~ 257 (347)
+++|+.||.| +||+++++....+..| ...|++++|+|+|++|++++.|+.|++||++.
T Consensus 167 l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~ 242 (902)
T 2oaj_A 167 VLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANS 242 (902)
T ss_dssp EEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTT
T ss_pred EEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCC
Confidence 8999999999 9999999888877765 46799999999999999999999999999875
No 82
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.4e-38 Score=289.17 Aligned_cols=261 Identities=12% Similarity=0.052 Sum_probs=198.0
Q ss_pred ccccEEEEEECCCC---------CeEEEeeCCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEE
Q 019006 56 HQSAVYTMKFNPAG---------TVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRA 126 (347)
Q Consensus 56 h~~~V~~v~~~~~~---------~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~i 126 (347)
+.+.|.+|+|+|++ ++||+|+.++.. -..+|+++.+++++.|++|+|
T Consensus 132 ~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~------------------------~~~~~~~~~laS~s~D~tI~i 187 (524)
T 2j04_B 132 VGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMD------------------------EPLNEHLEMFDKEKHSSCIQI 187 (524)
T ss_dssp CCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------------------------------CEEEEE
T ss_pred CCCceeEEEecccCCCCccCcCCeEEEEEEecccC------------------------CccchhhhhhccCCCCceEEE
Confidence 57788999999876 788888765420 013688899999999999999
Q ss_pred EECCCCcee----eeeeccCcceeEeecCCC-----CCCEEEEEcCCCceEEEeCCCCCce-----------eec-CCCC
Q 019006 127 WDVETGKQI----KKMAEHNSFVNSCCPSRR-----GPPLVVSGSDDGTAKLWDMRQRGAI-----------QTF-PDKY 185 (347)
Q Consensus 127 wd~~~~~~~----~~~~~~~~~v~~~~~~~~-----~~~~~~s~~~d~~i~iwd~~~~~~~-----------~~~-~~~~ 185 (347)
||+.+++.. ..+..|...|..+++++. ...+|++++.||+|++||+..+... ..+ .+..
T Consensus 188 Wd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~ 267 (524)
T 2j04_B 188 FKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADS 267 (524)
T ss_dssp EEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTT
T ss_pred EEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCC
Confidence 999876542 235566778888998875 2468999999999999999765321 122 3456
Q ss_pred ceEEEEEcCCCCeEEEEecCCcEEEEeCCCCc-eEEEecCCCCceeEE--EECCCC-CEEEEEcCCCcEEEEeCCCCCCc
Q 019006 186 QITAVSFSDASDKIYTGGIDNDVKVWDLRKGE-VSMTLQGHQDMITGM--SLSPDG-SYLLTNGMDCKLCIWDMRPYAPQ 261 (347)
Q Consensus 186 ~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~-~~~~~~~~~~~i~~v--~~~~~~-~~l~t~~~d~~i~~wd~~~~~~~ 261 (347)
.+.+++|+++ ..|++|+.||+|++||++++. ....+.+|...|+++ +|+|++ ++|+|++.|++|+|||++..
T Consensus 268 ~v~sv~~s~~-~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~--- 343 (524)
T 2j04_B 268 LITTFDFLSP-TTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDI--- 343 (524)
T ss_dssp CEEEEEESSS-SEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGH---
T ss_pred CEEEEEecCC-CeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCC---
Confidence 8999999985 589999999999999998764 445688999999999 578887 89999999999999999742
Q ss_pred CceeEEEeccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCCceeeEEecCCccCeeeEEEcCCCCEEEEecCCCc
Q 019006 262 NRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQ 341 (347)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~ 341 (347)
.+...+.+|.. ...+.+++|+|+++.|++++.|+.|++||++++.++..+.+|.+.|++++|+|++++|++++.|++
T Consensus 344 -~~~~~~~~~~~--~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgt 420 (524)
T 2j04_B 344 -ATTKTTVSRFR--GSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGS 420 (524)
T ss_dssp -HHHCEEEEECS--CCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTE
T ss_pred -Ccccccccccc--cCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECCCE
Confidence 33333444321 123678899999999999999999999999999888889999999999999999999999999999
Q ss_pred EEeecC
Q 019006 342 IYLGEI 347 (347)
Q Consensus 342 i~i~~~ 347 (347)
|++|++
T Consensus 421 v~lwd~ 426 (524)
T 2j04_B 421 LIITNA 426 (524)
T ss_dssp EECCBS
T ss_pred EEEEec
Confidence 999984
No 83
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=2.2e-35 Score=259.82 Aligned_cols=278 Identities=12% Similarity=0.176 Sum_probs=208.3
Q ss_pred CeeEecCccccEEEEEECCCCCeEEEeeCCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEE-EEecCCCeEEEE
Q 019006 49 PIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQI-ISASPDKTLRAW 127 (347)
Q Consensus 49 ~~~~~~~h~~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~s~~~dg~i~iw 127 (347)
++..+.+|...|++++|+|+|++||+|+.|+ +++|+... ...... .+...+..+++.++++.+ ++++.|++|++|
T Consensus 11 ~~~~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iW 86 (355)
T 3vu4_A 11 PIVPENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHP-VAHIMS--QEMRHLSKVRMLHRTNYVAFVTGVKEVVHIW 86 (355)
T ss_dssp --------CCCCCEEEECTTSSEEEEECSSE-EEEEEETT-EEEEEE--EECSCCCEEEECTTSSEEEEECSSTTEEEEE
T ss_pred CccccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCC-cceeee--eecCCeEEEEEcCCCCEEEEEECCccEEEEE
Confidence 3445678999999999999999999998876 78999853 222222 222357888899888877 567888999999
Q ss_pred ECCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCC-CceeecCCCCceEEEEEcCCCCeEEE--Eec
Q 019006 128 DVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQR-GAIQTFPDKYQITAVSFSDASDKIYT--GGI 204 (347)
Q Consensus 128 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~--~~~ 204 (347)
|..+++.+..+. +...+..+.+.+. .++.+ .|+.|++||+.+. +.+..+.. ....+++++ ..++. |+.
T Consensus 87 d~~~~~~~~~~~-~~~~v~~v~~~~~---~~~~~-~~~~i~i~d~~~~~~~~~~~~~--~~~~~~~s~--~~la~~sg~~ 157 (355)
T 3vu4_A 87 DDVKKQDVSRIK-VDAPVKDLFLSRE---FIVVS-YGDVISVFKFGNPWKRITDDIR--FGGVCEFSN--GLLVYSNEFN 157 (355)
T ss_dssp ETTTTEEEEEEE-CSSCEEEEEECSS---EEEEE-ETTEEEEEESSTTCCBSSCCEE--EEEEEEEET--TEEEEEESSC
T ss_pred ECCCCcEEEEEE-CCCceEEEEEcCC---EEEEE-EcCEEEEEECCCCceeeEEecc--CCceEEEEc--cEEEEeCCCc
Confidence 999998888775 5567777777653 34433 4789999999887 55555444 444556666 56665 689
Q ss_pred CCcEEEEeCCCCc----------------eEEEecCCCCceeEEEECCCCCEEEEEcCCCc-EEEEeCCCCCCcCceeEE
Q 019006 205 DNDVKVWDLRKGE----------------VSMTLQGHQDMITGMSLSPDGSYLLTNGMDCK-LCIWDMRPYAPQNRCVKI 267 (347)
Q Consensus 205 dg~i~iwd~~~~~----------------~~~~~~~~~~~i~~v~~~~~~~~l~t~~~d~~-i~~wd~~~~~~~~~~~~~ 267 (347)
||.|++||++++. ....+.+|...|++++|+|++++|++++.|++ |++||++. ..++..
T Consensus 158 ~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~----~~~~~~ 233 (355)
T 3vu4_A 158 LGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTED----GVLVRE 233 (355)
T ss_dssp TTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTT----CCEEEE
T ss_pred CcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCC----CcEEEE
Confidence 9999999998765 26778999999999999999999999999998 99999984 345555
Q ss_pred Ee-c-cccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCCceee--EEec---------------------CCccCee
Q 019006 268 LE-G-HQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRIL--YKLP---------------------GHTGSVN 322 (347)
Q Consensus 268 ~~-~-~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~--~~~~---------------------~h~~~v~ 322 (347)
+. + | ...+.+++|+|+|++|++|+.|+.|++||+..+... ..+. .+.....
T Consensus 234 ~~~g~h----~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (355)
T 3vu4_A 234 FRRGLD----RADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGC 309 (355)
T ss_dssp EECTTC----CSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCC
T ss_pred EEcCCC----CCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCce
Confidence 65 3 3 357999999999999999999999999998764311 1111 1122346
Q ss_pred eEEEcCCCCEEEEecCCCcEEeecC
Q 019006 323 ESVFHATEPVIGSCSSDKQIYLGEI 347 (347)
Q Consensus 323 ~~~~~~~~~~l~s~s~D~~i~i~~~ 347 (347)
.++|+++++.+++++.||.+++|++
T Consensus 310 ~~a~~~d~~~l~~~~~dg~~~~~~~ 334 (355)
T 3vu4_A 310 KIAWISESSLVVVWPHTRMIETFKV 334 (355)
T ss_dssp EEEESSSSEEEEEETTTTEEEEEEE
T ss_pred EEEEeCCCCEEEEEeCCCeEEEEEE
Confidence 7899999999999999999999874
No 84
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=1.4e-35 Score=288.14 Aligned_cols=288 Identities=18% Similarity=0.253 Sum_probs=241.2
Q ss_pred CeeEecCccccEEEEEECCCCCeEEEeeCCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEE
Q 019006 49 PIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWD 128 (347)
Q Consensus 49 ~~~~~~~h~~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd 128 (347)
.+..+.+|.+.|.+++|+|++++|++|+.||.|++|++.. ......+.+|...|.+++|+|++.+|++++.||.|++||
T Consensus 47 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~-~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~ 125 (814)
T 3mkq_A 47 EVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNT-GEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWN 125 (814)
T ss_dssp EEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTT-CCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEE
T ss_pred eEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCC-CcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEE
Confidence 4567789999999999999999999999999999999864 355667889999999999999999999999999999999
Q ss_pred CCCC-ceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeecC--CCCceEEEEEcC--CCCeEEEEe
Q 019006 129 VETG-KQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFP--DKYQITAVSFSD--ASDKIYTGG 203 (347)
Q Consensus 129 ~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~--~~~~v~~~~~~~--~~~~l~~~~ 203 (347)
+.++ .....+..|...+..+++++.+..++++++.|++|++||+..+.....+. +...+.+++|+| ++..+++++
T Consensus 126 ~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~ 205 (814)
T 3mkq_A 126 WENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITAS 205 (814)
T ss_dssp GGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEEC
T ss_pred CCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEe
Confidence 9887 55667778889999999988556789999999999999998776655543 236799999999 899999999
Q ss_pred cCCcEEEEeCCCCceEEEecCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEeccccccccceEEEE
Q 019006 204 IDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCG 283 (347)
Q Consensus 204 ~dg~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (347)
.||.|++||+++++....+.+|...|.+++|+|+++++++++.||.|++||+... .....+..+ ...+.+++
T Consensus 206 ~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~----~~~~~~~~~----~~~v~~~~ 277 (814)
T 3mkq_A 206 DDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTY----KVEKTLNVG----LERSWCIA 277 (814)
T ss_dssp TTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTC----SEEEEECCS----SSSEEEEE
T ss_pred CCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCC----cEEEEeecC----CCcEEEEE
Confidence 9999999999999999999999999999999999999999999999999998743 344455443 35789999
Q ss_pred ECCCCC--EEEEeeCCCeEEEEeCCCcee----------e---------------------------------EEecCCc
Q 019006 284 WSPDGS--KVTAGSSDRMVYIWDTTSRRI----------L---------------------------------YKLPGHT 318 (347)
Q Consensus 284 ~s~~g~--~l~sgs~dg~i~vwd~~~~~~----------~---------------------------------~~~~~h~ 318 (347)
|+|+|. ++++|+ ++.+.+|++..... + ..+..|.
T Consensus 278 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (814)
T 3mkq_A 278 THPTGRKNYIASGF-DNGFTVLSLGNDEPTLSLDPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQDEPLSLQTKELGSVD 356 (814)
T ss_dssp ECTTCGGGEEEEEE-TTEEEEEECSCCSCCEEECSSSEEEEECCTTSCTTCEEEEECCSCCCCCSSSCBCCCCEEECCCS
T ss_pred EccCCCceEEEEEe-CCCEEEEEcCCCCceeEECCCCCEEEECcccccceeeeeeecccccccccCccceeeeecCCCCc
Confidence 999987 455555 55688887654221 1 1223455
Q ss_pred cCeeeEEEcCCCCEEEEecCCCcEEeecC
Q 019006 319 GSVNESVFHATEPVIGSCSSDKQIYLGEI 347 (347)
Q Consensus 319 ~~v~~~~~~~~~~~l~s~s~D~~i~i~~~ 347 (347)
..+..++|+|+++++++++ |+.+++|++
T Consensus 357 ~~~~~~~~spdg~~la~~~-~~~~~i~~~ 384 (814)
T 3mkq_A 357 VFPQSLAHSPNGRFVTVVG-DGEYVIYTA 384 (814)
T ss_dssp SCCSEEEECTTSSEEEEEE-TTEEEEEET
T ss_pred cCCceeEECCCCCEEEEec-CCEEEEEEC
Confidence 6788999999999999888 899999874
No 85
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=1.2e-35 Score=262.62 Aligned_cols=246 Identities=16% Similarity=0.161 Sum_probs=212.2
Q ss_pred EeCcccceeEEEEcCCCCEEEEecCCCeEEEEECCCCc--eeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCC
Q 019006 96 LKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGK--QIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMR 173 (347)
Q Consensus 96 ~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~ 173 (347)
+..|..+|.+++|+|++++|++++.|+.|++||+.+++ .+..+..|...+..+++++.+ .++++++.|+.|++||+.
T Consensus 4 ~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~~~~~dg~i~vwd~~ 82 (372)
T 1k8k_C 4 HSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDS-NRIVTCGTDRNAYVWTLK 82 (372)
T ss_dssp EESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTT-TEEEEEETTSCEEEEEEE
T ss_pred ecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCC-CEEEEEcCCCeEEEEECC
Confidence 45688999999999999999999999999999999887 778888899999999998754 688999999999999998
Q ss_pred CCCceee---cCCCCceEEEEEcCCCCeEEEEecCCcEEEEeCCCCce----EEEecCCCCceeEEEECCCCCEEEEEcC
Q 019006 174 QRGAIQT---FPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEV----SMTLQGHQDMITGMSLSPDGSYLLTNGM 246 (347)
Q Consensus 174 ~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~----~~~~~~~~~~i~~v~~~~~~~~l~t~~~ 246 (347)
++..... ..+...+.+++|+|+++++++++.|+.|++||++.+.. ......|...|.+++|+|+++++++++.
T Consensus 83 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 162 (372)
T 1k8k_C 83 GRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSC 162 (372)
T ss_dssp TTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEET
T ss_pred CCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcC
Confidence 7764333 34667899999999999999999999999999987762 2333678889999999999999999999
Q ss_pred CCcEEEEeCCCCC--------------CcCceeEEEeccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCCceeeE
Q 019006 247 DCKLCIWDMRPYA--------------PQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILY 312 (347)
Q Consensus 247 d~~i~~wd~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~~ 312 (347)
|+.|++||++... +...++..+..| ...+.+++|+|++++|++++.||.|++||+.+++.+.
T Consensus 163 dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~ 238 (372)
T 1k8k_C 163 DFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSS----CGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVA 238 (372)
T ss_dssp TSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCC----SSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEE
T ss_pred CCCEEEEEcccccccccccccccccccchhhheEecCCC----CCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeE
Confidence 9999999975211 123444445443 3578999999999999999999999999999999999
Q ss_pred EecCCccCeeeEEEcCCCCEEEEecCCCcEEeecC
Q 019006 313 KLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGEI 347 (347)
Q Consensus 313 ~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~i~~~ 347 (347)
.+.+|...|..++|+|++.+++++ .|+.|++|++
T Consensus 239 ~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~ 272 (372)
T 1k8k_C 239 TLASETLPLLAVTFITESSLVAAG-HDCFPVLFTY 272 (372)
T ss_dssp EEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEE
T ss_pred EEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEc
Confidence 999999999999999999988877 9999999984
No 86
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=2.9e-36 Score=265.64 Aligned_cols=245 Identities=22% Similarity=0.301 Sum_probs=209.2
Q ss_pred ccccEEEEEECCC----CCeEEEeeCCCcEEEEeccCCCeeeEEEeCcccceeEEEEcC-CCCEEEEecCCCeEEEEECC
Q 019006 56 HQSAVYTMKFNPA----GTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTT-DGSQIISASPDKTLRAWDVE 130 (347)
Q Consensus 56 h~~~V~~v~~~~~----~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~ 130 (347)
|...|++++|+|+ +.+|++|+.||.|++|++.. .+....+.+|...|.+++|+| ++.+|++++.||.|++||+.
T Consensus 68 ~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~ 146 (366)
T 3k26_A 68 ADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPIT-MQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQ 146 (366)
T ss_dssp TTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTT-CCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETT
T ss_pred CCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchh-ceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEee
Confidence 6688999999998 67999999999999999864 355667889999999999999 89999999999999999999
Q ss_pred CCceeeee---eccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeecC-------------------------
Q 019006 131 TGKQIKKM---AEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFP------------------------- 182 (347)
Q Consensus 131 ~~~~~~~~---~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~------------------------- 182 (347)
+++.+..+ ..|...+..+++++.+ .++++++.|+.|++||++++.....+.
T Consensus 147 ~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (366)
T 3k26_A 147 TDTLVAIFGGVEGHRDEVLSADYDLLG-EKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFS 225 (366)
T ss_dssp TTEEEEEECSTTSCSSCEEEEEECTTS-SEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEE
T ss_pred cCeEEEEecccccccCceeEEEECCCC-CEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccc
Confidence 99888777 6788899999998865 588999999999999998765443222
Q ss_pred ----CCCceEEEEEcCCCCeEEEEecCCcEEEEeCCCCce--------------EEEecCCCCceeEEEECCC--CCEEE
Q 019006 183 ----DKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEV--------------SMTLQGHQDMITGMSLSPD--GSYLL 242 (347)
Q Consensus 183 ----~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~--------------~~~~~~~~~~i~~v~~~~~--~~~l~ 242 (347)
+...|.+++|+ ++++++++.|+.|++||++++.. ...+..|...|++++|+|+ +++|+
T Consensus 226 ~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~ 303 (366)
T 3k26_A 226 TRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLA 303 (366)
T ss_dssp ECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEE
T ss_pred cccCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEE
Confidence 56679999998 67999999999999999987643 6678889999999999999 99999
Q ss_pred EEcCCCcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCC
Q 019006 243 TNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTT 306 (347)
Q Consensus 243 t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~ 306 (347)
+++.||.|++||+............+..|.+ ...+.+++|+|++++|++|+.||.|++||+.
T Consensus 304 ~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~--~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 304 LGNQVGKLYVWDLEVEDPHKAKCTTLTHHKC--GAAIRQTSFSRDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp EECTTSCEEEEECCSSSGGGCEEEEECCTTC--CSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred EEecCCcEEEEECCCCCCccccceEEccccc--CCceEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence 9999999999999865544434445655532 3679999999999999999999999999975
No 87
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=1.6e-35 Score=263.29 Aligned_cols=249 Identities=14% Similarity=0.187 Sum_probs=208.4
Q ss_pred eeeEEEeCcccceeEEEEcCCC-CEEEEecCCCeEEEEECCCCceeeeee--ccCcceeEeecCCCCCCEEEEEcCCCce
Q 019006 91 KNFMVLKGHKNAILDLHWTTDG-SQIISASPDKTLRAWDVETGKQIKKMA--EHNSFVNSCCPSRRGPPLVVSGSDDGTA 167 (347)
Q Consensus 91 ~~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~s~~~d~~i 167 (347)
.....+.+|...|.+++|+|++ ++|++|+.||.|++||+.+++....+. .|...|.++++++.+..++++++.|+.|
T Consensus 64 ~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i 143 (383)
T 3ei3_B 64 KLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGAT 143 (383)
T ss_dssp EEEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEE
T ss_pred ceEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEE
Confidence 3455678999999999999998 899999999999999999887766654 5888999999988666789999999999
Q ss_pred EEEeCCCCCceeecCC---CCceEEEEEcCCCCeEEEEecCCcEEEEeCCCCceEEEecCCCCceeEEEECCCCC-EEEE
Q 019006 168 KLWDMRQRGAIQTFPD---KYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGS-YLLT 243 (347)
Q Consensus 168 ~iwd~~~~~~~~~~~~---~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~-~l~t 243 (347)
++||++.........+ ...+.+++|+|++..+++++.|+.|++||+ .++....+.+|...|.+++|+|+++ ++++
T Consensus 144 ~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s 222 (383)
T 3ei3_B 144 TLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCDWLMAT 222 (383)
T ss_dssp EEEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECSSCTTEEEE
T ss_pred EEEECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCCCCCEEEE
Confidence 9999986433222222 356999999999999999999999999999 5778888999999999999999999 9999
Q ss_pred EcCCCcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECC-CCCEEEEeeCCCeEEEEeCCCceeeEEecCCc----
Q 019006 244 NGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSP-DGSKVTAGSSDRMVYIWDTTSRRILYKLPGHT---- 318 (347)
Q Consensus 244 ~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-~g~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~---- 318 (347)
++.|+.|++||++.......+...+ .| ...+.+++|+| ++.+|++++.|+.|++||+.+++.+..+.+|.
T Consensus 223 ~~~d~~i~iwd~~~~~~~~~~~~~~-~~----~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~ 297 (383)
T 3ei3_B 223 SSVDATVKLWDLRNIKDKNSYIAEM-PH----EKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQF 297 (383)
T ss_dssp EETTSEEEEEEGGGCCSTTCEEEEE-EC----SSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCC
T ss_pred EeCCCEEEEEeCCCCCcccceEEEe-cC----CCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCcccccccccccccc
Confidence 9999999999998755444555544 23 45799999999 99999999999999999999988777776554
Q ss_pred -------------cCeeeEEEcCCCCEEEEecCCCcEEeecC
Q 019006 319 -------------GSVNESVFHATEPVIGSCSSDKQIYLGEI 347 (347)
Q Consensus 319 -------------~~v~~~~~~~~~~~l~s~s~D~~i~i~~~ 347 (347)
+.+..++|+|++++ +++.|+.|++||+
T Consensus 298 ~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~ 337 (383)
T 3ei3_B 298 QHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDA 337 (383)
T ss_dssp TTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEET
T ss_pred ccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEec
Confidence 23344667777766 8889999999985
No 88
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=3.3e-36 Score=264.54 Aligned_cols=252 Identities=18% Similarity=0.313 Sum_probs=206.9
Q ss_pred cCccccEEEEEECCC---CCeEEEeeCCCcEEEEeccCCCeeeEEEeCcccceeEEEE------cCCCCEEEEecCCCeE
Q 019006 54 TGHQSAVYTMKFNPA---GTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHW------TTDGSQIISASPDKTL 124 (347)
Q Consensus 54 ~~h~~~V~~v~~~~~---~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~------~~~~~~l~s~~~dg~i 124 (347)
.+|...|.+++|+|+ +.+|++|+.||.|++|++.........+.+|...|.++.| +|++++|++++.||.|
T Consensus 62 ~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i 141 (357)
T 3i2n_A 62 IEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTV 141 (357)
T ss_dssp EEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCE
T ss_pred ecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeE
Confidence 479999999999998 6999999999999999997544356778899999999955 6789999999999999
Q ss_pred EEEECCCCc-eeeeeeccCc----ceeEee----cCCCCCCEEEEEcCCCceEEEeCCCCCceeecCCCCceEEEEEcC-
Q 019006 125 RAWDVETGK-QIKKMAEHNS----FVNSCC----PSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSD- 194 (347)
Q Consensus 125 ~iwd~~~~~-~~~~~~~~~~----~v~~~~----~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~- 194 (347)
++||+.+++ .+..+..+.. .+..+. +++ +..++++++.|+.|++||++++.......+...+.+++|+|
T Consensus 142 ~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~ 220 (357)
T 3i2n_A 142 KVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQ-EERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRK 220 (357)
T ss_dssp EEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC--CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEESCS
T ss_pred EEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCC-CCCEEEEEccCCeEEEEECccCceeeecCCCCceEEEEcCCC
Confidence 999999876 5666654443 566655 334 45689999999999999999888777777788999999999
Q ss_pred --CCCeEEEEecCCcEEEEeCCCCceEEEe-----cCCCCceeEEEECCCCC-EEEEEcCCCcEEEEeCCCCCCcC----
Q 019006 195 --ASDKIYTGGIDNDVKVWDLRKGEVSMTL-----QGHQDMITGMSLSPDGS-YLLTNGMDCKLCIWDMRPYAPQN---- 262 (347)
Q Consensus 195 --~~~~l~~~~~dg~i~iwd~~~~~~~~~~-----~~~~~~i~~v~~~~~~~-~l~t~~~d~~i~~wd~~~~~~~~---- 262 (347)
++..+++++.||.|++||+++++....+ .+|...|++++|+|+++ ++++++.||.|++||++......
T Consensus 221 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 300 (357)
T 3i2n_A 221 DISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDS 300 (357)
T ss_dssp SSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCT
T ss_pred CCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccC
Confidence 8999999999999999999876544443 38999999999999998 89999999999999997533221
Q ss_pred -----------ceeEEEeccccccccceEEEEECCCCCEEE-EeeCCCeEEEEeCCCcee
Q 019006 263 -----------RCVKILEGHQHNFEKNLLKCGWSPDGSKVT-AGSSDRMVYIWDTTSRRI 310 (347)
Q Consensus 263 -----------~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~-sgs~dg~i~vwd~~~~~~ 310 (347)
..+..+..| ...+.+++|+|++++|+ +|+.||.|++||+.+.++
T Consensus 301 ~g~~~~~~~~~~~~~~~~~~----~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~~ 356 (357)
T 3i2n_A 301 EGIEMGVAGSVSLLQNVTLS----TQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLNK 356 (357)
T ss_dssp TSCCCCCCCEEEEEEEEECC----SSCEEEEEECSSSTTEEEEEETTSEEEEEEECC---
T ss_pred CCCccccccccceeeccccC----CCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCccc
Confidence 234445554 35789999999999998 899999999999987654
No 89
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=4.9e-37 Score=272.37 Aligned_cols=244 Identities=15% Similarity=0.186 Sum_probs=199.7
Q ss_pred EeCcccceeEEEEcCCCCEEEEecCCCeEEEEECCCC--ceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCC
Q 019006 96 LKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETG--KQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMR 173 (347)
Q Consensus 96 ~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~ 173 (347)
+..+..+|.+++|+|++++|++++.|+.|++||+.++ +.+..+..|...+..+++++++ .++++++.|++|++||+.
T Consensus 7 ~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~-~~l~s~s~d~~v~vwd~~ 85 (377)
T 3dwl_C 7 LHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKS-NRIVTCSQDRNAYVYEKR 85 (377)
T ss_dssp EEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTT-CCEEEEETTSSEEEC---
T ss_pred EecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCC-CEEEEEeCCCeEEEEEcC
Confidence 4456779999999999999999999999999999988 6777888899999999998875 578899999999999998
Q ss_pred CCC---ceee-cCCCCceEEEEEcCCCCeEEEEecCCcEEEEeCCCCc---eEEEecC-CCCceeEEEECCCCCEEEEEc
Q 019006 174 QRG---AIQT-FPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGE---VSMTLQG-HQDMITGMSLSPDGSYLLTNG 245 (347)
Q Consensus 174 ~~~---~~~~-~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~---~~~~~~~-~~~~i~~v~~~~~~~~l~t~~ 245 (347)
++. .... ..+...+.+++|+|+++.|++++.|+.|++||++.++ ....+.. |...|.+++|+|++++|++++
T Consensus 86 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~ 165 (377)
T 3dwl_C 86 PDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGC 165 (377)
T ss_dssp ---CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEE
T ss_pred CCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEe
Confidence 776 3333 3566789999999999999999999999999998876 3667777 999999999999999999999
Q ss_pred CCCcEEEEeCCCCCC--------------cCceeEEEeccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCCcee-
Q 019006 246 MDCKLCIWDMRPYAP--------------QNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRI- 310 (347)
Q Consensus 246 ~d~~i~~wd~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~- 310 (347)
.|+.|++||++.... ...+...+ . ....+.+++|+|++++|++|+.||.|++||+.+++.
T Consensus 166 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~ 240 (377)
T 3dwl_C 166 ADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-P----SGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQP 240 (377)
T ss_dssp SSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-C----CSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSC
T ss_pred CCCEEEEEEEEecccCCCccccccccccchhhhhhcc-c----CCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCc
Confidence 999999999853221 12222222 2 346799999999999999999999999999999887
Q ss_pred ---eEEecCCccCeeeEEEcCCCCEEEEecCCCcEEeec
Q 019006 311 ---LYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGE 346 (347)
Q Consensus 311 ---~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~i~~ 346 (347)
+..+.+|...|.+++|+|++++|++++.|+.+ +|+
T Consensus 241 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~ 278 (377)
T 3dwl_C 241 PRALITVKLSQLPLRSLLWANESAIVAAGYNYSPI-LLQ 278 (377)
T ss_dssp EEECCCEECSSSCEEEEEEEETTEEEEEESSSSEE-EEC
T ss_pred ceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEE-EEE
Confidence 78899999999999999999999999877776 553
No 90
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=2.9e-35 Score=265.80 Aligned_cols=247 Identities=20% Similarity=0.369 Sum_probs=211.1
Q ss_pred EEEeCcccceeEEEEcCC-CCEEEEecCCCeEEEEECCC----------CceeeeeeccCcceeEeecCCCCCCEEEEEc
Q 019006 94 MVLKGHKNAILDLHWTTD-GSQIISASPDKTLRAWDVET----------GKQIKKMAEHNSFVNSCCPSRRGPPLVVSGS 162 (347)
Q Consensus 94 ~~~~~h~~~v~~~~~~~~-~~~l~s~~~dg~i~iwd~~~----------~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~ 162 (347)
.....|.+.|.+++|+|+ +.+|++++.||.|++|++.+ .+.+..+..|...+..+++++.+..++++|+
T Consensus 122 ~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~ 201 (430)
T 2xyi_A 122 EIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSAS 201 (430)
T ss_dssp EEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEEC
T ss_pred EEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEe
Confidence 445689999999999997 67899999999999999976 5667778889999999999888776999999
Q ss_pred CCCceEEEeCCCCCc-------eeec-CCCCceEEEEEcC-CCCeEEEEecCCcEEEEeCCCC---ceEEEecCCCCcee
Q 019006 163 DDGTAKLWDMRQRGA-------IQTF-PDKYQITAVSFSD-ASDKIYTGGIDNDVKVWDLRKG---EVSMTLQGHQDMIT 230 (347)
Q Consensus 163 ~d~~i~iwd~~~~~~-------~~~~-~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~---~~~~~~~~~~~~i~ 230 (347)
.||+|++||+..... ...+ .+...|.+++|+| ++..|++++.||.|++||++++ +....+..|...|+
T Consensus 202 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~ 281 (430)
T 2xyi_A 202 DDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVN 281 (430)
T ss_dssp TTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEE
T ss_pred CCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeE
Confidence 999999999987332 1222 4567899999999 5778889999999999999977 56677788999999
Q ss_pred EEEECCCCC-EEEEEcCCCcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCC-EEEEeeCCCeEEEEeCCC-
Q 019006 231 GMSLSPDGS-YLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGS-KVTAGSSDRMVYIWDTTS- 307 (347)
Q Consensus 231 ~v~~~~~~~-~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~-~l~sgs~dg~i~vwd~~~- 307 (347)
+++|+|+++ .+++++.||.|++||++... ..+..+..| ...+.+++|+|+++ +|++++.||.|++||+..
T Consensus 282 ~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~---~~~~~~~~h----~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~ 354 (430)
T 2xyi_A 282 CLSFNPYSEFILATGSADKTVALWDLRNLK---LKLHSFESH----KDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 354 (430)
T ss_dssp EEEECSSCTTEEEEEETTSEEEEEETTCTT---SCSEEEECC----SSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGT
T ss_pred EEEeCCCCCCEEEEEeCCCeEEEEeCCCCC---CCeEEeecC----CCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCC
Confidence 999999987 68899999999999998532 334555555 35799999999995 799999999999999987
Q ss_pred -------------ceeeEEecCCccCeeeEEEcCCCC-EEEEecCCCcEEeecC
Q 019006 308 -------------RRILYKLPGHTGSVNESVFHATEP-VIGSCSSDKQIYLGEI 347 (347)
Q Consensus 308 -------------~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~s~D~~i~i~~~ 347 (347)
.+++..+.+|...|.+++|+|+++ +|++++.|+.|+||++
T Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~ 408 (430)
T 2xyi_A 355 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQM 408 (430)
T ss_dssp TCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEE
T ss_pred ccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEc
Confidence 367788899999999999999999 9999999999999984
No 91
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-36 Score=274.49 Aligned_cols=265 Identities=14% Similarity=0.244 Sum_probs=213.6
Q ss_pred EECCCCCeEEEeeCCCcEEEEeccCCCeeeEEE-eCcccceeEEEEcC-CCCEEEEecCCCeEEEEECCC---Cce---e
Q 019006 64 KFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVL-KGHKNAILDLHWTT-DGSQIISASPDKTLRAWDVET---GKQ---I 135 (347)
Q Consensus 64 ~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~-~~h~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~---~~~---~ 135 (347)
.|+|++..+++++ .|+..+ +....+ .+|.+.|.+++|+| ++++|++|+.||+|++||+.+ +.. .
T Consensus 34 ~f~~~~~~~~~~~------~w~~~g--~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~ 105 (437)
T 3gre_A 34 EFGPIQEIVRSPN------MGNLRG--KLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSS 105 (437)
T ss_dssp GGCCCCCCCCCCC------GGGCCC--CEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCS
T ss_pred hcCCccccccccc------cccccc--eEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCccccee
Confidence 3678888887765 377543 455566 88999999999999 999999999999999999876 331 2
Q ss_pred eeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCC---CCCceeecC-------------CCCceEEEE--EcCCCC
Q 019006 136 KKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMR---QRGAIQTFP-------------DKYQITAVS--FSDASD 197 (347)
Q Consensus 136 ~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~---~~~~~~~~~-------------~~~~v~~~~--~~~~~~ 197 (347)
..+ .|...|.++++.+. ..++++|+.|++|++||+. .+....... ....+.++. +++++.
T Consensus 106 ~~~-~h~~~v~~~~~~~~-~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (437)
T 3gre_A 106 LTY-DCSSTVTQITMIPN-FDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKS 183 (437)
T ss_dssp EEE-ECSSCEEEEEECTT-SSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCE
T ss_pred eec-cCCCCEEEEEEeCC-CCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCC
Confidence 222 47888999999875 4689999999999999984 343332211 344566666 567899
Q ss_pred eEEEEecCCcEEEEeCCCCceEEEecC--CCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEe-ccccc
Q 019006 198 KIYTGGIDNDVKVWDLRKGEVSMTLQG--HQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILE-GHQHN 274 (347)
Q Consensus 198 ~l~~~~~dg~i~iwd~~~~~~~~~~~~--~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~-~~~~~ 274 (347)
.+++++.|+.|++||+++++....+.+ |...|++++|+|++++|++++.||.|++||++. ..++..+. .+
T Consensus 184 ~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~----~~~~~~~~~~~--- 256 (437)
T 3gre_A 184 LLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRF----NVLIRSWSFGD--- 256 (437)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTT----TEEEEEEBCTT---
T ss_pred EEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCC----ccEEEEEecCC---
Confidence 999999999999999999999999988 889999999999999999999999999999984 34445443 32
Q ss_pred cccceEEEEE----CCCCCEEEEeeCCCeEEEEeCCCceeeEEecC--------------------------CccCeeeE
Q 019006 275 FEKNLLKCGW----SPDGSKVTAGSSDRMVYIWDTTSRRILYKLPG--------------------------HTGSVNES 324 (347)
Q Consensus 275 ~~~~~~~~~~----s~~g~~l~sgs~dg~i~vwd~~~~~~~~~~~~--------------------------h~~~v~~~ 324 (347)
...+.+++| +|++.+|++|+.||.|++||+.+++.+..+.+ |...|.++
T Consensus 257 -~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l 335 (437)
T 3gre_A 257 -HAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTI 335 (437)
T ss_dssp -CEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCE
T ss_pred -CCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEE
Confidence 246788855 45788999999999999999999988777664 55568888
Q ss_pred EEcCCCCEEEEecCCCcEEeecC
Q 019006 325 VFHATEPVIGSCSSDKQIYLGEI 347 (347)
Q Consensus 325 ~~~~~~~~l~s~s~D~~i~i~~~ 347 (347)
+|+ ++++|++++.|+.|++||+
T Consensus 336 ~~~-~~~~l~s~~~d~~i~~wd~ 357 (437)
T 3gre_A 336 SVS-NDKILLTDEATSSIVMFSL 357 (437)
T ss_dssp EEE-TTEEEEEEGGGTEEEEEET
T ss_pred EEC-CceEEEecCCCCeEEEEEC
Confidence 898 7789999999999999985
No 92
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=1.2e-35 Score=265.04 Aligned_cols=254 Identities=18% Similarity=0.302 Sum_probs=215.7
Q ss_pred CeeEecCccccEEEEEECCC----C---CeEEEeeCCCcEEEEeccCCCe----eeEEEeCc-----ccceeEEEEc---
Q 019006 49 PIMLLTGHQSAVYTMKFNPA----G---TVIASGSHDRDIFLWHVHGDCK----NFMVLKGH-----KNAILDLHWT--- 109 (347)
Q Consensus 49 ~~~~~~~h~~~V~~v~~~~~----~---~~l~s~~~d~~v~~w~~~~~~~----~~~~~~~h-----~~~v~~~~~~--- 109 (347)
....+.+|...|++++|+|+ + .+|++++.|+.|++|++..... ....+..| ...|.+++|+
T Consensus 54 ~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 133 (397)
T 1sq9_A 54 KSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASN 133 (397)
T ss_dssp GEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC
T ss_pred cceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeecc
Confidence 45678899999999999999 9 9999999999999999864321 15667888 5899999999
Q ss_pred -CCCCE-EEEecCCCeEEEEECCC------Cceee-----ee-------eccCcceeEeecCCCCCCEEEEEcCCCceEE
Q 019006 110 -TDGSQ-IISASPDKTLRAWDVET------GKQIK-----KM-------AEHNSFVNSCCPSRRGPPLVVSGSDDGTAKL 169 (347)
Q Consensus 110 -~~~~~-l~s~~~dg~i~iwd~~~------~~~~~-----~~-------~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~i 169 (347)
|++++ |++++.||.|++||+.+ ++.+. .+ ..|...+..+.+++.+ ++++++.|+.|++
T Consensus 134 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~dg~i~i 211 (397)
T 1sq9_A 134 DRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG--LIATGFNNGTVQI 211 (397)
T ss_dssp ----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS--EEEEECTTSEEEE
T ss_pred CCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc--eEEEEeCCCcEEE
Confidence 99999 99999999999999988 66555 55 3367788888888876 8999999999999
Q ss_pred EeCCCCCceeecCC-------CCceEEEEEcCCCCeEEEEecC---CcEEEEeCCCCceEEEecC-------------CC
Q 019006 170 WDMRQRGAIQTFPD-------KYQITAVSFSDASDKIYTGGID---NDVKVWDLRKGEVSMTLQG-------------HQ 226 (347)
Q Consensus 170 wd~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~~~d---g~i~iwd~~~~~~~~~~~~-------------~~ 226 (347)
||++++..+..+.. ...+.+++|+|++.+|++++.| +.|++||+++++....+.. |.
T Consensus 212 ~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (397)
T 1sq9_A 212 SELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHS 291 (397)
T ss_dssp EETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBS
T ss_pred EECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccC
Confidence 99998888777764 7789999999999999999999 9999999999999999988 99
Q ss_pred CceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEe------ccc-----------cccccceEEEEECCCC-
Q 019006 227 DMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILE------GHQ-----------HNFEKNLLKCGWSPDG- 288 (347)
Q Consensus 227 ~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~------~~~-----------~~~~~~~~~~~~s~~g- 288 (347)
..|.+++|+|++++|++++.|+.|++||++. ..++..+. .|. ......+.+++|+|+|
T Consensus 292 ~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~----~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~ 367 (397)
T 1sq9_A 292 SWVMSLSFNDSGETLCSAGWDGKLRFWDVKT----KERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGW 367 (397)
T ss_dssp SCEEEEEECSSSSEEEEEETTSEEEEEETTT----TEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTT
T ss_pred CcEEEEEECCCCCEEEEEeCCCeEEEEEcCC----CceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccc
Confidence 9999999999999999999999999999974 34455555 330 0014679999999999
Q ss_pred ---------CEEEEeeCCCeEEEEeCCCc
Q 019006 289 ---------SKVTAGSSDRMVYIWDTTSR 308 (347)
Q Consensus 289 ---------~~l~sgs~dg~i~vwd~~~~ 308 (347)
++|++|+.||.|++||+.++
T Consensus 368 ~~~~~~~~~~~l~s~~~dg~i~iw~~~~g 396 (397)
T 1sq9_A 368 RSGMGADLNESLCCVCLDRSIRWFREAGG 396 (397)
T ss_dssp SBSTTCTTSCEEEEEETTTEEEEEEEEC-
T ss_pred cccccccccceEEEecCCCcEEEEEcCCC
Confidence 79999999999999998775
No 93
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=4.3e-36 Score=272.13 Aligned_cols=248 Identities=15% Similarity=0.245 Sum_probs=201.3
Q ss_pred CcccceeEEEEcCCCCEEEEecCCCeEEEEECCCCc-----------eeeeeeccC------------cceeEeecCCCC
Q 019006 98 GHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGK-----------QIKKMAEHN------------SFVNSCCPSRRG 154 (347)
Q Consensus 98 ~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~-----------~~~~~~~~~------------~~v~~~~~~~~~ 154 (347)
.|.+.|.+++|+|++++|++|+.||.|++||+.+++ ....+..|. ..|..+++.+.+
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~ 105 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK 105 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence 467899999999999999999999999999998776 466777887 779999998875
Q ss_pred C-CEEEEEcCCCceEEEeCCCCCce---------------------------------------ee--cCCCCceEEEEE
Q 019006 155 P-PLVVSGSDDGTAKLWDMRQRGAI---------------------------------------QT--FPDKYQITAVSF 192 (347)
Q Consensus 155 ~-~~~~s~~~d~~i~iwd~~~~~~~---------------------------------------~~--~~~~~~v~~~~~ 192 (347)
. .++++++.|++|++||+..+... .. ..+...|.+++|
T Consensus 106 ~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 185 (447)
T 3dw8_B 106 NAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISI 185 (447)
T ss_dssp SSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEE
T ss_pred CcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEE
Confidence 4 58899999999999998653321 01 235678999999
Q ss_pred cCCCCeEEEEecCCcEEEEeCCCCc-eEE-------EecCCCCceeEEEECCCC-CEEEEEcCCCcEEEEeCCCCCCcCc
Q 019006 193 SDASDKIYTGGIDNDVKVWDLRKGE-VSM-------TLQGHQDMITGMSLSPDG-SYLLTNGMDCKLCIWDMRPYAPQNR 263 (347)
Q Consensus 193 ~~~~~~l~~~~~dg~i~iwd~~~~~-~~~-------~~~~~~~~i~~v~~~~~~-~~l~t~~~d~~i~~wd~~~~~~~~~ 263 (347)
+|++..+++| .|+.|++||++... ... .+.+|...|.+++|+|++ ++|++++.|+.|++||++.......
T Consensus 186 ~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 264 (447)
T 3dw8_B 186 NSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDR 264 (447)
T ss_dssp CTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCT
T ss_pred cCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccc
Confidence 9999999998 79999999998443 333 256889999999999998 9999999999999999986543222
Q ss_pred eeEEEeccccc--------cccceEEEEECCCCCEEEEeeCCCeEEEEeCCC-ceeeEEecCCccCe-------------
Q 019006 264 CVKILEGHQHN--------FEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTS-RRILYKLPGHTGSV------------- 321 (347)
Q Consensus 264 ~~~~~~~~~~~--------~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~-~~~~~~~~~h~~~v------------- 321 (347)
....+..+... ....+.+++|+|+|++|++++. +.|++||+.. ++++..+.+|...+
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~ 343 (447)
T 3dw8_B 265 HSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIF 343 (447)
T ss_dssp TCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGG
T ss_pred eeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeeccccccccccccccccccc
Confidence 24555554310 1127999999999999999999 9999999997 88888899986432
Q ss_pred --eeEEEcCCCCEEEEecCCCcEEeecC
Q 019006 322 --NESVFHATEPVIGSCSSDKQIYLGEI 347 (347)
Q Consensus 322 --~~~~~~~~~~~l~s~s~D~~i~i~~~ 347 (347)
..++|+|++++|++++.||.|++||+
T Consensus 344 ~~~~~~~s~~~~~l~s~s~dg~v~iwd~ 371 (447)
T 3dw8_B 344 DKFECCWNGSDSVVMTGSYNNFFRMFDR 371 (447)
T ss_dssp CCCCEEECTTSSEEEEECSTTEEEEEET
T ss_pred cceEEEECCCCCEEEEeccCCEEEEEEc
Confidence 24999999999999999999999985
No 94
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=6.8e-35 Score=278.77 Aligned_cols=250 Identities=26% Similarity=0.422 Sum_probs=205.6
Q ss_pred eeEecCccccEEEEEECCCCCeEEEeeCCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEEC
Q 019006 50 IMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDV 129 (347)
Q Consensus 50 ~~~~~~h~~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~ 129 (347)
...+.+|...|.+++|+|++++|++|+.|++|++||+.. ......+.+|...|.+++|+|++++|++++.|++|++||.
T Consensus 423 ~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~-~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~ 501 (694)
T 3dm0_A 423 QRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAA-GVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNT 501 (694)
T ss_dssp EEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT-TEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECT
T ss_pred cceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCC-CcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEC
Confidence 356889999999999999999999999999999999964 4556778999999999999999999999999999999998
Q ss_pred CCCceeee---eeccCcceeEeecCCCC-CCEEEEEcCCCceEEEeCCCCCceeecC-CCCceEEEEEcCCCCeEEEEec
Q 019006 130 ETGKQIKK---MAEHNSFVNSCCPSRRG-PPLVVSGSDDGTAKLWDMRQRGAIQTFP-DKYQITAVSFSDASDKIYTGGI 204 (347)
Q Consensus 130 ~~~~~~~~---~~~~~~~v~~~~~~~~~-~~~~~s~~~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~ 204 (347)
........ ...|...+.++.+++.. ..++++|+.|++|++||+++......+. |...|.+++|+|++.++++|+.
T Consensus 502 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~ 581 (694)
T 3dm0_A 502 LGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGK 581 (694)
T ss_dssp TSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred CCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeC
Confidence 65433222 13577778888888765 3589999999999999999888777665 5678999999999999999999
Q ss_pred CCcEEEEeCCCCceEEEecCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEecccc-----------
Q 019006 205 DNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQH----------- 273 (347)
Q Consensus 205 dg~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~----------- 273 (347)
||.|++||+++++....+.. ...|.+++|+|++.++++++ ++.|++||++.. ..+..+..+..
T Consensus 582 Dg~i~iwd~~~~~~~~~~~~-~~~v~~~~~sp~~~~l~~~~-~~~i~iwd~~~~----~~~~~~~~~~~~~~~~~~~~~~ 655 (694)
T 3dm0_A 582 DGVVLLWDLAEGKKLYSLEA-NSVIHALCFSPNRYWLCAAT-EHGIKIWDLESK----SIVEDLKVDLKAEAEKADNSGP 655 (694)
T ss_dssp TSBCEEEETTTTEEEECCBC-SSCEEEEEECSSSSEEEEEE-TTEEEEEETTTT----EEEEEECCCCC-----------
T ss_pred CCeEEEEECCCCceEEEecC-CCcEEEEEEcCCCcEEEEEc-CCCEEEEECCCC----CChhhhcccccccccccccccc
Confidence 99999999999988877765 45799999999988877765 567999999743 23333322110
Q ss_pred ----ccccceEEEEECCCCCEEEEeeCCCeEEEEeCC
Q 019006 274 ----NFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTT 306 (347)
Q Consensus 274 ----~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~ 306 (347)
.....+.+++|+|+|++|++|+.||.|++||+.
T Consensus 656 ~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 656 AATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp -----CCCCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred ccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEecc
Confidence 001236789999999999999999999999975
No 95
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.9e-34 Score=252.15 Aligned_cols=249 Identities=18% Similarity=0.304 Sum_probs=218.8
Q ss_pred CeeeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEECCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEE
Q 019006 90 CKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKL 169 (347)
Q Consensus 90 ~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~i 169 (347)
......+.+|...|++++|+|++++|++++.||.|++||+.+++.+..+..|...+..+++++++ .++++++.|+.|++
T Consensus 22 ~~~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~dg~i~i 100 (369)
T 3zwl_B 22 HMKAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFT-KYCVTGSADYSIKL 100 (369)
T ss_dssp SEEEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTS-SEEEEEETTTEEEE
T ss_pred ccccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCC-CEEEEEeCCCeEEE
Confidence 34456789999999999999999999999999999999999999999999999999999998764 68899999999999
Q ss_pred EeCCCCCceeecCCCCceEEEEEcCCCCeEEEEecC-----CcEEEEeCCCCc-----------eEEEecCCCC--ceeE
Q 019006 170 WDMRQRGAIQTFPDKYQITAVSFSDASDKIYTGGID-----NDVKVWDLRKGE-----------VSMTLQGHQD--MITG 231 (347)
Q Consensus 170 wd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~-----------~~~~~~~~~~--~i~~ 231 (347)
||+.+++.+..+.+...+.++.|+|++..+++++.+ +.|++||++... ....+..|.. .+.+
T Consensus 101 wd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (369)
T 3zwl_B 101 WDVSNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATV 180 (369)
T ss_dssp EETTTCCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEE
T ss_pred EECCCCcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeE
Confidence 999999988888888899999999999999999998 999999987543 2334445555 8999
Q ss_pred EEECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCCceee
Q 019006 232 MSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRIL 311 (347)
Q Consensus 232 v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~ 311 (347)
++|+|++++|++++.||.|++||++.. ......+..| ...+.+++|+|++++|++++.||.|++||+.+++.+
T Consensus 181 ~~~~~~~~~l~~~~~dg~i~i~d~~~~---~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~ 253 (369)
T 3zwl_B 181 AGWSTKGKYIIAGHKDGKISKYDVSNN---YEYVDSIDLH----EKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVL 253 (369)
T ss_dssp EEECGGGCEEEEEETTSEEEEEETTTT---TEEEEEEECC----SSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEE
T ss_pred EEEcCCCCEEEEEcCCCEEEEEECCCC---cEeEEEEecC----CCceeEEEECCCCCEEEEecCCceEEEEECCCCcee
Confidence 999999999999999999999999742 3445555554 357899999999999999999999999999999988
Q ss_pred EEecCCccCeeeEEEcCCCCEEEEecCCC--------------cEEeecC
Q 019006 312 YKLPGHTGSVNESVFHATEPVIGSCSSDK--------------QIYLGEI 347 (347)
Q Consensus 312 ~~~~~h~~~v~~~~~~~~~~~l~s~s~D~--------------~i~i~~~ 347 (347)
..+. +...+..++|+|+++++++++.++ .+++||+
T Consensus 254 ~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~ 302 (369)
T 3zwl_B 254 KKYE-TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHK 302 (369)
T ss_dssp EEEE-CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEET
T ss_pred eeec-CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEec
Confidence 8887 778999999999999999999998 7888874
No 96
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.4e-34 Score=261.38 Aligned_cols=281 Identities=15% Similarity=0.117 Sum_probs=222.1
Q ss_pred ccEEEEEECCCCCeEEEeeCCCcEEEEeccCCCe--eeEEEe--------------------------------------
Q 019006 58 SAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCK--NFMVLK-------------------------------------- 97 (347)
Q Consensus 58 ~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~--~~~~~~-------------------------------------- 97 (347)
.++.+++|+|+|++|+++ .++.|++|++..... .+..+.
T Consensus 5 ~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (450)
T 2vdu_B 5 HPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDS 83 (450)
T ss_dssp CCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC-----------------------------------
T ss_pred ccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCcc
Confidence 468899999999976655 578999999854320 122222
Q ss_pred ----------------CcccceeEEEEcCCCCEE-EEecCCCeEEEEECC--CCceeeeee--ccCcceeEeecCCCCCC
Q 019006 98 ----------------GHKNAILDLHWTTDGSQI-ISASPDKTLRAWDVE--TGKQIKKMA--EHNSFVNSCCPSRRGPP 156 (347)
Q Consensus 98 ----------------~h~~~v~~~~~~~~~~~l-~s~~~dg~i~iwd~~--~~~~~~~~~--~~~~~v~~~~~~~~~~~ 156 (347)
+|...|.+++|+|++++| ++++.||.|++||+. +++.+..+. .+...+..+++++++ .
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~-~ 162 (450)
T 2vdu_B 84 IKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDD-T 162 (450)
T ss_dssp ----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTS-S
T ss_pred ccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCC-C
Confidence 344479999999999996 899999999999998 787777765 456778888888865 5
Q ss_pred EEEEEcCCCceEEEeCCCCCcee----ec-CCCCceEEEEEcCC---CCeEEEEecCCcEEEEeCCCCceEEE-ecCCCC
Q 019006 157 LVVSGSDDGTAKLWDMRQRGAIQ----TF-PDKYQITAVSFSDA---SDKIYTGGIDNDVKVWDLRKGEVSMT-LQGHQD 227 (347)
Q Consensus 157 ~~~s~~~d~~i~iwd~~~~~~~~----~~-~~~~~v~~~~~~~~---~~~l~~~~~dg~i~iwd~~~~~~~~~-~~~~~~ 227 (347)
++++|+.++.+++|++....... .+ .+...|.+++|+|+ +.+|++++.|+.|++||+++++.... +.+|..
T Consensus 163 ~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~ 242 (450)
T 2vdu_B 163 TVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKH 242 (450)
T ss_dssp EEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSS
T ss_pred EEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCC
Confidence 78899999999999998766442 33 35578999999999 88999999999999999999887776 568999
Q ss_pred ceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEeccc---------------------cccccceEEEEECC
Q 019006 228 MITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQ---------------------HNFEKNLLKCGWSP 286 (347)
Q Consensus 228 ~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~s~ 286 (347)
.|.+++|+ ++++|++++.|+.|++||++.. .++..+..+. ......+..++|+|
T Consensus 243 ~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~ 317 (450)
T 2vdu_B 243 FVSSICCG-KDYLLLSAGGDDKIFAWDWKTG----KNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSK 317 (450)
T ss_dssp CEEEEEEC-STTEEEEEESSSEEEEEETTTC----CEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECS
T ss_pred ceEEEEEC-CCCEEEEEeCCCeEEEEECCCC----cEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeC
Confidence 99999999 9999999999999999999853 3344443221 01234688999999
Q ss_pred CCCEEEEee-CCCeEEEEeC--CCc---eeeEEecCCccCeeeEEEcCCCCEEEEecC------CCcEEeec
Q 019006 287 DGSKVTAGS-SDRMVYIWDT--TSR---RILYKLPGHTGSVNESVFHATEPVIGSCSS------DKQIYLGE 346 (347)
Q Consensus 287 ~g~~l~sgs-~dg~i~vwd~--~~~---~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~------D~~i~i~~ 346 (347)
++++|++++ .|+.|++|++ ..+ +.+..+.+| +.|.+++|+|++.+++..+. +..|.+|.
T Consensus 318 ~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~ 388 (450)
T 2vdu_B 318 NLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIE 388 (450)
T ss_dssp SSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEE
T ss_pred CCCEEEEEECCCCeEEEEEeccCCCCceeeccEeccC-CceEEEEecCCcEEEEEecccCCCCCCcceEEEE
Confidence 999999999 8999999999 555 677788888 88999999996544444443 44567765
No 97
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-35 Score=284.90 Aligned_cols=254 Identities=27% Similarity=0.461 Sum_probs=210.0
Q ss_pred eEecCccccEEEEEECCCCCeEEEeeCCCcEEEEeccCC-CeeeEEEeCcccceeEEEEcCC--CCEEEEecCCCeEEEE
Q 019006 51 MLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGD-CKNFMVLKGHKNAILDLHWTTD--GSQIISASPDKTLRAW 127 (347)
Q Consensus 51 ~~~~~h~~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~-~~~~~~~~~h~~~v~~~~~~~~--~~~l~s~~~dg~i~iw 127 (347)
.++.||.+.|++++|+|++++|++|+.||.|++|++.+. ......+.+|...|.+++|+++ +++|++|+.||.|++|
T Consensus 3 ~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vw 82 (753)
T 3jro_A 3 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIW 82 (753)
T ss_dssp -----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEE
T ss_pred eecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEE
Confidence 467899999999999999999999999999999998632 3445678899999999999988 9999999999999999
Q ss_pred ECCCCc--eeeeeeccCcceeEeecCCCC-CCEEEEEcCCCceEEEeCCCCCc---eeecCCCCceEEEEEcC-------
Q 019006 128 DVETGK--QIKKMAEHNSFVNSCCPSRRG-PPLVVSGSDDGTAKLWDMRQRGA---IQTFPDKYQITAVSFSD------- 194 (347)
Q Consensus 128 d~~~~~--~~~~~~~~~~~v~~~~~~~~~-~~~~~s~~~d~~i~iwd~~~~~~---~~~~~~~~~v~~~~~~~------- 194 (347)
|+.+++ ....+..|...+.++.+++.. +.++++|+.||+|++||++.+.. .....+...+.++.|+|
T Consensus 83 d~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~ 162 (753)
T 3jro_A 83 KEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDG 162 (753)
T ss_dssp EEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC-----
T ss_pred ECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCccccccc
Confidence 999886 666777889999999998873 56899999999999999987633 22335667899999999
Q ss_pred ------CCCeEEEEecCCcEEEEeCCCC----ceEEEecCCCCceeEEEECCC---CCEEEEEcCCCcEEEEeCCCCCCc
Q 019006 195 ------ASDKIYTGGIDNDVKVWDLRKG----EVSMTLQGHQDMITGMSLSPD---GSYLLTNGMDCKLCIWDMRPYAPQ 261 (347)
Q Consensus 195 ------~~~~l~~~~~dg~i~iwd~~~~----~~~~~~~~~~~~i~~v~~~~~---~~~l~t~~~d~~i~~wd~~~~~~~ 261 (347)
++..+++|+.||.|++||++++ .....+.+|...|++++|+|+ ++++++++.||.|++||++.....
T Consensus 163 ~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~ 242 (753)
T 3jro_A 163 EHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGP 242 (753)
T ss_dssp ----CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSC
T ss_pred ccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCc
Confidence 4889999999999999999876 455678899999999999999 899999999999999999864221
Q ss_pred CceeEEEeccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCC
Q 019006 262 NRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTS 307 (347)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~ 307 (347)
.. .... ........+.+++|+|+|++|++|+.||.|++||+..
T Consensus 243 ~~--~~~~-~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 243 WK--KTLL-KEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (753)
T ss_dssp CB--CCBS-SSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCS
T ss_pred ce--eEEe-ccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCC
Confidence 11 1111 1112345788999999999999999999999999874
No 98
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.3e-35 Score=266.03 Aligned_cols=263 Identities=10% Similarity=0.102 Sum_probs=208.4
Q ss_pred ccccEEEEEECCCCCeEEEeeCCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEECCCCcee
Q 019006 56 HQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQI 135 (347)
Q Consensus 56 h~~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~ 135 (347)
-...|.+++|+|||+++||++.|++|+ +.. .. ..+++|...|.+++|+|+| .++.+.+|+.+.. ..
T Consensus 14 ~~~~v~sv~~SpDG~~iASas~D~TV~--d~~-~~---~~l~gh~~~v~~V~FsPdg-------~~~~~~~~~~~~~-~~ 79 (588)
T 2j04_A 14 FEDWKNNLTWARDGTLYLTTFPDISIG--QPK-YA---KDINCNSKNLFHVKEFPLE-------FENKLDFELAQQN-GL 79 (588)
T ss_dssp CSSSSCCEEECTTSCEEEECSSSEEEE--EEC-CC---SCCSSBGGGTEEEEEECCC-------CCCTTTTSCCCSS-CS
T ss_pred hhccEEEEEECCCCCEEEEEcCCceee--ccc-cc---ceecCCCccEEEEEECCCC-------CcceEEEEeCCCc-eE
Confidence 457899999999999999999999999 532 22 2347999999999999998 5666666654322 22
Q ss_pred eeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeecCCCC-----ceEEEEEcCCCCeEEEEecCCcEEE
Q 019006 136 KKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKY-----QITAVSFSDASDKIYTGGIDNDVKV 210 (347)
Q Consensus 136 ~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l~~~~~dg~i~i 210 (347)
..+ .+...|..++++|++ .++++++.||.+++||... .+..+.+.. .+.+++|+|++++|++|+.||+|++
T Consensus 80 ~~~-~~~~~V~~vawSPdG-~~LAs~s~dg~V~iwd~~~--~l~~l~~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkI 155 (588)
T 2j04_A 80 LNS-QPVCYPRVCKPSPID-DWMAVLSNNGNVSVFKDNK--MLTNLDSKGNLSSRTYHCFEWNPIESSIVVGNEDGELQF 155 (588)
T ss_dssp STT-SCSCCEEEEEECSSS-SCEEEEETTSCEEEEETTE--EEEECCCSSCSTTTCEEEEEECSSSSCEEEEETTSEEEE
T ss_pred eec-CCCCcEEEEEECCCC-CEEEEEeCCCcEEEEeCCc--eeeeccCCCccccccEEEEEEcCCCCEEEEEcCCCEEEE
Confidence 232 347889999999976 4688999999999999543 444444322 4999999999999999999999999
Q ss_pred EeCCCCce-------EEEe----cCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEe-ccccccccc
Q 019006 211 WDLRKGEV-------SMTL----QGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILE-GHQHNFEKN 278 (347)
Q Consensus 211 wd~~~~~~-------~~~~----~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~-~~~~~~~~~ 278 (347)
||+..+.. ..++ .+|.+.|.+++|+|+| +++++.|+.+++||+..... ......+. +| ...
T Consensus 156 Wd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~-~~~~~tL~~~h----~~~ 228 (588)
T 2j04_A 156 FSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSH-QPVSRMIQNAS----RRK 228 (588)
T ss_dssp EECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSS-CCCEEEEECCC----SSC
T ss_pred EECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCcc-ccceeeecccc----cCc
Confidence 99988752 4555 6788899999999999 88889999999999875331 11223343 33 256
Q ss_pred eEEEEECCCCCEEEEeeCCCeEEEEeCCCceeeEEecCCccCeeeEEE--cCCCCEEEEecCCCcEEeecC
Q 019006 279 LLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVF--HATEPVIGSCSSDKQIYLGEI 347 (347)
Q Consensus 279 ~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~--~~~~~~l~s~s~D~~i~i~~~ 347 (347)
|.+++|+ |+.||+++ ++.|++||..+++......+|...|.+++| +|++..++++++||+ ++|.+
T Consensus 229 V~svaFs--g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~ 295 (588)
T 2j04_A 229 ITDLKIV--DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLE 295 (588)
T ss_dssp CCCEEEE--TTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEES
T ss_pred EEEEEEE--CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEee
Confidence 8899999 68999997 699999999988874433389999999999 999999999999999 88853
No 99
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=1.3e-34 Score=261.59 Aligned_cols=254 Identities=24% Similarity=0.464 Sum_probs=212.9
Q ss_pred eEecCccccEEEEEECCC-CCeEEEeeCCCcEEEEeccCC---------CeeeEEEeCcccceeEEEEcCCCC-EEEEec
Q 019006 51 MLLTGHQSAVYTMKFNPA-GTVIASGSHDRDIFLWHVHGD---------CKNFMVLKGHKNAILDLHWTTDGS-QIISAS 119 (347)
Q Consensus 51 ~~~~~h~~~V~~v~~~~~-~~~l~s~~~d~~v~~w~~~~~---------~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~~ 119 (347)
....+|.+.|++++|+|+ +.+||+++.||.|++|++... ......+.+|...|.+++|+|++. +|++++
T Consensus 122 ~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~ 201 (430)
T 2xyi_A 122 EIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSAS 201 (430)
T ss_dssp EEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEEC
T ss_pred EEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEe
Confidence 345689999999999997 689999999999999999641 455677889999999999999988 999999
Q ss_pred CCCeEEEEECCCCce-------eeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCC---Cceeec-CCCCceE
Q 019006 120 PDKTLRAWDVETGKQ-------IKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQR---GAIQTF-PDKYQIT 188 (347)
Q Consensus 120 ~dg~i~iwd~~~~~~-------~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~---~~~~~~-~~~~~v~ 188 (347)
.||.|++|++.++.. ...+..|...+.++++++.+..++++++.|+.|++||++.. ..+..+ .+...++
T Consensus 202 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~ 281 (430)
T 2xyi_A 202 DDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVN 281 (430)
T ss_dssp TTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEE
T ss_pred CCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeE
Confidence 999999999987422 34556788889999999877789999999999999999976 344444 5667899
Q ss_pred EEEEcCCCC-eEEEEecCCcEEEEeCCC-CceEEEecCCCCceeEEEECCCCC-EEEEEcCCCcEEEEeCCCCCCc----
Q 019006 189 AVSFSDASD-KIYTGGIDNDVKVWDLRK-GEVSMTLQGHQDMITGMSLSPDGS-YLLTNGMDCKLCIWDMRPYAPQ---- 261 (347)
Q Consensus 189 ~~~~~~~~~-~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~i~~v~~~~~~~-~l~t~~~d~~i~~wd~~~~~~~---- 261 (347)
+++|+|++. .+++|+.||.|++||++. ......+..|...|.+++|+|+++ +|++++.|+.|++||+......
T Consensus 282 ~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~ 361 (430)
T 2xyi_A 282 CLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTE 361 (430)
T ss_dssp EEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHH
T ss_pred EEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCcc
Confidence 999999987 588999999999999997 556778888999999999999985 6899999999999999753211
Q ss_pred ------CceeEEEeccccccccceEEEEECCCCC-EEEEeeCCCeEEEEeCCCc
Q 019006 262 ------NRCVKILEGHQHNFEKNLLKCGWSPDGS-KVTAGSSDRMVYIWDTTSR 308 (347)
Q Consensus 262 ------~~~~~~~~~~~~~~~~~~~~~~~s~~g~-~l~sgs~dg~i~vwd~~~~ 308 (347)
...+....+| ...+..++|+|+++ +|++++.||.|++|++...
T Consensus 362 ~~~~~~~~~~~~~~~h----~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 362 DAEDGPPELLFIHGGH----TAKISDFSWNPNEPWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp HHHHCCTTEEEECCCC----SSCEEEEEECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred ccccCCcceEEEcCCC----CCCceEEEECCCCCCEEEEEECCCCEEEeEcccc
Confidence 1333344443 35689999999999 8999999999999998754
No 100
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.5e-34 Score=246.31 Aligned_cols=247 Identities=21% Similarity=0.326 Sum_probs=209.9
Q ss_pred eeEecCccccEEEEEECCCCCeEEEeeCCCcEEEEeccCC--CeeeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEE
Q 019006 50 IMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGD--CKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAW 127 (347)
Q Consensus 50 ~~~~~~h~~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~--~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw 127 (347)
...+.+|...|.+++|+|++++|++|+.|+.|++|++... ......+.+|...|.++.| +++++++++.||.|++|
T Consensus 52 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~ 129 (313)
T 3odt_A 52 GTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVW 129 (313)
T ss_dssp EEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEE
T ss_pred EEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEE
Confidence 4567789999999999999999999999999999998643 2345567899999999999 57799999999999999
Q ss_pred ECCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeec--CCCCceEEEEEcCCCCeEEEEecC
Q 019006 128 DVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTF--PDKYQITAVSFSDASDKIYTGGID 205 (347)
Q Consensus 128 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d 205 (347)
| .++....+..|...+..+.+.+....++++++.|+.|++||.. .....+ .+...+.+++|+|++. +++++.|
T Consensus 130 d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~--~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~d 204 (313)
T 3odt_A 130 K--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQND--KVIKTFSGIHNDVVRHLAVVDDGH-FISCSND 204 (313)
T ss_dssp E--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEETT--EEEEEECSSCSSCEEEEEEEETTE-EEEEETT
T ss_pred c--CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEecC--ceEEEEeccCcccEEEEEEcCCCe-EEEccCC
Confidence 9 5677778888888998888877666789999999999999943 333333 3667899999999887 9999999
Q ss_pred CcEEEEeCCCCceEEEecCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEeccccccccceEEEEEC
Q 019006 206 NDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWS 285 (347)
Q Consensus 206 g~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 285 (347)
|.|++||+++++....+.+|...|++++|+|++ .+++++.|+.|++||++.. .....+..+ ...+.+++|+
T Consensus 205 g~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~----~~~~~~~~~----~~~i~~~~~~ 275 (313)
T 3odt_A 205 GLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENG----SLKQVITLP----AISIWSVDCM 275 (313)
T ss_dssp SEEEEEETTTCCEEEEEECCSSCEEEEEECTTS-CEEEEETTSEEEEECTTTC----CEEEEEECS----SSCEEEEEEC
T ss_pred CeEEEEECCchhhhhhhhcCCceEEEEEEecCC-CEEEEecCCEEEEEECCCC----ceeEEEecc----CceEEEEEEc
Confidence 999999999999999999999999999999998 6999999999999998753 445555554 3478999999
Q ss_pred CCCCEEEEeeCCCeEEEEeCCCceeeEE
Q 019006 286 PDGSKVTAGSSDRMVYIWDTTSRRILYK 313 (347)
Q Consensus 286 ~~g~~l~sgs~dg~i~vwd~~~~~~~~~ 313 (347)
|+++ +++++.||.|++||+.+++.+..
T Consensus 276 ~~~~-~~~~~~dg~i~iw~~~~~~~~~~ 302 (313)
T 3odt_A 276 SNGD-IIVGSSDNLVRIFSQEKSRWASE 302 (313)
T ss_dssp TTSC-EEEEETTSCEEEEESCGGGCCC-
T ss_pred cCCC-EEEEeCCCcEEEEeCCCCceeeh
Confidence 9998 56799999999999998876644
No 101
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.7e-35 Score=282.57 Aligned_cols=250 Identities=21% Similarity=0.325 Sum_probs=211.2
Q ss_pred EEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEECC--CCceeeeeeccCcceeEeecCCCC-CCEEEEEcCCCceEEE
Q 019006 94 MVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVE--TGKQIKKMAEHNSFVNSCCPSRRG-PPLVVSGSDDGTAKLW 170 (347)
Q Consensus 94 ~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~--~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~s~~~d~~i~iw 170 (347)
..+.+|.+.|++++|+|++++|++|+.||.|++||+. +++....+..|...|.+++++++. ..++++|+.||+|++|
T Consensus 3 ~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vw 82 (753)
T 3jro_A 3 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIW 82 (753)
T ss_dssp -----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEE
T ss_pred eecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEE
Confidence 3568999999999999999999999999999999997 456677788899999999987652 5689999999999999
Q ss_pred eCCCCC--ceeec-CCCCceEEEEEcCC--CCeEEEEecCCcEEEEeCCCC--ceEEEecCCCCceeEEEECC-------
Q 019006 171 DMRQRG--AIQTF-PDKYQITAVSFSDA--SDKIYTGGIDNDVKVWDLRKG--EVSMTLQGHQDMITGMSLSP------- 236 (347)
Q Consensus 171 d~~~~~--~~~~~-~~~~~v~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~--~~~~~~~~~~~~i~~v~~~~------- 236 (347)
|+.++. .+..+ .+...|.+++|+|+ +..+++|+.||.|++||++.+ .....+.+|...|.+++|+|
T Consensus 83 d~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~ 162 (753)
T 3jro_A 83 KEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDG 162 (753)
T ss_dssp EEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC-----
T ss_pred ECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCccccccc
Confidence 998875 33443 46678999999999 999999999999999999876 34456678999999999999
Q ss_pred ------CCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCC---CCEEEEeeCCCeEEEEeCCC
Q 019006 237 ------DGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPD---GSKVTAGSSDRMVYIWDTTS 307 (347)
Q Consensus 237 ------~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~---g~~l~sgs~dg~i~vwd~~~ 307 (347)
+++++++++.||.|++||++.......+...+.+| ...+.+++|+|+ +.+|++|+.||.|++||+.+
T Consensus 163 ~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h----~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~ 238 (753)
T 3jro_A 163 EHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGH----SDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDN 238 (753)
T ss_dssp ----CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCC----SSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESS
T ss_pred ccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCC----CCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCC
Confidence 58999999999999999998654433455555555 357999999999 99999999999999999988
Q ss_pred ce-----eeEEecCCccCeeeEEEcCCCCEEEEecCCCcEEeecC
Q 019006 308 RR-----ILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGEI 347 (347)
Q Consensus 308 ~~-----~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~i~~~ 347 (347)
+. .+....+|...|.+++|+|+++++++++.||.|++|++
T Consensus 239 ~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~ 283 (753)
T 3jro_A 239 EQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKE 283 (753)
T ss_dssp SSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBC
T ss_pred CCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEec
Confidence 64 34455678999999999999999999999999999985
No 102
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1e-34 Score=254.48 Aligned_cols=267 Identities=10% Similarity=0.075 Sum_probs=204.3
Q ss_pred EECCCCCeEEEeeCCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEECC---------CCce
Q 019006 64 KFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVE---------TGKQ 134 (347)
Q Consensus 64 ~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~---------~~~~ 134 (347)
.+.+++.+|++|+.||+|++||+... +....+. ...|.++.|+|+ +++++.|++|++|+.. +++.
T Consensus 43 ~~~~d~~~l~sg~~Dg~v~iwd~~~~-~~~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~ 116 (343)
T 3lrv_A 43 SMYYDKWVCMCRCEDGALHFTQLKDS-KTITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKV 116 (343)
T ss_dssp SSSEEEEEEEEEEETTEEEEEEESSS-SCEEEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCE
T ss_pred hhcCCCCEEEEECCCCcEEEEECCCC-cEEEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcce
Confidence 34467889999999999999999643 3333333 457788889887 9999999999999765 3343
Q ss_pred eeeee-ccCcceeEeecCC--CCCCEEEEEcCCCceEEEeCCCCCceeec--CCCCceEEEEEcCCCCeEEEEecCCcEE
Q 019006 135 IKKMA-EHNSFVNSCCPSR--RGPPLVVSGSDDGTAKLWDMRQRGAIQTF--PDKYQITAVSFSDASDKIYTGGIDNDVK 209 (347)
Q Consensus 135 ~~~~~-~~~~~v~~~~~~~--~~~~~~~s~~~d~~i~iwd~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~dg~i~ 209 (347)
+..+. .|...+..+.+++ . ..++++++.|++|++||++++...... .+...+.+++|+|++.++++|+.||.|+
T Consensus 117 ~~~~~~~~~~~v~~~~~~~~~~-~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~ 195 (343)
T 3lrv_A 117 LREIEVDSANEIIYMYGHNEVN-TEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILD 195 (343)
T ss_dssp EEEEECCCSSCEEEEECCC----CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEE
T ss_pred eEEeecCCCCCEEEEEcCCCCC-CCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEE
Confidence 33333 4556788888887 4 468899999999999999988876554 2344699999999999999999999999
Q ss_pred EEeCCCCceE-EEecC-CCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCC
Q 019006 210 VWDLRKGEVS-MTLQG-HQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPD 287 (347)
Q Consensus 210 iwd~~~~~~~-~~~~~-~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 287 (347)
+||+++++.. ..+.. |...|++++|+|++.+|++++ |+.|++||++....... +..+..+...... .+++|+|+
T Consensus 196 iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~ 271 (343)
T 3lrv_A 196 VYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLA-YPTYTIPEFKTGT--VTYDIDDS 271 (343)
T ss_dssp EEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBS-SCCCBC-----CC--EEEEECTT
T ss_pred EEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCccee-ecccccccccccc--eEEEECCC
Confidence 9999999877 77887 999999999999999999999 55999999986432211 1111111111111 46899999
Q ss_pred CCEEEEeeC-CCeEEEEeCCCceeeEEecCCccCeeeEEEcC---CCCEEEEecCCCcEEee
Q 019006 288 GSKVTAGSS-DRMVYIWDTTSRRILYKLPGHTGSVNESVFHA---TEPVIGSCSSDKQIYLG 345 (347)
Q Consensus 288 g~~l~sgs~-dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~---~~~~l~s~s~D~~i~i~ 345 (347)
|++|++++. |+.|++|++......... ..+..+.|++ +...+++++.|+.+.++
T Consensus 272 g~~l~~~s~~d~~i~v~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~ 329 (343)
T 3lrv_A 272 GKNMIAYSNESNSLTIYKFDKKTKNWTK----DEESALCLQSDTADFTDMDVVCGDGGIAAI 329 (343)
T ss_dssp SSEEEEEETTTTEEEEEEECTTTCSEEE----EEEEECCC----CCCCEEEEEEETTEEEEE
T ss_pred CCEEEEecCCCCcEEEEEEcccccceEe----cCceeEecCccccccceeEEEecCCceEEE
Confidence 999999998 999999998766544433 4677788888 88889999999888764
No 103
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=2.4e-33 Score=252.54 Aligned_cols=261 Identities=19% Similarity=0.345 Sum_probs=206.2
Q ss_pred ecCccccEEEEEECCCCCeEEEeeCCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEECCCC
Q 019006 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETG 132 (347)
Q Consensus 53 ~~~h~~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~ 132 (347)
+.+|...|++|+|+|+|++||+|+.||+|++|++.. .+....+.+|...+.++.|+ +..|++|+.|+.+++||....
T Consensus 143 ~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~-~~~~~~~~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~ 219 (420)
T 4gga_A 143 MEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQ-QKRLRNMTSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVA 219 (420)
T ss_dssp CCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTT-TEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSS
T ss_pred ecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCC-CcEEEEEeCCCCceEEEeeC--CCEEEEEeCCCceeEeeeccc
Confidence 457888999999999999999999999999999964 46677889999999998885 679999999999999998764
Q ss_pred -ceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCce----e-ecCCCCceEEEEEcCCCCeE-EE--Ee
Q 019006 133 -KQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAI----Q-TFPDKYQITAVSFSDASDKI-YT--GG 203 (347)
Q Consensus 133 -~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~----~-~~~~~~~v~~~~~~~~~~~l-~~--~~ 203 (347)
..+..+..|...+..+.+.+.+ .++++++.|+.+++||...+... . ...+...|.+++|+|.+..+ ++ |+
T Consensus 220 ~~~~~~~~~h~~~~~~~~~~~~g-~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs 298 (420)
T 4gga_A 220 EHHVATLSGHSQEVCGLRWAPDG-RHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGT 298 (420)
T ss_dssp SCEEEEEECCSSCEEEEEECTTS-SEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECT
T ss_pred ceeeEEecccccceeeeeecCCC-CeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeec
Confidence 4456777888888888887765 58899999999999999865432 2 23456789999999976644 43 45
Q ss_pred cCCcEEEEeCCCCceEEEecCCCCceeEEEECCCCCEEEEEc--CCCcEEEEeCCCCCCcCceeEEEeccccccccceEE
Q 019006 204 IDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNG--MDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLK 281 (347)
Q Consensus 204 ~dg~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~--~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (347)
.|+.|++||+++++....+..| ..+.++.|+|+++.+++++ .|+.|++||+.. ..++..+.+|. ..|.+
T Consensus 299 ~D~~I~iwd~~t~~~~~~~~~~-~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~----~~~v~~l~gH~----~~V~~ 369 (420)
T 4gga_A 299 SDRHIRIWNVCSGACLSAVDAH-SQVCSILWSPHYKELISGHGFAQNQLVIWKYPT----MAKVAELKGHT----SRVLS 369 (420)
T ss_dssp TTCEEEEEETTTTEEEEEEECS-SCEEEEEEETTTTEEEEEECTTTCCEEEEETTT----CCEEEEECCCS----SCEEE
T ss_pred CCCEEEEEeCCccccceeeccc-cceeeeeecCCCCeEEEEEecCCCEEEEEECCC----CcEEEEEcCCC----CCEEE
Confidence 8999999999999988888766 4688999999999988765 789999999874 45667777774 57999
Q ss_pred EEECCCCCEEEEeeCCCeEEEEeCCCceeeEEecCCccCeeeEEE
Q 019006 282 CGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVF 326 (347)
Q Consensus 282 ~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~ 326 (347)
++|+|||++|++|+.||+|++||+.......+...+...+....|
T Consensus 370 l~~spdg~~l~S~s~D~tvriWdv~~~~~~~~~~~~~~~~~~~s~ 414 (420)
T 4gga_A 370 LTMSPDGATVASAAADETLRLWRCFELDPARRREREKASAAKSSL 414 (420)
T ss_dssp EEECTTSSCEEEEETTTEEEEECCSCSSCC---------------
T ss_pred EEEcCCCCEEEEEecCCeEEEEECCCCCccchhhhccCCcccccc
Confidence 999999999999999999999999887766666666655544444
No 104
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=3.1e-33 Score=244.03 Aligned_cols=254 Identities=26% Similarity=0.426 Sum_probs=207.1
Q ss_pred CeeEecCccccEEEEEECCCCCeEEEeeCCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEE
Q 019006 49 PIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWD 128 (347)
Q Consensus 49 ~~~~~~~h~~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd 128 (347)
+...+.+|...|.+++|+|++++|++|+.|+.|++|+... .........+...+..+.+++++.+|++++.|+.+++||
T Consensus 78 ~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d 156 (340)
T 4aow_A 78 PQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTT-GTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWN 156 (340)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT-TEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred eeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeecc-cceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEE
Confidence 4567899999999999999999999999999999999864 344556677888899999999999999999999999999
Q ss_pred CCCCcee-eeeeccCcceeEeecCCCC-CCEEEEEcCCCceEEEeCCCCCceeecC-CCCceEEEEEcCCCCeEEEEecC
Q 019006 129 VETGKQI-KKMAEHNSFVNSCCPSRRG-PPLVVSGSDDGTAKLWDMRQRGAIQTFP-DKYQITAVSFSDASDKIYTGGID 205 (347)
Q Consensus 129 ~~~~~~~-~~~~~~~~~v~~~~~~~~~-~~~~~s~~~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d 205 (347)
+...... .....|...+..+.+.+.. ..++++++.|+.|++||++++..+..+. +...|.+++|+|++++|++|+.|
T Consensus 157 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D 236 (340)
T 4aow_A 157 TLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKD 236 (340)
T ss_dssp TTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred eCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCC
Confidence 8765443 3345567777777766543 3578899999999999999888777764 56789999999999999999999
Q ss_pred CcEEEEeCCCCceEEEecCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEecc-----ccccccceE
Q 019006 206 NDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGH-----QHNFEKNLL 280 (347)
Q Consensus 206 g~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~-----~~~~~~~~~ 280 (347)
+.|++||+++.+....+..+ ..|.+++|+|++. +++++.|+.|++||++.. ..+..+... .......|.
T Consensus 237 g~i~iwd~~~~~~~~~~~~~-~~v~~~~~~~~~~-~~~~~~d~~i~iwd~~~~----~~~~~~~~~~~~~~~~~h~~~v~ 310 (340)
T 4aow_A 237 GQAMLWDLNEGKHLYTLDGG-DIINALCFSPNRY-WLCAATGPSIKIWDLEGK----IIVDELKQEVISTSSKAEPPQCT 310 (340)
T ss_dssp CEEEEEETTTTEEEEEEECS-SCEEEEEECSSSS-EEEEEETTEEEEEETTTT----EEEEEECCC-------CCCCCEE
T ss_pred CeEEEEEeccCceeeeecCC-ceEEeeecCCCCc-eeeccCCCEEEEEECCCC----eEEEeccccceeeeccCCCCCEE
Confidence 99999999999888888765 5799999999765 556677999999998742 222222211 112245789
Q ss_pred EEEECCCCCEEEEeeCCCeEEEEeCCCce
Q 019006 281 KCGWSPDGSKVTAGSSDRMVYIWDTTSRR 309 (347)
Q Consensus 281 ~~~~s~~g~~l~sgs~dg~i~vwd~~~~~ 309 (347)
+++|+|+|++|++|+.||.|+|||+.+|.
T Consensus 311 ~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 311 SLAWSADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred EEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 99999999999999999999999998875
No 105
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=1.3e-33 Score=255.00 Aligned_cols=282 Identities=10% Similarity=0.067 Sum_probs=234.3
Q ss_pred ecCccccEEEEEECCCCCeEEEeeCCCcEEEEeccCCCeeeE-----EEeCcccceeEEEEcCCCCEEEEecCCCeEEEE
Q 019006 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFM-----VLKGHKNAILDLHWTTDGSQIISASPDKTLRAW 127 (347)
Q Consensus 53 ~~~h~~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~-----~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw 127 (347)
+..+ ..+.+++|+|++.++++++.|+.|++|++... +... .+.+|...|.+++|++++.++++++.|+.|++|
T Consensus 119 ~~~~-~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~ 196 (433)
T 3bws_A 119 FKTG-FQPKSVRFIDNTRLAIPLLEDEGMDVLDINSG-QTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVF 196 (433)
T ss_dssp EECS-SCBCCCEESSSSEEEEEBTTSSSEEEEETTTC-CEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEE
T ss_pred EcCC-CCceEEEEeCCCeEEEEeCCCCeEEEEECCCC-eEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEE
Confidence 3334 34668999998888899999999999998643 2222 234788899999999999999999999999999
Q ss_pred ECCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeecCCCCceEEEEEcCCCCeEEEEe----
Q 019006 128 DVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIYTGG---- 203 (347)
Q Consensus 128 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---- 203 (347)
|+.+++.+..+..+...+..+++++.+..++++++.|+.|++||++++..+..+.....+.+++|+|+++.+++++
T Consensus 197 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~ 276 (433)
T 3bws_A 197 DLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIGLPRGLLLSKDGKELYIAQFSAS 276 (433)
T ss_dssp ETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCCSEEEEEEECTTSSEEEEEEEESC
T ss_pred ECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCCCCceEEEEcCCCCEEEEEECCCC
Confidence 9999988888888888888899988877666788899999999999888888888777899999999999999887
Q ss_pred ----cCCcEEEEeCCCCceEEEecCCCCceeEEEECCCCCEE-EEEcCCCcEEEEeCCCCCCcCceeEEEeccccccccc
Q 019006 204 ----IDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYL-LTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKN 278 (347)
Q Consensus 204 ----~dg~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l-~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~ 278 (347)
.|+.|++||+++++....+ .|...+.+++|+|+++++ ++++.|+.|++||+.. ......+.. ...
T Consensus 277 ~~~~~dg~i~~~d~~~~~~~~~~-~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~----~~~~~~~~~-----~~~ 346 (433)
T 3bws_A 277 NQESGGGRLGIYSMDKEKLIDTI-GPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKE----KKVQKSIPV-----FDK 346 (433)
T ss_dssp TTCSCCEEEEEEETTTTEEEEEE-EEEECEEEEEECSSTTEEEEEETTTTEEEEEETTT----TEEEEEEEC-----SSS
T ss_pred ccccCCCeEEEEECCCCcEEeec-cCCCCcceEEECCCCCEEEEEecCCCEEEEEECCC----CcEEEEecC-----CCC
Confidence 4889999999988766655 345578999999999755 5668999999999874 233343432 245
Q ss_pred eEEEEECCCCCEEEEeeC---------------CCeEEEEeCCCceeeEEecCCccCeeeEEEcCCCCEEEEecC-CCcE
Q 019006 279 LLKCGWSPDGSKVTAGSS---------------DRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSS-DKQI 342 (347)
Q Consensus 279 ~~~~~~s~~g~~l~sgs~---------------dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~-D~~i 342 (347)
+..++|+|+|++|++++. ||.|++||..+++.+..+.. ...+..++|+|+++.|++++. |+.|
T Consensus 347 ~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~d~~i 425 (433)
T 3bws_A 347 PNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEA-GNQPTGLDVSPDNRYLVISDFLDHQI 425 (433)
T ss_dssp EEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEEC-SSSEEEEEECTTSCEEEEEETTTTEE
T ss_pred CCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecC-CCCCceEEEcCCCCEEEEEECCCCeE
Confidence 789999999999988876 57999999999999888876 457899999999999987775 9999
Q ss_pred EeecC
Q 019006 343 YLGEI 347 (347)
Q Consensus 343 ~i~~~ 347 (347)
++|++
T Consensus 426 ~v~~~ 430 (433)
T 3bws_A 426 RVYRR 430 (433)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 99985
No 106
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.7e-33 Score=251.91 Aligned_cols=249 Identities=20% Similarity=0.339 Sum_probs=205.0
Q ss_pred CccccEEEEEECCCCCeEEEeeCCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEECC-CCc
Q 019006 55 GHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVE-TGK 133 (347)
Q Consensus 55 ~h~~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~ 133 (347)
.|...|.+++|+|++++|++|+.||.|++|++.. ......+.+|...|.+++|+ +++|++++.||.|++||+. ...
T Consensus 132 ~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~ 208 (401)
T 4aez_A 132 DESTYVASVKWSHDGSFLSVGLGNGLVDIYDVES-QTKLRTMAGHQARVGCLSWN--RHVLSSGSRSGAIHHHDVRIANH 208 (401)
T ss_dssp CTTCCEEEEEECTTSSEEEEEETTSCEEEEETTT-CCEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSC
T ss_pred CCCCCEEEEEECCCCCEEEEECCCCeEEEEECcC-CeEEEEecCCCCceEEEEEC--CCEEEEEcCCCCEEEEecccCcc
Confidence 3889999999999999999999999999999964 35566788999999999994 5799999999999999998 456
Q ss_pred eeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeecC-CCCceEEEEEcCCCCeE-EEEe--cCCcEE
Q 019006 134 QIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFP-DKYQITAVSFSDASDKI-YTGG--IDNDVK 209 (347)
Q Consensus 134 ~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l-~~~~--~dg~i~ 209 (347)
....+..|...+..+.++++ ..++++|+.|+.|++||++++.....+. +...+.+++|+|++..+ ++++ .|+.|+
T Consensus 209 ~~~~~~~~~~~v~~~~~~~~-~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~ 287 (401)
T 4aez_A 209 QIGTLQGHSSEVCGLAWRSD-GLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIH 287 (401)
T ss_dssp EEEEEECCSSCEEEEEECTT-SSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEE
T ss_pred eeeEEcCCCCCeeEEEEcCC-CCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEE
Confidence 67778889999999999885 4689999999999999999888776664 56789999999987654 5544 799999
Q ss_pred EEeCCCCceEEEecCCCCceeEEEECCCCCEEEE--EcCCCcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCC
Q 019006 210 VWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLT--NGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPD 287 (347)
Q Consensus 210 iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~t--~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 287 (347)
+||+++++....+. +...|.+++|+|+++++++ |+.||.|++||+.... ......+.+| ...+.+++|+|+
T Consensus 288 i~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~--~~~~~~~~~h----~~~v~~~~~s~d 360 (401)
T 4aez_A 288 FWNAATGARVNTVD-AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSG--LTKQVDIPAH----DTRVLYSALSPD 360 (401)
T ss_dssp EEETTTCCEEEEEE-CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTE--EEEEEEEECC----SSCCCEEEECTT
T ss_pred EEECCCCCEEEEEe-CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCcc--ceeEEEecCC----CCCEEEEEECCC
Confidence 99999998888876 5567999999999999999 4489999999987421 1222234444 356889999999
Q ss_pred CCEEEEeeCCCeEEEEeCCCceeeEEe
Q 019006 288 GSKVTAGSSDRMVYIWDTTSRRILYKL 314 (347)
Q Consensus 288 g~~l~sgs~dg~i~vwd~~~~~~~~~~ 314 (347)
|++|++|+.||.|++|++.+++.+.+.
T Consensus 361 g~~l~s~~~dg~i~iw~~~~~~~~~~~ 387 (401)
T 4aez_A 361 GRILSTAASDENLKFWRVYDGDHVKRP 387 (401)
T ss_dssp SSEEEEECTTSEEEEEECCC-------
T ss_pred CCEEEEEeCCCcEEEEECCCCcccccc
Confidence 999999999999999999998877654
No 107
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=1.9e-34 Score=260.82 Aligned_cols=248 Identities=16% Similarity=0.189 Sum_probs=198.4
Q ss_pred EEEeCcccceeEEEEcC-CCCEEEEecCCCeEEEEECCCCce--eeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEE
Q 019006 94 MVLKGHKNAILDLHWTT-DGSQIISASPDKTLRAWDVETGKQ--IKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLW 170 (347)
Q Consensus 94 ~~~~~h~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iw 170 (347)
....+|...|++|+|+| ++++||+|+.||.|+|||+.+++. ...+..|...|.++++++.+..+|++|+.|++|++|
T Consensus 113 ~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iw 192 (435)
T 4e54_B 113 QKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQ 192 (435)
T ss_dssp CEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEE
T ss_pred ccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEe
Confidence 34567889999999999 567899999999999999987654 344567899999999998777899999999999999
Q ss_pred eCCCCCceeecC---CCCceEEEEEcCCCCeEEEEecCCcEEEEeCCCCceEEEecCCCCceeEEEECCCCC-EEEEEcC
Q 019006 171 DMRQRGAIQTFP---DKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGS-YLLTNGM 246 (347)
Q Consensus 171 d~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~-~l~t~~~ 246 (347)
|++++....... ....+.+++|+|++.++++|+.||.|++||++ ++....+.+|...|++++|+|+++ ++++++.
T Consensus 193 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~-~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~ 271 (435)
T 4e54_B 193 DFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMD-GKELWNLRMHKKKVTHVALNPCCDWFLATASV 271 (435)
T ss_dssp ETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESS-SCBCCCSBCCSSCEEEEEECTTCSSEEEEEET
T ss_pred eccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccC-cceeEEEecccceEEeeeecCCCceEEEEecC
Confidence 998654333222 23357889999999999999999999999986 456677889999999999999876 6789999
Q ss_pred CCcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCCceeeEEecCCcc------C
Q 019006 247 DCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTG------S 320 (347)
Q Consensus 247 d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~------~ 320 (347)
|+.|++||++........ ....+| ...|.+++|+|+|.+|++|+.||.|++||+.+++....+.+|.. .
T Consensus 272 d~~v~iwd~~~~~~~~~~-~~~~~h----~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 346 (435)
T 4e54_B 272 DQTVKIWDLRQVRGKASF-LYSLPH----RHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLT 346 (435)
T ss_dssp TSBCCEEETTTCCSSSCC-SBCCBC----SSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSC
T ss_pred cceeeEEecccccccceE-EEeeec----cccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccccccccce
Confidence 999999999865432221 111222 45789999999999999999999999999999988877776653 2
Q ss_pred eeeEEEcCCCCEEEEec------------CCCcEEeecC
Q 019006 321 VNESVFHATEPVIGSCS------------SDKQIYLGEI 347 (347)
Q Consensus 321 v~~~~~~~~~~~l~s~s------------~D~~i~i~~~ 347 (347)
+....|+|++..+++++ .++.|++||+
T Consensus 347 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~ 385 (435)
T 4e54_B 347 PIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDG 385 (435)
T ss_dssp CCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECS
T ss_pred eEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEEC
Confidence 44567788777666654 3357889874
No 108
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=3.5e-34 Score=250.35 Aligned_cols=241 Identities=14% Similarity=0.105 Sum_probs=204.7
Q ss_pred EeCcccceeEEEEcCCCCEEEEecCCCeEEEEECCCCc---eeeeeeccCcceeEeecCCCCCC-EEEEEcCCCceEEEe
Q 019006 96 LKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGK---QIKKMAEHNSFVNSCCPSRRGPP-LVVSGSDDGTAKLWD 171 (347)
Q Consensus 96 ~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~---~~~~~~~~~~~v~~~~~~~~~~~-~~~s~~~d~~i~iwd 171 (347)
..+|.+.|.+++|+|++++|++++.||.|++|++.+++ ....+..|...+..+++.+.+ . ++++|+.|+.|++||
T Consensus 7 ~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~l~~~~~dg~i~~wd 85 (342)
T 1yfq_A 7 EQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNT-DLQIYVGTVQGEILKVD 85 (342)
T ss_dssp SSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESS-SEEEEEEETTSCEEEEC
T ss_pred ccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCC-CcEEEEEcCCCeEEEEE
Confidence 45899999999999999999999999999999998776 345556788889999888764 6 789999999999999
Q ss_pred C-CCCCceeecC--CCCceEEEEEcCCCCeEEEEecCCcEEEEeCCC---------CceEEEecCCCCceeEEEECCCCC
Q 019006 172 M-RQRGAIQTFP--DKYQITAVSFSDASDKIYTGGIDNDVKVWDLRK---------GEVSMTLQGHQDMITGMSLSPDGS 239 (347)
Q Consensus 172 ~-~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~---------~~~~~~~~~~~~~i~~v~~~~~~~ 239 (347)
+ ..+....... +...|.+++|+| +..+++++.|+.|++||+++ ++....+. |...|.+++|+|++
T Consensus 86 ~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~- 162 (342)
T 1yfq_A 86 LIGSPSFQALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSSR- 162 (342)
T ss_dssp SSSSSSEEECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECSSE-
T ss_pred eccCCceEeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEEecCCc-
Confidence 9 8776644445 778899999999 99999999999999999987 66555555 78899999999887
Q ss_pred EEEEEcCCCcEEEEeCCC-CCCcCceeEEEeccccccccceEEEEECC-CCCEEEEeeCCCeEEEEeCCCc------eee
Q 019006 240 YLLTNGMDCKLCIWDMRP-YAPQNRCVKILEGHQHNFEKNLLKCGWSP-DGSKVTAGSSDRMVYIWDTTSR------RIL 311 (347)
Q Consensus 240 ~l~t~~~d~~i~~wd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-~g~~l~sgs~dg~i~vwd~~~~------~~~ 311 (347)
+++++.|+.|++||++. .... ....... ....+.+++|+| ++++|++|+.||.|++|++... +.+
T Consensus 163 -l~~~~~d~~i~i~d~~~~~~~~--~~~~~~~----~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~ 235 (342)
T 1yfq_A 163 -LIVGMNNSQVQWFRLPLCEDDN--GTIEESG----LKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKR 235 (342)
T ss_dssp -EEEEESTTEEEEEESSCCTTCC--CEEEECS----CSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTC
T ss_pred -EEEEeCCCeEEEEECCcccccc--ceeeecC----CCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccc
Confidence 99999999999999985 3221 1111222 235689999999 9999999999999999999887 777
Q ss_pred EEecCCcc---------CeeeEEEcCCCCEEEEecCCCcEEeecC
Q 019006 312 YKLPGHTG---------SVNESVFHATEPVIGSCSSDKQIYLGEI 347 (347)
Q Consensus 312 ~~~~~h~~---------~v~~~~~~~~~~~l~s~s~D~~i~i~~~ 347 (347)
..+.+|.. .|.+++|+|++++|++++.||.|++||+
T Consensus 236 ~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~ 280 (342)
T 1yfq_A 236 FAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNL 280 (342)
T ss_dssp EEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEET
T ss_pred eeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcC
Confidence 88888865 9999999999999999999999999985
No 109
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=2.3e-32 Score=243.52 Aligned_cols=264 Identities=15% Similarity=0.149 Sum_probs=220.6
Q ss_pred CeEEEeeCCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEE-EEecCCCeEEEEECCCCceeeeeeccCcceeEe
Q 019006 70 TVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQI-ISASPDKTLRAWDVETGKQIKKMAEHNSFVNSC 148 (347)
Q Consensus 70 ~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~ 148 (347)
.++++++.|+.|++|++.. .+....+..|. .+.+++|+|++++| ++++.|+.|++||+.+++.+..+..+. .+..+
T Consensus 3 ~l~vs~~~d~~v~v~d~~~-~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~ 79 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTS-NKVTATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGV 79 (391)
T ss_dssp EEEEEETTTTEEEEEETTT-TEEEEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEE
T ss_pred EEEEEcCCCCEEEEEECCC-CeEEEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-Cccce
Confidence 4688999999999999964 34555666664 58999999999987 677799999999999998887776555 77888
Q ss_pred ecCCCCCCEEEEEcCCCceEEEeCCCCCceeecCCCCceEEEEEcCCCCeE-EEEecCCcEEEEeCCCCceEEEecCCCC
Q 019006 149 CPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKI-YTGGIDNDVKVWDLRKGEVSMTLQGHQD 227 (347)
Q Consensus 149 ~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~~ 227 (347)
++++++..++++++.++.|++||+.+++.+..+.....+.+++|+|+++.+ ++++.++.|++||+++++....+..+.
T Consensus 80 ~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~- 158 (391)
T 1l0q_A 80 AVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGR- 158 (391)
T ss_dssp EECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCS-
T ss_pred EECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCC-
Confidence 888887767778888899999999998888877777789999999999977 678889999999999998888877664
Q ss_pred ceeEEEECCCCCEE-EEEcCCCcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEEEEee---CCCeEEEE
Q 019006 228 MITGMSLSPDGSYL-LTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGS---SDRMVYIW 303 (347)
Q Consensus 228 ~i~~v~~~~~~~~l-~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs---~dg~i~vw 303 (347)
.+.+++|+|+++++ ++++.++.|++||++.. .....+.. ...+..++|+|+|++|++++ .++.|++|
T Consensus 159 ~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~----~~~~~~~~-----~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~ 229 (391)
T 1l0q_A 159 SPKGIAVTPDGTKVYVANFDSMSISVIDTVTN----SVIDTVKV-----EAAPSGIAVNPEGTKAYVTNVDKYFNTVSMI 229 (391)
T ss_dssp SEEEEEECTTSSEEEEEETTTTEEEEEETTTT----EEEEEEEC-----SSEEEEEEECTTSSEEEEEEECSSCCEEEEE
T ss_pred CcceEEECCCCCEEEEEeCCCCEEEEEECCCC----eEEEEEec-----CCCccceEECCCCCEEEEEecCcCCCcEEEE
Confidence 46999999999988 57788999999998743 33333332 23578899999999999888 68999999
Q ss_pred eCCCceeeEEecCCccCeeeEEEcCCCCEE-EEecCCCcEEeecC
Q 019006 304 DTTSRRILYKLPGHTGSVNESVFHATEPVI-GSCSSDKQIYLGEI 347 (347)
Q Consensus 304 d~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~s~s~D~~i~i~~~ 347 (347)
|+.+++.+..+..|. .+..++|+|+++.| ++++.|+.|++||+
T Consensus 230 d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~s~~~d~~v~v~d~ 273 (391)
T 1l0q_A 230 DTGTNKITARIPVGP-DPAGIAVTPDGKKVYVALSFXNTVSVIDT 273 (391)
T ss_dssp ETTTTEEEEEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEET
T ss_pred ECCCCeEEEEEecCC-CccEEEEccCCCEEEEEcCCCCEEEEEEC
Confidence 999999998888765 57899999999877 68889999999985
No 110
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=6.2e-35 Score=260.56 Aligned_cols=255 Identities=14% Similarity=0.071 Sum_probs=180.5
Q ss_pred ccccEEEEEECCCCCeEEEeeCCCcEEEEeccCCCee----eEEEeCcccceeEEEEcC--------CCCEEEEecCCCe
Q 019006 56 HQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKN----FMVLKGHKNAILDLHWTT--------DGSQIISASPDKT 123 (347)
Q Consensus 56 h~~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~----~~~~~~h~~~v~~~~~~~--------~~~~l~s~~~dg~ 123 (347)
|...+....+.+++.+||+|+.|++|++|+....... +..+.+|.+.|.+++|+| ++++|++++.|++
T Consensus 88 ~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~t 167 (393)
T 4gq1_A 88 HDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCT 167 (393)
T ss_dssp ---------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSE
T ss_pred cCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCe
Confidence 4444444445556778999999999999998654221 123578999999999997 7889999999999
Q ss_pred EEEEECCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeec----------------------
Q 019006 124 LRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTF---------------------- 181 (347)
Q Consensus 124 i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~---------------------- 181 (347)
|+|||+.++..+..+..|...+.+++++|.+..++++|+.|++|++||+++++.....
T Consensus 168 v~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 247 (393)
T 4gq1_A 168 LIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNT 247 (393)
T ss_dssp EEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC--
T ss_pred EEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceee
Confidence 9999998888888888888999999999887778999999999999999876532211
Q ss_pred ----CCCCceEEEEEc-CCCCeEEEEecCCcEEEEeCCCCceEEEecCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCC
Q 019006 182 ----PDKYQITAVSFS-DASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMR 256 (347)
Q Consensus 182 ----~~~~~v~~~~~~-~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~ 256 (347)
.+...+.++.|. +++..+++++.|+.+++||+..++....+..|...+..+.+.|+.+.+.....
T Consensus 248 ~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~---------- 317 (393)
T 4gq1_A 248 CHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPS---------- 317 (393)
T ss_dssp ----CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCC----------
T ss_pred eecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCc----------
Confidence 123456778876 78999999999999999999988877777777777777777765432211110
Q ss_pred CCCCcCceeEEEeccccccccceEEEEECC--CCCEEEEeeCCCeEEEEeCCCceeeEEecCCccCeeeEEEcCCCCEEE
Q 019006 257 PYAPQNRCVKILEGHQHNFEKNLLKCGWSP--DGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIG 334 (347)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~--~g~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 334 (347)
...+.|+| ++.++++|+.||.|++||..+++.+..+.+|...|.+++|+|++++||
T Consensus 318 ----------------------~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA 375 (393)
T 4gq1_A 318 ----------------------LLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLA 375 (393)
T ss_dssp ----------------------SSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEE
T ss_pred ----------------------ceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEE
Confidence 11112333 455778899999999999999998888889999999999999999999
Q ss_pred EecCCCcE
Q 019006 335 SCSSDKQI 342 (347)
Q Consensus 335 s~s~D~~i 342 (347)
+++.||.+
T Consensus 376 ~as~~Gv~ 383 (393)
T 4gq1_A 376 IATEGSVL 383 (393)
T ss_dssp EEESSEEE
T ss_pred EEeCCCeE
Confidence 99988763
No 111
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.9e-34 Score=260.20 Aligned_cols=245 Identities=12% Similarity=0.103 Sum_probs=203.1
Q ss_pred CccccEEEEEECCCCCeEEEeeCCCcEEEEeccCCCeeeEEEeCccc-----ceeEEEEcCCCCEEEEecCCCeEEEEEC
Q 019006 55 GHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKN-----AILDLHWTTDGSQIISASPDKTLRAWDV 129 (347)
Q Consensus 55 ~h~~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~-----~v~~~~~~~~~~~l~s~~~dg~i~iwd~ 129 (347)
+|...|.+++|+|+|..||+++.||+|++|+..+ .+..+. |.. .|.+++|||||++|++|+.||+|++||+
T Consensus 83 ~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~---~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~ 158 (588)
T 2j04_A 83 QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK---MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSI 158 (588)
T ss_dssp SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE---EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEEC
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc---eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEEC
Confidence 6788999999999999999999999999999643 344455 655 5999999999999999999999999999
Q ss_pred CCCce-------eeee----eccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCce---eec--CCCCceEEEEEc
Q 019006 130 ETGKQ-------IKKM----AEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAI---QTF--PDKYQITAVSFS 193 (347)
Q Consensus 130 ~~~~~-------~~~~----~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~---~~~--~~~~~v~~~~~~ 193 (347)
.++.. +..+ .+|...|..+++++++ +++++.|+++++||+..+... +.+ .+...|.+++|+
T Consensus 159 ~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg---Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs 235 (588)
T 2j04_A 159 RKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV---LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV 235 (588)
T ss_dssp CCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE---EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE
T ss_pred CCCccccccceeeeeeecccccccccEEEEEEcCCc---EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE
Confidence 98752 4555 4566799999999876 778889999999999877632 344 345789999999
Q ss_pred CCCCeEEEEecCCcEEEEeCCCCceEEEecCCCCceeEEEE--CCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEecc
Q 019006 194 DASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSL--SPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGH 271 (347)
Q Consensus 194 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~v~~--~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~ 271 (347)
++.+++++ +++|++||+..++......+|...+.+++| +|++..+++++.||+ ++|...
T Consensus 236 --g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d--------------- 296 (588)
T 2j04_A 236 --DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLED--------------- 296 (588)
T ss_dssp --TTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESS---------------
T ss_pred --CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeec---------------
Confidence 58888887 699999999988764444489999999999 999999999999999 999864
Q ss_pred ccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCCceeeEEecCCccCeeeEEEcCCCCEEEEecC
Q 019006 272 QHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSS 338 (347)
Q Consensus 272 ~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~ 338 (347)
.++++||+..+++. |+++++|+...+. +..+.+ ...|.+++|+|+|+.+|+++.
T Consensus 297 ---------~~~~spd~~l~a~~--d~~v~lW~~~g~~-l~~~~~-~~~I~~va~SPdG~~lA~~~~ 350 (588)
T 2j04_A 297 ---------ELHVTADNIIAPYL--EKKFKKWSTIWNE-FNNYET-TLVIHGISLSPDGYSIAIVYD 350 (588)
T ss_dssp ---------SEEEECCCSSHHHH--HHHHHHTTTTTTS-SSSSCC-EEEEEEEEECTTSSEEEEEEE
T ss_pred ---------cEEECCCceEEEEc--CCEEEEEECCCCc-eeeecc-ceEEEEEEECCCCCEEEEEEe
Confidence 13378999888875 9999999976554 445555 667999999999999999874
No 112
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=3.2e-32 Score=243.28 Aligned_cols=281 Identities=16% Similarity=0.261 Sum_probs=197.6
Q ss_pred cCccccEEEEEECC-CCCeEEEeeCCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCC---CCEEEEecCCCeEEEEEC
Q 019006 54 TGHQSAVYTMKFNP-AGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTD---GSQIISASPDKTLRAWDV 129 (347)
Q Consensus 54 ~~h~~~V~~v~~~~-~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~---~~~l~s~~~dg~i~iwd~ 129 (347)
.+|...|.+++|+| ++.+|++++.||.|++|++... .....+ .+...+.++.|++. +.++++++.||.|++||+
T Consensus 96 ~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~ 173 (408)
T 4a11_B 96 DVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTL-QTADVF-NFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDL 173 (408)
T ss_dssp TCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTT-EEEEEE-ECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEES
T ss_pred ccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCC-ccceec-cCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeC
Confidence 36999999999999 7789999999999999999643 333333 36778999999984 459999999999999999
Q ss_pred CCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCC-ceeec----------------CCCCceEEEEE
Q 019006 130 ETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRG-AIQTF----------------PDKYQITAVSF 192 (347)
Q Consensus 130 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~-~~~~~----------------~~~~~v~~~~~ 192 (347)
.+++.+..+..|...+..+++.+.+..++++++.||.|++||++... .+..+ .+...+.+++|
T Consensus 174 ~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 253 (408)
T 4a11_B 174 KSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCF 253 (408)
T ss_dssp SSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEE
T ss_pred CCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEE
Confidence 99998888988999999999999887789999999999999998654 22222 34567999999
Q ss_pred cCCCCeEEEEecCCcEEEEeCCCCceEEEecCCC-----CceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEE
Q 019006 193 SDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQ-----DMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKI 267 (347)
Q Consensus 193 ~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-----~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~ 267 (347)
+|+++++++++.||.|++||+++++....+..+. ..+........+..+++++.|+.|++||+.. ...+..
T Consensus 254 ~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~----~~~~~~ 329 (408)
T 4a11_B 254 TSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYS----GEQITM 329 (408)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTT----CCEEEE
T ss_pred cCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcC----Ccceee
Confidence 9999999999999999999999887654443221 1122222233456677778899999999974 345566
Q ss_pred EeccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCCceeeEEecCCccCeeeEEEcCC-CCEEEEecCCCcEEeec
Q 019006 268 LEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHAT-EPVIGSCSSDKQIYLGE 346 (347)
Q Consensus 268 ~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~-~~~l~s~s~D~~i~i~~ 346 (347)
+.+|. ..+.+++|+|++++|++|+.||.|++||+.+++.+.....+.. ...+.+. .....+++.|+.+.+|+
T Consensus 330 ~~~~~----~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~W~ 402 (408)
T 4a11_B 330 LKGHY----KTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPVPDDDETTT---KSQLNPAFEDAWSSSDEEGGTSAWS 402 (408)
T ss_dssp ECCCS----SCEEEEEEETTTTEEEEEETTSCEEEEEECC----------------------------------------
T ss_pred eccCC----CeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCccCCCCceEe---ccccccccceeecccCccCceeecC
Confidence 66553 5789999999999999999999999999999887765544332 2234443 34556777899999996
Q ss_pred C
Q 019006 347 I 347 (347)
Q Consensus 347 ~ 347 (347)
.
T Consensus 403 ~ 403 (408)
T 4a11_B 403 H 403 (408)
T ss_dssp -
T ss_pred C
Confidence 3
No 113
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=4.2e-33 Score=246.19 Aligned_cols=243 Identities=12% Similarity=0.142 Sum_probs=188.0
Q ss_pred EecCccccEEEEEECCCCCeEEE-----------eeCCCcEEEEeccCCCeeeEE--------EeCcccceeEEEEcCCC
Q 019006 52 LLTGHQSAVYTMKFNPAGTVIAS-----------GSHDRDIFLWHVHGDCKNFMV--------LKGHKNAILDLHWTTDG 112 (347)
Q Consensus 52 ~~~~h~~~V~~v~~~~~~~~l~s-----------~~~d~~v~~w~~~~~~~~~~~--------~~~h~~~v~~~~~~~~~ 112 (347)
.|.+|...|.+++++ +..+++ ++.|+.+++|++......... ...+...+..++|+|||
T Consensus 68 ~l~~~~~~v~s~~~~--~~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg 145 (365)
T 4h5i_A 68 ALEDNDDSPTAIDAS--KGIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREG 145 (365)
T ss_dssp ECCTTSCCCCEEEEE--TTEEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTS
T ss_pred EccCCCCceEEEEeC--CCEEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCC
Confidence 567888889888764 445554 456788999998643322211 12344568899999999
Q ss_pred CEEEE--ecCCCeEEEEECCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeec---CCCCce
Q 019006 113 SQIIS--ASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTF---PDKYQI 187 (347)
Q Consensus 113 ~~l~s--~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~---~~~~~v 187 (347)
+++++ ++.|++|+|||+.+++.+..+. |...|.++++++++ .++++++.+ .+++|+..++...... .+...+
T Consensus 146 ~~la~as~~~d~~i~iwd~~~~~~~~~~~-~~~~V~~v~fspdg-~~l~s~s~~-~~~~~~~~~~~~~~~~~~~~~~~~v 222 (365)
T 4h5i_A 146 TVAAIASSKVPAIMRIIDPSDLTEKFEIE-TRGEVKDLHFSTDG-KVVAYITGS-SLEVISTVTGSCIARKTDFDKNWSL 222 (365)
T ss_dssp SCEEEEESCSSCEEEEEETTTTEEEEEEE-CSSCCCEEEECTTS-SEEEEECSS-CEEEEETTTCCEEEEECCCCTTEEE
T ss_pred CEEEEEECCCCCEEEEeECCCCcEEEEeC-CCCceEEEEEccCC-ceEEeccce-eEEEEEeccCcceeeeecCCCCCCE
Confidence 99765 4578999999999998887775 66779999998876 577777754 5666766666554322 345679
Q ss_pred EEEEEcCCCCeEEEEecCC----cEEEEeCCCCce----EEEecCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCC
Q 019006 188 TAVSFSDASDKIYTGGIDN----DVKVWDLRKGEV----SMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYA 259 (347)
Q Consensus 188 ~~~~~~~~~~~l~~~~~dg----~i~iwd~~~~~~----~~~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~ 259 (347)
.+++|+|++..+++++.|+ .+++||+..... ...+.+|...|++++|+|+|++||+|+.|++|+|||++.
T Consensus 223 ~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~-- 300 (365)
T 4h5i_A 223 SKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKD-- 300 (365)
T ss_dssp EEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTT--
T ss_pred EEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCC--
Confidence 9999999999999999887 588898876543 345678899999999999999999999999999999874
Q ss_pred CcCceeEEE-eccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCC
Q 019006 260 PQNRCVKIL-EGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTS 307 (347)
Q Consensus 260 ~~~~~~~~~-~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~ 307 (347)
.+++..+ .+| ...|.+++|+|||++||+||.|++|+|||+..
T Consensus 301 --~~~~~~~~~gH----~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 301 --LSMSKIFKQAH----SFAITEVTISPDSTYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp --TEEEEEETTSS----SSCEEEEEECTTSCEEEEEETTSEEEEEECCT
T ss_pred --CcEEEEecCcc----cCCEEEEEECCCCCEEEEEeCCCeEEEEEcCC
Confidence 3444443 455 36799999999999999999999999999854
No 114
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=3.1e-33 Score=250.32 Aligned_cols=254 Identities=19% Similarity=0.325 Sum_probs=208.8
Q ss_pred CeeEecCccccEEEEEECC-CCCeEEEeeCCCcEEEEeccCCC------eeeEEEeCcccceeEEEEcCCC-CEEEEecC
Q 019006 49 PIMLLTGHQSAVYTMKFNP-AGTVIASGSHDRDIFLWHVHGDC------KNFMVLKGHKNAILDLHWTTDG-SQIISASP 120 (347)
Q Consensus 49 ~~~~~~~h~~~V~~v~~~~-~~~~l~s~~~d~~v~~w~~~~~~------~~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~ 120 (347)
....+.+|.+.|++++|+| ++.+||+|+.||.|++|++.... .....+.+|...|.+++|+|++ .+|++++.
T Consensus 73 ~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~ 152 (402)
T 2aq5_A 73 NVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGC 152 (402)
T ss_dssp TCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEET
T ss_pred CCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcC
Confidence 3445789999999999999 89999999999999999986432 3456788999999999999998 69999999
Q ss_pred CCeEEEEECCCCceeeee--eccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeec-C-CCC-ceEEEEEcCC
Q 019006 121 DKTLRAWDVETGKQIKKM--AEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTF-P-DKY-QITAVSFSDA 195 (347)
Q Consensus 121 dg~i~iwd~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~-~-~~~-~v~~~~~~~~ 195 (347)
||.|++||+.+++.+..+ ..|...+.++++++++ .++++++.|+.|++||++++..+..+ . +.. .+.++.|+|+
T Consensus 153 dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (402)
T 2aq5_A 153 DNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDG-ALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSE 231 (402)
T ss_dssp TSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTS-SCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECST
T ss_pred CCEEEEEECCCCCccEEEecCCCCCceEEEEECCCC-CEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCC
Confidence 999999999999988888 7788999999998865 57889999999999999998887776 3 333 4899999999
Q ss_pred CCeEEEE---ecCCcEEEEeCCCCce-EEE-ecCCCCceeEEEECCCCCEEEE-EcCCCcEEEEeCCCCCCcCceeEEEe
Q 019006 196 SDKIYTG---GIDNDVKVWDLRKGEV-SMT-LQGHQDMITGMSLSPDGSYLLT-NGMDCKLCIWDMRPYAPQNRCVKILE 269 (347)
Q Consensus 196 ~~~l~~~---~~dg~i~iwd~~~~~~-~~~-~~~~~~~i~~v~~~~~~~~l~t-~~~d~~i~~wd~~~~~~~~~~~~~~~ 269 (347)
+.++++| +.|+.|++||+++++. ... ...|...+.+++|+|++++|++ ++.|+.|++||+....+ .+..+.
T Consensus 232 ~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~---~~~~l~ 308 (402)
T 2aq5_A 232 GKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAP---FLHYLS 308 (402)
T ss_dssp TEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTT---CEEEEE
T ss_pred CcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCc---ceEeec
Confidence 9999998 7999999999987654 222 2246677999999999999975 55799999999986432 133343
Q ss_pred ccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCCcee
Q 019006 270 GHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRI 310 (347)
Q Consensus 270 ~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~ 310 (347)
.+. ....+.+++|+|++.++++ .++.+++|++.++.+
T Consensus 309 ~~~--~~~~v~~~~~sp~~~~~~s--~~~~~~~~~l~~~~~ 345 (402)
T 2aq5_A 309 MFS--SKESQRGMGYMPKRGLEVN--KCEIARFYKLHERKC 345 (402)
T ss_dssp EEC--CSSCCSEEEECCGGGSCGG--GTEEEEEEEEETTEE
T ss_pred ccc--cCCcccceEEeccccccee--cceeEEEEEcCCCcE
Confidence 332 2357889999999998875 456999999987654
No 115
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=1.3e-30 Score=232.22 Aligned_cols=284 Identities=14% Similarity=0.124 Sum_probs=222.9
Q ss_pred eeEecCccccEEEEEECCCCCeE-EEeeCCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEE-EecCCCeEEEE
Q 019006 50 IMLLTGHQSAVYTMKFNPAGTVI-ASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQII-SASPDKTLRAW 127 (347)
Q Consensus 50 ~~~~~~h~~~V~~v~~~~~~~~l-~s~~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-s~~~dg~i~iw 127 (347)
+..+.+|. .+.+++|+|+++.| ++++.|+.|++|++.. .+....+..+. .+.+++|+|++++|+ +++.|+.|++|
T Consensus 25 ~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~-~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~ 101 (391)
T 1l0q_A 25 TATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTAT-NNVIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVI 101 (391)
T ss_dssp EEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTT-TEEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred EEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCC-CeEEEEEECCC-CccceEECCCCCEEEEEECCCCEEEEE
Confidence 34455664 58999999999876 6777999999999854 34444555544 899999999999875 55577999999
Q ss_pred ECCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeecCCCCceEEEEEcCCCCeE-EEEecCC
Q 019006 128 DVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKI-YTGGIDN 206 (347)
Q Consensus 128 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~dg 206 (347)
|+.+++.+..+..+ ..+..+++++++..++++++.++.|++||+.+++.+..+.....+..++|+|+++.+ ++++.++
T Consensus 102 d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~ 180 (391)
T 1l0q_A 102 DTTSNTVAGTVKTG-KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSM 180 (391)
T ss_dssp ETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTT
T ss_pred ECCCCeEEEEEeCC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCCCcceEEECCCCCEEEEEeCCCC
Confidence 99998887766544 456778888887666689999999999999988888877777778999999999987 5677889
Q ss_pred cEEEEeCCCCceEEEecCCCCceeEEEECCCCCEEEEEc---CCCcEEEEeCCCCCCcCceeEEEeccccccccceEEEE
Q 019006 207 DVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNG---MDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCG 283 (347)
Q Consensus 207 ~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~---~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (347)
.|++||+++++....+.. ...+.+++|+|+++++++++ .++.|++||+... ..+..+..+ ..+..++
T Consensus 181 ~v~~~d~~~~~~~~~~~~-~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~----~~~~~~~~~-----~~~~~~~ 250 (391)
T 1l0q_A 181 SISVIDTVTNSVIDTVKV-EAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTN----KITARIPVG-----PDPAGIA 250 (391)
T ss_dssp EEEEEETTTTEEEEEEEC-SSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTT----EEEEEEECC-----SSEEEEE
T ss_pred EEEEEECCCCeEEEEEec-CCCccceEECCCCCEEEEEecCcCCCcEEEEECCCC----eEEEEEecC-----CCccEEE
Confidence 999999999887776654 46789999999999999887 6899999998743 344455443 2467899
Q ss_pred ECCCCCEE-EEeeCCCeEEEEeCCCceeeEEecCCccCee---eEEEcC------------CC----------CEEEEec
Q 019006 284 WSPDGSKV-TAGSSDRMVYIWDTTSRRILYKLPGHTGSVN---ESVFHA------------TE----------PVIGSCS 337 (347)
Q Consensus 284 ~s~~g~~l-~sgs~dg~i~vwd~~~~~~~~~~~~h~~~v~---~~~~~~------------~~----------~~l~s~s 337 (347)
|+|+|++| ++++.|+.|++||+.+++++..+..|..+.. .+.+.| +. ..+.+.+
T Consensus 251 ~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fs~~~~~~~~~~~~~~~~~~~~ 330 (391)
T 1l0q_A 251 VTPDGKKVYVALSFXNTVSVIDTATNTITATMAVGKNPYASGQFIGSIPVQPVYPSADFKSNITSGYIFLSEPVQFTDLS 330 (391)
T ss_dssp ECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEECCSSCEEECSSCCCCCBCCEEESCCSSEEETTCCEEEEECC
T ss_pred EccCCCEEEEEcCCCCEEEEEECCCCcEEEEEECCcCCCccceeeecccccccccccccccccccccccccceEEEEeCC
Confidence 99999988 6778899999999999999988877754321 122222 11 3466777
Q ss_pred CCCcEEeecC
Q 019006 338 SDKQIYLGEI 347 (347)
Q Consensus 338 ~D~~i~i~~~ 347 (347)
.|..+++||+
T Consensus 331 ~~~~~~~W~~ 340 (391)
T 1l0q_A 331 KDATEWKWDF 340 (391)
T ss_dssp BSCSEEEEEC
T ss_pred CCceEEEEEC
Confidence 8999999985
No 116
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=2.5e-32 Score=240.35 Aligned_cols=240 Identities=11% Similarity=0.116 Sum_probs=183.9
Q ss_pred eEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEECCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeC
Q 019006 93 FMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDM 172 (347)
Q Consensus 93 ~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~ 172 (347)
+.....|...|.+++|+|+|++|++|+.|+ +++|++.+++.......+ .+..+.+.+....++++++.|++|++||.
T Consensus 12 ~~~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~d~~v~iWd~ 88 (355)
T 3vu4_A 12 IVPENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQEMR--HLSKVRMLHRTNYVAFVTGVKEVVHIWDD 88 (355)
T ss_dssp -------CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEEECS--CCCEEEECTTSSEEEEECSSTTEEEEEET
T ss_pred ccccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeeeecC--CeEEEEEcCCCCEEEEEECCccEEEEEEC
Confidence 345678999999999999999999988775 789999887665443322 24445555555555678888999999999
Q ss_pred CCCCceeecCCCCceEEEEEcCCCCeEEEEecCCcEEEEeCCCC-ceEEEecCCCCceeEEEECCCCCEEEE--EcCCCc
Q 019006 173 RQRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKG-EVSMTLQGHQDMITGMSLSPDGSYLLT--NGMDCK 249 (347)
Q Consensus 173 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~i~~v~~~~~~~~l~t--~~~d~~ 249 (347)
.+++.+..+.+...+.++.++++. ++++ .++.|++||+.++ +....+.. ....+++++ .+++. ++.||.
T Consensus 89 ~~~~~~~~~~~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~~~~~---~~~~~~~s~--~~la~~sg~~~g~ 160 (355)
T 3vu4_A 89 VKKQDVSRIKVDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKRITDDIR---FGGVCEFSN--GLLVYSNEFNLGQ 160 (355)
T ss_dssp TTTEEEEEEECSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCBSSCCEE---EEEEEEEET--TEEEEEESSCTTC
T ss_pred CCCcEEEEEECCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCceeeEEecc---CCceEEEEc--cEEEEeCCCcCcE
Confidence 999888888887899999998753 4433 4789999999887 55544443 344556666 56666 588999
Q ss_pred EEEEeCCCCCCc----C-------c-eeEEEeccccccccceEEEEECCCCCEEEEeeCCCe-EEEEeCCCceeeEEec-
Q 019006 250 LCIWDMRPYAPQ----N-------R-CVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRM-VYIWDTTSRRILYKLP- 315 (347)
Q Consensus 250 i~~wd~~~~~~~----~-------~-~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~-i~vwd~~~~~~~~~~~- 315 (347)
|++||++..... . . +...+.+| ...|.+++|+|+|++|++|+.||. |++||+.+++++..+.
T Consensus 161 v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h----~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~ 236 (355)
T 3vu4_A 161 IHITKLQSSGSATTQDQGVQQKAILGKGVLIKAH----TNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRR 236 (355)
T ss_dssp EEEEECCC------------------CCEEECCC----SSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEEC
T ss_pred EEEEECCCCCccccccccccccccCcccEEEEcc----CCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEc
Confidence 999999753200 0 0 14455555 357999999999999999999998 9999999999999998
Q ss_pred C-CccCeeeEEEcCCCCEEEEecCCCcEEeecC
Q 019006 316 G-HTGSVNESVFHATEPVIGSCSSDKQIYLGEI 347 (347)
Q Consensus 316 ~-h~~~v~~~~~~~~~~~l~s~s~D~~i~i~~~ 347 (347)
+ |...|.+++|+|++++|++++.|++|++||+
T Consensus 237 g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~ 269 (355)
T 3vu4_A 237 GLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEI 269 (355)
T ss_dssp TTCCSCEEEEEECTTSCEEEEEETTCEEEEEES
T ss_pred CCCCCcEEEEEECCCCCEEEEEECCCEEEEEEc
Confidence 6 9999999999999999999999999999985
No 117
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=1.8e-30 Score=224.37 Aligned_cols=245 Identities=18% Similarity=0.344 Sum_probs=199.7
Q ss_pred EecCccccEEEEEECCCCCeEEEeeCCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEECCC
Q 019006 52 LLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVET 131 (347)
Q Consensus 52 ~~~~h~~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 131 (347)
.+.+|...|++++|+|++++||+|+.||+|++|++.. .+....+.+|...+.++.+ ++..+++++.++.+++|+...
T Consensus 62 ~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~-~~~~~~~~~h~~~~~~~~~--~~~~l~s~~~~~~~~~~~~~~ 138 (318)
T 4ggc_A 62 QMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQ-QKRLRNMTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRV 138 (318)
T ss_dssp ECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTT-TEEEEEEECCSSCEEEEEE--ETTEEEEEETTSEEEEEETTS
T ss_pred EecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCC-ceeEEEecCccceEEEeec--CCCEEEEEecCCceEeeecCC
Confidence 3457888999999999999999999999999999964 4566778899988887655 467999999999999999876
Q ss_pred C-ceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCcee-----ecCCCCceEEEEEcCCCCeE---EEE
Q 019006 132 G-KQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQ-----TFPDKYQITAVSFSDASDKI---YTG 202 (347)
Q Consensus 132 ~-~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~-----~~~~~~~v~~~~~~~~~~~l---~~~ 202 (347)
. ..+..+..|...+..+.+.+.+ .++++++.|++|++||+++++... ...+...+.++.+.+.+..+ +++
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~-~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 217 (318)
T 4ggc_A 139 AEHHVATLSGHSQEVCGLRWAPDG-RHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGG 217 (318)
T ss_dssp SSCEEEEEECCSSCEEEEEECTTS-SEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEEC
T ss_pred CceeEEEEcCccCceEEEEEcCCC-CEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEec
Confidence 5 4456677788888877777665 588999999999999998765322 22345678999999887644 356
Q ss_pred ecCCcEEEEeCCCCceEEEecCCCCceeEEEECCCCCEEEEEc--CCCcEEEEeCCCCCCcCceeEEEeccccccccceE
Q 019006 203 GIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNG--MDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLL 280 (347)
Q Consensus 203 ~~dg~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~--~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (347)
+.++.|++||.+......... +...+..+.|+|+++.+++++ .|+.|++||++. ..++..+.+|. ..|.
T Consensus 218 ~~~~~i~lwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~----~~~~~~l~gH~----~~V~ 288 (318)
T 4ggc_A 218 TSDRHIRIWNVCSGACLSAVD-AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPT----MAKVAELKGHT----SRVL 288 (318)
T ss_dssp TTTCEEEEEETTTCCEEEEEE-CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTT----CCEEEEECCCS----SCEE
T ss_pred CCCCEEEEEeccccccccccc-ceeeeeeeeecccccceEEEEEcCCCEEEEEECCC----CcEEEEEcCCC----CCEE
Confidence 788999999998887665554 556789999999999887654 799999999874 35567777764 5799
Q ss_pred EEEECCCCCEEEEeeCCCeEEEEeCCCce
Q 019006 281 KCGWSPDGSKVTAGSSDRMVYIWDTTSRR 309 (347)
Q Consensus 281 ~~~~s~~g~~l~sgs~dg~i~vwd~~~~~ 309 (347)
+++|+|+|++|++||.||.|+|||+.+.+
T Consensus 289 ~l~~spdg~~l~S~s~D~~v~iWd~~~~d 317 (318)
T 4ggc_A 289 SLTMSPDGATVASAAADETLRLWRCFELD 317 (318)
T ss_dssp EEEECTTSSCEEEEETTTEEEEECCSCCC
T ss_pred EEEEcCCCCEEEEEecCCeEEEEECCCCC
Confidence 99999999999999999999999987543
No 118
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=2.8e-31 Score=240.08 Aligned_cols=230 Identities=23% Similarity=0.406 Sum_probs=200.8
Q ss_pred eCcccceeEEEEcCCCCEEEEecCCCeEEEEECCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCC
Q 019006 97 KGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRG 176 (347)
Q Consensus 97 ~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~ 176 (347)
.+|...|.++.| ++++|++|+.||.|++||+.+++....+..|...|.++.+ ++.++++|+.||+|++||+.++.
T Consensus 130 ~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~---~~~~l~sg~~dg~i~vwd~~~~~ 204 (435)
T 1p22_A 130 SETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY---DERVIITGSSDSTVRVWDVNTGE 204 (435)
T ss_dssp CSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC---CSSEEEEEETTSCEEEEESSSCC
T ss_pred cCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE---CCCEEEEEcCCCeEEEEECCCCc
Confidence 456677888877 6889999999999999999999999999999999988877 34689999999999999999988
Q ss_pred ceeecC-CCCceEEEEEcCCCCeEEEEecCCcEEEEeCCCCceE---EEecCCCCceeEEEECCCCCEEEEEcCCCcEEE
Q 019006 177 AIQTFP-DKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVS---MTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCI 252 (347)
Q Consensus 177 ~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~---~~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~ 252 (347)
.+..+. +...+.++.|++ +.+++|+.||.|++||++++... ..+.+|...|.+++| +++++++++.|+.|++
T Consensus 205 ~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~v 280 (435)
T 1p22_A 205 MLNTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKV 280 (435)
T ss_dssp EEEEECCCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEE
T ss_pred EEEEEcCCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEE
Confidence 877765 456799999974 69999999999999999887654 677889999999999 7889999999999999
Q ss_pred EeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCCceeeEEecCCccCeeeEEEcCCCCE
Q 019006 253 WDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPV 332 (347)
Q Consensus 253 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 332 (347)
||++. ..++..+.+|. ..+.++.| ++.+|++|+.||.|++||+.+++.+..+.+|...|.+++| ++.+
T Consensus 281 wd~~~----~~~~~~~~~~~----~~v~~~~~--~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~ 348 (435)
T 1p22_A 281 WNTST----CEFVRTLNGHK----RGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKR 348 (435)
T ss_dssp EETTT----CCEEEEEECCS----SCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEC--CSSE
T ss_pred EECCc----CcEEEEEcCCC----CcEEEEEe--CCCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe--cCCE
Confidence 99974 34556666553 45777777 5789999999999999999999999999999999999999 7889
Q ss_pred EEEecCCCcEEeecC
Q 019006 333 IGSCSSDKQIYLGEI 347 (347)
Q Consensus 333 l~s~s~D~~i~i~~~ 347 (347)
|++++.||.|++||+
T Consensus 349 l~sg~~dg~i~vwd~ 363 (435)
T 1p22_A 349 IVSGAYDGKIKVWDL 363 (435)
T ss_dssp EEEEETTSCEEEEEH
T ss_pred EEEEeCCCcEEEEEC
Confidence 999999999999984
No 119
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.1e-31 Score=236.24 Aligned_cols=247 Identities=21% Similarity=0.305 Sum_probs=202.7
Q ss_pred eeeEEEeCcccceeEEEEcCC---CCEEEEecCCCeEEEEECCC-Ccee-eeeeccCcceeEeecCCCCCCEEEEEcCCC
Q 019006 91 KNFMVLKGHKNAILDLHWTTD---GSQIISASPDKTLRAWDVET-GKQI-KKMAEHNSFVNSCCPSRRGPPLVVSGSDDG 165 (347)
Q Consensus 91 ~~~~~~~~h~~~v~~~~~~~~---~~~l~s~~~dg~i~iwd~~~-~~~~-~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~ 165 (347)
..+..+.+|...|.+++|+|+ |++|++++.||.|++||+.+ +..+ ..+..|...+..+++++++ .++++++.|+
T Consensus 30 ~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~dg 108 (368)
T 3mmy_A 30 KDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDG-SKVFTASCDK 108 (368)
T ss_dssp CCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTS-SEEEEEETTS
T ss_pred ceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCC-CEEEEEcCCC
Confidence 445667899999999999999 59999999999999999987 5544 6777899999999998854 5888999999
Q ss_pred ceEEEeCCCCCceeecCCCCceEEEEE--cCCCCeEEEEecCCcEEEEeCCCCceEEEecCCCCceeEEEECCCCCEEEE
Q 019006 166 TAKLWDMRQRGAIQTFPDKYQITAVSF--SDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLT 243 (347)
Q Consensus 166 ~i~iwd~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~t 243 (347)
.|++||+.++..+....+...+.++.| ++++..+++++.||.|++||+++++....+..+. .+.++.+. ...+++
T Consensus 109 ~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~ 185 (368)
T 3mmy_A 109 TAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPE-RCYCADVI--YPMAVV 185 (368)
T ss_dssp EEEEEETTTTEEEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSS-CEEEEEEE--TTEEEE
T ss_pred cEEEEEcCCCCceeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCC-CceEEEec--CCeeEE
Confidence 999999999888887788889999999 8999999999999999999999998888887765 45666665 458888
Q ss_pred EcCCCcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCE----EEEeeCCCeEEEEeCCCc---eeeEEecC
Q 019006 244 NGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSK----VTAGSSDRMVYIWDTTSR---RILYKLPG 316 (347)
Q Consensus 244 ~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~----l~sgs~dg~i~vwd~~~~---~~~~~~~~ 316 (347)
++.++.+.+||++... ........ ........+.+.++... +++|+.||.|++||+... ..+..+.+
T Consensus 186 ~~~~~~i~~~~~~~~~---~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~ 259 (368)
T 3mmy_A 186 ATAERGLIVYQLENQP---SEFRRIES---PLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKC 259 (368)
T ss_dssp EEGGGCEEEEECSSSC---EEEEECCC---SCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEEC
T ss_pred EeCCCcEEEEEecccc---chhhhccc---cccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeee
Confidence 8999999999997532 11121111 11223444444444433 999999999999999887 56778888
Q ss_pred Ccc------------CeeeEEEcCCCCEEEEecCCCcEEeecC
Q 019006 317 HTG------------SVNESVFHATEPVIGSCSSDKQIYLGEI 347 (347)
Q Consensus 317 h~~------------~v~~~~~~~~~~~l~s~s~D~~i~i~~~ 347 (347)
|.. .|.+++|+|++++|++++.||.|++||+
T Consensus 260 ~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~ 302 (368)
T 3mmy_A 260 HRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDK 302 (368)
T ss_dssp SEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEET
T ss_pred eecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEEC
Confidence 887 7999999999999999999999999985
No 120
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-31 Score=243.64 Aligned_cols=237 Identities=15% Similarity=0.208 Sum_probs=197.1
Q ss_pred cceeEEEEcCCCCEEEEecCCCeEEEEECCCCc---eeeeeecc------------------------------------
Q 019006 101 NAILDLHWTTDGSQIISASPDKTLRAWDVETGK---QIKKMAEH------------------------------------ 141 (347)
Q Consensus 101 ~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~---~~~~~~~~------------------------------------ 141 (347)
.++.+++|+++|++|+++ .++.|++||+.+++ .+..+..+
T Consensus 5 ~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (450)
T 2vdu_B 5 HPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDS 83 (450)
T ss_dssp CCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC-----------------------------------
T ss_pred ccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCcc
Confidence 478899999999966655 57899999999888 55444322
Q ss_pred ------------------CcceeEeecCCCCCCEEEEEcCCCceEEEeCC--CCCceeec---CCCCceEEEEEcCCCCe
Q 019006 142 ------------------NSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMR--QRGAIQTF---PDKYQITAVSFSDASDK 198 (347)
Q Consensus 142 ------------------~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~--~~~~~~~~---~~~~~v~~~~~~~~~~~ 198 (347)
...|.++++++++..++++++.|+.|++||+. ++..+..+ .+...+.+++|+|++.+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~ 163 (450)
T 2vdu_B 84 IKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTT 163 (450)
T ss_dssp ----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSE
T ss_pred ccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCE
Confidence 22578888888876556899999999999998 77777665 44578999999999999
Q ss_pred EEEEecCCcEEEEeCCCCceEE----EecCCCCceeEEEECCC---CCEEEEEcCCCcEEEEeCCCCCCcCceeEE-Eec
Q 019006 199 IYTGGIDNDVKVWDLRKGEVSM----TLQGHQDMITGMSLSPD---GSYLLTNGMDCKLCIWDMRPYAPQNRCVKI-LEG 270 (347)
Q Consensus 199 l~~~~~dg~i~iwd~~~~~~~~----~~~~~~~~i~~v~~~~~---~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~-~~~ 270 (347)
|++++.+|.|++|++.+++... .+.+|...|++++|+|+ +++|++++.|+.|++||++.. .++.. +.+
T Consensus 164 l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~----~~~~~~~~~ 239 (450)
T 2vdu_B 164 VIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQC----FIVDKWLFG 239 (450)
T ss_dssp EEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCT----TCEEEECCC
T ss_pred EEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCC----ceeeeeecC
Confidence 9999999999999998776443 67789999999999999 999999999999999998743 23333 334
Q ss_pred cccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCCceeeEEecCC-------------------------ccCeeeEE
Q 019006 271 HQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGH-------------------------TGSVNESV 325 (347)
Q Consensus 271 ~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~~~~~~h-------------------------~~~v~~~~ 325 (347)
| ...+.+++|+ ++++|++|+.|+.|++||+.+++++..+..+ ...|..++
T Consensus 240 h----~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~ 314 (450)
T 2vdu_B 240 H----KHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKII 314 (450)
T ss_dssp C----SSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEE
T ss_pred C----CCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEE
Confidence 4 3578999999 9999999999999999999999988877633 35689999
Q ss_pred EcCCCCEEEEec-CCCcEEeecC
Q 019006 326 FHATEPVIGSCS-SDKQIYLGEI 347 (347)
Q Consensus 326 ~~~~~~~l~s~s-~D~~i~i~~~ 347 (347)
|+|++++|++++ .|+.|++|++
T Consensus 315 ~~~~~~~l~~~~~~d~~i~iw~~ 337 (450)
T 2vdu_B 315 KSKNLPFVAFFVEATKCIIILEM 337 (450)
T ss_dssp ECSSSSEEEEEETTCSEEEEEEE
T ss_pred EeCCCCEEEEEECCCCeEEEEEe
Confidence 999999999998 8999999985
No 121
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.5e-32 Score=238.36 Aligned_cols=226 Identities=8% Similarity=0.023 Sum_probs=177.5
Q ss_pred EcCCCCEEEEecCCCeEEEEECCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCC---------CCCce
Q 019006 108 WTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMR---------QRGAI 178 (347)
Q Consensus 108 ~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~---------~~~~~ 178 (347)
+.+++.+|++|+.||+|++||+.+++.+..+. ...+..+.+++. +++++.|+++++|+.. ++..+
T Consensus 44 ~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~----~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~ 117 (343)
T 3lrv_A 44 MYYDKWVCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHPA----IISRGPCNRLLLLYPGNQITILDSKTNKVL 117 (343)
T ss_dssp SSEEEEEEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCCS----EEEECSTTEEEEEETTTEEEEEETTTCCEE
T ss_pred hcCCCCEEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCCc----eEEecCCCeEEEEEccCceEEeecCCccee
Confidence 44577899999999999999999998877765 334444555543 8899999999999765 33333
Q ss_pred eec--CCCCceEEEEEcC--CCCeEEEEecCCcEEEEeCCCCceEEEec-CCCCceeEEEECCCCCEEEEEcCCCcEEEE
Q 019006 179 QTF--PDKYQITAVSFSD--ASDKIYTGGIDNDVKVWDLRKGEVSMTLQ-GHQDMITGMSLSPDGSYLLTNGMDCKLCIW 253 (347)
Q Consensus 179 ~~~--~~~~~v~~~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~~i~~v~~~~~~~~l~t~~~d~~i~~w 253 (347)
..+ .+...|.+++|+| +++++++++.||.|++||+++++...... .|...+.+++|+|++++|++|+.|+.|++|
T Consensus 118 ~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iw 197 (343)
T 3lrv_A 118 REIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVY 197 (343)
T ss_dssp EEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEE
T ss_pred EEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEE
Confidence 333 3446799999999 99999999999999999999988866553 345579999999999999999999999999
Q ss_pred eCCCCCCcCceeEEEec-cccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCCceeeEEecC---CccCee--eEEEc
Q 019006 254 DMRPYAPQNRCVKILEG-HQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPG---HTGSVN--ESVFH 327 (347)
Q Consensus 254 d~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~~~~~~---h~~~v~--~~~~~ 327 (347)
|++..... ...+.. | ...+.+++|+|+|.+|++|+. +.|++||+++++.+..+.. |...+. .++|+
T Consensus 198 d~~~~~~~---~~~~~~~h----~~~v~~l~fs~~g~~l~s~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (343)
T 3lrv_A 198 NLSSPDQA---SSRFPVDE----EAKIKEVKFADNGYWMVVECD-QTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDID 269 (343)
T ss_dssp ESSCTTSC---CEECCCCT----TSCEEEEEECTTSSEEEEEES-SBEEEEETTSSTTCBSSCCCBC-----CCEEEEEC
T ss_pred ECCCCCCC---ccEEeccC----CCCEEEEEEeCCCCEEEEEeC-CeEEEEEcCCCCcceeecccccccccccceEEEEC
Confidence 99864321 133443 3 367999999999999999994 5999999999877655544 445555 59999
Q ss_pred CCCCEEEEecC-CCcEEeecC
Q 019006 328 ATEPVIGSCSS-DKQIYLGEI 347 (347)
Q Consensus 328 ~~~~~l~s~s~-D~~i~i~~~ 347 (347)
|++++|++++. |+.|++|++
T Consensus 270 ~~g~~l~~~s~~d~~i~v~~~ 290 (343)
T 3lrv_A 270 DSGKNMIAYSNESNSLTIYKF 290 (343)
T ss_dssp TTSSEEEEEETTTTEEEEEEE
T ss_pred CCCCEEEEecCCCCcEEEEEE
Confidence 99999999998 999999963
No 122
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=100.00 E-value=1.7e-30 Score=220.92 Aligned_cols=274 Identities=14% Similarity=0.174 Sum_probs=182.6
Q ss_pred cEEEEEECCCCC---eEEEeeCCCcEEEEeccCC--CeeeEEEeCcccceeEEEEcCCCCEEEEec--CCCeEEEEECC-
Q 019006 59 AVYTMKFNPAGT---VIASGSHDRDIFLWHVHGD--CKNFMVLKGHKNAILDLHWTTDGSQIISAS--PDKTLRAWDVE- 130 (347)
Q Consensus 59 ~V~~v~~~~~~~---~l~s~~~d~~v~~w~~~~~--~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~--~dg~i~iwd~~- 130 (347)
.+.+|-|-..|- -++++++ ..|++|+.... .+....+.+|..+|..+.+.||..-|++.. .=..-.++-+.
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~-~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~ 119 (356)
T 2w18_A 41 DVSAMFWERAGCKEPCIITACE-DVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFC 119 (356)
T ss_dssp EEEEEEEC----CEEEEEEEES-SEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC
T ss_pred EEeeeeeccCCCCccEEEEecc-ceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEE
Confidence 466777766553 4556655 68999999653 266778889998888888888644333221 11111111111
Q ss_pred -CC----ceeeeeeccCcceeEeecCCCCCCEEEEEc--CCCceEEEeCCC-CCceeec-CCCCceEEEEEcC---CCCe
Q 019006 131 -TG----KQIKKMAEHNSFVNSCCPSRRGPPLVVSGS--DDGTAKLWDMRQ-RGAIQTF-PDKYQITAVSFSD---ASDK 198 (347)
Q Consensus 131 -~~----~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~--~d~~i~iwd~~~-~~~~~~~-~~~~~v~~~~~~~---~~~~ 198 (347)
.. ........+...+..+ .+..++.++. .|+.|++|++.. ++.+..+ .+...+..++|++ ++..
T Consensus 120 spd~~~~~~~l~s~g~~~~v~~l----~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~ 195 (356)
T 2w18_A 120 SSDDESEKQVLLKSGNIKAVLGL----TKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEA 195 (356)
T ss_dssp ------CCEEEEEEEEEEEEEEE----TTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTE
T ss_pred CCCccccccEEEeCCCeEEEEec----CCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCce
Confidence 00 1111111122223222 2334555533 599999999954 5554443 3445677788887 6789
Q ss_pred EEEEecCCcEEEEeCCCCceEEEecCCCC---ceeEEEECCCCCEE------------EEEcCCCcEEEEeCCCCCCcCc
Q 019006 199 IYTGGIDNDVKVWDLRKGEVSMTLQGHQD---MITGMSLSPDGSYL------------LTNGMDCKLCIWDMRPYAPQNR 263 (347)
Q Consensus 199 l~~~~~dg~i~iwd~~~~~~~~~~~~~~~---~i~~v~~~~~~~~l------------~t~~~d~~i~~wd~~~~~~~~~ 263 (347)
+++++.|++|++||++++++..++.+|.. .+.+++|+|++.++ ++|+.|++|++||... ..
T Consensus 196 LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~t----gk 271 (356)
T 2w18_A 196 LLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKT----TL 271 (356)
T ss_dssp EEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTT----TE
T ss_pred EEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCC----CE
Confidence 99999999999999999999999986543 56777999999876 5678899999999874 23
Q ss_pred eeEEE-----eccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCCceeeEEecCCccCee-eEEEcCCCCEEEEec
Q 019006 264 CVKIL-----EGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVN-ESVFHATEPVIGSCS 337 (347)
Q Consensus 264 ~~~~~-----~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~v~-~~~~~~~~~~l~s~s 337 (347)
++..+ .+|. ..+.+..+ ++.++++|+.||+|+|||+.+++++.++.+|...+. .++|+|++++|+|++
T Consensus 272 ~l~v~~~~~p~Gh~----~~~lsg~~--sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS 345 (356)
T 2w18_A 272 SVGVMLYCLPPGQA----GRFLEGDV--KDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQ 345 (356)
T ss_dssp EEEEEEECCCTTCC----CCEEEEEE--ETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEEC
T ss_pred EEEEEEeeccCCCc----ceeEcccc--CCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEE
Confidence 33332 1222 22333333 388999999999999999999999999999988766 589999999999999
Q ss_pred CCCcEEeecC
Q 019006 338 SDKQIYLGEI 347 (347)
Q Consensus 338 ~D~~i~i~~~ 347 (347)
.|++|+|||+
T Consensus 346 ~D~TIklWd~ 355 (356)
T 2w18_A 346 KDGNIFVYHY 355 (356)
T ss_dssp TTSCEEEEEE
T ss_pred CCCcEEEecC
Confidence 9999999984
No 123
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.98 E-value=4.2e-30 Score=224.16 Aligned_cols=257 Identities=15% Similarity=0.215 Sum_probs=179.3
Q ss_pred CeeEecCccccEEEEEECC--CCCeEEEeeCCCcEEEEeccCCC--------eeeEEEeCcccceeEEEEcCC--CCEEE
Q 019006 49 PIMLLTGHQSAVYTMKFNP--AGTVIASGSHDRDIFLWHVHGDC--------KNFMVLKGHKNAILDLHWTTD--GSQII 116 (347)
Q Consensus 49 ~~~~~~~h~~~V~~v~~~~--~~~~l~s~~~d~~v~~w~~~~~~--------~~~~~~~~h~~~v~~~~~~~~--~~~l~ 116 (347)
....+.+|...|.+++|+| ++.+|++|+.||.|++|++.... .....+.+|...|.+++|+|+ +.+|+
T Consensus 49 ~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~ 128 (351)
T 3f3f_A 49 LSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLA 128 (351)
T ss_dssp EEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEE
T ss_pred ecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEE
Confidence 3456789999999999999 69999999999999999996432 445678899999999999999 99999
Q ss_pred EecCCCeEEEEECCCCceeeeee-------------ccCcceeEeecCCC--CCCEEEEEcCCCceEEEeCCCCCc--ee
Q 019006 117 SASPDKTLRAWDVETGKQIKKMA-------------EHNSFVNSCCPSRR--GPPLVVSGSDDGTAKLWDMRQRGA--IQ 179 (347)
Q Consensus 117 s~~~dg~i~iwd~~~~~~~~~~~-------------~~~~~v~~~~~~~~--~~~~~~s~~~d~~i~iwd~~~~~~--~~ 179 (347)
+++.||.|++||+.+++.+..+. .+...+..+.+.+. ...++++++.++.+.+|+...+.. +.
T Consensus 129 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 208 (351)
T 3f3f_A 129 CLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAA 208 (351)
T ss_dssp EEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEE
T ss_pred EecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeee
Confidence 99999999999998876544332 35556677777765 457899999999998888776654 34
Q ss_pred ecC-CCCceEEEEEcCCC----CeEEEEecCCcEEEEeCCCCceEEEecCCCCceeEEEECCCCCEEEEEcC----CCcE
Q 019006 180 TFP-DKYQITAVSFSDAS----DKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGM----DCKL 250 (347)
Q Consensus 180 ~~~-~~~~v~~~~~~~~~----~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~~----d~~i 250 (347)
.+. +...|.+++|+|++ .++++++.||.|++||++.+........+..........+....+..+.. ...+
T Consensus 209 ~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (351)
T 3f3f_A 209 KLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKA 288 (351)
T ss_dssp ECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC-------------------------------------
T ss_pred ecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceee
Confidence 443 56789999999998 78999999999999999876554444333333334444444444444332 3334
Q ss_pred EEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCCceeeEE
Q 019006 251 CIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYK 313 (347)
Q Consensus 251 ~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~~~ 313 (347)
.+|+.. ....+..+.+| ...+.+++|+|++++|++|+.||.|++||+.+++.+..
T Consensus 289 ~~~~~~----~~~~~~~~~~h----~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~~ 343 (351)
T 3f3f_A 289 ELQSNL----QVELLSEHDDH----NGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSNEFKC 343 (351)
T ss_dssp --CCSE----EEEEEEEECTT----SSCEEEEEECSSSCCEEEEETTSCEEEEEECTTSCEEE
T ss_pred eecccc----cccEEEEEecc----cccEEEEEEcCCCCEEEEecCCCcEEEEecCcCcchhh
Confidence 444432 23344555554 35799999999999999999999999999998765443
No 124
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.97 E-value=1.4e-29 Score=215.33 Aligned_cols=198 Identities=14% Similarity=0.092 Sum_probs=147.9
Q ss_pred ccccEEEEEECCC----CCeEEEeeC--------------------CCcEEEEeccCCCeeeEEEeCcccceeEEEEcC-
Q 019006 56 HQSAVYTMKFNPA----GTVIASGSH--------------------DRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTT- 110 (347)
Q Consensus 56 h~~~V~~v~~~~~----~~~l~s~~~--------------------d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~- 110 (347)
|...|++|+|+|+ ++.+++++. |+.|++|++..+.+....+.+|...+..++|++
T Consensus 110 ~~~~v~sla~spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~ 189 (356)
T 2w18_A 110 EIREIRALFCSSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEV 189 (356)
T ss_dssp SEEEEEEECC------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEE
T ss_pred cccceEEEEECCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeecc
Confidence 3456777788888 777777653 888999998555556667778888899999988
Q ss_pred --CCCEEEEecCCCeEEEEECCCCceeeeeeccCc---ceeEeecCCCCCC-----------EEEEEcCCCceEEEeCCC
Q 019006 111 --DGSQIISASPDKTLRAWDVETGKQIKKMAEHNS---FVNSCCPSRRGPP-----------LVVSGSDDGTAKLWDMRQ 174 (347)
Q Consensus 111 --~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~---~v~~~~~~~~~~~-----------~~~s~~~d~~i~iwd~~~ 174 (347)
++.+|++++.|++|+|||+.+++.+..+..|.. .+..+++++++.. .+++|+.|++|++||..+
T Consensus 190 ~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~t 269 (356)
T 2w18_A 190 QGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKT 269 (356)
T ss_dssp ETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTT
T ss_pred CCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCC
Confidence 779999999999999999999999999876543 3444456665432 246789999999999998
Q ss_pred CCceeec----C--CCCceEEEEEcCCCCeEEEEecCCcEEEEeCCCCceEEEecCCCCcee-EEEECCCCCEEEEEcCC
Q 019006 175 RGAIQTF----P--DKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMIT-GMSLSPDGSYLLTNGMD 247 (347)
Q Consensus 175 ~~~~~~~----~--~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~-~v~~~~~~~~l~t~~~d 247 (347)
++.+..+ + +...+.+..+ ++..+++++.|++|+|||+.++++..++.+|...+. .++|+|+|++|++|+.|
T Consensus 270 gk~l~v~~~~~p~Gh~~~~lsg~~--sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D 347 (356)
T 2w18_A 270 TLSVGVMLYCLPPGQAGRFLEGDV--KDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKD 347 (356)
T ss_dssp TEEEEEEEECCCTTCCCCEEEEEE--ETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTT
T ss_pred CEEEEEEEeeccCCCcceeEcccc--CCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECC
Confidence 8766543 2 1222333333 367899999999999999999999999999987655 58999999999999999
Q ss_pred CcEEEEeC
Q 019006 248 CKLCIWDM 255 (347)
Q Consensus 248 ~~i~~wd~ 255 (347)
++|+|||+
T Consensus 348 ~TIklWd~ 355 (356)
T 2w18_A 348 GNIFVYHY 355 (356)
T ss_dssp SCEEEEEE
T ss_pred CcEEEecC
Confidence 99999985
No 125
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.97 E-value=6.3e-28 Score=217.67 Aligned_cols=279 Identities=13% Similarity=0.148 Sum_probs=213.6
Q ss_pred ccccEEEEE---ECCCCCeEEEe--------------eCCCcEEEEeccC--C-CeeeEEEeCcccceeEEEEcCCCCEE
Q 019006 56 HQSAVYTMK---FNPAGTVIASG--------------SHDRDIFLWHVHG--D-CKNFMVLKGHKNAILDLHWTTDGSQI 115 (347)
Q Consensus 56 h~~~V~~v~---~~~~~~~l~s~--------------~~d~~v~~w~~~~--~-~~~~~~~~~h~~~v~~~~~~~~~~~l 115 (347)
....+..++ |+|++..++.. +.++.+.+|.++. . ......+..+ ..+.+++|+|++.++
T Consensus 59 ~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~ 137 (433)
T 3bws_A 59 KNIALVEMAIPVYKDEKEIELKLSSPGFQNSSYRIRKPEELNEKLIALDKEGITHRFISRFKTG-FQPKSVRFIDNTRLA 137 (433)
T ss_dssp TTEEEEEEEEECCCTTCCEEEEEECTTBCCEEEEESSGGGGTTCEEECCBTTCSEEEEEEEECS-SCBCCCEESSSSEEE
T ss_pred cCCccEEEEEeeccCCCcEEEEEEccccCcceeeecccCCCceEEEEECCCCCcceEEEEEcCC-CCceEEEEeCCCeEE
Confidence 455678888 88877765543 3334334554432 1 1333344444 456689999977788
Q ss_pred EEecCCCeEEEEECCCCceee-----eeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeecC-CCCceEE
Q 019006 116 ISASPDKTLRAWDVETGKQIK-----KMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFP-DKYQITA 189 (347)
Q Consensus 116 ~s~~~dg~i~iwd~~~~~~~~-----~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~-~~~~v~~ 189 (347)
++++.|+.|++||+.+++... .+..|...+..+.+.+. ..++++++.|+.|++||+++++.+..+. +...+.+
T Consensus 138 ~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~ 216 (433)
T 3bws_A 138 IPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEH-NELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKI 216 (433)
T ss_dssp EEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGG-TEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEE
T ss_pred EEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCC-CEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeE
Confidence 888889999999999988766 33456677888887554 4688999999999999999888777665 4567999
Q ss_pred EEEcCCCCeEEE-EecCCcEEEEeCCCCceEEEecCCCCceeEEEECCCCCEEEEEc--------CCCcEEEEeCCCCCC
Q 019006 190 VSFSDASDKIYT-GGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNG--------MDCKLCIWDMRPYAP 260 (347)
Q Consensus 190 ~~~~~~~~~l~~-~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~--------~d~~i~~wd~~~~~~ 260 (347)
++|+|+++.+++ ++.++.|++||+++++....+..+ ..+.+++|+|+++++++++ .|+.|++||++..
T Consensus 217 ~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~-- 293 (433)
T 3bws_A 217 LLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKI-GLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKE-- 293 (433)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCC-SEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTT--
T ss_pred EEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCC-CCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCC--
Confidence 999999998864 558999999999999887777664 4589999999999999888 5889999998743
Q ss_pred cCceeEEEeccccccccceEEEEECCCCCEE-EEeeCCCeEEEEeCCCceeeEEecCCccCeeeEEEcCCCCEEEEecC-
Q 019006 261 QNRCVKILEGHQHNFEKNLLKCGWSPDGSKV-TAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSS- 338 (347)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l-~sgs~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~- 338 (347)
.....+. ....+..++|+|+++.| ++++.|+.|++||+.+++.+..+. +...+..++|+|+++.+++++.
T Consensus 294 --~~~~~~~-----~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~ 365 (433)
T 3bws_A 294 --KLIDTIG-----PPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIP-VFDKPNTIALSPDGKYLYVSCRG 365 (433)
T ss_dssp --EEEEEEE-----EEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEE-CSSSEEEEEECTTSSEEEEEECC
T ss_pred --cEEeecc-----CCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEec-CCCCCCeEEEcCCCCEEEEEecC
Confidence 2222221 12357789999999755 667899999999999998888776 6778999999999998887776
Q ss_pred --------------CCcEEeecC
Q 019006 339 --------------DKQIYLGEI 347 (347)
Q Consensus 339 --------------D~~i~i~~~ 347 (347)
||.|++||+
T Consensus 366 ~~~~~~~~~~~g~~dg~v~~~d~ 388 (433)
T 3bws_A 366 PNHPTEGYLKKGLVLGKVYVIDT 388 (433)
T ss_dssp CCCTTTCTTSCCSSCCEEEEEET
T ss_pred CCccccccccccccceEEEEEEC
Confidence 579999984
No 126
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.97 E-value=1.8e-27 Score=220.14 Aligned_cols=282 Identities=13% Similarity=0.118 Sum_probs=218.9
Q ss_pred EEEEEECCCCCeEEEeeCCCcEEEEecc-CCCeeeEEEeCcccceeEEEEcC----CCCEEEEecC-CCeEEEEECCCCc
Q 019006 60 VYTMKFNPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNAILDLHWTT----DGSQIISASP-DKTLRAWDVETGK 133 (347)
Q Consensus 60 V~~v~~~~~~~~l~s~~~d~~v~~w~~~-~~~~~~~~~~~h~~~v~~~~~~~----~~~~l~s~~~-dg~i~iwd~~~~~ 133 (347)
++.++|+|+|++|++++.|++|++||+. ...+....+. +...+..++|+| +|+++++++. +++|.+||..+++
T Consensus 181 ~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~-~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~ 259 (543)
T 1nir_A 181 VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK-IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLE 259 (543)
T ss_dssp EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEE-CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCC
T ss_pred cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEe-cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccc
Confidence 8999999999999999999999999993 1234444555 345679999999 9999998884 8999999999998
Q ss_pred eeeeeecc-----------CcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCcee--ecCCCCceEEEEEcCCCCeEE
Q 019006 134 QIKKMAEH-----------NSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQ--TFPDKYQITAVSFSDASDKIY 200 (347)
Q Consensus 134 ~~~~~~~~-----------~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~ 200 (347)
.+..+..+ ...+..+.+++.+..++++...+++|.+||....+.+. .+.....+..+.|+|++++++
T Consensus 260 ~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~ 339 (543)
T 1nir_A 260 PKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFM 339 (543)
T ss_dssp EEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEE
T ss_pred cceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEE
Confidence 87776542 12566777888777888999999999999998765443 444555677899999999877
Q ss_pred EEe-cCCcEEEEeCCCCceEEEecC----CCCceeEEEECCC-CCEEEEEc-CCCcEEEEeCCCCC---CcCceeEEEec
Q 019006 201 TGG-IDNDVKVWDLRKGEVSMTLQG----HQDMITGMSLSPD-GSYLLTNG-MDCKLCIWDMRPYA---PQNRCVKILEG 270 (347)
Q Consensus 201 ~~~-~dg~i~iwd~~~~~~~~~~~~----~~~~i~~v~~~~~-~~~l~t~~-~d~~i~~wd~~~~~---~~~~~~~~~~~ 270 (347)
+++ .+++|.+||..++++...+.. |......+ ++|+ +..++++. .|++|.+||+.+.. ...++++.+..
T Consensus 340 va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~ 418 (543)
T 1nir_A 340 TAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQG 418 (543)
T ss_dssp EEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEEC
T ss_pred EEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEc
Confidence 654 688999999999998877764 54333333 4676 66667765 58999999997521 12567777776
Q ss_pred cccccccceEEEEECCCCCEEEEee-------CCCeEEEEeCCCceee-EEe--------cCCccCeeeEEEcCCCCEEE
Q 019006 271 HQHNFEKNLLKCGWSPDGSKVTAGS-------SDRMVYIWDTTSRRIL-YKL--------PGHTGSVNESVFHATEPVIG 334 (347)
Q Consensus 271 ~~~~~~~~~~~~~~s~~g~~l~sgs-------~dg~i~vwd~~~~~~~-~~~--------~~h~~~v~~~~~~~~~~~l~ 334 (347)
+. .....++++|+|++|++++ .++.|.|||..+++.. ..+ ..|...+..++|+|+++.+.
T Consensus 419 ~g----~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~ 494 (543)
T 1nir_A 419 QG----GGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVW 494 (543)
T ss_dssp SC----SCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEE
T ss_pred CC----CCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEE
Confidence 64 2356678999999999987 2779999999998877 343 46678899999999999887
Q ss_pred Ee-----cCCCcEEeecC
Q 019006 335 SC-----SSDKQIYLGEI 347 (347)
Q Consensus 335 s~-----s~D~~i~i~~~ 347 (347)
.+ +.|+.|.|||.
T Consensus 495 ~s~~~~~~~~~~i~v~D~ 512 (543)
T 1nir_A 495 FSVWNGKNDSSALVVVDD 512 (543)
T ss_dssp EEEECCTTSCCEEEEEET
T ss_pred EEeecCCCCCCeEEEEEC
Confidence 55 35899999983
No 127
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.97 E-value=3.1e-28 Score=218.60 Aligned_cols=265 Identities=15% Similarity=0.151 Sum_probs=206.2
Q ss_pred ecCccccEEEEEECC--------------CCCeEEEeeCC------CcEEEEeccCCCeeeEEEeCcccceeEEEEcCCC
Q 019006 53 LTGHQSAVYTMKFNP--------------AGTVIASGSHD------RDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDG 112 (347)
Q Consensus 53 ~~~h~~~V~~v~~~~--------------~~~~l~s~~~d------~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 112 (347)
+.+|...+..+++++ .+..++.++.+ +.|++||..+. ....+.+|...+.+++|+|+|
T Consensus 113 ~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g~--~~~~l~~~~~~v~~~~~Spdg 190 (415)
T 2hqs_A 113 YKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDGY--NQFVVHRSPQPLMSPAWSPDG 190 (415)
T ss_dssp EEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETTSC--SCEEEEEESSCEEEEEECTTS
T ss_pred EEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCCCC--CCEEEeCCCCcceeeEEcCCC
Confidence 566666666665553 25566665554 79999999653 345677899999999999999
Q ss_pred CEEEEecCCC---eEEEEECCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCCc--eEEEeCCCCCceeecCCCCce
Q 019006 113 SQIISASPDK---TLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGT--AKLWDMRQRGAIQTFPDKYQI 187 (347)
Q Consensus 113 ~~l~s~~~dg---~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~--i~iwd~~~~~~~~~~~~~~~v 187 (347)
++|++++.++ .|++||+.+++.. .+..+...+..+.+++++..++++++.++. |++||+.+++......+...+
T Consensus 191 ~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~~~~~ 269 (415)
T 2hqs_A 191 SKLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNN 269 (415)
T ss_dssp SEEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCCCSSCE
T ss_pred CEEEEEEecCCCcEEEEEECCCCcEE-EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeCcCCCCcc
Confidence 9999999885 9999999988764 466677778888999887766667777665 899999887765544556679
Q ss_pred EEEEEcCCCCeEEEEec-CC--cEEEEeCCCCceEEEecCCCCceeEEEECCCCCEEEEEcCC---CcEEEEeCCCCCCc
Q 019006 188 TAVSFSDASDKIYTGGI-DN--DVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMD---CKLCIWDMRPYAPQ 261 (347)
Q Consensus 188 ~~~~~~~~~~~l~~~~~-dg--~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~~d---~~i~~wd~~~~~~~ 261 (347)
.+++|+|+++.|+.++. ++ .|++||+.+++. ..+..+...+.+++|+|+|++|+.++.+ ..|.+||+....
T Consensus 270 ~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~-- 346 (415)
T 2hqs_A 270 TEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAP-QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGG-- 346 (415)
T ss_dssp EEEEECTTSSEEEEEECTTSSCEEEEEETTSSCC-EECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCC--
T ss_pred cceEECCCCCEEEEEECCCCCcEEEEEECCCCCE-EEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCC--
Confidence 99999999999988776 44 688889887764 3455566788999999999999988764 589999987432
Q ss_pred CceeEEEeccccccccceEEEEECCCCCEEEEeeCCC---eEEEEeCCCceeeEEecCCccCeeeEEEcCCCCE
Q 019006 262 NRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDR---MVYIWDTTSRRILYKLPGHTGSVNESVFHATEPV 332 (347)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg---~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 332 (347)
. ..+..+ ..+..++|+|||++|++++.++ .|++||+. +..+.++.+|.+.|.+++|+|..++
T Consensus 347 --~-~~l~~~-----~~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~-g~~~~~l~~~~~~v~~~~~~~~~~~ 411 (415)
T 2hqs_A 347 --V-QVLSST-----FLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTD-GRFKARLPATDGQVKFPAWSPYLHH 411 (415)
T ss_dssp --E-EECCCS-----SSCEEEEECTTSSEEEEEEEETTEEEEEEEETT-SCCEEECCCSSSEEEEEEECCCCCC
T ss_pred --E-EEecCC-----CCcCCeEEcCCCCEEEEEEcCCCccEEEEEECC-CCcEEEeeCCCCCCcCCcccccccc
Confidence 2 223322 1578899999999999988877 79999987 5556789999999999999998753
No 128
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.96 E-value=9e-28 Score=215.57 Aligned_cols=278 Identities=14% Similarity=0.033 Sum_probs=211.4
Q ss_pred ccccEEEEEECCCC-CeEEEee----CCC----cEEEEec--cCCCee-eEEEeCcccceeEEEEcC-------------
Q 019006 56 HQSAVYTMKFNPAG-TVIASGS----HDR----DIFLWHV--HGDCKN-FMVLKGHKNAILDLHWTT------------- 110 (347)
Q Consensus 56 h~~~V~~v~~~~~~-~~l~s~~----~d~----~v~~w~~--~~~~~~-~~~~~~h~~~v~~~~~~~------------- 110 (347)
+...+....|.+.| +.+++|+ .|| ++++||+ ...... ...+.+|...+..+++++
T Consensus 61 ~~~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~ 140 (415)
T 2hqs_A 61 SAQEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKG 140 (415)
T ss_dssp SGGGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCC
T ss_pred cccCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCC
Confidence 34567777888877 4666776 567 8999999 543322 245788888877776664
Q ss_pred -CCCEEEEecCC------CeEEEEECCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCC---ceEEEeCCCCCceee
Q 019006 111 -DGSQIISASPD------KTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDG---TAKLWDMRQRGAIQT 180 (347)
Q Consensus 111 -~~~~l~s~~~d------g~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~---~i~iwd~~~~~~~~~ 180 (347)
.+..++.++.+ +.|++||+.. .....+..|...+..+++++++. .+++++.++ .|++||+.+++....
T Consensus 141 ~~~~~l~~~s~~~~~~~~~~i~i~d~~g-~~~~~l~~~~~~v~~~~~Spdg~-~la~~s~~~~~~~i~~~d~~tg~~~~l 218 (415)
T 2hqs_A 141 AFRTRIAYVVQTNGGQFPYELRVSDYDG-YNQFVVHRSPQPLMSPAWSPDGS-KLAYVTFESGRSALVIQTLANGAVRQV 218 (415)
T ss_dssp CTTCEEEEEEECSSSSCCEEEEEEETTS-CSCEEEEEESSCEEEEEECTTSS-EEEEEECTTSSCEEEEEETTTCCEEEE
T ss_pred cCCCEEEEEEecCCCCccceEEEEcCCC-CCCEEEeCCCCcceeeEEcCCCC-EEEEEEecCCCcEEEEEECCCCcEEEe
Confidence 25667766654 7999999974 44567777888899999998765 667777664 999999998877655
Q ss_pred cCCCCceEEEEEcCCCCeEE-EEecCCc--EEEEeCCCCceEEEecCCCCceeEEEECCCCCEEEEEcC-CC--cEEEEe
Q 019006 181 FPDKYQITAVSFSDASDKIY-TGGIDND--VKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGM-DC--KLCIWD 254 (347)
Q Consensus 181 ~~~~~~v~~~~~~~~~~~l~-~~~~dg~--i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~~-d~--~i~~wd 254 (347)
..+...+.+++|+|+++.|+ +++.++. |++||+++++. ..+..|...+.+++|+|+|++|+.++. ++ .|.+||
T Consensus 219 ~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d 297 (415)
T 2hqs_A 219 ASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVN 297 (415)
T ss_dssp ECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred ecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEE
Confidence 55667899999999999887 6666655 99999988765 567778888999999999999988876 44 677778
Q ss_pred CCCCCCcCceeEEEeccccccccceEEEEECCCCCEEEEeeCC---CeEEEEeCCCceeeEEecCCccCeeeEEEcCCCC
Q 019006 255 MRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSD---RMVYIWDTTSRRILYKLPGHTGSVNESVFHATEP 331 (347)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~d---g~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~ 331 (347)
+.... ...+..+ ...+..++|+|||++|++++.+ +.|++||+.+++.. .+..|. .+..++|+|+++
T Consensus 298 ~~~~~-----~~~l~~~----~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~-~l~~~~-~~~~~~~spdg~ 366 (415)
T 2hqs_A 298 INGGA-----PQRITWE----GSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLSSTF-LDETPSLAPNGT 366 (415)
T ss_dssp TTSSC-----CEECCCS----SSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEE-ECCCSS-SCEEEEECTTSS
T ss_pred CCCCC-----EEEEecC----CCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEE-EecCCC-CcCCeEEcCCCC
Confidence 76432 1222222 2357789999999999988764 58999999988764 566665 899999999999
Q ss_pred EEEEecCCC---cEEeecC
Q 019006 332 VIGSCSSDK---QIYLGEI 347 (347)
Q Consensus 332 ~l~s~s~D~---~i~i~~~ 347 (347)
.|++++.|+ .|++||+
T Consensus 367 ~l~~~s~~~~~~~l~~~d~ 385 (415)
T 2hqs_A 367 MVIYSSSQGMGSVLNLVST 385 (415)
T ss_dssp EEEEEEEETTEEEEEEEET
T ss_pred EEEEEEcCCCccEEEEEEC
Confidence 999999877 7999874
No 129
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.96 E-value=1.3e-26 Score=202.09 Aligned_cols=274 Identities=10% Similarity=0.174 Sum_probs=194.4
Q ss_pred eEEEeeCCCcEEEEeccCCC-eeeEEEeCcccceeEEEEcCCCCEEEEecCC-CeEEEEECC--CCc--eeeeeeccCcc
Q 019006 71 VIASGSHDRDIFLWHVHGDC-KNFMVLKGHKNAILDLHWTTDGSQIISASPD-KTLRAWDVE--TGK--QIKKMAEHNSF 144 (347)
Q Consensus 71 ~l~s~~~d~~v~~w~~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d-g~i~iwd~~--~~~--~~~~~~~~~~~ 144 (347)
++++++.|+.|++|++.... ........|...+..++|+|++++|++++.+ +.|++|++. +++ .+..+..+. .
T Consensus 7 l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~ 85 (343)
T 1ri6_A 7 VYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-S 85 (343)
T ss_dssp EEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-C
T ss_pred EEEeCCCCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-C
Confidence 44555889999999985322 1222234567788999999999998888876 999999997 444 233343333 5
Q ss_pred eeEeecCCCCCCEEEEEcCCCceEEEeCC---CCCceeecCCCCceEEEEEcCCCCeEEEEe-cCCcEEEEeCCC-CceE
Q 019006 145 VNSCCPSRRGPPLVVSGSDDGTAKLWDMR---QRGAIQTFPDKYQITAVSFSDASDKIYTGG-IDNDVKVWDLRK-GEVS 219 (347)
Q Consensus 145 v~~~~~~~~~~~~~~s~~~d~~i~iwd~~---~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~-~~~~ 219 (347)
+..+++++++..+++++..++.|.+||+. .......+.....+.+++|+|+++.+++++ .++.|++||+.+ ++..
T Consensus 86 ~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~ 165 (343)
T 1ri6_A 86 LTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLV 165 (343)
T ss_dssp CSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEE
T ss_pred CcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCcee
Confidence 66778888776566666778999999994 334455555566788999999999888877 889999999987 5443
Q ss_pred E----EecC-CCCceeEEEECCCCCEEEEE-cCCCcEEEEeCCCCCCcCceeEEEecccc--ccccceEEEEECCCCCEE
Q 019006 220 M----TLQG-HQDMITGMSLSPDGSYLLTN-GMDCKLCIWDMRPYAPQNRCVKILEGHQH--NFEKNLLKCGWSPDGSKV 291 (347)
Q Consensus 220 ~----~~~~-~~~~i~~v~~~~~~~~l~t~-~~d~~i~~wd~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~s~~g~~l 291 (347)
. .+.. ....+..++|+|++++++++ ..++.+.+||+.................. .....+..++|+|+|++|
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l 245 (343)
T 1ri6_A 166 AQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHL 245 (343)
T ss_dssp EEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEE
T ss_pred eecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEE
Confidence 2 2222 23467889999999977655 47899999999642211121222221111 112346678999999988
Q ss_pred E-EeeCCCeEEEEeCC----CceeeEEecCCccCeeeEEEcCCCCEEEEec-CCCcEEeec
Q 019006 292 T-AGSSDRMVYIWDTT----SRRILYKLPGHTGSVNESVFHATEPVIGSCS-SDKQIYLGE 346 (347)
Q Consensus 292 ~-sgs~dg~i~vwd~~----~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s-~D~~i~i~~ 346 (347)
+ ++..++.|++||+. ..+.+..+..+.. +..++|+|++++|+.++ .|+.|.+|+
T Consensus 246 ~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~v~v~~ 305 (343)
T 1ri6_A 246 YACDRTASLITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQKSHHISVYE 305 (343)
T ss_dssp EEEETTTTEEEEEEECTTSCCEEEEEEEECSSS-CCCEEECTTSSEEEEECTTTCEEEEEE
T ss_pred EEEecCCCEEEEEEEcCCCCceEEeeeecCCCc-cceEEECCCCCEEEEecCCCCeEEEEE
Confidence 7 45579999999998 3345556665554 89999999999777777 689999995
No 130
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.96 E-value=9.9e-27 Score=215.21 Aligned_cols=274 Identities=10% Similarity=0.081 Sum_probs=209.5
Q ss_pred EECCCCCeEEEeeCCCcEEEEeccCCCeeeEEEe-CcccceeEEEEcCCCCEEEEecCCCeEEEEEC--CCCceeeeeec
Q 019006 64 KFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLK-GHKNAILDLHWTTDGSQIISASPDKTLRAWDV--ETGKQIKKMAE 140 (347)
Q Consensus 64 ~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~--~~~~~~~~~~~ 140 (347)
.|+|++.++++++.|++|.+||... .+....+. ++. +..++|+|+|++|++++.|+.|++||+ .+++.+..+..
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t-~~~~~~i~~g~~--~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~ 220 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDS-KKIVKVIDTGYA--VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKI 220 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTT-CCEEEEEECSTT--EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEEC
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCC-ceEEEEEecCcc--cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEec
Confidence 3789999999999999999999854 34445565 443 889999999999999999999999999 78887777763
Q ss_pred cCcceeEeecCC----CCCCEEEEEcCCCceEEEeCCCCCceeecCC------------CCceEEEEEcCCCCeE-EEEe
Q 019006 141 HNSFVNSCCPSR----RGPPLVVSGSDDGTAKLWDMRQRGAIQTFPD------------KYQITAVSFSDASDKI-YTGG 203 (347)
Q Consensus 141 ~~~~v~~~~~~~----~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~~------------~~~v~~~~~~~~~~~l-~~~~ 203 (347)
......+++++ ++..++++...+++|.+||..+.+++..++. ...+..+.++++++.+ ++..
T Consensus 221 -g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~ 299 (543)
T 1nir_A 221 -GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVK 299 (543)
T ss_dssp -CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEET
T ss_pred -CCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEEC
Confidence 44567788887 6654444444689999999998887776643 2268899999987655 5667
Q ss_pred cCCcEEEEeCCCCceEE--EecCCCCceeEEEECCCCCEEEEE-cCCCcEEEEeCCCCCCcCceeEEEeccccccccceE
Q 019006 204 IDNDVKVWDLRKGEVSM--TLQGHQDMITGMSLSPDGSYLLTN-GMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLL 280 (347)
Q Consensus 204 ~dg~i~iwd~~~~~~~~--~~~~~~~~i~~v~~~~~~~~l~t~-~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (347)
.++.|.+||+.+.+... .+. +...+.++.|+|++++++++ ..+++|.+||... .++...+......+.....
T Consensus 300 ~~g~i~vvd~~~~~~l~~~~i~-~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~t----g~l~~~i~~g~~ph~g~g~ 374 (543)
T 1nir_A 300 ETGKVLLVNYKDIDNLTVTSIG-AAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKD----RRLSALVDVGKTPHPGRGA 374 (543)
T ss_dssp TTTEEEEEECTTSSSCEEEEEE-CCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTT----TEEEEEEECSSSBCCTTCE
T ss_pred CCCeEEEEEecCCCcceeEEec-cCcCccCceECCCCCEEEEEecCCCeEEEEECCC----CeEEEeeccCCCCCCCCCc
Confidence 88999999998765333 333 45668899999999987755 4588999999874 3455555432111122222
Q ss_pred EEEECCC-CCEEEEee-CCCeEEEEeCCC-------ceeeEEecCCccCeeeEEEcCCCCEEEEec-------CCCcEEe
Q 019006 281 KCGWSPD-GSKVTAGS-SDRMVYIWDTTS-------RRILYKLPGHTGSVNESVFHATEPVIGSCS-------SDKQIYL 344 (347)
Q Consensus 281 ~~~~s~~-g~~l~sgs-~dg~i~vwd~~~-------~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s-------~D~~i~i 344 (347)
.. ++|+ |..++++. .|++|.+||..+ .++++++++|.+.+..++|||++++|.+++ .+++|.+
T Consensus 375 ~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v 453 (543)
T 1nir_A 375 NF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAV 453 (543)
T ss_dssp EE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEE
T ss_pred cc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEE
Confidence 22 4677 66677775 689999999998 889999999999999999999999999987 3789999
Q ss_pred ecC
Q 019006 345 GEI 347 (347)
Q Consensus 345 ~~~ 347 (347)
||+
T Consensus 454 ~d~ 456 (543)
T 1nir_A 454 FDL 456 (543)
T ss_dssp EET
T ss_pred EEC
Confidence 985
No 131
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.96 E-value=5.2e-28 Score=215.74 Aligned_cols=203 Identities=12% Similarity=0.111 Sum_probs=150.2
Q ss_pred EecCccccEEEEEECC--------CCCeEEEeeCCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCC-EEEEecCCC
Q 019006 52 LLTGHQSAVYTMKFNP--------AGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGS-QIISASPDK 122 (347)
Q Consensus 52 ~~~~h~~~V~~v~~~~--------~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~~~dg 122 (347)
.+.||.+.|++|+|+| ++++||||+.|++|++||+... .....+.+|...|.+++|+|++. +|++++.||
T Consensus 131 ~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~-~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~ 209 (393)
T 4gq1_A 131 GKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDE-GPILAGYPLSSPGISVQFRPSNPNQLIVGERNG 209 (393)
T ss_dssp TTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETT-EEEEEEEECSSCEEEEEEETTEEEEEEEEETTS
T ss_pred ccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCC-ceeeeecCCCCCcEEEEECCCCCceEEecCCCC
Confidence 4689999999999997 7899999999999999999643 44556778889999999999874 799999999
Q ss_pred eEEEEECCCCceeeee-------------------------eccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCc
Q 019006 123 TLRAWDVETGKQIKKM-------------------------AEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGA 177 (347)
Q Consensus 123 ~i~iwd~~~~~~~~~~-------------------------~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~ 177 (347)
+|++||+.+++..... ..|...+..+.+...+...+++++.|+++++||+..+..
T Consensus 210 ~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~ 289 (393)
T 4gq1_A 210 NIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANND 289 (393)
T ss_dssp EEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-----
T ss_pred EEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCC
Confidence 9999999877543222 124445556666655667899999999999999976554
Q ss_pred eeecCC-------------------CCceEEEEEcC-CCC-eEEEEecCCcEEEEeCCCCceEEEecCCCCceeEEEECC
Q 019006 178 IQTFPD-------------------KYQITAVSFSD-ASD-KIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSP 236 (347)
Q Consensus 178 ~~~~~~-------------------~~~v~~~~~~~-~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~ 236 (347)
...+.. ........+++ .++ ++++|+.||.|++||+.+++....+..|...|.+++|+|
T Consensus 290 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafsp 369 (393)
T 4gq1_A 290 YNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQ 369 (393)
T ss_dssp --------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECT
T ss_pred CceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcC
Confidence 333211 01111223333 233 566788999999999999988888888889999999999
Q ss_pred CCCEEEEEcCCCcEEEEeCC
Q 019006 237 DGSYLLTNGMDCKLCIWDMR 256 (347)
Q Consensus 237 ~~~~l~t~~~d~~i~~wd~~ 256 (347)
+|++||+++.+| +.+|.+.
T Consensus 370 dG~~LA~as~~G-v~lvrL~ 388 (393)
T 4gq1_A 370 DGSHLAIATEGS-VLLTRLM 388 (393)
T ss_dssp TSSEEEEEESSE-EEEEEEG
T ss_pred CCCEEEEEeCCC-eEEEEEe
Confidence 999999998765 6666653
No 132
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.95 E-value=2.1e-26 Score=221.59 Aligned_cols=281 Identities=12% Similarity=0.138 Sum_probs=206.7
Q ss_pred cccEEEEEECCCCCeEEEeeC-CC-----cEEEEeccCCCeeeEEEeCcc------------------------cceeEE
Q 019006 57 QSAVYTMKFNPAGTVIASGSH-DR-----DIFLWHVHGDCKNFMVLKGHK------------------------NAILDL 106 (347)
Q Consensus 57 ~~~V~~v~~~~~~~~l~s~~~-d~-----~v~~w~~~~~~~~~~~~~~h~------------------------~~v~~~ 106 (347)
...|.+++|+|+|+.|++++. |+ .|++|++.+. .....+..+. ..|.++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 114 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSG-QTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDY 114 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTC-CEEEEECGGGTC--------------------CCEESCCC
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCC-ceeEccchhhcccccccccchhhhhhhhhhhccccCccee
Confidence 457999999999999999998 88 8999998643 2333343332 237899
Q ss_pred EEcCCCCEEEEecCCCeEEEEECCCCc--eeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeecCCC
Q 019006 107 HWTTDGSQIISASPDKTLRAWDVETGK--QIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDK 184 (347)
Q Consensus 107 ~~~~~~~~l~s~~~dg~i~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~~~ 184 (347)
+|+|||++|++++. +.|++||+.++. ....+..+...+..+.+++++. .++.++ ++.|++||+.++.........
T Consensus 115 ~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~-~la~~~-~~~i~~~d~~~g~~~~~~~~~ 191 (741)
T 2ecf_A 115 QWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGG-FVSFIR-GRNLWVIDLASGRQMQLTADG 191 (741)
T ss_dssp EECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSS-EEEEEE-TTEEEEEETTTTEEEECCCCC
T ss_pred EECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCC-EEEEEe-CCcEEEEecCCCCEEEeccCC
Confidence 99999999998886 999999998873 4455666777788888988875 555555 468999999877655443322
Q ss_pred Cc-----------------eEEEEEcCCCCeEEEEecCC---------------------------------cEEEEeCC
Q 019006 185 YQ-----------------ITAVSFSDASDKIYTGGIDN---------------------------------DVKVWDLR 214 (347)
Q Consensus 185 ~~-----------------v~~~~~~~~~~~l~~~~~dg---------------------------------~i~iwd~~ 214 (347)
.. +..+.|+|+++.|++++.|+ .|++||+.
T Consensus 192 ~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~ 271 (741)
T 2ecf_A 192 STTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPA 271 (741)
T ss_dssp CSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSS
T ss_pred ccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECC
Confidence 21 47799999999999887765 78999998
Q ss_pred C-CceEEEec--CCCCceeEEEECCCCCEEEEEcC-----CCcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECC
Q 019006 215 K-GEVSMTLQ--GHQDMITGMSLSPDGSYLLTNGM-----DCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSP 286 (347)
Q Consensus 215 ~-~~~~~~~~--~~~~~i~~v~~~~~~~~l~t~~~-----d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 286 (347)
+ ++...... .|...+..++| |+|++|+.++. +..|.+||+... .+...+..+.......+..++|+|
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g----~~~~~~~~~~~~~~~~~~~~~~sp 346 (741)
T 2ecf_A 272 EQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASN----QQRVLAHETSPTWVPLHNSLRFLD 346 (741)
T ss_dssp TTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTC----CEEEEEEEECSSCCCCCSCCEECT
T ss_pred CCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCC----ceEEEEEcCCCCcCCcCCceEECC
Confidence 8 76544332 36678999999 99999987653 568999998753 233333332211111334678999
Q ss_pred CCCEEEEeeCCCeEEEEeCC-CceeeEEecCCccCeeeE-EEcCCCCEEE-EecCCC--cEEeecC
Q 019006 287 DGSKVTAGSSDRMVYIWDTT-SRRILYKLPGHTGSVNES-VFHATEPVIG-SCSSDK--QIYLGEI 347 (347)
Q Consensus 287 ~g~~l~sgs~dg~i~vwd~~-~~~~~~~~~~h~~~v~~~-~~~~~~~~l~-s~s~D~--~i~i~~~ 347 (347)
||+++++++.||.++||.+. .+. ...+..|...+..+ .|+|+++.|+ +++.|+ .++||++
T Consensus 347 dg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~ 411 (741)
T 2ecf_A 347 DGSILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAV 411 (741)
T ss_dssp TSCEEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEE
T ss_pred CCeEEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEE
Confidence 99999999999977777654 344 77888888888887 5999998775 455555 8888863
No 133
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.95 E-value=1.5e-24 Score=188.51 Aligned_cols=274 Identities=14% Similarity=0.136 Sum_probs=193.0
Q ss_pred ECCCC-CeEEEeeCCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEecC-CCeEEEEECCCCce-eeeeecc
Q 019006 65 FNPAG-TVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASP-DKTLRAWDVETGKQ-IKKMAEH 141 (347)
Q Consensus 65 ~~~~~-~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~-dg~i~iwd~~~~~~-~~~~~~~ 141 (347)
|.+++ ..+++++.++.|++||.... +....+..+...+ .++|+|+++++++++. ++.|.+||..+++. ...+..+
T Consensus 5 ~~~~~~~~~v~~~~~~~v~~~d~~~~-~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~ 82 (331)
T 3u4y_A 5 FQTTSNFGIVVEQHLRRISFFSTDTL-EILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEG 82 (331)
T ss_dssp --CCCCEEEEEEGGGTEEEEEETTTC-CEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEEC
T ss_pred EcCCCCEEEEEecCCCeEEEEeCccc-ceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccC
Confidence 45544 45778889999999998643 3334445555566 9999999997766655 89999999999887 6666555
Q ss_pred CcceeEeecCCCCCCEEEEEcCC-C--ceEEEeCCCCCceeecCCCCceEEEEEcCCCCeEEEE-ecCCc-EEEEeCCCC
Q 019006 142 NSFVNSCCPSRRGPPLVVSGSDD-G--TAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIYTG-GIDND-VKVWDLRKG 216 (347)
Q Consensus 142 ~~~v~~~~~~~~~~~~~~s~~~d-~--~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~-i~iwd~~~~ 216 (347)
......+++++++. +++++..+ + .|.+||+.+++.+..++.......++|+|++++++++ ..++. |.+|++...
T Consensus 83 ~~~~~~~~~s~dg~-~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~ 161 (331)
T 3u4y_A 83 QSSMADVDITPDDQ-FAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDAD 161 (331)
T ss_dssp SSCCCCEEECTTSS-EEEECCCSSSSCEEEEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTT
T ss_pred CCCccceEECCCCC-EEEEecCCCCcccEEEEECCCCCeEEEEECCCCccceEECCCCCEEEEEecCCCceEEEEEECCC
Confidence 55544367777765 45555444 3 8999999988888877777778999999999876655 45588 999998754
Q ss_pred ceE----EEecCCCCceeEEEECCCCCEEEE-EcCCCcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEE
Q 019006 217 EVS----MTLQGHQDMITGMSLSPDGSYLLT-NGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKV 291 (347)
Q Consensus 217 ~~~----~~~~~~~~~i~~v~~~~~~~~l~t-~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l 291 (347)
... ............++|+|++++++. +..++.|.+||+...+. ...+..+... ..+..++|+|||++|
T Consensus 162 g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~-~~~~~~~~~~-----~~~~~~~~spdg~~l 235 (331)
T 3u4y_A 162 GVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPEN-ITLLNAVGTN-----NLPGTIVVSRDGSTV 235 (331)
T ss_dssp CCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTS-CEEEEEEECS-----SCCCCEEECTTSSEE
T ss_pred CcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcc-cceeeeccCC-----CCCceEEECCCCCEE
Confidence 322 111123345789999999996655 45688999999875432 1113333322 345678899999977
Q ss_pred EEee-CCCeEEEEeCCCcee--eEEecCC----ccC---eeeEEEcCCCCEEEEe-cCCCcEEeecC
Q 019006 292 TAGS-SDRMVYIWDTTSRRI--LYKLPGH----TGS---VNESVFHATEPVIGSC-SSDKQIYLGEI 347 (347)
Q Consensus 292 ~sgs-~dg~i~vwd~~~~~~--~~~~~~h----~~~---v~~~~~~~~~~~l~s~-s~D~~i~i~~~ 347 (347)
+++. .++.|.+||..++++ +..+..+ ... ...++|+|+++.|+.+ ..++.|.+||+
T Consensus 236 ~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~ 302 (331)
T 3u4y_A 236 YVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTI 302 (331)
T ss_dssp EEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEET
T ss_pred EEEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEe
Confidence 6554 578899999999877 4444332 222 3558999999977554 55679999985
No 134
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.95 E-value=4.7e-25 Score=187.80 Aligned_cols=255 Identities=17% Similarity=0.198 Sum_probs=189.2
Q ss_pred EeeCCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEECCC-Cceeeeeecc-CcceeEeecC
Q 019006 74 SGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVET-GKQIKKMAEH-NSFVNSCCPS 151 (347)
Q Consensus 74 s~~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~-~~~v~~~~~~ 151 (347)
+++.|+.|++|++.+. ....+..|...|.+++|+|++++|++++ ++.|++||+.+ ++.......+ ...+..+.++
T Consensus 17 ~~~~~~~i~~~d~~~~--~~~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s 93 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTR--KMRVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGIS 93 (297)
T ss_dssp -CCCCEEEEEEETTTT--EEEEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEEC
T ss_pred CCCcceeEEEEeCCCC--ceeeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEEC
Confidence 4678899999998643 2335667888999999999999999886 78999999998 7665554444 3556677788
Q ss_pred CCCCCEEEEEc--CCCceEEEeC--CCCCceeecCCCCceEEEEEcCCCCeEE-EEecCCcEEEEeCCC-CceEEEecCC
Q 019006 152 RRGPPLVVSGS--DDGTAKLWDM--RQRGAIQTFPDKYQITAVSFSDASDKIY-TGGIDNDVKVWDLRK-GEVSMTLQGH 225 (347)
Q Consensus 152 ~~~~~~~~s~~--~d~~i~iwd~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~iwd~~~-~~~~~~~~~~ 225 (347)
+++. ++++++ .++...+|.+ ..+. ...+.....+..+.|+|+++.++ +++.++.+++|+++. +.....+..+
T Consensus 94 pdg~-~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 171 (297)
T 2ojh_A 94 PDGA-LYAISDKVEFGKSAIYLLPSTGGT-PRLMTKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHG 171 (297)
T ss_dssp TTSS-EEEEEECTTTSSCEEEEEETTCCC-CEECCSSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCS
T ss_pred CCCC-EEEEEEeCCCCcceEEEEECCCCc-eEEeecCCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccC
Confidence 7765 566666 3345666554 4443 34444444588899999999877 778899999998532 2334566667
Q ss_pred CCceeEEEECCCCCEEEEEc-CCCcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEEEEeeCC-------
Q 019006 226 QDMITGMSLSPDGSYLLTNG-MDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSD------- 297 (347)
Q Consensus 226 ~~~i~~v~~~~~~~~l~t~~-~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~d------- 297 (347)
...+.+++|+|++++++.++ .++.+.+|++.... .....+..+ ...+..++|+|+|++|++++.+
T Consensus 172 ~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~---~~~~~~~~~----~~~~~~~~~s~dg~~l~~~~~~~~~~~~~ 244 (297)
T 2ojh_A 172 EGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDG---SSVERITDS----AYGDWFPHPSPSGDKVVFVSYDADVFDHP 244 (297)
T ss_dssp SSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTS---SCEEECCCC----SEEEEEEEECTTSSEEEEEEEETTCCSCC
T ss_pred CCccccceECCCCCEEEEEecCCCCccEEEECCCC---CCcEEEecC----CcccCCeEECCCCCEEEEEEcCCCCCccc
Confidence 78899999999999888766 58899999886321 223333333 2457789999999999988865
Q ss_pred ----CeEEEEeCCCcee--eEEecCCccCeeeEEEcCCCCEEEEecCCC
Q 019006 298 ----RMVYIWDTTSRRI--LYKLPGHTGSVNESVFHATEPVIGSCSSDK 340 (347)
Q Consensus 298 ----g~i~vwd~~~~~~--~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~ 340 (347)
+.|++||+.+++. +..+.+|...+..++|+|+++.|++++.|.
T Consensus 245 ~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 245 RDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp SSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred ccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence 5699999988765 445568889999999999999999888764
No 135
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.95 E-value=3e-24 Score=188.07 Aligned_cols=271 Identities=9% Similarity=0.101 Sum_probs=205.2
Q ss_pred ccccEEEEEECCCCCeEEEeeC-------CCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEE-EecCCCeEEEE
Q 019006 56 HQSAVYTMKFNPAGTVIASGSH-------DRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQII-SASPDKTLRAW 127 (347)
Q Consensus 56 h~~~V~~v~~~~~~~~l~s~~~-------d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-s~~~dg~i~iw 127 (347)
....+..++|+|+++.|++++. ++.|.+||..+. +....+.. ...+..++|+|++++++ +...++.|.+|
T Consensus 39 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~-~~~~~~~~-~~~~~~~~~s~dg~~l~v~~~~~~~v~~~ 116 (353)
T 3vgz_A 39 VGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTL-EVTQAIHN-DLKPFGATINNTTQTLWFGNTVNSAVTAI 116 (353)
T ss_dssp EESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTC-CEEEEEEE-SSCCCSEEEETTTTEEEEEETTTTEEEEE
T ss_pred hccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCC-eEEEEEec-CCCcceEEECCCCCEEEEEecCCCEEEEE
Confidence 4567889999999998888774 567999998643 33333332 34578899999999655 55668999999
Q ss_pred ECCCCceeeeeeccCcc---------eeEeecCCCCCCEEEEE-cCCCceEEEeCCCCCceeecC-CCCceEEEEEcCCC
Q 019006 128 DVETGKQIKKMAEHNSF---------VNSCCPSRRGPPLVVSG-SDDGTAKLWDMRQRGAIQTFP-DKYQITAVSFSDAS 196 (347)
Q Consensus 128 d~~~~~~~~~~~~~~~~---------v~~~~~~~~~~~~~~s~-~~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~ 196 (347)
|..+++.+..+..+... ...+.+++++..++++. ..++.|.+||..+++.+..++ ....+..++|+|++
T Consensus 117 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg 196 (353)
T 3vgz_A 117 DAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEG 196 (353)
T ss_dssp ETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTT
T ss_pred eCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCC
Confidence 99999887776654322 45677777776555555 458899999999888887777 45568889999999
Q ss_pred CeEEEEecCCcEEEEeCCCCceEEEecC----CCCceeEEEECCCCCEEEEEcC-CCcEEEEeCCCCCCcCceeEEEecc
Q 019006 197 DKIYTGGIDNDVKVWDLRKGEVSMTLQG----HQDMITGMSLSPDGSYLLTNGM-DCKLCIWDMRPYAPQNRCVKILEGH 271 (347)
Q Consensus 197 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~----~~~~i~~v~~~~~~~~l~t~~~-d~~i~~wd~~~~~~~~~~~~~~~~~ 271 (347)
+.+++++.++.|.+||+.+++....+.. +...+.+++|+|+++++++++. ++.|.+||.... .....+...
T Consensus 197 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~----~~~~~~~~~ 272 (353)
T 3vgz_A 197 KRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNG----NILAKVAAP 272 (353)
T ss_dssp TEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTC----CEEEEEECS
T ss_pred CEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCC----cEEEEEEcC
Confidence 9999999999999999999987776653 4556788999999998776655 489999998743 333333322
Q ss_pred ccccccceEEEEECCCCCEEEEee-CCCeEEEEeCCCceeeEEecCCccCeeeEEEcCCCCEEEEecCC
Q 019006 272 QHNFEKNLLKCGWSPDGSKVTAGS-SDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSD 339 (347)
Q Consensus 272 ~~~~~~~~~~~~~s~~g~~l~sgs-~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D 339 (347)
. ...++|+|+|++++++. .++.|.+||..+++.+..+..+ ..+..++|+|+++.|..+..+
T Consensus 273 ~------~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 273 E------SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTP-THPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp S------CCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEECC-SEEEEEEECTTSCEEEEEEEC
T ss_pred C------CceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEecC-CCCCeEEEcCCCCEEEEEEcc
Confidence 1 24578999999766555 7899999999999988887654 367999999999966555543
No 136
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.94 E-value=1.2e-23 Score=183.33 Aligned_cols=270 Identities=11% Similarity=0.099 Sum_probs=184.1
Q ss_pred CccccEEEEEECCCCCeEEEeeCC-CcEEEEecc--C-CCeeeEEEeCcccceeEEEEcCCCCEEEEec-CCCeEEEEEC
Q 019006 55 GHQSAVYTMKFNPAGTVIASGSHD-RDIFLWHVH--G-DCKNFMVLKGHKNAILDLHWTTDGSQIISAS-PDKTLRAWDV 129 (347)
Q Consensus 55 ~h~~~V~~v~~~~~~~~l~s~~~d-~~v~~w~~~--~-~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~-~dg~i~iwd~ 129 (347)
.|...+.+++|+|+|+.|++++.+ +.|.+|++. + .......+..+. .+..++|+|++++|++++ .++.|.+||+
T Consensus 35 ~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~ 113 (343)
T 1ri6_A 35 DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SLTHISTDHQGQFVFVGSYNAGNVSVTRL 113 (343)
T ss_dssp ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CCSEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred ecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CCcEEEEcCCCCEEEEEecCCCeEEEEEC
Confidence 466788899999999988888886 999999986 2 222233344443 789999999999887665 4889999999
Q ss_pred CC---CceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCC-CCcee------ecCCCCceEEEEEcCCCCeE
Q 019006 130 ET---GKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQ-RGAIQ------TFPDKYQITAVSFSDASDKI 199 (347)
Q Consensus 130 ~~---~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~-~~~~~------~~~~~~~v~~~~~~~~~~~l 199 (347)
.+ .+....+. ....+..+++++++..+++++..++.|.+||+.. +.... .......+..++|+|+++++
T Consensus 114 ~~~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l 192 (343)
T 1ri6_A 114 EDGLPVGVVDVVE-GLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYA 192 (343)
T ss_dssp ETTEEEEEEEEEC-CCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEE
T ss_pred CCCcccccccccc-CCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEE
Confidence 43 33333333 2334666778777765655555899999999987 44321 22234568889999999977
Q ss_pred EEEe-cCCcEEEEeCCC--Cce--EEEec---C-C--CCceeEEEECCCCCEEE-EEcCCCcEEEEeCCCCCCcCceeEE
Q 019006 200 YTGG-IDNDVKVWDLRK--GEV--SMTLQ---G-H--QDMITGMSLSPDGSYLL-TNGMDCKLCIWDMRPYAPQNRCVKI 267 (347)
Q Consensus 200 ~~~~-~dg~i~iwd~~~--~~~--~~~~~---~-~--~~~i~~v~~~~~~~~l~-t~~~d~~i~~wd~~~~~~~~~~~~~ 267 (347)
++++ .++.|++||+.. ++. ...+. . + ...+..++|+|++++|+ ++..++.|.+||+.........+..
T Consensus 193 ~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~ 272 (343)
T 1ri6_A 193 YCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGF 272 (343)
T ss_dssp EEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEE
T ss_pred EEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeee
Confidence 6554 789999999953 332 22221 1 1 23466899999999887 4557899999998732212223333
Q ss_pred EeccccccccceEEEEECCCCCEEEEee-CCCeEEEE--eCCCce--eeEEecCCccCeeeEEEcCCCCE
Q 019006 268 LEGHQHNFEKNLLKCGWSPDGSKVTAGS-SDRMVYIW--DTTSRR--ILYKLPGHTGSVNESVFHATEPV 332 (347)
Q Consensus 268 ~~~~~~~~~~~~~~~~~s~~g~~l~sgs-~dg~i~vw--d~~~~~--~~~~~~~h~~~v~~~~~~~~~~~ 332 (347)
+..+ ..+..++|+|+|++|++++ .++.|.+| |..+++ .+..++. ......++|.++.+.
T Consensus 273 ~~~~-----~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~-g~~p~~i~~~~~~~~ 336 (343)
T 1ri6_A 273 QPTE-----TQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAV-GQGPMWVVVNAHEGG 336 (343)
T ss_dssp EECS-----SSCCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEEEEEC-SSSCCEEEEEEEC--
T ss_pred ecCC-----CccceEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEcccccc-CCCCeeEEEEcccCC
Confidence 3322 2366789999999888877 68999999 544554 3444544 245678888887653
No 137
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.94 E-value=5.1e-25 Score=211.38 Aligned_cols=280 Identities=13% Similarity=0.095 Sum_probs=194.9
Q ss_pred cEEEEEECCCCCeEEEeeCCCcEEEEeccCCCeeeEEEeCccc---ceeEEEEcCCCCEEEEecCC---------CeEEE
Q 019006 59 AVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKN---AILDLHWTTDGSQIISASPD---------KTLRA 126 (347)
Q Consensus 59 ~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~---~v~~~~~~~~~~~l~s~~~d---------g~i~i 126 (347)
.+.+++|+|+|+++++ +.||+|++|+..+. +....+.+|.. .|.+++|+|||++|++++.+ +.+.+
T Consensus 18 ~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g-~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~ 95 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYR-EQKGTVRLWNVETN-TSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVL 95 (723)
T ss_dssp CCCCCCBSSSSCBCCC-CSSSCEEEBCGGGC-CCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEE
T ss_pred cccccEEcCCCcEEEE-eCCCCEEEEECCCC-cEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEE
Confidence 4678899999998876 78999999999643 33345566654 49999999999999998764 78889
Q ss_pred EECCCCceeeeee---ccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeecCC-CC-----------------
Q 019006 127 WDVETGKQIKKMA---EHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPD-KY----------------- 185 (347)
Q Consensus 127 wd~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~~-~~----------------- 185 (347)
||+.+++. ..+. .+...+....+++++..+ +.++. +.|++||+.++........ ..
T Consensus 96 ~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~l-a~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~ 172 (723)
T 1xfd_A 96 SKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQL-IFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEIL 172 (723)
T ss_dssp EESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCE-EEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTS
T ss_pred EECCCCce-EeccCCccccccccccEECCCCCEE-EEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEec
Confidence 99998765 2332 233346677888887654 44544 7899999988766554432 12
Q ss_pred -ceEEEEEcCCCCeEEEEecCC----------------------------------cEEEEeCCCCceEEEecCC-----
Q 019006 186 -QITAVSFSDASDKIYTGGIDN----------------------------------DVKVWDLRKGEVSMTLQGH----- 225 (347)
Q Consensus 186 -~v~~~~~~~~~~~l~~~~~dg----------------------------------~i~iwd~~~~~~~~~~~~~----- 225 (347)
.+..+.|+|+++.|+.++.++ .|++||+.+++....+..+
T Consensus 173 ~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~ 252 (723)
T 1xfd_A 173 KTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRM 252 (723)
T ss_dssp SSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGG
T ss_pred cCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCC
Confidence 237899999999999887543 7999999888755555544
Q ss_pred -CCceeEEEECCCCCEEEEEcC----CCcEEEEeCCCCCCcCceeEEEeccccccccc-eEEEEECCCCCEEEE--eeCC
Q 019006 226 -QDMITGMSLSPDGSYLLTNGM----DCKLCIWDMRPYAPQNRCVKILEGHQHNFEKN-LLKCGWSPDGSKVTA--GSSD 297 (347)
Q Consensus 226 -~~~i~~v~~~~~~~~l~t~~~----d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~g~~l~s--gs~d 297 (347)
...+..++|+|||+++++... +..|.+||+... .+...+..+....... ...++|+|||+.|+. +..+
T Consensus 253 ~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g----~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~ 328 (723)
T 1xfd_A 253 REYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTG----VCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQ 328 (723)
T ss_dssp SSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTC----CEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECC
T ss_pred ccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCC----cceEEEEeccCCEEeccCCCceEcCCCCeEEEEEeccc
Confidence 557889999999998876642 357999998743 2333332221111000 126789999997775 4566
Q ss_pred C------eEEEEe-CCCce--eeEEecCCccCeee-EEEcCCCCEEEEecCC---CcEEeecC
Q 019006 298 R------MVYIWD-TTSRR--ILYKLPGHTGSVNE-SVFHATEPVIGSCSSD---KQIYLGEI 347 (347)
Q Consensus 298 g------~i~vwd-~~~~~--~~~~~~~h~~~v~~-~~~~~~~~~l~s~s~D---~~i~i~~~ 347 (347)
+ .|++|| ...++ ....+..+...+.. ++|+|+++.|+..+.+ +.++||++
T Consensus 329 ~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~ 391 (723)
T 1xfd_A 329 GGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSA 391 (723)
T ss_dssp SSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEE
T ss_pred CCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEE
Confidence 7 577888 34444 14455544444554 6999999998866655 77888863
No 138
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.94 E-value=2.6e-24 Score=214.27 Aligned_cols=279 Identities=13% Similarity=0.103 Sum_probs=216.3
Q ss_pred eEecCccccEEEEEECCCCCeEEEeeCCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEECC
Q 019006 51 MLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVE 130 (347)
Q Consensus 51 ~~~~~h~~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~ 130 (347)
..+.+|...+.++.|+++ .++++++.|+.+.+|.+.........+..|. .+...+|+|+|++|+.+ .++.|.+||+.
T Consensus 197 ~~l~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~-~~~~~~~SpDG~~la~~-~~~~i~~~d~~ 273 (1045)
T 1k32_A 197 KKIVDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDLRKHTSFT-DYYPRHLNTDGRRILFS-KGGSIYIFNPD 273 (1045)
T ss_dssp EEEECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSCEECCCCC-SSCEEEEEESSSCEEEE-ETTEEEEECTT
T ss_pred EECcCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCcceEecCCC-CcceeeEcCCCCEEEEE-eCCEEEEecCC
Confidence 345789999999999988 7778888899999998753333344555555 46677999999999887 58999999985
Q ss_pred CCceeeeeec-----------cCcceeEeecC-CCCCCEEEEEcCCCceEEEeCCCCCceeecCCCC-ceEEEEEcCCCC
Q 019006 131 TGKQIKKMAE-----------HNSFVNSCCPS-RRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKY-QITAVSFSDASD 197 (347)
Q Consensus 131 ~~~~~~~~~~-----------~~~~v~~~~~~-~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~~~~-~v~~~~~~~~~~ 197 (347)
..+ +..+.. +...+..+.++ +++..++ +++ ++.+.+|++..+.......+.. .+..+.|+ +++
T Consensus 274 ~~~-l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la-~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~s-dg~ 349 (1045)
T 1k32_A 274 TEK-IEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIA-FVS-RGQAFIQDVSGTYVLKVPEPLRIRYVRRGGD-TKV 349 (1045)
T ss_dssp TCC-EEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEE-EEE-TTEEEEECTTSSBEEECSCCSCEEEEEECSS-SEE
T ss_pred ceE-eeeeccCcccccccccccccccceeeecCCCCCEEE-EEE-cCEEEEEcCCCCceEEccCCCcceEEeeeEc-CCC
Confidence 433 334433 23357778888 7776544 444 7899999998776554444445 78899999 999
Q ss_pred eEEEEecCCcEE-EEeCCCCceEEEecCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEeccccccc
Q 019006 198 KIYTGGIDNDVK-VWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFE 276 (347)
Q Consensus 198 ~l~~~~~dg~i~-iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~ 276 (347)
.++.++.++.+. +||+..++.. .+.+|...+..++|+|+|++|++++.++.|++||+... ........+ .
T Consensus 350 ~l~~~s~~~~l~~~~d~~~~~~~-~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg----~~~~~~~~~----~ 420 (1045)
T 1k32_A 350 AFIHGTREGDFLGIYDYRTGKAE-KFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETG----KPTVIERSR----E 420 (1045)
T ss_dssp EEEEEETTEEEEEEEETTTCCEE-ECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTC----CEEEEEECS----S
T ss_pred eEEEEECCCceEEEEECCCCCce-EecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCC----ceEEeccCC----C
Confidence 999888888888 9998876644 34477788999999999999999999999999999743 333334343 2
Q ss_pred cceEEEEECCCCCEEEEeeCCC----------eEEEEeCCCceeeEEecCCccCeeeEEEcCCCCEEEEecCCCcEEeec
Q 019006 277 KNLLKCGWSPDGSKVTAGSSDR----------MVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGE 346 (347)
Q Consensus 277 ~~~~~~~~s~~g~~l~sgs~dg----------~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~i~~ 346 (347)
..+..++|+|||++|++++.++ .|++||+.+++ +..+..|...+..++|+|+++.|++++.++...+|+
T Consensus 421 ~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~ 499 (1045)
T 1k32_A 421 AMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPD 499 (1045)
T ss_dssp SCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEEC
T ss_pred CCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcc
Confidence 4567889999999999887654 89999999887 667888988899999999999999999887776665
No 139
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.93 E-value=1.6e-23 Score=181.97 Aligned_cols=263 Identities=11% Similarity=0.077 Sum_probs=194.4
Q ss_pred CeEEEeeCCCcEEEEeccCCCeeeEEEe-Cccc-ceeEEEEcCCCCEE-EEecCCCeEEEEECCCCceeeeeeccC----
Q 019006 70 TVIASGSHDRDIFLWHVHGDCKNFMVLK-GHKN-AILDLHWTTDGSQI-ISASPDKTLRAWDVETGKQIKKMAEHN---- 142 (347)
Q Consensus 70 ~~l~s~~~d~~v~~w~~~~~~~~~~~~~-~h~~-~v~~~~~~~~~~~l-~s~~~dg~i~iwd~~~~~~~~~~~~~~---- 142 (347)
++|++++.++.|++||.... +....+. ++.. .+..++|+|+++++ ++++.++.|.+||+.+++.+..+....
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~-~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~ 80 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKM-AVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEER 80 (337)
T ss_dssp EEEEEEETTTEEEEEETTTT-EEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEE
T ss_pred cEEEEcCCCCeEEEEECCCC-cEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccc
Confidence 47899999999999998643 3333443 2222 47889999999866 556678999999999988776654321
Q ss_pred -cceeEeecCCCCCCEEEEEc------------CCCceEEEeCCCCCceeecCCCCceEEEEEcCCCCeEEEEecCCcEE
Q 019006 143 -SFVNSCCPSRRGPPLVVSGS------------DDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVK 209 (347)
Q Consensus 143 -~~v~~~~~~~~~~~~~~s~~------------~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~ 209 (347)
..+..+.+++++. .++++. .++.|.+||+.+++.+..+.....+..++|+|++++++++ ++.|+
T Consensus 81 ~~~~~~~~~s~dg~-~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~i~ 157 (337)
T 1pby_B 81 VKSLFGAALSPDGK-TLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGL--GRDLH 157 (337)
T ss_dssp EECTTCEEECTTSS-EEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEE--SSSEE
T ss_pred cccccceEECCCCC-EEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCCcceeEECCCCCEEEEe--CCeEE
Confidence 1345567777665 445453 5799999999888777776666677889999999988887 68899
Q ss_pred EEeCCCCceEEEecCCCCceeEEEECCCCCEEEEEcCCC------------------------cEEEEeCCCCCCcCcee
Q 019006 210 VWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDC------------------------KLCIWDMRPYAPQNRCV 265 (347)
Q Consensus 210 iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~~d~------------------------~i~~wd~~~~~~~~~~~ 265 (347)
+||+.+++....+..+.. ...+.|+|++++++..+.++ .|.+||+...+.. .
T Consensus 158 ~~d~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~---~ 233 (337)
T 1pby_B 158 VMDPEAGTLVEDKPIQSW-EAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMA---M 233 (337)
T ss_dssp EEETTTTEEEEEECSTTT-TTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE---E
T ss_pred EEECCCCcEeeeeecccc-CCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCce---E
Confidence 999999987777664431 12347899988776554332 3688998753221 1
Q ss_pred EEEeccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCCceeeEEecCCccCeeeEEEcCCCCEEEEecCCCcEEee
Q 019006 266 KILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLG 345 (347)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~i~ 345 (347)
..+..+ ...+..++|+|||++|+++ ++.|++||+.+++.+..+..+ ..+..++|+|+++.|++++.|+.|++|
T Consensus 234 ~~~~~~----~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~i~v~ 306 (337)
T 1pby_B 234 REVRIM----DVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLP-HSYYSVNVSTDGSTVWLGGALGDLAAY 306 (337)
T ss_dssp EEEEEC----SSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECS-SCCCEEEECTTSCEEEEESBSSEEEEE
T ss_pred eecCCC----CCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecCC-CceeeEEECCCCCEEEEEcCCCcEEEE
Confidence 112111 2356789999999999988 789999999999888777643 467899999999999988999999999
Q ss_pred cC
Q 019006 346 EI 347 (347)
Q Consensus 346 ~~ 347 (347)
|+
T Consensus 307 d~ 308 (337)
T 1pby_B 307 DA 308 (337)
T ss_dssp ET
T ss_pred EC
Confidence 85
No 140
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.93 E-value=1e-24 Score=204.26 Aligned_cols=272 Identities=15% Similarity=0.151 Sum_probs=193.6
Q ss_pred ccccEEEEEECCCCCeEEEeeC-CCcEEEEeccCCCeeeEEEeCcc-cceeEEEEcCCCCEEEEecC---CCeEEEEECC
Q 019006 56 HQSAVYTMKFNPAGTVIASGSH-DRDIFLWHVHGDCKNFMVLKGHK-NAILDLHWTTDGSQIISASP---DKTLRAWDVE 130 (347)
Q Consensus 56 h~~~V~~v~~~~~~~~l~s~~~-d~~v~~w~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~l~s~~~---dg~i~iwd~~ 130 (347)
+..+|++++|+|||+.||+++. ||++.||++.+. ....+..|. ..+..++|+|| +.+++++. +...++|.+.
T Consensus 20 ~~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g--~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~ 96 (582)
T 3o4h_A 20 IAVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGG--ETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVN 96 (582)
T ss_dssp HHSCEEEEEEEETTTEEEEEEEETTEEEEEEEETT--EEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEE
T ss_pred hccchheeecCCCCCeEEEEEccCCceeEEEEcCC--CcEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEe
Confidence 3567999999999999999887 999999998543 334455555 68999999999 77777765 4556666543
Q ss_pred C---CceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeecCCCCceEEEEEcCCCCeEEEEecC--
Q 019006 131 T---GKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIYTGGID-- 205 (347)
Q Consensus 131 ~---~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-- 205 (347)
. +... .+..... .....+++++..++++...++.+.+||+.+++......... .++.|+|+|+.+++++.+
T Consensus 97 ~~~~g~~~-~l~~~~~-~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~--~~~~~spDG~~la~~~~~~~ 172 (582)
T 3o4h_A 97 TSRPGEEQ-RLEAVKP-MRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG--FGFVSDIRGDLIAGLGFFGG 172 (582)
T ss_dssp TTSTTCCE-ECTTSCS-BEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS--CEEEEEEETTEEEEEEEEET
T ss_pred ccCCCccc-cccCCCC-ceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC--ceEEECCCCCEEEEEEEcCC
Confidence 2 2222 3322222 22335555555555555555566699998776544433332 788999999999988776
Q ss_pred --CcEEEEeCCCCceEEEecCCCCceeEEEECCCCCEEEEEcCCC--cEEEEeCCCCCCcCceeEEEecccccccc----
Q 019006 206 --NDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDC--KLCIWDMRPYAPQNRCVKILEGHQHNFEK---- 277 (347)
Q Consensus 206 --g~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~~d~--~i~~wd~~~~~~~~~~~~~~~~~~~~~~~---- 277 (347)
+.|++||+.+++.. .+..|...+..++|+|||++|+++..++ .|++||+.... .. .+..+......
T Consensus 173 ~~~~i~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~----~~-~~~~~~~~~~~~~~~ 246 (582)
T 3o4h_A 173 GRVSLFTSNLSSGGLR-VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGS----VE-DLELPSKDFSSYRPT 246 (582)
T ss_dssp TEEEEEEEETTTCCCE-EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCC----EE-ECCCSCSHHHHHCCS
T ss_pred CCeEEEEEcCCCCCce-EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCc----EE-EccCCCcChhhhhhc
Confidence 77999999887754 6677888899999999999999888888 89999987432 22 33333221111
Q ss_pred ceEEEEECCCCCEEEEeeCCCeEEEEeCCCceeeEEecCCccCeeeEEEcCCCCEEEEecCCCc---EEeec
Q 019006 278 NLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQ---IYLGE 346 (347)
Q Consensus 278 ~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~---i~i~~ 346 (347)
......|+|||.++++++.||.+++|++ ++.+. .+.+.+..++|+ +++++++++.+.+ +++++
T Consensus 247 ~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~~---~~~~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d 312 (582)
T 3o4h_A 247 AITWLGYLPDGRLAVVARREGRSAVFID--GERVE---APQGNHGRVVLW-RGKLVTSHTSLSTPPRIVSLP 312 (582)
T ss_dssp EEEEEEECTTSCEEEEEEETTEEEEEET--TEEEC---CCSSEEEEEEEE-TTEEEEEEEETTEEEEEEEET
T ss_pred cccceeEcCCCcEEEEEEcCCcEEEEEE--CCeec---cCCCceEEEEec-CCEEEEEEcCCCCCCeEEEEc
Confidence 1122339999999999999999999999 65543 345678899999 9999998888744 66665
No 141
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.93 E-value=2e-23 Score=208.00 Aligned_cols=291 Identities=11% Similarity=0.073 Sum_probs=208.1
Q ss_pred eeEecCccccEEEEEECCCCCeEEEeeCC------CcEEEEeccCCCeeeEEEeCcccce-------eEEEEcCCCCEEE
Q 019006 50 IMLLTGHQSAVYTMKFNPAGTVIASGSHD------RDIFLWHVHGDCKNFMVLKGHKNAI-------LDLHWTTDGSQII 116 (347)
Q Consensus 50 ~~~~~~h~~~V~~v~~~~~~~~l~s~~~d------~~v~~w~~~~~~~~~~~~~~h~~~v-------~~~~~~~~~~~l~ 116 (347)
...+.+|...+.+++|||||+.||.++.+ ..|++|++.+. ....+..|...+ ..++|+|||+.++
T Consensus 45 ~~~lt~~~~~v~~~~~SPDG~~la~~s~~~~~~~~~~i~~~d~~~g--~~~~lt~~~~~~~~~~~~~~~~~~SpDg~ll~ 122 (1045)
T 1k32_A 45 TRKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENG--EIKRITYFSGKSTGRRMFTDVAGFDPDGNLII 122 (1045)
T ss_dssp EEEEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTT--EEEECCCCCEEEETTEECSEEEEECTTCCEEE
T ss_pred EEEeeeCCCcccCeEECCCCCEEEEEEeeccCCCCCeEEEEECCCC--CeEEcccCCCcccccccccccccCCCCCEEEE
Confidence 35677899999999999999999988653 37899998643 356678888888 8999999999777
Q ss_pred EecCC------CeEEEEECCCCceeeee-------------------------------------------------ecc
Q 019006 117 SASPD------KTLRAWDVETGKQIKKM-------------------------------------------------AEH 141 (347)
Q Consensus 117 s~~~d------g~i~iwd~~~~~~~~~~-------------------------------------------------~~~ 141 (347)
+++.+ ..|.+|++.+++..... ..|
T Consensus 123 ~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~spG~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~~~~~~l~~~ 202 (1045)
T 1k32_A 123 STDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFADGRRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIVDM 202 (1045)
T ss_dssp EECTTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEEEETTEEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEEECC
T ss_pred EECCcCCCcccceEEEEECCCCCeEEecCCCcceeeeCCCEEEEeccCCCccccccccCCCcCCEEEECCCCCeEECcCC
Confidence 77754 35777887665432111 111
Q ss_pred CcceeEeecCCCCCCEEEEEcCCCceEEEeCCC-CCceeecCCCCceEEEEEcCCCCeEEEEecCCcEEEEeCCCCceEE
Q 019006 142 NSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQ-RGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSM 220 (347)
Q Consensus 142 ~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~ 220 (347)
...+....++++ .++++++.++++++|.+.. +.....+.....+...+|+|+++.++.+ .++.|++||+.... +.
T Consensus 203 ~~~v~~~~~s~d--~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~~~~~SpDG~~la~~-~~~~i~~~d~~~~~-l~ 278 (1045)
T 1k32_A 203 STHVSSPVIVGH--RIYFITDIDGFGQIYSTDLDGKDLRKHTSFTDYYPRHLNTDGRRILFS-KGGSIYIFNPDTEK-IE 278 (1045)
T ss_dssp SSCCEEEEEETT--EEEEEECTTSSCEEEEEETTSCSCEECCCCCSSCEEEEEESSSCEEEE-ETTEEEEECTTTCC-EE
T ss_pred CCcccceEEeCC--EEEEEEeccCceEEEEEeCCCCcceEecCCCCcceeeEcCCCCEEEEE-eCCEEEEecCCceE-ee
Confidence 222223333332 4667778889999997653 3333444443456677999999988887 58899999985443 33
Q ss_pred EecC-----------CCCceeEEEEC-CCCCEEEEEcCCCcEEEEeCCCCCCc-----Cc--------------------
Q 019006 221 TLQG-----------HQDMITGMSLS-PDGSYLLTNGMDCKLCIWDMRPYAPQ-----NR-------------------- 263 (347)
Q Consensus 221 ~~~~-----------~~~~i~~v~~~-~~~~~l~t~~~d~~i~~wd~~~~~~~-----~~-------------------- 263 (347)
.+.. |...+.+++|+ |+|++|++++ ++.+.+|++...... ..
T Consensus 279 ~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~sdg~~l~~~s~~ 357 (1045)
T 1k32_A 279 KIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLKVPEPLRIRYVRRGGDTKVAFIHGTRE 357 (1045)
T ss_dssp ECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEEECSCCSCEEEEEECSSSEEEEEEEETT
T ss_pred eeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceEEccCCCcceEEeeeEcCCCeEEEEECC
Confidence 5544 23468999999 9999998887 778888887532100 00
Q ss_pred -eeE-EEeccc------cccccceEEEEECCCCCEEEEeeCCCeEEEEeCCCceeeEEecCCccCeeeEEEcCCCCEEEE
Q 019006 264 -CVK-ILEGHQ------HNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGS 335 (347)
Q Consensus 264 -~~~-~~~~~~------~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 335 (347)
.+. .+.... ......+..++|+|||++|++++.++.|++||+.+++....+.+|.+.+..++|+|++++|++
T Consensus 358 ~~l~~~~d~~~~~~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~ 437 (1045)
T 1k32_A 358 GDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAY 437 (1045)
T ss_dssp EEEEEEEETTTCCEEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEE
T ss_pred CceEEEEECCCCCceEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEE
Confidence 000 111000 011245778999999999999999999999999999888777789999999999999999998
Q ss_pred ecCCC----------cEEeecC
Q 019006 336 CSSDK----------QIYLGEI 347 (347)
Q Consensus 336 ~s~D~----------~i~i~~~ 347 (347)
++.++ .|++||+
T Consensus 438 ~~~~~~~~~~~~~~~~i~l~d~ 459 (1045)
T 1k32_A 438 GFPLKHGETDGYVMQAIHVYDM 459 (1045)
T ss_dssp EEEECSSTTCSCCEEEEEEEET
T ss_pred EecCccccccCCCCCeEEEEEC
Confidence 88754 8999985
No 142
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.93 E-value=1.7e-23 Score=200.30 Aligned_cols=275 Identities=11% Similarity=0.176 Sum_probs=196.6
Q ss_pred ccEEEEEECCCCCeEEEeeCCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEECCC-----C
Q 019006 58 SAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVET-----G 132 (347)
Q Consensus 58 ~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~-----~ 132 (347)
..|.+++|+|+ ..++.+ .++.+++|++.+. ....+..+...+.+++|+|||++|+++ .|+.|++||+.+ +
T Consensus 82 ~~v~~~~~spd-~~~~~~-~~~~i~~~d~~~~--~~~~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g 156 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLF-TQGGLVGFDMLAR--KVTYLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMS 156 (706)
T ss_dssp CCCEEEEETTT-TEEEEE-ETTEEEEEETTTT--EEEEEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCC
T ss_pred cCceeEEECCC-CeEEEE-ECCEEEEEECCCC--ceEEccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCC
Confidence 56999999999 555544 3599999998643 334455677788999999999999985 689999999988 7
Q ss_pred ceeeeeeccCcc--------------eeEeecCCCCCCEEEEEc---------------------------------CCC
Q 019006 133 KQIKKMAEHNSF--------------VNSCCPSRRGPPLVVSGS---------------------------------DDG 165 (347)
Q Consensus 133 ~~~~~~~~~~~~--------------v~~~~~~~~~~~~~~s~~---------------------------------~d~ 165 (347)
+.......+... +..+.+++++. .+++++ .+.
T Consensus 157 ~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~-~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~ 235 (706)
T 2z3z_A 157 RAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGS-CLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHV 235 (706)
T ss_dssp CCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSS-EEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEE
T ss_pred CcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCC-EEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCee
Confidence 654433322221 35677888765 455554 446
Q ss_pred ceEEEeCCCCCceeec---CCCCceEEEEEcCCCCeEEEEecCC-----cEEEEeCCCCceEEEec--CCC---CceeEE
Q 019006 166 TAKLWDMRQRGAIQTF---PDKYQITAVSFSDASDKIYTGGIDN-----DVKVWDLRKGEVSMTLQ--GHQ---DMITGM 232 (347)
Q Consensus 166 ~i~iwd~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~dg-----~i~iwd~~~~~~~~~~~--~~~---~~i~~v 232 (347)
.|++||+.++...... .+...+..++|+|+++.+++++.++ .|++||+.+++....+. .+. ..+..+
T Consensus 236 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~ 315 (706)
T 2z3z_A 236 TVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPL 315 (706)
T ss_dssp EEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCC
T ss_pred EEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCc
Confidence 7999999877654433 2345689999999999999887765 89999999883333322 122 234678
Q ss_pred EECC--CCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEeccccccccceEE-EEECCCCCEEEEee-CCC----eEEEEe
Q 019006 233 SLSP--DGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLK-CGWSPDGSKVTAGS-SDR----MVYIWD 304 (347)
Q Consensus 233 ~~~~--~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~g~~l~sgs-~dg----~i~vwd 304 (347)
+|+| +|+++++++.|+.+++|++.. .......+..+ ...+.. ++|+|+|+.|+.++ .++ .|+.||
T Consensus 316 ~~sp~~dg~~l~~~~~~g~~~l~~~~~---~~~~~~~l~~~----~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d 388 (706)
T 2z3z_A 316 TFLPGSNNQFIWQSRRDGWNHLYLYDT---TGRLIRQVTKG----EWEVTNFAGFDPKGTRLYFESTEASPLERHFYCID 388 (706)
T ss_dssp EECTTCSSEEEEEECTTSSCEEEEEET---TSCEEEECCCS----SSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEE
T ss_pred eeecCCCCEEEEEEccCCccEEEEEEC---CCCEEEecCCC----CeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEE
Confidence 9999 999999999999999998752 12333444333 223544 78999999886654 444 678888
Q ss_pred CCCceeeEEecCCccCeeeEEEcCCCCEEEEecCC----CcEEeecC
Q 019006 305 TTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSD----KQIYLGEI 347 (347)
Q Consensus 305 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D----~~i~i~~~ 347 (347)
..+++ +..+. |...+..++|+|+++.++.+..+ +.|++||+
T Consensus 389 ~~~~~-~~~l~-~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~ 433 (706)
T 2z3z_A 389 IKGGK-TKDLT-PESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNI 433 (706)
T ss_dssp TTCCC-CEESC-CSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEES
T ss_pred cCCCC-ceecc-CCCceEEEEECCCCCEEEEEecCCCCCcEEEEEEC
Confidence 87765 34444 67779999999999988876544 56999874
No 143
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.93 E-value=8.3e-23 Score=178.81 Aligned_cols=269 Identities=12% Similarity=0.152 Sum_probs=182.1
Q ss_pred CCCcEEEEeccCCCeee--EEEeCcccceeEEEEcCCCCEEEEecC---CCeEEEEECCCCc--eeeeeeccCcceeEee
Q 019006 77 HDRDIFLWHVHGDCKNF--MVLKGHKNAILDLHWTTDGSQIISASP---DKTLRAWDVETGK--QIKKMAEHNSFVNSCC 149 (347)
Q Consensus 77 ~d~~v~~w~~~~~~~~~--~~~~~h~~~v~~~~~~~~~~~l~s~~~---dg~i~iwd~~~~~--~~~~~~~~~~~v~~~~ 149 (347)
.++.|++|.++.....+ .....+...+..++|+|+|+ |++++. ++.|++|++.+++ .+..+..+...+..++
T Consensus 14 ~~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a 92 (347)
T 3hfq_A 14 TSQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVA 92 (347)
T ss_dssp SCCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEE
T ss_pred CCCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEE
Confidence 45678888876432222 22334556778899999998 665544 6899999997665 3344444556666778
Q ss_pred cCCCCCCEEEEEcCCCceEEEeCCCCCc---eeecCC----------CCceEEEEEcCCCCeEEEEecCCcEEEEeCC-C
Q 019006 150 PSRRGPPLVVSGSDDGTAKLWDMRQRGA---IQTFPD----------KYQITAVSFSDASDKIYTGGIDNDVKVWDLR-K 215 (347)
Q Consensus 150 ~~~~~~~~~~s~~~d~~i~iwd~~~~~~---~~~~~~----------~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~-~ 215 (347)
+++++..++++...++.+.+||+..... +..+.. ...+.+++|+|+++.+++...++.|++||+. .
T Consensus 93 ~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~ 172 (347)
T 3hfq_A 93 VDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDA 172 (347)
T ss_dssp EETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTT
T ss_pred ECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCC
Confidence 8887765555555889999999963322 222221 1247889999999955566678899999998 4
Q ss_pred CceEE--EecCC-CCceeEEEECCCCCEEEE-EcCCCcEEEEeCCCCCCcCceeEEEecccccc--ccceEEEEECCCCC
Q 019006 216 GEVSM--TLQGH-QDMITGMSLSPDGSYLLT-NGMDCKLCIWDMRPYAPQNRCVKILEGHQHNF--EKNLLKCGWSPDGS 289 (347)
Q Consensus 216 ~~~~~--~~~~~-~~~i~~v~~~~~~~~l~t-~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~s~~g~ 289 (347)
++... .+..+ ...+..++|+|+|+++++ ...++.+.+|++............+....... ...+..++|+|||+
T Consensus 173 g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~ 252 (347)
T 3hfq_A 173 GQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGH 252 (347)
T ss_dssp SCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSC
T ss_pred CcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCC
Confidence 54322 22222 235778999999996665 56678999999874211112222222221110 13477899999999
Q ss_pred EE-EEeeCCCeEEEEeCCC---ceeeEEecCCccCeeeEEEcCCCCEEEEecC-CCcEEeec
Q 019006 290 KV-TAGSSDRMVYIWDTTS---RRILYKLPGHTGSVNESVFHATEPVIGSCSS-DKQIYLGE 346 (347)
Q Consensus 290 ~l-~sgs~dg~i~vwd~~~---~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~-D~~i~i~~ 346 (347)
+| ++...++.|.+|++.. .+.+..+..|...+..++|+|++++|+.++. ++.|.+|+
T Consensus 253 ~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~ 314 (347)
T 3hfq_A 253 FLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYA 314 (347)
T ss_dssp EEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred EEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEE
Confidence 88 4566789999999873 3556677777778999999999998887775 48899994
No 144
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.93 E-value=1.8e-23 Score=201.26 Aligned_cols=275 Identities=10% Similarity=0.087 Sum_probs=199.2
Q ss_pred cEEEEEECCCCCeEEEeeCCCcEEEEeccCCC-eeeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEECCCCceeee
Q 019006 59 AVYTMKFNPAGTVIASGSHDRDIFLWHVHGDC-KNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKK 137 (347)
Q Consensus 59 ~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 137 (347)
.|.+++|+|||+.|++++. +.|++|++.+.. .....+..|...+..++|+|||++|+.++ ++.|++||+.+++....
T Consensus 110 ~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~ 187 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQL 187 (741)
T ss_dssp ESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEEC
T ss_pred CcceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEe
Confidence 3789999999999999887 999999996531 02334667788899999999999999887 46999999988765543
Q ss_pred eeccCcc----------------eeEeecCCCCCCEEEEEcCCC---------------------------------ceE
Q 019006 138 MAEHNSF----------------VNSCCPSRRGPPLVVSGSDDG---------------------------------TAK 168 (347)
Q Consensus 138 ~~~~~~~----------------v~~~~~~~~~~~~~~s~~~d~---------------------------------~i~ 168 (347)
...+... +..+.+++++..+ ++++.|+ .|.
T Consensus 188 ~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l-~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~ 266 (741)
T 2ecf_A 188 TADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAI-AYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLG 266 (741)
T ss_dssp CCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCE-EEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEE
T ss_pred ccCCccceeccccceeeeeccccccceEECCCCCEE-EEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEE
Confidence 3322221 3557788887655 4444443 788
Q ss_pred EEeCCC-CCceeec---CCCCceEEEEEcCCCCeEEEEec-----CCcEEEEeCCCCceEEEecCCCC----ceeEEEEC
Q 019006 169 LWDMRQ-RGAIQTF---PDKYQITAVSFSDASDKIYTGGI-----DNDVKVWDLRKGEVSMTLQGHQD----MITGMSLS 235 (347)
Q Consensus 169 iwd~~~-~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~-----dg~i~iwd~~~~~~~~~~~~~~~----~i~~v~~~ 235 (347)
+||+.+ ++..... .+...+..++| |+++.|+.++. +..|++||+.+++....+..+.. .+..++|+
T Consensus 267 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~s 345 (741)
T 2ecf_A 267 VISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFL 345 (741)
T ss_dssp EECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEEC
T ss_pred EEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEEC
Confidence 899987 7654433 24457899999 99999987654 56799999999887666655443 45689999
Q ss_pred CCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEeccccccccceEEE-EECCCCCEEEE-eeCCC--eEEEEeCCC-cee
Q 019006 236 PDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKC-GWSPDGSKVTA-GSSDR--MVYIWDTTS-RRI 310 (347)
Q Consensus 236 ~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~s~~g~~l~s-gs~dg--~i~vwd~~~-~~~ 310 (347)
|+|+++++++.|+.++||.+... .. ...+..+ ...+..+ .|+|+|+.|+. ++.++ .++||++.. +..
T Consensus 346 pdg~~~~~~~~~g~~~l~~~~~~---~~-~~~l~~~----~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~ 417 (741)
T 2ecf_A 346 DDGSILWSSERTGFQHLYRIDSK---GK-AAALTHG----NWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQGGQ 417 (741)
T ss_dssp TTSCEEEEECTTSSCEEEEECSS---SC-EEESCCS----SSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTCCC
T ss_pred CCCeEEEEecCCCccEEEEEcCC---CC-eeeeeec----ceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCCCC
Confidence 99999999999998888876521 12 3334333 2345565 59999998764 55555 899998864 555
Q ss_pred eEEecCCccCeeeEEEcCCCCEEEEecCC----CcEEeec
Q 019006 311 LYKLPGHTGSVNESVFHATEPVIGSCSSD----KQIYLGE 346 (347)
Q Consensus 311 ~~~~~~h~~~v~~~~~~~~~~~l~s~s~D----~~i~i~~ 346 (347)
+.++.. ...+..++|+|+++.|+....+ ..+++++
T Consensus 418 ~~~l~~-~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~ 456 (741)
T 2ecf_A 418 PQRLSK-APGMHSASFARNASVYVDSWSNNSTPPQIELFR 456 (741)
T ss_dssp CEECCC-SCSEEEEEECTTSSEEEEEEEETTEEEEEEEEE
T ss_pred eeeccc-CCCceEEEECCCCCEEEEEecCCCCCCeEEEEE
Confidence 666765 6678899999999988866543 4566654
No 145
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.93 E-value=5.2e-22 Score=172.42 Aligned_cols=273 Identities=10% Similarity=0.105 Sum_probs=188.3
Q ss_pred EecCccccEEEEEECCCCCeEEEeeC-CCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEecCCC---eEEEE
Q 019006 52 LLTGHQSAVYTMKFNPAGTVIASGSH-DRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDK---TLRAW 127 (347)
Q Consensus 52 ~~~~h~~~V~~v~~~~~~~~l~s~~~-d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg---~i~iw 127 (347)
.+..+...+ .++|+|+|+.|++++. ++.|++|+..........+..+.....+++|+|++++|+++..++ .|.+|
T Consensus 35 ~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~ 113 (331)
T 3u4y_A 35 QITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSY 113 (331)
T ss_dssp EEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEE
T ss_pred eEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEE
Confidence 334455566 9999999996665555 899999998654322445555655555599999999999655553 89999
Q ss_pred ECCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCCc-eEEEeCCCCCce-----eecCCCCceEEEEEcCCCCeEEE
Q 019006 128 DVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGT-AKLWDMRQRGAI-----QTFPDKYQITAVSFSDASDKIYT 201 (347)
Q Consensus 128 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~-i~iwd~~~~~~~-----~~~~~~~~v~~~~~~~~~~~l~~ 201 (347)
|+.+++.+..+..+ .....+++++++..++++...++. +.+|++.....+ ..+........++|+|+++++++
T Consensus 114 d~~~~~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v 192 (331)
T 3u4y_A 114 SFLKNKFISTIPIP-YDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFV 192 (331)
T ss_dssp ETTTTEEEEEEECC-TTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEE
T ss_pred ECCCCCeEEEEECC-CCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEE
Confidence 99998877766543 345678888888778888788788 999998754433 22344456889999999997665
Q ss_pred E-ecCCcEEEEeCCCCce---EEEecCCCCceeEEEECCCCCEEEEEc-CCCcEEEEeCCCCCCcCceeEEEeccc---c
Q 019006 202 G-GIDNDVKVWDLRKGEV---SMTLQGHQDMITGMSLSPDGSYLLTNG-MDCKLCIWDMRPYAPQNRCVKILEGHQ---H 273 (347)
Q Consensus 202 ~-~~dg~i~iwd~~~~~~---~~~~~~~~~~i~~v~~~~~~~~l~t~~-~d~~i~~wd~~~~~~~~~~~~~~~~~~---~ 273 (347)
+ ..++.|++||+.+++. ...+..+ ..+..++|+|+|++++.++ .++.|.+||+...+. ..+..+.... .
T Consensus 193 ~~~~~~~v~v~d~~~~~~~~~~~~~~~~-~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~--~~~~~~~~~~~~~~ 269 (331)
T 3u4y_A 193 ANLIGNSIGILETQNPENITLLNAVGTN-NLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTL--SFVKSFGHGLLIDP 269 (331)
T ss_dssp EETTTTEEEEEECSSTTSCEEEEEEECS-SCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEE--EEEEEEECCCCCCC
T ss_pred EeCCCCeEEEEECCCCcccceeeeccCC-CCCceEEECCCCCEEEEEEcCCCEEEEEECCCCce--eeecccccccccCC
Confidence 5 4688999999998887 6666644 5578899999999776654 577899999874321 1122222210 0
Q ss_pred ccccceEEEEECCCCCEEEEee-CCCeEEEEeCCCceeeEEecCCccCeeeEEEcCCC
Q 019006 274 NFEKNLLKCGWSPDGSKVTAGS-SDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATE 330 (347)
Q Consensus 274 ~~~~~~~~~~~s~~g~~l~sgs-~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~ 330 (347)
........++|+|||++|++++ .++.|++||+.....- .+.+.+..-....++|+.
T Consensus 270 ~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~-~~~~~~~~g~~~~~~~~~ 326 (331)
T 3u4y_A 270 RPLFGANQMALNKTETKLFISANISRELKVFTISGKVVG-YVAGIEANGGIAICHPDK 326 (331)
T ss_dssp GGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCEEE-ECTTCCCBSCEEECCCC-
T ss_pred CCcccccceEECCCCCEEEEecCCCCcEEEEEecCCccc-ceecccccCCeEEECCcc
Confidence 1111224578999999886555 5679999999876543 344444333344555554
No 146
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.92 E-value=3.6e-22 Score=174.75 Aligned_cols=241 Identities=13% Similarity=0.121 Sum_probs=186.8
Q ss_pred ccceeEEEEcCCCCEEEEecC-------CCeEEEEECCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeC
Q 019006 100 KNAILDLHWTTDGSQIISASP-------DKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDM 172 (347)
Q Consensus 100 ~~~v~~~~~~~~~~~l~s~~~-------dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~ 172 (347)
...+..++|+|+++++++++. ++.|.+||..+++.+..+... .....+.+++++..++++...++.|.+||.
T Consensus 40 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~ 118 (353)
T 3vgz_A 40 GKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHND-LKPFGATINNTTQTLWFGNTVNSAVTAIDA 118 (353)
T ss_dssp ESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEES-SCCCSEEEETTTTEEEEEETTTTEEEEEET
T ss_pred ccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecC-CCcceEEECCCCCEEEEEecCCCEEEEEeC
Confidence 346788999999998888774 568999999999887776543 334556777777667788888899999999
Q ss_pred CCCCceeecCCCC----------ceEEEEEcCCCCeEEEEe--cCCcEEEEeCCCCceEEEecCCCCceeEEEECCCCCE
Q 019006 173 RQRGAIQTFPDKY----------QITAVSFSDASDKIYTGG--IDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSY 240 (347)
Q Consensus 173 ~~~~~~~~~~~~~----------~v~~~~~~~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~ 240 (347)
.+++.+..+.... .+..+.|+|+++.+++++ .++.|.+||..+++....+..+...+.+++|+|++++
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~ 198 (353)
T 3vgz_A 119 KTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKR 198 (353)
T ss_dssp TTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTE
T ss_pred CCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCE
Confidence 9888766654321 268899999999888766 4788999999999888888755566889999999999
Q ss_pred EEEEcCCCcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEEEEeeC-CCeEEEEeCCCceeeEEecCCcc
Q 019006 241 LLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSS-DRMVYIWDTTSRRILYKLPGHTG 319 (347)
Q Consensus 241 l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~-dg~i~vwd~~~~~~~~~~~~h~~ 319 (347)
+++++.++.|.+||+... .....+..........+..++|+|+|++|++++. ++.|++||..+++.+..+..+.
T Consensus 199 l~~~~~~~~i~~~d~~~~----~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~- 273 (353)
T 3vgz_A 199 LYTTNADGELITIDTADN----KILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPE- 273 (353)
T ss_dssp EEEECTTSEEEEEETTTT----EEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSS-
T ss_pred EEEEcCCCeEEEEECCCC----eEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCC-
Confidence 999999999999998743 3333333211112345678899999998776665 5899999999999888777544
Q ss_pred CeeeEEEcCCCCE-EEEecCCCcEEeecC
Q 019006 320 SVNESVFHATEPV-IGSCSSDKQIYLGEI 347 (347)
Q Consensus 320 ~v~~~~~~~~~~~-l~s~s~D~~i~i~~~ 347 (347)
...++|+|+++. +++...++.|.+||+
T Consensus 274 -~~~~~~s~dg~~l~v~~~~~~~v~~~d~ 301 (353)
T 3vgz_A 274 -SLAVLFNPARNEAYVTHRQAGKVSVIDA 301 (353)
T ss_dssp -CCCEEEETTTTEEEEEETTTTEEEEEET
T ss_pred -CceEEECCCCCEEEEEECCCCeEEEEEC
Confidence 367999999984 555557999999984
No 147
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.92 E-value=3.1e-23 Score=176.54 Aligned_cols=239 Identities=15% Similarity=0.123 Sum_probs=173.2
Q ss_pred eEecCccccEEEEEECCCCCeEEEeeCCCcEEEEeccCCCeeeEEEeCc-ccceeEEEEcCCCCEEEEec--CCCeEEEE
Q 019006 51 MLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGH-KNAILDLHWTTDGSQIISAS--PDKTLRAW 127 (347)
Q Consensus 51 ~~~~~h~~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~l~s~~--~dg~i~iw 127 (347)
..+..|...|.+++|+|+|++|++++ ++.|++|++.+.........+| ...+.+++|+|++++|++++ .++..+||
T Consensus 35 ~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~ 113 (297)
T 2ojh_A 35 RVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIY 113 (297)
T ss_dssp EEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEE
T ss_pred eeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcceEE
Confidence 34567889999999999999999987 7899999996512333334455 36789999999999999998 33455555
Q ss_pred E--CCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCC--CCCceeecCCCCceEEEEEcCCCCeEEEEe
Q 019006 128 D--VETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMR--QRGAIQTFPDKYQITAVSFSDASDKIYTGG 203 (347)
Q Consensus 128 d--~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 203 (347)
. ..+++ ...+..+. .+..+.+++++..++++++.++.+++|++. ++.......+...+.++.|+|+++.++.++
T Consensus 114 ~~~~~~~~-~~~~~~~~-~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~ 191 (297)
T 2ojh_A 114 LLPSTGGT-PRLMTKNL-PSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNS 191 (297)
T ss_dssp EEETTCCC-CEECCSSS-SEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEE
T ss_pred EEECCCCc-eEEeecCC-CccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEEEEEe
Confidence 4 44443 33333333 366677888876666688899999999853 344333344556789999999999887665
Q ss_pred -cCCcEEEEeCC-CCceEEEecCCCCceeEEEECCCCCEEEEEcCC-----------CcEEEEeCCCCCCcCceeEEEec
Q 019006 204 -IDNDVKVWDLR-KGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMD-----------CKLCIWDMRPYAPQNRCVKILEG 270 (347)
Q Consensus 204 -~dg~i~iwd~~-~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~~d-----------~~i~~wd~~~~~~~~~~~~~~~~ 270 (347)
.++.+++|++. .+.....+..|...+..++|+|++++|+.++.+ +.|.+||+..... ..+..+..
T Consensus 192 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~--~~~~~~~~ 269 (297)
T 2ojh_A 192 SRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNV--ETLFDLFG 269 (297)
T ss_dssp CTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSC--EEEEEEEE
T ss_pred cCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCc--eeeeccCC
Confidence 58899999876 455566777777789999999999999988765 5699999875321 22222223
Q ss_pred cccccccceEEEEECCCCCEEEEeeCCC
Q 019006 271 HQHNFEKNLLKCGWSPDGSKVTAGSSDR 298 (347)
Q Consensus 271 ~~~~~~~~~~~~~~s~~g~~l~sgs~dg 298 (347)
+ ...+..++|+|+|++|++++.+.
T Consensus 270 ~----~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 270 G----QGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp S----TTTSCSCCBCTTSSEEEEEEECC
T ss_pred C----CcccccceECCCCCEEEEEEecc
Confidence 3 23566788999999998887653
No 148
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.92 E-value=1.3e-21 Score=172.09 Aligned_cols=264 Identities=10% Similarity=0.096 Sum_probs=174.9
Q ss_pred eCCCcEEEEeccCCCeee--EEEeCcccceeEEEEcCCCCEEEEecCC----CeEEEEECCC--Cce--eeeeeccCcce
Q 019006 76 SHDRDIFLWHVHGDCKNF--MVLKGHKNAILDLHWTTDGSQIISASPD----KTLRAWDVET--GKQ--IKKMAEHNSFV 145 (347)
Q Consensus 76 ~~d~~v~~w~~~~~~~~~--~~~~~h~~~v~~~~~~~~~~~l~s~~~d----g~i~iwd~~~--~~~--~~~~~~~~~~v 145 (347)
+.++.|++|.++.....+ .... +......++|+|++++|++++.+ +.+.+|++.. ++. +.....+....
T Consensus 24 ~~~~~i~~~~~d~~~g~~~~~~~~-~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p 102 (361)
T 3scy_A 24 GNSKGIYTFRFNEETGESLPLSDA-EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADP 102 (361)
T ss_dssp SSCCEEEEEEEETTTCCEEEEEEE-ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCE
T ss_pred CCCCCEEEEEEeCCCCCEEEeecc-cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCc
Confidence 346789999875332221 1122 66778889999999999998876 7999998865 332 22333233344
Q ss_pred eEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeec------CC---------CCceEEEEEcCCCCeEEEEe-cCCcEE
Q 019006 146 NSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTF------PD---------KYQITAVSFSDASDKIYTGG-IDNDVK 209 (347)
Q Consensus 146 ~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~------~~---------~~~v~~~~~~~~~~~l~~~~-~dg~i~ 209 (347)
..+++ ++..++++...++.+.+|++.....+... .. ...+.+++|+|+++++++++ .++.|+
T Consensus 103 ~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~ 180 (361)
T 3scy_A 103 CYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIH 180 (361)
T ss_dssp EEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEE
T ss_pred EEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEE
Confidence 44444 44445555667899999999754433211 11 12357899999999776655 578999
Q ss_pred EEeCCCCc-------e------EEEecCCCCceeEEEECCCCCEEEEEc-CCCcEEEEeCCCCCCcCceeEEEecccccc
Q 019006 210 VWDLRKGE-------V------SMTLQGHQDMITGMSLSPDGSYLLTNG-MDCKLCIWDMRPYAPQNRCVKILEGHQHNF 275 (347)
Q Consensus 210 iwd~~~~~-------~------~~~~~~~~~~i~~v~~~~~~~~l~t~~-~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~ 275 (347)
+|++.... . ......+......++|+|+|+++++++ .++.|.+||+.... ......+......
T Consensus 181 v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~--~~~~~~~~~~~~~- 257 (361)
T 3scy_A 181 KFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGM--LDEIQTVAADTVN- 257 (361)
T ss_dssp EEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTE--EEEEEEEESCSSC-
T ss_pred EEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCc--eEEeEEEecCCCC-
Confidence 99886433 1 111222344578899999999887776 68999999987321 1112222221111
Q ss_pred ccceEEEEECCCCCEEEEeeC--CCeEEEEeCC--Cce--eeEEecCCccCeeeEEEcCCCCEEEEec-CCCcEEeec
Q 019006 276 EKNLLKCGWSPDGSKVTAGSS--DRMVYIWDTT--SRR--ILYKLPGHTGSVNESVFHATEPVIGSCS-SDKQIYLGE 346 (347)
Q Consensus 276 ~~~~~~~~~s~~g~~l~sgs~--dg~i~vwd~~--~~~--~~~~~~~h~~~v~~~~~~~~~~~l~s~s-~D~~i~i~~ 346 (347)
......++|+|||++|+++.. ++.|.+|++. +++ .+..+.. ...+..++|+|++++|+.++ .++.|.+|+
T Consensus 258 ~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~ 334 (361)
T 3scy_A 258 AQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFE 334 (361)
T ss_dssp CCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEE
T ss_pred CCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEE
Confidence 123578899999999977665 4899999985 344 4455555 55788999999999888777 678899864
No 149
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.91 E-value=6.9e-22 Score=172.62 Aligned_cols=261 Identities=12% Similarity=0.069 Sum_probs=183.0
Q ss_pred EEEECCCCCeEEEeeCCCcEEEEeccCCCeeeEEEeCcc-cceeEEEEcCCCCEEE-EecCCCeEEEEECCCCceeeeee
Q 019006 62 TMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHK-NAILDLHWTTDGSQII-SASPDKTLRAWDVETGKQIKKMA 139 (347)
Q Consensus 62 ~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~l~-s~~~dg~i~iwd~~~~~~~~~~~ 139 (347)
.+++++++.++++++.++.|++||..+. +....+..+. ..+..++|+|++++++ +...++.|.+||+.+++.+..+.
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~-~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~ 82 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASD-TVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHAN 82 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTT-EEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCC-cEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEE
Confidence 3467788899999999999999998643 3444444332 2578899999998664 55678999999999988776665
Q ss_pred ccC------cceeEeecCCCCCCEEEEEcC------------CCceEEEeCCCCC---ceeecCCCCceEEEEEcCCCCe
Q 019006 140 EHN------SFVNSCCPSRRGPPLVVSGSD------------DGTAKLWDMRQRG---AIQTFPDKYQITAVSFSDASDK 198 (347)
Q Consensus 140 ~~~------~~v~~~~~~~~~~~~~~s~~~------------d~~i~iwd~~~~~---~~~~~~~~~~v~~~~~~~~~~~ 198 (347)
... ..+..+.+++++. ++++++. ++.|.+||+.+++ .+..+.....+.+++|+|+++
T Consensus 83 ~~~~~~~~~~~~~~~~~spdg~-~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~- 160 (349)
T 1jmx_B 83 LSSVPGEVGRSMYSFAISPDGK-EVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGS- 160 (349)
T ss_dssp SCCSTTEEEECSSCEEECTTSS-EEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSC-
T ss_pred cccccccccccccceEECCCCC-EEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECCCCc-
Confidence 322 2255667777765 4555554 4899999998743 333444445688899999999
Q ss_pred EEEEecCCcEEEEeCCCCceEEEecCCCC------------------------ceeEEEECCCCCE-----------EEE
Q 019006 199 IYTGGIDNDVKVWDLRKGEVSMTLQGHQD------------------------MITGMSLSPDGSY-----------LLT 243 (347)
Q Consensus 199 l~~~~~dg~i~iwd~~~~~~~~~~~~~~~------------------------~i~~v~~~~~~~~-----------l~t 243 (347)
+++++. .|++||+.+++....+..+.. ....+++++++.. +..
T Consensus 161 l~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 238 (349)
T 1jmx_B 161 LYVAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSV 238 (349)
T ss_dssp EEEESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEE
T ss_pred EEEccC--cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEE
Confidence 666543 499999998887766653320 2344666654421 112
Q ss_pred EcCCCcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECC-CCCEEEEeeCCCeEEEEeCCCceeeEEecCCccCee
Q 019006 244 NGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSP-DGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVN 322 (347)
Q Consensus 244 ~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-~g~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~v~ 322 (347)
...++.+.+|++.. ....+..++|+| +|++|+++ ++.|++||+.+++.+..+.. ...+.
T Consensus 239 ~~~~~~~~~~~~~~-----------------~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~-~~~~~ 298 (349)
T 1jmx_B 239 DLKTGKTHTQEFAD-----------------LTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANL-DHTYY 298 (349)
T ss_dssp ETTTCCEEEEEEEE-----------------CSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEEC-SSCCC
T ss_pred eccCCcEEeccccc-----------------CCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcC-CCCcc
Confidence 22334444444321 123567889999 99999988 88999999999998877764 34578
Q ss_pred eEEEcCCCCEEEEecCCCcEEeecC
Q 019006 323 ESVFHATEPVIGSCSSDKQIYLGEI 347 (347)
Q Consensus 323 ~~~~~~~~~~l~s~s~D~~i~i~~~ 347 (347)
.++|+|+++.|++++.|+.|++||+
T Consensus 299 ~~~~s~dg~~l~~~~~~~~v~v~d~ 323 (349)
T 1jmx_B 299 CVAFDKKGDKLYLGGTFNDLAVFNP 323 (349)
T ss_dssp EEEECSSSSCEEEESBSSEEEEEET
T ss_pred ceEECCCCCEEEEecCCCeEEEEec
Confidence 9999999998888889999999985
No 150
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.91 E-value=1.2e-22 Score=194.46 Aligned_cols=275 Identities=12% Similarity=0.075 Sum_probs=191.0
Q ss_pred EEEEEECCCCCeEEEeeCCCcEEEEeccCCCeeeEEEeCcc-----------------cceeEEEEcCCCCEEEEecCCC
Q 019006 60 VYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHK-----------------NAILDLHWTTDGSQIISASPDK 122 (347)
Q Consensus 60 V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~-----------------~~v~~~~~~~~~~~l~s~~~dg 122 (347)
+..+.|. |..+++++.|+ | +||+.+.......+..|. ..|.+++|+|+ ++++.+ .|+
T Consensus 28 ~~~~~w~--g~~~~~~~~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~-~~~ 101 (706)
T 2z3z_A 28 VVGLQWM--GDNYVFIEGDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLF-TQG 101 (706)
T ss_dssp CTTCEEE--TTEEEEEETTE-E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEE-ETT
T ss_pred CCCCcCc--CCeEEEEeCCc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEEE-ECC
Confidence 4456777 67777888888 8 999864322001222332 46999999999 666555 459
Q ss_pred eEEEEECCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCC-----CCceeecCCCCc-----------
Q 019006 123 TLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQ-----RGAIQTFPDKYQ----------- 186 (347)
Q Consensus 123 ~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~-----~~~~~~~~~~~~----------- 186 (347)
.+++||+.+++.. .+..+...+..+.+++++. .++++ .++.|++||+.+ +...........
T Consensus 102 ~i~~~d~~~~~~~-~l~~~~~~~~~~~~SpdG~-~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~e 178 (706)
T 2z3z_A 102 GLVGFDMLARKVT-YLFDTNEETASLDFSPVGD-RVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQR 178 (706)
T ss_dssp EEEEEETTTTEEE-EEECCTTCCTTCEECTTSS-EEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGG
T ss_pred EEEEEECCCCceE-EccCCcccccCCcCCCCCC-EEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhh
Confidence 9999999887654 3444555666778888775 45553 679999999987 665554333222
Q ss_pred ----eEEEEEcCCCCeEEEEe---------------------------------cCCcEEEEeCCCCceEEEec--CCCC
Q 019006 187 ----ITAVSFSDASDKIYTGG---------------------------------IDNDVKVWDLRKGEVSMTLQ--GHQD 227 (347)
Q Consensus 187 ----v~~~~~~~~~~~l~~~~---------------------------------~dg~i~iwd~~~~~~~~~~~--~~~~ 227 (347)
+.++.|+|+++.|++++ .+..|++||+.+++...... .|..
T Consensus 179 e~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~ 258 (706)
T 2z3z_A 179 EFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEK 258 (706)
T ss_dssp CTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTC
T ss_pred hcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCce
Confidence 47899999999999887 34679999999887544332 4667
Q ss_pred ceeEEEECCCCCEEEEEcCCC-----cEEEEeCCCCCCcCceeEEEeccccccccceEEEEECC--CCCEEEEeeCCCeE
Q 019006 228 MITGMSLSPDGSYLLTNGMDC-----KLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSP--DGSKVTAGSSDRMV 300 (347)
Q Consensus 228 ~i~~v~~~~~~~~l~t~~~d~-----~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~--~g~~l~sgs~dg~i 300 (347)
.+..++|+|+|++|++++.++ .|.+||+.... ................+..++|+| ||++|++++.||.+
T Consensus 259 ~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~---~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~ 335 (706)
T 2z3z_A 259 FLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGR---FVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWN 335 (706)
T ss_dssp EEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCC---EEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSC
T ss_pred eEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCc---eeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCcc
Confidence 799999999999999887665 89999987431 111112111111111235678999 99999999999999
Q ss_pred EEEeCC-CceeeEEecCCccCeee-EEEcCCCCEEEEecC-CC----cEEeec
Q 019006 301 YIWDTT-SRRILYKLPGHTGSVNE-SVFHATEPVIGSCSS-DK----QIYLGE 346 (347)
Q Consensus 301 ~vwd~~-~~~~~~~~~~h~~~v~~-~~~~~~~~~l~s~s~-D~----~i~i~~ 346 (347)
++|++. ++..+..+..|...+.. ++|+|+++.|+.++. ++ .|+.+|
T Consensus 336 ~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d 388 (706)
T 2z3z_A 336 HLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCID 388 (706)
T ss_dssp EEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEE
T ss_pred EEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEE
Confidence 999876 56777788888888877 799999987765554 44 555554
No 151
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.91 E-value=3e-21 Score=169.91 Aligned_cols=265 Identities=11% Similarity=0.089 Sum_probs=181.4
Q ss_pred ccccEEEEEECCCCCeEEEeeCC----CcEEEEeccCC-C--eeeEEEeCcccceeEEEEcCCCCEEEEec-CCCeEEEE
Q 019006 56 HQSAVYTMKFNPAGTVIASGSHD----RDIFLWHVHGD-C--KNFMVLKGHKNAILDLHWTTDGSQIISAS-PDKTLRAW 127 (347)
Q Consensus 56 h~~~V~~v~~~~~~~~l~s~~~d----~~v~~w~~~~~-~--~~~~~~~~h~~~v~~~~~~~~~~~l~s~~-~dg~i~iw 127 (347)
|...+..++|+|+|++|++++.+ +.|.+|++... . ..+.....+......+++ ++++|++++ .++.+.+|
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~ 125 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVF 125 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEE
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEE
Confidence 66778889999999999998886 79999998653 2 222233445556777787 788777665 67899999
Q ss_pred ECCCCceeeeee---cc-----------CcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCc--------------ee
Q 019006 128 DVETGKQIKKMA---EH-----------NSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGA--------------IQ 179 (347)
Q Consensus 128 d~~~~~~~~~~~---~~-----------~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~--------------~~ 179 (347)
++.....+..+. .+ ...+..+++++++..++++...++.+.+|++..... ..
T Consensus 126 ~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~ 205 (361)
T 3scy_A 126 PIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAF 205 (361)
T ss_dssp EBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEE
T ss_pred EeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccce
Confidence 997543322211 11 122355788888766777777789999998875431 12
Q ss_pred ecCCCCceEEEEEcCCCCeEEEEe-cCCcEEEEeCCCCceE--EEe---cCCCCceeEEEECCCCCEEEEEcCC--CcEE
Q 019006 180 TFPDKYQITAVSFSDASDKIYTGG-IDNDVKVWDLRKGEVS--MTL---QGHQDMITGMSLSPDGSYLLTNGMD--CKLC 251 (347)
Q Consensus 180 ~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~--~~~---~~~~~~i~~v~~~~~~~~l~t~~~d--~~i~ 251 (347)
..........++|+|+++++++++ .++.|.+||+.+++.. ..+ ..+......++|+|+|++|+++..+ +.|.
T Consensus 206 ~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~ 285 (361)
T 3scy_A 206 KVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVA 285 (361)
T ss_dssp ECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEE
T ss_pred ecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEE
Confidence 234455678999999999888777 6899999999876532 222 2233446799999999998776654 8999
Q ss_pred EEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEEEEee-CCCeEEEE--eCCCceeeEEe-cCCccCeeeEEEc
Q 019006 252 IWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGS-SDRMVYIW--DTTSRRILYKL-PGHTGSVNESVFH 327 (347)
Q Consensus 252 ~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs-~dg~i~vw--d~~~~~~~~~~-~~h~~~v~~~~~~ 327 (347)
+|++.........+..+.. ...+..++|+|||++|++++ .++.|.+| |..++++.... ..+...+.+++|.
T Consensus 286 v~~~~~~~g~~~~~~~~~~-----g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~~~~p~~v~~~ 360 (361)
T 3scy_A 286 IFKVDETNGTLTKVGYQLT-----GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDIKKDIKVDKPVCLKFV 360 (361)
T ss_dssp EEEECTTTCCEEEEEEEEC-----SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEECSCCEECSSEEEEEEE
T ss_pred EEEEcCCCCcEEEeeEecC-----CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeecceeeeCCCCeEEEEc
Confidence 9998632212222222222 13466889999999998887 67899996 55567665432 2244578888885
No 152
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.90 E-value=4.7e-21 Score=168.99 Aligned_cols=273 Identities=11% Similarity=0.154 Sum_probs=179.6
Q ss_pred EEEeeCC--CcEEEEeccCCCeeeEEEe----CcccceeEEEEcCCCCEEEEecCCCeEEEEECC-CCceeeeeecc-Cc
Q 019006 72 IASGSHD--RDIFLWHVHGDCKNFMVLK----GHKNAILDLHWTTDGSQIISASPDKTLRAWDVE-TGKQIKKMAEH-NS 143 (347)
Q Consensus 72 l~s~~~d--~~v~~w~~~~~~~~~~~~~----~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~-~~ 143 (347)
|++|+.. +.|++|+++.....+..+. +....+..++|+|++++|++++.+ .|.+|++. +++........ ..
T Consensus 5 ~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g 83 (365)
T 1jof_A 5 LMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGG 83 (365)
T ss_dssp EEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCS
T ss_pred EEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCC
Confidence 4455542 4577777643222222111 233467899999999999998888 99999987 66654322211 12
Q ss_pred ceeEeecCCCCCC-EEEEEc-------------CCCceEEEeCCC-CCceeec-----CCCCceEEEEEcCCCCeEEEEe
Q 019006 144 FVNSCCPSRRGPP-LVVSGS-------------DDGTAKLWDMRQ-RGAIQTF-----PDKYQITAVSFSDASDKIYTGG 203 (347)
Q Consensus 144 ~v~~~~~~~~~~~-~~~s~~-------------~d~~i~iwd~~~-~~~~~~~-----~~~~~v~~~~~~~~~~~l~~~~ 203 (347)
....+++++++.. ++++++ .++++.+|++.. +.....+ .....+.+++|+|++++++++.
T Consensus 84 ~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~ 163 (365)
T 1jof_A 84 HPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSAD 163 (365)
T ss_dssp SGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEE
T ss_pred CCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEc
Confidence 2334666776653 344543 689999999974 4433222 2345789999999999888765
Q ss_pred c-CCcEEEEeCC-CCceE--EEec--CCCCceeEEEECCCCCEEEEEcC-CCcEEEEeCCCCCCcCcee---EEEecccc
Q 019006 204 I-DNDVKVWDLR-KGEVS--MTLQ--GHQDMITGMSLSPDGSYLLTNGM-DCKLCIWDMRPYAPQNRCV---KILEGHQH 273 (347)
Q Consensus 204 ~-dg~i~iwd~~-~~~~~--~~~~--~~~~~i~~v~~~~~~~~l~t~~~-d~~i~~wd~~~~~~~~~~~---~~~~~~~~ 273 (347)
. ++.|++||+. +++.. ..+. .|...+..++|+|+|+++++++. ++.+.+|++.... +... ..+.....
T Consensus 164 ~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~--g~~~~~~~~~~~~~~ 241 (365)
T 1jof_A 164 LTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPAT--HMPVYTHHSFPLIPP 241 (365)
T ss_dssp TTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTT--CCEEEEEEEEESSCT
T ss_pred CCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCC--CcEEEccceEEcCCC
Confidence 3 6789999998 66543 2333 23456899999999999887764 6899999875311 1111 11211111
Q ss_pred cc---cc------ceEEEE-ECCCCCEEEEeeCC-C-----eEEEEeCC-CceeeE---EecCCccCeeeEEEcC---CC
Q 019006 274 NF---EK------NLLKCG-WSPDGSKVTAGSSD-R-----MVYIWDTT-SRRILY---KLPGHTGSVNESVFHA---TE 330 (347)
Q Consensus 274 ~~---~~------~~~~~~-~s~~g~~l~sgs~d-g-----~i~vwd~~-~~~~~~---~~~~h~~~v~~~~~~~---~~ 330 (347)
.. .. .+..++ |+|||++|+++..+ + .|.+|++. ++++.. .+..+...+..++|+| ++
T Consensus 242 ~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg 321 (365)
T 1jof_A 242 GIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSD 321 (365)
T ss_dssp TCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCT
T ss_pred CcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCC
Confidence 11 11 477899 99999998876643 2 89999986 566543 2445666678899999 89
Q ss_pred CEEEEecCC-CcEEeecC
Q 019006 331 PVIGSCSSD-KQIYLGEI 347 (347)
Q Consensus 331 ~~l~s~s~D-~~i~i~~~ 347 (347)
++|+.++.+ ++|.+|++
T Consensus 322 ~~l~v~~~~~~~v~v~~~ 339 (365)
T 1jof_A 322 EWMAITDDQEGWLEIYRW 339 (365)
T ss_dssp TEEEEECSSSCEEEEEEE
T ss_pred CEEEEEEcCCCeEEEEEE
Confidence 999988875 89999974
No 153
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.90 E-value=3.8e-22 Score=177.15 Aligned_cols=290 Identities=12% Similarity=0.096 Sum_probs=191.5
Q ss_pred eeEecCccccEEE-----EEECCCCCeEEEeeC-CCc--EEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEecCC
Q 019006 50 IMLLTGHQSAVYT-----MKFNPAGTVIASGSH-DRD--IFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPD 121 (347)
Q Consensus 50 ~~~~~~h~~~V~~-----v~~~~~~~~l~s~~~-d~~--v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d 121 (347)
...+..|...+.. .+|+|||+.|+.++. ++. |++|++.+. .......++...+..+.|+|||+.|+.++.+
T Consensus 23 ~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g-~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~ 101 (388)
T 3pe7_A 23 VTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQ-VATQLTEGRGDNTFGGFLSPDDDALFYVKDG 101 (388)
T ss_dssp EEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTC-EEEECCCSSCBCSSSCEECTTSSEEEEEETT
T ss_pred eEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCC-ceEEeeeCCCCCccceEEcCCCCEEEEEeCC
Confidence 3455666666666 789999999988887 674 777777532 3333344555555577899999999999999
Q ss_pred CeEEEEECCCCceeeeeeccCcceeEe--ecCCCCCCEEEE----------------------EcCCCceEEEeCCCCCc
Q 019006 122 KTLRAWDVETGKQIKKMAEHNSFVNSC--CPSRRGPPLVVS----------------------GSDDGTAKLWDMRQRGA 177 (347)
Q Consensus 122 g~i~iwd~~~~~~~~~~~~~~~~v~~~--~~~~~~~~~~~s----------------------~~~d~~i~iwd~~~~~~ 177 (347)
+.+++||+.+++....+..+...+... ..++++ .+++. ...+..|.+||+.+++.
T Consensus 102 ~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~ 180 (388)
T 3pe7_A 102 RNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDC-TKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGES 180 (388)
T ss_dssp TEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTS-SEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCE
T ss_pred CeEEEEECCCCcceeeeechhhcccccceeECCCC-CeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCce
Confidence 999999999987655554444433222 234444 34442 22446799999998876
Q ss_pred eeecCCCCceEEEEEcC-CCCeEEEEecC------CcEEEEeCCCCceEEEecCCC--CceeEEEECCCCCEEEEEcC-C
Q 019006 178 IQTFPDKYQITAVSFSD-ASDKIYTGGID------NDVKVWDLRKGEVSMTLQGHQ--DMITGMSLSPDGSYLLTNGM-D 247 (347)
Q Consensus 178 ~~~~~~~~~v~~~~~~~-~~~~l~~~~~d------g~i~iwd~~~~~~~~~~~~~~--~~i~~v~~~~~~~~l~t~~~-d 247 (347)
.........+..+.|+| +++.++....+ ..|.++|...+.. ..+..+. ..+..+.|+|+|+.|+..+. +
T Consensus 181 ~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~ 259 (388)
T 3pe7_A 181 TVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM-RKVKTHAEGESCTHEFWVPDGSALVYVSYLK 259 (388)
T ss_dssp EEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC-EESCCCCTTEEEEEEEECTTSSCEEEEEEET
T ss_pred EEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce-EEeeeCCCCcccccceECCCCCEEEEEecCC
Confidence 55555556788999999 99988776653 3788888765543 3333333 25778899999997765443 1
Q ss_pred ----CcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEEEEe---------eCCCeEEEEeCCCceeeEEe
Q 019006 248 ----CKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAG---------SSDRMVYIWDTTSRRILYKL 314 (347)
Q Consensus 248 ----~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sg---------s~dg~i~vwd~~~~~~~~~~ 314 (347)
..|.+||+...+. +.+..+.++... ........|+|||+.|+.. ..+..|++||+.+++. .++
T Consensus 260 ~~~~~~l~~~d~~~g~~--~~l~~~~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l 335 (388)
T 3pe7_A 260 GSPDRFIYSADPETLEN--RQLTSMPACSHL-MSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQ-HRV 335 (388)
T ss_dssp TCCCEEEEEECTTTCCE--EEEEEECCEEEE-EECTTSSEEEEEECCC------------CCCCEEEEEETTTTEE-EEE
T ss_pred CCCcceEEEEecCCCce--EEEEcCCCceee-eecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCce-EEe
Confidence 2399999875321 222222221000 0001112689999988854 4567899999998765 456
Q ss_pred cCCcc-----------CeeeEEEcCCCCEEEEec-CCCcEEeec
Q 019006 315 PGHTG-----------SVNESVFHATEPVIGSCS-SDKQIYLGE 346 (347)
Q Consensus 315 ~~h~~-----------~v~~~~~~~~~~~l~s~s-~D~~i~i~~ 346 (347)
..|.. .+..++|+|+++.|+.++ .++...||.
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~ 379 (388)
T 3pe7_A 336 ARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYL 379 (388)
T ss_dssp EECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEE
T ss_pred ccccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEE
Confidence 66665 578899999999887665 467666653
No 154
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.90 E-value=5.5e-22 Score=190.34 Aligned_cols=281 Identities=11% Similarity=0.068 Sum_probs=188.5
Q ss_pred eeEecCccc---cEEEEEECCCCCeEEEeeCC---------CcEEEEeccCCCe-eeEEEeCcccceeEEEEcCCCCEEE
Q 019006 50 IMLLTGHQS---AVYTMKFNPAGTVIASGSHD---------RDIFLWHVHGDCK-NFMVLKGHKNAILDLHWTTDGSQII 116 (347)
Q Consensus 50 ~~~~~~h~~---~V~~v~~~~~~~~l~s~~~d---------~~v~~w~~~~~~~-~~~~~~~h~~~v~~~~~~~~~~~l~ 116 (347)
...+.+|.. .|.+++|+|||+.||+++.+ +.+++|++.+... .+....+|...+..++|+|||++|+
T Consensus 50 ~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la 129 (723)
T 1xfd_A 50 TVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLI 129 (723)
T ss_dssp EEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEE
T ss_pred EEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccccccEECCCCCEEE
Confidence 345666664 49999999999999999875 6788999864322 1112234555588999999999999
Q ss_pred EecCCCeEEEEECCCCceeeeeeccCcce------------------eEeecCCCCCCEEEEEcCCC-------------
Q 019006 117 SASPDKTLRAWDVETGKQIKKMAEHNSFV------------------NSCCPSRRGPPLVVSGSDDG------------- 165 (347)
Q Consensus 117 s~~~dg~i~iwd~~~~~~~~~~~~~~~~v------------------~~~~~~~~~~~~~~s~~~d~------------- 165 (347)
.++. +.|++||+.+++.......+...+ ..+.+++++. .|++++.++
T Consensus 130 ~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~-~la~~~~~~~~~~~~~~~~~~~ 207 (723)
T 1xfd_A 130 FIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGT-RLAYAAINDSRVPIMELPTYTG 207 (723)
T ss_dssp EEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSS-EEEEEEEECTTSCEEEECCCSS
T ss_pred EEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCC-EEEEEEECCCccceEEeeccCC
Confidence 8876 799999998887655443332222 5677888775 455554332
Q ss_pred ---------------------ceEEEeCCCCCceeecCC-------CCceEEEEEcCCCCeEEEEecC----CcEEEEeC
Q 019006 166 ---------------------TAKLWDMRQRGAIQTFPD-------KYQITAVSFSDASDKIYTGGID----NDVKVWDL 213 (347)
Q Consensus 166 ---------------------~i~iwd~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~~~d----g~i~iwd~ 213 (347)
.|++||+.++.....+.. ...+..++|+|+++.+++.... ..|++||+
T Consensus 208 ~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~ 287 (723)
T 1xfd_A 208 SIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDA 287 (723)
T ss_dssp SSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEET
T ss_pred cCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeC
Confidence 789999987765444432 3468899999999988766533 57999999
Q ss_pred CCCceEEEecC-CCCce----eEEEECCCCCEEEE--EcCCC------cEEEEeCCCCCCcCceeEEEeccccccccceE
Q 019006 214 RKGEVSMTLQG-HQDMI----TGMSLSPDGSYLLT--NGMDC------KLCIWDMRPYAPQNRCVKILEGHQHNFEKNLL 280 (347)
Q Consensus 214 ~~~~~~~~~~~-~~~~i----~~v~~~~~~~~l~t--~~~d~------~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (347)
.+++....+.. +...+ ..++|+|+|+.|+. +..++ .|.+||+..... ..+...+... ...+.
T Consensus 288 ~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~-~~~~~~l~~~----~~~~~ 362 (723)
T 1xfd_A 288 TTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSS-NDNIQSITSG----DWDVT 362 (723)
T ss_dssp TTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSS-SCCCCBSCCS----SSCEE
T ss_pred CCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCC-ccceeEeecC----CeEEE
Confidence 98876655433 33333 37899999997775 45666 566777322111 0001122211 11233
Q ss_pred -EEEECCCCCEEEEeeCC---CeEEEEeCCCc--eeeEEecC---CccCeeeEEEcCCCCEEEEec
Q 019006 281 -KCGWSPDGSKVTAGSSD---RMVYIWDTTSR--RILYKLPG---HTGSVNESVFHATEPVIGSCS 337 (347)
Q Consensus 281 -~~~~s~~g~~l~sgs~d---g~i~vwd~~~~--~~~~~~~~---h~~~v~~~~~~~~~~~l~s~s 337 (347)
.++|+|||++|+..+.+ +.+++|++... .....+.. |...+..++|+|+++.++...
T Consensus 363 ~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~spdg~~l~~~~ 428 (723)
T 1xfd_A 363 KILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLLKC 428 (723)
T ss_dssp EEEEEETTTTEEEEEESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEEEC
T ss_pred eeeEEcCCCCEEEEEEcCCCCcceEEEEEeCCCCCCcceecccccCCCCeEEEEECCCCCEEEEEc
Confidence 36899999999866554 78999987543 23334554 677899999999999777543
No 155
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.90 E-value=1.2e-21 Score=170.20 Aligned_cols=244 Identities=12% Similarity=0.097 Sum_probs=177.6
Q ss_pred cEEEEEECCCCCeE-EEeeCCCcEEEEeccCCCeeeEEEe-Cc----ccceeEEEEcCCCCEEEEec------------C
Q 019006 59 AVYTMKFNPAGTVI-ASGSHDRDIFLWHVHGDCKNFMVLK-GH----KNAILDLHWTTDGSQIISAS------------P 120 (347)
Q Consensus 59 ~V~~v~~~~~~~~l-~s~~~d~~v~~w~~~~~~~~~~~~~-~h----~~~v~~~~~~~~~~~l~s~~------------~ 120 (347)
.+..++|+|+|+.+ ++++.++.|.+|++.+. +....+. ++ ...+..++|+|++++|++++ .
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~ 113 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTG-ETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQ 113 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTTC-CEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEEC
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCCC-CeEeeEEcCCcccccccccceEECCCCCEEEEEeccccccccccccc
Confidence 47789999999765 56667889999998643 2333333 22 23677899999999998886 5
Q ss_pred CCeEEEEECCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeecCCCCceEEEEEcCCCCeEE
Q 019006 121 DKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIY 200 (347)
Q Consensus 121 dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 200 (347)
++.|.+||+.+++.+..+.. ...+..+.+++++..++++ ++.|.+||+.+++....+........+.|+|++..++
T Consensus 114 ~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~---~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~ 189 (337)
T 1pby_B 114 PTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL---GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVW 189 (337)
T ss_dssp CCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE---SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCC
T ss_pred CceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe---CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEe
Confidence 79999999998877766654 3345566777777655544 6889999999887766554332112336788888766
Q ss_pred EEecCC------------------------cEEEEeCCCCceE-EEecCCCCceeEEEECCCCCEEEEEcCCCcEEEEeC
Q 019006 201 TGGIDN------------------------DVKVWDLRKGEVS-MTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDM 255 (347)
Q Consensus 201 ~~~~dg------------------------~i~iwd~~~~~~~-~~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~ 255 (347)
..+..+ .|.+||+.+++.. ..+..+...+.+++|+|++++++++ ++.|.+||+
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~ 267 (337)
T 1pby_B 190 NQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDL 267 (337)
T ss_dssp CCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEET
T ss_pred eeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEEC
Confidence 544332 4689999988764 2334455678899999999999988 789999998
Q ss_pred CCCCCcCceeEEEeccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCCceeeEEecCCc
Q 019006 256 RPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHT 318 (347)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~ 318 (347)
... +....+... ..+..++|+|+|++|++++.++.|++||+.+++.+..++.+.
T Consensus 268 ~~~----~~~~~~~~~-----~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~~~~~~~~ 321 (337)
T 1pby_B 268 EKN----ASIKRVPLP-----HSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDLPG 321 (337)
T ss_dssp TTT----EEEEEEECS-----SCCCEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEEECGG
T ss_pred CCC----cCcceecCC-----CceeeEEECCCCCEEEEEcCCCcEEEEECcCCcEEEEEEcCC
Confidence 742 333333322 346788999999999999999999999999999888876554
No 156
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.90 E-value=5.3e-21 Score=167.33 Aligned_cols=250 Identities=11% Similarity=0.153 Sum_probs=171.6
Q ss_pred CccccEEEEEECCCCCeEEEeeC---CCcEEEEeccCCC-eeeEEEeCcccceeEEEEcCCCCEEEEec-CCCeEEEEEC
Q 019006 55 GHQSAVYTMKFNPAGTVIASGSH---DRDIFLWHVHGDC-KNFMVLKGHKNAILDLHWTTDGSQIISAS-PDKTLRAWDV 129 (347)
Q Consensus 55 ~h~~~V~~v~~~~~~~~l~s~~~---d~~v~~w~~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~l~s~~-~dg~i~iwd~ 129 (347)
.+...+..++|+|+|+ |++++. ++.|++|++.+.. +.+..+..+...+..++|+|+|++|++++ .++.+.+|++
T Consensus 37 ~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~ 115 (347)
T 3hfq_A 37 AATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKI 115 (347)
T ss_dssp EECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred eccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEe
Confidence 4556778899999999 554443 6899999995432 23333455677889999999999888887 7899999999
Q ss_pred CC-Cc--eeeeeecc---------CcceeEeecCCCCCCEEEEEcCCCceEEEeCC-CCCcee----ecCCCCceEEEEE
Q 019006 130 ET-GK--QIKKMAEH---------NSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMR-QRGAIQ----TFPDKYQITAVSF 192 (347)
Q Consensus 130 ~~-~~--~~~~~~~~---------~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~-~~~~~~----~~~~~~~v~~~~~ 192 (347)
.. +. .+..+... ...+..+++++++. ++++...++.|.+||+. .+.... ..........++|
T Consensus 116 ~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~ 194 (347)
T 3hfq_A 116 AADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVF 194 (347)
T ss_dssp CTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEE
T ss_pred CCCCCeeecceeecCCCCCCccccCCCceEEEECCCCc-EEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEE
Confidence 63 32 22222211 12355678888876 88888889999999998 333221 1223346788999
Q ss_pred cCCCCeEEE-EecCCcEEEEeCCC--Cce--EEEecCCC------CceeEEEECCCCCEEE-EEcCCCcEEEEeCCCCCC
Q 019006 193 SDASDKIYT-GGIDNDVKVWDLRK--GEV--SMTLQGHQ------DMITGMSLSPDGSYLL-TNGMDCKLCIWDMRPYAP 260 (347)
Q Consensus 193 ~~~~~~l~~-~~~dg~i~iwd~~~--~~~--~~~~~~~~------~~i~~v~~~~~~~~l~-t~~~d~~i~~wd~~~~~~ 260 (347)
+|+++++++ ...++.|++|++.. ++. ...+.... ..+..++|+|+|++|+ +...++.|.+||+....
T Consensus 195 spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g- 273 (347)
T 3hfq_A 195 SPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADG- 273 (347)
T ss_dssp CTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGG-
T ss_pred CCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCC-
Confidence 999997665 55778999999874 442 22222221 3478899999999874 55568999999986311
Q ss_pred cCceeEEEeccccccccceEEEEECCCCCEEEEeeC-CCeEEEE--eCCCceee
Q 019006 261 QNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSS-DRMVYIW--DTTSRRIL 311 (347)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~-dg~i~vw--d~~~~~~~ 311 (347)
....+..+..+ ...+..++|+|||++|++++. ++.|.+| |..++++.
T Consensus 274 ~~~~~~~~~~~----~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~ 323 (347)
T 3hfq_A 274 HLTLIQQISTE----GDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLS 323 (347)
T ss_dssp CEEEEEEEECS----SSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEE
T ss_pred cEEEeEEEecC----CCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEE
Confidence 11223333322 124668899999999888775 4899999 65666654
No 157
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.90 E-value=3.5e-22 Score=187.06 Aligned_cols=232 Identities=12% Similarity=0.122 Sum_probs=171.7
Q ss_pred ccceeEEEEcCCCCEEEEecC-CCeEEEEECCCCceeeeeeccC-cceeEeecCCCCCCEEEEEcC---CCceEEEeCCC
Q 019006 100 KNAILDLHWTTDGSQIISASP-DKTLRAWDVETGKQIKKMAEHN-SFVNSCCPSRRGPPLVVSGSD---DGTAKLWDMRQ 174 (347)
Q Consensus 100 ~~~v~~~~~~~~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~s~~~---d~~i~iwd~~~ 174 (347)
..+|.+++|+|||++|++++. ||+++||++.+++. ..+..+. ..+....++++ .++++++. +...++|.+..
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~-~~lt~~~~~~~~~~~~spd--~~l~~~~~~~g~~~~~l~~~~~ 97 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGET-VKLNREPINSVLDPHYGVG--RVILVRDVSKGAEQHALFKVNT 97 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEE-EECCSSCCSEECEECTTCS--EEEEEEECSTTSCCEEEEEEET
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCc-EeeecccccccccccCCCC--eEEEEeccCCCCcceEEEEEec
Confidence 457999999999999999887 99999999866554 4444444 56777888865 56666654 45566665433
Q ss_pred --CCceeecCCCCceEEEEEcCCCCe-EEEEecCCcEEEEeCCCCceEEEecCCCCceeEEEECCCCCEEEEEcCC----
Q 019006 175 --RGAIQTFPDKYQITAVSFSDASDK-IYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMD---- 247 (347)
Q Consensus 175 --~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~~d---- 247 (347)
......+.........+|+|+++. +++.+.++.+.+||+.+++.......+ . .+++|+|||+++++++.+
T Consensus 98 ~~~g~~~~l~~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~-~--~~~~~spDG~~la~~~~~~~~~ 174 (582)
T 3o4h_A 98 SRPGEEQRLEAVKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLP-G--FGFVSDIRGDLIAGLGFFGGGR 174 (582)
T ss_dssp TSTTCCEECTTSCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEES-S--CEEEEEEETTEEEEEEEEETTE
T ss_pred cCCCccccccCCCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCC-C--ceEEECCCCCEEEEEEEcCCCC
Confidence 222223333333446678888764 344444555669999888755444333 2 789999999999988776
Q ss_pred CcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEEEEeeCCC--eEEEEeCCCceeeEEecCCccCeeeEE
Q 019006 248 CKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDR--MVYIWDTTSRRILYKLPGHTGSVNESV 325 (347)
Q Consensus 248 ~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg--~i~vwd~~~~~~~~~~~~h~~~v~~~~ 325 (347)
+.|++||+..... ..+..+ ...+..++|||||++|+++..++ .|++||+.+++.. .+.+|...+..++
T Consensus 175 ~~i~~~d~~~g~~-----~~l~~~----~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~ 244 (582)
T 3o4h_A 175 VSLFTSNLSSGGL-----RVFDSG----EGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYR 244 (582)
T ss_dssp EEEEEEETTTCCC-----EEECCS----SCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHC
T ss_pred eEEEEEcCCCCCc-----eEeecC----CCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhh
Confidence 7899999874321 233333 24568899999999999888888 8999999999887 8888888888888
Q ss_pred --------EcCCCCEEEEecCCCcEEeecC
Q 019006 326 --------FHATEPVIGSCSSDKQIYLGEI 347 (347)
Q Consensus 326 --------~~~~~~~l~s~s~D~~i~i~~~ 347 (347)
|+|++.++++++.|++++||++
T Consensus 245 ~~~~~~~~~spdg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 245 PTAITWLGYLPDGRLAVVARREGRSAVFID 274 (582)
T ss_dssp CSEEEEEEECTTSCEEEEEEETTEEEEEET
T ss_pred hccccceeEcCCCcEEEEEEcCCcEEEEEE
Confidence 9999999999999999999975
No 158
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.90 E-value=7.7e-22 Score=177.74 Aligned_cols=200 Identities=12% Similarity=0.109 Sum_probs=153.9
Q ss_pred cccEEEEEECCCCCeEEEeeCCCcEEEEeccCC---------CeeeE-----EEeCcccceeEEEEcCCCCEEE----Ee
Q 019006 57 QSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGD---------CKNFM-----VLKGHKNAILDLHWTTDGSQII----SA 118 (347)
Q Consensus 57 ~~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~---------~~~~~-----~~~~h~~~v~~~~~~~~~~~l~----s~ 118 (347)
...+..+++++++.++++++.|+ +++|+.... ..... ....+...|.+++|+|++++|+ ++
T Consensus 36 ~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sg 114 (434)
T 2oit_A 36 KERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSS 114 (434)
T ss_dssp CSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEET
T ss_pred CCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEecc
Confidence 34578889999999999999998 888875310 00111 1123566799999999999999 88
Q ss_pred cCCCeEEEEECCCC--------ce---eeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceee-cCCCCc
Q 019006 119 SPDKTLRAWDVETG--------KQ---IKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQT-FPDKYQ 186 (347)
Q Consensus 119 ~~dg~i~iwd~~~~--------~~---~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~-~~~~~~ 186 (347)
+.|+.|++||+.++ +. ...+..|...+..+++++....++++++.||+|++||++++..... ..+...
T Consensus 115 s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~~ 194 (434)
T 2oit_A 115 EYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTVA 194 (434)
T ss_dssp TTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGGGC
T ss_pred CCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCCCc
Confidence 99999999998654 11 3445568889999999988778999999999999999998754433 345668
Q ss_pred eEEEEEcCCCCeEEEEecCCcEEEEeCCCCceEEEecCCC-------CceeEEEECCCCCEEEEEc-CCC------cEEE
Q 019006 187 ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQ-------DMITGMSLSPDGSYLLTNG-MDC------KLCI 252 (347)
Q Consensus 187 v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-------~~i~~v~~~~~~~~l~t~~-~d~------~i~~ 252 (347)
+.+++|+|++.+|++|+.||.|++||.+ ++....+..|. ..|.+++|++++.++++.+ .|| .+++
T Consensus 195 v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i 273 (434)
T 2oit_A 195 VTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVM 273 (434)
T ss_dssp EEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEE
T ss_pred eeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEE
Confidence 9999999999999999999999999998 55555554432 3789999999887775533 333 3899
Q ss_pred EeCCCC
Q 019006 253 WDMRPY 258 (347)
Q Consensus 253 wd~~~~ 258 (347)
||++..
T Consensus 274 ~~l~~~ 279 (434)
T 2oit_A 274 ALLPKK 279 (434)
T ss_dssp EECCCT
T ss_pred EEeccC
Confidence 999854
No 159
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.89 E-value=6.4e-22 Score=189.81 Aligned_cols=268 Identities=12% Similarity=0.079 Sum_probs=183.8
Q ss_pred EEEECCCCCeEEEeeCCCcEEEEeccCCCeeeEEEeCccc---ceeEEEEcCCCCEEEEecC---------CCeEEEEEC
Q 019006 62 TMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKN---AILDLHWTTDGSQIISASP---------DKTLRAWDV 129 (347)
Q Consensus 62 ~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~---~v~~~~~~~~~~~l~s~~~---------dg~i~iwd~ 129 (347)
.++|+|+|++++++ .|++|++|+..+. .....+.+|.. .+.+++|||||++|++++. ++.|++||+
T Consensus 20 ~~~~s~dg~~~~~~-~d~~i~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~ 97 (719)
T 1z68_A 20 FPNWISGQEYLHQS-ADNNIVLYNIETG-QSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDL 97 (719)
T ss_dssp CCEESSSSEEEEEC-TTSCEEEEESSSC-CEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEET
T ss_pred ccEECCCCeEEEEc-CCCCEEEEEcCCC-cEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEEC
Confidence 67999999766554 6999999998653 23334444443 3899999999999998876 789999999
Q ss_pred CCCcee--eeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeecCCC--C-----------------ceE
Q 019006 130 ETGKQI--KKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDK--Y-----------------QIT 188 (347)
Q Consensus 130 ~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~~~--~-----------------~v~ 188 (347)
.+++.+ ..+ ...+..+.++|++..+ +.+ .++.|++||+.++...+..... . ...
T Consensus 98 ~~g~~~~~~~l---~~~~~~~~~SPDG~~l-a~~-~~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~ 172 (719)
T 1z68_A 98 SNGEFVRGNEL---PRPIQYLCWSPVGSKL-AYV-YQNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKY 172 (719)
T ss_dssp TTTEECCSSCC---CSSBCCEEECSSTTCE-EEE-ETTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSC
T ss_pred CCCccccceec---CcccccceECCCCCEE-EEE-ECCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcc
Confidence 988752 222 2346677888887654 444 3789999999877655432211 1 114
Q ss_pred EEEEcCCCCeEEEEecCC----------------------------------cEEEEeCCCCceE--EE------ecCCC
Q 019006 189 AVSFSDASDKIYTGGIDN----------------------------------DVKVWDLRKGEVS--MT------LQGHQ 226 (347)
Q Consensus 189 ~~~~~~~~~~l~~~~~dg----------------------------------~i~iwd~~~~~~~--~~------~~~~~ 226 (347)
+++|+|+++.|+.++.|. .|++||+.+++.. .. +.+|.
T Consensus 173 ~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~ 252 (719)
T 1z68_A 173 ALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSD 252 (719)
T ss_dssp CEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSC
T ss_pred cEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCc
Confidence 899999999999887652 7889999887642 12 33577
Q ss_pred CceeEEEECCCCCEEEEEcCC----CcEEEEe----CCCCCCcCceeEEE----eccccccccceE-----EEEECCCCC
Q 019006 227 DMITGMSLSPDGSYLLTNGMD----CKLCIWD----MRPYAPQNRCVKIL----EGHQHNFEKNLL-----KCGWSPDGS 289 (347)
Q Consensus 227 ~~i~~v~~~~~~~~l~t~~~d----~~i~~wd----~~~~~~~~~~~~~~----~~~~~~~~~~~~-----~~~~s~~g~ 289 (347)
..+..++|+||++.+++.... ..|.+|| ..... +...+ ..+. ..+. .+.|+|||+
T Consensus 253 ~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~----~~~~~~~~~~~~~----~~~~~~~~~~~~~spdg~ 324 (719)
T 1z68_A 253 YYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWD----CPKTQEHIEESRT----GWAGGFFVSTPVFSYDAI 324 (719)
T ss_dssp EEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEE----CCGGGEEEEECSS----SCSSSSSCCCCEECTTSS
T ss_pred ceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCc----eEEEEecccccCC----ceEccccCCccEECCCCC
Confidence 789999999998777764322 2488888 54322 11112 1221 1222 567999999
Q ss_pred EEEE--eeCCC--eEEEEeCCCceeeEEecCCccCeeeEEEcCCCCEEEEecCC-----CcEEeec
Q 019006 290 KVTA--GSSDR--MVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSD-----KQIYLGE 346 (347)
Q Consensus 290 ~l~s--gs~dg--~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D-----~~i~i~~ 346 (347)
.|+. +..+| .|++||+.+++ ...+..+...+..+.+. +++.|+..+.+ +.+++|.
T Consensus 325 ~l~~~~~~~~g~~~l~~~~~~~~~-~~~lt~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~ 388 (719)
T 1z68_A 325 SYYKIFSDKDGYKHIHYIKDTVEN-AIQITSGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYR 388 (719)
T ss_dssp CEEEEEECTTSCEEEEEESSCSTT-CEECSCSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEE
T ss_pred eEEEEEEccCCceEEEEEECCCCc-eEecccCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEE
Confidence 6654 44555 57888887766 45677677778887777 77766666554 7788775
No 160
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.88 E-value=1.8e-21 Score=175.31 Aligned_cols=210 Identities=13% Similarity=0.119 Sum_probs=150.3
Q ss_pred cceeEEEEcCCCCEEEEecCCCeEEEEECCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceee
Q 019006 101 NAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQT 180 (347)
Q Consensus 101 ~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~ 180 (347)
..+..+++++++.++++++.|+ +++|+...... .... .. ....+... .....
T Consensus 37 ~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~---~~~~----------~~-----------~~~~~~~~---~~~~~ 88 (434)
T 2oit_A 37 ERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLI---QNKP----------GD-----------DPNKIVDK---VQGLL 88 (434)
T ss_dssp SCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCC---CCCT----------TC-----------CTTCEEEC---CCCEE
T ss_pred CCccEEEEecCCCEEEEECCCE-EEEEEchHhhh---hccc----------cc-----------Cccccccc---Ccccc
Confidence 4578899999999999999888 88887532110 0000 00 00001111 11122
Q ss_pred cCCCCceEEEEEcCCCCeEE----EEecCCcEEEEeCCCC--------c---eEEEecCCCCceeEEEECCC-CCEEEEE
Q 019006 181 FPDKYQITAVSFSDASDKIY----TGGIDNDVKVWDLRKG--------E---VSMTLQGHQDMITGMSLSPD-GSYLLTN 244 (347)
Q Consensus 181 ~~~~~~v~~~~~~~~~~~l~----~~~~dg~i~iwd~~~~--------~---~~~~~~~~~~~i~~v~~~~~-~~~l~t~ 244 (347)
++....+.+++|+|++++|+ +++.|+.|++||++++ + ....+.+|...|.+++|+|+ +++|+++
T Consensus 89 ~~~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~ 168 (434)
T 2oit_A 89 VPMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVC 168 (434)
T ss_dssp ECCSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEE
T ss_pred ccCCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEE
Confidence 34456799999999999999 7889999999998654 1 13456678999999999998 7899999
Q ss_pred cCCCcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCCceeeEEecCC-------
Q 019006 245 GMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGH------- 317 (347)
Q Consensus 245 ~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~~~~~~h------- 317 (347)
+.||+|++||++.. .......+| ...+.+++|+|+|++|++|+.||.|++||.+ ++....+..|
T Consensus 169 s~Dg~v~iwD~~~~----~~~~~~~~~----~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~ 239 (434)
T 2oit_A 169 LADGSIAVLQVTET----VKVCATLPS----TVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDH 239 (434)
T ss_dssp ETTSCEEEEEESSS----EEEEEEECG----GGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTS
T ss_pred ECCCeEEEEEcCCC----cceeeccCC----CCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCC
Confidence 99999999999853 222223332 3578999999999999999999999999998 5555555444
Q ss_pred ccCeeeEEEcCCCCEEEEec-CCCc------EEeecC
Q 019006 318 TGSVNESVFHATEPVIGSCS-SDKQ------IYLGEI 347 (347)
Q Consensus 318 ~~~v~~~~~~~~~~~l~s~s-~D~~------i~i~~~ 347 (347)
...|.++.|+++..++++.+ .||. +++|++
T Consensus 240 ~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l 276 (434)
T 2oit_A 240 PVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALL 276 (434)
T ss_dssp CEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEEC
T ss_pred ceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEe
Confidence 33899999999988875433 4433 777764
No 161
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.85 E-value=3.7e-20 Score=164.52 Aligned_cols=272 Identities=13% Similarity=0.036 Sum_probs=176.4
Q ss_pred cEEEEEECCCCCeEEEeeCC---CcEEEEeccCCCeeeEEEeCcccce-eEEEEcCCCCEEEEecCCCeEEEEECCCCce
Q 019006 59 AVYTMKFNPAGTVIASGSHD---RDIFLWHVHGDCKNFMVLKGHKNAI-LDLHWTTDGSQIISASPDKTLRAWDVETGKQ 134 (347)
Q Consensus 59 ~V~~v~~~~~~~~l~s~~~d---~~v~~w~~~~~~~~~~~~~~h~~~v-~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~ 134 (347)
.+..++|+|+|+.|+....+ ..|++|++.+. . ...+..+.... ..+.|+|+|++|+.++.++.|++||+.+++.
T Consensus 37 ~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~-~-~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~ 114 (396)
T 3c5m_A 37 YFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQ-Q-AVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEE 114 (396)
T ss_dssp CTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTT-E-EEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCE
T ss_pred eeecCcCCCCCCEEEEEEecCCCceEEEEECCCC-c-EEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCc
Confidence 36678999999988776543 35777887543 2 23333333333 3378999999999999999999999988765
Q ss_pred eeeeeccCcceeE-------------------eecCCCCCCEEEEE----cCCCceEEEeCCCCCceeecCCCCceEEEE
Q 019006 135 IKKMAEHNSFVNS-------------------CCPSRRGPPLVVSG----SDDGTAKLWDMRQRGAIQTFPDKYQITAVS 191 (347)
Q Consensus 135 ~~~~~~~~~~v~~-------------------~~~~~~~~~~~~s~----~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~ 191 (347)
......+...... ..+++++..+++.. ..+..|.+||+.++...........+..+.
T Consensus 115 ~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~ 194 (396)
T 3c5m_A 115 QVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQDTAWLGHPI 194 (396)
T ss_dssp EEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEEESSCEEEEE
T ss_pred EEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeeccCCcccccce
Confidence 4433323322222 12333332222111 355689999998877655555556788999
Q ss_pred EcC-CCCeEEEEecC------CcEEEEeCCCCceEEEecCC--CCceeEEEECCCCCEEEEEcCC-----CcEEEEeCCC
Q 019006 192 FSD-ASDKIYTGGID------NDVKVWDLRKGEVSMTLQGH--QDMITGMSLSPDGSYLLTNGMD-----CKLCIWDMRP 257 (347)
Q Consensus 192 ~~~-~~~~l~~~~~d------g~i~iwd~~~~~~~~~~~~~--~~~i~~v~~~~~~~~l~t~~~d-----~~i~~wd~~~ 257 (347)
|+| ++..++..+.+ ..|.+||+..++.. .+..+ ...+..++|+|+|++|+..+.+ +.|.+||+..
T Consensus 195 ~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~ 273 (396)
T 3c5m_A 195 YRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVR-KIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPET 273 (396)
T ss_dssp EETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCE-ESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTT
T ss_pred ECCCCCCEEEEEecCCCCCCCceEEEEECCCCcee-EeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCC
Confidence 999 77767665443 46889998765433 23223 2257789999999988776543 4499999864
Q ss_pred CCCcCceeEEEeccccccccceEEEEECC-CCCEEEEee----------------CCCeEEEEeCCCceeeEEecCCcc-
Q 019006 258 YAPQNRCVKILEGHQHNFEKNLLKCGWSP-DGSKVTAGS----------------SDRMVYIWDTTSRRILYKLPGHTG- 319 (347)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-~g~~l~sgs----------------~dg~i~vwd~~~~~~~~~~~~h~~- 319 (347)
.. .. .+.... ... ..|+| ||++|++++ .++.|++||+.+++.. ++..|..
T Consensus 274 g~----~~-~l~~~~-----~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~-~l~~~~~~ 341 (396)
T 3c5m_A 274 LE----NE-EVMVMP-----PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQ-KLCKHSTS 341 (396)
T ss_dssp CC----EE-EEEECC-----SEE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCC-EEEECCCC
T ss_pred CC----eE-EeeeCC-----CCC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceE-EccCCCCc
Confidence 32 11 111111 112 78999 999988765 3478999999887753 4555554
Q ss_pred ----------CeeeEEEcCCCCEEEEecC-CCcEEee
Q 019006 320 ----------SVNESVFHATEPVIGSCSS-DKQIYLG 345 (347)
Q Consensus 320 ----------~v~~~~~~~~~~~l~s~s~-D~~i~i~ 345 (347)
.+..++|+|+++.|+.++. ++...||
T Consensus 342 ~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~ 378 (396)
T 3c5m_A 342 WDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIY 378 (396)
T ss_dssp CCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEE
T ss_pred cccccccccCCCCCceEccCCCeEEEEecCCCCceEE
Confidence 2567899999998887764 4554444
No 162
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.84 E-value=3.9e-18 Score=149.89 Aligned_cols=264 Identities=14% Similarity=0.119 Sum_probs=181.0
Q ss_pred EecCccccEEEEEECCCCCeEEEee----------CCCcEEEEeccCCCeeeEEEeC------cccceeEEEEcCCCCEE
Q 019006 52 LLTGHQSAVYTMKFNPAGTVIASGS----------HDRDIFLWHVHGDCKNFMVLKG------HKNAILDLHWTTDGSQI 115 (347)
Q Consensus 52 ~~~~h~~~V~~v~~~~~~~~l~s~~----------~d~~v~~w~~~~~~~~~~~~~~------h~~~v~~~~~~~~~~~l 115 (347)
.+..+..+ .++|+|+|++|+++. .++.|.+||... .+....+.. +......++++|+|++|
T Consensus 46 ~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t-~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l 122 (361)
T 2oiz_A 46 MVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADK-LTFEKEISLPPKRVQGLNYDGLFRQTTDGKFI 122 (361)
T ss_dssp EEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTT-CCEEEEEEECTTBCCBCCCGGGEEECTTSSEE
T ss_pred EecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcC-CcEEEEEEcCccccccCCCcceEEECCCCCEE
Confidence 44445444 899999999998886 367799999853 233333332 22346778999999999
Q ss_pred EEecC--CCeEEEEECCCCceeee-eeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCC-CCcee------ecCCCC
Q 019006 116 ISASP--DKTLRAWDVETGKQIKK-MAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQ-RGAIQ------TFPDKY 185 (347)
Q Consensus 116 ~s~~~--dg~i~iwd~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~-~~~~~------~~~~~~ 185 (347)
+++.. ++.|.+||+.+++.+.. +..... ..+...+.+...+++.+.||++.+|+... ++... .+....
T Consensus 123 ~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~~--~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~ 200 (361)
T 2oiz_A 123 VLQNASPATSIGIVDVAKGDYVEDVTAAAGC--WSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKD 200 (361)
T ss_dssp EEEEESSSEEEEEEETTTTEEEEEEGGGTTE--EEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTT
T ss_pred EEECCCCCCeEEEEECCCCcEEEEEecCCCc--ceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCC
Confidence 98864 58999999999887766 433221 11234455556788889999999999865 33221 111111
Q ss_pred ceEEEEEcCCCCeEEEEecCCcEEEEeCCCCceE--EEec--C----C----CCceeEEEECCCCCEEEEEcC-------
Q 019006 186 QITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVS--MTLQ--G----H----QDMITGMSLSPDGSYLLTNGM------- 246 (347)
Q Consensus 186 ~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~--~~~~--~----~----~~~i~~v~~~~~~~~l~t~~~------- 246 (347)
....+.+++++..++..+.++.|+++|+...... ..+. . + ......++|+|+++.++++..
T Consensus 201 ~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~ 280 (361)
T 2oiz_A 201 DPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGT 280 (361)
T ss_dssp SCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTC
T ss_pred CceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCccc
Confidence 1112233556677777778899999998754322 1111 0 0 011123789999888776542
Q ss_pred ----CCcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCCc--eeeEEecCCccC
Q 019006 247 ----DCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSR--RILYKLPGHTGS 320 (347)
Q Consensus 247 ----d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~--~~~~~~~~h~~~ 320 (347)
.+.|.+||+.. .+.+..+..+ . ...++|+|||++|++++. +.|.+||..++ +++.++..+...
T Consensus 281 ~~~~~~~v~viD~~t----~~~v~~i~~~-----~-p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~~~G~~ 349 (361)
T 2oiz_A 281 HKFPAAEIWVMDTKT----KQRVARIPGR-----D-ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTIEGAAEA 349 (361)
T ss_dssp TTCCCSEEEEEETTT----TEEEEEEECT-----T-CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEEETTSCSS
T ss_pred ccCCCceEEEEECCC----CcEEEEEecC-----C-eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEEeccCCCC
Confidence 34899999874 3445555543 2 778899999999998887 99999999999 999998778888
Q ss_pred eeeEEEcCCCC
Q 019006 321 VNESVFHATEP 331 (347)
Q Consensus 321 v~~~~~~~~~~ 331 (347)
...++++|++.
T Consensus 350 P~~~~~~p~G~ 360 (361)
T 2oiz_A 350 SLQVQFHPVGG 360 (361)
T ss_dssp EEEEEECCCSC
T ss_pred cEEEEecCCCC
Confidence 89999999975
No 163
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.84 E-value=3.9e-19 Score=168.84 Aligned_cols=284 Identities=11% Similarity=0.024 Sum_probs=191.5
Q ss_pred EecCccccEEEEEECCCCCeEEEe--eCCCcEEEEeccCCCeeeEEEeCccccee---------EEEEc--CCCCE-EEE
Q 019006 52 LLTGHQSAVYTMKFNPAGTVIASG--SHDRDIFLWHVHGDCKNFMVLKGHKNAIL---------DLHWT--TDGSQ-IIS 117 (347)
Q Consensus 52 ~~~~h~~~V~~v~~~~~~~~l~s~--~~d~~v~~w~~~~~~~~~~~~~~h~~~v~---------~~~~~--~~~~~-l~s 117 (347)
.+.+|...+..++|++++-.+++. +.++...||..... .....+..|...+. ...|+ |||++ |+.
T Consensus 18 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~ 96 (662)
T 3azo_A 18 LVASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRAD-GAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVF 96 (662)
T ss_dssp HHHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTT-SCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEE
T ss_pred HHhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCC-CCcceeCCCCccccccccccCCccceeeeecCCCeEEEE
Confidence 466899999999999887777777 66888999986322 33445666665555 56666 99998 776
Q ss_pred ecC-CCeEEEEECC--C-Cceeeeeec-----cCcceeEeecCCCCCCEEEEEcCC----------CceEEEeCCC----
Q 019006 118 ASP-DKTLRAWDVE--T-GKQIKKMAE-----HNSFVNSCCPSRRGPPLVVSGSDD----------GTAKLWDMRQ---- 174 (347)
Q Consensus 118 ~~~-dg~i~iwd~~--~-~~~~~~~~~-----~~~~v~~~~~~~~~~~~~~s~~~d----------~~i~iwd~~~---- 174 (347)
++. +..|.++++. . +. ...+.. +...+...++++++. .+++++.+ ..|++||+.+
T Consensus 97 ~~~~~~~l~~~~~~~~g~~~-~~~l~~~~~~~~~~~~~~~~~spDg~-~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 174 (662)
T 3azo_A 97 THFGDQRLYAFEPDAPGGAV-PRPLTPVSAVGGGLRWADPVLLPERG-EVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAA 174 (662)
T ss_dssp EBTTTCCEEEECTTSTTCCC-CEECSCCCCSTTCEEEEEEEEETTTT-EEEEEEEEECSSSTTCEEEEEEEEETTSTTTT
T ss_pred EECCCCeEEEEcCCCCCCCC-CEeccCCccCCCCccccCcEECCCCC-EEEEEEecccCCCCCCceeEEEEEECCCCccc
Confidence 543 5667777765 2 33 344444 455666788888775 55555555 5899999987
Q ss_pred --CCceeec-CCCCceEEEEEcCCCCeEEEEecCC--------cEEEEeCC-CC---ceEEEecCCCCceeEEEECCCCC
Q 019006 175 --RGAIQTF-PDKYQITAVSFSDASDKIYTGGIDN--------DVKVWDLR-KG---EVSMTLQGHQDMITGMSLSPDGS 239 (347)
Q Consensus 175 --~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg--------~i~iwd~~-~~---~~~~~~~~~~~~i~~v~~~~~~~ 239 (347)
+...... .+...+..++|+|+++.|+.++.++ .|++||+. ++ +......+|...+..+.|+|+|+
T Consensus 175 ~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~ 254 (662)
T 3azo_A 175 DRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGS 254 (662)
T ss_dssp CGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSC
T ss_pred cCCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCe
Confidence 4444444 4455678889999999998777553 79999998 56 43333444567789999999999
Q ss_pred EEEEEcCCC--cEEEEeCCCCCCcCceeEEEecccccc-----ccceEEEEECCCCCEEEEeeCCCeEEEE--eCCCcee
Q 019006 240 YLLTNGMDC--KLCIWDMRPYAPQNRCVKILEGHQHNF-----EKNLLKCGWSPDGSKVTAGSSDRMVYIW--DTTSRRI 310 (347)
Q Consensus 240 ~l~t~~~d~--~i~~wd~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~s~~g~~l~sgs~dg~i~vw--d~~~~~~ 310 (347)
++++++.++ .|.+||+... ........+ ... .-.+..++|+|+++++++++. +.++|| |..+++
T Consensus 255 l~~~~~~~~~~~l~~~~~~~~----~~~~l~~~~-~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~- 327 (662)
T 3azo_A 255 LIVATDRTGWWNLHRVDPATG----AATQLCRRE-EEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGE- 327 (662)
T ss_dssp EEEEECTTSSCEEEEECTTTC----CEEESSCCS-SBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTE-
T ss_pred EEEEECCCCCeEEEEEECCCC----ceeeccccc-ccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCc-
Confidence 888888888 5555665321 222222211 111 011456789999999999998 998888 666565
Q ss_pred eEEecCCccCeeeE-EEcCCCCEEEEecCCCcEEee
Q 019006 311 LYKLPGHTGSVNES-VFHATEPVIGSCSSDKQIYLG 345 (347)
Q Consensus 311 ~~~~~~h~~~v~~~-~~~~~~~~l~s~s~D~~i~i~ 345 (347)
+.++..|.+.+..+ +++.+.-.+++++.+....||
T Consensus 328 ~~~l~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~ 363 (662)
T 3azo_A 328 LVDAAGPWTEWAATLTVSGTRAVGVAASPRTAYEVV 363 (662)
T ss_dssp EEECCSSCCEEEEEEEEETTEEEEEEEETTEEEEEE
T ss_pred EEEecCCCCeEEEEEecCCCEEEEEEcCCCCCCEEE
Confidence 67888888888877 665554455556666443333
No 164
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.83 E-value=4.9e-19 Score=170.26 Aligned_cols=273 Identities=11% Similarity=0.031 Sum_probs=177.9
Q ss_pred ccEEEEEECCCCCeEEEeeCCCcEEEEeccCCCeeeEEEeCcccc-----eeEEEEcCCCCEEEEecCC---------Ce
Q 019006 58 SAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNA-----ILDLHWTTDGSQIISASPD---------KT 123 (347)
Q Consensus 58 ~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~~-----v~~~~~~~~~~~l~s~~~d---------g~ 123 (347)
.....++|+|+|++|+++ |++|++|++.+.. ....+.+|... ..++.|||||++|+.++.+ +.
T Consensus 17 ~~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~ 93 (740)
T 4a5s_A 17 LKLYSLRWISDHEYLYKQ--ENNILVFNAEYGN-SSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTAS 93 (740)
T ss_dssp CCCCCEEECSSSEEEEEE--TTEEEEEETTTCC-EEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEE
T ss_pred ccccccEECCCCcEEEEc--CCcEEEEECCCCc-eEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceE
Confidence 345688999999999886 9999999986443 33456666543 2447899999999998876 56
Q ss_pred EEEEECCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeecCCC--Cce--------------
Q 019006 124 LRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDK--YQI-------------- 187 (347)
Q Consensus 124 i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~~~--~~v-------------- 187 (347)
+.+||+.+++.. .+..+...+....++|++..++ .+ .++.|++||+.++...+..... ..+
T Consensus 94 ~~~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la-~~-~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~ 170 (740)
T 4a5s_A 94 YDIYDLNKRQLI-TEERIPNNTQWVTWSPVGHKLA-YV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVF 170 (740)
T ss_dssp EEEEETTTTEEC-CSSCCCTTEEEEEECSSTTCEE-EE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTS
T ss_pred EEEEECCCCcEE-EcccCCCcceeeEECCCCCEEE-EE-ECCeEEEEECCCCceEEEcCCCCccceecCcccccccchhc
Confidence 679999988753 4555667788889999887654 44 4689999999877654422211 111
Q ss_pred ---EEEEEcCCCCeEEEEecCC------------------------------------cEEEEeCCC---Cc--eEEEec
Q 019006 188 ---TAVSFSDASDKIYTGGIDN------------------------------------DVKVWDLRK---GE--VSMTLQ 223 (347)
Q Consensus 188 ---~~~~~~~~~~~l~~~~~dg------------------------------------~i~iwd~~~---~~--~~~~~~ 223 (347)
..+.|+|||+.|+.++.|. .|++||+.+ ++ ....+.
T Consensus 171 ~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~ 250 (740)
T 4a5s_A 171 SAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQIT 250 (740)
T ss_dssp SSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEEC
T ss_pred CCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEec
Confidence 3488999999998765321 488899987 63 233343
Q ss_pred ------CCCCceeEEEECCCCCEEEEEc----CCCcEEEEeCCCCCCcCcee--EEE--eccccccc-cceEEEEECCCC
Q 019006 224 ------GHQDMITGMSLSPDGSYLLTNG----MDCKLCIWDMRPYAPQNRCV--KIL--EGHQHNFE-KNLLKCGWSPDG 288 (347)
Q Consensus 224 ------~~~~~i~~v~~~~~~~~l~t~~----~d~~i~~wd~~~~~~~~~~~--~~~--~~~~~~~~-~~~~~~~~s~~g 288 (347)
+|...+..++|+|||+.++... .+..|.+||+........|. ..+ ..+..-.. .......|+|||
T Consensus 251 ~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG 330 (740)
T 4a5s_A 251 APASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDG 330 (740)
T ss_dssp CCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTS
T ss_pred CCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCC
Confidence 3677899999999999666543 33479999987543100011 111 22211111 002356799999
Q ss_pred CEEE-EeeC-C--CeEEEEeCCCceeeEEecCCccCeeeEEEcCCCCEE-EEecC
Q 019006 289 SKVT-AGSS-D--RMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVI-GSCSS 338 (347)
Q Consensus 289 ~~l~-sgs~-d--g~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~s~s~ 338 (347)
+.|+ ..+. + ..|++||...++.. ++....-.+..+.. ++++.| .++..
T Consensus 331 ~~l~~~~s~~~G~~~l~~~~~~~~~~~-~lT~g~~~v~~~~~-~d~~~i~f~~~~ 383 (740)
T 4a5s_A 331 NSFYKIISNEEGYRHICYFQIDKKDCT-FITKGTWEVIGIEA-LTSDYLYYISNE 383 (740)
T ss_dssp SEEEEEEECTTSCEEEEEEETTCSSCE-ESCCSSSCEEEEEE-ECSSEEEEEESC
T ss_pred CEEEEEEEcCCCceEEEEEECCCCceE-ecccCCEEEEEEEE-EeCCEEEEEEec
Confidence 9887 6653 3 45888998876654 55544555655442 334444 44443
No 165
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.83 E-value=2.1e-17 Score=140.45 Aligned_cols=238 Identities=12% Similarity=0.224 Sum_probs=172.4
Q ss_pred CcccceeEEEEcCCCCEEEEecCCCeEEEEECCCCceeeeeec------cCcceeEeecCCCCCCEEEEEcC-CCceEEE
Q 019006 98 GHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAE------HNSFVNSCCPSRRGPPLVVSGSD-DGTAKLW 170 (347)
Q Consensus 98 ~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~------~~~~v~~~~~~~~~~~~~~s~~~-d~~i~iw 170 (347)
++-....+++++++++.+++...++.|.+||.. ++.+..+.. +...+..+++...+..++++... ++.|.+|
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~ 105 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIY 105 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEE
T ss_pred CccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEE
Confidence 445568899999999988888889999999977 555555432 12345556663334456665533 7899999
Q ss_pred eCCCCCceeecCC--CCceEEEEEcCCCCeEEEEecCCcEEEEeCCCCceEEEec--CCCCceeEEEECCCCCEEEEEcC
Q 019006 171 DMRQRGAIQTFPD--KYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQ--GHQDMITGMSLSPDGSYLLTNGM 246 (347)
Q Consensus 171 d~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~--~~~~~i~~v~~~~~~~~l~t~~~ 246 (347)
| ..+..+..+.. ...+..++++++++.+++...++.|++||.. ++....+. .+...+..++++++++.+++...
T Consensus 106 d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~ 183 (286)
T 1q7f_A 106 N-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNR 183 (286)
T ss_dssp C-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGG
T ss_pred C-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEEEECC
Confidence 9 45555555532 3468899999999877777778899999964 55555543 34456899999999998888888
Q ss_pred CCcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEEEEeeCCC-eEEEEeCCCceeeEEecCCcc--Ceee
Q 019006 247 DCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDR-MVYIWDTTSRRILYKLPGHTG--SVNE 323 (347)
Q Consensus 247 d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg-~i~vwd~~~~~~~~~~~~h~~--~v~~ 323 (347)
++.|.+||... ..+..+.... ....+..++++++|.++++...++ .|++||. .++.+..+..+.. .+..
T Consensus 184 ~~~i~~~~~~g-----~~~~~~~~~g--~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~ 255 (286)
T 1q7f_A 184 AHCVKVFNYEG-----QYLRQIGGEG--ITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFD 255 (286)
T ss_dssp GTEEEEEETTC-----CEEEEESCTT--TSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEE
T ss_pred CCEEEEEcCCC-----CEEEEEccCC--ccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCccee
Confidence 89999999642 2333333221 113577899999999999888886 9999996 4566666655543 4779
Q ss_pred EEEcCCCCEEEEecCCCcEEeecC
Q 019006 324 SVFHATEPVIGSCSSDKQIYLGEI 347 (347)
Q Consensus 324 ~~~~~~~~~l~s~s~D~~i~i~~~ 347 (347)
++++|++.++++ +.|+.|++|++
T Consensus 256 i~~~~~g~l~vs-~~~~~v~v~~~ 278 (286)
T 1q7f_A 256 VALMDDGSVVLA-SKDYRLYIYRY 278 (286)
T ss_dssp EEEETTTEEEEE-ETTTEEEEEEC
T ss_pred EEECCCCcEEEE-CCCCeEEEEEc
Confidence 999999998888 57999999975
No 166
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.83 E-value=2.2e-18 Score=151.88 Aligned_cols=244 Identities=10% Similarity=0.031 Sum_probs=164.1
Q ss_pred ccccEEEEEECCCCCeEEEeeCCCcEEEEeccCCCeeeEEE--eCcccceeEEEEcCCCCE--EEEec------------
Q 019006 56 HQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVL--KGHKNAILDLHWTTDGSQ--IISAS------------ 119 (347)
Q Consensus 56 h~~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~--~~h~~~v~~~~~~~~~~~--l~s~~------------ 119 (347)
+...+..++|+|+|++|++++.+ .|.+|++.......... ..+ .....++|+|+|++ ++++.
T Consensus 38 ~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~-g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~ 115 (365)
T 1jof_A 38 QDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIG-GHPRANDADTNTRAIFLLAAKQPPYAVYANPFY 115 (365)
T ss_dssp TTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECC-SSGGGGCTTSCCEEEEEEECSSTTCCEEEEEES
T ss_pred CCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecC-CCCccEEECCCCCEEEEEEecCCcceeccceee
Confidence 33467789999999999999888 99999985122222111 111 23556889999994 55554
Q ss_pred -CCCeEEEEECC-CCceeeeee----ccCcceeEeecCCCCCCEEEEEcCCCceEEEeCC-CCCce--eecC---CCCce
Q 019006 120 -PDKTLRAWDVE-TGKQIKKMA----EHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMR-QRGAI--QTFP---DKYQI 187 (347)
Q Consensus 120 -~dg~i~iwd~~-~~~~~~~~~----~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~-~~~~~--~~~~---~~~~v 187 (347)
.+|.+.+|++. +++....+. .+...+..+.+++++..++++...++.|.+||+. +++.. ..+. +...+
T Consensus 116 ~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p 195 (365)
T 1jof_A 116 KFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHP 195 (365)
T ss_dssp SSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCE
T ss_pred cCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCC
Confidence 68999999997 455443333 1345677788888876554444457899999997 55532 2222 24568
Q ss_pred EEEEEcCCCCeEEEEec-CCcEEEEeCC--CCceEE---Ee---c----CCCC------ceeEEE-ECCCCCEEEEEcCC
Q 019006 188 TAVSFSDASDKIYTGGI-DNDVKVWDLR--KGEVSM---TL---Q----GHQD------MITGMS-LSPDGSYLLTNGMD 247 (347)
Q Consensus 188 ~~~~~~~~~~~l~~~~~-dg~i~iwd~~--~~~~~~---~~---~----~~~~------~i~~v~-~~~~~~~l~t~~~d 247 (347)
..++|+|+++++++++. ++.|.+|++. +++... .+ . +|.. .+..++ |+|+|++|++++.+
T Consensus 196 ~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~ 275 (365)
T 1jof_A 196 RWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRA 275 (365)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEE
T ss_pred CEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCC
Confidence 89999999999888775 6889999765 454321 12 1 1222 478899 99999998876543
Q ss_pred C------cEEEEeCCCCCCcCceeE---EEeccccccccceEEEEECC---CCCEEEEeeCC-CeEEEEeCCCc
Q 019006 248 C------KLCIWDMRPYAPQNRCVK---ILEGHQHNFEKNLLKCGWSP---DGSKVTAGSSD-RMVYIWDTTSR 308 (347)
Q Consensus 248 ~------~i~~wd~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~s~---~g~~l~sgs~d-g~i~vwd~~~~ 308 (347)
. .|.+|++.. .+.... ....+. .....++|+| ||++|++++.+ +.|.+|+....
T Consensus 276 ~~~~~~~~i~v~~~~~---~g~~~~~~~~~~~~~----~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 276 NKFELQGYIAGFKLRD---CGSIEKQLFLSPTPT----SGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp SSTTSCCEEEEEEECT---TSCEEEEEEEEECSS----CCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred CCCCCCCeEEEEEECC---CCCEEEeeeeeecCC----CCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 2 899999863 122221 122111 1234567899 89999998864 89999998765
No 167
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.82 E-value=9e-17 Score=136.48 Aligned_cols=240 Identities=15% Similarity=0.259 Sum_probs=173.1
Q ss_pred CccccEEEEEECCCCCeEEEeeCCCcEEEEeccCCCeeeEEEe------CcccceeEEEE-cCCCCEEEEecC-CCeEEE
Q 019006 55 GHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLK------GHKNAILDLHW-TTDGSQIISASP-DKTLRA 126 (347)
Q Consensus 55 ~h~~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~------~h~~~v~~~~~-~~~~~~l~s~~~-dg~i~i 126 (347)
+|-..+.++++++++.++++...++.|.+|+..+. ....+. +|...+..+++ .+++..+++... ++.|++
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g~--~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~ 104 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGR--FKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQI 104 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEEGGGTEEEEECTTSC--EEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEE
T ss_pred CccCCCceEEECCCCCEEEEECCCCEEEEECCCCc--EEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEE
Confidence 56678999999999999998889999999998643 233332 24457889999 467766666543 899999
Q ss_pred EECCCCceeeeeec-cCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeecC---CCCceEEEEEcCCCCeEEEE
Q 019006 127 WDVETGKQIKKMAE-HNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFP---DKYQITAVSFSDASDKIYTG 202 (347)
Q Consensus 127 wd~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~ 202 (347)
|| .+++.+..+.. +...+..+++.+.+ .++++...++.|.+||.. +..+..+. ....+..++++++++.+++.
T Consensus 105 ~d-~~g~~~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~ 181 (286)
T 1q7f_A 105 YN-QYGQFVRKFGATILQHPRGVTVDNKG-RIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISD 181 (286)
T ss_dssp EC-TTSCEEEEECTTTCSCEEEEEECTTS-CEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEE
T ss_pred EC-CCCcEEEEecCccCCCceEEEEeCCC-CEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEEEE
Confidence 99 55666655532 23445667777665 577887888999999964 44444442 23468899999998877777
Q ss_pred ecCCcEEEEeCCCCceEEEecCC--CCceeEEEECCCCCEEEEEcCCC-cEEEEeCCCCCCcCceeEEEeccccccccce
Q 019006 203 GIDNDVKVWDLRKGEVSMTLQGH--QDMITGMSLSPDGSYLLTNGMDC-KLCIWDMRPYAPQNRCVKILEGHQHNFEKNL 279 (347)
Q Consensus 203 ~~dg~i~iwd~~~~~~~~~~~~~--~~~i~~v~~~~~~~~l~t~~~d~-~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (347)
..++.|++||.. ++....+..+ ...+..++++++|+.+++...++ .|.+||.. ...+..+..+.. ...+
T Consensus 182 ~~~~~i~~~~~~-g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~-----g~~~~~~~~~~~--~~~~ 253 (286)
T 1q7f_A 182 NRAHCVKVFNYE-GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQD-----GQLISALESKVK--HAQC 253 (286)
T ss_dssp GGGTEEEEEETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTT-----SCEEEEEEESSC--CSCE
T ss_pred CCCCEEEEEcCC-CCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCC-----CCEEEEEcccCC--CCcc
Confidence 788999999974 5555555433 35688999999999888887776 99999953 233444433221 1246
Q ss_pred EEEEECCCCCEEEEeeCCCeEEEEeCCCc
Q 019006 280 LKCGWSPDGSKVTAGSSDRMVYIWDTTSR 308 (347)
Q Consensus 280 ~~~~~s~~g~~l~sgs~dg~i~vwd~~~~ 308 (347)
..++++|+|+++++ +.|+.|++|++...
T Consensus 254 ~~i~~~~~g~l~vs-~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 254 FDVALMDDGSVVLA-SKDYRLYIYRYVQL 281 (286)
T ss_dssp EEEEEETTTEEEEE-ETTTEEEEEECSCC
T ss_pred eeEEECCCCcEEEE-CCCCeEEEEEcccc
Confidence 78999999987777 57999999987654
No 168
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.82 E-value=1e-17 Score=146.00 Aligned_cols=242 Identities=12% Similarity=0.122 Sum_probs=157.3
Q ss_pred cEEEEEECCCCCeE-EEeeCCCcEEEEeccCCCeeeEEEeC-c-----ccceeEEEEcCCCCEEEEecCC----------
Q 019006 59 AVYTMKFNPAGTVI-ASGSHDRDIFLWHVHGDCKNFMVLKG-H-----KNAILDLHWTTDGSQIISASPD---------- 121 (347)
Q Consensus 59 ~V~~v~~~~~~~~l-~s~~~d~~v~~w~~~~~~~~~~~~~~-h-----~~~v~~~~~~~~~~~l~s~~~d---------- 121 (347)
.+..++|+|+|+.+ +++..++.|++|++.+. +....+.. + ...+..++|+|+|++|++++.+
T Consensus 44 ~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~-~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~ 122 (349)
T 1jmx_B 44 GPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTC-KNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVV 122 (349)
T ss_dssp SSCEEEECTTSSEEEEEETTTTEEEEEETTTT-EEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEE
T ss_pred CCceeEECCCCCEEEEEeCCCCcEEEEeCCCC-cEEEEEEcccccccccccccceEECCCCCEEEEEccccccccccccc
Confidence 57789999999865 55667899999998643 33333332 2 2337889999999999998865
Q ss_pred --CeEEEEECCCCcee---eeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeecCCCC-----------
Q 019006 122 --KTLRAWDVETGKQI---KKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKY----------- 185 (347)
Q Consensus 122 --g~i~iwd~~~~~~~---~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~~~~----------- 185 (347)
+.|.+||+.+++.. ..+. +...+..+++++++. +++ ++ +.|.+||+.+++.+..++...
T Consensus 123 ~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~-l~~-~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (349)
T 1jmx_B 123 KPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADDGS-LYV-AG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDV 197 (349)
T ss_dssp CCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTTSC-EEE-ES--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBC
T ss_pred CCCeEEEEECCCccccceeeecc-CCCcccceeECCCCc-EEE-cc--CcEEEEeCCCCceeccccccccCCccccCccc
Confidence 89999999875432 2222 333455666777765 554 43 349999998887766554321
Q ss_pred --------------ceEEEEEcCCCCeEEEEecCC-cEEEEeCCCCceE-EEecCCCCceeEEEECC-CCCEEEEEcCCC
Q 019006 186 --------------QITAVSFSDASDKIYTGGIDN-DVKVWDLRKGEVS-MTLQGHQDMITGMSLSP-DGSYLLTNGMDC 248 (347)
Q Consensus 186 --------------~v~~~~~~~~~~~l~~~~~dg-~i~iwd~~~~~~~-~~~~~~~~~i~~v~~~~-~~~~l~t~~~d~ 248 (347)
....+.+++++.......... .+..+|..+++.. ..+..+...+.+++|+| ++++++++ ++
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~ 275 (349)
T 1jmx_B 198 LYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LN 275 (349)
T ss_dssp CCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ES
T ss_pred eeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cC
Confidence 234455554432110000000 1122444433321 11222445688999999 99999988 88
Q ss_pred cEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCCceeeEEecCC
Q 019006 249 KLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGH 317 (347)
Q Consensus 249 ~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~~~~~~h 317 (347)
.|.+||+... +....+... ..+..++|+|+|++|++++.++.|++||..+++.+..++.+
T Consensus 276 ~v~~~d~~~~----~~~~~~~~~-----~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~~~~~~~~~ 335 (349)
T 1jmx_B 276 RLAKYDLKQR----KLIKAANLD-----HTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKLP 335 (349)
T ss_dssp EEEEEETTTT----EEEEEEECS-----SCCCEEEECSSSSCEEEESBSSEEEEEETTTTEEEEEEECS
T ss_pred eEEEEECccC----eEEEEEcCC-----CCccceEECCCCCEEEEecCCCeEEEEeccccceeeeeecC
Confidence 9999998742 333333321 23568899999999998888999999999999988877654
No 169
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.82 E-value=1.2e-17 Score=146.70 Aligned_cols=261 Identities=11% Similarity=0.107 Sum_probs=178.1
Q ss_pred CCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEec----------CCCeEEEEECCCCceeeeeecc-----
Q 019006 77 HDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISAS----------PDKTLRAWDVETGKQIKKMAEH----- 141 (347)
Q Consensus 77 ~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~----------~dg~i~iwd~~~~~~~~~~~~~----- 141 (347)
.|+.|++||.... +....+..+..+ .++|+|++++++++. .++.|.+||..+.+.+..+...
T Consensus 29 ~d~~v~v~D~~t~-~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~ 105 (361)
T 2oiz_A 29 TESRVHVYDYTNG-KFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQ 105 (361)
T ss_dssp GGCEEEEEETTTC-CEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCC
T ss_pred ccCeEEEEECCCC-eEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccc
Confidence 4789999997533 344556655555 899999999999886 3678999999988887776532
Q ss_pred -CcceeEeecCCCCCCEEEEEcC-CCceEEEeCCCCCceee-cCCCCceEEEEEcCCC-CeEEEEecCCcEEEEeCCC-C
Q 019006 142 -NSFVNSCCPSRRGPPLVVSGSD-DGTAKLWDMRQRGAIQT-FPDKYQITAVSFSDAS-DKIYTGGIDNDVKVWDLRK-G 216 (347)
Q Consensus 142 -~~~v~~~~~~~~~~~~~~s~~~-d~~i~iwd~~~~~~~~~-~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~~-~ 216 (347)
......+.+++++..++++... +++|.+||+.+++.+.. ++.... ..+.+.|++ ..+++.+.||.+.+|++.. +
T Consensus 106 ~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~~-~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g 184 (361)
T 2oiz_A 106 GLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAGC-WSVIPQPNRPRSFMTICGDGGLLTINLGEDG 184 (361)
T ss_dssp BCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTTE-EEEEECTTSSSEEEEEETTSSEEEEEECTTS
T ss_pred cCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCCc-ceeEEcCCCCeeEEEECCCCcEEEEEECCCC
Confidence 2334456777777554444333 68999999999888777 654332 224566765 5677888999999998865 4
Q ss_pred ceEEE------ecCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEecccc-----c-cccceEEEEE
Q 019006 217 EVSMT------LQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQH-----N-FEKNLLKCGW 284 (347)
Q Consensus 217 ~~~~~------~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~ 284 (347)
+.... +.....++ .+.+++++..++..+.++.+.++|+..... .....+..... . ......-++|
T Consensus 185 ~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~--~~~~~~~~~~~~~~~~~~~p~g~~~~a~ 261 (361)
T 2oiz_A 185 KVASQSRSKQMFSVKDDPI-FIAPALDKDKAHFVSYYGNVYSADFSGDEV--KVDGPWSLLNDEDKAKNWVPGGYNLVGL 261 (361)
T ss_dssp SEEEEEECCCCSCTTTSCB-CSCCEECSSEEEEEBTTSEEEEEECSSSSC--EEEEEEESCCHHHHHTTCEECCSSCEEE
T ss_pred cEeeeccccceEcCCCCce-EEEecccCCEEEEEeCCCeEEEEEecCCCc--eecccccccCccccccccccCCeeEEEE
Confidence 44311 11122222 233456777777778889999999864221 11111111000 0 0011112578
Q ss_pred CCCCCEEEEeeC-----------CCeEEEEeCCCceeeEEecCCccCeeeEEEcCCCCEEEEecCCCcEEeecC
Q 019006 285 SPDGSKVTAGSS-----------DRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGEI 347 (347)
Q Consensus 285 s~~g~~l~sgs~-----------dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~i~~~ 347 (347)
+|+++.++++.. ++.|.+||+.+++.+.+++.+. +..++|+|++++|++++. ++|.+||.
T Consensus 262 ~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~ 332 (361)
T 2oiz_A 262 HRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDI 332 (361)
T ss_dssp ETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEEC
T ss_pred ecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEEC
Confidence 999988877543 3589999999999999999887 999999999999988887 99999984
No 170
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.82 E-value=3e-19 Score=171.30 Aligned_cols=239 Identities=15% Similarity=0.122 Sum_probs=161.5
Q ss_pred eEEEEcCCCCEEEEecCCCeEEEEECCCCceeeeeeccCc---ceeEeecCCCCCCEEEEEcC---------CCceEEEe
Q 019006 104 LDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNS---FVNSCCPSRRGPPLVVSGSD---------DGTAKLWD 171 (347)
Q Consensus 104 ~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~---~v~~~~~~~~~~~~~~s~~~---------d~~i~iwd 171 (347)
.+++|+|++++++ .+.|+.|++||+.+++....+..+.. .+....+++++. .+++++. ++.|++||
T Consensus 19 ~~~~~s~dg~~~~-~~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~-~la~~~~~~~~~~~s~~~~i~~~d 96 (719)
T 1z68_A 19 FFPNWISGQEYLH-QSADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQ-FVYLESDYSKLWRYSYTATYYIYD 96 (719)
T ss_dssp CCCEESSSSEEEE-ECTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSS-EEEEEEEEEECSSSCEEEEEEEEE
T ss_pred CccEECCCCeEEE-EcCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCC-eEEEEecCceeEEeecceEEEEEE
Confidence 3678999996555 45699999999999887655544432 267788888775 5555554 68999999
Q ss_pred CCCCCceeecCCCCceEEEEEcCCCCeEEEEecCCcEEEEeCCCCceEEEe-cCCCCce-----------------eEEE
Q 019006 172 MRQRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTL-QGHQDMI-----------------TGMS 233 (347)
Q Consensus 172 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~~i-----------------~~v~ 233 (347)
+.+++.+........+..++|+|+|+.|+.+. ++.|++||+.+++..... .++...| .+++
T Consensus 97 ~~~g~~~~~~~l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~ 175 (719)
T 1z68_A 97 LSNGEFVRGNELPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALW 175 (719)
T ss_dssp TTTTEECCSSCCCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEE
T ss_pred CCCCccccceecCcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEE
Confidence 98876531122234588899999999999875 789999999887654322 2222222 4899
Q ss_pred ECCCCCEEEEEcCCC----------------------------------cEEEEeCCCCCCcCceeEEEe-ccccccccc
Q 019006 234 LSPDGSYLLTNGMDC----------------------------------KLCIWDMRPYAPQNRCVKILE-GHQHNFEKN 278 (347)
Q Consensus 234 ~~~~~~~l~t~~~d~----------------------------------~i~~wd~~~~~~~~~~~~~~~-~~~~~~~~~ 278 (347)
|+|||++|+.++.|. .|++||+....... ...... .........
T Consensus 176 wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~-~~~~~~~~~~~~~~~~ 254 (719)
T 1z68_A 176 WSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVG-PQEVPVPAMIASSDYY 254 (719)
T ss_dssp ECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHC-CEECCCCHHHHTSCEE
T ss_pred ECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccc-eeEccCCccCCCCcce
Confidence 999999999987552 67888876421100 001100 000012346
Q ss_pred eEEEEECCCCCEEEEeeCC----CeEEEEe----CCCceeeEEe----cCCccCee-----eEEEcCCCCEEEE--ecCC
Q 019006 279 LLKCGWSPDGSKVTAGSSD----RMVYIWD----TTSRRILYKL----PGHTGSVN-----ESVFHATEPVIGS--CSSD 339 (347)
Q Consensus 279 ~~~~~~s~~g~~l~sgs~d----g~i~vwd----~~~~~~~~~~----~~h~~~v~-----~~~~~~~~~~l~s--~s~D 339 (347)
+..++|+||++++++.... ..|++|| +.+++....+ .+|.+.+. .++|+|+++.++. ...|
T Consensus 255 ~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~ 334 (719)
T 1z68_A 255 FSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKD 334 (719)
T ss_dssp EEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTT
T ss_pred EEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccC
Confidence 7889999998877774432 3488999 8887766555 47787777 8999999996554 4455
Q ss_pred C--cEEeec
Q 019006 340 K--QIYLGE 346 (347)
Q Consensus 340 ~--~i~i~~ 346 (347)
| .|++++
T Consensus 335 g~~~l~~~~ 343 (719)
T 1z68_A 335 GYKHIHYIK 343 (719)
T ss_dssp SCEEEEEES
T ss_pred CceEEEEEE
Confidence 5 466555
No 171
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.82 E-value=3.3e-17 Score=142.31 Aligned_cols=273 Identities=12% Similarity=0.075 Sum_probs=186.2
Q ss_pred ccEEEEEECCCCCeEEEeeCCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEECCCCceeee
Q 019006 58 SAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKK 137 (347)
Q Consensus 58 ~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 137 (347)
..|.+++|++++..++..+.++.++.|. + .....+..+...+.+++|+++++.++++..++.|.+||..+++....
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~ 81 (333)
T 2dg1_A 6 QDLPTLFYSGKSNSAVPIISESELQTIT--A--EPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRP 81 (333)
T ss_dssp CCCCBCCSCGGGGCSSCCCCGGGSCEEE--C--EEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEE
T ss_pred cccceeeecCCccceeEEeecccCcccc--c--ceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEE
Confidence 3467778888888887778888999982 2 34455667777789999999999888888899999999988765443
Q ss_pred eeccCcceeEeecCCCCCCEEEEEcCC----CceEEEeCCCCCceeecC---CCCceEEEEEcCCCCeEEEEec------
Q 019006 138 MAEHNSFVNSCCPSRRGPPLVVSGSDD----GTAKLWDMRQRGAIQTFP---DKYQITAVSFSDASDKIYTGGI------ 204 (347)
Q Consensus 138 ~~~~~~~v~~~~~~~~~~~~~~s~~~d----~~i~iwd~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~------ 204 (347)
...+...+..+++.+++ .++++...+ +.|.+||..++.....+. ....+..+.++|++..+++...
T Consensus 82 ~~~~~~~~~~i~~~~dg-~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~ 160 (333)
T 2dg1_A 82 FVSHKANPAAIKIHKDG-RLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNP 160 (333)
T ss_dssp EECSSSSEEEEEECTTS-CEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBC
T ss_pred eeCCCCCcceEEECCCC-cEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCC
Confidence 33445567777777665 566666655 689999988766542222 2346889999999877666543
Q ss_pred CCcEEEEeCCCCceEEEecCCCCceeEEEECCCCCEEE-EEcCCCcEEEEeCCCCCCcCcee--EEEeccccccccceEE
Q 019006 205 DNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLL-TNGMDCKLCIWDMRPYAPQNRCV--KILEGHQHNFEKNLLK 281 (347)
Q Consensus 205 dg~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~-t~~~d~~i~~wd~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 281 (347)
.+.|..+|..+++... +..+...+..++|+|++++++ +...++.|.+||+.......... ....... . ...+..
T Consensus 161 ~~~l~~~~~~~~~~~~-~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~-~-~~~~~~ 237 (333)
T 2dg1_A 161 LGGVYYVSPDFRTVTP-IIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFT-G-HEGPDS 237 (333)
T ss_dssp CEEEEEECTTSCCEEE-EEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECC-S-SSEEEE
T ss_pred CceEEEEeCCCCEEEE-eecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecC-C-CCCCCc
Confidence 3567777766544332 222234578899999998654 44567899999985311110000 0000000 0 124667
Q ss_pred EEECCCCCEEEEeeCCCeEEEEeCCCceeeEEecCCcc------CeeeEEEcCCCCEEEEecCC
Q 019006 282 CGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTG------SVNESVFHATEPVIGSCSSD 339 (347)
Q Consensus 282 ~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~------~v~~~~~~~~~~~l~s~s~D 339 (347)
++++++|.++++...++.|++||. .++.+..+..+.. .+..++|+|++..|..++.+
T Consensus 238 i~~d~~G~l~v~~~~~~~v~~~d~-~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 238 CCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp EEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred eEECCCCCEEEEEcCCCEEEEECC-CCCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCc
Confidence 889999998888888899999998 4666666654433 68999999997666544444
No 172
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.81 E-value=6e-17 Score=140.58 Aligned_cols=239 Identities=10% Similarity=0.136 Sum_probs=176.3
Q ss_pred cceeEEEEcCCCCEEEEecCC------------------------CeEEEEECCCCceeeeeec-cCcceeEeecCCCCC
Q 019006 101 NAILDLHWTTDGSQIISASPD------------------------KTLRAWDVETGKQIKKMAE-HNSFVNSCCPSRRGP 155 (347)
Q Consensus 101 ~~v~~~~~~~~~~~l~s~~~d------------------------g~i~iwd~~~~~~~~~~~~-~~~~v~~~~~~~~~~ 155 (347)
..+.+++++++|+.+++...+ +.|.+||..+++.+..+.. +......+++.+.+
T Consensus 24 ~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g- 102 (329)
T 3fvz_A 24 GQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDG- 102 (329)
T ss_dssp SCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTS-
T ss_pred CCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCC-
Confidence 568999999999988888777 4799999988887655532 22345667777665
Q ss_pred CEEEEEcCCCceEEEeCCCCC-ceeecC----------CCCceEEEEEcC-CCCeEEEEe-cCCcEEEEeCCCCceEEEe
Q 019006 156 PLVVSGSDDGTAKLWDMRQRG-AIQTFP----------DKYQITAVSFSD-ASDKIYTGG-IDNDVKVWDLRKGEVSMTL 222 (347)
Q Consensus 156 ~~~~s~~~d~~i~iwd~~~~~-~~~~~~----------~~~~v~~~~~~~-~~~~l~~~~-~dg~i~iwd~~~~~~~~~~ 222 (347)
.++++...+++|+.||..... .+..+. .......++++| ++..+++.+ .++.|++|| ..++....+
T Consensus 103 ~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~ 181 (329)
T 3fvz_A 103 NYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQW 181 (329)
T ss_dssp CEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEE
T ss_pred CEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEe
Confidence 488888889999999986542 333332 123588999999 676666765 689999999 456666655
Q ss_pred cC----------CCCceeEEEECCC-CCEEEEEcCCCcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECC-----
Q 019006 223 QG----------HQDMITGMSLSPD-GSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSP----- 286 (347)
Q Consensus 223 ~~----------~~~~i~~v~~~~~-~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~----- 286 (347)
.. +......++++|+ ++.+++...++.|++||... +..+..+.... ....+..++|+|
T Consensus 182 ~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~----G~~~~~~~~~~--~~~~~~~~~~~pg~~~~ 255 (329)
T 3fvz_A 182 GEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDT----KEFVREIKHAS--FGRNVFAISYIPGFLFA 255 (329)
T ss_dssp CEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTT----CCEEEEECCTT--TTTCEEEEEEETTEEEE
T ss_pred ccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCC----CcEEEEEeccc--cCCCcceeeecCCEEEE
Confidence 32 2234789999998 77777778889999999763 34444443221 224567888888
Q ss_pred -CCCEEEEeeCCCeEEEEeCCCceeeEEe---cCCccCeeeEEEcCCCCEEEEecCCCcEEeecC
Q 019006 287 -DGSKVTAGSSDRMVYIWDTTSRRILYKL---PGHTGSVNESVFHATEPVIGSCSSDKQIYLGEI 347 (347)
Q Consensus 287 -~g~~l~sgs~dg~i~vwd~~~~~~~~~~---~~h~~~v~~~~~~~~~~~l~s~s~D~~i~i~~~ 347 (347)
+|...++.+.+..|++||..+++.+..+ .++...+..++++|++.++++...++.|++|++
T Consensus 256 ~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~ 320 (329)
T 3fvz_A 256 VNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTL 320 (329)
T ss_dssp EECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEE
T ss_pred eCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeC
Confidence 4444444445668999999999998887 467778999999999999999999999999874
No 173
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.81 E-value=5.5e-17 Score=140.81 Aligned_cols=243 Identities=9% Similarity=0.073 Sum_probs=172.4
Q ss_pred cccEEEEEECCCCCeEEEeeCC------------------------CcEEEEeccCCCeeeEEEe-CcccceeEEEEcCC
Q 019006 57 QSAVYTMKFNPAGTVIASGSHD------------------------RDIFLWHVHGDCKNFMVLK-GHKNAILDLHWTTD 111 (347)
Q Consensus 57 ~~~V~~v~~~~~~~~l~s~~~d------------------------~~v~~w~~~~~~~~~~~~~-~h~~~v~~~~~~~~ 111 (347)
-+.|.+|+++|+|+++++...+ +.|++||.... +....+. ++-.....++++++
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g-~~~~~~~~~~~~~p~gia~d~~ 101 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNA-EILQSSGKNLFYLPHGLSIDTD 101 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTC-CEEEEECTTTCSSEEEEEECTT
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCC-eEEeccCCCccCCceEEEECCC
Confidence 3579999999999999988877 47999998532 2222222 34457889999999
Q ss_pred CCEEEEecCCCeEEEEECCCCc-eeeeee---------ccCcceeEeecCCCCCCEEEEEc-CCCceEEEeCCCCCceee
Q 019006 112 GSQIISASPDKTLRAWDVETGK-QIKKMA---------EHNSFVNSCCPSRRGPPLVVSGS-DDGTAKLWDMRQRGAIQT 180 (347)
Q Consensus 112 ~~~l~s~~~dg~i~iwd~~~~~-~~~~~~---------~~~~~v~~~~~~~~~~~~~~s~~-~d~~i~iwd~~~~~~~~~ 180 (347)
|+.+++...++.|++||..... .+..+. .+......+++.+.+..++++.+ .++.|++||. .+..+..
T Consensus 102 g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~-~g~~~~~ 180 (329)
T 3fvz_A 102 GNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSP-SGKFVTQ 180 (329)
T ss_dssp SCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECT-TSCEEEE
T ss_pred CCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcC-CCCEEEE
Confidence 9988888889999999976542 344432 22234566778775567888876 6899999994 4555554
Q ss_pred cCC-----------CCceEEEEEcCC-CCeEEEEecCCcEEEEeCCCCceEEEec--CCCCceeEEEECCCCCEEEEE--
Q 019006 181 FPD-----------KYQITAVSFSDA-SDKIYTGGIDNDVKVWDLRKGEVSMTLQ--GHQDMITGMSLSPDGSYLLTN-- 244 (347)
Q Consensus 181 ~~~-----------~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~--~~~~~i~~v~~~~~~~~l~t~-- 244 (347)
+.. -.....++++|+ +..+++...++.|++||..+++....+. .+...+..++|+| +..+.+.
T Consensus 181 ~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g~~~~~~g~ 259 (329)
T 3fvz_A 181 WGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP-GFLFAVNGK 259 (329)
T ss_dssp ECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET-TEEEEEECC
T ss_pred eccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecC-CEEEEeCCC
Confidence 431 123788999998 5555666778899999998888777763 3456788999999 4333333
Q ss_pred -----cCCCcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCC
Q 019006 245 -----GMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTS 307 (347)
Q Consensus 245 -----~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~ 307 (347)
..+..|++||... ...+..+.... .....+..++++|+|.++++...++.|++|++..
T Consensus 260 ~~v~~~~~~~v~~~~~~~----g~~~~~~~~~~-~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 260 PYFGDQEPVQGFVMNFSS----GEIIDVFKPVR-KHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp CCTTCSCCCCEEEEETTT----CCEEEEECCSS-SCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred EEeccCCCcEEEEEEcCC----CeEEEEEcCCC-CccCCeeEEEECCCCCEEEEECCCCEEEEEeCCc
Confidence 3455899999864 33444442111 1124578899999998888888999999999754
No 174
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.80 E-value=2.2e-18 Score=165.78 Aligned_cols=239 Identities=15% Similarity=0.166 Sum_probs=159.9
Q ss_pred ceeEEEEcCCCCEEEEecCCCeEEEEECCCCceeeeeeccCcce-----eEeecCCCCCCEEEEEcCC---------Cce
Q 019006 102 AILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFV-----NSCCPSRRGPPLVVSGSDD---------GTA 167 (347)
Q Consensus 102 ~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v-----~~~~~~~~~~~~~~s~~~d---------~~i 167 (347)
...++.|+|++.+++++ |+.|++||+.+++....+..+.... ....+++++. .++.++.+ +.+
T Consensus 18 ~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~-~l~~~~~~~~~~r~~~~~~~ 94 (740)
T 4a5s_A 18 KLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQ-FILLEYNYVKQWRHSYTASY 94 (740)
T ss_dssp CCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSS-EEEEEEEEEECSSSCEEEEE
T ss_pred cccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCC-EEEEEECCeeeEEEccceEE
Confidence 45688999999888886 9999999999998766555554322 2245677764 55666655 556
Q ss_pred EEEeCCCCCceeecCCCCceEEEEEcCCCCeEEEEecCCcEEEEeCCCCceEE-EecCCCCce-----------------
Q 019006 168 KLWDMRQRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSM-TLQGHQDMI----------------- 229 (347)
Q Consensus 168 ~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~-~~~~~~~~i----------------- 229 (347)
.+||+.+++......+...+...+|+|+|+.|+.+ .++.|++||+.+++... +..++...+
T Consensus 95 ~~~d~~~~~~~~l~~~~~~~~~~~~SPdG~~la~~-~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~ 173 (740)
T 4a5s_A 95 DIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAY 173 (740)
T ss_dssp EEEETTTTEECCSSCCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSS
T ss_pred EEEECCCCcEEEcccCCCcceeeEECCCCCEEEEE-ECCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCC
Confidence 79999988765544455678999999999999887 46889999998776433 222332222
Q ss_pred eEEEECCCCCEEEEEcCCC------------------------------------cEEEEeCCC---CCCcCceeEEEec
Q 019006 230 TGMSLSPDGSYLLTNGMDC------------------------------------KLCIWDMRP---YAPQNRCVKILEG 270 (347)
Q Consensus 230 ~~v~~~~~~~~l~t~~~d~------------------------------------~i~~wd~~~---~~~~~~~~~~~~~ 270 (347)
..+.|||||++|+..+.|. .|.+||+.. .... .. ..+..
T Consensus 174 ~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~-~~-~~l~~ 251 (740)
T 4a5s_A 174 SALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNA-TS-IQITA 251 (740)
T ss_dssp BCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCC-CE-EEECC
T ss_pred cceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcc-eE-EEecC
Confidence 3489999999999875332 356666653 2100 11 11211
Q ss_pred cc--cccccceEEEEECCCCCEEEEee----CCCeEEEEeCCCce----e--eEEe--cCCccCee-----eEEEcCCCC
Q 019006 271 HQ--HNFEKNLLKCGWSPDGSKVTAGS----SDRMVYIWDTTSRR----I--LYKL--PGHTGSVN-----ESVFHATEP 331 (347)
Q Consensus 271 ~~--~~~~~~~~~~~~s~~g~~l~sgs----~dg~i~vwd~~~~~----~--~~~~--~~h~~~v~-----~~~~~~~~~ 331 (347)
.. ......+..++|+|||++++... .+..|++||+.+++ + +.++ .+|.+.|. ..+|+|+++
T Consensus 252 ~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~ 331 (740)
T 4a5s_A 252 PASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGN 331 (740)
T ss_dssp CHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSS
T ss_pred CccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCC
Confidence 00 00234578899999999766543 33479999998876 2 2222 56766665 789999999
Q ss_pred EEE-EecC-CC--cEEeec
Q 019006 332 VIG-SCSS-DK--QIYLGE 346 (347)
Q Consensus 332 ~l~-s~s~-D~--~i~i~~ 346 (347)
.|+ ..+. || .|++++
T Consensus 332 ~l~~~~s~~~G~~~l~~~~ 350 (740)
T 4a5s_A 332 SFYKIISNEEGYRHICYFQ 350 (740)
T ss_dssp EEEEEEECTTSCEEEEEEE
T ss_pred EEEEEEEcCCCceEEEEEE
Confidence 877 6653 44 466665
No 175
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.79 E-value=2.4e-17 Score=156.61 Aligned_cols=245 Identities=13% Similarity=0.069 Sum_probs=169.0
Q ss_pred EeCcccceeEEEEcCCCCEEEEe--cCCCeEEEEECCCCceeeeeeccCccee---------Eeec--CCCCCC-EEEEE
Q 019006 96 LKGHKNAILDLHWTTDGSQIISA--SPDKTLRAWDVETGKQIKKMAEHNSFVN---------SCCP--SRRGPP-LVVSG 161 (347)
Q Consensus 96 ~~~h~~~v~~~~~~~~~~~l~s~--~~dg~i~iwd~~~~~~~~~~~~~~~~v~---------~~~~--~~~~~~-~~~s~ 161 (347)
+.+|...+..++|+++.-++++. +.++...||....+.....+..+...+. ...+ +|++.. ++++.
T Consensus 19 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~ 98 (662)
T 3azo_A 19 VASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTH 98 (662)
T ss_dssp HHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEB
T ss_pred HhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEEE
Confidence 45688889999999876666666 6688999998654444555555543333 3323 366666 55555
Q ss_pred cCCCceEEEeCC--C-CCceeecC-----CCCceEEEEEcCCCCeEEEEecC----------CcEEEEeCCC------Cc
Q 019006 162 SDDGTAKLWDMR--Q-RGAIQTFP-----DKYQITAVSFSDASDKIYTGGID----------NDVKVWDLRK------GE 217 (347)
Q Consensus 162 ~~d~~i~iwd~~--~-~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~~d----------g~i~iwd~~~------~~ 217 (347)
..+..|.++++. . +....... +...+..++|+|+++.|+.++.+ ..|++||+.+ ++
T Consensus 99 ~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 178 (662)
T 3azo_A 99 FGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSA 178 (662)
T ss_dssp TTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGG
T ss_pred CCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCc
Confidence 456777777775 2 33332222 34568899999999999988876 5799999987 54
Q ss_pred eEEEec-CCCCceeEEEECCCCCEEEEEcCC--------CcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCC
Q 019006 218 VSMTLQ-GHQDMITGMSLSPDGSYLLTNGMD--------CKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDG 288 (347)
Q Consensus 218 ~~~~~~-~~~~~i~~v~~~~~~~~l~t~~~d--------~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g 288 (347)
. ..+. .+...+..++|+|||++|+.++.+ ..|.+||+...............+ ...+..+.|+|||
T Consensus 179 ~-~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~----~~~~~~~~~spdg 253 (662)
T 3azo_A 179 V-RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGP----EEAIAQAEWAPDG 253 (662)
T ss_dssp S-EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEET----TBCEEEEEECTTS
T ss_pred e-eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCC----CceEcceEECCCC
Confidence 4 4444 555678889999999999887754 379999986211001222222221 2457788999999
Q ss_pred CEEEEeeCCC--eEEEEeCCCceeeEEecCCccC--------eeeEEEcCCCCEEEEecCCCcEEeec
Q 019006 289 SKVTAGSSDR--MVYIWDTTSRRILYKLPGHTGS--------VNESVFHATEPVIGSCSSDKQIYLGE 346 (347)
Q Consensus 289 ~~l~sgs~dg--~i~vwd~~~~~~~~~~~~h~~~--------v~~~~~~~~~~~l~s~s~D~~i~i~~ 346 (347)
+++++++.++ .|++||+.+++......++... +..++|+|++.++++++. +.++||.
T Consensus 254 ~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~ 320 (662)
T 3azo_A 254 SLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGI 320 (662)
T ss_dssp CEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEE
T ss_pred eEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEE
Confidence 9888888888 7788887777655444443332 568999999999999998 9988883
No 176
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.78 E-value=2e-14 Score=122.29 Aligned_cols=275 Identities=10% Similarity=0.054 Sum_probs=190.5
Q ss_pred ecCccccEEEEEECCCCCeEEEeeCCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEECCCC
Q 019006 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETG 132 (347)
Q Consensus 53 ~~~h~~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~ 132 (347)
+..+...+.++++.++|.++++...++.|.+|+..+. ........+...+.++++++++..+++...++.|..||.. +
T Consensus 10 ~~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~~~-~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g 87 (299)
T 2z2n_A 10 LTNQDTGPYGITVSDKGKVWITQHKANMISCINLDGK-ITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK-G 87 (299)
T ss_dssp CCSSSCCEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-S
T ss_pred CCCcCCCccceEECCCCCEEEEecCCCcEEEEcCCCC-eEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-C
Confidence 3455678999999999998887777889999998622 2212223345678999999999988887778999999976 3
Q ss_pred ceeeeee--ccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceee-cC-CCCceEEEEEcCCCCeEEEEecCCcE
Q 019006 133 KQIKKMA--EHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQT-FP-DKYQITAVSFSDASDKIYTGGIDNDV 208 (347)
Q Consensus 133 ~~~~~~~--~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~-~~-~~~~v~~~~~~~~~~~l~~~~~dg~i 208 (347)
+. ..+. .....+..++..+.+ .++++...++.|..||. .+..... .+ ....+..+++++++...++...++.|
T Consensus 88 ~~-~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i 164 (299)
T 2z2n_A 88 II-KEYTLPNPDSAPYGITEGPNG-DIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAI 164 (299)
T ss_dssp CE-EEEECSSTTCCEEEEEECTTS-CEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEE
T ss_pred cE-EEEeCCCcCCCceeeEECCCC-CEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEE
Confidence 32 2222 133455666666544 57777777889999998 4433222 22 23468899999998776666667899
Q ss_pred EEEeCCCCceEEE-ecCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCC
Q 019006 209 KVWDLRKGEVSMT-LQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPD 287 (347)
Q Consensus 209 ~iwd~~~~~~~~~-~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 287 (347)
..||. +++.... +......+.+++++++++..++...++.|.+||. ... . ..+... .....+..++++++
T Consensus 165 ~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~----~-~~~~~~--~~~~~~~~i~~~~~ 235 (299)
T 2z2n_A 165 GRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGE----I-TEFKIP--TPNARPHAITAGAG 235 (299)
T ss_dssp EEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCC----E-EEEECS--STTCCEEEEEECST
T ss_pred EEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCc----E-EEEECC--CCCCCceeEEECCC
Confidence 99998 6654332 3334456889999999998777777889999997 321 1 112111 11245778999999
Q ss_pred CCEEEEeeCCCeEEEEeCCCceee-EEecCCccCeeeEEEcCCCCEEEEecCCCcEE
Q 019006 288 GSKVTAGSSDRMVYIWDTTSRRIL-YKLPGHTGSVNESVFHATEPVIGSCSSDKQIY 343 (347)
Q Consensus 288 g~~l~sgs~dg~i~vwd~~~~~~~-~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~ 343 (347)
|.+.++...++.|..||. +++.. ..++.+...+..+++ +++.+.++.+.++.++
T Consensus 236 g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~-~~g~l~v~~~~~~l~~ 290 (299)
T 2z2n_A 236 IDLWFTEWGANKIGRLTS-NNIIEEYPIQIKSAEPHGICF-DGETIWFAMECDKIGK 290 (299)
T ss_dssp TCEEEEETTTTEEEEEET-TTEEEEEECSSSSCCEEEEEE-CSSCEEEEETTTEEEE
T ss_pred CCEEEeccCCceEEEECC-CCceEEEeCCCCCCccceEEe-cCCCEEEEecCCcEEE
Confidence 997777767889999998 44433 234556677899999 8888887766544443
No 177
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.77 E-value=2.1e-16 Score=137.90 Aligned_cols=256 Identities=13% Similarity=0.104 Sum_probs=165.9
Q ss_pred ccEEEEEECCCCCeEEEee---------CCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEecCC---C--e
Q 019006 58 SAVYTMKFNPAGTVIASGS---------HDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPD---K--T 123 (347)
Q Consensus 58 ~~V~~v~~~~~~~~l~s~~---------~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d---g--~ 123 (347)
..+..+++ +|+.+|... .++.|++|++.+.. ...+ ..+..+.|+|||++|+.++.+ + .
T Consensus 15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~--~~~l----~~~~~~~~SpDg~~la~~~~~~~~~~~~ 86 (347)
T 2gop_A 15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNA--RRFI----ENATMPRISPDGKKIAFMRANEEKKVSE 86 (347)
T ss_dssp CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCC--EEEE----ESCEEEEECTTSSEEEEEEEETTTTEEE
T ss_pred EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCc--eEEc----ccCCCeEECCCCCEEEEEEeccCCCcce
Confidence 35666777 888776542 25678899986532 2233 467889999999999887654 3 4
Q ss_pred EEEEECCCCceeeeeeccCcceeEeecCCCCCCEEEEEcC--------------------------CCceEEEeCCCCCc
Q 019006 124 LRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSD--------------------------DGTAKLWDMRQRGA 177 (347)
Q Consensus 124 i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~--------------------------d~~i~iwd~~~~~~ 177 (347)
|.+|++.+++..... .... +..+.+++++..++++... ...|.+||+.++..
T Consensus 87 l~~~~~~~g~~~~l~-~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~ 164 (347)
T 2gop_A 87 IWVADLETLSSKKIL-EAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEV 164 (347)
T ss_dssp EEEEETTTTEEEEEE-EESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEE
T ss_pred EEEEECCCCceEEEE-cCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeE
Confidence 777888877654333 3333 7778888877655544422 25688999987765
Q ss_pred eeecCCCCceEEEEEcCCCCeEEEEecCC-------cEEEEeCCCCceEEEecCCCCceeEEEECCCCCEEEEEcCC---
Q 019006 178 IQTFPDKYQITAVSFSDASDKIYTGGIDN-------DVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMD--- 247 (347)
Q Consensus 178 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-------~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~~d--- 247 (347)
+..+... .+..+.|+|++ .++++..++ ...+|.+.+++. ..+..+ ..+..+ +|+|++|+..+.+
T Consensus 165 ~~~l~~~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~-~~l~~~-~~~~~~--spdg~~l~~~~~~~~~ 238 (347)
T 2gop_A 165 IEEFEKP-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKE-EKMFEK-VSFYAV--DSDGERILLYGKPEKK 238 (347)
T ss_dssp EEEEEEE-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTEE-EEEEEE-ESEEEE--EECSSCEEEEECCSSS
T ss_pred EeeecCC-CcccccCCCCe-EEEEEecccccccccccccEEEeCCCce-EEeccC-cceeeE--CCCCCEEEEEEccccC
Confidence 2333223 67889999999 777775542 334443334443 333333 344443 8999988877644
Q ss_pred -----CcEEEEeCCCCCCcCceeEEEeccccccccceEE-EEECCCCCEEEEeeCCCeEEEEeCCCceeeEEecCCccCe
Q 019006 248 -----CKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLK-CGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSV 321 (347)
Q Consensus 248 -----~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~v 321 (347)
..|.+|| . .........+ ...+.. +.|+ |+ ++++++.++.++|| +.+++.. .+..+.+.|
T Consensus 239 ~~~~~~~l~~~d-~-----~~~~~l~~~~----~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~~~-~~~~~~~~v 304 (347)
T 2gop_A 239 YMSEHNKLYIYD-G-----KEVMGILDEV----DRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGEIK-PIAKGRHWI 304 (347)
T ss_dssp CCCSSCEEEEEC-S-----SCEEESSTTC----CSEEEEEEEET-TE-EEEEEEETTEEEEE-EESSSEE-EEECSSSEE
T ss_pred CccccceEEEEC-C-----CceEeccccC----CcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCCceE-EEecCCCeE
Confidence 3677787 2 1122222221 234554 7899 88 99999999999999 8766554 444557889
Q ss_pred eeEEEcCCCCEEEEecCCCcE-Eee
Q 019006 322 NESVFHATEPVIGSCSSDKQI-YLG 345 (347)
Q Consensus 322 ~~~~~~~~~~~l~s~s~D~~i-~i~ 345 (347)
..++|+| .++++++.++.. .||
T Consensus 305 ~~~~~s~--~~~~~~~~~~~~~~l~ 327 (347)
T 2gop_A 305 MGFDVDE--IVVYLKETATRLRELF 327 (347)
T ss_dssp EEEEESS--SEEEEEECSSSCCEEE
T ss_pred EeeeeeC--cEEEEEcCCCChHHhe
Confidence 9999999 677777776653 554
No 178
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.75 E-value=1.8e-16 Score=140.43 Aligned_cols=248 Identities=14% Similarity=0.106 Sum_probs=160.8
Q ss_pred eeeEEEeCcccceeE-----EEEcCCCCEEEEecC-CC--eEEEEECCCCceeeeeeccCcceeEeecCCCCCCEEEEEc
Q 019006 91 KNFMVLKGHKNAILD-----LHWTTDGSQIISASP-DK--TLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGS 162 (347)
Q Consensus 91 ~~~~~~~~h~~~v~~-----~~~~~~~~~l~s~~~-dg--~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~ 162 (347)
.....+..|...... .+|+|||++|+.++. ++ .|.+||+.+++.......+...+....+++++. .|+.++
T Consensus 21 ~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~-~l~~~~ 99 (388)
T 3pe7_A 21 AQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDD-ALFYVK 99 (388)
T ss_dssp CEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSS-EEEEEE
T ss_pred cceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCC-EEEEEe
Confidence 344556666555544 789999999998887 66 488889988876555544444443456777664 677777
Q ss_pred CCCceEEEeCCCCCceeecCCCC-ceEE--EEEcCCCCeEEEE----------------------ecCCcEEEEeCCCCc
Q 019006 163 DDGTAKLWDMRQRGAIQTFPDKY-QITA--VSFSDASDKIYTG----------------------GIDNDVKVWDLRKGE 217 (347)
Q Consensus 163 ~d~~i~iwd~~~~~~~~~~~~~~-~v~~--~~~~~~~~~l~~~----------------------~~dg~i~iwd~~~~~ 217 (347)
.++.+++||+.+++......... .+.. ..+++++..++.. ..+..|++||+.+++
T Consensus 100 ~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~ 179 (388)
T 3pe7_A 100 DGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGE 179 (388)
T ss_dssp TTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCC
T ss_pred CCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCc
Confidence 88899999999877654443322 2322 3458888887642 234679999999886
Q ss_pred eEEEecCCCCceeEEEECC-CCCEEEEEcCC------CcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCE
Q 019006 218 VSMTLQGHQDMITGMSLSP-DGSYLLTNGMD------CKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSK 290 (347)
Q Consensus 218 ~~~~~~~~~~~i~~v~~~~-~~~~l~t~~~d------~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~ 290 (347)
... +..+...+..+.|+| +|+.|+....+ ..|.++|..... ...+..+.. ...+...+|+|||+.
T Consensus 180 ~~~-l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~-----~~~l~~~~~--~~~~~~~~~spdg~~ 251 (388)
T 3pe7_A 180 STV-ILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTN-----MRKVKTHAE--GESCTHEFWVPDGSA 251 (388)
T ss_dssp EEE-EEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCC-----CEESCCCCT--TEEEEEEEECTTSSC
T ss_pred eEE-eecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCc-----eEEeeeCCC--CcccccceECCCCCE
Confidence 543 334556789999999 99988876653 367777765321 122222110 124667889999998
Q ss_pred EEEeeC-C----CeEEEEeCCCcee--eEEecCCcc---CeeeEEEcCCCCEEEEe---------cCCCcEEeecC
Q 019006 291 VTAGSS-D----RMVYIWDTTSRRI--LYKLPGHTG---SVNESVFHATEPVIGSC---------SSDKQIYLGEI 347 (347)
Q Consensus 291 l~sgs~-d----g~i~vwd~~~~~~--~~~~~~h~~---~v~~~~~~~~~~~l~s~---------s~D~~i~i~~~ 347 (347)
|+..+. + +.|++||+.+++. +..++++.. .....+|+|+++.|+.. ..+..|++||+
T Consensus 252 l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~ 327 (388)
T 3pe7_A 252 LVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNM 327 (388)
T ss_dssp EEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEET
T ss_pred EEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEec
Confidence 866443 2 2399999998874 334444211 12334799999988754 45678999874
No 179
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.75 E-value=8.9e-15 Score=124.82 Aligned_cols=242 Identities=14% Similarity=0.121 Sum_probs=168.7
Q ss_pred eEecCccccEEEEEECCCCC-eEEEeeCCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEEC
Q 019006 51 MLLTGHQSAVYTMKFNPAGT-VIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDV 129 (347)
Q Consensus 51 ~~~~~h~~~V~~v~~~~~~~-~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~ 129 (347)
..+..+.....+++|+|+|+ +++++..++.|+.|+..+. ...+..+...+.+++++++|+++++...++.|.+||.
T Consensus 21 ~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~---~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~ 97 (296)
T 3e5z_A 21 RRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ---LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQRE 97 (296)
T ss_dssp EEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC---EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECS
T ss_pred EEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC---eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcC
Confidence 34556667788999999998 8888889999999998654 4455667778999999999998888877899999999
Q ss_pred CCCceeeeeecc----CcceeEeecCCCCCCEEEE----Ec-------------CCCceEEEeCCCCCceeecCCCCceE
Q 019006 130 ETGKQIKKMAEH----NSFVNSCCPSRRGPPLVVS----GS-------------DDGTAKLWDMRQRGAIQTFPDKYQIT 188 (347)
Q Consensus 130 ~~~~~~~~~~~~----~~~v~~~~~~~~~~~~~~s----~~-------------~d~~i~iwd~~~~~~~~~~~~~~~v~ 188 (347)
.+++........ ...+..+++.+++ .++++ |+ ..+.|..++.. +.............
T Consensus 98 ~~g~~~~~~~~~~~~~~~~~~~i~~d~~G-~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~ 175 (296)
T 3e5z_A 98 PGGEWESIADSFEGKKLNSPNDVCLAPDG-SLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRVKPN 175 (296)
T ss_dssp TTCCEEEEECEETTEECCCCCCEEECTTS-CEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCSSEE
T ss_pred CCCcEEEEeeccCCCCCCCCCCEEECCCC-CEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCCCCCc
Confidence 777643322211 1233456666655 56665 33 12345555544 33322333445678
Q ss_pred EEEEcCCCCeEEEEecCCcEEEEeCC-CCce---EEEecCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCce
Q 019006 189 AVSFSDASDKIYTGGIDNDVKVWDLR-KGEV---SMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRC 264 (347)
Q Consensus 189 ~~~~~~~~~~l~~~~~dg~i~iwd~~-~~~~---~~~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~ 264 (347)
.++|+|+++.+++.+.++.|++||+. .++. ...+..+...+.+++++++|+..++. ++.|.+||.. ...
T Consensus 176 gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-----g~~ 248 (296)
T 3e5z_A 176 GLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD-----GDE 248 (296)
T ss_dssp EEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-----SCE
T ss_pred cEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC-----CCE
Confidence 99999999988777788999999986 4443 22333345567889999999877666 7889999964 233
Q ss_pred eEEEeccccccccceEEEEE-CCCCCEEEEeeCCCeEEEEeCCCcee
Q 019006 265 VKILEGHQHNFEKNLLKCGW-SPDGSKVTAGSSDRMVYIWDTTSRRI 310 (347)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~-s~~g~~l~sgs~dg~i~vwd~~~~~~ 310 (347)
+..+..+. . +..++| +|+++.|++++.+ .+..++..++++
T Consensus 249 ~~~~~~~~----~-~~~~~f~~~d~~~L~v~t~~-~l~~~~~~~~~~ 289 (296)
T 3e5z_A 249 LGRVLTPQ----T-TSNLCFGGPEGRTLYMTVST-EFWSIETNVRGL 289 (296)
T ss_dssp EEEEECSS----C-CCEEEEESTTSCEEEEEETT-EEEEEECSCCBC
T ss_pred EEEEECCC----C-ceeEEEECCCCCEEEEEcCC-eEEEEEcccccc
Confidence 44444322 2 667888 6899999988876 466667766654
No 180
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.74 E-value=5.2e-15 Score=126.29 Aligned_cols=235 Identities=10% Similarity=0.007 Sum_probs=167.5
Q ss_pred EEEeCcccceeEEEEcCCCC-EEEEecCCCeEEEEECCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeC
Q 019006 94 MVLKGHKNAILDLHWTTDGS-QIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDM 172 (347)
Q Consensus 94 ~~~~~h~~~v~~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~ 172 (347)
..+..+.....+++|+|+++ .++++..++.|..|+..++ ...+..+...+..+++.+++ .++++...++.|.+||.
T Consensus 21 ~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg-~l~v~~~~~~~i~~~d~ 97 (296)
T 3e5z_A 21 RRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQG-HLIACSHGLRRLERQRE 97 (296)
T ss_dssp EEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTC-CEEEEETTTTEEEEECS
T ss_pred EEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCC-cEEEEecCCCeEEEEcC
Confidence 34445556678999999998 7778888999999999876 55555566667777777765 47777767789999999
Q ss_pred CCCCceeecCC-----CCceEEEEEcCCCCeEEE----Eec-------------CCcEEEEeCCCCceEEEecCCCCcee
Q 019006 173 RQRGAIQTFPD-----KYQITAVSFSDASDKIYT----GGI-------------DNDVKVWDLRKGEVSMTLQGHQDMIT 230 (347)
Q Consensus 173 ~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~----~~~-------------dg~i~iwd~~~~~~~~~~~~~~~~i~ 230 (347)
.++........ ...+..++++|+++.+++ |+. .+.|..++.. ++. ..+..+.....
T Consensus 98 ~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~-~~~~~~~~~~~ 175 (296)
T 3e5z_A 98 PGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTL-SAPIRDRVKPN 175 (296)
T ss_dssp TTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCE-EEEECCCSSEE
T ss_pred CCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCE-EEeecCCCCCc
Confidence 77664332211 124567999999987776 331 3467677665 443 33444556678
Q ss_pred EEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCce---eEEEeccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCC
Q 019006 231 GMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRC---VKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTS 307 (347)
Q Consensus 231 ~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~ 307 (347)
.++|+|+++.+++...++.|.+||+... +.. ...+ .. ....+..++++++|.++++. ++.|++||..
T Consensus 176 gi~~s~dg~~lv~~~~~~~i~~~~~~~~---g~~~~~~~~~-~~---~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~- 245 (296)
T 3e5z_A 176 GLAFLPSGNLLVSDTGDNATHRYCLNAR---GETEYQGVHF-TV---EPGKTDGLRVDAGGLIWASA--GDGVHVLTPD- 245 (296)
T ss_dssp EEEECTTSCEEEEETTTTEEEEEEECSS---SCEEEEEEEE-CC---SSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-
T ss_pred cEEECCCCCEEEEeCCCCeEEEEEECCC---CcCcCCCeEe-eC---CCCCCCeEEECCCCCEEEEc--CCeEEEECCC-
Confidence 9999999998877788899999998621 111 1222 11 12334567899999977766 7899999986
Q ss_pred ceeeEEecCCccCeeeEEE-cCCCCEEEEecCCCcEEe
Q 019006 308 RRILYKLPGHTGSVNESVF-HATEPVIGSCSSDKQIYL 344 (347)
Q Consensus 308 ~~~~~~~~~h~~~v~~~~~-~~~~~~l~s~s~D~~i~i 344 (347)
++.+..+..+.. +..++| +|+++.|..++.++..++
T Consensus 246 g~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~~l~~~ 282 (296)
T 3e5z_A 246 GDELGRVLTPQT-TSNLCFGGPEGRTLYMTVSTEFWSI 282 (296)
T ss_dssp SCEEEEEECSSC-CCEEEEESTTSCEEEEEETTEEEEE
T ss_pred CCEEEEEECCCC-ceeEEEECCCCCEEEEEcCCeEEEE
Confidence 777778887777 999999 588888888887765544
No 181
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.72 E-value=1.5e-14 Score=121.49 Aligned_cols=236 Identities=6% Similarity=-0.080 Sum_probs=161.5
Q ss_pred ceeEEEEcCCCCEEE-EecCCCeEEEEECCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceee
Q 019006 102 AILDLHWTTDGSQII-SASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQT 180 (347)
Q Consensus 102 ~v~~~~~~~~~~~l~-s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~ 180 (347)
...+++++++++.++ +...++.|.+|+..+.............+..+++.+.+ .++++.. ++.|..||.........
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g-~l~v~~~-~~~i~~~d~~~~~~~~~ 102 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAG-TVYVTDF-NNRVVTLAAGSNNQTVL 102 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTC-CEEEEET-TTEEEEECTTCSCCEEC
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCC-CEEEEcC-CCEEEEEeCCCceEeee
Confidence 567899999998777 55778999999876544322111222344556666654 4666655 88999999876543322
Q ss_pred c-CCCCceEEEEEcCCCCeEEEEecCCcEEEEeCCCCceEEEecCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCC
Q 019006 181 F-PDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYA 259 (347)
Q Consensus 181 ~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~ 259 (347)
. .....+..+++++++..+++...++.|.+|+..+.............+.+++++++++.+++...++.|.+||.....
T Consensus 103 ~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~ 182 (270)
T 1rwi_B 103 PFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNN 182 (270)
T ss_dssp CCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCC
T ss_pred ecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCc
Confidence 1 222568899999998877776778899999866544333222333457889999999988777778899999976321
Q ss_pred CcCceeEEEeccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCCceeeEEecCCccCeeeEEEcCCCCEEEEecCC
Q 019006 260 PQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSD 339 (347)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D 339 (347)
....... . ...+..++++++|.++++...++.|++||............+...+..+++++++.++++...+
T Consensus 183 ----~~~~~~~---~-~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~ 254 (270)
T 1rwi_B 183 ----QVVLPFT---D-ITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGN 254 (270)
T ss_dssp ----EEECCCS---S-CCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEGGG
T ss_pred ----eEeeccc---C-CCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCCEEEEECCC
Confidence 1111111 1 1357788999999888888888999999987655443222344578999999999999999999
Q ss_pred CcEEeecC
Q 019006 340 KQIYLGEI 347 (347)
Q Consensus 340 ~~i~i~~~ 347 (347)
+.|+++++
T Consensus 255 ~~v~~~~~ 262 (270)
T 1rwi_B 255 DRVVKLTS 262 (270)
T ss_dssp TEEEEECC
T ss_pred CEEEEEcC
Confidence 99999874
No 182
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.72 E-value=5.2e-16 Score=148.17 Aligned_cols=244 Identities=11% Similarity=-0.027 Sum_probs=158.4
Q ss_pred CccccEEEEEECCCCCeEE-----EeeCCCcEEEEeccCCCeeeEEEeCcccce--eEEEEcCCCCEEEEecCCCe----
Q 019006 55 GHQSAVYTMKFNPAGTVIA-----SGSHDRDIFLWHVHGDCKNFMVLKGHKNAI--LDLHWTTDGSQIISASPDKT---- 123 (347)
Q Consensus 55 ~h~~~V~~v~~~~~~~~l~-----s~~~d~~v~~w~~~~~~~~~~~~~~h~~~v--~~~~~~~~~~~l~s~~~dg~---- 123 (347)
+|...+..++|||||++|| .|+.+.+|++||+.+.... ...+...+ ..++|+|||+.|+.++.|..
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~---~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~ 194 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWS---KVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIK 194 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBC---SSCCBSCCTTCCCEECTTSSEEEEEECCCCTTSC
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCc---CCcccCcccccceEEecCCCEEEEEEecCCCCCc
Confidence 5666899999999999998 5666788999999754221 01122222 67899999999999988776
Q ss_pred ---------EEEEECCCCce----eeeeeccCcceeEeecCCCCCCEEEEEcCC-C--ceEEEeCCCCCceeecCCCCce
Q 019006 124 ---------LRAWDVETGKQ----IKKMAEHNSFVNSCCPSRRGPPLVVSGSDD-G--TAKLWDMRQRGAIQTFPDKYQI 187 (347)
Q Consensus 124 ---------i~iwd~~~~~~----~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d-~--~i~iwd~~~~~~~~~~~~~~~v 187 (347)
|++|++.++.. +.....+...+....+++++..++++...+ + .|.++|..++...........+
T Consensus 195 ~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~ 274 (695)
T 2bkl_A 195 VDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAK 274 (695)
T ss_dssp GGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCC
T ss_pred cccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCce
Confidence 99999988752 222233445667778888886665554433 2 5666766554443333333344
Q ss_pred EEEEEcCCCCeEEEEec----CCcEEEEeCCCCce---EEEecCC-CCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCC
Q 019006 188 TAVSFSDASDKIYTGGI----DNDVKVWDLRKGEV---SMTLQGH-QDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYA 259 (347)
Q Consensus 188 ~~~~~~~~~~~l~~~~~----dg~i~iwd~~~~~~---~~~~~~~-~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~ 259 (347)
....+ +++. ++..+. ++.|.+||+.+++. ...+..+ ...+..++|+ ++..+++...|+..++|.+...
T Consensus 275 ~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~- 350 (695)
T 2bkl_A 275 YEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVATLK- 350 (695)
T ss_dssp EEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEETT-
T ss_pred EEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCC-
Confidence 44445 4556 544443 57899999977652 2333333 4567888887 6778888888998888866421
Q ss_pred CcCceeEEEeccccccccceEEEEECCCCCEEEEe----eCCCeEEEEeCCCcee
Q 019006 260 PQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAG----SSDRMVYIWDTTSRRI 310 (347)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sg----s~dg~i~vwd~~~~~~ 310 (347)
......+..+. ...+..++++|+++.|+.. ...+.|++||+.+++.
T Consensus 351 --g~~~~~l~~~~---~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~ 400 (695)
T 2bkl_A 351 --GKPVRTVQLPG---VGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKS 400 (695)
T ss_dssp --CCEEEECCCSS---SSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCE
T ss_pred --CCeeEEecCCC---CeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence 22223332211 2345567789999877733 3357899999988763
No 183
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.72 E-value=1.1e-14 Score=139.35 Aligned_cols=242 Identities=14% Similarity=0.057 Sum_probs=164.8
Q ss_pred cccceeEEEEcCCCCEEEEecCCC-----eEEEEECCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCCc-------
Q 019006 99 HKNAILDLHWTTDGSQIISASPDK-----TLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGT------- 166 (347)
Q Consensus 99 h~~~v~~~~~~~~~~~l~s~~~dg-----~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~------- 166 (347)
|...+..++|||||++|+.++.++ .|++||+.+++.......+. .+..+.+++++. .|+.++.++.
T Consensus 123 ~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~-~~~~~~wspDg~-~l~~~~~~~~~~~~~~~ 200 (710)
T 2xdw_A 123 GTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERV-KFSCMAWTHDGK-GMFYNAYPQQDGKSDGT 200 (710)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEE-CSCCEEECTTSS-EEEEEECCCCSSCCSSS
T ss_pred CCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCc-ccceEEEEeCCC-EEEEEEECCcccccccc
Confidence 444688999999999998765433 89999999987665332222 244567777765 4555555554
Q ss_pred ---------eEEEeCCCCCce--eecC---CCCceEEEEEcCCCCeEEEEec-----CCcEEEEeCCC------Cc-eEE
Q 019006 167 ---------AKLWDMRQRGAI--QTFP---DKYQITAVSFSDASDKIYTGGI-----DNDVKVWDLRK------GE-VSM 220 (347)
Q Consensus 167 ---------i~iwd~~~~~~~--~~~~---~~~~v~~~~~~~~~~~l~~~~~-----dg~i~iwd~~~------~~-~~~ 220 (347)
|++|++.++... ..+. +...+..+.|+|++++++..+. +..|++||+.+ +. ...
T Consensus 201 ~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~ 280 (710)
T 2xdw_A 201 ETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWV 280 (710)
T ss_dssp CCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCE
T ss_pred ccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceE
Confidence 999999876521 2222 2334778999999999887664 56899999976 43 345
Q ss_pred EecCCCCceeEEEECCCCCEEEEEcCC----CcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEEEEeeC
Q 019006 221 TLQGHQDMITGMSLSPDGSYLLTNGMD----CKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSS 296 (347)
Q Consensus 221 ~~~~~~~~i~~v~~~~~~~~l~t~~~d----~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~ 296 (347)
.+..+...+.. .|+|+|+.|+..+.+ +.|.+||+..... ...+.+..+.. ...+..++|++++.++++...
T Consensus 281 ~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~--~~~~~l~~~~~--~~~~~~~~~~~~~~lv~~~~~ 355 (710)
T 2xdw_A 281 KLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEE--SKWKVLVPEHE--KDVLEWVACVRSNFLVLCYLH 355 (710)
T ss_dssp EEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCG--GGCEEEECCCS--SCEEEEEEEETTTEEEEEEEE
T ss_pred EeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCc--ccceeccCCCC--CCeEEEEEEEcCCEEEEEEEE
Confidence 55556555544 488888887766543 3699999875321 11123333221 124667888888888888888
Q ss_pred CCe--EEEEeCCCceeeEEecCCccCeeeEEEcCCCCEEEE----ecCCCcEEeecC
Q 019006 297 DRM--VYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGS----CSSDKQIYLGEI 347 (347)
Q Consensus 297 dg~--i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s----~s~D~~i~i~~~ 347 (347)
|+. |++||+.+++.+..+..+.+.+..++++|+++.++. ....++|+++|+
T Consensus 356 ~g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~ 412 (710)
T 2xdw_A 356 DVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDL 412 (710)
T ss_dssp TTEEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEET
T ss_pred CCEEEEEEEECCCCCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEEC
Confidence 884 667787778777888888888999999999876652 224578888874
No 184
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.71 E-value=8e-13 Score=112.41 Aligned_cols=275 Identities=10% Similarity=0.026 Sum_probs=188.7
Q ss_pred CccccEEEEEECCCCCeEEEeeCCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEECCCCce
Q 019006 55 GHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQ 134 (347)
Q Consensus 55 ~h~~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~ 134 (347)
.....+.+|.+.++|.+.++...++.|.+|+..+. .....+..+...+.++++++++...++...++.|..+|.. ++.
T Consensus 17 ~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~ 94 (300)
T 2qc5_A 17 IPDSGPYGITSSEDGKVWFTQHKANKISSLDQSGR-IKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGF 94 (300)
T ss_dssp STTCCEEEEEECTTSCEEEEETTTTEEEEECTTSC-EEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE
T ss_pred CCCCCcceeeECCCCCEEEEcCCCCeEEEECCCCc-eEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCe
Confidence 44567899999999998888878899999997622 2222233344678999999999888877778899999987 544
Q ss_pred eeeeec--cCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCcee-ecC-CCCceEEEEEcCCCCeEEEEecCCcEEE
Q 019006 135 IKKMAE--HNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQ-TFP-DKYQITAVSFSDASDKIYTGGIDNDVKV 210 (347)
Q Consensus 135 ~~~~~~--~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~-~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~i 210 (347)
. .+.. ....+..++..+.+ .++++...++.|..+|.. +.... .++ ....+..++++++++..++...++.|..
T Consensus 95 ~-~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~ 171 (300)
T 2qc5_A 95 T-EYPLPQPDSGPYGITEGLNG-DIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGR 171 (300)
T ss_dssp E-EEECSSTTCCEEEEEECSTT-CEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEE
T ss_pred E-EecCCCCCCCCccceECCCC-CEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEE
Confidence 2 2221 23445566666544 577777667889999987 44332 223 2346889999999886555556788999
Q ss_pred EeCCCCceEE-EecCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCC
Q 019006 211 WDLRKGEVSM-TLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGS 289 (347)
Q Consensus 211 wd~~~~~~~~-~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~ 289 (347)
||. +++... ....+...+..++++++++..++....+.|.+||.. . .... .... .....+..++++++|.
T Consensus 172 ~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~-g----~~~~-~~~~--~~~~~~~~i~~d~~g~ 242 (300)
T 2qc5_A 172 ITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITTT-G----EISE-YDIP--TPNARPHAITAGKNSE 242 (300)
T ss_dssp ECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTT-C----CEEE-EECS--STTCCEEEEEECSTTC
T ss_pred ECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcCC-C----cEEE-EECC--CCCCCceEEEECCCCC
Confidence 998 454332 222344568899999999877777777789999862 1 1111 1111 1123577889999999
Q ss_pred EEEEeeCCCeEEEEeCCCceee-EEecCCccCeeeEEEcCCCCEEEEecCCCcEEeec
Q 019006 290 KVTAGSSDRMVYIWDTTSRRIL-YKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGE 346 (347)
Q Consensus 290 ~l~sgs~dg~i~vwd~~~~~~~-~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~i~~ 346 (347)
+.++...++.|..||.. ++.. ..+......+..+++.+++.+.++.. + .|..+|
T Consensus 243 l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~-~-~i~~~~ 297 (300)
T 2qc5_A 243 IWFTEWGANQIGRITND-NTIQEYQLQTENAEPHGITFGKDGSVWFALK-C-KIGKLN 297 (300)
T ss_dssp EEEEETTTTEEEEECTT-SCEEEEECCSTTCCCCCEEECTTSCEEEECS-S-EEEEEE
T ss_pred EEEeccCCCeEEEECCC-CcEEEEECCccCCccceeEeCCCCCEEEEcc-C-ceEEeC
Confidence 77777778899999984 4433 33454556789999999998777666 4 555543
No 185
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.71 E-value=4.1e-15 Score=142.31 Aligned_cols=244 Identities=14% Similarity=0.112 Sum_probs=159.8
Q ss_pred CccccEEEEEECCCCCeEEEeeCCC-----cEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEecCCCe------
Q 019006 55 GHQSAVYTMKFNPAGTVIASGSHDR-----DIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKT------ 123 (347)
Q Consensus 55 ~h~~~V~~v~~~~~~~~l~s~~~d~-----~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~------ 123 (347)
+|...+..++|||||++||.+..++ .|++||+.+.......+. ...+..++|+|||+.|+.++.++.
T Consensus 122 ~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~--~~~~~~~~wspDg~~l~~~~~~~~~~~~~~ 199 (710)
T 2xdw_A 122 DGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLE--RVKFSCMAWTHDGKGMFYNAYPQQDGKSDG 199 (710)
T ss_dssp TSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEE--EECSCCEEECTTSSEEEEEECCCCSSCCSS
T ss_pred CCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCccccc--CcccceEEEEeCCCEEEEEEECCccccccc
Confidence 4556789999999999998765543 899999965322111222 223677999999999998887765
Q ss_pred ----------EEEEECCCCcee----eeeeccCcceeEeecCCCCCCEEEEEcC----CCceEEEeCCC------CC-ce
Q 019006 124 ----------LRAWDVETGKQI----KKMAEHNSFVNSCCPSRRGPPLVVSGSD----DGTAKLWDMRQ------RG-AI 178 (347)
Q Consensus 124 ----------i~iwd~~~~~~~----~~~~~~~~~v~~~~~~~~~~~~~~s~~~----d~~i~iwd~~~------~~-~~ 178 (347)
|++|++.+++.. .....+........+++++..++++... +..|.+||+.+ +. ..
T Consensus 200 ~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~ 279 (710)
T 2xdw_A 200 TETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKW 279 (710)
T ss_dssp SCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCC
T ss_pred cccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccce
Confidence 999999877522 1222234455677788887655554431 56899999875 32 23
Q ss_pred eec-CCCCceEEEEEcCCCCeEEEEecC----CcEEEEeCCCCce--EEEecCCCC--ceeEEEECCCCCEEEEEcCCCc
Q 019006 179 QTF-PDKYQITAVSFSDASDKIYTGGID----NDVKVWDLRKGEV--SMTLQGHQD--MITGMSLSPDGSYLLTNGMDCK 249 (347)
Q Consensus 179 ~~~-~~~~~v~~~~~~~~~~~l~~~~~d----g~i~iwd~~~~~~--~~~~~~~~~--~i~~v~~~~~~~~l~t~~~d~~ 249 (347)
..+ .+...+.. .|+++++.++..+.+ +.|.+||+.++.. ...+..|.. .+..++|++++..+++...|+.
T Consensus 280 ~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~ 358 (710)
T 2xdw_A 280 VKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVK 358 (710)
T ss_dssp EEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTE
T ss_pred EEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCE
Confidence 333 22223333 478888887766543 3599999987641 234444433 6888999877778888888875
Q ss_pred --EEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEEEEe-e---CCCeEEEEeCCCce
Q 019006 250 --LCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAG-S---SDRMVYIWDTTSRR 309 (347)
Q Consensus 250 --i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sg-s---~dg~i~vwd~~~~~ 309 (347)
|.+||+.. +.....+..+ ...+..++++|++..|+.. + ..+.|++||+.+++
T Consensus 359 ~~l~~~~~~~----g~~~~~l~~~----~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 359 NTLQLHDLAT----GALLKIFPLE----VGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp EEEEEEETTT----CCEEEEECCC----SSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred EEEEEEECCC----CCEEEecCCC----CceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 55566532 2233344332 3457778899999876633 2 34789999998876
No 186
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.71 E-value=9.1e-15 Score=126.73 Aligned_cols=255 Identities=9% Similarity=-0.052 Sum_probs=174.5
Q ss_pred CCCcEEEEeccCCCeeeEEE----e--CcccceeEEEEcCCCCEEEEecCCCeEEEEECCCCceeeeeeccCcceeEeec
Q 019006 77 HDRDIFLWHVHGDCKNFMVL----K--GHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCP 150 (347)
Q Consensus 77 ~d~~v~~w~~~~~~~~~~~~----~--~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~ 150 (347)
.++.|.+||.... +....+ . ........+.+. +++..++...++.|.+||..+++.+..+.. ......+++
T Consensus 15 ~~~~l~~~d~~t~-~~~~~i~~~~n~~~lg~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~~-~~~p~~i~~ 91 (328)
T 3dsm_A 15 SNATLSYYDPATC-EVENEVFYRANGFKLGDVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRITG-FTSPRYIHF 91 (328)
T ss_dssp CCBEEEEEETTTT-EEECSHHHHHHSSCCBSCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEEC-CSSEEEEEE
T ss_pred CCceEEEEECCCC-EEhhhhHhhhcCcccCccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcCC-CCCCcEEEE
Confidence 4789999998532 111111 0 111335667774 345556666789999999999998887743 334455666
Q ss_pred CCCCCCEEEEEcCCCceEEEeCCCCCceeecCCCC------ceEEEEEcCCCCeEEEEe--cCCcEEEEeCCCCceEEEe
Q 019006 151 SRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKY------QITAVSFSDASDKIYTGG--IDNDVKVWDLRKGEVSMTL 222 (347)
Q Consensus 151 ~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~~~~------~v~~~~~~~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~ 222 (347)
++.+ .++++...++.|.+||..+++....++... ....+++ +++.++++. .++.|.++|+.+++....+
T Consensus 92 ~~~g-~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i 168 (328)
T 3dsm_A 92 LSDE-KAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDEL 168 (328)
T ss_dssp EETT-EEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEEEE
T ss_pred eCCC-eEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEE
Confidence 4554 555555588999999999887766554333 4556666 456666655 4889999999999877776
Q ss_pred cCCCCceeEEEECCCCCEEEEEcCC----------CcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEEE
Q 019006 223 QGHQDMITGMSLSPDGSYLLTNGMD----------CKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVT 292 (347)
Q Consensus 223 ~~~~~~i~~v~~~~~~~~l~t~~~d----------~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~ 292 (347)
... .....+.++|+|++++++..+ +.|.++|.... +....+.... ......++|+|++++|.
T Consensus 169 ~~g-~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~----~v~~~~~~~~---g~~p~~la~~~d~~~ly 240 (328)
T 3dsm_A 169 TIG-IQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETF----TVEKQFKFKL---GDWPSEVQLNGTRDTLY 240 (328)
T ss_dssp ECS-SCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTT----EEEEEEECCT---TCCCEEEEECTTSCEEE
T ss_pred EcC-CCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCC----eEEEEEecCC---CCCceeEEEecCCCEEE
Confidence 543 335788999999977777654 78999997642 2333332111 12467899999999998
Q ss_pred EeeCCCeEEEEeCCCceeeE--EecCCccCeeeEEEcC-CCCEEEEe----cCCCcEEeecC
Q 019006 293 AGSSDRMVYIWDTTSRRILY--KLPGHTGSVNESVFHA-TEPVIGSC----SSDKQIYLGEI 347 (347)
Q Consensus 293 sgs~dg~i~vwd~~~~~~~~--~~~~h~~~v~~~~~~~-~~~~l~s~----s~D~~i~i~~~ 347 (347)
++.. .|++||..++++.. .+..+......++++| ++.+.++. ..++.|.+||.
T Consensus 241 v~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~ 300 (328)
T 3dsm_A 241 WINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSP 300 (328)
T ss_dssp EESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECT
T ss_pred EEcc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECC
Confidence 8765 89999998887642 1222245688999999 66777776 67889999873
No 187
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.71 E-value=1.1e-13 Score=127.84 Aligned_cols=282 Identities=13% Similarity=0.111 Sum_probs=190.3
Q ss_pred ccEEEEEECCCCCeEEEeeCCCcEEEEecc-CCCeeeEEEeCcccceeEEEEc----CCCCEEEEecC-CCeEEEEECCC
Q 019006 58 SAVYTMKFNPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNAILDLHWT----TDGSQIISASP-DKTLRAWDVET 131 (347)
Q Consensus 58 ~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~-~~~~~~~~~~~h~~~v~~~~~~----~~~~~l~s~~~-dg~i~iwd~~~ 131 (347)
..++.+.|+|+|++|++++.|+.|.+||+. ...+....+... .....++|+ |||++++++.. ++++.++|..+
T Consensus 197 ~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G-~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t 275 (567)
T 1qks_A 197 YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIG-SEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGET 275 (567)
T ss_dssp SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECC-SEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTT
T ss_pred CCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecC-CCCceeEEccccCCCCCEEEEEEccCCeEEEEECCC
Confidence 356789999999999999999999999984 223334444432 235789999 69998887764 58999999999
Q ss_pred CceeeeeeccC----------c-ceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCc--eeecCCCCceEEEEEcCCCCe
Q 019006 132 GKQIKKMAEHN----------S-FVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGA--IQTFPDKYQITAVSFSDASDK 198 (347)
Q Consensus 132 ~~~~~~~~~~~----------~-~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~--~~~~~~~~~v~~~~~~~~~~~ 198 (347)
.+.+..+.... . .+..+..++.++.++++...+|.|.++|...... +..+........+.|+|++++
T Consensus 276 ~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~ 355 (567)
T 1qks_A 276 LEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRY 355 (567)
T ss_dssp CCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCE
T ss_pred CcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCceECCCCCE
Confidence 88877654321 1 3344555555566777777889999999875432 223333445667899999998
Q ss_pred EEEEe-cCCcEEEEeCCCCceEEEecC-----CCCceeEEE-ECCCCC-EEEEEc-CCCcEEEEeCCCCCC---cCceeE
Q 019006 199 IYTGG-IDNDVKVWDLRKGEVSMTLQG-----HQDMITGMS-LSPDGS-YLLTNG-MDCKLCIWDMRPYAP---QNRCVK 266 (347)
Q Consensus 199 l~~~~-~dg~i~iwd~~~~~~~~~~~~-----~~~~i~~v~-~~~~~~-~l~t~~-~d~~i~~wd~~~~~~---~~~~~~ 266 (347)
++++. .+++|.++|+.+++....+.- |.. ..+. ++|++. ..+++. .++.|.++|..+... ..+.++
T Consensus 356 ~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg--~g~~~~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~ 433 (567)
T 1qks_A 356 FITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPG--RGANFVHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILD 433 (567)
T ss_dssp EEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCT--TCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEE
T ss_pred EEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCc--cceeeECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEE
Confidence 87665 678999999999987665543 221 2233 578744 444543 468999999875221 134455
Q ss_pred EEeccccccccceEEEEECCCCCEEEEeeC-------CCeEEEEeCCCc-----eee-EEec--------CCccCeeeEE
Q 019006 267 ILEGHQHNFEKNLLKCGWSPDGSKVTAGSS-------DRMVYIWDTTSR-----RIL-YKLP--------GHTGSVNESV 325 (347)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~-------dg~i~vwd~~~~-----~~~-~~~~--------~h~~~v~~~~ 325 (347)
.+.... ..-.-+..+|++++|.+... .+.|.+||..+. ... ..++ .-...+..+.
T Consensus 434 ~i~~~g----~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 509 (567)
T 1qks_A 434 SFPALG----GGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGE 509 (567)
T ss_dssp EEECSC----SCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEE
T ss_pred EEecCC----CCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceEeee
Confidence 554431 11123457999999988663 459999998876 211 2332 1245789999
Q ss_pred EcCCCCEEEEe--c---CCCcEEeec
Q 019006 326 FHATEPVIGSC--S---SDKQIYLGE 346 (347)
Q Consensus 326 ~~~~~~~l~s~--s---~D~~i~i~~ 346 (347)
|+|+++.+..+ + .++.|.|.|
T Consensus 510 ~~~~G~~~~~s~~~~~~~~~~i~v~D 535 (567)
T 1qks_A 510 FNKDGTEVWFSVWNGKDQESALVVVD 535 (567)
T ss_dssp ECTTSSEEEEEEECCTTSCCEEEEEE
T ss_pred ECCCCCEEEEEeecCCCCCCcEEEEE
Confidence 99999866544 2 367787765
No 188
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.70 E-value=3.8e-14 Score=118.97 Aligned_cols=240 Identities=9% Similarity=0.027 Sum_probs=165.0
Q ss_pred cEEEEEECCCCCeEE-EeeCCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEECCCCceeee
Q 019006 59 AVYTMKFNPAGTVIA-SGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKK 137 (347)
Q Consensus 59 ~V~~v~~~~~~~~l~-s~~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 137 (347)
...+++++++|.+++ +...++.|.+|+..+.... .....+...+.+++++++++.+++.. ++.|.+||....... .
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~-~ 101 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTT-VLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQT-V 101 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----E-ECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCE-E
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccc-eEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEe-e
Confidence 678999999999877 5577889999987432211 11122334678899999998666666 889999998765432 2
Q ss_pred ee-ccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeec-CCCCceEEEEEcCCCCeEEEEecCCcEEEEeCCC
Q 019006 138 MA-EHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTF-PDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRK 215 (347)
Q Consensus 138 ~~-~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 215 (347)
+. ........++..+.+ .++++...++.|.+|+..+....... .....+..++++++++.+++...++.|.+||...
T Consensus 102 ~~~~~~~~p~~i~~~~~g-~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~ 180 (270)
T 1rwi_B 102 LPFDGLNYPEGLAVDTQG-AVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAES 180 (270)
T ss_dssp CCCCSCSSEEEEEECTTC-CEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTT
T ss_pred eecCCcCCCcceEECCCC-CEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCC
Confidence 22 222445566666654 57777777889999986554333222 2223577899999988666666778999999876
Q ss_pred CceEEEecCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEEEEee
Q 019006 216 GEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGS 295 (347)
Q Consensus 216 ~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs 295 (347)
.........+...+.+++++++|+.+++...++.|.+||..... ....... ....+..++++++|.++++..
T Consensus 181 ~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~-----~~~~~~~---~~~~p~~i~~~~~g~l~v~~~ 252 (270)
T 1rwi_B 181 NNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTT-----STVLPFT---GLNTPLAVAVDSDRTVYVADR 252 (270)
T ss_dssp CCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSC-----CEECCCC---SCSCEEEEEECTTCCEEEEEG
T ss_pred CceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCc-----ceeeccC---CCCCceeEEECCCCCEEEEEC
Confidence 65444333333568899999999888887778899999975321 1111110 013578899999999888999
Q ss_pred CCCeEEEEeCCCcee
Q 019006 296 SDRMVYIWDTTSRRI 310 (347)
Q Consensus 296 ~dg~i~vwd~~~~~~ 310 (347)
.++.|++|+....+.
T Consensus 253 ~~~~v~~~~~~~~~~ 267 (270)
T 1rwi_B 253 GNDRVVKLTSLEHHH 267 (270)
T ss_dssp GGTEEEEECCCGGGS
T ss_pred CCCEEEEEcCCCccc
Confidence 999999999877654
No 189
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.70 E-value=1.9e-13 Score=118.52 Aligned_cols=240 Identities=10% Similarity=0.087 Sum_probs=159.5
Q ss_pred eeEecCccccEEEEEECCCCCeEEEeeCCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEecCC----CeEE
Q 019006 50 IMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPD----KTLR 125 (347)
Q Consensus 50 ~~~~~~h~~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d----g~i~ 125 (347)
...+.++...+.+++|+|+|++++++..++.|++|+..+.. .......+...+.+++|+++++++++...+ +.|.
T Consensus 37 ~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~-~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~ 115 (333)
T 2dg1_A 37 WLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKE-IKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIF 115 (333)
T ss_dssp EEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCC-EEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEE
T ss_pred eEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCc-EEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEE
Confidence 34566777788999999999988888899999999986432 222223556789999999999988877666 6899
Q ss_pred EEECCCCceeeeee--ccCcceeEeecCCCCCCEEEEEcC------CCceEEEeCCCCCceeecCCCCceEEEEEcCCCC
Q 019006 126 AWDVETGKQIKKMA--EHNSFVNSCCPSRRGPPLVVSGSD------DGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASD 197 (347)
Q Consensus 126 iwd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~s~~~------d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~ 197 (347)
+||..+++....+. .....+..+.+.+.+ .++++... .+.|..+|..++...........+..++|+|+++
T Consensus 116 ~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g-~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~ 194 (333)
T 2dg1_A 116 AATENGDNLQDIIEDLSTAYCIDDMVFDSKG-GFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEK 194 (333)
T ss_dssp EECTTSCSCEEEECSSSSCCCEEEEEECTTS-CEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSS
T ss_pred EEeCCCCEEEEEEccCccCCcccceEECCCC-CEEEEeccccccCCCceEEEEeCCCCEEEEeecCCCcccceEECCCCC
Confidence 99988766432222 223456667777765 45555443 2456666655444332222223578899999998
Q ss_pred eEEE-EecCCcEEEEeCCC-CceEE--------EecCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEE
Q 019006 198 KIYT-GGIDNDVKVWDLRK-GEVSM--------TLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKI 267 (347)
Q Consensus 198 ~l~~-~~~dg~i~iwd~~~-~~~~~--------~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~ 267 (347)
.++. .+.++.|++||+.+ +.... .+.++ ..+..++++++|+.+++...++.|.+||.. ...+..
T Consensus 195 ~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~-----g~~~~~ 268 (333)
T 2dg1_A 195 VLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDDNLYVAMYGQGRVLVFNKR-----GYPIGQ 268 (333)
T ss_dssp EEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTCCEEEEEETTTEEEEECTT-----SCEEEE
T ss_pred EEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCCceEECCCCCEEEEEcCCCEEEEECCC-----CCEEEE
Confidence 6654 45678999999863 32221 12222 357889999999988888778899999863 223333
Q ss_pred Eecccc--ccccceEEEEECCCCCEEEEeeCC
Q 019006 268 LEGHQH--NFEKNLLKCGWSPDGSKVTAGSSD 297 (347)
Q Consensus 268 ~~~~~~--~~~~~~~~~~~s~~g~~l~sgs~d 297 (347)
+..... .....+..++|+||+..|+.++.+
T Consensus 269 ~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 269 ILIPGRDEGHMLRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp EECTTGGGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred EEcCCCccccccCcceEEECCCCCEEEEEeCc
Confidence 332211 000146788899998887766655
No 190
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.70 E-value=1.9e-13 Score=126.30 Aligned_cols=272 Identities=13% Similarity=0.041 Sum_probs=185.5
Q ss_pred CCCCeEEEeeCCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEECC--CCceeeeeeccCcc
Q 019006 67 PAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVE--TGKQIKKMAEHNSF 144 (347)
Q Consensus 67 ~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~--~~~~~~~~~~~~~~ 144 (347)
|.+.++++...++.|.++|.... +....+.. ...+..+.|+|||+++++++.|+.|.+||+. +.+.+.++.... .
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~-~v~~~i~~-g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~-~ 241 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTY-EIKTVLDT-GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGS-E 241 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTC-CEEEEEEC-SSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCS-E
T ss_pred CCceEEEEeCCCCeEEEEECCCC-eEEEEEeC-CCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCC-C
Confidence 44567778888999999998643 33334432 2356789999999999999999999999996 777777665433 3
Q ss_pred eeEeecC----CCCCCEEEEEcCCCceEEEeCCCCCceeecCC------------CCceEEEEEcCCCCeEE-EEecCCc
Q 019006 145 VNSCCPS----RRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPD------------KYQITAVSFSDASDKIY-TGGIDND 207 (347)
Q Consensus 145 v~~~~~~----~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~~------------~~~v~~~~~~~~~~~l~-~~~~dg~ 207 (347)
...+.++ +++..++++...++++.++|..+.+.+..++. ...+..+..++++..++ ....+|.
T Consensus 242 P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~ 321 (567)
T 1qks_A 242 ARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGK 321 (567)
T ss_dssp EEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTE
T ss_pred CceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCe
Confidence 4456777 46666666677779999999988887766542 12567788888766544 4556789
Q ss_pred EEEEeCCCCce--EEEecCCCCceeEEEECCCCCEEEEEc-CCCcEEEEeCCCCCCcCceeEEEec-cccccccceEEEE
Q 019006 208 VKVWDLRKGEV--SMTLQGHQDMITGMSLSPDGSYLLTNG-MDCKLCIWDMRPYAPQNRCVKILEG-HQHNFEKNLLKCG 283 (347)
Q Consensus 208 i~iwd~~~~~~--~~~~~~~~~~i~~v~~~~~~~~l~t~~-~d~~i~~wd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 283 (347)
|.++|....+. ...+. ......++.|+|++++++++. .++.|.++|+... +....+.. ........... -
T Consensus 322 v~~vd~~~~~~~~v~~i~-~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~----kl~~~i~vgg~~Phpg~g~~-~ 395 (567)
T 1qks_A 322 ILLVDYTDLNNLKTTEIS-AERFLHDGGLDGSHRYFITAANARNKLVVIDTKEG----KLVAIEDTGGQTPHPGRGAN-F 395 (567)
T ss_dssp EEEEETTCSSEEEEEEEE-CCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTT----EEEEEEECSSSSBCCTTCEE-E
T ss_pred EEEEecCCCccceeeeee-ccccccCceECCCCCEEEEEeCCCCeEEEEECCCC----cEEEEEeccCcCCCCcccee-e
Confidence 99999876532 22222 234567899999999987655 5789999998743 33333332 11111111112 1
Q ss_pred ECCCCCEE-EEee-CCCeEEEEeCCC-------ceeeEEecCCccCeeeEEEcCCCCEEEEecC-------CCcEEeecC
Q 019006 284 WSPDGSKV-TAGS-SDRMVYIWDTTS-------RRILYKLPGHTGSVNESVFHATEPVIGSCSS-------DKQIYLGEI 347 (347)
Q Consensus 284 ~s~~g~~l-~sgs-~dg~i~vwd~~~-------~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~-------D~~i~i~~~ 347 (347)
++|++..+ +++. .++.|.++|..+ .+.+.+++.....-..++.||+++++..... ..+|.++|+
T Consensus 396 ~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~ 475 (567)
T 1qks_A 396 VHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDI 475 (567)
T ss_dssp EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEG
T ss_pred ECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEEC
Confidence 57875544 4443 568999999987 5677888766555566889999987765442 357888764
No 191
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.69 E-value=1.1e-14 Score=126.88 Aligned_cols=236 Identities=14% Similarity=0.134 Sum_probs=153.0
Q ss_pred ccEEEEEECCCCCeEEEeeCC---Cc--EEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEecCC-----------
Q 019006 58 SAVYTMKFNPAGTVIASGSHD---RD--IFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPD----------- 121 (347)
Q Consensus 58 ~~V~~v~~~~~~~~l~s~~~d---~~--v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d----------- 121 (347)
..+..++|+|+|+.||..+.+ +. |++|++.+. .. ..+..+.. +..+.|+|+|+.|+.++.+
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g-~~-~~l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~ 135 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETL-SS-KKILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFED 135 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTT-EE-EEEEEESE-EEEEEECTTSSEEEEEEECCCC--------
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCC-ce-EEEEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEc
Confidence 457789999999999887754 33 777777542 22 22333333 8999999999998887632
Q ss_pred ----------------CeEEEEECCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCC-------ceEEEeCCCCCce
Q 019006 122 ----------------KTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDG-------TAKLWDMRQRGAI 178 (347)
Q Consensus 122 ----------------g~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~-------~i~iwd~~~~~~~ 178 (347)
..|.+||+.+++.+..+.. . .+..+.+++++ +++++..+. ...+|.+.++...
T Consensus 136 ~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg--~~~~~~~~~~~~~~~~~~~l~~~d~~~~~ 211 (347)
T 2gop_A 136 DVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK--IVVNVPHREIIPQYFKFWDIYIWEDGKEE 211 (347)
T ss_dssp -CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE--EEEEEECCCSSCCSSCCEEEEEEETTEEE
T ss_pred ccceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe--EEEEEecccccccccccccEEEeCCCceE
Confidence 5689999988776344444 3 56667777766 666665542 3445544333322
Q ss_pred eecCCCCceEEEEEcCCCCeEEEEecC--------CcEEEEeCCCCceEEEecCCCCceeE-EEECCCCCEEEEEcCCCc
Q 019006 179 QTFPDKYQITAVSFSDASDKIYTGGID--------NDVKVWDLRKGEVSMTLQGHQDMITG-MSLSPDGSYLLTNGMDCK 249 (347)
Q Consensus 179 ~~~~~~~~v~~~~~~~~~~~l~~~~~d--------g~i~iwd~~~~~~~~~~~~~~~~i~~-v~~~~~~~~l~t~~~d~~ 249 (347)
....+ ..+.. ++|+++.++.++.+ ..|++|| +++.......+...+.. +.|+ ++ .+++++.++.
T Consensus 212 ~l~~~-~~~~~--~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~ 284 (347)
T 2gop_A 212 KMFEK-VSFYA--VDSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGS 284 (347)
T ss_dssp EEEEE-ESEEE--EEECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE-EEEEEEETTE
T ss_pred EeccC-cceee--ECCCCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc-EEEEEecCCc
Confidence 22222 33443 38999988876644 3688888 55554444556667886 8999 88 8889999999
Q ss_pred EEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEEEEeeCCCeE-EEEeCCCceeeEEecCCccCe
Q 019006 250 LCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMV-YIWDTTSRRILYKLPGHTGSV 321 (347)
Q Consensus 250 i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i-~vwd~~~~~~~~~~~~h~~~v 321 (347)
++|| +.. ........ + ...+..++|+| .++++++.++.. .+|.+. ++ ..++..|...+
T Consensus 285 ~~l~-~~~----g~~~~~~~-~----~~~v~~~~~s~--~~~~~~~~~~~~~~l~~~~-g~-~~~lt~~n~~~ 343 (347)
T 2gop_A 285 VNLY-IWD----GEIKPIAK-G----RHWIMGFDVDE--IVVYLKETATRLRELFTWD-GE-EKQLTDYNDPI 343 (347)
T ss_dssp EEEE-EES----SSEEEEEC-S----SSEEEEEEESS--SEEEEEECSSSCCEEEEES-SS-EEECCCTTSTT
T ss_pred EEEE-EcC----CceEEEec-C----CCeEEeeeeeC--cEEEEEcCCCChHHheEeC-Cc-EEEeccccHhH
Confidence 9999 862 22222222 1 34578889999 677777776654 666555 44 45666665543
No 192
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.69 E-value=6.1e-14 Score=121.52 Aligned_cols=253 Identities=11% Similarity=0.022 Sum_probs=171.9
Q ss_pred cEEEEEECCCCCeEEEeeCCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEECCCCceeeee
Q 019006 59 AVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKM 138 (347)
Q Consensus 59 ~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 138 (347)
....+.+. .+.++++...++.|.+||.... +....+. .......+++++++...++...++.|.+||..+++....+
T Consensus 45 ~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~-~~~~~i~-~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i 121 (328)
T 3dsm_A 45 VAQSMVIR-DGIGWIVVNNSHVIFAIDINTF-KEVGRIT-GFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYI 121 (328)
T ss_dssp CEEEEEEE-TTEEEEEEGGGTEEEEEETTTC-CEEEEEE-CCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEE
T ss_pred cceEEEEE-CCEEEEEEcCCCEEEEEECccc-EEEEEcC-CCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEE
Confidence 45667763 4556666777899999998633 3334443 2356788999888854444448999999999998877666
Q ss_pred eccC-----cceeEeecCCCCCCEEEEEc-CCCceEEEeCCCCCceeecCCCCceEEEEEcCCCCeEEEEecC-------
Q 019006 139 AEHN-----SFVNSCCPSRRGPPLVVSGS-DDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIYTGGID------- 205 (347)
Q Consensus 139 ~~~~-----~~v~~~~~~~~~~~~~~s~~-~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------- 205 (347)
.... .....++. .+..++++.. .+++|.++|+.+++.+..++.......+.++++++.++++..+
T Consensus 122 ~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~p~~i~~~~dG~l~v~~~~~~~~~~~~ 199 (328)
T 3dsm_A 122 ECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDELTIGIQPTSLVMDKYNKMWTITDGGYEGSPYG 199 (328)
T ss_dssp ECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEEEEECSSCBCCCEECTTSEEEEEBCCBCTTCSSC
T ss_pred EcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCCccceEEcCCCCEEEEECCCccCCccc
Confidence 5332 02223333 3344555554 4889999999988877777655566788999998866665544
Q ss_pred ---CcEEEEeCCCCceEEEecCC-CCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEeccccccccceEE
Q 019006 206 ---NDVKVWDLRKGEVSMTLQGH-QDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLK 281 (347)
Q Consensus 206 ---g~i~iwd~~~~~~~~~~~~~-~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (347)
+.|.++|..+++....+... ......++|+|++++|+++.. .|.+||....+.... ..+... ......
T Consensus 200 ~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~--~~~~~~----~~~p~g 271 (328)
T 3dsm_A 200 YEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVR--PFLEFR----DTKYYG 271 (328)
T ss_dssp BCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCCSS--CSBCCC----SSCEEE
T ss_pred cCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCCceeee--eeecCC----CCceEE
Confidence 78999999988876665432 235789999999999888765 899999865332111 011100 235778
Q ss_pred EEECC-CCCEEEEe----eCCCeEEEEeCCCceeeEEecCCccCeeeEEE
Q 019006 282 CGWSP-DGSKVTAG----SSDRMVYIWDTTSRRILYKLPGHTGSVNESVF 326 (347)
Q Consensus 282 ~~~s~-~g~~l~sg----s~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~ 326 (347)
++++| ++.+.++. ..++.|.+||.. ++.+.+++. ......++|
T Consensus 272 i~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~~~i~~-G~~P~~~~~ 319 (328)
T 3dsm_A 272 LTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLIDEFYV-GIIPGAFCW 319 (328)
T ss_dssp EEECTTTCCEEEEECTTSSSEEEEEEECTT-CCEEEEEEE-EESEEEEEE
T ss_pred EEEcCCCCeEEEEcccccccCCEEEEECCC-CCEEEEEEe-ccCcceEEE
Confidence 89999 55555666 678999999998 888877753 223355555
No 193
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.68 E-value=1.3e-14 Score=138.59 Aligned_cols=272 Identities=11% Similarity=0.025 Sum_probs=172.3
Q ss_pred CCCCeEEEeeCCC---cEEEEeccC-CCeeeEEE------eCcccceeEEEEcCCCCEEE-----EecCCCeEEEEECCC
Q 019006 67 PAGTVIASGSHDR---DIFLWHVHG-DCKNFMVL------KGHKNAILDLHWTTDGSQII-----SASPDKTLRAWDVET 131 (347)
Q Consensus 67 ~~~~~l~s~~~d~---~v~~w~~~~-~~~~~~~~------~~h~~~v~~~~~~~~~~~l~-----s~~~dg~i~iwd~~~ 131 (347)
|+|..++-...++ .-.+|.... .......+ .+|...+..++|||||++|+ .|+.+..|++||+.+
T Consensus 77 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~t 156 (695)
T 2bkl_A 77 RRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDS 156 (695)
T ss_dssp EETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTT
T ss_pred EECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCC
Confidence 6788777665543 244554431 11111222 24555789999999999998 444567899999999
Q ss_pred Ccee-eeeeccCcceeEeecCCCCCCEEEEEcCCCc-------------eEEEeCCCCCc----eeecCC-CCceEEEEE
Q 019006 132 GKQI-KKMAEHNSFVNSCCPSRRGPPLVVSGSDDGT-------------AKLWDMRQRGA----IQTFPD-KYQITAVSF 192 (347)
Q Consensus 132 ~~~~-~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~-------------i~iwd~~~~~~----~~~~~~-~~~v~~~~~ 192 (347)
++.+ ...... .....+.+++++. .|+.++.|.. |++|++.++.. +...+. ...+..+.|
T Consensus 157 g~~~~~~~~~~-~~~~~~~wspDg~-~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~ 234 (695)
T 2bkl_A 157 GEWSKVDVIEG-GKYATPKWTPDSK-GFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDL 234 (695)
T ss_dssp CCBCSSCCBSC-CTTCCCEECTTSS-EEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEE
T ss_pred CCCcCCcccCc-ccccceEEecCCC-EEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEE
Confidence 8764 211111 1114566777764 5666666665 99999987652 222222 246789999
Q ss_pred cCCCCeEEEEecCC----cEEEEeCCCCceEEEecCCCCceeEEEECCCCCEEEEEc---CCCcEEEEeCCCCCCcCcee
Q 019006 193 SDASDKIYTGGIDN----DVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNG---MDCKLCIWDMRPYAPQNRCV 265 (347)
Q Consensus 193 ~~~~~~l~~~~~dg----~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~---~d~~i~~wd~~~~~~~~~~~ 265 (347)
+|++++++..+.++ .|+++|..+++. ..+..+...+....+ +++..++... .++.|.+||+..... ....
T Consensus 235 SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~-~~l~~~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~-~~~~ 311 (695)
T 2bkl_A 235 SRDGKYLFVYILRGWSENDVYWKRPGEKDF-RLLVKGVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPAR-ASWK 311 (695)
T ss_dssp CTTSCCEEEEEEETTTEEEEEEECTTCSSC-EEEEECSSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSG-GGCE
T ss_pred CCCCCEEEEEEeCCCCceEEEEEcCCCCce-EEeecCCCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCc-cCCe
Confidence 99999998877665 678887655543 334444455566666 5666444444 257899999864321 0112
Q ss_pred EEEeccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCC-CceeeEEecCC-ccCeeeEEEcCCCCEEE----EecCC
Q 019006 266 KILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTT-SRRILYKLPGH-TGSVNESVFHATEPVIG----SCSSD 339 (347)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~-~~~~~~~~~~h-~~~v~~~~~~~~~~~l~----s~s~D 339 (347)
..+..+. ...+..++|+ ++.++++...|+..+||... .+..+..+..+ .+.+..++++|+++.++ +....
T Consensus 312 ~l~~~~~---~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P 387 (695)
T 2bkl_A 312 EIVPEDS---SASLLSVSIV-GGHLSLEYLKDATSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTP 387 (695)
T ss_dssp EEECCCS---SCEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEE
T ss_pred EEecCCC---CCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCC
Confidence 2222211 2345667777 77788899999988887554 35556667665 66788899999998777 44456
Q ss_pred CcEEeecC
Q 019006 340 KQIYLGEI 347 (347)
Q Consensus 340 ~~i~i~~~ 347 (347)
++|++||+
T Consensus 388 ~~v~~~d~ 395 (695)
T 2bkl_A 388 RQIYKTSV 395 (695)
T ss_dssp EEEEEEET
T ss_pred CEEEEEEC
Confidence 88998874
No 194
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.67 E-value=5.7e-14 Score=118.48 Aligned_cols=211 Identities=10% Similarity=0.068 Sum_probs=161.8
Q ss_pred CCCEEEEecCCCeEEEEECCCCceeeeeeccC-cceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeecCCC--Cce
Q 019006 111 DGSQIISASPDKTLRAWDVETGKQIKKMAEHN-SFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDK--YQI 187 (347)
Q Consensus 111 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~~~--~~v 187 (347)
.++.|++++.|+.|.+||.++++.+.++..+. ..+..+...+++ .+++ +.++.+..||. +++.+..+... ..+
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG-~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~ 79 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAG-EILF--SYSKGAKMITR-DGRELWNIAAPAGCEM 79 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTS-CEEE--ECBSEEEEECT-TSCEEEEEECCTTCEE
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCC-CEEE--eCCCCEEEECC-CCCEEEEEcCCCCccc
Confidence 45789999999999999999999998887665 355666666665 5666 45788999998 67777776543 478
Q ss_pred EEEEEcCCCCeEEEEec-CCcEEEEeCCCCceEEEec------CCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCC
Q 019006 188 TAVSFSDASDKIYTGGI-DNDVKVWDLRKGEVSMTLQ------GHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAP 260 (347)
Q Consensus 188 ~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~------~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~ 260 (347)
.++.+.++++.+++.+. ++.|..+|. .++.+.++. .+......+++.++|+++++...++.|..||..
T Consensus 80 ~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~---- 154 (276)
T 3no2_A 80 QTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN---- 154 (276)
T ss_dssp EEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT----
T ss_pred cccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC----
Confidence 88999999999998877 778888885 677665543 122245567889999999999999999999965
Q ss_pred cCceeEEEeccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCCceeeEEecCCc------cCeeeEEEcCCCCEEE
Q 019006 261 QNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHT------GSVNESVFHATEPVIG 334 (347)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~------~~v~~~~~~~~~~~l~ 334 (347)
++.+..+... .....+...++|..+++++.++.|..+|..+++.+.++..+. ..+..+...+++.+++
T Consensus 155 -G~~~w~~~~~-----~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v 228 (276)
T 3no2_A 155 -GQLLNSVKLS-----GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYI 228 (276)
T ss_dssp -SCEEEEEECS-----SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEE
T ss_pred -CCEEEEEECC-----CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEE
Confidence 2334444432 234456678999999999999999999999999999886543 1267888899998888
Q ss_pred Ee
Q 019006 335 SC 336 (347)
Q Consensus 335 s~ 336 (347)
+.
T Consensus 229 ~~ 230 (276)
T 3no2_A 229 CN 230 (276)
T ss_dssp EE
T ss_pred Ee
Confidence 77
No 195
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.67 E-value=4.1e-15 Score=131.87 Aligned_cols=232 Identities=12% Similarity=0.073 Sum_probs=148.7
Q ss_pred eeEEEEcCCCCEEEEecCC---CeEEEEECCCCceeeeeeccCccee-EeecCCCCCCEEEEEcCCCceEEEeCCCCCce
Q 019006 103 ILDLHWTTDGSQIISASPD---KTLRAWDVETGKQIKKMAEHNSFVN-SCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAI 178 (347)
Q Consensus 103 v~~~~~~~~~~~l~s~~~d---g~i~iwd~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~ 178 (347)
+..++|+|+|++|+.+..+ ..|.+||+.+++... +..+..... ...+++++ ..++..+.++.+++||+.++...
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~-l~~~~~~~~~~~~~spdg-~~l~~~~~~~~l~~~d~~~~~~~ 115 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQ-LTEGKGDNTFGGFISTDE-RAFFYVKNELNLMKVDLETLEEQ 115 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEE-CCCSSCBCTTTCEECTTS-SEEEEEETTTEEEEEETTTCCEE
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEE-eecCCCCccccceECCCC-CEEEEEEcCCcEEEEECCCCCcE
Confidence 6778899999998776443 468888988876533 322222222 24456665 46667777889999999877654
Q ss_pred eecCCC-CceEE-------------------EEEcCCCCeEEEE-----ecCCcEEEEeCCCCceEEEecCCCCceeEEE
Q 019006 179 QTFPDK-YQITA-------------------VSFSDASDKIYTG-----GIDNDVKVWDLRKGEVSMTLQGHQDMITGMS 233 (347)
Q Consensus 179 ~~~~~~-~~v~~-------------------~~~~~~~~~l~~~-----~~dg~i~iwd~~~~~~~~~~~~~~~~i~~v~ 233 (347)
...... ..... ..++|+++.++.. ..+..|++||+.+++..... .+...+..+.
T Consensus 116 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~-~~~~~~~~~~ 194 (396)
T 3c5m_A 116 VIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIH-QDTAWLGHPI 194 (396)
T ss_dssp EEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEE-EESSCEEEEE
T ss_pred EEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeec-cCCcccccce
Confidence 433321 11111 2456777766543 35568999999887754443 4556788999
Q ss_pred ECC-CCCEEEEEcCC------CcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEEEEeeCC-----CeEE
Q 019006 234 LSP-DGSYLLTNGMD------CKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSD-----RMVY 301 (347)
Q Consensus 234 ~~~-~~~~l~t~~~d------~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~d-----g~i~ 301 (347)
|+| +++.|+..+.+ ..|.+||+.... ...+..+. ....+..++|+|||++|+.++.+ +.|+
T Consensus 195 ~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~-----~~~l~~~~--~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~ 267 (396)
T 3c5m_A 195 YRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSN-----VRKIKEHA--EGESCTHEFWIPDGSAMAYVSYFKGQTDRVIY 267 (396)
T ss_dssp EETTEEEEEEEEECSCSSSCSCCCEEEETTSCC-----CEESSCCC--TTEEEEEEEECTTSSCEEEEEEETTTCCEEEE
T ss_pred ECCCCCCEEEEEecCCCCCCCceEEEEECCCCc-----eeEeeccC--CCccccceEECCCCCEEEEEecCCCCccceEE
Confidence 999 78877665543 368888875321 11121111 01246778999999988777543 4599
Q ss_pred EEeCCCceeeEEecCCccCeeeEEEcC-CCCEEEEec----------------CCCcEEeecC
Q 019006 302 IWDTTSRRILYKLPGHTGSVNESVFHA-TEPVIGSCS----------------SDKQIYLGEI 347 (347)
Q Consensus 302 vwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~s----------------~D~~i~i~~~ 347 (347)
+||+.+++...... ..+ .. +.|+| +++++++++ .+..|++||+
T Consensus 268 ~~d~~~g~~~~l~~-~~~-~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~ 327 (396)
T 3c5m_A 268 KANPETLENEEVMV-MPP-CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNT 327 (396)
T ss_dssp EECTTTCCEEEEEE-CCS-EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEET
T ss_pred EEECCCCCeEEeee-CCC-CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEec
Confidence 99998876543221 111 22 88999 999888765 3467888874
No 196
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.64 E-value=4.3e-13 Score=113.08 Aligned_cols=245 Identities=11% Similarity=0.067 Sum_probs=171.6
Q ss_pred CCCeEEEeeCCCcEEEEeccCCCeeeEEEeCcc-cceeEEEEcCCCCEEEEecCCCeEEEEECCCCceeeeeeccC-cce
Q 019006 68 AGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHK-NAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHN-SFV 145 (347)
Q Consensus 68 ~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~~v 145 (347)
.+++|++++.|+.|++||.. +.+....+..+. ..+.++.++|+|++++ +.++.|..||. +++.+.++.... ..+
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~-tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~ 79 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKD-TKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEM 79 (276)
T ss_dssp CCEEEEECTTCSEEEEEETT-TTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEE
T ss_pred CCcEEEeeCCCCEEEEEECC-CCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCccc
Confidence 46889999999999999984 234555666655 4688999999999888 35788999998 788888887642 355
Q ss_pred eEeecCCCCCCEEEEEcC-CCceEEEeCCCCCceeecCC-------CCceEEEEEcCCCCeEEEEecCCcEEEEeCCCCc
Q 019006 146 NSCCPSRRGPPLVVSGSD-DGTAKLWDMRQRGAIQTFPD-------KYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGE 217 (347)
Q Consensus 146 ~~~~~~~~~~~~~~s~~~-d~~i~iwd~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 217 (347)
..+.+.+++ .++++.+. ++++..+|. .++.+..+.. ......+.+.++++++++...++.|..||.. ++
T Consensus 80 ~~~~~~~dG-~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~ 156 (276)
T 3no2_A 80 QTARILPDG-NALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQ 156 (276)
T ss_dssp EEEEECTTS-CEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SC
T ss_pred cccEECCCC-CEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CC
Confidence 566666665 46666665 677777775 4554444321 1124456778899999999999999999987 99
Q ss_pred eEEEecCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEeccccc--cccceEEEEECCCCCEEEEee
Q 019006 218 VSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHN--FEKNLLKCGWSPDGSKVTAGS 295 (347)
Q Consensus 218 ~~~~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~s~~g~~l~sgs 295 (347)
.+.++... ....++.+.++++.++++..++.|..+|..+ ++.+..+...... ....+..++..++|..+++.+
T Consensus 157 ~~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~t----G~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 157 LLNSVKLS-GTPFSSAFLDNGDCLVACGDAHCFVQLNLES----NRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp EEEEEECS-SCCCEEEECTTSCEEEECBTTSEEEEECTTT----CCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEE
T ss_pred EEEEEECC-CCccceeEcCCCCEEEEeCCCCeEEEEeCcC----CcEEEEecCCCCCCccccccccceEcCCCCEEEEec
Confidence 88888764 3466788889999999988888999999764 3344444322110 112366778889999998874
Q ss_pred CC--------CeEEEEeC-CCceeeEEecCCc--cCeeeE
Q 019006 296 SD--------RMVYIWDT-TSRRILYKLPGHT--GSVNES 324 (347)
Q Consensus 296 ~d--------g~i~vwd~-~~~~~~~~~~~h~--~~v~~~ 324 (347)
.. +..+++.+ .+++++.++..+. +.+..+
T Consensus 232 ~g~~~~~~~~~~~~~~~~~~~g~~~W~~~~~~~~~~~~~~ 271 (276)
T 3no2_A 232 QGHDREAGKGKHPQLVEIDSEGKVVWQLNDKVKFGMISTI 271 (276)
T ss_dssp CTTCTTGGGSCCCSEEEECTTSBEEEEECCTTTSCCCCEE
T ss_pred cCccccccccCCceEEEECCCCCEEEEecCcccccceeee
Confidence 21 23355555 4778887776554 344443
No 197
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.64 E-value=1.8e-13 Score=131.63 Aligned_cols=270 Identities=13% Similarity=0.035 Sum_probs=167.6
Q ss_pred CCCCeEEEeeCCCc---EEEEeccCC----CeeeEEE------eCcccceeEEEEcCCCCEEEEecCC-----CeEEEEE
Q 019006 67 PAGTVIASGSHDRD---IFLWHVHGD----CKNFMVL------KGHKNAILDLHWTTDGSQIISASPD-----KTLRAWD 128 (347)
Q Consensus 67 ~~~~~l~s~~~d~~---v~~w~~~~~----~~~~~~~------~~h~~~v~~~~~~~~~~~l~s~~~d-----g~i~iwd 128 (347)
|+|+.++-...++. -.+|..... ......+ .+|...+..++|||||++|+.++.+ ..|++||
T Consensus 116 pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~d 195 (741)
T 1yr2_A 116 RRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVG 195 (741)
T ss_dssp EETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEE
T ss_pred EECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEE
Confidence 78988776655443 455654321 1111111 2344468889999999999876543 4699999
Q ss_pred CCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCC--------------ceEEEeCCCCCc--eeecC--CC-CceEE
Q 019006 129 VETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDG--------------TAKLWDMRQRGA--IQTFP--DK-YQITA 189 (347)
Q Consensus 129 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~--------------~i~iwd~~~~~~--~~~~~--~~-~~v~~ 189 (347)
+.+++.+.... +...+..+.++++ .. |+.++.++ .|++|++.++.. ...+. .. ..+..
T Consensus 196 l~tg~~~~~~~-~~~~~~~~~wspD-~~-l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~ 272 (741)
T 1yr2_A 196 VADGKPLADEL-KWVKFSGLAWLGN-DA-LLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHG 272 (741)
T ss_dssp TTTCCEEEEEE-EEEESCCCEESTT-SE-EEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEE
T ss_pred CCCCCCCCccC-CCceeccEEEECC-CE-EEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEE
Confidence 99987654321 1122234667776 44 44444444 388899876542 12222 21 24788
Q ss_pred EEEcCCCCeEEEEecCC-----cEEEEeCCCC--ceEEEecCCCCceeEEEECCCCCEEEEEcCC----CcEEEEeCCCC
Q 019006 190 VSFSDASDKIYTGGIDN-----DVKVWDLRKG--EVSMTLQGHQDMITGMSLSPDGSYLLTNGMD----CKLCIWDMRPY 258 (347)
Q Consensus 190 ~~~~~~~~~l~~~~~dg-----~i~iwd~~~~--~~~~~~~~~~~~i~~v~~~~~~~~l~t~~~d----~~i~~wd~~~~ 258 (347)
+.|+|++++++..+.++ .|++||+.++ +....+..+...+.... +|+|+.|+..+.+ +.|.+||+...
T Consensus 273 ~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~-~~dg~~l~~~s~~~~~~~~l~~~d~~~~ 351 (741)
T 1yr2_A 273 ASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDFV-DGVGDQLWFVSGDGAPLKKIVRVDLSGS 351 (741)
T ss_dssp EEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEEE-EEETTEEEEEECTTCTTCEEEEEECSSS
T ss_pred EEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEEE-eccCCEEEEEECCCCCCCEEEEEeCCCC
Confidence 99999999888776543 7999999876 31344544544455443 4888888877653 45999998642
Q ss_pred CCcCceeEEEeccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCC-CceeeEEecCC-ccCeeeEEEcCCCCEEE--
Q 019006 259 APQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTT-SRRILYKLPGH-TGSVNESVFHATEPVIG-- 334 (347)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~-~~~~~~~~~~h-~~~v~~~~~~~~~~~l~-- 334 (347)
. ......+..+ ...+..++|+ ++.++++...|+..+||... .+..+..+..+ .+.+..+.++|+++.++
T Consensus 352 ~--~~~~~l~~~~----~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~ 424 (741)
T 1yr2_A 352 T--PRFDTVVPES----KDNLESVGIA-GNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLS 424 (741)
T ss_dssp S--CEEEEEECCC----SSEEEEEEEE-BTEEEEEEEETTEEEEEEEETTSCEEEECBCSSSCEEEEEECCBTCSCEEEE
T ss_pred c--cccEEEecCC----CCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCceeeccCCCCeEEEEeecCCCCCEEEEE
Confidence 1 1222333322 1235566676 56778888889887776543 35556666653 66788999999988666
Q ss_pred --EecCCCcEEeecC
Q 019006 335 --SCSSDKQIYLGEI 347 (347)
Q Consensus 335 --s~s~D~~i~i~~~ 347 (347)
+....++|++||+
T Consensus 425 ~ss~~~P~~i~~~d~ 439 (741)
T 1yr2_A 425 FSSFTQPATVLALDP 439 (741)
T ss_dssp EEETTEEEEEEEEET
T ss_pred EcCCCCCCEEEEEEC
Confidence 3345578888874
No 198
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.62 E-value=1.1e-12 Score=112.62 Aligned_cols=240 Identities=11% Similarity=0.113 Sum_probs=160.7
Q ss_pred ccceeEEEEcCCCCEEEE-------ecCCCeEEEEECCCCceeeeeec-----cCcceeEeecCCCCCCEEEEEcCCCce
Q 019006 100 KNAILDLHWTTDGSQIIS-------ASPDKTLRAWDVETGKQIKKMAE-----HNSFVNSCCPSRRGPPLVVSGSDDGTA 167 (347)
Q Consensus 100 ~~~v~~~~~~~~~~~l~s-------~~~dg~i~iwd~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~~~~s~~~d~~i 167 (347)
-....+++|++++..+++ ...++.|.+||..+++... +.. +...+..+++.+++..++++.. .+.|
T Consensus 17 ~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~-~~~l 94 (314)
T 1pjx_A 17 IPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTV-ICKPEVNGYGGIPAGCQCDRDANQLFVADM-RLGL 94 (314)
T ss_dssp CTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEE-EECCEETTEECCEEEEEECSSSSEEEEEET-TTEE
T ss_pred CCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEE-EEecccCCCCCCCceEEEecCCCcEEEEEC-CCCE
Confidence 345678999999988877 5778999999987776532 222 3344566666665234555443 4478
Q ss_pred EEEeCCCCCceee-cCC-----CCceEEEEEcCCCCeEEEEecC---------------CcEEEEeCCCCceEEEecCCC
Q 019006 168 KLWDMRQRGAIQT-FPD-----KYQITAVSFSDASDKIYTGGID---------------NDVKVWDLRKGEVSMTLQGHQ 226 (347)
Q Consensus 168 ~iwd~~~~~~~~~-~~~-----~~~v~~~~~~~~~~~l~~~~~d---------------g~i~iwd~~~~~~~~~~~~~~ 226 (347)
.+||.. ++.... ... ...+..+++++++...++...+ +.|..||.. ++.... ..+.
T Consensus 95 ~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~-~~~~ 171 (314)
T 1pjx_A 95 LVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQV-DTAF 171 (314)
T ss_dssp EEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEE-EEEE
T ss_pred EEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEe-ccCC
Confidence 899987 544322 211 1347899999998877666554 567888765 543332 2233
Q ss_pred CceeEEEEC----CCCCEEEEE-cCCCcEEEEeCCC-CCCcC-ceeEEEeccccccccceEEEEECCCCCEEEEeeCCCe
Q 019006 227 DMITGMSLS----PDGSYLLTN-GMDCKLCIWDMRP-YAPQN-RCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRM 299 (347)
Q Consensus 227 ~~i~~v~~~----~~~~~l~t~-~~d~~i~~wd~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~ 299 (347)
.....++|+ |+++.++.+ ..++.|.+||... ..... .....+..+. ......++++++|.++++...++.
T Consensus 172 ~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~---~~~p~~i~~d~~G~l~v~~~~~~~ 248 (314)
T 1pjx_A 172 QFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTH---EGGADGMDFDEDNNLLVANWGSSH 248 (314)
T ss_dssp SSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCS---SCEEEEEEEBTTCCEEEEEETTTE
T ss_pred CCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCC---CCCCCceEECCCCCEEEEEcCCCE
Confidence 446889999 998765544 5678999999752 11000 0111111110 034667889999999988888899
Q ss_pred EEEEeCCCceeeEEecCCccCeeeEEEcCCCC-EEEEecCCCcEEeecC
Q 019006 300 VYIWDTTSRRILYKLPGHTGSVNESVFHATEP-VIGSCSSDKQIYLGEI 347 (347)
Q Consensus 300 i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~s~D~~i~i~~~ 347 (347)
|.+||..+++.+..+..+...+..++|+|++. +.++...++.|..+++
T Consensus 249 i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~ 297 (314)
T 1pjx_A 249 IEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEW 297 (314)
T ss_dssp EEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEEC
T ss_pred EEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeC
Confidence 99999987877777777778899999999998 6666667788888763
No 199
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.62 E-value=1.3e-11 Score=108.53 Aligned_cols=271 Identities=8% Similarity=-0.030 Sum_probs=173.8
Q ss_pred CCCCCeEEEeeC--CC---cEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEec----------CCCeEEEEECC
Q 019006 66 NPAGTVIASGSH--DR---DIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISAS----------PDKTLRAWDVE 130 (347)
Q Consensus 66 ~~~~~~l~s~~~--d~---~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~----------~dg~i~iwd~~ 130 (347)
.|+++.+.+... .. .|.++|... .+....+.....+ .++++||+++++.+. .++.|.+||..
T Consensus 29 ~~~~~~~yv~~~~~~~~~~~v~v~D~~t-~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~ 105 (373)
T 2mad_H 29 GADGRRSYINLPAHHSAIIQQWVLDAGS-GSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPV 105 (373)
T ss_pred CCCCCEEEEeCCcccCCccEEEEEECCC-CeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECC
Confidence 356666655543 22 788998853 3333444433333 899999999998875 36789999999
Q ss_pred CCceeeeeecc-------CcceeEeecCCCCCCEEEEEcC-CCceEEEeCCCCCceee-cCCCCceEEEEEcCCC-CeEE
Q 019006 131 TGKQIKKMAEH-------NSFVNSCCPSRRGPPLVVSGSD-DGTAKLWDMRQRGAIQT-FPDKYQITAVSFSDAS-DKIY 200 (347)
Q Consensus 131 ~~~~~~~~~~~-------~~~v~~~~~~~~~~~~~~s~~~-d~~i~iwd~~~~~~~~~-~~~~~~v~~~~~~~~~-~~l~ 200 (347)
+.+.+..+... ......+.+++++..++++... ++.|.++| .+++.+.. ++.... +.+.+++ ..++
T Consensus 106 t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~~---~~~~~~~~~~~~ 181 (373)
T 2mad_H 106 TFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPTC---YHIHPGAPSTFY 181 (373)
T ss_pred CCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCce---EEEEeCCCceEE
Confidence 88777665432 1223356677777655554433 58899999 98888777 655432 3444554 3456
Q ss_pred EEecCCcEEEEeCCCCceEEEec-----CCCCc-eeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEeccc--
Q 019006 201 TGGIDNDVKVWDLRKGEVSMTLQ-----GHQDM-ITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQ-- 272 (347)
Q Consensus 201 ~~~~dg~i~iwd~~~~~~~~~~~-----~~~~~-i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~-- 272 (347)
+.+.||.+.++|. +++...... ....+ .....+.+++..++..+.++.+.+.|+..... .....+....
T Consensus 182 ~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~--~v~~~~~~~~~~ 258 (373)
T 2mad_H 182 LLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGA--TNKAPIDALSGG 258 (373)
T ss_pred EEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcc--eEeeeeeecCCc
Confidence 6778999999999 776553221 11111 12245566655544445678899999863211 1111111000
Q ss_pred ---cc-cccceEEEEECCCCCEEEEeeC----------CCeEEEEeCCCceeeEEecCCccCeeeEEEcCCCC-EEEEec
Q 019006 273 ---HN-FEKNLLKCGWSPDGSKVTAGSS----------DRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEP-VIGSCS 337 (347)
Q Consensus 273 ---~~-~~~~~~~~~~s~~g~~l~sgs~----------dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~s 337 (347)
.. .......+.++||++.|+++.. ++.|.++|..+++.+.+++. ......++|+|+++ ++.++.
T Consensus 259 ~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~-g~~p~~i~~s~Dg~~~l~v~~ 337 (373)
T 2mad_H 259 RKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISL-GHDVDAISVAQDGGPDLYALS 337 (373)
T ss_pred ccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEEC-CCCcCeEEECCCCCeEEEEEc
Confidence 00 0112334678999998887653 35899999999999988863 33689999999999 777776
Q ss_pred -CCCcEEeecC
Q 019006 338 -SDKQIYLGEI 347 (347)
Q Consensus 338 -~D~~i~i~~~ 347 (347)
.++.|.++|.
T Consensus 338 ~~~~~V~ViD~ 348 (373)
T 2mad_H 338 AGTEVLHIYDA 348 (373)
T ss_pred CCCCeEEEEEC
Confidence 5899999874
No 200
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.60 E-value=2.1e-13 Score=131.14 Aligned_cols=244 Identities=11% Similarity=0.097 Sum_probs=153.1
Q ss_pred CccccEEEEEECCCCCeEEEeeCC-----CcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEecCCCe------
Q 019006 55 GHQSAVYTMKFNPAGTVIASGSHD-----RDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKT------ 123 (347)
Q Consensus 55 ~h~~~V~~v~~~~~~~~l~s~~~d-----~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~------ 123 (347)
+|...+..++|||||++||.++.+ ..|++||+.+... .....+...+..++|+|| +.|+.++.|+.
T Consensus 160 ~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~--~~~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~ 236 (741)
T 1yr2_A 160 DGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKP--LADELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAF 236 (741)
T ss_dssp ---EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCE--EEEEEEEEESCCCEESTT-SEEEEEECCCC------
T ss_pred CCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCC--CCccCCCceeccEEEECC-CEEEEEEecCccccccc
Confidence 454578899999999998876554 4599999965432 112112222357899999 98888876654
Q ss_pred --------EEEEECCCCce----eeeeeccCcceeEeecCCCCCCEEEEEcC----CCceEEEeCCCC--C-ceeecCCC
Q 019006 124 --------LRAWDVETGKQ----IKKMAEHNSFVNSCCPSRRGPPLVVSGSD----DGTAKLWDMRQR--G-AIQTFPDK 184 (347)
Q Consensus 124 --------i~iwd~~~~~~----~~~~~~~~~~v~~~~~~~~~~~~~~s~~~----d~~i~iwd~~~~--~-~~~~~~~~ 184 (347)
|++|++.++.. +.....+...+....+++++..++++... ...|.+||+.++ . ........
T Consensus 237 ~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~ 316 (741)
T 1yr2_A 237 QALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDL 316 (741)
T ss_dssp --CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSS
T ss_pred ccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCC
Confidence 88999877652 22222222346677788877655544432 347899998765 3 33333333
Q ss_pred CceEEEEEcCCCCeEEEEecC----CcEEEEeCCCC--ceEEEecCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCC
Q 019006 185 YQITAVSFSDASDKIYTGGID----NDVKVWDLRKG--EVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPY 258 (347)
Q Consensus 185 ~~v~~~~~~~~~~~l~~~~~d----g~i~iwd~~~~--~~~~~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~ 258 (347)
...... ++++++.|+..+.+ +.|.+||+.++ .....+..+...+..+++. ++..+++...|+..+||.+..
T Consensus 317 ~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~- 393 (741)
T 1yr2_A 317 KAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAFDL- 393 (741)
T ss_dssp SSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEET-
T ss_pred CceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeC-
Confidence 233333 34788888877653 45999998874 3334445555567778887 566778888888877776542
Q ss_pred CCcCceeEEEeccccccccceEEEEECCCCCEEEEe----eCCCeEEEEeCCCce
Q 019006 259 APQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAG----SSDRMVYIWDTTSRR 309 (347)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sg----s~dg~i~vwd~~~~~ 309 (347)
.......+... ....+..++++|+++.|+.. ...+.|++||+.+++
T Consensus 394 --~g~~~~~l~~~---~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 443 (741)
T 1yr2_A 394 --DGKPAGAVSLP---GIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAK 443 (741)
T ss_dssp --TSCEEEECBCS---SSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTE
T ss_pred --CCCceeeccCC---CCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 12222333211 12457778899999866632 234789999998876
No 201
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.60 E-value=1.9e-11 Score=103.71 Aligned_cols=236 Identities=11% Similarity=0.004 Sum_probs=165.2
Q ss_pred CcccceeEEEEcCCCCEEEEecCCCeEEEEECCCCceeeeee--ccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCC
Q 019006 98 GHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMA--EHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQR 175 (347)
Q Consensus 98 ~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~ 175 (347)
.+...+.+++++++|+.+++...++.|.+||.. ++.. .+. .....+..++..+.+ .++++...++.|..||....
T Consensus 12 ~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~-~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~~~~g~ 88 (299)
T 2z2n_A 12 NQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKIT-EYPLPTPDAKVMCLTISSDG-EVWFTENAANKIGRITKKGI 88 (299)
T ss_dssp SSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEE-EEECSSTTCCEEEEEECTTS-CEEEEETTTTEEEEECTTSC
T ss_pred CcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeE-EecCCcccCceeeEEECCCC-CEEEeCCCCCeEEEECCCCc
Confidence 444678999999999988877778999999987 5432 222 233456666666554 56676666888999997622
Q ss_pred CceeecC-CCCceEEEEEcCCCCeEEEEecCCcEEEEeCCCCceEE-EecCCCCceeEEEECCCCCEEEEEcCCCcEEEE
Q 019006 176 GAIQTFP-DKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSM-TLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIW 253 (347)
Q Consensus 176 ~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~-~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~w 253 (347)
......+ ....+..+++++++..+++...++.|..||. +++... ....+...+..+++.++++..++...++.|..|
T Consensus 89 ~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~ 167 (299)
T 2z2n_A 89 IKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRI 167 (299)
T ss_dssp EEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEE
T ss_pred EEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEE
Confidence 1111222 3346889999998877777767889999998 554332 233344568999999999888877777899999
Q ss_pred eCCCCCCcCceeEEEeccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCCceeeE-EecCCccCeeeEEEcCCCCE
Q 019006 254 DMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILY-KLPGHTGSVNESVFHATEPV 332 (347)
Q Consensus 254 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~~-~~~~h~~~v~~~~~~~~~~~ 332 (347)
|. .. ... .+.... ....+..++++++|.+.++...++.|++||. +++... .++.+...+..+++++++.+
T Consensus 168 ~~-~g----~~~-~~~~~~--~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l 238 (299)
T 2z2n_A 168 TE-SG----DIT-EFKIPT--PASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITAGAGIDL 238 (299)
T ss_dssp CT-TC----CEE-EEECSS--TTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCE
T ss_pred cC-CC----cEE-EeeCCC--CCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEEECCCCCE
Confidence 87 32 111 111111 1235678899999998887777889999999 665432 34445677899999999998
Q ss_pred EEEecCCCcEEeec
Q 019006 333 IGSCSSDKQIYLGE 346 (347)
Q Consensus 333 l~s~s~D~~i~i~~ 346 (347)
.++...++.|..+|
T Consensus 239 ~v~~~~~~~i~~~d 252 (299)
T 2z2n_A 239 WFTEWGANKIGRLT 252 (299)
T ss_dssp EEEETTTTEEEEEE
T ss_pred EEeccCCceEEEEC
Confidence 88877778888776
No 202
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.60 E-value=4.4e-12 Score=108.74 Aligned_cols=240 Identities=12% Similarity=0.120 Sum_probs=157.1
Q ss_pred cCccccEEEEEECCCCCeEEE-------eeCCCcEEEEeccCCCeeeEEEe-----CcccceeEEEEcCC-CCEEEEecC
Q 019006 54 TGHQSAVYTMKFNPAGTVIAS-------GSHDRDIFLWHVHGDCKNFMVLK-----GHKNAILDLHWTTD-GSQIISASP 120 (347)
Q Consensus 54 ~~h~~~V~~v~~~~~~~~l~s-------~~~d~~v~~w~~~~~~~~~~~~~-----~h~~~v~~~~~~~~-~~~l~s~~~ 120 (347)
.+.-....+++|+++|.++++ +..++.|.+|+..+... ..+. ++...+.+++++++ ++++++..
T Consensus 14 ~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~--~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~- 90 (314)
T 1pjx_A 14 TEDIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKK--TVICKPEVNGYGGIPAGCQCDRDANQLFVADM- 90 (314)
T ss_dssp ECCCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCE--EEEECCEETTEECCEEEEEECSSSSEEEEEET-
T ss_pred hccCCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcE--EEEEecccCCCCCCCceEEEecCCCcEEEEEC-
Confidence 344456789999999998888 67889999999643222 2222 25567899999999 66555544
Q ss_pred CCeEEEEECCCCceeee-eec----cCcceeEeecCCCCCCEEEEEcCC---------------CceEEEeCCCCCceee
Q 019006 121 DKTLRAWDVETGKQIKK-MAE----HNSFVNSCCPSRRGPPLVVSGSDD---------------GTAKLWDMRQRGAIQT 180 (347)
Q Consensus 121 dg~i~iwd~~~~~~~~~-~~~----~~~~v~~~~~~~~~~~~~~s~~~d---------------~~i~iwd~~~~~~~~~ 180 (347)
+..|.+||.+ ++.... ... ....+..+++.+.+ .+.++...+ +.|..+|.. +.....
T Consensus 91 ~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g-~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~ 167 (314)
T 1pjx_A 91 RLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEG-NLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQV 167 (314)
T ss_dssp TTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTS-CEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEE
T ss_pred CCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCC-CEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEe
Confidence 4478899988 654322 111 11235567776655 466655444 466677765 333322
Q ss_pred cCCCCceEEEEEc----CCCCeEEEE-ecCCcEEEEeCC-CCc-----eEEEecCCC-CceeEEEECCCCCEEEEEcCCC
Q 019006 181 FPDKYQITAVSFS----DASDKIYTG-GIDNDVKVWDLR-KGE-----VSMTLQGHQ-DMITGMSLSPDGSYLLTNGMDC 248 (347)
Q Consensus 181 ~~~~~~v~~~~~~----~~~~~l~~~-~~dg~i~iwd~~-~~~-----~~~~~~~~~-~~i~~v~~~~~~~~l~t~~~d~ 248 (347)
.........++++ ++++.++.+ ..++.|.+||.. .++ ....+..+. ..+..++++++|+.+++...++
T Consensus 168 ~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~ 247 (314)
T 1pjx_A 168 DTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSS 247 (314)
T ss_dssp EEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTT
T ss_pred ccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCC
Confidence 2222346788899 988766655 567899999976 343 222334443 5678899999999888887788
Q ss_pred cEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEEE-EeeCCCeEEEEeCCC
Q 019006 249 KLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVT-AGSSDRMVYIWDTTS 307 (347)
Q Consensus 249 ~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~-sgs~dg~i~vwd~~~ 307 (347)
.|.+||.... .....+..+ ...+..++|+|+|+.|. +...++.|..|++..
T Consensus 248 ~i~~~d~~~g----~~~~~~~~~----~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 248 HIEVFGPDGG----QPKMRIRCP----FEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp EEEEECTTCB----SCSEEEECS----SSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred EEEEEcCCCC----cEeEEEeCC----CCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 9999997632 222233222 14578899999999554 555678999999864
No 203
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.57 E-value=2.9e-11 Score=106.32 Aligned_cols=237 Identities=8% Similarity=-0.042 Sum_probs=156.2
Q ss_pred EEEECCCCCeEEEee----------CCCcEEEEeccCCCeeeEEEeCc-------ccceeEEEEcCCCCEEEEecC--CC
Q 019006 62 TMKFNPAGTVIASGS----------HDRDIFLWHVHGDCKNFMVLKGH-------KNAILDLHWTTDGSQIISASP--DK 122 (347)
Q Consensus 62 ~v~~~~~~~~l~s~~----------~d~~v~~w~~~~~~~~~~~~~~h-------~~~v~~~~~~~~~~~l~s~~~--dg 122 (347)
.+.++|+|+.|+++. .++.|.+||... .+....+.-. ...-..+.|+|||++|+.+.. ++
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t-~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~ 148 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVT-FLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGP 148 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCC-CcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCC
Confidence 889999999998875 367899999853 2222222111 122357899999999998874 47
Q ss_pred eEEEEECCCCceeee-eeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeecC------CCCc-eEEEEEcC
Q 019006 123 TLRAWDVETGKQIKK-MAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFP------DKYQ-ITAVSFSD 194 (347)
Q Consensus 123 ~i~iwd~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~------~~~~-v~~~~~~~ 194 (347)
.|.++| .+++.+.. +..... ....+.+...+++.+.||++.++|. +++...... .... .....+.+
T Consensus 149 ~v~viD-~t~~~~~~~i~~~~~----~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~ 222 (373)
T 2mad_H 149 AVGLVV-QGGSSDDQLLSSPTC----YHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQAN 222 (373)
T ss_pred eEEEEE-CCCCEEeEEcCCCce----EEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEe
Confidence 899999 99887766 533221 2223444556777889999999999 666552211 1111 12234556
Q ss_pred CCCeEEEEecCCcEEEEeCCCCce--EEEecCC----------CCceeEEEECCCCCEEEEEcC----------CCcEEE
Q 019006 195 ASDKIYTGGIDNDVKVWDLRKGEV--SMTLQGH----------QDMITGMSLSPDGSYLLTNGM----------DCKLCI 252 (347)
Q Consensus 195 ~~~~l~~~~~dg~i~iwd~~~~~~--~~~~~~~----------~~~i~~v~~~~~~~~l~t~~~----------d~~i~~ 252 (347)
++..++..+..+.+.+.|+..... ...+... ......+.++|+++.++.... .+.|.+
T Consensus 223 ~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~V 302 (373)
T 2mad_H 223 KSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTS 302 (373)
T ss_pred cCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEE
Confidence 666555555778999999865432 1222110 122334788999888777543 357999
Q ss_pred EeCCCCCCcCceeEEEeccccccccceEEEEECCCCC-EEEEee-CCCeEEEEeCCCceeeEEe
Q 019006 253 WDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGS-KVTAGS-SDRMVYIWDTTSRRILYKL 314 (347)
Q Consensus 253 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~-~l~sgs-~dg~i~vwd~~~~~~~~~~ 314 (347)
+|.... +.+..+.. ......++|+|||+ +++++. .++.|.+||..+++.+.++
T Consensus 303 ID~~t~----~vv~~i~~-----g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~i 357 (373)
T 2mad_H 303 VTGLVG----QTSSQISL-----GHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQST 357 (373)
T ss_pred EECCCC----EEEEEEEC-----CCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEeee
Confidence 998743 33444432 12467889999999 777776 5899999999999988774
No 204
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.57 E-value=6.7e-14 Score=122.45 Aligned_cols=172 Identities=10% Similarity=0.132 Sum_probs=132.2
Q ss_pred cEEEEEECCCCCeEEEeeCCCcEEEEeccCC----------CeeeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEE
Q 019006 59 AVYTMKFNPAGTVIASGSHDRDIFLWHVHGD----------CKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWD 128 (347)
Q Consensus 59 ~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~----------~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd 128 (347)
.++.+++++...++++|+.++. ++|++..- ..... ...+.. |+.++| ++..|+++ .++.|++||
T Consensus 39 ~~nlLais~~~gll~a~~~~~l-~v~~~~~l~~~~~~~~~~~~~~~-~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~d 112 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSKA-VVGELQLLRDHITSDSTPLTFKW-EKEIPD-VIFVCF--HGDQVLVS-TRNALYSLD 112 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTEE-EEEEHHHHHHHHHSSSCCCCCSE-EEECTT-EEEEEE--ETTEEEEE-ESSEEEEEE
T ss_pred cccEEEEcCCCCEEEEeCCCEE-EEEEhhHhhhhhccccccccceE-EeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEE
Confidence 5888999999999999999854 45986421 11112 223556 999999 88999988 889999999
Q ss_pred CCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeecCCCCceEEEEEcCCCCeEEEEecCCcE
Q 019006 129 VETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDV 208 (347)
Q Consensus 129 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i 208 (347)
+.+.........+...+..+.+.+. .+++++.||.+.+||++.+.... ....|++++|+|.| ++.|..||++
T Consensus 113 v~sl~~~~~~~~~~~~v~~i~~~~p---~~av~~~dG~L~v~dl~~~~~~~---~~~~Vs~v~WSpkG--~~vg~~dg~i 184 (388)
T 1xip_A 113 LEELSEFRTVTSFEKPVFQLKNVNN---TLVILNSVNDLSALDLRTKSTKQ---LAQNVTSFDVTNSQ--LAVLLKDRSF 184 (388)
T ss_dssp SSSTTCEEEEEECSSCEEEEEECSS---EEEEEETTSEEEEEETTTCCEEE---EEESEEEEEECSSE--EEEEETTSCE
T ss_pred chhhhccCccceeecceeeEEecCC---CEEEEECCCCEEEEEccCCcccc---ccCCceEEEEcCCc--eEEEEcCCcE
Confidence 9876655555556666666665543 27788999999999999776543 23479999999998 7889999999
Q ss_pred EEEeCCCCce--EEEe------c---CCCCceeEEEECCCCCEEEEE
Q 019006 209 KVWDLRKGEV--SMTL------Q---GHQDMITGMSLSPDGSYLLTN 244 (347)
Q Consensus 209 ~iwd~~~~~~--~~~~------~---~~~~~i~~v~~~~~~~~l~t~ 244 (347)
++|+...++. ..++ . +|...|.+|.|.+++.++++-
T Consensus 185 ~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y 231 (388)
T 1xip_A 185 QSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVF 231 (388)
T ss_dssp EEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEE
T ss_pred EEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEE
Confidence 9999887765 5555 2 367789999999999988874
No 205
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.55 E-value=3.6e-12 Score=111.15 Aligned_cols=252 Identities=13% Similarity=0.070 Sum_probs=162.7
Q ss_pred EEEECCCCCeEEEee----------CCCcEEEEeccCCCeeeEEEe-Cc------ccceeEEEEcCCCCEEEEecC--CC
Q 019006 62 TMKFNPAGTVIASGS----------HDRDIFLWHVHGDCKNFMVLK-GH------KNAILDLHWTTDGSQIISASP--DK 122 (347)
Q Consensus 62 ~v~~~~~~~~l~s~~----------~d~~v~~w~~~~~~~~~~~~~-~h------~~~v~~~~~~~~~~~l~s~~~--dg 122 (347)
.++++|+|+.|+++. .++.|.+||.... +....+. +. ...-..++++|||++++.+.. ++
T Consensus 82 ~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~-~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~ 160 (386)
T 3sjl_D 82 NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTL-LPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAP 160 (386)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC-CEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSC
T ss_pred cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCC-eEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCC
Confidence 399999999887765 3678999998643 3333332 11 123456899999999888764 68
Q ss_pred eEEEEECCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCC-CCceeecCC-----CCce-EEEEEc-C
Q 019006 123 TLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQ-RGAIQTFPD-----KYQI-TAVSFS-D 194 (347)
Q Consensus 123 ~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~-~~~~~~~~~-----~~~v-~~~~~~-~ 194 (347)
.|.++|+.+++.+.++..... . ...+.+...+++.+.||++.+.++.. ++....... ...+ ....|. +
T Consensus 161 ~VsVID~~t~~vv~tI~v~g~--~--~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~ 236 (386)
T 3sjl_D 161 AVGVVDLEGKAFKRMLDVPDC--Y--HIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQK 236 (386)
T ss_dssp EEEEEETTTTEEEEEEECCSE--E--EEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETT
T ss_pred eEEEEECCCCcEEEEEECCCc--c--eeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcC
Confidence 999999999998887754321 1 11233445667788899999999875 443221111 1111 123554 5
Q ss_pred CCCeEEEEecCCcEEEEeCCCCce--EEEec---------C-CCCceeEEEECCCCCEEEEEcC----------CCcEEE
Q 019006 195 ASDKIYTGGIDNDVKVWDLRKGEV--SMTLQ---------G-HQDMITGMSLSPDGSYLLTNGM----------DCKLCI 252 (347)
Q Consensus 195 ~~~~l~~~~~dg~i~iwd~~~~~~--~~~~~---------~-~~~~i~~v~~~~~~~~l~t~~~----------d~~i~~ 252 (347)
++..++ .+.+|.|++.|+..... ...+. + .......++++++++.++.... .++|.+
T Consensus 237 dG~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~v 315 (386)
T 3sjl_D 237 AGRLVW-PTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVV 315 (386)
T ss_dssp TTEEEE-EBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEE
T ss_pred CCcEEE-EeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEE
Confidence 554444 66689999999976542 22221 0 1123345788999888877642 257899
Q ss_pred EeCCCCCCcCceeEEEeccccccccceEEEEECCCCC-EEEEe-eCCCeEEEEeCCCceeeEEecCCccCeeeEEEcCC
Q 019006 253 WDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGS-KVTAG-SSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHAT 329 (347)
Q Consensus 253 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~-~l~sg-s~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~ 329 (347)
.|+... +.++.+.. ...+..+++++|++ +|++. ..++.|.++|..+++.+.+++.- +.-+.+.+++|
T Consensus 316 iD~~t~----kv~~~i~v-----g~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~-~~p~~l~~s~d 384 (386)
T 3sjl_D 316 LDAKTG----ERLAKFEM-----GHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQL-GHGPQVITTAD 384 (386)
T ss_dssp EETTTC----CEEEEEEE-----EEEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECCC-CSSCCEEEECC
T ss_pred EECCCC----eEEEEEEC-----CCCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecCC-CCCceeEECCc
Confidence 998753 33343322 23577899999997 66664 55899999999999999887532 33455666665
No 206
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.55 E-value=7.7e-12 Score=109.05 Aligned_cols=275 Identities=12% Similarity=0.103 Sum_probs=177.0
Q ss_pred EECCCCCeEEEeeC-----CCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEec----------CCCeEEEEE
Q 019006 64 KFNPAGTVIASGSH-----DRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISAS----------PDKTLRAWD 128 (347)
Q Consensus 64 ~~~~~~~~l~s~~~-----d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~----------~dg~i~iwd 128 (347)
...|+++.+.+... ++.|.+.|... .+....+..-..+ .++++|||++++.+. .++.|.+||
T Consensus 39 ~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t-~~v~~~I~vG~~P--~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD 115 (386)
T 3sjl_D 39 APAPDARRVYVNDPAHFAAVTQQFVIDGEA-GRVIGMIDGGFLP--NPVVADDGSFIAHASTVFSRIARGERTDYVEVFD 115 (386)
T ss_dssp CCCCCTTEEEEEECGGGCSSEEEEEEETTT-TEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEEC
T ss_pred ccCCCCCEEEEEcCcccCCCCEEEEEECCC-CeEEEEEECCCCC--cEEECCCCCEEEEEcccccccccCCCCCEEEEEE
Confidence 34688887777765 67899999854 3444444433333 499999999988775 367899999
Q ss_pred CCCCceeeeeeccC-------cceeEeecCCCCCCEEEEEc-CCCceEEEeCCCCCceeecCCCCceEEEEEcCCCCeEE
Q 019006 129 VETGKQIKKMAEHN-------SFVNSCCPSRRGPPLVVSGS-DDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIY 200 (347)
Q Consensus 129 ~~~~~~~~~~~~~~-------~~v~~~~~~~~~~~~~~s~~-~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 200 (347)
..+.+.+..+.... .....+.+++++..++++.. .++.|.++|+.+++.+..++.... ...+......++
T Consensus 116 ~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~--~~~~P~g~~~~~ 193 (386)
T 3sjl_D 116 PVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDC--YHIFPTAPDTFF 193 (386)
T ss_dssp TTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE--EEEEEEETTEEE
T ss_pred CCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCc--ceeecCCCceeE
Confidence 99998887775321 12334667777765555543 378999999999998887754332 122322345677
Q ss_pred EEecCCcEEEEeCCC-CceEEEecCCC----Ccee-EEEE-CCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEeccc-
Q 019006 201 TGGIDNDVKVWDLRK-GEVSMTLQGHQ----DMIT-GMSL-SPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQ- 272 (347)
Q Consensus 201 ~~~~dg~i~iwd~~~-~~~~~~~~~~~----~~i~-~v~~-~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~- 272 (347)
+.+.||++.+.++.. ++.......+. ..+. ...| .++|++++ .+.+|.+.+.|+..... .....+.-..
T Consensus 194 ~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~--~v~~~~~~~~~ 270 (386)
T 3sjl_D 194 MHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDA--KFLPAVEALTE 270 (386)
T ss_dssp EEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSC--EECCCEESSCH
T ss_pred EECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCcc--eeecceecccc
Confidence 888899999999876 55432221111 1221 2355 36776555 45578999999864221 1111111000
Q ss_pred ----cc-cccceEEEEECCCCCEEEEeeC----------CCeEEEEeCCCceeeEEecCCccCeeeEEEcCCCC-EEE-E
Q 019006 273 ----HN-FEKNLLKCGWSPDGSKVTAGSS----------DRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEP-VIG-S 335 (347)
Q Consensus 273 ----~~-~~~~~~~~~~s~~g~~l~sgs~----------dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~-s 335 (347)
.. .......++++|+++.|+.... .+.|.++|+.+++.+.+++- ...++.++|+++++ +|. +
T Consensus 271 ~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~v-g~~~~~lavs~D~~~~ly~t 349 (386)
T 3sjl_D 271 AERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEM-GHEIDSINVSQDEKPLLYAL 349 (386)
T ss_dssp HHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEE-EEEECEEEECSSSSCEEEEE
T ss_pred ccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEEC-CCCcceEEECCCCCeEEEEE
Confidence 00 0112223567899998887642 25799999999999988763 23688999999986 444 4
Q ss_pred ecCCCcEEeecC
Q 019006 336 CSSDKQIYLGEI 347 (347)
Q Consensus 336 ~s~D~~i~i~~~ 347 (347)
...++.|.+.|.
T Consensus 350 n~~~~~VsViD~ 361 (386)
T 3sjl_D 350 STGDKTLYIHDA 361 (386)
T ss_dssp ETTTTEEEEEET
T ss_pred cCCCCeEEEEEC
Confidence 566899998873
No 207
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.54 E-value=1.7e-11 Score=109.26 Aligned_cols=235 Identities=10% Similarity=0.026 Sum_probs=159.8
Q ss_pred ceeEEEEcCCCCEEEEecCCCeEEEEECCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCC--ceEEEeCCCCCcee
Q 019006 102 AILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDG--TAKLWDMRQRGAIQ 179 (347)
Q Consensus 102 ~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~--~i~iwd~~~~~~~~ 179 (347)
....|+|+++++++++...++.|++||..++........ ..... +++.+.+. .++.+..++ .|.+++...+....
T Consensus 132 ~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~-~~~~~-ia~~~~g~-~l~~~d~~~~~~I~~~d~~~~~~~~ 208 (409)
T 3hrp_A 132 YMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPG-FKGGK-PAVTKDKQ-RVYSIGWEGTHTVYVYMKASGWAPT 208 (409)
T ss_dssp CEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEET-CCBCB-CEECTTSS-EEEEEBSSTTCEEEEEEGGGTTCEE
T ss_pred CceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeecc-CCCCc-eeEecCCC-cEEEEecCCCceEEEEEcCCCceeE
Confidence 567899999998778877889999999987765433332 22223 56666654 555666555 78888876554433
Q ss_pred ec----C-CCCceEEEEEcCCCCeEEEEecCCcEEEEeCCCCceEEE----ecCCCCce-e-EEEECCC-CCEEEEEcCC
Q 019006 180 TF----P-DKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMT----LQGHQDMI-T-GMSLSPD-GSYLLTNGMD 247 (347)
Q Consensus 180 ~~----~-~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~----~~~~~~~i-~-~v~~~~~-~~~l~t~~~d 247 (347)
.+ . ....+..++++|+...|+.+..++.|+.||..++..... ..++...- . .++|+|+ +..+++...+
T Consensus 209 ~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~ 288 (409)
T 3hrp_A 209 RIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNL 288 (409)
T ss_dssp EEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTT
T ss_pred EeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCC
Confidence 33 2 335678899999767777777788999999987654332 22222222 2 8999995 5566666677
Q ss_pred CcEEEEeCCCCCCcCceeEEEeccc--cc---------cccceEEEEECCCCCEEEEee-CCCeEEEEeCCCceeeEEec
Q 019006 248 CKLCIWDMRPYAPQNRCVKILEGHQ--HN---------FEKNLLKCGWSPDGSKVTAGS-SDRMVYIWDTTSRRILYKLP 315 (347)
Q Consensus 248 ~~i~~wd~~~~~~~~~~~~~~~~~~--~~---------~~~~~~~~~~s~~g~~l~sgs-~dg~i~vwd~~~~~~~~~~~ 315 (347)
+.|+.||... . ...+.++. .. .-.....++++|+|.++++-+ .++.|+.|++.++.+. .+.
T Consensus 289 ~~I~~~~~~g-----~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~-~~~ 361 (409)
T 3hrp_A 289 SSVYKITPDG-----E-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVS-TVA 361 (409)
T ss_dssp TEEEEECTTC-----C-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEE-EEE
T ss_pred CEEEEEecCC-----C-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEE-EEe
Confidence 8999998652 1 22222211 00 012467899999999888888 8999999998777643 443
Q ss_pred CC---------------ccCeeeEEEcCCCCEEEEecCCCcEEeec
Q 019006 316 GH---------------TGSVNESVFHATEPVIGSCSSDKQIYLGE 346 (347)
Q Consensus 316 ~h---------------~~~v~~~~~~~~~~~l~s~s~D~~i~i~~ 346 (347)
++ -.....+++++++.++++-..++.|+..+
T Consensus 362 g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~ 407 (409)
T 3hrp_A 362 GQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYA 407 (409)
T ss_dssp ECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEE
T ss_pred CCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEE
Confidence 43 24578999999998888888888887654
No 208
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.52 E-value=3.3e-11 Score=107.40 Aligned_cols=237 Identities=12% Similarity=0.087 Sum_probs=156.7
Q ss_pred ccEEEEEECCCCCeEEEeeCCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEecCCC--eEEEEECCCCcee
Q 019006 58 SAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDK--TLRAWDVETGKQI 135 (347)
Q Consensus 58 ~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg--~i~iwd~~~~~~~ 135 (347)
.....|+|+++++++++...++.|++|+..+.. ....... ..... ++|+++++.|+.+..++ .|.+++...+...
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~-~~~~~~~-~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~ 207 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNK-VTTVHPG-FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAP 207 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTE-EEEEEET-CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCE
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCE-EEEeecc-CCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCcee
Confidence 468899999999988888888999999986432 2222222 22334 89999999999888766 7888887765443
Q ss_pred eee----eccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceee----cCCCCce--E-EEEEcCCCCeEE-EEe
Q 019006 136 KKM----AEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQT----FPDKYQI--T-AVSFSDASDKIY-TGG 203 (347)
Q Consensus 136 ~~~----~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~----~~~~~~v--~-~~~~~~~~~~l~-~~~ 203 (347)
..+ .........+++.+.+..+++ +..++.|..||...+..... ....... . .++|+|++..|+ +-.
T Consensus 208 ~~~g~~~~~~~~~p~~iav~p~~g~lyv-~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~ 286 (409)
T 3hrp_A 208 TRIGQLGSTFSGKIGAVALDETEEWLYF-VDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQ 286 (409)
T ss_dssp EEEEECCTTSCSCCCBCEECTTSSEEEE-ECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEET
T ss_pred EEeeeccchhcCCcEEEEEeCCCCeEEE-EECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeC
Confidence 333 113344555666665555555 66788999999876653222 1111111 2 899999655554 555
Q ss_pred cCCcEEEEeCCCCceEEEecCC---------------CCceeEEEECCCCCEEEEEc-CCCcEEEEeCCCCCCcCceeEE
Q 019006 204 IDNDVKVWDLRKGEVSMTLQGH---------------QDMITGMSLSPDGSYLLTNG-MDCKLCIWDMRPYAPQNRCVKI 267 (347)
Q Consensus 204 ~dg~i~iwd~~~~~~~~~~~~~---------------~~~i~~v~~~~~~~~l~t~~-~d~~i~~wd~~~~~~~~~~~~~ 267 (347)
.++.|+.|+.... ...+.++ -.....++++++|+.+++-. .++.|+.||+... . +..
T Consensus 287 ~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G----~-v~~ 359 (409)
T 3hrp_A 287 NLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDG----Y-VST 359 (409)
T ss_dssp TTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTT----E-EEE
T ss_pred CCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCC----E-EEE
Confidence 6788999987643 2222222 13468899999999888877 8899999996432 2 223
Q ss_pred Eeccc--cc---------cccceEEEEECCCCCEEEEeeCCCeEEEEeC
Q 019006 268 LEGHQ--HN---------FEKNLLKCGWSPDGSKVTAGSSDRMVYIWDT 305 (347)
Q Consensus 268 ~~~~~--~~---------~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~ 305 (347)
+.++. .. .-.....++++++|.++++-..++.|+.+++
T Consensus 360 ~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 360 VAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp EEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred EeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 32220 00 0135778899999888888888888888765
No 209
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.51 E-value=9.8e-11 Score=99.76 Aligned_cols=229 Identities=12% Similarity=0.080 Sum_probs=147.2
Q ss_pred ceeEEEEcCCCC-EEEEecCCCeEEEEECCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceee
Q 019006 102 AILDLHWTTDGS-QIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQT 180 (347)
Q Consensus 102 ~v~~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~ 180 (347)
-..+..|++++. .+++...++.|..||..+++. ..+ .....+..+++.+++. ++++ . +..|.+||..++.....
T Consensus 14 ~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~-~~~~~~~~i~~~~dG~-l~v~-~-~~~l~~~d~~~g~~~~~ 88 (297)
T 3g4e_A 14 CGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-QRV-TMDAPVSSVALRQSGG-YVAT-I-GTKFCALNWKEQSAVVL 88 (297)
T ss_dssp BEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-EEE-ECSSCEEEEEEBTTSS-EEEE-E-TTEEEEEETTTTEEEEE
T ss_pred cccCCeEECCCCEEEEEECCCCEEEEEECCCCcE-EEE-eCCCceEEEEECCCCC-EEEE-E-CCeEEEEECCCCcEEEE
Confidence 345778998554 556666789999999987654 222 2345566777777665 5544 3 56799999876654322
Q ss_pred c--C---CCCceEEEEEcCCCCeEEEEec-----------CCcEEEEeCCCCceEEEecCCCCceeEEEECCCCCEEE-E
Q 019006 181 F--P---DKYQITAVSFSDASDKIYTGGI-----------DNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLL-T 243 (347)
Q Consensus 181 ~--~---~~~~v~~~~~~~~~~~l~~~~~-----------dg~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~-t 243 (347)
. . ....++.+.++++++..++... .+.|+.+|.. ++... +..+....+.++|+|+++.|+ +
T Consensus 89 ~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~~~~-~~~~~~~pngi~~spdg~~lyv~ 166 (297)
T 3g4e_A 89 ATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD-HHVKK-YFDQVDISNGLDWSLDHKIFYYI 166 (297)
T ss_dssp EECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT-SCEEE-EEEEESBEEEEEECTTSCEEEEE
T ss_pred EecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC-CCEEE-EeeccccccceEEcCCCCEEEEe
Confidence 1 1 1235788999999986554422 1234444443 33222 222334568899999998765 5
Q ss_pred EcCCCcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCCceeeEEecCCccCeee
Q 019006 244 NGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNE 323 (347)
Q Consensus 244 ~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~v~~ 323 (347)
.+.++.|.+||+..........+.+.... ........++++++|.+.++...++.|.+||..+++++..+..+...+.+
T Consensus 167 ~~~~~~i~~~~~d~~~G~~~~~~~~~~~~-~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~t~ 245 (297)
T 3g4e_A 167 DSLSYSVDAFDYDLQTGQISNRRSVYKLE-KEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTTS 245 (297)
T ss_dssp EGGGTEEEEEEECTTTCCEEEEEEEEECC-GGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSSSBEEE
T ss_pred cCCCCcEEEEeccCCCCcccCcEEEEECC-CCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCCceE
Confidence 55678999998742111100011111110 11234667889999998888888889999999999999888887778999
Q ss_pred EEEc-CCCCEE-EEecC
Q 019006 324 SVFH-ATEPVI-GSCSS 338 (347)
Q Consensus 324 ~~~~-~~~~~l-~s~s~ 338 (347)
++|. |+++.| +|...
T Consensus 246 ~~f~g~d~~~L~vt~~~ 262 (297)
T 3g4e_A 246 CCFGGKNYSEMYVTCAR 262 (297)
T ss_dssp EEEESGGGCEEEEEEBC
T ss_pred EEEeCCCCCEEEEEcCC
Confidence 9998 776644 44443
No 210
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.51 E-value=1.4e-12 Score=113.67 Aligned_cols=264 Identities=11% Similarity=0.072 Sum_probs=165.7
Q ss_pred ccEEEEEECCCCCeEEEee--CCCcEEEEeccCCCeeeEEE-------eCcccceeEEEEcCCCCEEEEecC-----CCe
Q 019006 58 SAVYTMKFNPAGTVIASGS--HDRDIFLWHVHGDCKNFMVL-------KGHKNAILDLHWTTDGSQIISASP-----DKT 123 (347)
Q Consensus 58 ~~V~~v~~~~~~~~l~s~~--~d~~v~~w~~~~~~~~~~~~-------~~h~~~v~~~~~~~~~~~l~s~~~-----dg~ 123 (347)
..+..|+++|+|+++++.. .++.+.||.+. +.. +..+ .+|-..+..++++++++++++-.. ++.
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~-~g~-~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~ 94 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELT-QDG-LIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPK 94 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEE-TTE-EEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEEC-CCC-eecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCe
Confidence 6899999999999998853 23435666654 222 2211 134467899999999876665433 578
Q ss_pred EEEEECCCCceeeeeecc------CcceeEeecCCCCCCEEEEEc---CCCceEEEeCCCCCceeecCCCCc--eEEEEE
Q 019006 124 LRAWDVETGKQIKKMAEH------NSFVNSCCPSRRGPPLVVSGS---DDGTAKLWDMRQRGAIQTFPDKYQ--ITAVSF 192 (347)
Q Consensus 124 i~iwd~~~~~~~~~~~~~------~~~v~~~~~~~~~~~~~~s~~---~d~~i~iwd~~~~~~~~~~~~~~~--v~~~~~ 192 (347)
|.+||+.+++.+..+... ......+++.+.+..++++-. .++.|.+||+.+++....+..+.. .....+
T Consensus 95 i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~ 174 (343)
T 2qe8_A 95 LVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDL 174 (343)
T ss_dssp EEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCC
T ss_pred EEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccce
Confidence 999999988866655432 123456666655445556655 678999999987766554432100 000223
Q ss_pred cCCCCeEEEEecCCcEEEEeCCCCceEEEecCCCCceeEEEECCCCCEEEEEcCCC-cEEEEeCCCC---CCc-Cce---
Q 019006 193 SDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDC-KLCIWDMRPY---APQ-NRC--- 264 (347)
Q Consensus 193 ~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~~d~-~i~~wd~~~~---~~~-~~~--- 264 (347)
.+++..+.+.+.++.++.|. ..+..|+|+|+++.|+.+..++ .+..++.... ... ...
T Consensus 175 ~~~g~~~~~~~~~g~~~~~~--------------~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 240 (343)
T 2qe8_A 175 VIDGVPVQIGQPDGTVIRPH--------------LGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSK 240 (343)
T ss_dssp EETTEECBEECTTSCEECCC--------------CCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTT
T ss_pred eECCEEEEeccCCCceecee--------------cccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcc
Confidence 33555566666777665542 1367899999999888877665 4444443210 000 000
Q ss_pred eEEEeccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCCceeeEEecC-CccCeeeEEEcCCCCEEEEecCCCcE
Q 019006 265 VKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPG-HTGSVNESVFHATEPVIGSCSSDKQI 342 (347)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s~s~D~~i 342 (347)
+... ++ ......++++++|.++++...++.|.+||..+++....... +-..+..++|.+++.++++.+..+.+
T Consensus 241 ~~~~-g~----~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~~~~~~ 314 (343)
T 2qe8_A 241 IERY-SE----KPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCNQLHHS 314 (343)
T ss_dssp CEEE-EE----CCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSCEEEEECCGGGS
T ss_pred eEec-cc----CCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCCCcEEEEeCccccc
Confidence 0111 11 11234577899999999999999999999855654332222 24568899999999988887755443
No 211
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.50 E-value=4.3e-10 Score=95.40 Aligned_cols=235 Identities=10% Similarity=0.041 Sum_probs=163.1
Q ss_pred cccceeEEEEcCCCCEEEEecCCCeEEEEECCCCceee-eeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCc
Q 019006 99 HKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIK-KMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGA 177 (347)
Q Consensus 99 h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~ 177 (347)
....+.++++.++|+..++...++.|.+||.. ++... .+......+..++..+.+ .+.++...++.|..+|.. +..
T Consensus 18 ~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~v~~~d~~-g~~ 94 (300)
T 2qc5_A 18 PDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLG-DIWFTENGANKIGKLSKK-GGF 94 (300)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTS-CEEEEETTTTEEEEECTT-SCE
T ss_pred CCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCC-CEEEEecCCCeEEEECCC-CCe
Confidence 34577899999999988887788999999987 54332 111222445566665544 566766667889999987 443
Q ss_pred ee-ecC-CCCceEEEEEcCCCCeEEEEecCCcEEEEeCCCCceE-EEecCCCCceeEEEECCCCCEEEEEcCCCcEEEEe
Q 019006 178 IQ-TFP-DKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVS-MTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWD 254 (347)
Q Consensus 178 ~~-~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~-~~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd 254 (347)
.. ..+ ....+..+++++++...++...++.|..||.. ++.. ..+......+.++++.++++..++...++.|..+|
T Consensus 95 ~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~ 173 (300)
T 2qc5_A 95 TEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRIT 173 (300)
T ss_dssp EEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEEC
T ss_pred EEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEEC
Confidence 21 222 23568899999988877776668899999987 5543 22333345688999999999777777678899998
Q ss_pred CCCCCCcCceeEEEeccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCCceee-EEecCCccCeeeEEEcCCCCEE
Q 019006 255 MRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRIL-YKLPGHTGSVNESVFHATEPVI 333 (347)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~-~~~~~h~~~v~~~~~~~~~~~l 333 (347)
.. . .... +.... ....+..++++++|.+.++....+.|.+||. +++.. ..++.+...+..+++.+++.+.
T Consensus 174 ~~-g----~~~~-~~~~~--~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~ 244 (300)
T 2qc5_A 174 NT-G----KLEE-YPLPT--NAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSEIW 244 (300)
T ss_dssp TT-C----CEEE-EECSS--TTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEE
T ss_pred CC-C----cEEE-eeCCC--CCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCCEE
Confidence 63 1 1111 21111 1235678889999988887777889999998 44433 3345556678999999999988
Q ss_pred EEecCCCcEEeec
Q 019006 334 GSCSSDKQIYLGE 346 (347)
Q Consensus 334 ~s~s~D~~i~i~~ 346 (347)
++...++.|..++
T Consensus 245 v~~~~~~~i~~~~ 257 (300)
T 2qc5_A 245 FTEWGANQIGRIT 257 (300)
T ss_dssp EEETTTTEEEEEC
T ss_pred EeccCCCeEEEEC
Confidence 8877778887765
No 212
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.49 E-value=2.2e-11 Score=107.97 Aligned_cols=272 Identities=11% Similarity=0.081 Sum_probs=174.9
Q ss_pred CCCCeEEEeeC-C----CcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEec----------CCCeEEEEECCC
Q 019006 67 PAGTVIASGSH-D----RDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISAS----------PDKTLRAWDVET 131 (347)
Q Consensus 67 ~~~~~l~s~~~-d----~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~----------~dg~i~iwd~~~ 131 (347)
|++..+.+... + +.|.++|.... +....+..-..+ .++++||+++++.+. .++.|.++|..+
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~-~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t 158 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTG-RILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVT 158 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTT-EEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTT
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCC-EEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCC
Confidence 46665555544 2 68999998643 444444433334 899999999888776 367899999999
Q ss_pred Cceeeeeecc-------CcceeEeecCCCCCCEEEEEcC-CCceEEEeCCCCCceeecCCCCceEEEEEcCCC-CeEEEE
Q 019006 132 GKQIKKMAEH-------NSFVNSCCPSRRGPPLVVSGSD-DGTAKLWDMRQRGAIQTFPDKYQITAVSFSDAS-DKIYTG 202 (347)
Q Consensus 132 ~~~~~~~~~~-------~~~v~~~~~~~~~~~~~~s~~~-d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~ 202 (347)
.+.+..+... ......+.+++++..++++... ++.|.+.|+.+++.+..++-... ....|++ ..+++.
T Consensus 159 ~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~---~~~~p~g~~~~v~~ 235 (426)
T 3c75_H 159 FLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDC---YHIFPASPTVFYMN 235 (426)
T ss_dssp CCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE---EEEEEEETTEEEEE
T ss_pred CcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCc---eeeccCCCcEEEEE
Confidence 9888776532 1223345667776655554433 68899999999988877764332 2233333 455667
Q ss_pred ecCCcEEEEeCCCCceEEE----ecCCCCc-eeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEec---cccc
Q 019006 203 GIDNDVKVWDLRKGEVSMT----LQGHQDM-ITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEG---HQHN 274 (347)
Q Consensus 203 ~~dg~i~iwd~~~~~~~~~----~~~~~~~-i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~---~~~~ 274 (347)
+.||++.+.++.+++.... +.....+ ...+.+.+++..++.....+.+.+.|+..... .....+.. ....
T Consensus 236 ~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~--~v~~~~~~~~~~~i~ 313 (426)
T 3c75_H 236 CRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGA--TFRAPIEALTEAERA 313 (426)
T ss_dssp ETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCE--EECCCEESSCTTTGG
T ss_pred cCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCce--EEeeeeeeccccccc
Confidence 7788888888865554422 1111111 12356788888877777888999999853210 01111110 0000
Q ss_pred ---cccceEEEEECCCCCEEEEeeC----------CCeEEEEeCCCceeeEEecCCccCeeeEEEcCCCC-EEEEec-CC
Q 019006 275 ---FEKNLLKCGWSPDGSKVTAGSS----------DRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEP-VIGSCS-SD 339 (347)
Q Consensus 275 ---~~~~~~~~~~s~~g~~l~sgs~----------dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~s-~D 339 (347)
.......++++|++++|++... ++.|.++|..+.+.+.+++.. ...+.++|+|+++ ++.++. .+
T Consensus 314 ~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg-~~P~gia~spDg~~~lyv~n~~s 392 (426)
T 3c75_H 314 DDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELG-HEIDSINVSQDAEPLLYALSAGT 392 (426)
T ss_dssp GTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE-EEECEEEECCSSSCEEEEEETTT
T ss_pred cccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECC-CCcCeEEEccCCCEEEEEEcCCC
Confidence 0011112578999998777542 357999999999999888642 3589999999998 777776 58
Q ss_pred CcEEeecC
Q 019006 340 KQIYLGEI 347 (347)
Q Consensus 340 ~~i~i~~~ 347 (347)
+.|.+.|.
T Consensus 393 ~~VsVID~ 400 (426)
T 3c75_H 393 QTLHIYDA 400 (426)
T ss_dssp TEEEEEET
T ss_pred CeEEEEEC
Confidence 99998874
No 213
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.47 E-value=2.7e-11 Score=107.47 Aligned_cols=239 Identities=11% Similarity=0.029 Sum_probs=160.0
Q ss_pred EEEECCCCCeEEEee----------CCCcEEEEeccCCCeeeEEEe-C-c-----ccceeEEEEcCCCCEEEEecC--CC
Q 019006 62 TMKFNPAGTVIASGS----------HDRDIFLWHVHGDCKNFMVLK-G-H-----KNAILDLHWTTDGSQIISASP--DK 122 (347)
Q Consensus 62 ~v~~~~~~~~l~s~~----------~d~~v~~w~~~~~~~~~~~~~-~-h-----~~~v~~~~~~~~~~~l~s~~~--dg 122 (347)
.+.++|+|+.|+++. .++.|.++|.... +....+. + . ......+.++|||++++.+.. ++
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~-~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~ 200 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF-LPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAP 200 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC-CEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSC
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC-cEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCC
Confidence 789999999888776 4678999998643 3332222 1 0 123457889999999998864 57
Q ss_pred eEEEEECCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceee----cCCC--CceEEEEEcCCC
Q 019006 123 TLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQT----FPDK--YQITAVSFSDAS 196 (347)
Q Consensus 123 ~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~----~~~~--~~v~~~~~~~~~ 196 (347)
.|.+.|+.+.+.+..+..... ....+.+...+++.+.||++.+.+...++.... +... .....+.+.+++
T Consensus 201 ~VsVID~~t~kvv~~I~v~g~----~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg 276 (426)
T 3c75_H 201 AVGVVDLEGKTFDRMLDVPDC----YHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRS 276 (426)
T ss_dssp EEEEEETTTTEEEEEEECCSE----EEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTT
T ss_pred eEEEEECCCCeEEEEEEcCCc----eeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCC
Confidence 899999999988877754322 111223335667777889988888855444321 1111 111235678888
Q ss_pred CeEEEEecCCcEEEEeCCCCceEE----EecC--------CCCceeEEEECCCCCEEEEEcC----------CCcEEEEe
Q 019006 197 DKIYTGGIDNDVKVWDLRKGEVSM----TLQG--------HQDMITGMSLSPDGSYLLTNGM----------DCKLCIWD 254 (347)
Q Consensus 197 ~~l~~~~~dg~i~iwd~~~~~~~~----~~~~--------~~~~i~~v~~~~~~~~l~t~~~----------d~~i~~wd 254 (347)
..++..+..+.+.+.|........ .+.. .......++++|+++++++... ++.|.+.|
T Consensus 277 ~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID 356 (426)
T 3c75_H 277 GRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLN 356 (426)
T ss_dssp CEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEE
T ss_pred CEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEE
Confidence 888777788999999986554221 1100 0111223789999887776532 35799999
Q ss_pred CCCCCCcCceeEEEeccccccccceEEEEECCCCC-EEEEee-CCCeEEEEeCCCceeeEEe
Q 019006 255 MRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGS-KVTAGS-SDRMVYIWDTTSRRILYKL 314 (347)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~-~l~sgs-~dg~i~vwd~~~~~~~~~~ 314 (347)
.... +.+..+.. ......++|+|||+ +|++.. .++.|.++|+.+++.+.++
T Consensus 357 ~~T~----kvv~~I~v-----g~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 357 AETG----ERINKIEL-----GHEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp TTTC----CEEEEEEE-----EEEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred CCCC----eEEEEEEC-----CCCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEe
Confidence 8753 33444432 12467889999999 888877 5899999999999999887
No 214
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.47 E-value=6e-11 Score=101.49 Aligned_cols=229 Identities=12% Similarity=0.095 Sum_probs=148.2
Q ss_pred cceeEEEEcCCCC-EEEEecCCCeEEEEECCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCcee
Q 019006 101 NAILDLHWTTDGS-QIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQ 179 (347)
Q Consensus 101 ~~v~~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~ 179 (347)
.......|+++++ .+++...++.|..|+. +++ ...+......+..+.+.+++ .++++...++.|..||.. +....
T Consensus 45 ~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG-~l~v~~~~~~~v~~~~~~-g~~~~ 120 (305)
T 3dr2_A 45 TWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQ-RLVHCEHGRRAITRSDAD-GQAHL 120 (305)
T ss_dssp SSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECTTS-CEEEEETTTTEEEEECTT-SCEEE
T ss_pred cCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECCCC-CEEEEECCCCEEEEECCC-CCEEE
Confidence 3456788999998 5667778899999997 444 34444455566677777665 466665566789999875 33221
Q ss_pred ecC---C--CCceEEEEEcCCCCeEEE----Eec-------------CCcEEEEeCCCCceEEEecCCCCceeEEEECCC
Q 019006 180 TFP---D--KYQITAVSFSDASDKIYT----GGI-------------DNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPD 237 (347)
Q Consensus 180 ~~~---~--~~~v~~~~~~~~~~~l~~----~~~-------------dg~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~ 237 (347)
... . ...+..+.+++++...++ |.. .+.|+.||..+++..... .....+.++|+|+
T Consensus 121 ~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p~gl~~spd 198 (305)
T 3dr2_A 121 LVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDHPNGLAFSPD 198 (305)
T ss_dssp EECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESSEEEEEECTT
T ss_pred EEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCCCcceEEcCC
Confidence 111 1 124667999999987776 432 256888887666544332 3345688999999
Q ss_pred CCEEEEEcCC------CcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCCceee
Q 019006 238 GSYLLTNGMD------CKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRIL 311 (347)
Q Consensus 238 ~~~l~t~~~d------~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~ 311 (347)
++.|+.+... +.|.+||+.... ......+.... ......++++++|++.++. .+ .|++|+. .++.+
T Consensus 199 g~~lyv~~~~~~~~~~~~i~~~~~~~~~--l~~~~~~~~~~---~~~pdgi~~d~~G~lwv~~-~~-gv~~~~~-~g~~~ 270 (305)
T 3dr2_A 199 EQTLYVSQTPEQGHGSVEITAFAWRDGA--LHDRRHFASVP---DGLPDGFCVDRGGWLWSSS-GT-GVCVFDS-DGQLL 270 (305)
T ss_dssp SSEEEEEECCC---CCCEEEEEEEETTE--EEEEEEEECCS---SSCCCSEEECTTSCEEECC-SS-EEEEECT-TSCEE
T ss_pred CCEEEEEecCCcCCCCCEEEEEEecCCC--ccCCeEEEECC---CCCCCeEEECCCCCEEEec-CC-cEEEECC-CCCEE
Confidence 9988777654 689999976321 00011111110 1223456789999955544 44 4999998 46666
Q ss_pred EEecCCccCeeeEEEcCCCCEEEEecCCCcEEe
Q 019006 312 YKLPGHTGSVNESVFHATEPVIGSCSSDKQIYL 344 (347)
Q Consensus 312 ~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~i 344 (347)
.++..+. .+..++|+++++.|..++.++..++
T Consensus 271 ~~~~~~~-~~~~~~f~~d~~~L~it~~~~l~~~ 302 (305)
T 3dr2_A 271 GHIPTPG-TASNCTFDQAQQRLFITGGPCLWML 302 (305)
T ss_dssp EEEECSS-CCCEEEECTTSCEEEEEETTEEEEE
T ss_pred EEEECCC-ceeEEEEeCCCCEEEEEcCCeEEEE
Confidence 6766555 5889999999887777776655443
No 215
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.44 E-value=2.4e-11 Score=115.78 Aligned_cols=243 Identities=15% Similarity=0.161 Sum_probs=151.6
Q ss_pred cCccccEEEEEECCCCCeEE-----EeeCCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEecCCC------
Q 019006 54 TGHQSAVYTMKFNPAGTVIA-----SGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDK------ 122 (347)
Q Consensus 54 ~~h~~~V~~v~~~~~~~~l~-----s~~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg------ 122 (347)
.+|...+..++|||||++|| .|+.+.+|++||+.+.......+.. .....++|+ |++.|+.++.+.
T Consensus 125 ~~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~--~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~ 201 (693)
T 3iuj_A 125 PDGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKD--VKFSGISWL-GNEGFFYSSYDKPDGSEL 201 (693)
T ss_dssp TTSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEE--EESCCCEEE-TTTEEEEEESSCCC----
T ss_pred CCCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCC--ceeccEEEe-CCCEEEEEEecCcccccc
Confidence 35667899999999999888 3444567999999754321111211 113567899 999998887774
Q ss_pred -------eEEEEECCCCce----eeeeec-cCcceeEeecCCCCCCEEEEEcC---CCceEEEeCCCCC-ceeec-CCCC
Q 019006 123 -------TLRAWDVETGKQ----IKKMAE-HNSFVNSCCPSRRGPPLVVSGSD---DGTAKLWDMRQRG-AIQTF-PDKY 185 (347)
Q Consensus 123 -------~i~iwd~~~~~~----~~~~~~-~~~~v~~~~~~~~~~~~~~s~~~---d~~i~iwd~~~~~-~~~~~-~~~~ 185 (347)
.|++|++.++.. +..... +........+++++..++++.+. +..+.++|+.++. ....+ ....
T Consensus 202 ~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~ 281 (693)
T 3iuj_A 202 SARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLD 281 (693)
T ss_dssp ---CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSS
T ss_pred cccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCC
Confidence 399999887642 222222 33345567778887766665543 3578999987653 22333 3322
Q ss_pred ceEEEEEcCCCCeEEEEe-cC---CcEEEEeCCCCce--EEEecCCCCceeEEEECCCCCEEEEEcCCC---cEEEEeCC
Q 019006 186 QITAVSFSDASDKIYTGG-ID---NDVKVWDLRKGEV--SMTLQGHQDMITGMSLSPDGSYLLTNGMDC---KLCIWDMR 256 (347)
Q Consensus 186 ~v~~~~~~~~~~~l~~~~-~d---g~i~iwd~~~~~~--~~~~~~~~~~i~~v~~~~~~~~l~t~~~d~---~i~~wd~~ 256 (347)
..... +++++..|+..+ .+ +.|..+|+.++.. ...+..|...+. .|++++++|+....++ .|.+||+.
T Consensus 282 ~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~ 358 (693)
T 3iuj_A 282 ADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYE 358 (693)
T ss_dssp SCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEECTT
T ss_pred ceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEECC
Confidence 33333 566666665444 33 5799999987643 234444554444 8889999887766544 68888875
Q ss_pred CCCCcCceeEEEeccccccccceEEEEECCCCCEEEEeeCC----CeEEEEeCCCcee
Q 019006 257 PYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSD----RMVYIWDTTSRRI 310 (347)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~d----g~i~vwd~~~~~~ 310 (347)
. .....+... ....+..+.+++++..|+....+ +.|+.||+.+++.
T Consensus 359 g-----~~~~~l~~p---~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~ 408 (693)
T 3iuj_A 359 G-----KRVREVALP---GLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAI 408 (693)
T ss_dssp S-----CEEEEECCS---SSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCE
T ss_pred C-----CeeEEeecC---CCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeE
Confidence 2 122222211 12345566778888877665444 7899999877653
No 216
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.42 E-value=7.2e-12 Score=109.61 Aligned_cols=169 Identities=12% Similarity=0.066 Sum_probs=124.1
Q ss_pred eeEeecCCCCCCEEEEEcCCCceEEEeCCCC-----------CceeecCCCCceEEEEEcCCCCeEEEEecCCcEEEEeC
Q 019006 145 VNSCCPSRRGPPLVVSGSDDGTAKLWDMRQR-----------GAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDL 213 (347)
Q Consensus 145 v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~-----------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~ 213 (347)
+..++.++.. .++++|+.+ .+.+|++... +.....+... |+.++| ++..|+++ .++.|++||+
T Consensus 40 ~nlLais~~~-gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv 113 (388)
T 1xip_A 40 LQNLDISNSK-SLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYSLDL 113 (388)
T ss_dssp CBCEEEETTT-TEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEEEES
T ss_pred ccEEEEcCCC-CEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEEc
Confidence 3444444443 467778776 4566975421 1112233444 999999 88899988 8899999999
Q ss_pred CCCceEEEecCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEEEE
Q 019006 214 RKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTA 293 (347)
Q Consensus 214 ~~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s 293 (347)
++.........|...+.++.+.+. .++++..||.|.+||+.... ... ....+.+++|||+| ++.
T Consensus 114 ~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~----~~~--------~~~~Vs~v~WSpkG--~~v 177 (388)
T 1xip_A 114 EELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKS----TKQ--------LAQNVTSFDVTNSQ--LAV 177 (388)
T ss_dssp SSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCC----EEE--------EEESEEEEEECSSE--EEE
T ss_pred hhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCc----ccc--------ccCCceEEEEcCCc--eEE
Confidence 876655556667777888877654 38888999999999997432 111 13468999999999 788
Q ss_pred eeCCCeEEEEeCCCcee--eEEe------c---CCccCeeeEEEcCCCCEEEE
Q 019006 294 GSSDRMVYIWDTTSRRI--LYKL------P---GHTGSVNESVFHATEPVIGS 335 (347)
Q Consensus 294 gs~dg~i~vwd~~~~~~--~~~~------~---~h~~~v~~~~~~~~~~~l~s 335 (347)
|..||.+++|+...++. ..++ . +|...|.++.|.+++.++++
T Consensus 178 g~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 178 LLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp EETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred EEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 99999999999887775 4556 2 47888999999999998885
No 217
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.41 E-value=4.1e-10 Score=96.26 Aligned_cols=234 Identities=11% Similarity=0.151 Sum_probs=150.6
Q ss_pred eEecCccccEEEEEECCCCC-eEEEeeCCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEEC
Q 019006 51 MLLTGHQSAVYTMKFNPAGT-VIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDV 129 (347)
Q Consensus 51 ~~~~~h~~~V~~v~~~~~~~-~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~ 129 (347)
..+..+........|+|+|+ ++++...++.|..|+..+. ...+..+...+..++++++|+++++...++.|.+|+.
T Consensus 38 ~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~g~---~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~ 114 (305)
T 3dr2_A 38 LTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWREDGT---VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDA 114 (305)
T ss_dssp EEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETTSC---EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECT
T ss_pred EEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCCCC---EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECC
Confidence 34445556678899999998 7778888899999987543 2344445667899999999997776666788999997
Q ss_pred CCCceeeeeecc-----CcceeEeecCCCCCCEEEE----EcC-------------CCceEEEeCCCCCceeecCCCCce
Q 019006 130 ETGKQIKKMAEH-----NSFVNSCCPSRRGPPLVVS----GSD-------------DGTAKLWDMRQRGAIQTFPDKYQI 187 (347)
Q Consensus 130 ~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~~~s----~~~-------------d~~i~iwd~~~~~~~~~~~~~~~v 187 (347)
+ ++. ..+... ...+..+.+.+++ .+.++ |.. .+.|..+|..++...... .....
T Consensus 115 ~-g~~-~~~~~~~~~~~~~~~~~i~~d~dG-~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~~p 190 (305)
T 3dr2_A 115 D-GQA-HLLVGRYAGKRLNSPNDLIVARDG-AIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DLDHP 190 (305)
T ss_dssp T-SCE-EEEECEETTEECSCCCCEEECTTS-CEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EESSE
T ss_pred C-CCE-EEEEeccCCCccCCCCCEEECCCC-CEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-cCCCC
Confidence 6 443 222111 1223455666654 45554 332 245677777555543333 33456
Q ss_pred EEEEEcCCCCeEEEEecC------CcEEEEeCCCCceE--EEe-cCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCC
Q 019006 188 TAVSFSDASDKIYTGGID------NDVKVWDLRKGEVS--MTL-QGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPY 258 (347)
Q Consensus 188 ~~~~~~~~~~~l~~~~~d------g~i~iwd~~~~~~~--~~~-~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~ 258 (347)
..++|+|+++.++.+... +.|++||+..+... ..+ .........++++++|+..++ ..+ .|.+||..
T Consensus 191 ~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~-~~~-gv~~~~~~-- 266 (305)
T 3dr2_A 191 NGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSS-SGT-GVCVFDSD-- 266 (305)
T ss_dssp EEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEEC-CSS-EEEEECTT--
T ss_pred cceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEe-cCC-cEEEECCC--
Confidence 789999999988877655 68999998654311 111 112334567899999995444 444 48899863
Q ss_pred CCcCceeEEEeccccccccceEEEEECCCCCEEEEeeCCCeEEEEe
Q 019006 259 APQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWD 304 (347)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd 304 (347)
...+..+... ..+..++|+|+++.|..++.++ ++.++
T Consensus 267 ---g~~~~~~~~~-----~~~~~~~f~~d~~~L~it~~~~-l~~~~ 303 (305)
T 3dr2_A 267 ---GQLLGHIPTP-----GTASNCTFDQAQQRLFITGGPC-LWMLP 303 (305)
T ss_dssp ---SCEEEEEECS-----SCCCEEEECTTSCEEEEEETTE-EEEEE
T ss_pred ---CCEEEEEECC-----CceeEEEEeCCCCEEEEEcCCe-EEEEE
Confidence 2333344322 2467788999999888888764 44433
No 218
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.38 E-value=2e-09 Score=91.63 Aligned_cols=230 Identities=9% Similarity=0.143 Sum_probs=146.1
Q ss_pred ecCccccEEEEEECCC-CCeEEEeeCCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEECCC
Q 019006 53 LTGHQSAVYTMKFNPA-GTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVET 131 (347)
Q Consensus 53 ~~~h~~~V~~v~~~~~-~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 131 (347)
+..+..--.+..|+|+ +.++++...++.|+.|+..+... ..+ .....+.+++++++|+++++. ++.|.+||.++
T Consensus 8 ~~~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~--~~~-~~~~~~~~i~~~~dG~l~v~~--~~~l~~~d~~~ 82 (297)
T 3g4e_A 8 LPENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV--QRV-TMDAPVSSVALRQSGGYVATI--GTKFCALNWKE 82 (297)
T ss_dssp ECCCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE--EEE-ECSSCEEEEEEBTTSSEEEEE--TTEEEEEETTT
T ss_pred eccCCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcE--EEE-eCCCceEEEEECCCCCEEEEE--CCeEEEEECCC
Confidence 3444455678899985 55677777889999999865332 222 234678999999999965553 56799999887
Q ss_pred Cceeeeeec----cCcceeEeecCCCCCCEEEEEcC---------CCceEEEeCCCCCce-eecCCCCceEEEEEcCCCC
Q 019006 132 GKQIKKMAE----HNSFVNSCCPSRRGPPLVVSGSD---------DGTAKLWDMRQRGAI-QTFPDKYQITAVSFSDASD 197 (347)
Q Consensus 132 ~~~~~~~~~----~~~~v~~~~~~~~~~~~~~s~~~---------d~~i~iwd~~~~~~~-~~~~~~~~v~~~~~~~~~~ 197 (347)
++....... ....+..+.+.+++. ++++... .....+|.+...... .........+.++|+|+++
T Consensus 83 g~~~~~~~~~~~~~~~~~~di~~d~dG~-l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~pngi~~spdg~ 161 (297)
T 3g4e_A 83 QSAVVLATVDNDKKNNRFNDGKVDPAGR-YFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDISNGLDWSLDHK 161 (297)
T ss_dssp TEEEEEEECCTTCSSEEEEEEEECTTSC-EEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBEEEEEECTTSC
T ss_pred CcEEEEEecCCCCCCCCCCCEEECCCCC-EEEecCCcccccccccCCCcEEEEEECCCCEEEEeeccccccceEEcCCCC
Confidence 754322211 122355677777654 5444321 123355554432222 2222233567899999998
Q ss_pred eEEE-EecCCcEEEEeC--CCCce-----EEEecCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEe
Q 019006 198 KIYT-GGIDNDVKVWDL--RKGEV-----SMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILE 269 (347)
Q Consensus 198 ~l~~-~~~dg~i~iwd~--~~~~~-----~~~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~ 269 (347)
.++. .+.++.|.+||+ .++.. ...+..+......++++++|+..++...++.|..||... .+....+.
T Consensus 162 ~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~t----G~~~~~i~ 237 (297)
T 3g4e_A 162 IFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVT----GKRLQTVK 237 (297)
T ss_dssp EEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTT----CCEEEEEE
T ss_pred EEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCC----ceEEEEEE
Confidence 7754 556788999987 44432 222333345678999999998888877788899999753 33444443
Q ss_pred ccccccccceEEEEEC-CCCCEEEEeeC
Q 019006 270 GHQHNFEKNLLKCGWS-PDGSKVTAGSS 296 (347)
Q Consensus 270 ~~~~~~~~~~~~~~~s-~~g~~l~sgs~ 296 (347)
.. ...+.+++|. |+++.|+.++.
T Consensus 238 ~p----~~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 238 LP----VDKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp CS----SSBEEEEEEESGGGCEEEEEEB
T ss_pred CC----CCCceEEEEeCCCCCEEEEEcC
Confidence 32 2357899998 88887765553
No 219
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.36 E-value=2.5e-09 Score=92.29 Aligned_cols=223 Identities=11% Similarity=0.018 Sum_probs=142.0
Q ss_pred eEEEEcCCCC-EEEEecCCCeEEEEECCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeecC
Q 019006 104 LDLHWTTDGS-QIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFP 182 (347)
Q Consensus 104 ~~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~ 182 (347)
.+..|+|++. .+++...++.|..||..+++.. .+. ....+..+.+.+++ .++++ +.+ .|.+||..++.......
T Consensus 52 egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~-~~~~v~~i~~~~dg-~l~v~-~~~-gl~~~d~~~g~~~~~~~ 126 (326)
T 2ghs_A 52 EGPTFDPASGTAWWFNILERELHELHLASGRKT-VHA-LPFMGSALAKISDS-KQLIA-SDD-GLFLRDTATGVLTLHAE 126 (326)
T ss_dssp EEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEE-CSSCEEEEEEEETT-EEEEE-ETT-EEEEEETTTCCEEEEEC
T ss_pred cCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-EEE-CCCcceEEEEeCCC-eEEEE-ECC-CEEEEECCCCcEEEEee
Confidence 4567998754 5566667889999998876542 222 23456666666554 34443 444 48999987766432221
Q ss_pred C-----CCceEEEEEcCCCCeEEEEec------CCcEEEEeCCCCceEEEecCCCCceeEEEECCCCCEEEEE-cCCCcE
Q 019006 183 D-----KYQITAVSFSDASDKIYTGGI------DNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTN-GMDCKL 250 (347)
Q Consensus 183 ~-----~~~v~~~~~~~~~~~l~~~~~------dg~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~-~~d~~i 250 (347)
. ...+..+.++++++..++... .+.|+.+| +++... +..+......++|+|+++.++.+ ..++.|
T Consensus 127 ~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~-~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I 203 (326)
T 2ghs_A 127 LESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTK-LFADISIPNSICFSPDGTTGYFVDTKVNRL 203 (326)
T ss_dssp SSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEE-EEEEESSEEEEEECTTSCEEEEEETTTCEE
T ss_pred CCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEE-eeCCCcccCCeEEcCCCCEEEEEECCCCEE
Confidence 1 135889999999986554432 24566666 454332 22233456789999999876544 557899
Q ss_pred EEEeCC--CC-CCcC-ceeEEEeccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCCceeeEEecCCccCeeeEEE
Q 019006 251 CIWDMR--PY-APQN-RCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVF 326 (347)
Q Consensus 251 ~~wd~~--~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~ 326 (347)
.+||+. .. .... +....+... ......++++++|.+.++...++.|.+||. +++.+..+..+...+.+++|
T Consensus 204 ~~~d~~~~~Gl~~~~~~~~~~~~~~----~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~~~~~af 278 (326)
T 2ghs_A 204 MRVPLDARTGLPTGKAEVFIDSTGI----KGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQTTCPAF 278 (326)
T ss_dssp EEEEBCTTTCCBSSCCEEEEECTTS----SSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCSBEEEEEE
T ss_pred EEEEcccccCCcccCceEEEECCCC----CCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECCCCCcEEEEE
Confidence 999975 22 1111 111111111 123567889999998888777789999998 57777777777778999999
Q ss_pred c-CCCCEE-EEecCC
Q 019006 327 H-ATEPVI-GSCSSD 339 (347)
Q Consensus 327 ~-~~~~~l-~s~s~D 339 (347)
+ +++..| ++...+
T Consensus 279 ~g~d~~~L~vt~~~~ 293 (326)
T 2ghs_A 279 IGPDASRLLVTSARE 293 (326)
T ss_dssp ESTTSCEEEEEEBCT
T ss_pred ecCCCCEEEEEecCC
Confidence 8 887655 444443
No 220
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.36 E-value=2.6e-09 Score=92.22 Aligned_cols=227 Identities=17% Similarity=0.089 Sum_probs=142.0
Q ss_pred ecCccccEEEEEECCCC-CeEEEeeCCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEECCC
Q 019006 53 LTGHQSAVYTMKFNPAG-TVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVET 131 (347)
Q Consensus 53 ~~~h~~~V~~v~~~~~~-~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 131 (347)
+.....-.....|+|++ .++++...++.|..|+..+.. ...+. ....+.+++|+++|+++++. .+ .|.+||..+
T Consensus 44 ~~~~~~~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~--~~~~~-~~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~ 118 (326)
T 2ghs_A 44 DETPMLLGEGPTFDPASGTAWWFNILERELHELHLASGR--KTVHA-LPFMGSALAKISDSKQLIAS-DD-GLFLRDTAT 118 (326)
T ss_dssp ECSCCSBEEEEEEETTTTEEEEEEGGGTEEEEEETTTTE--EEEEE-CSSCEEEEEEEETTEEEEEE-TT-EEEEEETTT
T ss_pred eccCCCCCcCCeEeCCCCEEEEEECCCCEEEEEECCCCc--EEEEE-CCCcceEEEEeCCCeEEEEE-CC-CEEEEECCC
Confidence 33333446788999975 566777778899999986432 22222 24578999999999877765 34 499999887
Q ss_pred Cceeeeeec----cCcceeEeecCCCCCCEEEEEcC------CCceEEEeCCCCCceeecCCCCceEEEEEcCCCCeEEE
Q 019006 132 GKQIKKMAE----HNSFVNSCCPSRRGPPLVVSGSD------DGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIYT 201 (347)
Q Consensus 132 ~~~~~~~~~----~~~~v~~~~~~~~~~~~~~s~~~------d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 201 (347)
++....... ....+..+.+.+.+. ++++... .+.|..+| .++.............++|+|+++.++.
T Consensus 119 g~~~~~~~~~~~~~~~~~~~i~~d~~G~-l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~~~~~~i~~s~dg~~lyv 195 (326)
T 2ghs_A 119 GVLTLHAELESDLPGNRSNDGRMHPSGA-LWIGTMGRKAETGAGSIYHVA--KGKVTKLFADISIPNSICFSPDGTTGYF 195 (326)
T ss_dssp CCEEEEECSSTTCTTEEEEEEEECTTSC-EEEEEEETTCCTTCEEEEEEE--TTEEEEEEEEESSEEEEEECTTSCEEEE
T ss_pred CcEEEEeeCCCCCCCCCCCCEEECCCCC-EEEEeCCCcCCCCceEEEEEe--CCcEEEeeCCCcccCCeEEcCCCCEEEE
Confidence 764322111 113456677777654 5444322 24455555 3332222222234678999999987765
Q ss_pred E-ecCCcEEEEeCC--CC-c-----eEEEecCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEeccc
Q 019006 202 G-GIDNDVKVWDLR--KG-E-----VSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQ 272 (347)
Q Consensus 202 ~-~~dg~i~iwd~~--~~-~-----~~~~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~ 272 (347)
+ +.++.|.+||+. ++ . ....+.........+++.++|++.++...++.|..||.. ...+..+...
T Consensus 196 ~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~~-----g~~~~~i~~~- 269 (326)
T 2ghs_A 196 VDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDTD-----GNHIARYEVP- 269 (326)
T ss_dssp EETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECTT-----CCEEEEEECS-
T ss_pred EECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECCC-----CCEEEEEECC-
Confidence 4 457889999986 55 3 122333334557889999999887777667889999863 2233333322
Q ss_pred cccccceEEEEEC-CCCCEEEEeeC
Q 019006 273 HNFEKNLLKCGWS-PDGSKVTAGSS 296 (347)
Q Consensus 273 ~~~~~~~~~~~~s-~~g~~l~sgs~ 296 (347)
...+.+++|+ +++..|+.++.
T Consensus 270 ---~~~~~~~af~g~d~~~L~vt~~ 291 (326)
T 2ghs_A 270 ---GKQTTCPAFIGPDASRLLVTSA 291 (326)
T ss_dssp ---CSBEEEEEEESTTSCEEEEEEB
T ss_pred ---CCCcEEEEEecCCCCEEEEEec
Confidence 2357889998 88887755543
No 221
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.35 E-value=2.3e-10 Score=109.05 Aligned_cols=237 Identities=16% Similarity=0.135 Sum_probs=145.3
Q ss_pred CcccceeEEEEcCCCCEEEEe-----cCCCeEEEEECCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCC-------
Q 019006 98 GHKNAILDLHWTTDGSQIISA-----SPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDG------- 165 (347)
Q Consensus 98 ~h~~~v~~~~~~~~~~~l~s~-----~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~------- 165 (347)
+|...+..+.|||||++|+-+ +.+..|++||+.+++.+.... .........++ ++. .|+.++.+.
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~-~~~k~~~~~Ws-Dg~-~l~y~~~~~~~~~~~~ 202 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPL-KDVKFSGISWL-GNE-GFFYSSYDKPDGSELS 202 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEE-EEEESCCCEEE-TTT-EEEEEESSCCC-----
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcccc-CCceeccEEEe-CCC-EEEEEEecCccccccc
Confidence 355578889999999988843 333579999999988654321 11112234555 544 445555543
Q ss_pred ------ceEEEeCCCCCc--eeecCC----CCceEEEEEcCCCCeEEEEe----cCCcEEEEeCCCCc-eEEEecCCCCc
Q 019006 166 ------TAKLWDMRQRGA--IQTFPD----KYQITAVSFSDASDKIYTGG----IDNDVKVWDLRKGE-VSMTLQGHQDM 228 (347)
Q Consensus 166 ------~i~iwd~~~~~~--~~~~~~----~~~v~~~~~~~~~~~l~~~~----~dg~i~iwd~~~~~-~~~~~~~~~~~ 228 (347)
.|++|++.+... ...+.. ......+.++|++++++... .++.|+++|+.++. ....+..+...
T Consensus 203 ~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~ 282 (693)
T 3iuj_A 203 ARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDA 282 (693)
T ss_dssp --CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSS
T ss_pred ccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCc
Confidence 388999876542 222222 23467889999999886433 23589999997763 34455555555
Q ss_pred eeEEEECCCCCEEE-EEcCC---CcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEEEEeeCCC---eEE
Q 019006 229 ITGMSLSPDGSYLL-TNGMD---CKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDR---MVY 301 (347)
Q Consensus 229 i~~v~~~~~~~~l~-t~~~d---~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg---~i~ 301 (347)
.... +++++..|+ ....+ +.|..+|+...... . .+.+..+.. .+. .|++++++|+....++ .|+
T Consensus 283 ~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~-~-~~~l~~~~~----~~~--~~s~~g~~lv~~~~~~g~~~l~ 353 (693)
T 3iuj_A 283 DVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPA-H-WRDLIPERQ----QVL--TVHSGSGYLFAEYMVDATARVE 353 (693)
T ss_dssp CEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGG-G-CEEEECCCS----SCE--EEEEETTEEEEEEEETTEEEEE
T ss_pred eEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCcc-c-cEEEecCCC----CEE--EEEEECCEEEEEEEECCeeEEE
Confidence 5444 566666554 44333 57888998753211 1 123333321 233 7899999888766543 689
Q ss_pred EEeCCCceeeEEec-CCccCeeeEEEcCCCCEEEEecCC----CcEEeecC
Q 019006 302 IWDTTSRRILYKLP-GHTGSVNESVFHATEPVIGSCSSD----KQIYLGEI 347 (347)
Q Consensus 302 vwd~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~s~D----~~i~i~~~ 347 (347)
+||+..+. ...+. .+.+.+..+.+++++..++....+ ++|+.+|+
T Consensus 354 ~~d~~g~~-~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~ 403 (693)
T 3iuj_A 354 QFDYEGKR-VREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEP 403 (693)
T ss_dssp EECTTSCE-EEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECT
T ss_pred EEECCCCe-eEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEEC
Confidence 99988554 34443 234567778888888766654443 67777764
No 222
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.32 E-value=3.3e-12 Score=112.37 Aligned_cols=202 Identities=18% Similarity=0.155 Sum_probs=111.6
Q ss_pred CCCEEEEecCCCeEEEEECCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeecCCCC--ceE
Q 019006 111 DGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKY--QIT 188 (347)
Q Consensus 111 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~~~~--~v~ 188 (347)
++..+++++.||.|+.||..+|+.+.++.. ..+....... +..++++++.|+.++.||..+++.+....... .+.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~-~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~ 84 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHV-EEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQ 84 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC------CCEEECTTTCCEEEC-----CCSEECSCCHHHHHT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEc-CCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccc
Confidence 477899999999999999999998887765 2222222222 23467777899999999998877655543321 110
Q ss_pred -EEEEcCCCCeEEEEecCCcEEEEeCCCCceEEEecCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEE
Q 019006 189 -AVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKI 267 (347)
Q Consensus 189 -~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~ 267 (347)
+..+. .+..+++++.++.|+.||.++|+....+..+. ...++|++..+++++.|+.|..||.++.+..... .
T Consensus 85 ~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~--~ 157 (369)
T 2hz6_A 85 ASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNA--T 157 (369)
T ss_dssp TCSCC------CCCCEEEEEEEEECCC--------------------------EEEEEEEEEEECCCSSSSSCCCEE--E
T ss_pred cCceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCC----cccccccCCEEEEEecCCEEEEEECCCCCEEEeE--e
Confidence 00111 34577888899999999999998877766543 2345678889999999999999998765432221 1
Q ss_pred EeccccccccceEEEEECCCC---CEEEEeeCCCeEEEEeCCCceeeEEecCCccCeeeEEEcCCC
Q 019006 268 LEGHQHNFEKNLLKCGWSPDG---SKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATE 330 (347)
Q Consensus 268 ~~~~~~~~~~~~~~~~~s~~g---~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~ 330 (347)
... .....+.++. ..+++++.||.|+.||..+++.+.+..-....+...++++++
T Consensus 158 ~~~--------~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~pv~~~~~~~~dg 215 (369)
T 2hz6_A 158 YFD--------YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNYASPVVAFYVWQREG 215 (369)
T ss_dssp EEE--------ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEECSSCEEEEEECTTSS
T ss_pred ccc--------ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEecCCCceEEEEEecCCc
Confidence 111 0111223332 567788999999999999999988876433323333444444
No 223
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.31 E-value=4.1e-10 Score=106.71 Aligned_cols=269 Identities=12% Similarity=0.122 Sum_probs=172.2
Q ss_pred CCeEEEeeCCCcEEEEeccCCCeeeEEEeCccc----------ce-eEEEEcCCCCEEEEecCCCeEEEEECCCCceeee
Q 019006 69 GTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKN----------AI-LDLHWTTDGSQIISASPDKTLRAWDVETGKQIKK 137 (347)
Q Consensus 69 ~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~----------~v-~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 137 (347)
+..|++++.++.|+.+|... .+.......... .+ ..+.. ++..|+.++.|+.+..+|..+|+.+.+
T Consensus 77 ~g~vyv~~~~~~v~AlD~~t-G~~~W~~~~~~~~~~~~~~~~~~~~~~~a~--~~~~v~v~~~dg~l~alD~~tG~~~W~ 153 (677)
T 1kb0_A 77 DGIMYVSASWSVVHAIDTRT-GNRIWTYDPQIDRSTGFKGCCDVVNRGVAL--WKGKVYVGAWDGRLIALDAATGKEVWH 153 (677)
T ss_dssp TTEEEEECGGGCEEEEETTT-TEEEEEECCCCCGGGGGGSSSCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred CCEEEEECCCCeEEEEECCC-CcEEEEEcCCCCccccccccccCCCCCceE--ECCEEEEEcCCCEEEEEECCCCCEEee
Confidence 55666777788888888753 233333322111 00 12222 356888889999999999999999887
Q ss_pred eecc-C----cceeEeecCCCCCCEEEEEcC------CCceEEEeCCCCCceeecCCCC---------------------
Q 019006 138 MAEH-N----SFVNSCCPSRRGPPLVVSGSD------DGTAKLWDMRQRGAIQTFPDKY--------------------- 185 (347)
Q Consensus 138 ~~~~-~----~~v~~~~~~~~~~~~~~s~~~------d~~i~iwd~~~~~~~~~~~~~~--------------------- 185 (347)
+... . ..+.. .+...+ ..++.++. ++.|..+|.++++.+..+....
T Consensus 154 ~~~~~~~~~~~~~~~-~p~v~~-~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~ 231 (677)
T 1kb0_A 154 QNTFEGQKGSLTITG-APRVFK-GKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDP 231 (677)
T ss_dssp EETTTTCCSSCBCCS-CCEEET-TEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCG
T ss_pred ecCCcCcCcCccccc-CcEEEC-CEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccc
Confidence 7654 1 01110 000112 24444443 6899999999988775542210
Q ss_pred ------------ceEEEEEcCCCCeEEEEecCC-------------------cEEEEeCCCCceEEEecC--CC------
Q 019006 186 ------------QITAVSFSDASDKIYTGGIDN-------------------DVKVWDLRKGEVSMTLQG--HQ------ 226 (347)
Q Consensus 186 ------------~v~~~~~~~~~~~l~~~~~dg-------------------~i~iwd~~~~~~~~~~~~--~~------ 226 (347)
....++++++++.++.++.++ .|..+|.++++....++. |.
T Consensus 232 ~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~ 311 (677)
T 1kb0_A 232 SGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTS 311 (677)
T ss_dssp GGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCC
T ss_pred cCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCccccccc
Confidence 113567888889998887664 499999999998877654 21
Q ss_pred -CceeEEEECCCC---CEEEEEcCCCcEEEEeCCCCCCcCceeEEEecccccc------cc-------------------
Q 019006 227 -DMITGMSLSPDG---SYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNF------EK------------------- 277 (347)
Q Consensus 227 -~~i~~v~~~~~~---~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~------~~------------------- 277 (347)
....-+....+| ..++.++.+|.+.++|..+.+. +...+...... ..
T Consensus 312 ~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~----l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P 387 (677)
T 1kb0_A 312 TQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKF----ISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVP 387 (677)
T ss_dssp CSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCE----EEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSS
T ss_pred CCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCE----eccccccccCcccccCCCCceeeccccCcCCCccEECc
Confidence 111122333366 6789999999999999876432 21111100000 00
Q ss_pred ------ceEEEEECCCCCEEEEeeC-------------------------------------------CCeEEEEeCCCc
Q 019006 278 ------NLLKCGWSPDGSKVTAGSS-------------------------------------------DRMVYIWDTTSR 308 (347)
Q Consensus 278 ------~~~~~~~s~~g~~l~sgs~-------------------------------------------dg~i~vwd~~~~ 308 (347)
.-..++|+|++.++++... .|.|+.||+.++
T Consensus 388 ~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG 467 (677)
T 1kb0_A 388 GPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQ 467 (677)
T ss_dssp CTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTT
T ss_pred CcccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCC
Confidence 0014678899888887543 278999999999
Q ss_pred eeeEEecCCccCeeeEEEcCCCCEEEEecCCCcEEeecC
Q 019006 309 RILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGEI 347 (347)
Q Consensus 309 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~i~~~ 347 (347)
+.+.+++ +...++...+...+.++..++.|+.++++|.
T Consensus 468 ~~~W~~~-~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~ 505 (677)
T 1kb0_A 468 KAAWSVE-HVSPWNGGTLTTAGNVVFQGTADGRLVAYHA 505 (677)
T ss_dssp EEEEEEE-ESSSCCCCEEEETTTEEEEECTTSEEEEEET
T ss_pred cEEeecC-CCCCCcCcceEeCCCEEEEECCCCcEEEEEC
Confidence 9998876 3445666677788888888999999999874
No 224
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.29 E-value=4.1e-10 Score=98.19 Aligned_cols=245 Identities=6% Similarity=-0.080 Sum_probs=154.6
Q ss_pred EEEECCCCCeEEEee----------CCCcEEEEeccCCCeeeEEEeCc-------ccceeEEEEcCCCCEEEEecC--CC
Q 019006 62 TMKFNPAGTVIASGS----------HDRDIFLWHVHGDCKNFMVLKGH-------KNAILDLHWTTDGSQIISASP--DK 122 (347)
Q Consensus 62 ~v~~~~~~~~l~s~~----------~d~~v~~w~~~~~~~~~~~~~~h-------~~~v~~~~~~~~~~~l~s~~~--dg 122 (347)
.+.++|+++.|+++. .++.|.+||.... +....+... ......++++|||++++.+.. +.
T Consensus 69 ~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~-~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~ 147 (368)
T 1mda_H 69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTF-LPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSA 147 (368)
T ss_dssp EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTC-CEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSC
T ss_pred ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCC-CEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCC
Confidence 799999999888886 3688999999643 334444322 123467899999999998864 45
Q ss_pred eEEE--EECCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCC-----CCcee----ecC-CCCceEEE
Q 019006 123 TLRA--WDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQ-----RGAIQ----TFP-DKYQITAV 190 (347)
Q Consensus 123 ~i~i--wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~-----~~~~~----~~~-~~~~v~~~ 190 (347)
.+.+ +|..+ +..+..... ....+.+...+++.+.|+++.+.|+.. ++... .+. .....
T Consensus 148 ~v~V~~iD~~t---v~~i~v~~~----~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~--- 217 (368)
T 1mda_H 148 AAGLSVPGASD---DQLTKSASC----FHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA--- 217 (368)
T ss_dssp EEEEEETTTEE---EEEEECSSC----CCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCE---
T ss_pred eEEEEEEchhh---ceEEECCCc----eEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCcc---
Confidence 7888 88876 334422111 111233445666777889988888876 32221 111 11122
Q ss_pred EEcCCCCeEEEEecCCcEEEEeCCCCc--eEEEecC-------C---CCceeEEEECCCCCEEEEEcC---------CCc
Q 019006 191 SFSDASDKIYTGGIDNDVKVWDLRKGE--VSMTLQG-------H---QDMITGMSLSPDGSYLLTNGM---------DCK 249 (347)
Q Consensus 191 ~~~~~~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~-------~---~~~i~~v~~~~~~~~l~t~~~---------d~~ 249 (347)
. .+++..++..+. +.+.+.|..... ....+.- + ......++++|++++++.+.. ++.
T Consensus 218 ~-~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~ 295 (368)
T 1mda_H 218 Q-ANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAEN 295 (368)
T ss_dssp E-ETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEE
T ss_pred c-cccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCC
Confidence 3 556666666666 999999986542 2222211 0 011122789999988876532 235
Q ss_pred EEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCC-EEEEee-CCCeEEEEeCCCceeeEEecCCccCeeeEEEc
Q 019006 250 LCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGS-KVTAGS-SDRMVYIWDTTSRRILYKLPGHTGSVNESVFH 327 (347)
Q Consensus 250 i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~-~l~sgs-~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~ 327 (347)
+.++|+... +.+..+.. ......++|+|||+ ++++.. .++.|.++|+.+++.+.+++... ..+.++++
T Consensus 296 ~~ViD~~t~----~vv~~i~v-----g~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~vg~-~P~~i~~~ 365 (368)
T 1mda_H 296 TSSVTASVG----QTSGPISN-----GHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDK-GPESLSVQ 365 (368)
T ss_dssp EEEEESSSC----CEEECCEE-----EEEECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCCS-CCCEEECC
T ss_pred EEEEECCCC----eEEEEEEC-----CCCcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEECCC-CCCEEEee
Confidence 669998753 22333321 12467889999998 455666 58999999999999999987543 45666766
Q ss_pred CC
Q 019006 328 AT 329 (347)
Q Consensus 328 ~~ 329 (347)
++
T Consensus 366 ~~ 367 (368)
T 1mda_H 366 NE 367 (368)
T ss_dssp CC
T ss_pred cC
Confidence 54
No 225
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.27 E-value=1.8e-08 Score=88.61 Aligned_cols=258 Identities=12% Similarity=0.101 Sum_probs=159.1
Q ss_pred CCCeEEEeeCCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEECCCCceeeeeeccCcce--
Q 019006 68 AGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFV-- 145 (347)
Q Consensus 68 ~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v-- 145 (347)
++..++.++.++.|+.+|.... +.................. +..++.++.++.+..+|..+++.+..........
T Consensus 102 ~~~~v~v~~~~g~l~a~d~~tG-~~~W~~~~~~~~~~~p~~~--~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~ 178 (376)
T 3q7m_A 102 SGGHVYIGSEKAQVYALNTSDG-TVAWQTKVAGEALSRPVVS--DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSL 178 (376)
T ss_dssp ETTEEEEEETTSEEEEEETTTC-CEEEEEECSSCCCSCCEEE--TTEEEEECTTSEEEEEETTTCCEEEEEECCC-----
T ss_pred eCCEEEEEcCCCEEEEEECCCC-CEEEEEeCCCceEcCCEEE--CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceee
Confidence 3556777888999999997533 2222222221111111122 4578888899999999999998877665432211
Q ss_pred ---eEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeecCCCCc-----eEE---EEEcC--CCCeEEEEecCCcEEEEe
Q 019006 146 ---NSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-----ITA---VSFSD--ASDKIYTGGIDNDVKVWD 212 (347)
Q Consensus 146 ---~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~~~~~-----v~~---~~~~~--~~~~l~~~~~dg~i~iwd 212 (347)
..... . ...++.++.++.+..+|..+++.......... +.. +...| .+..++.++.++.+..+|
T Consensus 179 ~~~~~~~~--~-~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d 255 (376)
T 3q7m_A 179 RGESAPTT--A-FGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALD 255 (376)
T ss_dssp CCCCCCEE--E-TTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEE
T ss_pred cCCCCcEE--E-CCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEE
Confidence 01111 1 23577788899999999988877655432210 000 00111 246788888999999999
Q ss_pred CCCCceEEEecCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEEE
Q 019006 213 LRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVT 292 (347)
Q Consensus 213 ~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~ 292 (347)
.++++....... .....+.. ++..++.++.++.+..+|..+.+ ........... ....... .+..|+
T Consensus 256 ~~tG~~~w~~~~--~~~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~----~~w~~~~~~~~---~~~~~~~--~~~~l~ 322 (376)
T 3q7m_A 256 LRSGQIMWKREL--GSVNDFIV--DGNRIYLVDQNDRVMALTIDGGV----TLWTQSDLLHR---LLTSPVL--YNGNLV 322 (376)
T ss_dssp TTTCCEEEEECC--CCEEEEEE--ETTEEEEEETTCCEEEEETTTCC----EEEEECTTTTS---CCCCCEE--ETTEEE
T ss_pred CCCCcEEeeccC--CCCCCceE--ECCEEEEEcCCCeEEEEECCCCc----EEEeecccCCC---cccCCEE--ECCEEE
Confidence 999987766542 22344444 36678888889999999987542 22222211110 1111111 357888
Q ss_pred EeeCCCeEEEEeCCCceeeEEecCCccCeee-EEEcCCCCEEEEecCCCcEEeec
Q 019006 293 AGSSDRMVYIWDTTSRRILYKLPGHTGSVNE-SVFHATEPVIGSCSSDKQIYLGE 346 (347)
Q Consensus 293 sgs~dg~i~vwd~~~~~~~~~~~~h~~~v~~-~~~~~~~~~l~s~s~D~~i~i~~ 346 (347)
.++.+|.|+++|..+++.+.+.+.....+.. ... . +..|..++.||.|+.++
T Consensus 323 v~~~~g~l~~~d~~tG~~~~~~~~~~~~~~~~~~~-~-~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 323 VGDSEGYLHWINVEDGRFVAQQKVDSSGFQTEPVA-A-DGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp EECTTSEEEEEETTTCCEEEEEECCTTCBCSCCEE-E-TTEEEEEBTTSCEEEEE
T ss_pred EEeCCCeEEEEECCCCcEEEEEecCCCcceeCCEE-E-CCEEEEEeCCCEEEEEe
Confidence 9999999999999999998877654444332 222 2 45677788899999876
No 226
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.26 E-value=2.7e-10 Score=99.15 Aligned_cols=222 Identities=10% Similarity=0.024 Sum_probs=143.1
Q ss_pred cceeEEEEcCCCCEEEEec--CCCeEEEEECCCCceeeeee-------ccCcceeEeecCCCCCCEEEEEcC-----CCc
Q 019006 101 NAILDLHWTTDGSQIISAS--PDKTLRAWDVETGKQIKKMA-------EHNSFVNSCCPSRRGPPLVVSGSD-----DGT 166 (347)
Q Consensus 101 ~~v~~~~~~~~~~~l~s~~--~dg~i~iwd~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~~~~s~~~-----d~~ 166 (347)
.....++++++|+.+++.. .++.++||.+.+++. ..+. .+...+..+.+.+.+ .++++-.. ++.
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~-~~~p~~~~~~~~~~~~p~gv~~d~~g-~L~v~D~g~~~~~~~~ 94 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGL-IPFPPQSGNAIITFDTVLGIKSDGNG-IVWMLDNGNQSKSVPK 94 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEE-EESCCCCSSCCCCCSCEEEEEECSSS-EEEEEECHHHHTSCCE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCe-ecCCCcccCcccceeEeeEEEEcCCC-cEEEEcCCCCcCCCCe
Confidence 5788999999999888863 234355665544442 2221 122455667776664 35554333 578
Q ss_pred eEEEeCCCCCceeecCC-------CCceEEEEEcCCCCeEEEE-e---cCCcEEEEeCCCCceEEEecCCCCcee-EEEE
Q 019006 167 AKLWDMRQRGAIQTFPD-------KYQITAVSFSDASDKIYTG-G---IDNDVKVWDLRKGEVSMTLQGHQDMIT-GMSL 234 (347)
Q Consensus 167 i~iwd~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~-~---~dg~i~iwd~~~~~~~~~~~~~~~~i~-~v~~ 234 (347)
|.+||+.+++.+..+.. ...+..+++++++..++.+ . .++.|.+||+.+++....+.+|..... ...+
T Consensus 95 i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~ 174 (343)
T 2qe8_A 95 LVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDL 174 (343)
T ss_dssp EEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCC
T ss_pred EEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccce
Confidence 99999988775554421 1246889999876665544 3 578999999998877666655432111 1334
Q ss_pred CCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEEEEeeCCC-eEEEEeCCC---c--
Q 019006 235 SPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDR-MVYIWDTTS---R-- 308 (347)
Q Consensus 235 ~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg-~i~vwd~~~---~-- 308 (347)
.++|..+.+.+.++.++.|.. ....++|+|||+.|+.+..++ .++.++... +
T Consensus 175 ~~~g~~~~~~~~~g~~~~~~~----------------------~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~ 232 (343)
T 2qe8_A 175 VIDGVPVQIGQPDGTVIRPHL----------------------GVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQL 232 (343)
T ss_dssp EETTEECBEECTTSCEECCCC----------------------CEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTC
T ss_pred eECCEEEEeccCCCceeceec----------------------ccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCC
Confidence 456666666677777655531 245688999999998887665 666665421 1
Q ss_pred ---eeeE--EecCCccCeeeEEEcCCCCEEEEecCCCcEEeec
Q 019006 309 ---RILY--KLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGE 346 (347)
Q Consensus 309 ---~~~~--~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~i~~ 346 (347)
+... ...++.+....+++++++.++++...++.|.+||
T Consensus 233 ~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d 275 (343)
T 2qe8_A 233 TDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVIT 275 (343)
T ss_dssp CHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEE
T ss_pred ChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEE
Confidence 1110 1224445678899999999999999999999987
No 227
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.25 E-value=2.8e-09 Score=101.22 Aligned_cols=274 Identities=13% Similarity=0.139 Sum_probs=170.0
Q ss_pred CCeEEEeeCCCcEEEEeccCCCeeeEEEeCccc----------ce-eEEEEcCCCCEEEEecCCCeEEEEECCCCceeee
Q 019006 69 GTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKN----------AI-LDLHWTTDGSQIISASPDKTLRAWDVETGKQIKK 137 (347)
Q Consensus 69 ~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~----------~v-~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 137 (347)
+..+++++.++.|+.+|.... +.......+.. .+ ..+.. .+..|+.++.|+.+..+|..+|+.+..
T Consensus 70 ~g~vyv~~~~~~v~AlD~~tG-~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~v~v~~~dg~l~AlDa~TG~~~W~ 146 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDARDG-RLIWKYDPQSDRHRAGEACCDAVNRGVAV--WKGKVYVGVLDGRLEAIDAKTGQRAWS 146 (689)
T ss_dssp TTEEEEECGGGCEEEEETTTC-CEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred CCEEEEEcCCCeEEEEECCCC-ceeEEEcCCCCccccccccccCCCCccEE--ECCEEEEEccCCEEEEEECCCCCEeee
Confidence 567777788888999987533 33333322211 00 11122 356888899999999999999998877
Q ss_pred eecc-C-cceeEeecCC--CCCCEEEEEc------CCCceEEEeCCCCCceeecCC---C--------------------
Q 019006 138 MAEH-N-SFVNSCCPSR--RGPPLVVSGS------DDGTAKLWDMRQRGAIQTFPD---K-------------------- 184 (347)
Q Consensus 138 ~~~~-~-~~v~~~~~~~--~~~~~~~s~~------~d~~i~iwd~~~~~~~~~~~~---~-------------------- 184 (347)
+... . .........+ .+. .++.++ .++.|..||.++++.+..+.. .
T Consensus 147 ~~~~~~~~~~~~~~~sP~v~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~ 225 (689)
T 1yiq_A 147 VDTRADHKRSYTITGAPRVVNG-KVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGD 225 (689)
T ss_dssp EECCSCTTSCCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSS
T ss_pred ecCcCCCCCCccccCCcEEECC-EEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCc
Confidence 6542 1 1101111111 122 344443 368999999999887654421 0
Q ss_pred ---------CceEEEEEcCCCCeEEEEecCCc-------------------EEEEeCCCCceEEEecC--CC-------C
Q 019006 185 ---------YQITAVSFSDASDKIYTGGIDND-------------------VKVWDLRKGEVSMTLQG--HQ-------D 227 (347)
Q Consensus 185 ---------~~v~~~~~~~~~~~l~~~~~dg~-------------------i~iwd~~~~~~~~~~~~--~~-------~ 227 (347)
.....++++++.+.++.++.++. |..+|.++++.+..++. |. .
T Consensus 226 ~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~ 305 (689)
T 1yiq_A 226 AYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQ 305 (689)
T ss_dssp THHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCS
T ss_pred eeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCC
Confidence 00125778888899998887763 99999999998887764 21 1
Q ss_pred ceeEEEECCCCC---EEEEEcCCCcEEEEeCCCCCCcCc-------eeEEEeccc-------------ccccc-------
Q 019006 228 MITGMSLSPDGS---YLLTNGMDCKLCIWDMRPYAPQNR-------CVKILEGHQ-------------HNFEK------- 277 (347)
Q Consensus 228 ~i~~v~~~~~~~---~l~t~~~d~~i~~wd~~~~~~~~~-------~~~~~~~~~-------------~~~~~------- 277 (347)
.........+|+ .++.++.+|.++++|.++.+.... ....+.... .....
T Consensus 306 ~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~ 385 (689)
T 1yiq_A 306 HMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAF 385 (689)
T ss_dssp CEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCT
T ss_pred CcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCc
Confidence 111112222454 788899999999999876542210 000000000 00000
Q ss_pred ----ceEEEEECCCCCEEEEeeC---------------------------------------------CCeEEEEeCCCc
Q 019006 278 ----NLLKCGWSPDGSKVTAGSS---------------------------------------------DRMVYIWDTTSR 308 (347)
Q Consensus 278 ----~~~~~~~s~~g~~l~sgs~---------------------------------------------dg~i~vwd~~~~ 308 (347)
....++|+|+..++++.+. +|.|+.||+.++
T Consensus 386 ~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG 465 (689)
T 1yiq_A 386 WGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQ 465 (689)
T ss_dssp TCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTT
T ss_pred ccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCC
Confidence 0112578888888877532 378999999999
Q ss_pred eeeEEecCCccCeeeEEEcCCCCEEEEecCCCcEEeecC
Q 019006 309 RILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGEI 347 (347)
Q Consensus 309 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~i~~~ 347 (347)
+.+.+++.+. .+....+...+.+++.++.|+.++.+|.
T Consensus 466 ~~~W~~~~~~-~~~~g~~~tagglvf~gt~dg~l~a~D~ 503 (689)
T 1yiq_A 466 QAAWEVPYVT-IFNGGTLSTAGNLVFEGSADGRVIAYAA 503 (689)
T ss_dssp EEEEEEEESS-SCCCCEEEETTTEEEEECTTSEEEEEET
T ss_pred CeEeEccCCC-CccCccceECCCEEEEECCCCcEEEEEC
Confidence 9999887554 3444567778889999999999999873
No 228
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.25 E-value=8.2e-08 Score=80.14 Aligned_cols=249 Identities=9% Similarity=0.044 Sum_probs=149.9
Q ss_pred eEEEeeCCCcEEEEeccCCCee----eEEEeCcccceeEEEEcCCCCEEE-EecCCCeEEEEECCCCceeeeeeccCcce
Q 019006 71 VIASGSHDRDIFLWHVHGDCKN----FMVLKGHKNAILDLHWTTDGSQII-SASPDKTLRAWDVETGKQIKKMAEHNSFV 145 (347)
Q Consensus 71 ~l~s~~~d~~v~~w~~~~~~~~----~~~~~~h~~~v~~~~~~~~~~~l~-s~~~dg~i~iwd~~~~~~~~~~~~~~~~v 145 (347)
+|..+.. +.|+.+++.+.... ...+.........++|++++..|+ +-..++.|..++.........+.......
T Consensus 3 ~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p 81 (267)
T 1npe_A 3 HLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSP 81 (267)
T ss_dssp EEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCE
T ss_pred EEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCc
Confidence 3444333 36777777643211 111222234568899999766555 44567899999987654322222222344
Q ss_pred eEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeecCCC-CceEEEEEcCCCCeEEEEec---CCcEEEEeCCCCceEEE
Q 019006 146 NSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDK-YQITAVSFSDASDKIYTGGI---DNDVKVWDLRKGEVSMT 221 (347)
Q Consensus 146 ~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~---dg~i~iwd~~~~~~~~~ 221 (347)
..+++.+.+..++++-...+.|.++++............ .....++++|++..++.+.. .+.|..+++........
T Consensus 82 ~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~ 161 (267)
T 1npe_A 82 EGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRIL 161 (267)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEE
T ss_pred cEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEE
Confidence 556666655667777777889999998654332222222 46788999998777766554 36888888764322221
Q ss_pred ecCCCCceeEEEECCCCCEEE-EEcCCCcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEEEEe-eCCCe
Q 019006 222 LQGHQDMITGMSLSPDGSYLL-TNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAG-SSDRM 299 (347)
Q Consensus 222 ~~~~~~~i~~v~~~~~~~~l~-t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sg-s~dg~ 299 (347)
..........+++++++..|. +....+.|..+|.... ......... .....++. ++..|..+ ...+.
T Consensus 162 ~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~----~~~~~~~~~-----~~P~gi~~--d~~~lyva~~~~~~ 230 (267)
T 1npe_A 162 AQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQP----GRRKVLEGL-----QYPFAVTS--YGKNLYYTDWKTNS 230 (267)
T ss_dssp ECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEE----EEEEEEECC-----CSEEEEEE--ETTEEEEEETTTTE
T ss_pred EECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCC----ceEEEecCC-----CCceEEEE--eCCEEEEEECCCCe
Confidence 222234578899999876665 4455678999997531 111122211 12234444 34555544 45689
Q ss_pred EEEEeCCCceeeEEecCCc-cCeeeEEEcCCCC
Q 019006 300 VYIWDTTSRRILYKLPGHT-GSVNESVFHATEP 331 (347)
Q Consensus 300 i~vwd~~~~~~~~~~~~h~-~~v~~~~~~~~~~ 331 (347)
|+++|..+++.+..+.... .....+++.|++.
T Consensus 231 v~~~d~~~g~~~~~i~~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 231 VIAMDLAISKEMDTFHPHKQTRLYGITIALSQC 263 (267)
T ss_dssp EEEEETTTTEEEEEECCSSCCCCCCEEEECSCC
T ss_pred EEEEeCCCCCceEEEccccccccceeeecCccC
Confidence 9999999999888876443 3578888888864
No 229
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.24 E-value=2.2e-08 Score=87.98 Aligned_cols=258 Identities=11% Similarity=0.062 Sum_probs=157.4
Q ss_pred CCCeEEEeeCCCcEEEEeccCCCeeeEEEeCc---------ccceeEEEEcCCCCEEEEecCCCeEEEEECCCCceeeee
Q 019006 68 AGTVIASGSHDRDIFLWHVHGDCKNFMVLKGH---------KNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKM 138 (347)
Q Consensus 68 ~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h---------~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 138 (347)
.+..+++++.++.|+.+|..... ........ ...+.. ....++..++.++.++.+..+|..+++.+...
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~-~~W~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~ 129 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGK-EIWSVSLAEKDGWFSKEPALLSG-GVTVSGGHVYIGSEKAQVYALNTSDGTVAWQT 129 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCC-EEEEEECCC---CCSCCCCCEEE-EEEEETTEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred ECCEEEEEcCCCeEEEEEccCCc-eeeeecCccccccccccCccccc-CceEeCCEEEEEcCCCEEEEEECCCCCEEEEE
Confidence 35677778888889999875322 22222221 112222 12224567888889999999999999887666
Q ss_pred eccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeecCCCCce------EEEEEcCCCCeEEEEecCCcEEEEe
Q 019006 139 AEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQI------TAVSFSDASDKIYTGGIDNDVKVWD 212 (347)
Q Consensus 139 ~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~~~~~v------~~~~~~~~~~~l~~~~~dg~i~iwd 212 (347)
............. ...++.++.++.+..+|.++++.+..+.....+ ...... +..++.++.++.+..+|
T Consensus 130 ~~~~~~~~~p~~~---~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~--~~~v~~g~~~g~l~~~d 204 (376)
T 3q7m_A 130 KVAGEALSRPVVS---DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA--FGAAVVGGDNGRVSAVL 204 (376)
T ss_dssp ECSSCCCSCCEEE---TTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE--TTEEEECCTTTEEEEEE
T ss_pred eCCCceEcCCEEE---CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE--CCEEEEEcCCCEEEEEE
Confidence 5433221111111 236777889999999999988877655432221 111222 46788888999999999
Q ss_pred CCCCceEEEecCCCCc-------eeEEEECC--CCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEeccccccccceEEEE
Q 019006 213 LRKGEVSMTLQGHQDM-------ITGMSLSP--DGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCG 283 (347)
Q Consensus 213 ~~~~~~~~~~~~~~~~-------i~~v~~~~--~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (347)
..+++........... +..+.-.| .+..++.++.++.+..+|....+ ....... .......
T Consensus 205 ~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~----~~w~~~~------~~~~~~~ 274 (376)
T 3q7m_A 205 MEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQ----IMWKREL------GSVNDFI 274 (376)
T ss_dssp TTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCC----EEEEECC------CCEEEEE
T ss_pred CCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCc----EEeeccC------CCCCCce
Confidence 9999887665432100 00011111 25677788889999999987532 2221111 1122222
Q ss_pred ECCCCCEEEEeeCCCeEEEEeCCCceeeEEecCC-ccCeeeEEEcCCCCEEEEecCCCcEEeec
Q 019006 284 WSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGH-TGSVNESVFHATEPVIGSCSSDKQIYLGE 346 (347)
Q Consensus 284 ~s~~g~~l~sgs~dg~i~vwd~~~~~~~~~~~~h-~~~v~~~~~~~~~~~l~s~s~D~~i~i~~ 346 (347)
.++..|+.++.++.|+.+|..+++.+.+.... ...+..... .+..|..++.+|.++.+|
T Consensus 275 --~~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~--~~~~l~v~~~~g~l~~~d 334 (376)
T 3q7m_A 275 --VDGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVL--YNGNLVVGDSEGYLHWIN 334 (376)
T ss_dssp --EETTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEE--ETTEEEEECTTSEEEEEE
T ss_pred --EECCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEE--ECCEEEEEeCCCeEEEEE
Confidence 24678888899999999999999988877622 222222233 245677777888888776
No 230
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.23 E-value=2.7e-09 Score=101.33 Aligned_cols=254 Identities=14% Similarity=0.128 Sum_probs=152.6
Q ss_pred CCeEEEeeCCCcEEEEeccCCCeeeEEEeC--cccceeEEEEcC---CCCEEEEec------CCCeEEEEECCCCceeee
Q 019006 69 GTVIASGSHDRDIFLWHVHGDCKNFMVLKG--HKNAILDLHWTT---DGSQIISAS------PDKTLRAWDVETGKQIKK 137 (347)
Q Consensus 69 ~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~--h~~~v~~~~~~~---~~~~l~s~~------~dg~i~iwd~~~~~~~~~ 137 (347)
+..++.++.|+.|+.+|.... +....... +......+..+| ++ .++.++ .+|.|+.||..+|+.+..
T Consensus 121 ~g~v~v~~~dg~l~AlDa~TG-~~~W~~~~~~~~~~~~~~~~sP~v~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~ 198 (689)
T 1yiq_A 121 KGKVYVGVLDGRLEAIDAKTG-QRAWSVDTRADHKRSYTITGAPRVVNG-KVVIGNGGAEFGVRGYVTAYDAETGKEAWR 198 (689)
T ss_dssp TTEEEEECTTSEEEEEETTTC-CEEEEEECCSCTTSCCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEE
T ss_pred CCEEEEEccCCEEEEEECCCC-CEeeeecCcCCCCCCccccCCcEEECC-EEEEEeCCCccCCCCEEEEEECCCCcEEEE
Confidence 457788889999999998533 23222222 111111111112 34 444443 378999999999998876
Q ss_pred eeccC---c---------------------------ce-eEeecCCCCCCEEEEEcCCCc-------------------e
Q 019006 138 MAEHN---S---------------------------FV-NSCCPSRRGPPLVVSGSDDGT-------------------A 167 (347)
Q Consensus 138 ~~~~~---~---------------------------~v-~~~~~~~~~~~~~~s~~~d~~-------------------i 167 (347)
+.... . .+ ....+.+. ..+++.++.++. |
T Consensus 199 ~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~-~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v 277 (689)
T 1yiq_A 199 FYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPE-LNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSI 277 (689)
T ss_dssp EESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETT-TTEEEEECCCEESSCHHHHHTTCSCCTTTTEE
T ss_pred ecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCC-CCEEEEeCCCCCccccCCCCCCCCCceeeeeE
Confidence 64210 0 00 01222232 346777777653 8
Q ss_pred EEEeCCCCCceeecCC---C-------CceEEEEEcCCCC---eEEEEecCCcEEEEeCCCCceEEEecCCC--------
Q 019006 168 KLWDMRQRGAIQTFPD---K-------YQITAVSFSDASD---KIYTGGIDNDVKVWDLRKGEVSMTLQGHQ-------- 226 (347)
Q Consensus 168 ~iwd~~~~~~~~~~~~---~-------~~v~~~~~~~~~~---~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-------- 226 (347)
..+|.++++.+..+.. . ..........++. .++.++.+|.++++|.++++.+.......
T Consensus 278 ~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~ 357 (689)
T 1yiq_A 278 VAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMD 357 (689)
T ss_dssp EEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEE
T ss_pred EEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccC
Confidence 9999999988765532 1 1122222222443 68889999999999999998764321100
Q ss_pred --------------------C-----------ceeEEEECCCCCEEEEEcC-----------------------------
Q 019006 227 --------------------D-----------MITGMSLSPDGSYLLTNGM----------------------------- 246 (347)
Q Consensus 227 --------------------~-----------~i~~v~~~~~~~~l~t~~~----------------------------- 246 (347)
. .-..++|+|+...+++...
T Consensus 358 ~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 437 (689)
T 1yiq_A 358 MKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTG 437 (689)
T ss_dssp TTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEEC
T ss_pred ccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCcccc
Confidence 0 0123788888777776532
Q ss_pred ----------------CCcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCCcee
Q 019006 247 ----------------DCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRI 310 (347)
Q Consensus 247 ----------------d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~ 310 (347)
+|.|..||+.+. +.+-..+.+. ......+...+.+++.|+.||.|+.||.+++++
T Consensus 438 ~~p~~~~~~~~~~~~~~g~l~A~D~~tG----~~~W~~~~~~-----~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~ 508 (689)
T 1yiq_A 438 MMPEGAEGLLEMAKSWSGKLIAWDPVKQ----QAAWEVPYVT-----IFNGGTLSTAGNLVFEGSADGRVIAYAADTGEK 508 (689)
T ss_dssp CCCSSHHHHHHHHTTCEEEEEEEETTTT----EEEEEEEESS-----SCCCCEEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred ccCcccccCCCCCCCcceeEEEEECCCC----CeEeEccCCC-----CccCccceECCCEEEEECCCCcEEEEECCCCcc
Confidence 366888887643 2222222221 122234556788999999999999999999999
Q ss_pred eEEecCCccCe-eeEEEcCCCCEEE
Q 019006 311 LYKLPGHTGSV-NESVFHATEPVIG 334 (347)
Q Consensus 311 ~~~~~~h~~~v-~~~~~~~~~~~l~ 334 (347)
+.+++...+.+ .-+.|..+++..+
T Consensus 509 lw~~~~~~~~~~~p~ty~~~G~qyv 533 (689)
T 1yiq_A 509 LWEQPAASGVMAAPVTYSVDGEQYV 533 (689)
T ss_dssp EEEEECSSCCCSCCEEEEETTEEEE
T ss_pred ceeeeCCCCcccCceEEEECCEEEE
Confidence 99887554333 5577877776443
No 231
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.23 E-value=1.2e-09 Score=95.22 Aligned_cols=251 Identities=9% Similarity=-0.043 Sum_probs=154.4
Q ss_pred cEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEec----------CCCeEEEEECCCCceeeeeecc-------C
Q 019006 80 DIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISAS----------PDKTLRAWDVETGKQIKKMAEH-------N 142 (347)
Q Consensus 80 ~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~----------~dg~i~iwd~~~~~~~~~~~~~-------~ 142 (347)
+|.++|.... +....+..-..+ .+.++||+++++.+. .++.|.+||..+++.+.++... .
T Consensus 47 ~vsvID~~t~-~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g 123 (368)
T 1mda_H 47 ENWVSCAGCG-VTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVG 123 (368)
T ss_dssp EEEEEETTTT-EEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBS
T ss_pred eEEEEECCCC-eEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccC
Confidence 7888887543 444444433344 799999999988875 3688999999999998887543 1
Q ss_pred cceeEeecCCCCCCEEEEEcC-CCceEE--EeCCCCCceeecCCCCceEEEEEcCCCC-eEEEEecCCcEEEEeCCC---
Q 019006 143 SFVNSCCPSRRGPPLVVSGSD-DGTAKL--WDMRQRGAIQTFPDKYQITAVSFSDASD-KIYTGGIDNDVKVWDLRK--- 215 (347)
Q Consensus 143 ~~v~~~~~~~~~~~~~~s~~~-d~~i~i--wd~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~iwd~~~--- 215 (347)
.....+.+++++..++++-.. +..+.+ +|..+ +..++.... ..+.|++. .+++.+.||.+.+.|+.+
T Consensus 124 ~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~~---~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~ 197 (368)
T 1mda_H 124 PRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSASC---FHIHPGAAATHYLGSCPASLAASDLAAAPA 197 (368)
T ss_dssp CCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECSSC---CCCEEEETTEEECCCCTTSCEEEECCSSCC
T ss_pred CCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECCCc---eEEccCCCeEEEEEcCCCCEEEEECccccc
Confidence 223346677777766655433 467888 89876 333322111 11233433 445566788888888876
Q ss_pred --CceEEE----ecCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEecc------ccccccceEEEE
Q 019006 216 --GEVSMT----LQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGH------QHNFEKNLLKCG 283 (347)
Q Consensus 216 --~~~~~~----~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~ 283 (347)
++.... +.-...+. . .+++..++..+. +.+.+.|+.... ......+... ..........++
T Consensus 198 ~~~~v~~~~t~~i~vg~~P~---~-~~~~~~~~~vs~-~~V~viD~~~~~--~~v~~~~~~~~~~~~~~~~~p~g~~~v~ 270 (368)
T 1mda_H 198 AAGIVGAQCTGAQNCSSQAA---Q-ANYPGMLVWAVA-SSILQGDIPAAG--ATMKAAIDGNESGRKADNFRSAGFQMVA 270 (368)
T ss_dssp CCEECCCCSCTTSCBCSCCE---E-ETTTTEEEECBS-SCCEEEECCSSC--CEEECCCCSSCTHHHHTTEEECSSSCEE
T ss_pred cCCeEEEEeeeeeeCCCCcc---c-cccCCEEEEEcC-CEEEEEECCCCc--ceEEEEEEeccccccccccccCcceeeE
Confidence 332211 11112222 3 455565555555 899999985321 1111111100 000001111157
Q ss_pred ECCCCCEEEEeeC---------CCeEEEEeCCCceeeEEecCCccCeeeEEEcCCCC-EEEEec-CCCcEEeecC
Q 019006 284 WSPDGSKVTAGSS---------DRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEP-VIGSCS-SDKQIYLGEI 347 (347)
Q Consensus 284 ~s~~g~~l~sgs~---------dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~s-~D~~i~i~~~ 347 (347)
++||++.|+.+.. ++.+.++|+.+++.+.+++... ....++|+|+++ ++++.. .+++|.+.|+
T Consensus 271 ~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~VsVID~ 344 (368)
T 1mda_H 271 KLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH-DSDAIIAAQDGASDNYANSAGTEVLDIYDA 344 (368)
T ss_dssp EETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEES
T ss_pred EcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCC-CcceEEECCCCCEEEEEccCCCCeEEEEEC
Confidence 8999998887543 2356699999999998887544 689999999997 667777 6999999874
No 232
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.22 E-value=5.5e-12 Score=110.92 Aligned_cols=183 Identities=13% Similarity=0.144 Sum_probs=101.3
Q ss_pred CCCeEEEeeCCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEECCCCceeeeeeccCcceeE
Q 019006 68 AGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNS 147 (347)
Q Consensus 68 ~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~ 147 (347)
++..+++++.|+.|+.||.... +....+.. ..+.+..+..++..+++++.||.++.||..+++.+..+..+......
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG-~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~ 84 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTG-SIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQ 84 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTC-CEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHT
T ss_pred eCCEEEEEcCCCEEEEEECCCC-CEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccc
Confidence 5788999999999999997533 33334444 44555555667778888899999999999888876555332111111
Q ss_pred eecCCCCCCEEEEEcCCCceEEEeCCCCCceeecCCCCceEEEEEcCCCCeEEEEecCCcEEEEeCCCCceEEEecCCCC
Q 019006 148 CCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQD 227 (347)
Q Consensus 148 ~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~ 227 (347)
..+.......+++++.++.+..||.++++.+..+.... ...++|+++.+++++.++.|+.||.++++....+..+.
T Consensus 85 ~sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~---~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~- 160 (369)
T 2hz6_A 85 ASPCRSSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF---ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYFD- 160 (369)
T ss_dssp TCSCC-----CCCCEEEEEEEEECCC-------------------------EEEEEEEEEEECCCSSSSSCCCEEEEEE-
T ss_pred cCceEecCCEEEEEeCCCEEEEEECCCCcEEEEecCCC---cccccccCCEEEEEecCCEEEEEECCCCCEEEeEeccc-
Confidence 11111122356778889999999999888776665432 23445678899999999999999999998765543221
Q ss_pred ceeEEEECCCC---CEEEEEcCCCcEEEEeCCCC
Q 019006 228 MITGMSLSPDG---SYLLTNGMDCKLCIWDMRPY 258 (347)
Q Consensus 228 ~i~~v~~~~~~---~~l~t~~~d~~i~~wd~~~~ 258 (347)
.....+.++. ..+++++.||.+..||.++.
T Consensus 161 -~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG 193 (369)
T 2hz6_A 161 -YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESG 193 (369)
T ss_dssp -ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTC
T ss_pred -ccCccccCCccccceEEEECCCCEEEEEECCCC
Confidence 1223344332 56777888999999998754
No 233
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.20 E-value=5.3e-09 Score=99.08 Aligned_cols=254 Identities=14% Similarity=0.099 Sum_probs=157.0
Q ss_pred CCeEEEeeCCCcEEEEeccCCCeeeEEEeCc-c----cceeE-EEEcCCCCEEEEecC------CCeEEEEECCCCceee
Q 019006 69 GTVIASGSHDRDIFLWHVHGDCKNFMVLKGH-K----NAILD-LHWTTDGSQIISASP------DKTLRAWDVETGKQIK 136 (347)
Q Consensus 69 ~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h-~----~~v~~-~~~~~~~~~l~s~~~------dg~i~iwd~~~~~~~~ 136 (347)
+..++.++.|+.|+.+|.... +.......+ . ..+.+ ... .+..++.++. ++.|+.+|..+|+.+.
T Consensus 128 ~~~v~v~~~dg~l~alD~~tG-~~~W~~~~~~~~~~~~~~~~~p~v--~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W 204 (677)
T 1kb0_A 128 KGKVYVGAWDGRLIALDAATG-KEVWHQNTFEGQKGSLTITGAPRV--FKGKVIIGNGGAEYGVRGYITAYDAETGERKW 204 (677)
T ss_dssp TTEEEEECTTSEEEEEETTTC-CEEEEEETTTTCCSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEE
T ss_pred CCEEEEEcCCCEEEEEECCCC-CEEeeecCCcCcCcCcccccCcEE--ECCEEEEEecccccCCCCEEEEEECCCCcEEE
Confidence 467888888999999998533 333333332 1 11111 011 2345555543 7999999999999887
Q ss_pred eeeccCcce--------------------------------eEeecCCCCCCEEEEEcCCC-------------------
Q 019006 137 KMAEHNSFV--------------------------------NSCCPSRRGPPLVVSGSDDG------------------- 165 (347)
Q Consensus 137 ~~~~~~~~v--------------------------------~~~~~~~~~~~~~~s~~~d~------------------- 165 (347)
++....... ....+.+.. .+++.++.++
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~-~~vy~~~~~~~~w~~~~~~~~~gd~~~~~ 283 (677)
T 1kb0_A 205 RWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAEL-NTMYVGTGNGSPWSHKVRSPKGGDNLYLA 283 (677)
T ss_dssp EEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTT-TEEEEECCCEESSCHHHHSTTCCCCTTTT
T ss_pred EeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCC-CEEEEECCCCccccCCCCCccCCCCeeeE
Confidence 765422110 011222333 4566666553
Q ss_pred ceEEEeCCCCCceeecCC---C-------CceEEEEEcCCC---CeEEEEecCCcEEEEeCCCCceEEEecCCC------
Q 019006 166 TAKLWDMRQRGAIQTFPD---K-------YQITAVSFSDAS---DKIYTGGIDNDVKVWDLRKGEVSMTLQGHQ------ 226 (347)
Q Consensus 166 ~i~iwd~~~~~~~~~~~~---~-------~~v~~~~~~~~~---~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~------ 226 (347)
.|..+|.++++.+..++. . .....+....++ ..++.++.+|.++++|.++++.+..+....
T Consensus 284 sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~ 363 (677)
T 1kb0_A 284 SIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASG 363 (677)
T ss_dssp EEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEE
T ss_pred EEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccc
Confidence 488999999887765432 1 122223333356 578899999999999999998876554211
Q ss_pred -----Cce------------------------eEEEECCCCCEEEEEcCC------------------------------
Q 019006 227 -----DMI------------------------TGMSLSPDGSYLLTNGMD------------------------------ 247 (347)
Q Consensus 227 -----~~i------------------------~~v~~~~~~~~l~t~~~d------------------------------ 247 (347)
..+ ..++++|++..+++...+
T Consensus 364 ~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g 443 (677)
T 1kb0_A 364 YDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTA 443 (677)
T ss_dssp ECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCC
T ss_pred cCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccc
Confidence 001 157888988888775432
Q ss_pred -------------CcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCCceeeEEe
Q 019006 248 -------------CKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKL 314 (347)
Q Consensus 248 -------------~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~~~~ 314 (347)
+.|..||+.+.+ .+-..+.. .......+..++.+++.|+.||.+++||..+++++.++
T Consensus 444 ~~~~~~~~~~~~~g~l~A~D~~tG~----~~W~~~~~-----~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~ 514 (677)
T 1kb0_A 444 KFFNAEPPKSKPFGRLLAWDPVAQK----AAWSVEHV-----SPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEA 514 (677)
T ss_dssp EEECSSCCCSCCEEEEEEEETTTTE----EEEEEEES-----SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred cccccccCCCCCccEEEEEeCCCCc----EEeecCCC-----CCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeee
Confidence 678888876432 22222211 12233345677889999999999999999999999888
Q ss_pred cCCc-cCeeeEEEcCCCCEEEE
Q 019006 315 PGHT-GSVNESVFHATEPVIGS 335 (347)
Q Consensus 315 ~~h~-~~v~~~~~~~~~~~l~s 335 (347)
.-.. ..-.-+.|..+++.++.
T Consensus 515 ~~~~~~~~~p~~y~~~G~~~v~ 536 (677)
T 1kb0_A 515 PTGTGVVAAPSTYMVDGRQYVS 536 (677)
T ss_dssp ECSSCCCSCCEEEEETTEEEEE
T ss_pred eCCCCcccCCEEEEeCCEEEEE
Confidence 6443 33356667777764443
No 234
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.19 E-value=3.1e-08 Score=87.17 Aligned_cols=224 Identities=13% Similarity=0.105 Sum_probs=142.9
Q ss_pred CCCCEEEE-ecCCCeEEEEECCCC----ceeeeee------c-cCcceeEeecCCCCCCEEEEEcCC------CceEEEe
Q 019006 110 TDGSQIIS-ASPDKTLRAWDVETG----KQIKKMA------E-HNSFVNSCCPSRRGPPLVVSGSDD------GTAKLWD 171 (347)
Q Consensus 110 ~~~~~l~s-~~~dg~i~iwd~~~~----~~~~~~~------~-~~~~v~~~~~~~~~~~~~~s~~~d------~~i~iwd 171 (347)
+++++|+. +..++.|.++|+.+. +..+.+. . ....-..+...+++ +++++..+ +.+.++|
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG--i~Vs~~g~~~g~~~g~v~vlD 170 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA--IYISALGNEEGEGPGGILMLD 170 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC--EEEEEEEETTSCSCCEEEEEC
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe--EEEEcCCCcCCCCCCeEEEEE
Confidence 77777664 557789999999755 3444441 0 11122223344554 66665554 7899999
Q ss_pred CCCCCceeecCCC----CceEEEEEcCCCCeEEEEe-------------------cCCcEEEEeCCCCceEEEecCC-C-
Q 019006 172 MRQRGAIQTFPDK----YQITAVSFSDASDKIYTGG-------------------IDNDVKVWDLRKGEVSMTLQGH-Q- 226 (347)
Q Consensus 172 ~~~~~~~~~~~~~----~~v~~~~~~~~~~~l~~~~-------------------~dg~i~iwd~~~~~~~~~~~~~-~- 226 (347)
..+.+.+...+.. .--..+.|+|+++.+++.. ..++|.+||+.+++...++..- .
T Consensus 171 ~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g 250 (462)
T 2ece_A 171 HYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEEN 250 (462)
T ss_dssp TTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTE
T ss_pred CCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCC
Confidence 9998888777532 1234577899999888874 3678999999988777766542 1
Q ss_pred CceeEEEE--CCCCCEEEEEc------CCCcEEEEeCCCCCCcCceeEEE--eccc--ccc----------ccceEEEEE
Q 019006 227 DMITGMSL--SPDGSYLLTNG------MDCKLCIWDMRPYAPQNRCVKIL--EGHQ--HNF----------EKNLLKCGW 284 (347)
Q Consensus 227 ~~i~~v~~--~~~~~~l~t~~------~d~~i~~wd~~~~~~~~~~~~~~--~~~~--~~~----------~~~~~~~~~ 284 (347)
.....+.| +|++++++++. .+++|.+|..... .....+.+ .... ..+ ......+.+
T Consensus 251 ~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g--~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~l 328 (462)
T 2ece_A 251 RMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDG--KWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDI 328 (462)
T ss_dssp EEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETT--EEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEE
T ss_pred CccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCC--ceeEEEEEeCCCccccccccccccccccCCCceeEEEE
Confidence 22345555 99999888776 4568877665421 11111111 1100 000 123567789
Q ss_pred CCCCCEEEEeeC-CCeEEEEeCC---CceeeEEecCCc--------------cCeeeEEEcCCCCEEEEec
Q 019006 285 SPDGSKVTAGSS-DRMVYIWDTT---SRRILYKLPGHT--------------GSVNESVFHATEPVIGSCS 337 (347)
Q Consensus 285 s~~g~~l~sgs~-dg~i~vwd~~---~~~~~~~~~~h~--------------~~v~~~~~~~~~~~l~s~s 337 (347)
||||++|.++.. .+.|.+||+. +.+++.++.-.. +....++++|++++|..+.
T Consensus 329 S~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 329 SLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp CTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred CCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 999999987664 6799999975 235555554321 1368899999999887766
No 235
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.13 E-value=3.1e-08 Score=85.18 Aligned_cols=261 Identities=14% Similarity=0.143 Sum_probs=157.8
Q ss_pred cccEEEEEECCCCCeEEEeeCCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEECCCCceee
Q 019006 57 QSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIK 136 (347)
Q Consensus 57 ~~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~ 136 (347)
...+.++...++|.+. .++.+ ++.++..+. .................. +..|..++.++.+..+|.. ++...
T Consensus 59 ~~~~~~~~~~~~g~l~-v~t~~--l~~~d~~g~--~~~~~~~~~~~~~~~~~~--~~~l~v~t~~~~l~~~d~~-g~~~~ 130 (330)
T 3hxj_A 59 EIIECRPSIGKDGTIY-FGSDK--VYAINPDGT--EKWRFDTKKAIVSDFTIF--EDILYVTSMDGHLYAINTD-GTEKW 130 (330)
T ss_dssp GEEEECCEETTTTEEC-CSSCE--EEEECCCGG--GGGGSCC-----CCEEEE--TTEEEEECTTSEEEEECTT-SCEEE
T ss_pred CCcccceEEecCCcEE-EecCc--EEEECCCCc--EEEEEECCCCcccCceEE--CCEEEEEecCCEEEEEcCC-CCEEE
Confidence 3445667776666544 44444 777775322 111111111112222222 4567778889999999988 76665
Q ss_pred eeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeecCC-CCceEEEEEcCCCCeEEEEecCCcEEEEeCCC
Q 019006 137 KMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPD-KYQITAVSFSDASDKIYTGGIDNDVKVWDLRK 215 (347)
Q Consensus 137 ~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 215 (347)
........+......+.+ .+..++.++.+..+|.. +.....+.. ...+.++..++++. ++.++ +.|..+| .+
T Consensus 131 ~~~~~~~~~~~~~~~~~g--~l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~-l~v~t--~~l~~~d-~~ 203 (330)
T 3hxj_A 131 RFKTKKAIYATPIVSEDG--TIYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGT-IYFGS--DKVYAIN-PD 203 (330)
T ss_dssp EEECSSCCCSCCEECTTS--CEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCC-EEEES--SSEEEEC-TT
T ss_pred EEcCCCceeeeeEEcCCC--EEEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCE-EEEEe--CEEEEEC-CC
Confidence 555444433333333332 35667888999999988 655544432 23455566666655 55555 8899999 77
Q ss_pred CceEEEecCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEEEEee
Q 019006 216 GEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGS 295 (347)
Q Consensus 216 ~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs 295 (347)
++...........+.++...+++. +..++.++.+..+|.. ......+.... .....+...+++ .|..++
T Consensus 204 g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~~~-----g~~~~~~~~~~----~~~~~~~~~~~g-~l~v~t 272 (330)
T 3hxj_A 204 GTEKWNFYAGYWTVTRPAISEDGT-IYVTSLDGHLYAINPD-----GTEKWRFKTGK----RIESSPVIGNTD-TIYFGS 272 (330)
T ss_dssp SCEEEEECCSSCCCSCCEECTTSC-EEEEETTTEEEEECTT-----SCEEEEEECSS----CCCSCCEECTTS-CEEEEC
T ss_pred CcEEEEEccCCcceeceEECCCCe-EEEEcCCCeEEEECCC-----CCEeEEeeCCC----CccccceEcCCC-eEEEec
Confidence 777776665556688888888776 4455667778888742 12222222211 111223344455 566788
Q ss_pred CCCeEEEEeCCCceeeEEecCCccCeeeEEEcCCCCEEEEecCCCcEEee
Q 019006 296 SDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLG 345 (347)
Q Consensus 296 ~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~i~ 345 (347)
.+|.|+.+|. +++.+..+......+..+...+++.+. .++.+|.+++.
T Consensus 273 ~~ggl~~~d~-~g~~~~~~~~~~~~~~~~~~d~~g~l~-~gt~~G~~~~~ 320 (330)
T 3hxj_A 273 YDGHLYAINP-DGTEKWNFETGSWIIATPVIDENGTIY-FGTRNGKFYAL 320 (330)
T ss_dssp TTCEEEEECT-TSCEEEEEECSSCCCSCCEECTTCCEE-EECTTSCEEEE
T ss_pred CCCCEEEECC-CCcEEEEEEcCCccccceEEcCCCEEE-EEcCCCeEEEE
Confidence 8889999996 677777666556667788887887655 57788888764
No 236
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.07 E-value=1.7e-07 Score=82.60 Aligned_cols=226 Identities=13% Similarity=0.145 Sum_probs=141.7
Q ss_pred CCCCeE-EEeeCCCcEEEEeccCCC---eeeEEEe------C-cccceeEEEEcCCCCEEEEecCC------CeEEEEEC
Q 019006 67 PAGTVI-ASGSHDRDIFLWHVHGDC---KNFMVLK------G-HKNAILDLHWTTDGSQIISASPD------KTLRAWDV 129 (347)
Q Consensus 67 ~~~~~l-~s~~~d~~v~~w~~~~~~---~~~~~~~------~-h~~~v~~~~~~~~~~~l~s~~~d------g~i~iwd~ 129 (347)
+++++| +++..++.|+++|...+. +....+. . -...-..+..+|+| .++++..+ |.+.+.|.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~ 171 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH 171 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence 777765 456678899999985332 2223331 0 11134566788999 77776555 78999999
Q ss_pred CCCceeeeeeccCc---ceeEeecCCCCCCEEEEEc-------------------CCCceEEEeCCCCCceeecCCC---
Q 019006 130 ETGKQIKKMAEHNS---FVNSCCPSRRGPPLVVSGS-------------------DDGTAKLWDMRQRGAIQTFPDK--- 184 (347)
Q Consensus 130 ~~~~~~~~~~~~~~---~v~~~~~~~~~~~~~~s~~-------------------~d~~i~iwd~~~~~~~~~~~~~--- 184 (347)
.+++.+.++..... ....+.+.+..+ .+++.. .+.+|.+||+.+++.++++...
T Consensus 172 ~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~-~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g 250 (462)
T 2ece_A 172 YSFEPLGKWEIDRGDQYLAYDFWWNLPNE-VLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEEN 250 (462)
T ss_dssp TTCCEEEECCSBCTTCCCCCCEEEETTTT-EEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTE
T ss_pred CCCeEEEEEccCCCCccccceEEECCCCC-EEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCC
Confidence 99988887753322 233355555554 555553 4789999999988777776543
Q ss_pred CceEEEEE--cCCCCeEEEEec------CCcEEEEeCCCCceE--EE--ecCC----------------CCceeEEEECC
Q 019006 185 YQITAVSF--SDASDKIYTGGI------DNDVKVWDLRKGEVS--MT--LQGH----------------QDMITGMSLSP 236 (347)
Q Consensus 185 ~~v~~~~~--~~~~~~l~~~~~------dg~i~iwd~~~~~~~--~~--~~~~----------------~~~i~~v~~~~ 236 (347)
.....+.| +|+++++++++. +++|.+|....++.. .. +... ......|.+++
T Consensus 251 ~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~ 330 (462)
T 2ece_A 251 RMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISL 330 (462)
T ss_dssp EEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECT
T ss_pred CccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECC
Confidence 23444555 999999888774 557877655443211 11 1110 13467899999
Q ss_pred CCCEEEEEcC-CCcEEEEeCCCCCCcCceeEEEeccc----------cccccceEEEEECCCCCEEEEee
Q 019006 237 DGSYLLTNGM-DCKLCIWDMRPYAPQNRCVKILEGHQ----------HNFEKNLLKCGWSPDGSKVTAGS 295 (347)
Q Consensus 237 ~~~~l~t~~~-d~~i~~wd~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~s~~g~~l~sgs 295 (347)
||++|.++.. .+.|.+||+.... ..+.+..+.... .........+.++|||++|+++.
T Consensus 331 DGrfLYVSnrg~d~VavfdV~d~~-~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 331 DDKFLYLSLWGIGEVRQYDISNPF-KPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp TSCEEEEEETTTTEEEEEECSSTT-SCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred CCCEEEEEeCCCCEEEEEEecCCC-CcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 9999887764 5799999986322 223333332210 00111245677999999999887
No 237
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.06 E-value=4.6e-08 Score=80.84 Aligned_cols=197 Identities=9% Similarity=0.018 Sum_probs=134.9
Q ss_pred eeEEEEcCCCCEEEEecC--CCeEEEEECCCCceeeeeeccC-cceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCcee
Q 019006 103 ILDLHWTTDGSQIISASP--DKTLRAWDVETGKQIKKMAEHN-SFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQ 179 (347)
Q Consensus 103 v~~~~~~~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~ 179 (347)
...+.|++++...++.+. ++.|++.|+.+++.+..+.... .+...+... +..+.++.-.++.+.++|..+.+.+.
T Consensus 23 ~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~v~~ 100 (266)
T 2iwa_A 23 TQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLSNIK 100 (266)
T ss_dssp EEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTTTEEEE
T ss_pred cccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECCCCcEEE
Confidence 578999998755555443 5799999999999887765322 222233333 34567777788999999999888887
Q ss_pred ecCCC-CceEEEEEcCCCCeEEEEecCCcEEEEeCCCCceEEEecCCC-----CceeEEEECCCCCEEEEEcCCCcEEEE
Q 019006 180 TFPDK-YQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQ-----DMITGMSLSPDGSYLLTNGMDCKLCIW 253 (347)
Q Consensus 180 ~~~~~-~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-----~~i~~v~~~~~~~~l~t~~~d~~i~~w 253 (347)
.++.. .. ...++++++.++++..++.|.++|..+.+....+.--. ..++.+.|. ++...+....++.|.+.
T Consensus 101 ~i~~g~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vI 177 (266)
T 2iwa_A 101 NFTHQMKD--GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIARI 177 (266)
T ss_dssp EEECCSSS--CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEE
T ss_pred EEECCCCC--eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeEEEE
Confidence 77543 22 23355577888877778899999999888777665321 236788887 67555555567899999
Q ss_pred eCCCCCCcCceeEEEeccc---------cccccceEEEEECCCCCEE-EEeeCCCeEEEEeCCCc
Q 019006 254 DMRPYAPQNRCVKILEGHQ---------HNFEKNLLKCGWSPDGSKV-TAGSSDRMVYIWDTTSR 308 (347)
Q Consensus 254 d~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~s~~g~~l-~sgs~dg~i~vwd~~~~ 308 (347)
|.... +.+..+.... .........++|+|+++.| +++...+.+++.++...
T Consensus 178 D~~tg----~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 178 SAKDG----TLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp ETTTC----CEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred ECCCC----cEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 98753 3444443210 0011356889999998755 55667889999987654
No 238
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.06 E-value=8.7e-09 Score=88.65 Aligned_cols=255 Identities=16% Similarity=0.140 Sum_probs=149.1
Q ss_pred EECCCCCeEEEeeCCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEECCCCceeeeeeccCc
Q 019006 64 KFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNS 143 (347)
Q Consensus 64 ~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 143 (347)
.+..++ .|..++.++.|+.|+ ... +.......+...+.++...+++. |..++.+ +..+|. +++.+..+.....
T Consensus 26 ~~d~~g-~l~v~t~~~~l~~~d-~~g-~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~--l~~~d~-~g~~~~~~~~~~~ 98 (330)
T 3hxj_A 26 ILAKNG-TIYLGSSNKNLYAIN-TDG-SVKWFFKSGEIIECRPSIGKDGT-IYFGSDK--VYAINP-DGTEKWRFDTKKA 98 (330)
T ss_dssp EECTTS-CEECSSTTTTTEEEC-TTS-CEEESSCGGGEEEECCEETTTTE-ECCSSCE--EEEECC-CGGGGGGSCC---
T ss_pred eEccCC-eEEEEcCCCEEEEEC-CCC-cEEEEEecCCCcccceEEecCCc-EEEecCc--EEEECC-CCcEEEEEECCCC
Confidence 333444 455677788888888 322 22222222333456666666664 5555554 888885 5554443332222
Q ss_pred ceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeecCC-CCceEEEEEcCCCCeEEEEecCCcEEEEeCCCCceEEEe
Q 019006 144 FVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPD-KYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTL 222 (347)
Q Consensus 144 ~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 222 (347)
........ ...+..++.++.+..+|.. +........ ...+.++...+++ .++.++.++.|..||.. ++....+
T Consensus 99 ~~~~~~~~---~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g-~l~vgt~~~~l~~~d~~-g~~~~~~ 172 (330)
T 3hxj_A 99 IVSDFTIF---EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDG-TIYVGSNDNYLYAINPD-GTEKWRF 172 (330)
T ss_dssp --CCEEEE---TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTS-CEEEECTTSEEEEECTT-SCEEEEE
T ss_pred cccCceEE---CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCC-EEEEEcCCCEEEEECCC-CCEeEEE
Confidence 11111111 2456778888999999987 555444332 2234555566555 47778888999999998 7776666
Q ss_pred cCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEEEEeeCCCeEEE
Q 019006 223 QGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYI 302 (347)
Q Consensus 223 ~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~v 302 (347)
......+.++.+.+++...+.. +.+..+| ... ......... ...+.++...++|. |..++.++.|+.
T Consensus 173 ~~~~~~~~~~~~d~~g~l~v~t---~~l~~~d-~~g----~~~~~~~~~----~~~~~~~~~~~~g~-l~v~t~~~gl~~ 239 (330)
T 3hxj_A 173 KTNDAITSAASIGKDGTIYFGS---DKVYAIN-PDG----TEKWNFYAG----YWTVTRPAISEDGT-IYVTSLDGHLYA 239 (330)
T ss_dssp ECSSCCCSCCEECTTCCEEEES---SSEEEEC-TTS----CEEEEECCS----SCCCSCCEECTTSC-EEEEETTTEEEE
T ss_pred ecCCCceeeeEEcCCCEEEEEe---CEEEEEC-CCC----cEEEEEccC----CcceeceEECCCCe-EEEEcCCCeEEE
Confidence 6555667778887777755544 7889998 322 222222211 12345556677775 555667788999
Q ss_pred EeCCCceeeEEecCCccCeeeEEEcCCCCEEEEecCCCcEEeec
Q 019006 303 WDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGE 346 (347)
Q Consensus 303 wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~i~~ 346 (347)
+|. +++.+..+......+..+.+.+++. |..++.+|.|+.+|
T Consensus 240 ~~~-~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~ggl~~~d 281 (330)
T 3hxj_A 240 INP-DGTEKWRFKTGKRIESSPVIGNTDT-IYFGSYDGHLYAIN 281 (330)
T ss_dssp ECT-TSCEEEEEECSSCCCSCCEECTTSC-EEEECTTCEEEEEC
T ss_pred ECC-CCCEeEEeeCCCCccccceEcCCCe-EEEecCCCCEEEEC
Confidence 984 5666666665555555666665664 44555666666554
No 239
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.99 E-value=6.6e-08 Score=88.04 Aligned_cols=240 Identities=12% Similarity=0.114 Sum_probs=146.6
Q ss_pred CCCCeEEEeeCC-CcEEEEeccCCCeeeEEEe-CcccceeEEEE-c-CCCCEEEEec------------------CCCeE
Q 019006 67 PAGTVIASGSHD-RDIFLWHVHGDCKNFMVLK-GHKNAILDLHW-T-TDGSQIISAS------------------PDKTL 124 (347)
Q Consensus 67 ~~~~~l~s~~~d-~~v~~w~~~~~~~~~~~~~-~h~~~v~~~~~-~-~~~~~l~s~~------------------~dg~i 124 (347)
+||++|.....+ ..|.+.|+... +....+. ........+++ + |++++++.++ .++.+
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~t~-~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~v 177 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCDVM-KCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVF 177 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTT-EEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEE
T ss_pred cCCCEEEEEcCCCCEEEEEECCCc-eEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceE
Confidence 478877776654 45888888642 3223222 12245778887 5 8999998884 34579
Q ss_pred EEEECCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCC-------------------------------------Cce
Q 019006 125 RAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDD-------------------------------------GTA 167 (347)
Q Consensus 125 ~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d-------------------------------------~~i 167 (347)
.+.|.++.+...++..... ...+..++++...+++...+ +.+
T Consensus 178 tvID~~t~~v~~qI~Vgg~-pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V 256 (595)
T 1fwx_A 178 TAVDADKWEVAWQVLVSGN-LDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGV 256 (595)
T ss_dssp EEEETTTTEEEEEEEESSC-CCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTE
T ss_pred EEEECCCCeEEEEEEeCCC-ccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcE
Confidence 9999998877776654222 22234444444333333222 246
Q ss_pred EEEeCCC--CCc-eeecCCCCceEEEEEcCCCCeEEEEe-cCCcEEEEeCCCCc------------eEEEecCCCCceeE
Q 019006 168 KLWDMRQ--RGA-IQTFPDKYQITAVSFSDASDKIYTGG-IDNDVKVWDLRKGE------------VSMTLQGHQDMITG 231 (347)
Q Consensus 168 ~iwd~~~--~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~------------~~~~~~~~~~~i~~ 231 (347)
.+.|.++ +.. +..++......++.++||++++++++ .+++|.++|+.+.+ ...+...- .....
T Consensus 257 ~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG-~gP~h 335 (595)
T 1fwx_A 257 KVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELG-LGPLH 335 (595)
T ss_dssp EEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCC-SCEEE
T ss_pred EEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCC-CCcce
Confidence 7777776 434 44554444567799999999887665 67899999998653 22333322 33678
Q ss_pred EEECCCCCEEEEEcCCCcEEEEeCCCC------CCcCceeEEEecccc-ccccceEEEEECCCCCEEEEee---CCCeE-
Q 019006 232 MSLSPDGSYLLTNGMDCKLCIWDMRPY------APQNRCVKILEGHQH-NFEKNLLKCGWSPDGSKVTAGS---SDRMV- 300 (347)
Q Consensus 232 v~~~~~~~~l~t~~~d~~i~~wd~~~~------~~~~~~~~~~~~~~~-~~~~~~~~~~~s~~g~~l~sgs---~dg~i- 300 (347)
++|+|+|....+.-.|+.|..||+... +.....+..+..+-. .+...-....++|||++|+++. .|+.+
T Consensus 336 ~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~skdr~~~ 415 (595)
T 1fwx_A 336 TAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKFSKDRFLN 415 (595)
T ss_dssp EEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESCCTTSSCC
T ss_pred EEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCCCCcccccc
Confidence 999999955556778999999998641 111334455544321 0000001123589999999864 35432
Q ss_pred ---------EEEeCCCce
Q 019006 301 ---------YIWDTTSRR 309 (347)
Q Consensus 301 ---------~vwd~~~~~ 309 (347)
.++|...++
T Consensus 416 ~gp~~~~~~ql~dis~~~ 433 (595)
T 1fwx_A 416 VGPLKPENDQLIDISGDK 433 (595)
T ss_dssp CCSSCCEEEEEEECSSSS
T ss_pred CCCCCCCcceEEEcCCCc
Confidence 788885544
No 240
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.98 E-value=1.4e-07 Score=77.95 Aligned_cols=193 Identities=10% Similarity=0.039 Sum_probs=126.3
Q ss_pred ceeEeecCCCCCCEEEEEcC--CCceEEEeCCCCCceeecCCCC--ceEEEEEcCCCCeEEEEe-cCCcEEEEeCCCCce
Q 019006 144 FVNSCCPSRRGPPLVVSGSD--DGTAKLWDMRQRGAIQTFPDKY--QITAVSFSDASDKIYTGG-IDNDVKVWDLRKGEV 218 (347)
Q Consensus 144 ~v~~~~~~~~~~~~~~s~~~--d~~i~iwd~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~ 218 (347)
+...+.+.++ ..++++.+. ++.|.++|+.+++.+..++... ....+++. ++.++.+. .++.+.++|..+.+.
T Consensus 22 f~~Gl~~~~d-g~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~v 98 (266)
T 2iwa_A 22 FTQGLVYAEN-DTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLSN 98 (266)
T ss_dssp CEEEEEECST-TEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTTTEE
T ss_pred CcccEEEeCC-CeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECCCCcE
Confidence 3455666655 345555443 6799999999999887764322 22344444 55666555 578999999999988
Q ss_pred EEEecCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEecccc-ccccceEEEEECCCCCEEEEeeCC
Q 019006 219 SMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQH-NFEKNLLKCGWSPDGSKVTAGSSD 297 (347)
Q Consensus 219 ~~~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~s~~g~~l~sgs~d 297 (347)
..++..-.. ....++++++.++++..++.|.++|....+ ....+.-... .....+..+.|. +|...+....+
T Consensus 99 ~~~i~~g~~--~g~glt~Dg~~l~vs~gs~~l~viD~~t~~----v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~ 171 (266)
T 2iwa_A 99 IKNFTHQMK--DGWGLATDGKILYGSDGTSILYEIDPHTFK----LIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQT 171 (266)
T ss_dssp EEEEECCSS--SCCEEEECSSSEEEECSSSEEEEECTTTCC----EEEEEECEETTEECCCEEEEEEE-TTEEEEEETTS
T ss_pred EEEEECCCC--CeEEEEECCCEEEEECCCCeEEEEECCCCc----EEEEEEECCCCcccccceeEEEE-CCEEEEecCCC
Confidence 887753211 223455678777777778899999987543 2222221110 011235566777 67555555568
Q ss_pred CeEEEEeCCCceeeEEecCCc-------------cCeeeEEEcCCCC-EEEEecCCCcEEeec
Q 019006 298 RMVYIWDTTSRRILYKLPGHT-------------GSVNESVFHATEP-VIGSCSSDKQIYLGE 346 (347)
Q Consensus 298 g~i~vwd~~~~~~~~~~~~h~-------------~~v~~~~~~~~~~-~l~s~s~D~~i~i~~ 346 (347)
+.|.+.|..+++.+.+++-.. ...+.++|+|+++ +++++...++++.-+
T Consensus 172 ~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~ 234 (266)
T 2iwa_A 172 DCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIK 234 (266)
T ss_dssp SEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEE
T ss_pred CeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEE
Confidence 899999999999988876321 2458999999975 666777777776544
No 241
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.96 E-value=1.3e-07 Score=77.24 Aligned_cols=185 Identities=15% Similarity=0.138 Sum_probs=121.1
Q ss_pred ceeEeecCCCCCCEEEEEcCCC--ceEEEeCCCCCceeecCCCCceEEEEEcCCCCeEEEEe-cCCcEEEEeCCCCceEE
Q 019006 144 FVNSCCPSRRGPPLVVSGSDDG--TAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIYTGG-IDNDVKVWDLRKGEVSM 220 (347)
Q Consensus 144 ~v~~~~~~~~~~~~~~s~~~d~--~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~ 220 (347)
+...+.+. . ..++.+.+.+| .|+.+|+++++.+...+.........+.++++.++... .++.+.+||..+.+...
T Consensus 44 ftqGL~~~-~-~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~ 121 (262)
T 3nol_A 44 FTEGFFYR-N-GYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVR 121 (262)
T ss_dssp EEEEEEEE-T-TEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEEE
T ss_pred ccceEEEE-C-CEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEEE
Confidence 34555555 2 35667776665 89999999999888776544443333333456676655 57899999999999888
Q ss_pred EecCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEeccccc-cccceEEEEECCCCCEEEEeeCCCe
Q 019006 221 TLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHN-FEKNLLKCGWSPDGSKVTAGSSDRM 299 (347)
Q Consensus 221 ~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~s~~g~~l~sgs~dg~ 299 (347)
++.... ....+++++..|+.+..++.|.++|..+++. ...+.-.... ....+..+.|. +|+..+..-.++.
T Consensus 122 ti~~~~---eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v----~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~ 193 (262)
T 3nol_A 122 SFNYDG---EGWGLTHNDQYLIMSDGTPVLRFLDPESLTP----VRTITVTAHGEELPELNELEWV-DGEIFANVWQTNK 193 (262)
T ss_dssp EEECSS---CCCCEEECSSCEEECCSSSEEEEECTTTCSE----EEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSE
T ss_pred EEECCC---CceEEecCCCEEEEECCCCeEEEEcCCCCeE----EEEEEeccCCccccccceeEEE-CCEEEEEEccCCe
Confidence 876432 2233445677777766678899999875432 2222221100 01233445665 6765555557889
Q ss_pred EEEEeCCCceeeEEecCC------------ccCeeeEEEcCCCCEEEEecC
Q 019006 300 VYIWDTTSRRILYKLPGH------------TGSVNESVFHATEPVIGSCSS 338 (347)
Q Consensus 300 i~vwd~~~~~~~~~~~~h------------~~~v~~~~~~~~~~~l~s~s~ 338 (347)
|.+.|..+++.+.++.-. ....+.+||+|+.+.|.-++.
T Consensus 194 I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 194 IVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp EEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred EEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 999999999998877532 124589999998876665554
No 242
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.95 E-value=3.4e-07 Score=86.66 Aligned_cols=273 Identities=16% Similarity=0.153 Sum_probs=163.5
Q ss_pred CCeEEEeeCCCcEEEEeccCCCeeeEEEeCccc----------ce-eEEEEcCCCCEEEEecCCCeEEEEECCCCceeee
Q 019006 69 GTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKN----------AI-LDLHWTTDGSQIISASPDKTLRAWDVETGKQIKK 137 (347)
Q Consensus 69 ~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~----------~v-~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 137 (347)
+..++.++.++.|+.+|.... +.......... .+ ..+.. .+..++.++.|+.+..+|..+|+.+.+
T Consensus 66 ~g~vyv~~~~~~v~AlD~~tG-~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W~ 142 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAASG-KELWRYDPEVAKVKARTSCCDAVNRGVAL--WGDKVYVGTLDGRLIALDAKTGKAIWS 142 (668)
T ss_dssp TTEEEEEEGGGEEEEEETTTC-CEEEEECCCCCGGGGGGCTTCSCCCCCEE--EBTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred CCEEEEECCCCeEEEEECCCC-hhceEECCCCCccccccccccCCccceEE--ECCEEEEEcCCCEEEEEECCCCCEeee
Confidence 556777777888888887432 22222222111 00 11122 256788888999999999999998877
Q ss_pred eeccCcc-eeEeecCC--CCCCEEEEEcC------CCceEEEeCCCCCceeecCC---CC--------------------
Q 019006 138 MAEHNSF-VNSCCPSR--RGPPLVVSGSD------DGTAKLWDMRQRGAIQTFPD---KY-------------------- 185 (347)
Q Consensus 138 ~~~~~~~-v~~~~~~~--~~~~~~~s~~~------d~~i~iwd~~~~~~~~~~~~---~~-------------------- 185 (347)
+...... .......+ .+ ..++.+.. ++.|..+|.++++.+..+.. ..
T Consensus 143 ~~~~~~~~~~~~~~~P~v~~-~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~ 221 (668)
T 1kv9_A 143 QQTTDPAKPYSITGAPRVVK-GKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQ 221 (668)
T ss_dssp EECSCTTSSCBCCSCCEEET-TEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSC
T ss_pred eccCCCCCcceecCCCEEEC-CEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccc
Confidence 6542110 00000000 12 24444432 58899999999887755421 00
Q ss_pred ---------ceEEEEEcCCCCeEEEEecCC-------------------cEEEEeCCCCceEEEecC--CC-------Cc
Q 019006 186 ---------QITAVSFSDASDKIYTGGIDN-------------------DVKVWDLRKGEVSMTLQG--HQ-------DM 228 (347)
Q Consensus 186 ---------~v~~~~~~~~~~~l~~~~~dg-------------------~i~iwd~~~~~~~~~~~~--~~-------~~ 228 (347)
....+++++..+.++.++.++ .|.-+|.++++....++. |. ..
T Consensus 222 ~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~ 301 (668)
T 1kv9_A 222 YWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQ 301 (668)
T ss_dssp HHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSC
T ss_pred eeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCC
Confidence 012467888888888887765 399999999998877764 21 11
Q ss_pred eeEEEECCCCC---EEEEEcCCCcEEEEeCCCCCCcCc-------eeEEEec--------ccccccc-------------
Q 019006 229 ITGMSLSPDGS---YLLTNGMDCKLCIWDMRPYAPQNR-------CVKILEG--------HQHNFEK------------- 277 (347)
Q Consensus 229 i~~v~~~~~~~---~l~t~~~d~~i~~wd~~~~~~~~~-------~~~~~~~--------~~~~~~~------------- 277 (347)
.....+..+|+ .++.++.+|.+.++|..+.+.... ....+.. ....+..
T Consensus 302 ~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~ 381 (668)
T 1kv9_A 302 ITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAH 381 (668)
T ss_dssp EEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSS
T ss_pred cEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCcccc
Confidence 22222223554 688899999999999875432200 0000000 0000000
Q ss_pred ceEEEEECCCCCEEEEe------------------------------------eCCCeEEEEeCCCceeeEEecCCccCe
Q 019006 278 NLLKCGWSPDGSKVTAG------------------------------------SSDRMVYIWDTTSRRILYKLPGHTGSV 321 (347)
Q Consensus 278 ~~~~~~~s~~g~~l~sg------------------------------------s~dg~i~vwd~~~~~~~~~~~~h~~~v 321 (347)
.-..++++|+..+++.. ..+|.|+.||+.+++.+.+.+.+. ..
T Consensus 382 ~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~-~~ 460 (668)
T 1kv9_A 382 NWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPT-HW 460 (668)
T ss_dssp CSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESS-SC
T ss_pred CCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCCC-CC
Confidence 00125677776665541 134889999999999998876433 34
Q ss_pred eeEEEcCCCCEEEEecCCCcEEeec
Q 019006 322 NESVFHATEPVIGSCSSDKQIYLGE 346 (347)
Q Consensus 322 ~~~~~~~~~~~l~s~s~D~~i~i~~ 346 (347)
....+...+.++..++.|+.++.+|
T Consensus 461 ~~~~~~t~gg~vf~g~~dg~l~a~d 485 (668)
T 1kv9_A 461 NGGTLSTAGNLVFQGTAAGQMHAYS 485 (668)
T ss_dssp CCCEEEETTTEEEEECTTSEEEEEE
T ss_pred cCceeEeCCCEEEEECCcccchhhh
Confidence 4445666777888899999999887
No 243
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.93 E-value=2e-06 Score=73.77 Aligned_cols=245 Identities=10% Similarity=0.060 Sum_probs=137.9
Q ss_pred ecCccccEEEEEECCCCCeEEEeeCCCcEEEEeccCCCeeeEEEeC------------------cccceeEEEEcC-CCC
Q 019006 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKG------------------HKNAILDLHWTT-DGS 113 (347)
Q Consensus 53 ~~~h~~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~------------------h~~~v~~~~~~~-~~~ 113 (347)
+.+.-....+++|.++|.++.++..++.|..|+..+.......... .......+++.+ +++
T Consensus 14 ~~g~~~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~ 93 (322)
T 2fp8_A 14 IEAPSYAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ 93 (322)
T ss_dssp EECSSSCCCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE
T ss_pred cCCccCCceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCc
Confidence 3343345667889999998888888999999987543221111110 013468899997 554
Q ss_pred EEEEecCCCeEEEEECCCCceeeeeec-----cCcceeEeecCC-CCCCEEEEEcC-----------------CCceEEE
Q 019006 114 QIISASPDKTLRAWDVETGKQIKKMAE-----HNSFVNSCCPSR-RGPPLVVSGSD-----------------DGTAKLW 170 (347)
Q Consensus 114 ~l~s~~~dg~i~iwd~~~~~~~~~~~~-----~~~~v~~~~~~~-~~~~~~~s~~~-----------------d~~i~iw 170 (347)
|+.+...+.+..+|..++.. ..+.. .......++..+ .+ .+.++-.. ++.+..+
T Consensus 94 -l~v~d~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G-~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~ 170 (322)
T 2fp8_A 94 -LYIVDCYYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTG-IVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKY 170 (322)
T ss_dssp -EEEEETTTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTC-CEEEEESCSSCCTTCHHHHHHHTCCCEEEEEE
T ss_pred -EEEEECCCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCC-EEEEECCcccccccccceehcccCCCceEEEE
Confidence 55454445588888765432 22211 112345566665 44 45554322 3567777
Q ss_pred eCCCCCceeecCCCCceEEEEEcCCCCeEEEE-ecCCcEEEEeCCCCc--eEEEecCCCCceeEEEECCCCCEEEEEcC-
Q 019006 171 DMRQRGAIQTFPDKYQITAVSFSDASDKIYTG-GIDNDVKVWDLRKGE--VSMTLQGHQDMITGMSLSPDGSYLLTNGM- 246 (347)
Q Consensus 171 d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~iwd~~~~~--~~~~~~~~~~~i~~v~~~~~~~~l~t~~~- 246 (347)
|..++..............++++++++.++.+ +..+.|..|++.... ....+..... ...+++.++|++.++...
T Consensus 171 d~~~~~~~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~~~ 249 (322)
T 2fp8_A 171 DPSTKETTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSSEE 249 (322)
T ss_dssp ETTTTEEEEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEEEE
T ss_pred eCCCCEEEEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEecCc
Confidence 77654432211111235678999999877655 566889999987421 1111111123 678999999987766544
Q ss_pred ---------CCcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCC
Q 019006 247 ---------DCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTS 307 (347)
Q Consensus 247 ---------d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~ 307 (347)
.+.|..+|.. ...+..+..........+..+++ .++.+.++....+.|.++++..
T Consensus 250 ~~~~~~~~~~~~v~~~d~~-----G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 250 LDGNMHGRVDPKGIKFDEF-----GNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYDK 313 (322)
T ss_dssp TTSSTTSCEEEEEEEECTT-----SCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC--
T ss_pred ccccccCCCccEEEEECCC-----CCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEeccc
Confidence 3567777643 33333343221110123444444 3565556666677888888753
No 244
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.90 E-value=3.1e-07 Score=75.07 Aligned_cols=182 Identities=13% Similarity=0.077 Sum_probs=124.3
Q ss_pred eeEEEEcCCCCEEEEecCCCeEEEEECCCCceeeeeeccCc-ceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeec
Q 019006 103 ILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNS-FVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTF 181 (347)
Q Consensus 103 v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~ 181 (347)
...+.|+ ++.+.++.+.+|.|+++|+++++.+..+ .... +...+.. .+..+.++.-.++.+.+||..+.+.+.++
T Consensus 57 tqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~--~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti 132 (268)
T 3nok_A 57 TQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLAS--DGERLYQLTWTEGLLFTWSGMPPQRERTT 132 (268)
T ss_dssp EEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEE--CSSCEEEEESSSCEEEEEETTTTEEEEEE
T ss_pred cceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEE--eCCEEEEEEccCCEEEEEECCcCcEEEEE
Confidence 4577787 3566778888999999999999988777 3322 2222333 34467777778999999999999988887
Q ss_pred CCCCceEEEEEcCCCCeEEEEecCCcEEEEeCCCCceEEEecCCC-----CceeEEEECCCCCEEEEEcCCCcEEEEeCC
Q 019006 182 PDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQ-----DMITGMSLSPDGSYLLTNGMDCKLCIWDMR 256 (347)
Q Consensus 182 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-----~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~ 256 (347)
+....-..++ ++++.|+.+..++.|.++|..+.+...++.-.. ..++.+.|. +|+..+..-.++.|.+.|..
T Consensus 133 ~~~~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~ 209 (268)
T 3nok_A 133 RYSGEGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDVLEIDPA 209 (268)
T ss_dssp ECSSCCCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEEEEECTT
T ss_pred eCCCceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeEEEEeCC
Confidence 6544333344 457788877778899999999988777664321 245677776 67655555567899999987
Q ss_pred CCCCcCceeEEEecc---------ccccccceEEEEECCCCCEEEEee
Q 019006 257 PYAPQNRCVKILEGH---------QHNFEKNLLKCGWSPDGSKVTAGS 295 (347)
Q Consensus 257 ~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~s~~g~~l~sgs 295 (347)
+ ++.+..+... .....+....++|+|+++.|+..+
T Consensus 210 T----G~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 210 T----GTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp T----CBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred C----CcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 4 3444444321 111224678899999876655544
No 245
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.90 E-value=2.7e-05 Score=75.31 Aligned_cols=266 Identities=9% Similarity=0.044 Sum_probs=161.5
Q ss_pred cccEEEEEECCCCCeEEEeeCCCcEEEEeccCCCeeeEEEeC--------cccceeEEEEcCCCCEEEEecCCCeEEEEE
Q 019006 57 QSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKG--------HKNAILDLHWTTDGSQIISASPDKTLRAWD 128 (347)
Q Consensus 57 ~~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~--------h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd 128 (347)
...|.++...+++.+.+. +.++-+.+|+.... .+..+.. ....|.++...++|...+.. .+| +.+||
T Consensus 214 ~~~i~~i~~d~~g~lwig-t~~~Gl~~~~~~~~--~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt-~~G-l~~~~ 288 (795)
T 4a2l_A 214 TKQIQAILQQSPTRIWVA-TEGAGLFLINPKTK--EIKNYLHSPSNPKSISSNYIRSLAMDSQNRLWIGT-FND-LNIYH 288 (795)
T ss_dssp CCCEEEEEEEETTEEEEE-EBSSCEEEEETTTT--EEEEECCCTTCTTSCSCSBEEEEEECTTSCEEEEE-SSC-EEEEE
T ss_pred CCeeEEEEEcCCCCEEEE-ECCCCeEEEeCCCC--eEEEeecCCCCccccCCCeEEEEEEcCCCCEEEEe-CCh-hheEc
Confidence 346778877777766554 43334788886432 1222211 13568999999888766544 444 88888
Q ss_pred CCCCceeeeee-------ccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeecC-------CCCceEEEEEcC
Q 019006 129 VETGKQIKKMA-------EHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFP-------DKYQITAVSFSD 194 (347)
Q Consensus 129 ~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~-------~~~~v~~~~~~~ 194 (347)
..+++...... .....|.++...+.+ .+..|+.++-|..++........... ....|.++..++
T Consensus 289 ~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g--~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~ 366 (795)
T 4a2l_A 289 EGTDSFASYSSNPVENGSLSQRSVRSIFMDSQG--GMWLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDK 366 (795)
T ss_dssp TTTTEEEEECCCTTSTTSCSSSCEEEEEECTTS--CEEEEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECT
T ss_pred CCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCc--CEEEEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECC
Confidence 77654322111 112346666655544 35667887888888875443221111 123588888887
Q ss_pred CCCeEEEEecCCcEEEEeCCCCceEEEecC--------CCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeE
Q 019006 195 ASDKIYTGGIDNDVKVWDLRKGEVSMTLQG--------HQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVK 266 (347)
Q Consensus 195 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~--------~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~ 266 (347)
++ .+..|+.++-|..||..+++...-... ....|.++...++++.|..|..++.|.++|.... . ..
T Consensus 367 ~g-~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~----~-~~ 440 (795)
T 4a2l_A 367 DK-NLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSG----Q-VE 440 (795)
T ss_dssp TS-CEEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTC----C-EE
T ss_pred CC-CEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCC----c-EE
Confidence 65 577788888899999877654332111 1356889988888874666677677999997632 1 12
Q ss_pred EEeccc-cccccceEEEEECCCCCEEEEeeCCCeEEEEeCCCceeeEEecC------CccCeeeEEEcCCCCEEEEec
Q 019006 267 ILEGHQ-HNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPG------HTGSVNESVFHATEPVIGSCS 337 (347)
Q Consensus 267 ~~~~~~-~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~~~~~~------h~~~v~~~~~~~~~~~l~s~s 337 (347)
.+.... ......+.++...++|.+.+... + -|.+||..+++....... +...|.++...+++.+.+.+.
T Consensus 441 ~~~~~~~~l~~~~v~~i~~d~~g~lwigt~-~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~ 516 (795)
T 4a2l_A 441 NFNQRNSQLVNENVYAILPDGEGNLWLGTL-S-ALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE 516 (795)
T ss_dssp EECTTTSCCSCSCEEEEEECSSSCEEEEES-S-CEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES
T ss_pred EeecCCCCcCCCeeEEEEECCCCCEEEEec-C-ceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeC
Confidence 222100 01124678888888888666544 4 589999887754332111 235688888888887666554
No 246
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.88 E-value=3.5e-07 Score=74.78 Aligned_cols=184 Identities=11% Similarity=0.144 Sum_probs=124.4
Q ss_pred eeEEEEcCCCCEEEEecCCC--eEEEEECCCCceeeeeeccCcc-eeEeecCCCCCCEEEEEcCCCceEEEeCCCCCcee
Q 019006 103 ILDLHWTTDGSQIISASPDK--TLRAWDVETGKQIKKMAEHNSF-VNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQ 179 (347)
Q Consensus 103 v~~~~~~~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~ 179 (347)
...+.|+ ++.+..+.+.+| .|+++|+.+++.+..+...... ...+... +..+.++.-.++.+.++|..+.+.+.
T Consensus 45 tqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~--g~~ly~ltw~~~~v~v~D~~t~~~~~ 121 (262)
T 3nol_A 45 TEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDW--KDKIVGLTWKNGLGFVWNIRNLRQVR 121 (262)
T ss_dssp EEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEESSSSEEEEEETTTCCEEE
T ss_pred cceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEe--CCEEEEEEeeCCEEEEEECccCcEEE
Confidence 4678888 666667777766 8999999999988877544332 1223332 34566666678999999999999888
Q ss_pred ecCCCCceEEEEEcCCCCeEEEEecCCcEEEEeCCCCceEEEecCCC-----CceeEEEECCCCCEEEEEcCCCcEEEEe
Q 019006 180 TFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQ-----DMITGMSLSPDGSYLLTNGMDCKLCIWD 254 (347)
Q Consensus 180 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-----~~i~~v~~~~~~~~l~t~~~d~~i~~wd 254 (347)
+++....-..++ +++..|+.+..++.|.++|..+.+...++.-.. ..++.+.|. +|+..+..-.++.|.+.|
T Consensus 122 ti~~~~eG~glt--~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vID 198 (262)
T 3nol_A 122 SFNYDGEGWGLT--HNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNKIVRID 198 (262)
T ss_dssp EEECSSCCCCEE--ECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEC
T ss_pred EEECCCCceEEe--cCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEccCCeEEEEE
Confidence 876544323333 467777777667889999999888777654321 335567776 676555555678999999
Q ss_pred CCCCCCcCceeEEEeccc--------cccccceEEEEECCCCCEEEEeeC
Q 019006 255 MRPYAPQNRCVKILEGHQ--------HNFEKNLLKCGWSPDGSKVTAGSS 296 (347)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~s~~g~~l~sgs~ 296 (347)
..+ ++....+.... .........++|+|+++.|...+.
T Consensus 199 p~t----G~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 199 PET----GKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp TTT----CBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred CCC----CcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 874 34444443211 111245688999999887776664
No 247
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.86 E-value=2.1e-07 Score=76.08 Aligned_cols=183 Identities=10% Similarity=0.024 Sum_probs=119.4
Q ss_pred ceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeecCCCCceEEEEEcCCCCeEEEEe-cCCcEEEEeCCCCceEEEe
Q 019006 144 FVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIYTGG-IDNDVKVWDLRKGEVSMTL 222 (347)
Q Consensus 144 ~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~ 222 (347)
+...+.+. +..++++.+.+|.|+.+|+++++.+..+ -..........++++.++... .++.+.+||..+.+.+.++
T Consensus 56 ftqGL~~~--~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti 132 (268)
T 3nok_A 56 FTQGLVFH--QGHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQRERTT 132 (268)
T ss_dssp CEEEEEEE--TTEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESSSCEEEEEETTTTEEEEEE
T ss_pred ccceEEEE--CCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEccCCEEEEEECCcCcEEEEE
Confidence 34455554 3467888889999999999999887766 333333322233455555544 6789999999999988887
Q ss_pred cCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEeccccc-cccceEEEEECCCCCEEEEeeCCCeEE
Q 019006 223 QGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHN-FEKNLLKCGWSPDGSKVTAGSSDRMVY 301 (347)
Q Consensus 223 ~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~s~~g~~l~sgs~dg~i~ 301 (347)
..... -..++ +++..|+.+..++.|.++|..+.+. ...+.-.... .-..+..+.|. +|...+....++.|.
T Consensus 133 ~~~~e-GwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v----~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~ 204 (268)
T 3nok_A 133 RYSGE-GWGLC--YWNGKLVRSDGGTMLTFHEPDGFAL----VGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDVL 204 (268)
T ss_dssp ECSSC-CCCEE--EETTEEEEECSSSEEEEECTTTCCE----EEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEEE
T ss_pred eCCCc-eeEEe--cCCCEEEEECCCCEEEEEcCCCCeE----EEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeEE
Confidence 64322 23444 5678887777788999999875432 2222211111 11234556665 776555555688999
Q ss_pred EEeCCCceeeEEecCC------------c-cCeeeEEEcCCCCEEEEec
Q 019006 302 IWDTTSRRILYKLPGH------------T-GSVNESVFHATEPVIGSCS 337 (347)
Q Consensus 302 vwd~~~~~~~~~~~~h------------~-~~v~~~~~~~~~~~l~s~s 337 (347)
+.|..+++.+.++.-. . ...+.+||+|+++.|.-++
T Consensus 205 vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 205 EIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp EECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred EEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 9999999998876532 1 2458999999866444444
No 248
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.86 E-value=2e-05 Score=76.21 Aligned_cols=266 Identities=7% Similarity=0.031 Sum_probs=158.3
Q ss_pred EEEEEECCCCCeEEEeeCCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEECCCCceeeeee
Q 019006 60 VYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMA 139 (347)
Q Consensus 60 V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 139 (347)
|.++...+++.+.+ |..++-+..|+.............+...|.++...+++.+.+....+| +.+||..+++......
T Consensus 175 i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lwigt~~~G-l~~~~~~~~~~~~~~~ 252 (795)
T 4a2l_A 175 IASTLYRQGDQIYI-GTSTDGLYTYSITQKTFEKVIPILGTKQIQAILQQSPTRIWVATEGAG-LFLINPKTKEIKNYLH 252 (795)
T ss_dssp CEEEEEEETTEEEE-EESSSCEEEEETTTCCEEECC----CCCEEEEEEEETTEEEEEEBSSC-EEEEETTTTEEEEECC
T ss_pred eEEEEECCCCCEEE-EECCCCEEEEeCCCCeEEEecCCCCCCeeEEEEEcCCCCEEEEECCCC-eEEEeCCCCeEEEeec
Confidence 77787777776555 555545888886432211110112345688888887776555443444 8888987654322111
Q ss_pred c-------cCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeecC--------CCCceEEEEEcCCCCeEEEEec
Q 019006 140 E-------HNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFP--------DKYQITAVSFSDASDKIYTGGI 204 (347)
Q Consensus 140 ~-------~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~--------~~~~v~~~~~~~~~~~l~~~~~ 204 (347)
. ....+.++.....+ . +..|+.+ -+.+||..++....... ....|.++..++++ .+..|+.
T Consensus 253 ~~~~~~~l~~~~i~~i~~d~~g-~-lWigt~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g-~lWigt~ 328 (795)
T 4a2l_A 253 SPSNPKSISSNYIRSLAMDSQN-R-LWIGTFN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQG-GMWLGTY 328 (795)
T ss_dssp CTTCTTSCSCSBEEEEEECTTS-C-EEEEESS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTS-CEEEEES
T ss_pred CCCCccccCCCeEEEEEEcCCC-C-EEEEeCC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCc-CEEEEEC
Confidence 1 12346666555444 3 4455555 58888877654332211 12458888888765 4777888
Q ss_pred CCcEEEEeCCCCceEEEec------CCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEeccc-----c
Q 019006 205 DNDVKVWDLRKGEVSMTLQ------GHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQ-----H 273 (347)
Q Consensus 205 dg~i~iwd~~~~~~~~~~~------~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~-----~ 273 (347)
++-|..|+........-.. .....|.++...++|+.. .|..++.|..||.... . ...+.... .
T Consensus 329 ~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~lW-iGt~~~Gl~~~~~~~~----~-~~~~~~~~~~~~~~ 402 (795)
T 4a2l_A 329 FGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKNLW-IGTNDGGLNLYNPITQ----R-FTSYTLQEDESARG 402 (795)
T ss_dssp SSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSCEE-EEESSSCEEEECTTTC----C-EEEECCC------C
T ss_pred CCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCCEE-EEECCCCeEEEcCCCC----c-EEEEecCCCCcccC
Confidence 8889999876543222111 023458899988887744 4666667999986532 1 11221100 0
Q ss_pred ccccceEEEEECCCCCEEEEeeCCCeEEEEeCCCceeeEEec----CCccCeeeEEEcCCCCEEEEec
Q 019006 274 NFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLP----GHTGSVNESVFHATEPVIGSCS 337 (347)
Q Consensus 274 ~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~~~~~----~h~~~v~~~~~~~~~~~l~s~s 337 (347)
.....|.++...++|.+|..|+.++-|.+||..+++...... -+...|.++...+++.+.+.+.
T Consensus 403 l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~ 470 (795)
T 4a2l_A 403 IGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTL 470 (795)
T ss_dssp CSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEES
T ss_pred CCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEec
Confidence 112467888888888866678887789999988876443221 1245788888888887665544
No 249
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.86 E-value=9.3e-08 Score=87.09 Aligned_cols=221 Identities=16% Similarity=0.149 Sum_probs=140.6
Q ss_pred CCCEEEEec-CCCeEEEEECCCCceeeeeecc-CcceeEeec-C-CCCCCEEEEE-----------------cCCCceEE
Q 019006 111 DGSQIISAS-PDKTLRAWDVETGKQIKKMAEH-NSFVNSCCP-S-RRGPPLVVSG-----------------SDDGTAKL 169 (347)
Q Consensus 111 ~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~-~~~v~~~~~-~-~~~~~~~~s~-----------------~~d~~i~i 169 (347)
||++++... .+..|.+.|+.+.+....+... ......+.+ . +++..+++++ -.++.+.+
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtv 179 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTA 179 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEE
Confidence 777776554 5677999999998876633221 122334444 2 4554444442 33457888
Q ss_pred EeCCCCCceeecCCCCceEEEEEcCCCCeEEEEecCC--------------------------------------cEEEE
Q 019006 170 WDMRQRGAIQTFPDKYQITAVSFSDASDKIYTGGIDN--------------------------------------DVKVW 211 (347)
Q Consensus 170 wd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--------------------------------------~i~iw 211 (347)
+|..+.+....+.-......++++|+++++++.+.+. .|.+.
T Consensus 180 ID~~t~~v~~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VI 259 (595)
T 1fwx_A 180 VDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVV 259 (595)
T ss_dssp EETTTTEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEE
T ss_pred EECCCCeEEEEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEE
Confidence 9998877666654323455677899999888877543 46677
Q ss_pred eCCC--Cce-EEEecCCCCceeEEEECCCCCEEEEEc-CCCcEEEEeCCCCC--------CcCceeEEEeccccccccce
Q 019006 212 DLRK--GEV-SMTLQGHQDMITGMSLSPDGSYLLTNG-MDCKLCIWDMRPYA--------PQNRCVKILEGHQHNFEKNL 279 (347)
Q Consensus 212 d~~~--~~~-~~~~~~~~~~i~~v~~~~~~~~l~t~~-~d~~i~~wd~~~~~--------~~~~~~~~~~~~~~~~~~~~ 279 (347)
|.++ ++. ...+.. .....++.++|||+++++++ .+.+|.++|+.... +........ ..-...
T Consensus 260 D~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v-----~vG~gP 333 (595)
T 1fwx_A 260 DGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEP-----ELGLGP 333 (595)
T ss_dssp ECSGGGCCSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECC-----BCCSCE
T ss_pred eCcccCCceeEEEEec-CCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEc-----CCCCCc
Confidence 7766 333 333332 12357799999999887765 56899999987421 000111111 111346
Q ss_pred EEEEECCCCCEEEEeeCCCeEEEEeCCC----------ceeeEEecCCccC-----eeeEEEcCCCCEEEEec
Q 019006 280 LKCGWSPDGSKVTAGSSDRMVYIWDTTS----------RRILYKLPGHTGS-----VNESVFHATEPVIGSCS 337 (347)
Q Consensus 280 ~~~~~s~~g~~l~sgs~dg~i~vwd~~~----------~~~~~~~~~h~~~-----v~~~~~~~~~~~l~s~s 337 (347)
..++|+|+|...++.-.|++|.+||+.. .+.+.+++-|-.+ -....++|++++|.++.
T Consensus 334 ~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~N 406 (595)
T 1fwx_A 334 LHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLS 406 (595)
T ss_dssp EEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEE
T ss_pred ceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcC
Confidence 7889999994344566899999999877 5677777765332 23446789999888765
No 250
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.85 E-value=6.7e-07 Score=84.62 Aligned_cols=258 Identities=14% Similarity=0.128 Sum_probs=147.0
Q ss_pred CCeEEEeeCCCcEEEEeccCCCeeeEEEeCc-ccceeEEEEcC--CCCEEEEecC------CCeEEEEECCCCceeeeee
Q 019006 69 GTVIASGSHDRDIFLWHVHGDCKNFMVLKGH-KNAILDLHWTT--DGSQIISASP------DKTLRAWDVETGKQIKKMA 139 (347)
Q Consensus 69 ~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h-~~~v~~~~~~~--~~~~l~s~~~------dg~i~iwd~~~~~~~~~~~ 139 (347)
+..++.++.|+.|+.+|.... +........ ......+.-+| .+..++.+.. +|.|..+|..+|+.+.++.
T Consensus 117 ~~~v~v~~~dg~l~alD~~tG-~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 195 (668)
T 1kv9_A 117 GDKVYVGTLDGRLIALDAKTG-KAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFY 195 (668)
T ss_dssp BTEEEEECTTSEEEEEETTTC-CEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred CCEEEEEcCCCEEEEEECCCC-CEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEec
Confidence 456778888999999987533 222222221 00000000011 1335555432 5899999999999887764
Q ss_pred ccCc--c----------------------------e-eEeecCCCCCCEEEEEcCCC-------------------ceEE
Q 019006 140 EHNS--F----------------------------V-NSCCPSRRGPPLVVSGSDDG-------------------TAKL 169 (347)
Q Consensus 140 ~~~~--~----------------------------v-~~~~~~~~~~~~~~s~~~d~-------------------~i~i 169 (347)
.... . + ...+..+. ..+++.++.++ .|..
T Consensus 196 ~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~-~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~A 274 (668)
T 1kv9_A 196 TVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPE-LDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILA 274 (668)
T ss_dssp SSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETT-TTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEE
T ss_pred ccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCC-CCEEEEeCCCCCccccCCCCCCCCCceeeeeEEE
Confidence 3110 0 0 01122222 24666676665 3889
Q ss_pred EeCCCCCceeecCCC----------CceEEEEEcCCCC---eEEEEecCCcEEEEeCCCCceEEEecCCC----------
Q 019006 170 WDMRQRGAIQTFPDK----------YQITAVSFSDASD---KIYTGGIDNDVKVWDLRKGEVSMTLQGHQ---------- 226 (347)
Q Consensus 170 wd~~~~~~~~~~~~~----------~~v~~~~~~~~~~---~l~~~~~dg~i~iwd~~~~~~~~~~~~~~---------- 226 (347)
+|.++++.+..++.. .......+..+++ .++.++.+|.++++|.++++.+.......
T Consensus 275 lD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~ 354 (668)
T 1kv9_A 275 IRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLA 354 (668)
T ss_dssp ECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTT
T ss_pred EcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccc
Confidence 999998877655321 1222222223454 58889999999999999998774332111
Q ss_pred --Cc------------------------eeEEEECCCCCEEEEE------------------------------------
Q 019006 227 --DM------------------------ITGMSLSPDGSYLLTN------------------------------------ 244 (347)
Q Consensus 227 --~~------------------------i~~v~~~~~~~~l~t~------------------------------------ 244 (347)
.+ -..++++|+...++..
T Consensus 355 ~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~ 434 (668)
T 1kv9_A 355 TGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAA 434 (668)
T ss_dssp TCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGG
T ss_pred cCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCC
Confidence 00 0125677766655531
Q ss_pred cCCCcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCCceeeEEecCCccCe-ee
Q 019006 245 GMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSV-NE 323 (347)
Q Consensus 245 ~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~v-~~ 323 (347)
..+|.|..||+.+.+ .+-..+... ......+...+.+++.|+.||.++.||..+++++.+++...+.. .-
T Consensus 435 ~~~g~l~A~D~~tG~----~~W~~~~~~-----~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~~~~~~p 505 (668)
T 1kv9_A 435 VVSGALLAWDPVKQK----AAWKVPYPT-----HWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAP 505 (668)
T ss_dssp GCEEEEEEEETTTTE----EEEEEEESS-----SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCC
T ss_pred CccceEEEEeCCCCc----EEEEccCCC-----CCcCceeEeCCCEEEEECCcccchhhhhhcChhheEecCCCCcccCc
Confidence 123778888886432 222222111 11222344568899999999999999999999998887554322 34
Q ss_pred EEEcCCCC-EEEEec
Q 019006 324 SVFHATEP-VIGSCS 337 (347)
Q Consensus 324 ~~~~~~~~-~l~s~s 337 (347)
+.+..+++ +++.++
T Consensus 506 ~~~~~~G~~yva~~~ 520 (668)
T 1kv9_A 506 MTFELAGRQYVAIMA 520 (668)
T ss_dssp EEEEETTEEEEEEEE
T ss_pred eEEEECCEEEEEEEe
Confidence 44555555 444433
No 251
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.85 E-value=4.8e-07 Score=85.59 Aligned_cols=269 Identities=10% Similarity=0.040 Sum_probs=142.7
Q ss_pred EEEECC-CCCeEEEeeCCC-----------cEEEEeccCC-CeeeEEEeC-cccceeEEEEcCCCCEEEEecC-CCeEEE
Q 019006 62 TMKFNP-AGTVIASGSHDR-----------DIFLWHVHGD-CKNFMVLKG-HKNAILDLHWTTDGSQIISASP-DKTLRA 126 (347)
Q Consensus 62 ~v~~~~-~~~~l~s~~~d~-----------~v~~w~~~~~-~~~~~~~~~-h~~~v~~~~~~~~~~~l~s~~~-dg~i~i 126 (347)
+.++.| ++++++.|+.+. .+.+||...+ ......+.. +.....++++..++..++.|+. +..+.+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence 445566 888888887653 4788887543 222333322 2233345678889999999884 458999
Q ss_pred EECCCCceeeeeecc-CcceeEeecCCCCCCEEEEEc-CC-----CceEEEeCCCCCceee-------cCCCCceEEEEE
Q 019006 127 WDVETGKQIKKMAEH-NSFVNSCCPSRRGPPLVVSGS-DD-----GTAKLWDMRQRGAIQT-------FPDKYQITAVSF 192 (347)
Q Consensus 127 wd~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~s~~-~d-----~~i~iwd~~~~~~~~~-------~~~~~~v~~~~~ 192 (347)
||..+.+-...-... ...-..++..++ +.+++.|+ .+ ..+.+||..+..-... +..... ...+
T Consensus 270 yd~~t~~W~~~~~~~~~R~~~s~~~~~d-g~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~--~~~~ 346 (656)
T 1k3i_A 270 YDSSSDSWIPGPDMQVARGYQSSATMSD-GRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADK--QGLY 346 (656)
T ss_dssp EEGGGTEEEECCCCSSCCSSCEEEECTT-SCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCT--TGGG
T ss_pred ecCcCCceeECCCCCccccccceEEecC-CeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccc--ccee
Confidence 998876432211111 111122233323 45777777 34 5688999876543221 111100 0111
Q ss_pred cCCCCeEEEEecCC---------cEEEEeCCCCceEEEecCCC---------CceeEEEEC-CCCCEEEEEcCCC-----
Q 019006 193 SDASDKIYTGGIDN---------DVKVWDLRKGEVSMTLQGHQ---------DMITGMSLS-PDGSYLLTNGMDC----- 248 (347)
Q Consensus 193 ~~~~~~l~~~~~dg---------~i~iwd~~~~~~~~~~~~~~---------~~i~~v~~~-~~~~~l~t~~~d~----- 248 (347)
..++..++.|+.+| .+..||..+.........+. ..-.++.|. .+++.++.||.++
T Consensus 347 ~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~ 426 (656)
T 1k3i_A 347 RSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSD 426 (656)
T ss_dssp TTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSB
T ss_pred ecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCC
Confidence 23344445554443 46788887664332221111 112334443 3667777777432
Q ss_pred ------cEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEEEEeeCC-----------CeEEEEeCCCceee
Q 019006 249 ------KLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSD-----------RMVYIWDTTSRRIL 311 (347)
Q Consensus 249 ------~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~d-----------g~i~vwd~~~~~~~ 311 (347)
.+.+||.... .... ..............+...|+|+.++.|+.+ ..+.+||..+.+-.
T Consensus 427 ~~~~~~~v~~yd~~~~----~W~~-~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~ 501 (656)
T 1k3i_A 427 ATTNAHIITLGEPGTS----PNTV-FASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFY 501 (656)
T ss_dssp CCCCEEEEECCSTTSC----CEEE-ECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEE
T ss_pred cCCcceEEEcCCCCCC----CeeE-EccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCcee
Confidence 5667765431 1211 110011111223344567899999999854 46899998876532
Q ss_pred E--EecCCccCeeeEEEcCCCCEEEEecC
Q 019006 312 Y--KLPGHTGSVNESVFHATEPVIGSCSS 338 (347)
Q Consensus 312 ~--~~~~h~~~v~~~~~~~~~~~l~s~s~ 338 (347)
. .++.....-....+.|++++++.+|.
T Consensus 502 ~~~~~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 502 KQNPNSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp ECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred ecCCCCCccccccHhhcCCCcEEEecCCC
Confidence 1 12211222234456789999999885
No 252
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.83 E-value=3.3e-06 Score=78.36 Aligned_cols=269 Identities=13% Similarity=0.086 Sum_probs=155.4
Q ss_pred CCeEEEeeC-CCcEEEEec-cCCCeeeEEEeCccc-c---------e-eEEEEcCCCCEEEEecCCCeEEEEECCCCcee
Q 019006 69 GTVIASGSH-DRDIFLWHV-HGDCKNFMVLKGHKN-A---------I-LDLHWTTDGSQIISASPDKTLRAWDVETGKQI 135 (347)
Q Consensus 69 ~~~l~s~~~-d~~v~~w~~-~~~~~~~~~~~~h~~-~---------v-~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~ 135 (347)
+..+..++. ++.|+-+|. .... ..-....... . + ..+.. .+..++.++.|+.+..+|..+++.+
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~-~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~ 138 (571)
T 2ad6_A 62 GDMMYVHSAFPNNTYALNLNDPGK-IVWQHKPKQDASTKAVMCCDVVDRGLAY--GAGQIVKKQANGHLLALDAKTGKIN 138 (571)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTS-EEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEE
T ss_pred CCEEEEEeCCCCEEEEEeCCCCcc-EEEEEcCCCCccccccccccccccccEE--ECCEEEEEeCCCEEEEEECCCCCEE
Confidence 445555666 788888887 4322 2222211110 0 0 11222 3567888889999999999999987
Q ss_pred eeeeccCcce-eEeecCC--CCCCEEEEEcC------CCceEEEeCCCCCceeecCCCCce-------------------
Q 019006 136 KKMAEHNSFV-NSCCPSR--RGPPLVVSGSD------DGTAKLWDMRQRGAIQTFPDKYQI------------------- 187 (347)
Q Consensus 136 ~~~~~~~~~v-~~~~~~~--~~~~~~~s~~~------d~~i~iwd~~~~~~~~~~~~~~~v------------------- 187 (347)
.+........ ..+...+ .+ ..++.++. ++.|..+|.++++.+..+......
T Consensus 139 W~~~~~~~~~~~~~~~~P~v~~-g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~ 217 (571)
T 2ad6_A 139 WEVEVCDPKVGSTLTQAPFVAK-DTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQF 217 (571)
T ss_dssp EEEECCCGGGTCBCCSCCEEET-TEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCS
T ss_pred EEecCCCCCccceeccCCEEEC-CEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCccccccccccccc
Confidence 7654322100 0011011 12 24555554 789999999988876544321110
Q ss_pred --------------------EEEEEcCCCCeEEEEecC----------------CcEEEEeCCCCceEEEecCCCC----
Q 019006 188 --------------------TAVSFSDASDKIYTGGID----------------NDVKVWDLRKGEVSMTLQGHQD---- 227 (347)
Q Consensus 188 --------------------~~~~~~~~~~~l~~~~~d----------------g~i~iwd~~~~~~~~~~~~~~~---- 227 (347)
..+++++....++.++.+ +.|..+|.++++.+..++....
T Consensus 218 ~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d 297 (571)
T 2ad6_A 218 GLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWD 297 (571)
T ss_dssp SHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSC
T ss_pred ccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccc
Confidence 235566766777766532 2599999999998877653210
Q ss_pred --ceeE---EEECCCCC---EEEEEcCCCcEEEEeCCCCCCcCceeEEEeccc-cc------------c-----------
Q 019006 228 --MITG---MSLSPDGS---YLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQ-HN------------F----------- 275 (347)
Q Consensus 228 --~i~~---v~~~~~~~---~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~-~~------------~----------- 275 (347)
.+.. +....+|+ .++.++.+|.+.++|..+.+. +...+... .. .
T Consensus 298 ~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~----~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~ 373 (571)
T 2ad6_A 298 FAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNL----IVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDH 373 (571)
T ss_dssp CCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCE----EEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTC
T ss_pred cccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCE----EeeecccCCccccccccccCCceecccccCCCCCC
Confidence 1111 22223563 567788899999999875432 11111100 00 0
Q ss_pred cc-----------ceEEEEECCCCCEEEEee-------------------------------------CCCeEEEEeCCC
Q 019006 276 EK-----------NLLKCGWSPDGSKVTAGS-------------------------------------SDRMVYIWDTTS 307 (347)
Q Consensus 276 ~~-----------~~~~~~~s~~g~~l~sgs-------------------------------------~dg~i~vwd~~~ 307 (347)
.. .-..++++|+..+|+..+ .+|.|+.||+.+
T Consensus 374 ~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~t 453 (571)
T 2ad6_A 374 KGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTT 453 (571)
T ss_dssp CEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTT
T ss_pred CceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCC
Confidence 00 002356788877776653 357899999999
Q ss_pred ceeeEEecCCccCeeeEEEcCCCCEEEEecCCCcEEeec
Q 019006 308 RRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGE 346 (347)
Q Consensus 308 ~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~i~~ 346 (347)
++.+.+++.. ..+....+...+..+..++.|+.|+.+|
T Consensus 454 G~~~W~~~~~-~~~~~~~~~t~gg~v~~g~~dg~l~a~D 491 (571)
T 2ad6_A 454 GKAKWTKWEK-FAAWGGTLYTKGGLVWYATLDGYLKALD 491 (571)
T ss_dssp CCEEEEEEES-SCCCSBCEEETTTEEEEECTTSEEEEEE
T ss_pred CCEEEEecCC-CCccceeEEECCCEEEEEcCCCeEEEEE
Confidence 9998877532 2333333344456666788999999887
No 253
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.83 E-value=1.6e-06 Score=70.24 Aligned_cols=186 Identities=14% Similarity=0.084 Sum_probs=118.6
Q ss_pred cceeEeecCCCCCCEEEEEcCCC--ceEEEeCCCCCceeecCCCCceEEEEEcCCCCeEEEEe-cCCcEEEEeCCCCceE
Q 019006 143 SFVNSCCPSRRGPPLVVSGSDDG--TAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIYTGG-IDNDVKVWDLRKGEVS 219 (347)
Q Consensus 143 ~~v~~~~~~~~~~~~~~s~~~d~--~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~ 219 (347)
.+...+.+.. ..++.+.+.+| .|+.+|+.+++.+...+-........+...++.++... .++.+.+||..+.+.+
T Consensus 21 ~ftqGL~~~~--~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~~~ 98 (243)
T 3mbr_X 21 AFTEGLFYLR--GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEGFVYDLATLTPR 98 (243)
T ss_dssp CCEEEEEEET--TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTTEEE
T ss_pred cccccEEEEC--CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCEEEEEECCcCcEE
Confidence 3455566554 35666666654 89999999999888765443333333333456666544 6789999999999988
Q ss_pred EEecCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEeccccccc-cceEEEEECCCCCEEEEeeCCC
Q 019006 220 MTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFE-KNLLKCGWSPDGSKVTAGSSDR 298 (347)
Q Consensus 220 ~~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~g~~l~sgs~dg 298 (347)
.++..... =..++ +++..|+.+..++.|.++|..+++. ...+.-...... ..+..+.|. +|+..+....+.
T Consensus 99 ~ti~~~~~-Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~----~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~ 170 (243)
T 3mbr_X 99 ARFRYPGE-GWALT--SDDSHLYMSDGTAVIRKLDPDTLQQ----VGSIKVTAGGRPLDNLNELEWV-NGELLANVWLTS 170 (243)
T ss_dssp EEEECSSC-CCEEE--ECSSCEEEECSSSEEEEECTTTCCE----EEEEECEETTEECCCEEEEEEE-TTEEEEEETTTT
T ss_pred EEEeCCCC-ceEEe--eCCCEEEEECCCCeEEEEeCCCCeE----EEEEEEccCCcccccceeeEEe-CCEEEEEECCCC
Confidence 88764322 23444 5666666666688999999876432 222222111111 234445554 666555555678
Q ss_pred eEEEEeCCCceeeEEecCC------------c-cCeeeEEEcCCCCEEEEecC
Q 019006 299 MVYIWDTTSRRILYKLPGH------------T-GSVNESVFHATEPVIGSCSS 338 (347)
Q Consensus 299 ~i~vwd~~~~~~~~~~~~h------------~-~~v~~~~~~~~~~~l~s~s~ 338 (347)
.|.+.|..+++.+..+.-. . ...+.+||+|+.+.|.-++.
T Consensus 171 ~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 171 RIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp EEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred eEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 9999999999998876522 1 24589999998765555543
No 254
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.83 E-value=9.1e-06 Score=69.64 Aligned_cols=234 Identities=11% Similarity=0.020 Sum_probs=141.4
Q ss_pred ceeEEEEcCCCCEEEEecCCCeEEEEECCCCceeeeeecc--------------------CcceeEeecCCCCCCEEEEE
Q 019006 102 AILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEH--------------------NSFVNSCCPSRRGPPLVVSG 161 (347)
Q Consensus 102 ~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~--------------------~~~v~~~~~~~~~~~~~~s~ 161 (347)
...+++|+++++.++++..++.|..|+..+++. ..+... ......+++.+.+..+++ +
T Consensus 20 ~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v-~ 97 (322)
T 2fp8_A 20 APNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGF-VDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYI-V 97 (322)
T ss_dssp CCCCEECCTTCSSEEEECTTSEEEEECCTTTCE-EEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEE-E
T ss_pred CceEEEEcCCCCEEEEEcCCCeEEEECCCCCce-EEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEE-E
Confidence 456788999988788888899999998776543 222110 112344555542334444 4
Q ss_pred cCCCceEEEeCCCCCceeec---CC--CCceEEEEEcC-CCCeEEEEec-----------------CCcEEEEeCCCCce
Q 019006 162 SDDGTAKLWDMRQRGAIQTF---PD--KYQITAVSFSD-ASDKIYTGGI-----------------DNDVKVWDLRKGEV 218 (347)
Q Consensus 162 ~~d~~i~iwd~~~~~~~~~~---~~--~~~v~~~~~~~-~~~~l~~~~~-----------------dg~i~iwd~~~~~~ 218 (347)
...+.+..+|..++...... .. ......+++++ ++...++-.. ++.|..||..+++.
T Consensus 98 d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~ 177 (322)
T 2fp8_A 98 DCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKET 177 (322)
T ss_dssp ETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEE
T ss_pred ECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEE
Confidence 44455788887644321111 11 12467899999 8865554322 36788999876654
Q ss_pred EEEecCCCCceeEEEECCCCCEEEEE-cCCCcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEEEEeeC-
Q 019006 219 SMTLQGHQDMITGMSLSPDGSYLLTN-GMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSS- 296 (347)
Q Consensus 219 ~~~~~~~~~~i~~v~~~~~~~~l~t~-~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~- 296 (347)
...... ....+.++++|++++|+.+ ...+.|..|++..... .. ...+.. ... ...+++.++|.+.++...
T Consensus 178 ~~~~~~-~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~-~~-~~~~~~----~~g-P~gi~~d~~G~l~va~~~~ 249 (322)
T 2fp8_A 178 TLLLKE-LHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKK-GT-AEVLVK----IPN-PGNIKRNADGHFWVSSSEE 249 (322)
T ss_dssp EEEEEE-ESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTT-TC-EEEEEE----CSS-EEEEEECTTSCEEEEEEEE
T ss_pred EEeccC-CccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcC-Cc-cceEEe----CCC-CCCeEECCCCCEEEEecCc
Confidence 332221 1335789999999866554 5568999999864211 11 111211 112 566788999987776544
Q ss_pred ---------CCeEEEEeCCCceeeEEecCCc----cCeeeEEEcCCCCEEEEecCCCcEEeecC
Q 019006 297 ---------DRMVYIWDTTSRRILYKLPGHT----GSVNESVFHATEPVIGSCSSDKQIYLGEI 347 (347)
Q Consensus 297 ---------dg~i~vwd~~~~~~~~~~~~h~----~~v~~~~~~~~~~~l~s~s~D~~i~i~~~ 347 (347)
.+.|..+|.. ++.+..+.... ..+..+++ .++.+.++...++.|..+++
T Consensus 250 ~~~~~~~~~~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~ 311 (322)
T 2fp8_A 250 LDGNMHGRVDPKGIKFDEF-GNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVY 311 (322)
T ss_dssp TTSSTTSCEEEEEEEECTT-SCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC
T ss_pred ccccccCCCccEEEEECCC-CCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEec
Confidence 4679999875 66666654432 34666776 46677777777777776653
No 255
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.82 E-value=1.9e-05 Score=65.69 Aligned_cols=215 Identities=7% Similarity=-0.064 Sum_probs=128.6
Q ss_pred CeEEEEECCCCcee-----eeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeecCCC-CceEEEEEcCC
Q 019006 122 KTLRAWDVETGKQI-----KKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDK-YQITAVSFSDA 195 (347)
Q Consensus 122 g~i~iwd~~~~~~~-----~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~~~-~~v~~~~~~~~ 195 (347)
+.|+.++++..... ..+.........+++.+.+..++++-..++.|..++............. .....++++++
T Consensus 10 ~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~ 89 (267)
T 1npe_A 10 GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHL 89 (267)
T ss_dssp EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETT
T ss_pred CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEec
Confidence 46777777654321 0111112233456666666667777778889999998765443333322 46788999997
Q ss_pred CCeEEEE-ecCCcEEEEeCCCCceEEEecCCCCceeEEEECCCCCEEEEEcC---CCcEEEEeCCCCCCcCceeEEEecc
Q 019006 196 SDKIYTG-GIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGM---DCKLCIWDMRPYAPQNRCVKILEGH 271 (347)
Q Consensus 196 ~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~~---d~~i~~wd~~~~~~~~~~~~~~~~~ 271 (347)
++.++.+ ...+.|.++++..................++++|++..|..+.. .+.|..+++... ....+...
T Consensus 90 ~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~-----~~~~~~~~ 164 (267)
T 1npe_A 90 GRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGT-----NRRILAQD 164 (267)
T ss_dssp TTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSC-----CCEEEECT
T ss_pred CCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCC-----CcEEEEEC
Confidence 7766655 45678999998644322222222245688999997666555443 367888886521 11122111
Q ss_pred ccccccceEEEEECCCCCEEEEe-eCCCeEEEEeCCCceeeEEecCCccCeeeEEEcCCCCEEEEecCCCcEEeec
Q 019006 272 QHNFEKNLLKCGWSPDGSKVTAG-SSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGE 346 (347)
Q Consensus 272 ~~~~~~~~~~~~~s~~g~~l~sg-s~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~i~~ 346 (347)
. ......++++|++..|..+ ...+.|+++|.........+.+ ......++.. .+.++++...++.|...|
T Consensus 165 --~-~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~-~~~P~gi~~d-~~~lyva~~~~~~v~~~d 235 (267)
T 1npe_A 165 --N-LGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEG-LQYPFAVTSY-GKNLYYTDWKTNSVIAMD 235 (267)
T ss_dssp --T-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEEC-CCSEEEEEEE-TTEEEEEETTTTEEEEEE
T ss_pred --C-CCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecC-CCCceEEEEe-CCEEEEEECCCCeEEEEe
Confidence 1 1346788999988776554 4568999999986554433332 2234566664 455666655667777654
No 256
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.81 E-value=4e-05 Score=65.13 Aligned_cols=227 Identities=10% Similarity=0.087 Sum_probs=133.9
Q ss_pred ccEEEEEECCCCCeEEEeeCCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEecCC-C-eEEEEECCCCcee
Q 019006 58 SAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPD-K-TLRAWDVETGKQI 135 (347)
Q Consensus 58 ~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d-g-~i~iwd~~~~~~~ 135 (347)
.....++|+++|+++++-..++.|..|+..+.... .+. -......+++.++++.+++.... + .|..++..+++..
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~~~--~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~ 108 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGNQQI--HAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVE 108 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEE--EEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEE
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCceEE--EEe-CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEE
Confidence 56789999999998877778899999987653222 222 23467889999999866655432 2 4666777776643
Q ss_pred eeeec-cCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCC-cee---------ec-CCCCceEEEEEcCCCCeEEEE-
Q 019006 136 KKMAE-HNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRG-AIQ---------TF-PDKYQITAVSFSDASDKIYTG- 202 (347)
Q Consensus 136 ~~~~~-~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~-~~~---------~~-~~~~~v~~~~~~~~~~~l~~~- 202 (347)
..... ........+... +..++++-..++.|..+|...+. .+. .. ..-...+.+ +++++.++.+
T Consensus 109 ~~~~~~~~~~~~g~~~~~-~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d 185 (306)
T 2p4o_A 109 TLLTLPDAIFLNGITPLS-DTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSN 185 (306)
T ss_dssp EEEECTTCSCEEEEEESS-SSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEE
T ss_pred EEEeCCCccccCcccccC-CCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEe
Confidence 22211 111222222222 23345555567888888876432 111 00 111234445 7777776655
Q ss_pred ecCCcEEEEeCCC-Cce--EEEecCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEeccccccccce
Q 019006 203 GIDNDVKVWDLRK-GEV--SMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNL 279 (347)
Q Consensus 203 ~~dg~i~iwd~~~-~~~--~~~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (347)
...+.|..||+.. ++. ...+. .......|+++++|++.++....+.|.++|.. ..... +...... ....
T Consensus 186 ~~~~~I~~~~~~~~g~~~~~~~~~-~~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-----G~~~~-~~~~~~~-~~~p 257 (306)
T 2p4o_A 186 TEKMLLLRIPVDSTDKPGEPEIFV-EQTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-----RSTTI-IAQAEQG-VIGS 257 (306)
T ss_dssp TTTTEEEEEEBCTTSCBCCCEEEE-ESCCCSSEEEBTTCCEEEECBTTCCEEEECTT-----CCEEE-EECGGGT-CTTE
T ss_pred CCCCEEEEEEeCCCCCCCccEEEe-ccCCCCCeEECCCCCEEEEeCCCCeEEEECCC-----CCEEE-Eeecccc-cCCc
Confidence 4567899999864 321 11111 11245778999999887777777889999853 22211 1111111 1357
Q ss_pred EEEEEC---CCCCEEEEeeCCC
Q 019006 280 LKCGWS---PDGSKVTAGSSDR 298 (347)
Q Consensus 280 ~~~~~s---~~g~~l~sgs~dg 298 (347)
.+++|. |++..|+..+..+
T Consensus 258 ~~~a~~g~~~d~~~LyVt~~~~ 279 (306)
T 2p4o_A 258 TAVAFGQTEGDCTAIYVVTNGG 279 (306)
T ss_dssp EEEEECCSTTTTTEEEEEECTT
T ss_pred eEEEEecccCCCCEEEEECCCC
Confidence 888998 8888777666543
No 257
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.78 E-value=9.5e-06 Score=75.40 Aligned_cols=269 Identities=13% Similarity=0.089 Sum_probs=154.5
Q ss_pred CCeEEEeeC-CCcEEEEec-cCCCeeeEEEeCccc-----------ceeEEEEcCCCCE----EEEecCCCeEEEEECCC
Q 019006 69 GTVIASGSH-DRDIFLWHV-HGDCKNFMVLKGHKN-----------AILDLHWTTDGSQ----IISASPDKTLRAWDVET 131 (347)
Q Consensus 69 ~~~l~s~~~-d~~v~~w~~-~~~~~~~~~~~~h~~-----------~v~~~~~~~~~~~----l~s~~~dg~i~iwd~~~ 131 (347)
+..+..++. ++.|+-+|. ... +..-....... ....++.+|.+.. |+.++.|+.+..+|..+
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG-~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~T 140 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPG-TILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAET 140 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTT-SEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTT
T ss_pred CCEEEEEeCCCCEEEEEeCCCCC-cEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCC
Confidence 445556666 788888887 432 22222221110 0122445444444 88888999999999999
Q ss_pred CceeeeeeccCc----ceeEeecCCCCCCEEEEEc------CCCceEEEeCCCCCceeecCCCCce--------------
Q 019006 132 GKQIKKMAEHNS----FVNSCCPSRRGPPLVVSGS------DDGTAKLWDMRQRGAIQTFPDKYQI-------------- 187 (347)
Q Consensus 132 ~~~~~~~~~~~~----~v~~~~~~~~~~~~~~s~~------~d~~i~iwd~~~~~~~~~~~~~~~v-------------- 187 (347)
|+.+.+...... .+.. .+.-.+ ..++.++ .++.|+.+|.++++.+..+......
T Consensus 141 G~~~W~~~~~~~~~~~~~~s-sP~v~~-g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~ 218 (599)
T 1w6s_A 141 GETVWKVENSDIKVGSTLTI-APYVVK-DKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNP 218 (599)
T ss_dssp CCEEEEEECCCGGGTCBCCS-CCEEET-TEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCG
T ss_pred CCEEEeecCCCCCccceeec-CCEEEC-CEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCccccccccccccccc
Confidence 998776543221 1110 000012 2445554 3799999999988876544321110
Q ss_pred -------------------------EEEEEcCCCCeEEEEecC----------------CcEEEEeCCCCceEEEecCCC
Q 019006 188 -------------------------TAVSFSDASDKIYTGGID----------------NDVKVWDLRKGEVSMTLQGHQ 226 (347)
Q Consensus 188 -------------------------~~~~~~~~~~~l~~~~~d----------------g~i~iwd~~~~~~~~~~~~~~ 226 (347)
...++++....++.++.+ +.|.-+|.++++....++...
T Consensus 219 ~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~ 298 (599)
T 1w6s_A 219 HYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTP 298 (599)
T ss_dssp GGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESST
T ss_pred cccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCC
Confidence 134566777788877655 379999999999887766432
Q ss_pred C----------ceeEEEEC-CCC---CEEEEEcCCCcEEEEeCCCCCCcCceeEEEeccc-----------cc--c----
Q 019006 227 D----------MITGMSLS-PDG---SYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQ-----------HN--F---- 275 (347)
Q Consensus 227 ~----------~i~~v~~~-~~~---~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~-----------~~--~---- 275 (347)
. ++. +... .+| ..++.++.+|.+.+.|.++.+.. ...+... .. +
T Consensus 299 ~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l----w~~~~~~~~~~~~~~~~~~g~p~~~~~ 373 (599)
T 1w6s_A 299 HDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALV----SANKLDDTVNVFKSVDLKTGQPVRDPE 373 (599)
T ss_dssp TCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTTCCEE----EEEESSTTCCSEEEECTTTCCEEECGG
T ss_pred CccccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCCCCEe----ecccccCCcccccccccCCCceeeccc
Confidence 1 111 2222 456 46777889999999998754321 1111000 00 0
Q ss_pred -------c-----------cceEEEEECCCCCEEEEe---------------------------------e------CCC
Q 019006 276 -------E-----------KNLLKCGWSPDGSKVTAG---------------------------------S------SDR 298 (347)
Q Consensus 276 -------~-----------~~~~~~~~s~~g~~l~sg---------------------------------s------~dg 298 (347)
. ..-..++++|+..++++. + .+|
T Consensus 374 ~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G 453 (599)
T 1w6s_A 374 YGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLG 453 (599)
T ss_dssp GCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCE
T ss_pred cCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceeccCCcCCcccCCCcC
Confidence 0 001134566666655442 1 357
Q ss_pred eEEEEeCCCceeeEEecCCccCeeeEEEcCCCCEEEEecCCCcEEeec
Q 019006 299 MVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGE 346 (347)
Q Consensus 299 ~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~i~~ 346 (347)
.|+-||+.+++.+.+.+. ..++..-.....+.++..++.|+.++.+|
T Consensus 454 ~l~A~D~~tG~~~W~~~~-~~~~~~g~~~tagg~vf~gt~dg~l~A~D 500 (599)
T 1w6s_A 454 QIKAYNAITGDYKWEKME-RFAVWGGTMATAGDLVFYGTLDGYLKARD 500 (599)
T ss_dssp EEEEECTTTCCEEEEEEE-SSCCCSBCEEETTTEEEEECTTSEEEEEE
T ss_pred eEEEEECCCCCEEeEecC-CCCccCcceEecCCEEEEECCCCeEEEEE
Confidence 899999999999887652 12222222333455666788899988876
No 258
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.77 E-value=4.5e-06 Score=77.40 Aligned_cols=252 Identities=10% Similarity=0.018 Sum_probs=142.2
Q ss_pred CCeEEEeeCCCcEEEEeccCCCeeeEEEe--Cccc--ceeEEEEcC--CCCEEEEecC------CCeEEEEECCCCceee
Q 019006 69 GTVIASGSHDRDIFLWHVHGDCKNFMVLK--GHKN--AILDLHWTT--DGSQIISASP------DKTLRAWDVETGKQIK 136 (347)
Q Consensus 69 ~~~l~s~~~d~~v~~w~~~~~~~~~~~~~--~h~~--~v~~~~~~~--~~~~l~s~~~------dg~i~iwd~~~~~~~~ 136 (347)
+..++.++.|+.++.+|.... +...... .+.. .+.+ +| .+..++.++. ++.|..+|..+++.+.
T Consensus 115 ~~~v~v~~~dg~l~alD~~tG-~~~W~~~~~~~~~~~~~~~---~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W 190 (571)
T 2ad6_A 115 AGQIVKKQANGHLLALDAKTG-KINWEVEVCDPKVGSTLTQ---APFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKW 190 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTC-CEEEEEECCCGGGTCBCCS---CCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEE
T ss_pred CCEEEEEeCCCEEEEEECCCC-CEEEEecCCCCCccceecc---CCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEE
Confidence 456777778888888887432 2222221 2111 1111 11 1345555544 7999999999999887
Q ss_pred eeeccCcce--------------------------------------eEeecCCCCCCEEEEEcCC--------------
Q 019006 137 KMAEHNSFV--------------------------------------NSCCPSRRGPPLVVSGSDD-------------- 164 (347)
Q Consensus 137 ~~~~~~~~v--------------------------------------~~~~~~~~~~~~~~s~~~d-------------- 164 (347)
++....... ...+..+.. .+++.++.+
T Consensus 191 ~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~-g~vy~~~g~~~~~~~~~~~gd~~ 269 (571)
T 2ad6_A 191 RAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKL-NLFYYGSGNPAPWNETMRPGDNK 269 (571)
T ss_dssp EEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTT-TEEEEECCCCSCSCGGGSCSCCT
T ss_pred EEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCC-CeEEEECCCCccccCCccCCCce
Confidence 664322110 001111222 244444422
Q ss_pred --CceEEEeCCCCCceeecCCC----------CceEEEEEcCCCC---eEEEEecCCcEEEEeCCCCceEEEecCCC---
Q 019006 165 --GTAKLWDMRQRGAIQTFPDK----------YQITAVSFSDASD---KIYTGGIDNDVKVWDLRKGEVSMTLQGHQ--- 226 (347)
Q Consensus 165 --~~i~iwd~~~~~~~~~~~~~----------~~v~~~~~~~~~~---~l~~~~~dg~i~iwd~~~~~~~~~~~~~~--- 226 (347)
+.|..+|.++++.+..++.. ....-+....+++ .++.++.+|.++++|..+++.+.......
T Consensus 270 y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~ 349 (571)
T 2ad6_A 270 WTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVN 349 (571)
T ss_dssp TTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCC
T ss_pred eEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCcc
Confidence 25888999988876554321 1111122223553 56778899999999999998776543211
Q ss_pred ----------Cce--------------------------eEEEECCCCCEEEEEc-------------------------
Q 019006 227 ----------DMI--------------------------TGMSLSPDGSYLLTNG------------------------- 245 (347)
Q Consensus 227 ----------~~i--------------------------~~v~~~~~~~~l~t~~------------------------- 245 (347)
.++ ..++++|+...++...
T Consensus 350 w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~ 429 (571)
T 2ad6_A 350 VFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATL 429 (571)
T ss_dssp SEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEE
T ss_pred ccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccc
Confidence 011 2357778777766653
Q ss_pred ------------CCCcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCCceeeEE
Q 019006 246 ------------MDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYK 313 (347)
Q Consensus 246 ------------~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~~~ 313 (347)
.++.|..||..+.+ ..-...... .+....+...+.+++.++.||.|+.||..+++++.+
T Consensus 430 ~~~~~~~~~~~~~~g~l~a~D~~tG~----~~W~~~~~~-----~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~ 500 (571)
T 2ad6_A 430 AMYPGPNGPTKKEMGQIRAFDLTTGK----AKWTKWEKF-----AAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWN 500 (571)
T ss_dssp EEEECTTSTTSCCCEEEEEECTTTCC----EEEEEEESS-----CCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred eeccCccccCCCCCCeEEEEECCCCC----EEEEecCCC-----CccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEE
Confidence 24678888876432 222221111 111111223567888899999999999999999988
Q ss_pred ecCCccC-eeeEEEcCCCCEEE
Q 019006 314 LPGHTGS-VNESVFHATEPVIG 334 (347)
Q Consensus 314 ~~~h~~~-v~~~~~~~~~~~l~ 334 (347)
++..... -.-+.+..++++++
T Consensus 501 ~~~~~~~~~~p~~~~~~G~~yv 522 (571)
T 2ad6_A 501 FKMPSGGIGSPMTYSFKGKQYI 522 (571)
T ss_dssp EECSSCCCSCCEEEEETTEEEE
T ss_pred EeCCCCcEeeeEEEEECCEEEE
Confidence 7644322 23344656666444
No 259
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.71 E-value=1.1e-05 Score=65.30 Aligned_cols=185 Identities=11% Similarity=0.116 Sum_probs=123.6
Q ss_pred ceeEEEEcCCCCEEEEecCCC--eEEEEECCCCceeeeeeccCcc-eeEeecCCCCCCEEEEEcCCCceEEEeCCCCCce
Q 019006 102 AILDLHWTTDGSQIISASPDK--TLRAWDVETGKQIKKMAEHNSF-VNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAI 178 (347)
Q Consensus 102 ~v~~~~~~~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~ 178 (347)
-...+.|++ +....+.+.+| .|+.+|+.+++.+..+...... -..+... +..+....-.++.+.++|..+.+.+
T Consensus 22 ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~--~~~ly~ltw~~~~v~v~D~~tl~~~ 98 (243)
T 3mbr_X 22 FTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW--RDRLIQLTWRNHEGFVYDLATLTPR 98 (243)
T ss_dssp CEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEESSSSEEEEEETTTTEEE
T ss_pred ccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEe--CCEEEEEEeeCCEEEEEECCcCcEE
Confidence 356788886 55566666654 8999999999988877544332 2223332 3456666778899999999999988
Q ss_pred eecCCCCceEEEEEcCCCCeEEEEecCCcEEEEeCCCCceEEEecCCC-----CceeEEEECCCCCEEEEEcCCCcEEEE
Q 019006 179 QTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQ-----DMITGMSLSPDGSYLLTNGMDCKLCIW 253 (347)
Q Consensus 179 ~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-----~~i~~v~~~~~~~~l~t~~~d~~i~~w 253 (347)
.+++....-..++ +++..|+.+..++.|.++|..+.+...++.-.. ..++.+.+. +|+..+..-.+..|.+.
T Consensus 99 ~ti~~~~~Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~vI 175 (243)
T 3mbr_X 99 ARFRYPGEGWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWLTSRIARI 175 (243)
T ss_dssp EEEECSSCCCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTTTEEEEE
T ss_pred EEEeCCCCceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEECCCCeEEEE
Confidence 8887654333444 456777777778899999999888776664321 345667765 56655555567789999
Q ss_pred eCCCCCCcCceeEEEeccc---------cccccceEEEEECCCCCEEEEeeC
Q 019006 254 DMRPYAPQNRCVKILEGHQ---------HNFEKNLLKCGWSPDGSKVTAGSS 296 (347)
Q Consensus 254 d~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~s~~g~~l~sgs~ 296 (347)
|..+ ++.+..+.... ....+....++|+|+++.|...+.
T Consensus 176 Dp~t----G~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 176 DPAS----GKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp CTTT----CBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred ECCC----CCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 9874 33444443211 112246788999998877766553
No 260
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.69 E-value=2.7e-05 Score=72.33 Aligned_cols=248 Identities=12% Similarity=0.041 Sum_probs=138.5
Q ss_pred EEEeeCCCcEEEEeccCCCeeeEEEe--Cccc--ceeE-EEEcCCCCEEEEec------CCCeEEEEECCCCceeeeeec
Q 019006 72 IASGSHDRDIFLWHVHGDCKNFMVLK--GHKN--AILD-LHWTTDGSQIISAS------PDKTLRAWDVETGKQIKKMAE 140 (347)
Q Consensus 72 l~s~~~d~~v~~w~~~~~~~~~~~~~--~h~~--~v~~-~~~~~~~~~l~s~~------~dg~i~iwd~~~~~~~~~~~~ 140 (347)
++.++.|+.++.+|.... +...... .+.. .+.+ -... ++ .++.++ .+|.|+.+|..+|+.+.++..
T Consensus 124 V~v~t~dg~l~AlDa~TG-~~~W~~~~~~~~~~~~~~ssP~v~-~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~ 200 (599)
T 1w6s_A 124 ILKTQLDGNVAALNAETG-ETVWKVENSDIKVGSTLTIAPYVV-KD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYA 200 (599)
T ss_dssp EEEECTTSEEEEEETTTC-CEEEEEECCCGGGTCBCCSCCEEE-TT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEES
T ss_pred EEEEcCCCEEEEEECCCC-CEEEeecCCCCCccceeecCCEEE-CC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcC
Confidence 777778888888887432 2222221 1110 1111 0111 33 555554 489999999999998876653
Q ss_pred cCcce-------------------------------------e-EeecCCCCCCEEEEEcCC----------------Cc
Q 019006 141 HNSFV-------------------------------------N-SCCPSRRGPPLVVSGSDD----------------GT 166 (347)
Q Consensus 141 ~~~~v-------------------------------------~-~~~~~~~~~~~~~s~~~d----------------~~ 166 (347)
..... . .....+. ..+++.++.+ +.
T Consensus 201 ~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~-~g~vy~g~g~~~p~~~~~r~gd~~y~~s 279 (599)
T 1w6s_A 201 TGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPG-TNLIYFGTGNPAPWNETMRPGDNKWTMT 279 (599)
T ss_dssp SSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETT-TTEEEEECCCCSCSCGGGSCSCCTTSSE
T ss_pred CCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCC-CCEEEEeCCCCccccCcccCCCccccce
Confidence 32110 0 0011112 2355555544 37
Q ss_pred eEEEeCCCCCceeecCCCC----------ceEEEEEc-CCC---CeEEEEecCCcEEEEeCCCCceEEEecCCC------
Q 019006 167 AKLWDMRQRGAIQTFPDKY----------QITAVSFS-DAS---DKIYTGGIDNDVKVWDLRKGEVSMTLQGHQ------ 226 (347)
Q Consensus 167 i~iwd~~~~~~~~~~~~~~----------~v~~~~~~-~~~---~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~------ 226 (347)
|..+|.++++.+..++... ...-+... .++ ..++.++.+|.++++|.++++.+.......
T Consensus 280 v~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~ 359 (599)
T 1w6s_A 280 IFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFK 359 (599)
T ss_dssp EEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEE
T ss_pred EEEEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCccccc
Confidence 8889999988765543210 11122222 456 457778899999999999998776543210
Q ss_pred -------Cce--------------------------eEEEECCCCCEEEEEc----------------------------
Q 019006 227 -------DMI--------------------------TGMSLSPDGSYLLTNG---------------------------- 245 (347)
Q Consensus 227 -------~~i--------------------------~~v~~~~~~~~l~t~~---------------------------- 245 (347)
.++ ..++++|+...+++..
T Consensus 360 ~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~ 439 (599)
T 1w6s_A 360 SVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMY 439 (599)
T ss_dssp EECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEE
T ss_pred ccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceec
Confidence 011 2456777666655432
Q ss_pred -----------CCCcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCCceeeEEe
Q 019006 246 -----------MDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKL 314 (347)
Q Consensus 246 -----------~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~~~~ 314 (347)
.+|.|.-||+.+.+. +-..+... ....-.....+.+++.|+.||.++.||.++++++.++
T Consensus 440 ~~p~~~~~~~~~~G~l~A~D~~tG~~----~W~~~~~~-----~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~ 510 (599)
T 1w6s_A 440 PGPKGDRQNYEGLGQIKAYNAITGDY----KWEKMERF-----AVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKF 510 (599)
T ss_dssp ECTTSBTTTTBCCEEEEEECTTTCCE----EEEEEESS-----CCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred cCCcCCcccCCCcCeEEEEECCCCCE----EeEecCCC-----CccCcceEecCCEEEEECCCCeEEEEECCCCCEEEEe
Confidence 235666677654321 11111000 0111111235778888999999999999999999887
Q ss_pred cCCccCe-eeEEEcCCCCE
Q 019006 315 PGHTGSV-NESVFHATEPV 332 (347)
Q Consensus 315 ~~h~~~v-~~~~~~~~~~~ 332 (347)
+-..+.+ .-+.|..++++
T Consensus 511 ~l~~g~~~~P~~y~~~G~q 529 (599)
T 1w6s_A 511 KIPSGAIGYPMTYTHKGTQ 529 (599)
T ss_dssp ECSSCCCSCCEEEEETTEE
T ss_pred eCCCCcEeccEEEEeCCEE
Confidence 6443322 34556666653
No 261
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.68 E-value=8.4e-05 Score=63.11 Aligned_cols=221 Identities=11% Similarity=0.059 Sum_probs=126.8
Q ss_pred ceeEEEEcCCCCEEEEecCCCeEEEEECCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCC--ceEEEeCCCCCcee
Q 019006 102 AILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDG--TAKLWDMRQRGAIQ 179 (347)
Q Consensus 102 ~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~--~i~iwd~~~~~~~~ 179 (347)
....++|+++++.+++-..++.|..||.... ....+ ........+++.+++. ++++..... .|..+|..++....
T Consensus 33 ~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~-~~~~~p~gia~~~dG~-l~vad~~~~~~~v~~~d~~~g~~~~ 109 (306)
T 2p4o_A 33 FLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHA-TVEGKVSGLAFTSNGD-LVATGWNADSIPVVSLVKSDGTVET 109 (306)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEE-ECSSEEEEEEECTTSC-EEEEEECTTSCEEEEEECTTSCEEE
T ss_pred CcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEE-eCCCCceeEEEcCCCc-EEEEeccCCcceEEEEcCCCCeEEE
Confidence 4568889999887777768889999987653 22222 2233455566666654 555543322 36666766655432
Q ss_pred e--cCCCCceEEEEEcCCCCeEEEEecCCcEEEEeCCCCce-EEEec---------CCCCceeEEEECCCCCEEEE-EcC
Q 019006 180 T--FPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEV-SMTLQ---------GHQDMITGMSLSPDGSYLLT-NGM 246 (347)
Q Consensus 180 ~--~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~-~~~~~---------~~~~~i~~v~~~~~~~~l~t-~~~ 246 (347)
. .+.......++..+.+..+++-..++.|+.+|...++. ..... ..-...+.+ ++++++|+. -..
T Consensus 110 ~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~ 187 (306)
T 2p4o_A 110 LLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTE 187 (306)
T ss_dssp EEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETT
T ss_pred EEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCC
Confidence 2 22222234455554443344444688999999875432 11110 111234555 778876654 456
Q ss_pred CCcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCCcee--eEEecCCccCeeeE
Q 019006 247 DCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRI--LYKLPGHTGSVNES 324 (347)
Q Consensus 247 d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~--~~~~~~h~~~v~~~ 324 (347)
.+.|..+|+...... .....+... .....++++++|.+.++....+.|.++|.. ++. +..+...-....++
T Consensus 188 ~~~I~~~~~~~~g~~-~~~~~~~~~-----~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~~~~~p~~~ 260 (306)
T 2p4o_A 188 KMLLLRIPVDSTDKP-GEPEIFVEQ-----TNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQGVIGSTAV 260 (306)
T ss_dssp TTEEEEEEBCTTSCB-CCCEEEEES-----CCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGGGTCTTEEEE
T ss_pred CCEEEEEEeCCCCCC-CccEEEecc-----CCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeecccccCCceEE
Confidence 679999998631100 011111110 123456788999988887778899999976 554 22343333568899
Q ss_pred EEc---CCCCEEE
Q 019006 325 VFH---ATEPVIG 334 (347)
Q Consensus 325 ~~~---~~~~~l~ 334 (347)
+|. |++..|.
T Consensus 261 a~~g~~~d~~~Ly 273 (306)
T 2p4o_A 261 AFGQTEGDCTAIY 273 (306)
T ss_dssp EECCSTTTTTEEE
T ss_pred EEecccCCCCEEE
Confidence 998 7865444
No 262
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.65 E-value=0.00018 Score=63.21 Aligned_cols=238 Identities=7% Similarity=-0.041 Sum_probs=140.4
Q ss_pred CCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEE-EecCCCeEEEEECCCCceeeeeeccCcceeEeecCCCCCC
Q 019006 78 DRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQII-SASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPP 156 (347)
Q Consensus 78 d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 156 (347)
...|+..++.+... ..+.........++|++.+..|+ +-...+.|..++.........+.........++..+.+..
T Consensus 95 ~~~I~~i~~~~~~~--~~~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ 172 (386)
T 3v65_B 95 RIDIRQVLPHRSEY--TLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDK 172 (386)
T ss_dssp BSCEEEECTTSCCC--EEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTE
T ss_pred CccceeeccCCCcE--EEEecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCe
Confidence 35677777754322 22222334578999997655555 5456788999998765432222222222333455555556
Q ss_pred EEEEEcCCCceEEEeCCCCCceeecCC-CCceEEEEEcCCCCeEEEEec-C-CcEEEEeCCCCceEEEecCCCCceeEEE
Q 019006 157 LVVSGSDDGTAKLWDMRQRGAIQTFPD-KYQITAVSFSDASDKIYTGGI-D-NDVKVWDLRKGEVSMTLQGHQDMITGMS 233 (347)
Q Consensus 157 ~~~s~~~d~~i~iwd~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~-d-g~i~iwd~~~~~~~~~~~~~~~~i~~v~ 233 (347)
++++-...+.|.+.++........+.. ......++++|.+..|+.... . +.|+.+++............-...+.|+
T Consensus 173 lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla 252 (386)
T 3v65_B 173 LYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLT 252 (386)
T ss_dssp EEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEE
T ss_pred EEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEE
Confidence 777777778888888765443333332 246788999988777765543 3 6788888864433333322233468999
Q ss_pred ECCCCCEEEEE-cCCCcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCCceeeE
Q 019006 234 LSPDGSYLLTN-GMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILY 312 (347)
Q Consensus 234 ~~~~~~~l~t~-~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~~ 312 (347)
|+|++..|..+ ...+.|..+|+... .+ ...+... ......+++ ..+.+..+-...+.|..++..+++.+.
T Consensus 253 vd~~~~~lY~aD~~~~~I~~~d~dG~---~~-~~~~~~~----~~~P~giav-~~~~ly~td~~~~~V~~~~~~~G~~~~ 323 (386)
T 3v65_B 253 IDYAGRRMYWVDAKHHVIERANLDGS---HR-KAVISQG----LPHPFAITV-FEDSLYWTDWHTKSINSANKFTGKNQE 323 (386)
T ss_dssp EEGGGTEEEEEETTTTEEEEECTTSC---SC-EEEECSS----CSSEEEEEE-ETTEEEEEETTTTEEEEEETTTCCSCE
T ss_pred EeCCCCEEEEEECCCCEEEEEeCCCC---ee-EEEEECC----CCCceEEEE-ECCEEEEeeCCCCeEEEEECCCCcceE
Confidence 99876655544 55678999987531 11 1111111 123455666 344555666677889999977777666
Q ss_pred EecCCccCeeeEEE
Q 019006 313 KLPGHTGSVNESVF 326 (347)
Q Consensus 313 ~~~~h~~~v~~~~~ 326 (347)
.+...-.....+++
T Consensus 324 ~i~~~~~~p~gi~v 337 (386)
T 3v65_B 324 IIRNKLHFPMDIHT 337 (386)
T ss_dssp EEECSCSCCCCEEE
T ss_pred EEccCCCCCceEEE
Confidence 66544334445544
No 263
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.63 E-value=0.00019 Score=62.17 Aligned_cols=253 Identities=7% Similarity=-0.021 Sum_probs=144.9
Q ss_pred EEEEECCCCCeEEEeeCCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEE-EecCCCeEEEEECCCCceeeeee
Q 019006 61 YTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQII-SASPDKTLRAWDVETGKQIKKMA 139 (347)
Q Consensus 61 ~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-s~~~dg~i~iwd~~~~~~~~~~~ 139 (347)
.|.+..+++.++++ ....|+..++.+.. ...+.........++|++.+..|+ +-...+.|..+++........+.
T Consensus 37 ~C~~~~~~~~ll~~--~~~~I~~i~~~g~~--~~~~~~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~ 112 (349)
T 3v64_C 37 SCKALGPEPVLLFA--NRIDIRQVLPHRSE--YTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVS 112 (349)
T ss_dssp CEEESSSCCEEEEE--CBSCEEEECTTSCC--EEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC
T ss_pred cccccccCceeEee--cccceEEEeCCCCe--eEEeecCCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEe
Confidence 34444453333433 23457777775432 222222234578999997666555 44567889999987654322222
Q ss_pred ccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeecC-CCCceEEEEEcCCCCeEEEEe-cC-CcEEEEeCCCC
Q 019006 140 EHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFP-DKYQITAVSFSDASDKIYTGG-ID-NDVKVWDLRKG 216 (347)
Q Consensus 140 ~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~-~d-g~i~iwd~~~~ 216 (347)
........++..+.+..++++-...+.|.+.++.......... .......++++|.+..++... .. +.|..+++...
T Consensus 113 ~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~ 192 (349)
T 3v64_C 113 TGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGS 192 (349)
T ss_dssp SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC
T ss_pred CCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCC
Confidence 2222334455555556677777777889999887554333332 234678899999777666554 33 77888887643
Q ss_pred ceEEEecCCCCceeEEEECCCCCEEEEE-cCCCcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEEEEee
Q 019006 217 EVSMTLQGHQDMITGMSLSPDGSYLLTN-GMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGS 295 (347)
Q Consensus 217 ~~~~~~~~~~~~i~~v~~~~~~~~l~t~-~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs 295 (347)
.........-...+.++++|++..|..+ ...+.|..+|+... .+ ...+... ......+++ ..+....+-.
T Consensus 193 ~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~---~~-~~~~~~~----~~~P~giav-~~~~ly~td~ 263 (349)
T 3v64_C 193 GRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGS---HR-KAVISQG----LPHPFAITV-FEDSLYWTDW 263 (349)
T ss_dssp SCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC---SC-EEEECSS----CSSEEEEEE-ETTEEEEEET
T ss_pred CcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCC---ce-EEEEeCC----CCCceEEEE-ECCEEEEecC
Confidence 3222222223346889999876665554 45678999987531 11 1111111 123455566 3445555666
Q ss_pred CCCeEEEEeCCCceeeEEecCCccCeeeEEE
Q 019006 296 SDRMVYIWDTTSRRILYKLPGHTGSVNESVF 326 (347)
Q Consensus 296 ~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~ 326 (347)
..+.|..++..+++.+..+...-.....+++
T Consensus 264 ~~~~V~~~~~~~G~~~~~i~~~~~~p~gi~v 294 (349)
T 3v64_C 264 HTKSINSANKFTGKNQEIIRNKLHFPMDIHT 294 (349)
T ss_dssp TTTEEEEEETTTCCSCEEEECSCSCCCCEEE
T ss_pred CCCeEEEEEccCCCccEEeccCCCCCceEEE
Confidence 7788999987677665555433333444443
No 264
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.58 E-value=3.7e-05 Score=71.37 Aligned_cols=160 Identities=13% Similarity=0.072 Sum_probs=97.1
Q ss_pred CceEEEeCCCCCceeecCC---C-------CceEEEEEc-CCCC---eEEEEecCCcEEEEeCCCCceEEEecCCC----
Q 019006 165 GTAKLWDMRQRGAIQTFPD---K-------YQITAVSFS-DASD---KIYTGGIDNDVKVWDLRKGEVSMTLQGHQ---- 226 (347)
Q Consensus 165 ~~i~iwd~~~~~~~~~~~~---~-------~~v~~~~~~-~~~~---~l~~~~~dg~i~iwd~~~~~~~~~~~~~~---- 226 (347)
+.|..+|.++++.+..++. . ....-+... .+++ .++.++.+|.++++|.++++.+.......
T Consensus 291 ~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~ 370 (582)
T 1flg_A 291 SGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITW 370 (582)
T ss_dssp SEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCCS
T ss_pred ceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCccc
Confidence 5789999999887766532 1 011112222 3553 67789999999999999998776543321
Q ss_pred ---------Cc--------------------------------eeEEEECCCCCEEEEEc--------------------
Q 019006 227 ---------DM--------------------------------ITGMSLSPDGSYLLTNG-------------------- 245 (347)
Q Consensus 227 ---------~~--------------------------------i~~v~~~~~~~~l~t~~-------------------- 245 (347)
.+ -..++++|+...+++..
T Consensus 371 ~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~ 450 (582)
T 1flg_A 371 ASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAY 450 (582)
T ss_dssp EEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCC
T ss_pred cccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCce
Confidence 00 01346666655554432
Q ss_pred -------------CCCcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCCceeeE
Q 019006 246 -------------MDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILY 312 (347)
Q Consensus 246 -------------~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~~ 312 (347)
.+|.|.-||+.+.+. +-..+......... ....+.+++.|+.||.++.||.++++++.
T Consensus 451 ~g~~~~~~p~~~~~~G~l~A~D~~tG~~----~W~~~~~~~~~~g~-----~~tagglvf~g~~dg~l~A~D~~tG~~lW 521 (582)
T 1flg_A 451 LGMGFRIKRMYDDHVGSLRAMDPVSGKV----VWEHKEHLPLWAGV-----LATAGNLVFTGTGDGYFKAFDAKSGKELW 521 (582)
T ss_dssp CCEEEEEEESCSSCSEEEEEECTTTCCE----EEEEEESSCCCSCC-----EEETTTEEEEECTTSEEEEEETTTCCEEE
T ss_pred eccceeecCCCCCCcceEEEEECCCCCE----EEEecCCCCCcccc-----eEeCCCEEEEECCCCcEEEEECCCCCEEE
Confidence 256788888765432 21121111111111 12246788889999999999999999999
Q ss_pred EecCCccCe-eeEEEcCCCCEE
Q 019006 313 KLPGHTGSV-NESVFHATEPVI 333 (347)
Q Consensus 313 ~~~~h~~~v-~~~~~~~~~~~l 333 (347)
+++...+.. .-+.|..++++.
T Consensus 522 ~~~~~~g~~a~P~~y~~~G~qY 543 (582)
T 1flg_A 522 KFQTGSGIVSPPITWEQDGEQY 543 (582)
T ss_dssp EEECSSCCCSCCEEEEETTEEE
T ss_pred EecCCCCcccCceEEEECCEEE
Confidence 887654332 346676777633
No 265
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.57 E-value=0.00045 Score=66.68 Aligned_cols=263 Identities=10% Similarity=0.066 Sum_probs=155.7
Q ss_pred cccEEEEEECCCCCeEEEeeCCCcEEEEeccCCCeeeEEEe----------CcccceeEEEEcCCCCEEEEecCCCeEEE
Q 019006 57 QSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLK----------GHKNAILDLHWTTDGSQIISASPDKTLRA 126 (347)
Q Consensus 57 ~~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~----------~h~~~v~~~~~~~~~~~l~s~~~dg~i~i 126 (347)
...|.++...++|.+ -.|..++-|..++..... +..+. .....|.++...++|... .|..++-+..
T Consensus 312 ~~~v~~i~~D~~g~l-Wigt~~~Gl~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lW-igt~~~Gl~~ 387 (781)
T 3v9f_A 312 NASARYIFQDSFNNI-WIGTWGGGINFISNAPPT--FHTWSYSPTQMNESSLSNKVVSSVCDDGQGKLW-IGTDGGGINV 387 (781)
T ss_dssp SSCEEEEEECSSCCE-EEEEBSSCEEEECSSCCS--CEEEC----CCCSSCCSSSCEEEEEECTTSCEE-EEEBSSCEEE
T ss_pred CCeEEEEEEeCCCCE-EEEecCCeEEEeCCCCCc--ceeeccCccccccCCCCCcceEEEEEcCCCCEE-EEeCCCcEEE
Confidence 456899988888764 456666678888764322 22221 023468899888877654 4554555888
Q ss_pred EECCCCceeeee---eccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeecC----CCCceEEEEEcCCCCeE
Q 019006 127 WDVETGKQIKKM---AEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFP----DKYQITAVSFSDASDKI 199 (347)
Q Consensus 127 wd~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~----~~~~v~~~~~~~~~~~l 199 (347)
|+..++...... ......|.++.....+ . +..|+.++-+..+|..+++.. .+. ....|.++..++++ .+
T Consensus 388 ~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g-~-lWigt~~~Gl~~~~~~~~~~~-~~~~~~~~~~~v~~i~~d~~g-~l 463 (781)
T 3v9f_A 388 FENGKRVAIYNKENRELLSNSVLCSLKDSEG-N-LWFGTYLGNISYYNTRLKKFQ-IIELEKNELLDVRVFYEDKNK-KI 463 (781)
T ss_dssp EETTEEEEECC-----CCCSBEEEEEECTTS-C-EEEEETTEEEEEECSSSCEEE-ECCSTTTCCCCEEEEEECTTS-EE
T ss_pred EECCCCeEEEccCCCCCCCcceEEEEECCCC-C-EEEEeccCCEEEEcCCCCcEE-EeccCCCCCCeEEEEEECCCC-CE
Confidence 887654322110 1122445555554443 3 455777667888887665432 222 23468888887765 46
Q ss_pred EEEecCCcEEEEeCCCCceEEEecCC-----CCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEeccccc
Q 019006 200 YTGGIDNDVKVWDLRKGEVSMTLQGH-----QDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHN 274 (347)
Q Consensus 200 ~~~~~dg~i~iwd~~~~~~~~~~~~~-----~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~ 274 (347)
..|+. +.|..||..+++........ ...|.++...++|+..+....+ .+..+|.... ....+......
T Consensus 464 wigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~-Gl~~~~~~~~-----~~~~~~~~~~l 536 (781)
T 3v9f_A 464 WIGTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGG-GVGIYTPDMQ-----LVRKFNQYEGF 536 (781)
T ss_dssp EEEET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSS-CEEEECTTCC-----EEEEECTTTTC
T ss_pred EEEEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCC-CEEEEeCCCC-----eEEEccCCCCC
Confidence 66666 56899998776543322211 3568899998888765554334 4777876421 12223221111
Q ss_pred cccceEEEEECCCCCEEEEeeCCCeEEEEeCCCceeeEEecCC----ccCeeeEEEcCCCCEEEEe
Q 019006 275 FEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGH----TGSVNESVFHATEPVIGSC 336 (347)
Q Consensus 275 ~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~~~~~~h----~~~v~~~~~~~~~~~l~s~ 336 (347)
....+.++...++|.+.++.. +|.|..||..+++.. .+... ...|..+...+++.+.+++
T Consensus 537 ~~~~i~~i~~d~~g~lWi~T~-~Glv~~~d~~~~~~~-~~~~~~gl~~~~i~~i~~d~~g~lW~~t 600 (781)
T 3v9f_A 537 CSNTINQIYRSSKGQMWLATG-EGLVCFPSARNFDYQ-VFQRKEGLPNTHIRAISEDKNGNIWAST 600 (781)
T ss_dssp SCSCEEEEEECTTSCEEEEET-TEEEEESCTTTCCCE-EECGGGTCSCCCCCEEEECSSSCEEEEC
T ss_pred CCCeeEEEEECCCCCEEEEEC-CCceEEECCCCCcEE-EccccCCCCCceEEEEEECCCCCEEEEc
Confidence 234678888888888666544 666599998776543 22211 2357788888777765554
No 266
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.57 E-value=9.5e-05 Score=68.67 Aligned_cols=230 Identities=16% Similarity=0.110 Sum_probs=136.7
Q ss_pred CCEEEEecCCCeEEEEECCCCceeeeeeccCc----cee---EeecC-CCCCCEEEEEc------CCCceEEEeCCCCCc
Q 019006 112 GSQIISASPDKTLRAWDVETGKQIKKMAEHNS----FVN---SCCPS-RRGPPLVVSGS------DDGTAKLWDMRQRGA 177 (347)
Q Consensus 112 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~----~v~---~~~~~-~~~~~~~~s~~------~d~~i~iwd~~~~~~ 177 (347)
+..++.++.|+.+..+|..+|+.+.+...... .+. .+.-. ..+...++.++ .++.+..+|.++++.
T Consensus 117 ~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~ 196 (582)
T 1flg_A 117 GDKVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEE 196 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCE
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCE
Confidence 56788888999999999999998776543321 010 01111 01111555554 378999999988876
Q ss_pred eeecCCCC------------------------------------------ceEEEEEcCCCCeEEEEec-----------
Q 019006 178 IQTFPDKY------------------------------------------QITAVSFSDASDKIYTGGI----------- 204 (347)
Q Consensus 178 ~~~~~~~~------------------------------------------~v~~~~~~~~~~~l~~~~~----------- 204 (347)
+...+... .-..+++++....++.++.
T Consensus 197 ~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~ 276 (582)
T 1flg_A 197 IWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWART 276 (582)
T ss_dssp EEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGS
T ss_pred EeecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccc
Confidence 65432210 0123456677777776653
Q ss_pred ---------C----CcEEEEeCCCCceEEEecC--CCC----ceeE-EEEC---CCCC---EEEEEcCCCcEEEEeCCCC
Q 019006 205 ---------D----NDVKVWDLRKGEVSMTLQG--HQD----MITG-MSLS---PDGS---YLLTNGMDCKLCIWDMRPY 258 (347)
Q Consensus 205 ---------d----g~i~iwd~~~~~~~~~~~~--~~~----~i~~-v~~~---~~~~---~l~t~~~d~~i~~wd~~~~ 258 (347)
| +.|.-+|.++++.+..++. |.. .+.. +.+. .+|+ .++.++.+|.+.++|..+.
T Consensus 277 ~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG 356 (582)
T 1flg_A 277 AKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSNG 356 (582)
T ss_dssp CTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTTC
T ss_pred cCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEECCCC
Confidence 2 5799999999998887753 211 1111 1122 4564 7888899999999998754
Q ss_pred CCcCceeEEEeccc---------------------c---------ccccc-----------eEEEEECCCCCEEEEee--
Q 019006 259 APQNRCVKILEGHQ---------------------H---------NFEKN-----------LLKCGWSPDGSKVTAGS-- 295 (347)
Q Consensus 259 ~~~~~~~~~~~~~~---------------------~---------~~~~~-----------~~~~~~s~~g~~l~sgs-- 295 (347)
+.. ....... . ..... -..++++|+..++++..
T Consensus 357 ~~l----w~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~ 432 (582)
T 1flg_A 357 KLQ----NAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANH 432 (582)
T ss_dssp CEE----EEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEEC
T ss_pred CEe----cccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechh
Confidence 321 1111100 0 00000 01345677665555432
Q ss_pred -------------------------------CCCeEEEEeCCCceeeEEecCCccCeeeEEEcCCCCEEEEecCCCcEEe
Q 019006 296 -------------------------------SDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYL 344 (347)
Q Consensus 296 -------------------------------~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~i 344 (347)
.+|.|+-||+.+++.+.+.+.+. .+..-.....+.++..++.|+.++.
T Consensus 433 ~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~g~~dg~l~A 511 (582)
T 1flg_A 433 WKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHL-PLWAGVLATAGNLVFTGTGDGYFKA 511 (582)
T ss_dssp EEEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESS-CCCSCCEEETTTEEEEECTTSEEEE
T ss_pred cceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCC-CCcccceEeCCCEEEEECCCCcEEE
Confidence 36889999999999988776432 2322222234567777889999988
Q ss_pred ec
Q 019006 345 GE 346 (347)
Q Consensus 345 ~~ 346 (347)
+|
T Consensus 512 ~D 513 (582)
T 1flg_A 512 FD 513 (582)
T ss_dssp EE
T ss_pred EE
Confidence 77
No 267
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.52 E-value=0.00093 Score=64.47 Aligned_cols=268 Identities=10% Similarity=0.062 Sum_probs=154.3
Q ss_pred ccEEEEEECCCCCeEEEeeCCCcEEEEeccCCCee-eEEE-----eCcccceeEEEEcCCCCEEEEecCCCeEEEEECCC
Q 019006 58 SAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKN-FMVL-----KGHKNAILDLHWTTDGSQIISASPDKTLRAWDVET 131 (347)
Q Consensus 58 ~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~-~~~~-----~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 131 (347)
..|.++...++|.+.+. ..+ -+.+|+....... +... ......|.++...++|.+.+ |...+-|.++|..+
T Consensus 211 ~~i~~i~~d~~g~lwig-t~~-Gl~~~d~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~~Gl~~~~~~~ 287 (781)
T 3v9f_A 211 NDVRCIYKDTNGNIWIG-TSK-GLALFNANTETFTNFHNNPGNIHGALSSYIFSIKQLKDNKLWI-ATELNGIMILDLQQ 287 (781)
T ss_dssp SSEEEEEECTTCCEEEE-ETT-EEEEEETTTTEEEC-----------CCCCEEEEEECTTSEEEE-EESSSCEEEEETTC
T ss_pred CceeEEEEcCCCCEEEE-eCC-cHheECCCCCcEEEEEcCCCccccccCceEEEEEECCCCCEEE-EeCCCCeEEECCCC
Confidence 45888888888876654 344 5788886432111 1100 01235688998888876554 55534577888766
Q ss_pred Cceeeeee--------------ccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeec-------C---CCCce
Q 019006 132 GKQIKKMA--------------EHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTF-------P---DKYQI 187 (347)
Q Consensus 132 ~~~~~~~~--------------~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~-------~---~~~~v 187 (347)
.+...... .....|.++.....+ .+..|+.++-|..++.......... . ....|
T Consensus 288 ~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g--~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v 365 (781)
T 3v9f_A 288 NQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFN--NIWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVV 365 (781)
T ss_dssp C---------CEEECBCSSTTSBSSSCEEEEEECSSC--CEEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCE
T ss_pred CeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCC--CEEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcce
Confidence 54221110 122345555555443 3666777777888887654432211 1 12358
Q ss_pred EEEEEcCCCCeEEEEecCCcEEEEeCCCCceEEEe---cCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCce
Q 019006 188 TAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTL---QGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRC 264 (347)
Q Consensus 188 ~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~---~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~ 264 (347)
.++..++++ .+..|+.++-|..||..++....-. ......|.++...++++..+ |..++.+..+|.... +
T Consensus 366 ~~i~~d~~g-~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~----~- 438 (781)
T 3v9f_A 366 SSVCDDGQG-KLWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWF-GTYLGNISYYNTRLK----K- 438 (781)
T ss_dssp EEEEECTTS-CEEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEE-EETTEEEEEECSSSC----E-
T ss_pred EEEEEcCCC-CEEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEE-EeccCCEEEEcCCCC----c-
Confidence 888887665 5677887777999997654322111 11235688898887776554 565667888886531 1
Q ss_pred eEEEeccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCCceeeEEecCC-----ccCeeeEEEcCCCCEEEEecCC
Q 019006 265 VKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGH-----TGSVNESVFHATEPVIGSCSSD 339 (347)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~~~~~~h-----~~~v~~~~~~~~~~~l~s~s~D 339 (347)
...+... ......+.++...++|.+.+ |+. +-|..||..+++........ ...|.++...+++.+.+.+..+
T Consensus 439 ~~~~~~~-~~~~~~v~~i~~d~~g~lwi-gt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~ 515 (781)
T 3v9f_A 439 FQIIELE-KNELLDVRVFYEDKNKKIWI-GTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGG 515 (781)
T ss_dssp EEECCST-TTCCCCEEEEEECTTSEEEE-EET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSS
T ss_pred EEEeccC-CCCCCeEEEEEECCCCCEEE-EEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCC
Confidence 1222110 11124577887788876555 444 46999998876654322211 3568888888888766554434
Q ss_pred C
Q 019006 340 K 340 (347)
Q Consensus 340 ~ 340 (347)
|
T Consensus 516 G 516 (781)
T 3v9f_A 516 G 516 (781)
T ss_dssp C
T ss_pred C
Confidence 4
No 268
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.50 E-value=7.8e-05 Score=66.56 Aligned_cols=240 Identities=9% Similarity=0.048 Sum_probs=131.4
Q ss_pred eeEEEEcC-CCCEEEEecCCCeEEEEECCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCCc----eEEEeCCCCCc
Q 019006 103 ILDLHWTT-DGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGT----AKLWDMRQRGA 177 (347)
Q Consensus 103 v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~----i~iwd~~~~~~ 177 (347)
...|+++| ++..|+.+...+.|+.+|+..+.. ..+.........+++.+.+..++++...++. +..++.. +..
T Consensus 139 P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v-~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~-g~~ 216 (430)
T 3tc9_A 139 AVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYV-STVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRE-SGF 216 (430)
T ss_dssp CCEEEEETTEEEEEEEEEBTEEEEEEETTTTEE-EEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGG-GTS
T ss_pred CCEEEECCCCCCeEEEEeCCCcEEEEECCCCEE-EEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCC-Cce
Confidence 46889998 455666665558899999876553 3333333445567777766546666543332 3333332 221
Q ss_pred e--eecCCCCceEEEEEcC-CCCeEEEEecCCcEEEEeCCCCceEEEec-CCCCceeEEEECCCCCEEE-EEcCCCcEEE
Q 019006 178 I--QTFPDKYQITAVSFSD-ASDKIYTGGIDNDVKVWDLRKGEVSMTLQ-GHQDMITGMSLSPDGSYLL-TNGMDCKLCI 252 (347)
Q Consensus 178 ~--~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~~i~~v~~~~~~~~l~-t~~~d~~i~~ 252 (347)
. ..+........++++| ++..+++-..++.|+.|+...+....... ........++|+|++++|+ +-...+.|..
T Consensus 217 ~~~~~l~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~ 296 (430)
T 3tc9_A 217 KVITELTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILR 296 (430)
T ss_dssp CSEEEEEECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEE
T ss_pred eeeeeeccCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEE
Confidence 1 2222223456788999 45545555567889999987665422211 1123467899999999554 4456778999
Q ss_pred EeCCCCCCcCceeEEEecc------c------cccccceE-EEEEC--------CCCCEEEEeeCCCeEEEEeCCCceee
Q 019006 253 WDMRPYAPQNRCVKILEGH------Q------HNFEKNLL-KCGWS--------PDGSKVTAGSSDRMVYIWDTTSRRIL 311 (347)
Q Consensus 253 wd~~~~~~~~~~~~~~~~~------~------~~~~~~~~-~~~~s--------~~g~~l~sgs~dg~i~vwd~~~~~~~ 311 (347)
++.............+.+. . ..+. ... .++.. ++|.+.++=...+.|+.++. .+...
T Consensus 297 ~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~-~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~~-~G~v~ 374 (430)
T 3tc9_A 297 SDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMH-APRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILTP-QGRVT 374 (430)
T ss_dssp EEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBS-SEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEECT-TSEEE
T ss_pred EeCCcccccccceEEEeccCCCCCCCCCCCcceEeC-CCcceEEEccccccccCCCCeEEEEECCCcEEEEECC-CCcEE
Confidence 8765211000001111111 0 0011 122 33332 34566666666778888884 45433
Q ss_pred EEecC----C----c---------cCeeeEEEcC-CCCEEEEecCCCcEEeec
Q 019006 312 YKLPG----H----T---------GSVNESVFHA-TEPVIGSCSSDKQIYLGE 346 (347)
Q Consensus 312 ~~~~~----h----~---------~~v~~~~~~~-~~~~l~s~s~D~~i~i~~ 346 (347)
..... . . .....+++.| ++.++++-..++.|+..+
T Consensus 375 ~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~ 427 (430)
T 3tc9_A 375 TFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIG 427 (430)
T ss_dssp EEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEE
T ss_pred EEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEc
Confidence 22210 0 1 1467899998 466666666667776543
No 269
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.45 E-value=0.00031 Score=62.76 Aligned_cols=240 Identities=9% Similarity=0.023 Sum_probs=133.1
Q ss_pred eeEEEEcCC--CCEEEEecCCCeEEEEECCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCC---Cc-eEEEeCCCCC
Q 019006 103 ILDLHWTTD--GSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDD---GT-AKLWDMRQRG 176 (347)
Q Consensus 103 v~~~~~~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d---~~-i~iwd~~~~~ 176 (347)
...|+|+|+ +..|+.+...+.|+.+|..+++.. .+.........+++.+.+. ++++-... .. +...+.....
T Consensus 141 P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~-~~~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~~~ 218 (433)
T 4hw6_A 141 IWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVD-IKTTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRASGF 218 (433)
T ss_dssp CCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEE-EECCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGGTT
T ss_pred CceEEEccccCCCEEEEEeCCCCEEEEECCCCEEE-EeecCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCCCe
Confidence 568999984 445555544488999998776543 3333334455677777665 65554322 11 2222221111
Q ss_pred c-eeecCCCCceEEEEEcCCCCeEE-EEecCCcEEEEeCCCCceEEEec--CCCCceeEEEECCCCCEEE-EEcCCCcEE
Q 019006 177 A-IQTFPDKYQITAVSFSDASDKIY-TGGIDNDVKVWDLRKGEVSMTLQ--GHQDMITGMSLSPDGSYLL-TNGMDCKLC 251 (347)
Q Consensus 177 ~-~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~--~~~~~i~~v~~~~~~~~l~-t~~~d~~i~ 251 (347)
. ...+........+++++....|+ +-..++.|+.+|..++.....+. +....-..++|+|++++|+ +-...+.|.
T Consensus 219 ~~~~~~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~ 298 (433)
T 4hw6_A 219 TERLSLCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIY 298 (433)
T ss_dssp CCEEEEEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEE
T ss_pred eccccccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEE
Confidence 0 01111223356678898444455 44567789999988676522221 1112234699999999554 445567899
Q ss_pred EEeCCCCCCcCceeEEEecc--ccc---------cccceEEEEE---------CCCCCEEEEeeCCCeEEEEeCCCceee
Q 019006 252 IWDMRPYAPQNRCVKILEGH--QHN---------FEKNLLKCGW---------SPDGSKVTAGSSDRMVYIWDTTSRRIL 311 (347)
Q Consensus 252 ~wd~~~~~~~~~~~~~~~~~--~~~---------~~~~~~~~~~---------s~~g~~l~sgs~dg~i~vwd~~~~~~~ 311 (347)
.++.............+.+. ... .-.....+++ .++|.+.++-...+.|+.++. ++.+.
T Consensus 299 ~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G~v~ 377 (433)
T 4hw6_A 299 RVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-EGRVT 377 (433)
T ss_dssp EEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-TSEEE
T ss_pred EEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-CCCEE
Confidence 98865211100001111111 000 0123566788 777777777777889999985 45433
Q ss_pred EEecCC------------------ccCeeeEEEc-CCCCEEEEecCCCcEEeec
Q 019006 312 YKLPGH------------------TGSVNESVFH-ATEPVIGSCSSDKQIYLGE 346 (347)
Q Consensus 312 ~~~~~h------------------~~~v~~~~~~-~~~~~l~s~s~D~~i~i~~ 346 (347)
.+.+. -.....+++. +++.++++=..++.|+..+
T Consensus 378 -t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~ 430 (433)
T 4hw6_A 378 -TYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIA 430 (433)
T ss_dssp -EEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEE
T ss_pred -EEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEe
Confidence 32221 1235678888 6666666666667776543
No 270
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.43 E-value=0.00058 Score=58.27 Aligned_cols=229 Identities=9% Similarity=0.050 Sum_probs=133.1
Q ss_pred CCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEE-EEecCCCeEEEEECCCCceeee-eeccCcceeEeecCCCCC
Q 019006 78 DRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQI-ISASPDKTLRAWDVETGKQIKK-MAEHNSFVNSCCPSRRGP 155 (347)
Q Consensus 78 d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~s~~~dg~i~iwd~~~~~~~~~-~~~~~~~v~~~~~~~~~~ 155 (347)
...|+..++.+.......+.........++|++.+..| .+-...+.|..++......... +...-.....++..+.+.
T Consensus 12 ~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g 91 (318)
T 3sov_A 12 RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGE 91 (318)
T ss_dssp EEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTT
T ss_pred cCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCC
Confidence 35677777765421121121222356789999855554 4555678899999876532111 111112233455555555
Q ss_pred CEEEEEcCCCceEEEeCCCCCceeec-CCCCceEEEEEcCCCCeEEEEe--cCCcEEEEeCCCCceEEEecCCCCceeEE
Q 019006 156 PLVVSGSDDGTAKLWDMRQRGAIQTF-PDKYQITAVSFSDASDKIYTGG--IDNDVKVWDLRKGEVSMTLQGHQDMITGM 232 (347)
Q Consensus 156 ~~~~s~~~d~~i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~i~~v 232 (347)
.++++-...+.|.++++......... ........++++|.+..++... ..+.|..+++............-...+.|
T Consensus 92 ~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pngl 171 (318)
T 3sov_A 92 KLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGL 171 (318)
T ss_dssp EEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEE
T ss_pred eEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccEE
Confidence 67777777788999998754333222 2334678899998877777665 35788888876433222222222346889
Q ss_pred EECCCCCEEEEE-cCCCcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCCceee
Q 019006 233 SLSPDGSYLLTN-GMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRIL 311 (347)
Q Consensus 233 ~~~~~~~~l~t~-~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~ 311 (347)
++++++..|..+ ...+.|..+|+... ..+. ..... ......+++.. +.++.+-...+.|..++..+++.+
T Consensus 172 avd~~~~~lY~aD~~~~~I~~~d~dG~--~~~~--~~~~~----~~~P~glav~~-~~lywtd~~~~~V~~~~~~~G~~~ 242 (318)
T 3sov_A 172 TLDYEEQKLYWADAKLNFIHKSNLDGT--NRQA--VVKGS----LPHPFALTLFE-DILYWTDWSTHSILACNKYTGEGL 242 (318)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSC--SCEE--EECSC----CSCEEEEEEET-TEEEEEETTTTEEEEEETTTCCSC
T ss_pred EEeccCCEEEEEECCCCEEEEEcCCCC--ceEE--EecCC----CCCceEEEEeC-CEEEEEecCCCeEEEEECCCCCce
Confidence 999976666554 55678999997631 1111 11111 12344555542 344455566788999998777665
Q ss_pred EEec
Q 019006 312 YKLP 315 (347)
Q Consensus 312 ~~~~ 315 (347)
..+.
T Consensus 243 ~~i~ 246 (318)
T 3sov_A 243 REIH 246 (318)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 5544
No 271
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.38 E-value=0.001 Score=58.71 Aligned_cols=229 Identities=9% Similarity=0.031 Sum_probs=135.4
Q ss_pred CcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEe-cCCCeEEEEECCCCc----eeeeeeccCcceeEeecCCC
Q 019006 79 RDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISA-SPDKTLRAWDVETGK----QIKKMAEHNSFVNSCCPSRR 153 (347)
Q Consensus 79 ~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~~dg~i~iwd~~~~~----~~~~~~~~~~~v~~~~~~~~ 153 (347)
..|+..++.+.. ...+......+..|+|++.+..|+-+ ..++.|+.+++.... ....+.........++....
T Consensus 92 ~~I~~i~l~~~~--~~~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~ 169 (400)
T 3p5b_L 92 HEVRKMTLDRSE--YTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI 169 (400)
T ss_dssp TEEEEECTTSCS--CEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETT
T ss_pred ceeEEEccCCcc--eeEeccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEec
Confidence 567777775432 22233344567899999866655544 566889888886521 11112212233444555554
Q ss_pred CCCEEEEEcCCCceEEEeCCCCCceeecC-CCCceEEEEEcCCCCeEEEEec--CCcEEEEeCCCCceEEEecCCCCcee
Q 019006 154 GPPLVVSGSDDGTAKLWDMRQRGAIQTFP-DKYQITAVSFSDASDKIYTGGI--DNDVKVWDLRKGEVSMTLQGHQDMIT 230 (347)
Q Consensus 154 ~~~~~~s~~~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~i~ 230 (347)
+..++++-...+.|.+.++........+. .......++++|.+..|+.... .+.|...++............-...+
T Consensus 170 ~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~ 249 (400)
T 3p5b_L 170 HSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPN 249 (400)
T ss_dssp TTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEE
T ss_pred CCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceE
Confidence 55677777778889999887654433333 2345788999998777776542 47899999865443333333334578
Q ss_pred EEEECCCCCEEEEE-cCCCcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCCce
Q 019006 231 GMSLSPDGSYLLTN-GMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRR 309 (347)
Q Consensus 231 ~v~~~~~~~~l~t~-~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~ 309 (347)
.|++++++..|+.+ ...+.|..+|+... ..+ ....... . ......+++. .+.++.+-...+.|..+|..+++
T Consensus 250 glavd~~~~~lY~aD~~~~~I~~~d~dG~--~~~--~~~~~~~-~-l~~P~gl~v~-~~~lywtd~~~~~V~~~~~~~G~ 322 (400)
T 3p5b_L 250 GITLDLLSGRLYWVDSKLHSISSIDVNGG--NRK--TILEDEK-R-LAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGS 322 (400)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSC--CCE--EEEECSS-T-TSSEEEEEEE-TTEEEEEESSSCSEEEEESSSCC
T ss_pred EEEEEeCCCEEEEEECCCCEEEEEeCCCC--ccE--EEEeCCC-C-CCCCEEEEEe-CCEEEEecCCCCeEEEEEcCCCC
Confidence 99999877766655 45678999997531 111 1111110 0 1223455552 33444555667889999987776
Q ss_pred eeEEecC
Q 019006 310 ILYKLPG 316 (347)
Q Consensus 310 ~~~~~~~ 316 (347)
.+..+..
T Consensus 323 ~~~~i~~ 329 (400)
T 3p5b_L 323 DVNLLAE 329 (400)
T ss_dssp CCEEEEC
T ss_pred ceEEEec
Confidence 6655543
No 272
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.33 E-value=0.00067 Score=60.53 Aligned_cols=152 Identities=10% Similarity=0.092 Sum_probs=92.2
Q ss_pred cEEEEEECC-CCCeEEEeeCCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEecC-CC----eEEEEECCCC
Q 019006 59 AVYTMKFNP-AGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASP-DK----TLRAWDVETG 132 (347)
Q Consensus 59 ~V~~v~~~~-~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~-dg----~i~iwd~~~~ 132 (347)
....|+++| ++..|..+...+.|+.++..+.. +..+.........++|++++++|+.+.. ++ .+.+.+. .+
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~--v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g 214 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEY--VSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-ES 214 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTE--EEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GG
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCE--EEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CC
Confidence 456888998 45555555555778888875432 2233334456789999999996665554 22 2333443 22
Q ss_pred cee--eeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCcee--ecCCCCceEEEEEcCCCCeEEEE-ecCCc
Q 019006 133 KQI--KKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQ--TFPDKYQITAVSFSDASDKIYTG-GIDND 207 (347)
Q Consensus 133 ~~~--~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~-~~dg~ 207 (347)
... ..+. .......++..+.+..++++-..++.|..++...+.... ..........++++|++++++.+ ...+.
T Consensus 215 ~~~~~~~l~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~ 293 (430)
T 3tc9_A 215 GFKVITELT-KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHY 293 (430)
T ss_dssp TSCSEEEEE-ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTE
T ss_pred ceeeeeeec-cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCE
Confidence 211 1221 112233455666456677777778899999987654322 22223456789999999966554 46678
Q ss_pred EEEEeCC
Q 019006 208 VKVWDLR 214 (347)
Q Consensus 208 i~iwd~~ 214 (347)
|..++..
T Consensus 294 I~~~~~d 300 (430)
T 3tc9_A 294 ILRSDYD 300 (430)
T ss_dssp EEEEEEE
T ss_pred EEEEeCC
Confidence 9998765
No 273
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.32 E-value=0.0011 Score=56.38 Aligned_cols=228 Identities=9% Similarity=0.031 Sum_probs=131.0
Q ss_pred CcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEE-EecCCCeEEEEECCC---Cceeeeee-ccCcceeEeecCCC
Q 019006 79 RDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQII-SASPDKTLRAWDVET---GKQIKKMA-EHNSFVNSCCPSRR 153 (347)
Q Consensus 79 ~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-s~~~dg~i~iwd~~~---~~~~~~~~-~~~~~v~~~~~~~~ 153 (347)
..|+..++.+.. ....+ ..-.....++|++.+..|+ +-..++.|..+++.. +.....+. ........++..+.
T Consensus 10 ~~I~~i~~~~~~-~~~~~-~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~ 87 (316)
T 1ijq_A 10 HEVRKMTLDRSE-YTSLI-PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI 87 (316)
T ss_dssp SSEEEEETTSCC-CEEEE-CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETT
T ss_pred CeEEEEECCCcc-eEehh-cCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeec
Confidence 457777775432 11222 2334578999998665555 445668999999875 12222221 11123344555444
Q ss_pred CCCEEEEEcCCCceEEEeCCCCCceeecC-CCCceEEEEEcCCCCeEEEEecC--CcEEEEeCCCCceEEEecCCCCcee
Q 019006 154 GPPLVVSGSDDGTAKLWDMRQRGAIQTFP-DKYQITAVSFSDASDKIYTGGID--NDVKVWDLRKGEVSMTLQGHQDMIT 230 (347)
Q Consensus 154 ~~~~~~s~~~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d--g~i~iwd~~~~~~~~~~~~~~~~i~ 230 (347)
+..++++-...+.|.+.|+.......... .......++++|.+..++.+... +.|..+++............-...+
T Consensus 88 ~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~~~~~~~P~ 167 (316)
T 1ijq_A 88 HSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPN 167 (316)
T ss_dssp TTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEE
T ss_pred CCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEEEECCCCCce
Confidence 55667777778899999987543322222 23467889999977777665543 6888888754332222222234568
Q ss_pred EEEECCCCCEEEEE-cCCCcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCCce
Q 019006 231 GMSLSPDGSYLLTN-GMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRR 309 (347)
Q Consensus 231 ~v~~~~~~~~l~t~-~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~ 309 (347)
.+++++++..|+.+ ...+.|..+|+... ..+. ...... . ......+++. .+.+.++-...+.|..++..+++
T Consensus 168 gla~d~~~~~lY~~D~~~~~I~~~d~dg~--~~~~--~~~~~~-~-~~~P~giav~-~~~ly~~d~~~~~V~~~~~~~g~ 240 (316)
T 1ijq_A 168 GITLDLLSGRLYWVDSKLHSISSIDVNGG--NRKT--ILEDEK-R-LAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGS 240 (316)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSC--SCEE--EEECTT-T-TSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCC
T ss_pred EEEEeccCCEEEEEECCCCeEEEEecCCC--ceEE--EeecCC-c-cCCcEEEEEE-CCEEEEEECCCCeEEEEeCCCCc
Confidence 99999877666554 45678999998631 1111 111110 0 1234455564 35555566677899999987776
Q ss_pred eeEEec
Q 019006 310 ILYKLP 315 (347)
Q Consensus 310 ~~~~~~ 315 (347)
.+..+.
T Consensus 241 ~~~~i~ 246 (316)
T 1ijq_A 241 DVNLLA 246 (316)
T ss_dssp CCEEEE
T ss_pred ceEEEe
Confidence 555554
No 274
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.31 E-value=0.00043 Score=56.71 Aligned_cols=199 Identities=9% Similarity=0.067 Sum_probs=122.4
Q ss_pred ceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeecCC--CCceEEEEEcCCCCeEEEEecCCcEEEEeCCCCce---
Q 019006 144 FVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPD--KYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEV--- 218 (347)
Q Consensus 144 ~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~--- 218 (347)
.+..+++.+.+..+++....++.|...|.. ++.+..++- ....-.+++.+++.++++.-.++.+.++++.....
T Consensus 28 ~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i~~ 106 (255)
T 3qqz_A 28 NISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVKI 106 (255)
T ss_dssp CEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECTTCCEEE
T ss_pred CcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCeeee
Confidence 455566666666677777788899999987 666666543 34677888888776656655667899998754331
Q ss_pred EEEe--c----CCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEecc---ccccccceEEEEECCCC-
Q 019006 219 SMTL--Q----GHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGH---QHNFEKNLLKCGWSPDG- 288 (347)
Q Consensus 219 ~~~~--~----~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~s~~g- 288 (347)
.... . ..+.....++|+|.++.|.++.......+|.+... .....+..+... .......+..++++|..
T Consensus 107 ~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~-~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg 185 (255)
T 3qqz_A 107 LKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGL-LSSNELHISKDKALQRQFTLDDVSGAEFNQQKN 185 (255)
T ss_dssp EEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEEST-TCSSCCEEEECHHHHHTCCSSCCCEEEEETTTT
T ss_pred eeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEccc-ccCCceeeecchhhccccccCCceeEEEcCCCC
Confidence 1111 1 12334689999999887777766555556555411 111112222110 00112356788899864
Q ss_pred CEEEEeeCCCeEEEEeCCCceeeEEe--c-CCc------cCeeeEEEcCCCCEEEEecCCCcEEeec
Q 019006 289 SKVTAGSSDRMVYIWDTTSRRILYKL--P-GHT------GSVNESVFHATEPVIGSCSSDKQIYLGE 346 (347)
Q Consensus 289 ~~l~sgs~dg~i~vwd~~~~~~~~~~--~-~h~------~~v~~~~~~~~~~~l~s~s~D~~i~i~~ 346 (347)
.+++....++.|..+|... +.+..+ . +.. .---.++|.+++.+.++ ++-..+|.++
T Consensus 186 ~lliLS~~s~~L~~~d~~g-~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE~n~~y~f~ 250 (255)
T 3qqz_A 186 TLLVLSHESRALQEVTLVG-EVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SEPNRFYRFT 250 (255)
T ss_dssp EEEEEETTTTEEEEECTTC-CEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ETTTEEEEEE
T ss_pred eEEEEECCCCeEEEEcCCC-CEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-cCCceEEEEE
Confidence 5556666778899999764 455433 3 211 13478999999986666 5555666653
No 275
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.31 E-value=0.0016 Score=58.17 Aligned_cols=239 Identities=8% Similarity=0.074 Sum_probs=130.0
Q ss_pred ccEEEEEECCC--CCeEEEeeCCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEecCC---Ce-EEEEECCC
Q 019006 58 SAVYTMKFNPA--GTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPD---KT-LRAWDVET 131 (347)
Q Consensus 58 ~~V~~v~~~~~--~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d---g~-i~iwd~~~ 131 (347)
.....|+|+|+ +..|..+...+.|+.++..+. .+..+.........++++++|+++++...+ .. +...+...
T Consensus 139 ~~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g--~v~~~~~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~ 216 (433)
T 4hw6_A 139 DNIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQ--YVDIKTTNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRAS 216 (433)
T ss_dssp SCCCEEEECTTTTTCEEEEECBTSCEEEEETTTT--EEEEECCCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGG
T ss_pred CCCceEEEccccCCCEEEEEeCCCCEEEEECCCC--EEEEeecCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCC
Confidence 34668899984 344444444488998887432 223333344567899999999954444321 12 22233221
Q ss_pred Ccee-eeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceee-c--CCCCceEEEEEcCCCCeEEEE-ecCC
Q 019006 132 GKQI-KKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQT-F--PDKYQITAVSFSDASDKIYTG-GIDN 206 (347)
Q Consensus 132 ~~~~-~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~-~--~~~~~v~~~~~~~~~~~l~~~-~~dg 206 (347)
+... ..+. .......++..+....++++-..++.|+.+|..++..... + ........++++|+++.|+.+ ...+
T Consensus 217 ~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~ 295 (433)
T 4hw6_A 217 GFTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKH 295 (433)
T ss_dssp TTCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTT
T ss_pred Ceecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCC
Confidence 1110 1111 1122233455564556776666778899998875554222 1 112223469999999966655 4567
Q ss_pred cEEEEeCC--CCce--EEEecCC---------------CCceeEEEE---------CCCCCEEEEEcCCCcEEEEeCCCC
Q 019006 207 DVKVWDLR--KGEV--SMTLQGH---------------QDMITGMSL---------SPDGSYLLTNGMDCKLCIWDMRPY 258 (347)
Q Consensus 207 ~i~iwd~~--~~~~--~~~~~~~---------------~~~i~~v~~---------~~~~~~l~t~~~d~~i~~wd~~~~ 258 (347)
.|+.++.. ++.. ...+.+. -.....+++ .++++..++-...+.|+.++..
T Consensus 296 ~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~~-- 373 (433)
T 4hw6_A 296 CIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTPE-- 373 (433)
T ss_dssp EEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECTT--
T ss_pred EEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECCC--
Confidence 89998865 2221 1111111 123567898 7777777777777889888742
Q ss_pred CCcCceeEEEecccc--------c------cccceEEEEEC-CCCCEEEEeeCCCeEEEEeC
Q 019006 259 APQNRCVKILEGHQH--------N------FEKNLLKCGWS-PDGSKVTAGSSDRMVYIWDT 305 (347)
Q Consensus 259 ~~~~~~~~~~~~~~~--------~------~~~~~~~~~~s-~~g~~l~sgs~dg~i~vwd~ 305 (347)
+. +..+.+... . .-.....++++ ++|.++++=...+.|+.+++
T Consensus 374 ---G~-v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~ 431 (433)
T 4hw6_A 374 ---GR-VTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAP 431 (433)
T ss_dssp ---SE-EEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEE
T ss_pred ---CC-EEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEec
Confidence 22 222222110 0 01235567777 45555555555566666654
No 276
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.29 E-value=0.0013 Score=56.23 Aligned_cols=268 Identities=8% Similarity=0.027 Sum_probs=138.8
Q ss_pred cccEEEEEECCCCCeEEEeeCCCcEEEEeccCCCeeeEEEe----CcccceeEEEEcCCCCEEEEecCCCeEEEEECCCC
Q 019006 57 QSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLK----GHKNAILDLHWTTDGSQIISASPDKTLRAWDVETG 132 (347)
Q Consensus 57 ~~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~----~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~ 132 (347)
...+.+|.|.+.+..+++ +.+|.|... .++ .+...... .....+.+|.+.+ + .++.++.++.|.. ..+.+
T Consensus 35 ~~~~~~v~~~~~~~~~~~-G~~g~i~~s-~Dg-G~tW~~~~~~~~~~~~~~~~i~~~~-~-~~~~~g~~g~i~~-S~DgG 108 (327)
T 2xbg_A 35 TATILDMSFIDRHHGWLV-GVNATLMET-RDG-GQTWEPRTLVLDHSDYRFNSVSFQG-N-EGWIVGEPPIMLH-TTDGG 108 (327)
T ss_dssp SSCEEEEEESSSSCEEEE-ETTTEEEEE-SST-TSSCEECCCCCSCCCCEEEEEEEET-T-EEEEEEETTEEEE-ESSTT
T ss_pred CCcEEEEEECCCCcEEEE-cCCCeEEEe-CCC-CCCCeECCCCCCCCCccEEEEEecC-C-eEEEEECCCeEEE-ECCCC
Confidence 347899999887777774 556765332 322 11111111 1234678888876 3 4444566675544 22334
Q ss_pred ceeeeeec---cCcceeEeecCCCCCCEEEEEcCCCceE-EEeCCCCCceeec--CCCCceEEEEEcCCCCeEEEEecCC
Q 019006 133 KQIKKMAE---HNSFVNSCCPSRRGPPLVVSGSDDGTAK-LWDMRQRGAIQTF--PDKYQITAVSFSDASDKIYTGGIDN 206 (347)
Q Consensus 133 ~~~~~~~~---~~~~v~~~~~~~~~~~~~~s~~~d~~i~-iwd~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~dg 206 (347)
+.-..... ....+..+.....+ .+++.+ .++.+. -.| .++..... +....+..+.+.+++..++.+. +|
T Consensus 109 ~tW~~~~~~~~~~~~~~~i~~~~~~-~~~~~~-~~g~v~~S~D--gG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~-~G 183 (327)
T 2xbg_A 109 QSWSQIPLDPKLPGSPRLIKALGNG-SAEMIT-NVGAIYRTKD--SGKNWQALVQEAIGVMRNLNRSPSGEYVAVSS-RG 183 (327)
T ss_dssp SSCEECCCCTTCSSCEEEEEEEETT-EEEEEE-TTCCEEEESS--TTSSEEEEECSCCCCEEEEEECTTSCEEEEET-TS
T ss_pred CCceECccccCCCCCeEEEEEECCC-CEEEEe-CCccEEEEcC--CCCCCEEeecCCCcceEEEEEcCCCcEEEEEC-CC
Confidence 33222211 12223344433322 344444 455442 222 22222222 2234678889998877666554 45
Q ss_pred cEEE-EeC--CCCceEEEecCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEeccccccccceEEEE
Q 019006 207 DVKV-WDL--RKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCG 283 (347)
Q Consensus 207 ~i~i-wd~--~~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (347)
.++. .|- .+-+.. . ......+..+.+.++++.++. +.+|.+.+.+... ......+..........+..+.
T Consensus 184 ~~~~S~d~gG~tW~~~-~-~~~~~~~~~~~~~~~g~~~~~-~~~G~~~~s~~D~----G~tW~~~~~~~~~~~~~~~~v~ 256 (327)
T 2xbg_A 184 SFYSTWEPGQTAWEPH-N-RTTSRRLHNMGFTPDGRLWMI-VNGGKIAFSDPDN----SENWGELLSPLRRNSVGFLDLA 256 (327)
T ss_dssp SEEEEECTTCSSCEEE-E-CCSSSCEEEEEECTTSCEEEE-ETTTEEEEEETTE----EEEECCCBCTTSSCCSCEEEEE
T ss_pred cEEEEeCCCCCceeEC-C-CCCCCccceeEECCCCCEEEE-eCCceEEEecCCC----CCeeEeccCCcccCCcceEEEE
Confidence 5444 332 111221 1 223456888999998876544 5577777763110 1111111100000012467888
Q ss_pred ECCCCCEEEEeeCCCeEEEEeCCCceeeEEec---CCccCeeeEEEcCCCCEEEEecCCCcEEee
Q 019006 284 WSPDGSKVTAGSSDRMVYIWDTTSRRILYKLP---GHTGSVNESVFHATEPVIGSCSSDKQIYLG 345 (347)
Q Consensus 284 ~s~~g~~l~sgs~dg~i~vwd~~~~~~~~~~~---~h~~~v~~~~~~~~~~~l~s~s~D~~i~i~ 345 (347)
+.+++..+++|. +|.| ++..+.++.-..+. .+...+..+.|.+++ .+..++.+|.|+-.
T Consensus 257 ~~~~~~~~~~g~-~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~-~~~~~G~~G~i~~~ 318 (327)
T 2xbg_A 257 YRTPNEVWLAGG-AGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPD-QGFILGQKGILLRY 318 (327)
T ss_dssp ESSSSCEEEEES-TTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETT-EEEEECSTTEEEEE
T ss_pred ecCCCEEEEEeC-CCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCC-ceEEEcCCceEEEE
Confidence 998888777765 5666 34445555444443 234568889998655 46677788887654
No 277
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.28 E-value=0.001 Score=54.48 Aligned_cols=204 Identities=11% Similarity=0.167 Sum_probs=122.7
Q ss_pred EEeCcccceeEEEEcCCCCEEEE-ecCCCeEEEEECCCCceeeeeeccC-cceeEeecCCCCCCEEEEEcCCCceEEEeC
Q 019006 95 VLKGHKNAILDLHWTTDGSQIIS-ASPDKTLRAWDVETGKQIKKMAEHN-SFVNSCCPSRRGPPLVVSGSDDGTAKLWDM 172 (347)
Q Consensus 95 ~~~~h~~~v~~~~~~~~~~~l~s-~~~dg~i~iwd~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~ 172 (347)
.+.+-...+..++|+|+++.|++ ...++.|...|.. ++.++.+.... .-...++....+ .++++.-.++.+.++++
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g-~~~vs~E~~~~l~~~~v 98 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDN-QFVISDERDYAIYVISL 98 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTT-EEEEEETTTTEEEEEEE
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCC-EEEEEECCCCcEEEEEc
Confidence 34455567999999998776655 6678889999987 77777664321 223344444443 35566556678888877
Q ss_pred CCCCce---eec-------CCCCceEEEEEcCCCCeEEEEecCCcEEEEeCC---CCceEEEec-------CCCCceeEE
Q 019006 173 RQRGAI---QTF-------PDKYQITAVSFSDASDKIYTGGIDNDVKVWDLR---KGEVSMTLQ-------GHQDMITGM 232 (347)
Q Consensus 173 ~~~~~~---~~~-------~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~---~~~~~~~~~-------~~~~~i~~v 232 (347)
.....+ ... +.......++++|.++.|+++.......+|.+. .......+. .+...+.++
T Consensus 99 ~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l 178 (255)
T 3qqz_A 99 TPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGA 178 (255)
T ss_dssp CTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEE
T ss_pred CCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeE
Confidence 654421 111 223457899999999888887776555555443 111111111 122346889
Q ss_pred EECCC-CCEEEEEcCCCcEEEEeCCCCCCcCceeEEEeccc--ccc---ccceEEEEECCCCCEEEEeeCCCeEEEEeCC
Q 019006 233 SLSPD-GSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQ--HNF---EKNLLKCGWSPDGSKVTAGSSDRMVYIWDTT 306 (347)
Q Consensus 233 ~~~~~-~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~--~~~---~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~ 306 (347)
+++|. +++++.....+.+..+|... +.+..+.-.. ... ....-.++|.++|.+.++ +.-+.+++|...
T Consensus 179 ~~dp~tg~lliLS~~s~~L~~~d~~g-----~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE~n~~y~f~~~ 252 (255)
T 3qqz_A 179 EFNQQKNTLLVLSHESRALQEVTLVG-----EVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SEPNRFYRFTPQ 252 (255)
T ss_dssp EEETTTTEEEEEETTTTEEEEECTTC-----CEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ETTTEEEEEEC-
T ss_pred EEcCCCCeEEEEECCCCeEEEEcCCC-----CEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-cCCceEEEEEec
Confidence 99996 45566666777888898652 2223222111 010 124567889999985544 777788888654
No 278
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.19 E-value=7.4e-05 Score=70.95 Aligned_cols=239 Identities=9% Similarity=0.034 Sum_probs=129.6
Q ss_pred CcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEe-cCCCeEEEEECCC----CceeeeeeccCcceeEeecCCC
Q 019006 79 RDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISA-SPDKTLRAWDVET----GKQIKKMAEHNSFVNSCCPSRR 153 (347)
Q Consensus 79 ~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~~dg~i~iwd~~~----~~~~~~~~~~~~~v~~~~~~~~ 153 (347)
+.|+..++.+.. ...+......+..|+|++.+..|+.+ ...+.|+.+++.. ......+.........+++...
T Consensus 386 ~~I~~id~~~~~--~~~~~~~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~ 463 (699)
T 1n7d_A 386 HEVRKMTLDRSE--YTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI 463 (699)
T ss_dssp TC-CEECTTSCC--EECCSCCCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCS
T ss_pred cceEEEeCCCCc--ceeeeccCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEee
Confidence 466666664321 11122222356788999877666655 4567899998875 1111111111112233444444
Q ss_pred CCCEEEEEcCCCceEEEeCCCCCceeecCC-CCceEEEEEcCCCCeEEEEec--CCcEEEEeCCCCceEEEecCCCCcee
Q 019006 154 GPPLVVSGSDDGTAKLWDMRQRGAIQTFPD-KYQITAVSFSDASDKIYTGGI--DNDVKVWDLRKGEVSMTLQGHQDMIT 230 (347)
Q Consensus 154 ~~~~~~s~~~d~~i~iwd~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~i~ 230 (347)
+..++++-...+.|.++++........+.. ......++++|.+..|+.+.. .+.|..+++........+...-...+
T Consensus 464 ~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~Pn 543 (699)
T 1n7d_A 464 HSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPN 543 (699)
T ss_dssp SSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCC
T ss_pred CCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCcc
Confidence 455666666678899998875543333332 234677889987776665543 36788887753322222222223457
Q ss_pred EEEECCCCCEE-EEEcCCCcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCCce
Q 019006 231 GMSLSPDGSYL-LTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRR 309 (347)
Q Consensus 231 ~v~~~~~~~~l-~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~ 309 (347)
.|+|+|++..| ++-...+.|..+|+... . ...+....... .....+++..+ .++++....+.|..++..+++
T Consensus 544 Glavd~~~~~LY~aD~~~~~I~~~d~dG~--~---~~~~~~~~~~~-~~P~glavd~~-~lywtd~~~~~V~~~d~~~G~ 616 (699)
T 1n7d_A 544 GITLDLLSGRLYWVDSKLHSISSIDVNGG--N---RKTILEDEKRL-AHPFSLAVFED-KVFWTDIINEAIFSANRLTGS 616 (699)
T ss_dssp CEEECTTTCCEEEEETTTTEEEEECSSSS--C---CEEECCCSSSC-SSCCCCEEETT-EEEEECSTTTCEEEEETTTEE
T ss_pred EEEEeccCCEEEEEecCCCeEEEEccCCC--c---eEEEEecCCcC-CCceEeEEECC-EEEEEeCCCCeEEEEEccCCC
Confidence 89999875544 45556678999997531 1 11111100000 11223334333 344455667899999988888
Q ss_pred eeEEecCCccCeeeEEE
Q 019006 310 ILYKLPGHTGSVNESVF 326 (347)
Q Consensus 310 ~~~~~~~h~~~v~~~~~ 326 (347)
.+..+.........+++
T Consensus 617 ~~~~i~~~~~~P~~i~v 633 (699)
T 1n7d_A 617 DVNLLAENLLSPEDMVL 633 (699)
T ss_dssp EEECCCTTCSSCCCCCB
T ss_pred ceEEeecCCCCCcEEEE
Confidence 77766543333444443
No 279
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.18 E-value=0.0025 Score=55.05 Aligned_cols=214 Identities=8% Similarity=-0.063 Sum_probs=125.7
Q ss_pred CeEEEEECCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeecCC-CCceEEEEEcCCCCeEE
Q 019006 122 KTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPD-KYQITAVSFSDASDKIY 200 (347)
Q Consensus 122 g~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~ 200 (347)
..|+..++...... .+.........+.+.+....++++-...+.|..+++........... ......+++++.++.|+
T Consensus 53 ~~I~~i~~~g~~~~-~~~~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly 131 (349)
T 3v64_C 53 IDIRQVLPHRSEYT-LLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLY 131 (349)
T ss_dssp SCEEEECTTSCCEE-EEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEE
T ss_pred cceEEEeCCCCeeE-EeecCCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEE
Confidence 44666666544332 22222233455666655666777777788898898876543333322 23457788887666555
Q ss_pred -EEecCCcEEEEeCCCCceEEEecCCCCceeEEEECCCCCEEEEEc-CC-CcEEEEeCCCCCCcCceeEEEecccccccc
Q 019006 201 -TGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNG-MD-CKLCIWDMRPYAPQNRCVKILEGHQHNFEK 277 (347)
Q Consensus 201 -~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~-~d-~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~ 277 (347)
+-...+.|.++++........+.........++++|.+..|+... .. +.|...++... ....+... . -.
T Consensus 132 ~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~-----~~~~~~~~--~-~~ 203 (349)
T 3v64_C 132 WTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGS-----GRRIIADT--H-LF 203 (349)
T ss_dssp EEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-----SCEESCCS--S-CS
T ss_pred EEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCC-----CcEEEEEC--C-CC
Confidence 445567899999875443333333334578999999666555443 34 67888887531 11111110 1 12
Q ss_pred ceEEEEECCCCCEEEEe-eCCCeEEEEeCCCceeeEEecCCccCeeeEEEcCCCCEEEEecCCCcEEee
Q 019006 278 NLLKCGWSPDGSKVTAG-SSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLG 345 (347)
Q Consensus 278 ~~~~~~~s~~g~~l~sg-s~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~i~ 345 (347)
....++++|++..|..+ +..+.|+.+|+........+...-.....+++ ..+.+..+-...+.|...
T Consensus 204 ~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav-~~~~ly~td~~~~~V~~~ 271 (349)
T 3v64_C 204 WPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV-FEDSLYWTDWHTKSINSA 271 (349)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEE-ETTEEEEEETTTTEEEEE
T ss_pred CcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEE-ECCEEEEecCCCCeEEEE
Confidence 46788999877777655 45678999998754433333333445567777 445555555555555543
No 280
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.16 E-value=0.0029 Score=55.52 Aligned_cols=215 Identities=7% Similarity=-0.072 Sum_probs=129.0
Q ss_pred CCeEEEEECCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeecCC-CCceEEEEEcCCCCeE
Q 019006 121 DKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPD-KYQITAVSFSDASDKI 199 (347)
Q Consensus 121 dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~~-~~~v~~~~~~~~~~~l 199 (347)
...|+..++....... +.........+.+.+....++++-...+.|..+++........+.. ......+++++.++.|
T Consensus 95 ~~~I~~i~~~~~~~~~-~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~l 173 (386)
T 3v65_B 95 RIDIRQVLPHRSEYTL-LLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKL 173 (386)
T ss_dssp BSCEEEECTTSCCCEE-EECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEE
T ss_pred CccceeeccCCCcEEE-EecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeE
Confidence 3567777876554322 2222334455666666666777777788899999876543333222 2345678888766665
Q ss_pred EE-EecCCcEEEEeCCCCceEEEecCCCCceeEEEECCCCCEEEEEc-CC-CcEEEEeCCCCCCcCceeEEEeccccccc
Q 019006 200 YT-GGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNG-MD-CKLCIWDMRPYAPQNRCVKILEGHQHNFE 276 (347)
Q Consensus 200 ~~-~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~-~d-~~i~~wd~~~~~~~~~~~~~~~~~~~~~~ 276 (347)
+. -...+.|.++++........+.........++++|.+.+|+... .. +.|...++... ....+.... -
T Consensus 174 Y~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~-----~~~~~~~~~---~ 245 (386)
T 3v65_B 174 YWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGS-----GRRIIADTH---L 245 (386)
T ss_dssp EEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-----SCEEEECSS---C
T ss_pred EEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCC-----CcEEEEECC---C
Confidence 54 45567899988865443333333334578999998777665554 33 67888876531 111121111 1
Q ss_pred cceEEEEECCCCCEEEEe-eCCCeEEEEeCCCceeeEEecCCccCeeeEEEcCCCCEEEEecCCCcEEee
Q 019006 277 KNLLKCGWSPDGSKVTAG-SSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLG 345 (347)
Q Consensus 277 ~~~~~~~~s~~g~~l~sg-s~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~i~ 345 (347)
.....++++|++..|..+ +..+.|+.+|+........+.........+++ ..+.++.+-...+.|...
T Consensus 246 ~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav-~~~~ly~td~~~~~V~~~ 314 (386)
T 3v65_B 246 FWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV-FEDSLYWTDWHTKSINSA 314 (386)
T ss_dssp SCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEE-ETTEEEEEETTTTEEEEE
T ss_pred CCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEE-ECCEEEEeeCCCCeEEEE
Confidence 246788999877776655 45678999998754433333333445677777 455566666666666544
No 281
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.15 E-value=0.00037 Score=66.91 Aligned_cols=194 Identities=10% Similarity=0.101 Sum_probs=104.5
Q ss_pred ceeEEEEc-CCCCEEEEec-CC----CeEEEEECCCC-ceeee-eeccCcceeEeecCCCCCCEEEEEcCC----CceEE
Q 019006 102 AILDLHWT-TDGSQIISAS-PD----KTLRAWDVETG-KQIKK-MAEHNSFVNSCCPSRRGPPLVVSGSDD----GTAKL 169 (347)
Q Consensus 102 ~v~~~~~~-~~~~~l~s~~-~d----g~i~iwd~~~~-~~~~~-~~~~~~~v~~~~~~~~~~~~~~s~~~d----~~i~i 169 (347)
.+....|| |||++|+-+. .+ .+|+++|+.++ +.+.. +.. ......+++++..++++...+ ..|..
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~~---~~~~~~WspDg~~l~y~~~d~~~~~~~v~~ 251 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVSG---TNGEIVWGPDHTSLFYVTKDETLRENKVWR 251 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEEE---ECSCCEECSSTTEEEEEEECTTCCEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccccC---ceeeEEEecCCCEEEEEEECCCCCCCEEEE
Confidence 57788999 9999887443 22 35999999988 63221 111 123456677765555554322 25777
Q ss_pred EeCCCCCc--eeec--CCCCceEEEEEcCCCCeEEEEec---CCcEEEEeCCCCc-eE--EEe-cCCCCceeEEEECCCC
Q 019006 170 WDMRQRGA--IQTF--PDKYQITAVSFSDASDKIYTGGI---DNDVKVWDLRKGE-VS--MTL-QGHQDMITGMSLSPDG 238 (347)
Q Consensus 170 wd~~~~~~--~~~~--~~~~~v~~~~~~~~~~~l~~~~~---dg~i~iwd~~~~~-~~--~~~-~~~~~~i~~v~~~~~~ 238 (347)
+++.++.. ...+ +.......+.|+|++++|+..+. ...|+++|+.++. .. ..+ ........++.|+..+
T Consensus 252 ~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~ 331 (751)
T 2xe4_A 252 HVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGTS 331 (751)
T ss_dssp EETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEETTT
T ss_pred EECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeeeCC
Confidence 78866532 1222 22334567899999998876553 3468889987652 12 223 2233445556554444
Q ss_pred CEEEEEcCC--C--cEEEEeCCCCCCcCceeE-EEeccccccccceEEEEECCCCCEEEEeeCCCe--EEEEeC
Q 019006 239 SYLLTNGMD--C--KLCIWDMRPYAPQNRCVK-ILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRM--VYIWDT 305 (347)
Q Consensus 239 ~~l~t~~~d--~--~i~~wd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~--i~vwd~ 305 (347)
.+++....+ + .|..+|+... ..... .+. +. ....+..+.+. .+.++++...++. |+++|+
T Consensus 332 ~l~~~t~~~~a~~~~L~~~d~~~~---~~~~~~li~-~~--~~~~l~~~~~~-~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 332 HLVILTNEGGAVNHKLLIAPRGQP---SDWSHVLVD-HS--EDVFMESIAVR-SNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp EEEEEECTTTCTTCEEEEEETTST---TCCCCEEEC-CC--SSEEEEEEEEC-SSEEEEEEEETTEEEEEEEEC
T ss_pred EEEEEeCCCCCCCcEEEEEcCCCc---ccceeeEEC-CC--CCcEEEEEEEE-CCEEEEEEEeCCEEEEEEEec
Confidence 444444443 2 5666665421 11111 121 11 11233444443 2344556667775 556665
No 282
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.15 E-value=0.00018 Score=67.98 Aligned_cols=229 Identities=13% Similarity=0.053 Sum_probs=120.2
Q ss_pred EEEEcC-CCCEEEEecCCC-----------eEEEEECCCCcee--eeeec-cCcceeEeecCCCCCCEEEEEc-CCCceE
Q 019006 105 DLHWTT-DGSQIISASPDK-----------TLRAWDVETGKQI--KKMAE-HNSFVNSCCPSRRGPPLVVSGS-DDGTAK 168 (347)
Q Consensus 105 ~~~~~~-~~~~l~s~~~dg-----------~i~iwd~~~~~~~--~~~~~-~~~~v~~~~~~~~~~~~~~s~~-~d~~i~ 168 (347)
++++.+ +++.++.|+.+. .+.+||..+++.. ..+.. +.......+.... ..+++.|+ .+..+.
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~-g~lyv~GG~~~~~v~ 268 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGN-GQIVVTGGNDAKKTS 268 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTT-SCEEEECSSSTTCEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCC-CCEEEeCCCCCCceE
Confidence 456666 777788876543 5888998876532 22211 2222222333333 45777777 456899
Q ss_pred EEeCCCCCceee--cCCCCceEEEEEcCCCCeEEEEe-cC-----CcEEEEeCCCCceEEEecCC-----CCceeEEEEC
Q 019006 169 LWDMRQRGAIQT--FPDKYQITAVSFSDASDKIYTGG-ID-----NDVKVWDLRKGEVSMTLQGH-----QDMITGMSLS 235 (347)
Q Consensus 169 iwd~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~-~d-----g~i~iwd~~~~~~~~~~~~~-----~~~i~~v~~~ 235 (347)
+||..+..-... ++..-.-.+++..++++.++.|+ .+ ..+.+||..+.+-.. +... ...-....+.
T Consensus 269 ~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~-~~~~~~~p~~~~~~~~~~~ 347 (656)
T 1k3i_A 269 LYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTS-LPNAKVNPMLTADKQGLYR 347 (656)
T ss_dssp EEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEE-ETTSCSGGGCCCCTTGGGT
T ss_pred EecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCccee-CCCccccccccccccceee
Confidence 999876543222 22221223445556788888888 34 469999998765322 1100 0000001122
Q ss_pred CCCCEEEEEcCCC---------cEEEEeCCCCCCcCceeEEEecccc-----ccccceEEEEEC-CCCCEEEEeeCCC--
Q 019006 236 PDGSYLLTNGMDC---------KLCIWDMRPYAPQNRCVKILEGHQH-----NFEKNLLKCGWS-PDGSKVTAGSSDR-- 298 (347)
Q Consensus 236 ~~~~~l~t~~~d~---------~i~~wd~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~s-~~g~~l~sgs~dg-- 298 (347)
.++..++.++.++ .+..||.... ........... .....-..+.|. .++++++.|+.++
T Consensus 348 ~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~----~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~ 423 (656)
T 1k3i_A 348 SDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGS----GDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQ 423 (656)
T ss_dssp TTCSCCEEECGGGCEEECCSSSEEEEEECSTT----CEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSS
T ss_pred cCCceEEEECCCCcEEEecCccceeeeecCCc----ceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCC
Confidence 3444445554443 4667776532 11121111110 000112333443 3778888888543
Q ss_pred ---------eEEEEeCCCceeeEEe--cCCccCe-eeEEEcCCCCEEEEecCC
Q 019006 299 ---------MVYIWDTTSRRILYKL--PGHTGSV-NESVFHATEPVIGSCSSD 339 (347)
Q Consensus 299 ---------~i~vwd~~~~~~~~~~--~~h~~~v-~~~~~~~~~~~l~s~s~D 339 (347)
.|.+||..+..-.... .-+.... ..++..|++++++.+|.+
T Consensus 424 ~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~ 476 (656)
T 1k3i_A 424 DSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQR 476 (656)
T ss_dssp SSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBS
T ss_pred CCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcc
Confidence 6888888776543322 1122222 345677899999999865
No 283
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.12 E-value=0.0013 Score=56.06 Aligned_cols=197 Identities=14% Similarity=0.293 Sum_probs=117.9
Q ss_pred CCEEEEecCCCeEEEEECCCCceeeeeeccCcceeEeecCC----CCCC--EEEE-EcC--CCceEEEeCC-CCCceeec
Q 019006 112 GSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSR----RGPP--LVVS-GSD--DGTAKLWDMR-QRGAIQTF 181 (347)
Q Consensus 112 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~----~~~~--~~~s-~~~--d~~i~iwd~~-~~~~~~~~ 181 (347)
...++.....+-+.+||+ +++.+..+.. ..++.+..-+ .+.. ++++ .-. +++|.+|++. ....+..+
T Consensus 40 ~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~i 116 (355)
T 3amr_A 40 NSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSM 116 (355)
T ss_dssp GCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEEC
T ss_pred ccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceeec
Confidence 345666667788999999 7888777653 1222211111 1111 2333 333 5889999773 22234433
Q ss_pred -----C--CC-CceEEEEE--cCCCC--eEEEEecCCcEEEEeCC---C----CceEEEecCCCCceeEEEECCCCCEEE
Q 019006 182 -----P--DK-YQITAVSF--SDASD--KIYTGGIDNDVKVWDLR---K----GEVSMTLQGHQDMITGMSLSPDGSYLL 242 (347)
Q Consensus 182 -----~--~~-~~v~~~~~--~~~~~--~l~~~~~dg~i~iwd~~---~----~~~~~~~~~~~~~i~~v~~~~~~~~l~ 242 (347)
+ .. ..+..+++ ++... ++++...+|.+..|++. . .+.+.++.. ...+..+...+...+|+
T Consensus 117 ~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd~~g~Ly 195 (355)
T 3amr_A 117 TDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAADDEYGRLY 195 (355)
T ss_dssp SCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEETTTTEEE
T ss_pred cccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEEcCCCCeEE
Confidence 2 22 45666777 66544 57888889999999883 2 344555553 34688889999889999
Q ss_pred EEcCCCcEEEEeCCCCCC-cCceeEEEeccccccccceEEEEE--CCCCC-EEEEee-CCCeEEEEeCC-CceeeEEe
Q 019006 243 TNGMDCKLCIWDMRPYAP-QNRCVKILEGHQHNFEKNLLKCGW--SPDGS-KVTAGS-SDRMVYIWDTT-SRRILYKL 314 (347)
Q Consensus 243 t~~~d~~i~~wd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--s~~g~-~l~sgs-~dg~i~vwd~~-~~~~~~~~ 314 (347)
.+-++..|..+|.++... ....+..... ......+-.+++ .++++ +|++++ .++...+||.. +.+.+..+
T Consensus 196 v~eEd~GIw~~da~p~~~~~~~~v~~~~~--g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~vg~f 271 (355)
T 3amr_A 196 IAEEDEAIWKFSAEPDGGSNGTVIDRADG--RHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYVADF 271 (355)
T ss_dssp EEETTTEEEEEECSTTSCSCCEEEEEBSS--SSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEEE
T ss_pred EecccceEEEEeCCcCCCCCceEEEEecC--CccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEEEEE
Confidence 999987776667554321 1223333221 112223444544 66666 666666 56799999996 66666655
No 284
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.09 E-value=0.0025 Score=57.34 Aligned_cols=240 Identities=11% Similarity=0.023 Sum_probs=129.0
Q ss_pred eeEEEEcC-CCCEEEEec-CCCeEEEEECCCCceeeeeeccC---cceeEeec-------CCCCCCEEEEEcCCCc----
Q 019006 103 ILDLHWTT-DGSQIISAS-PDKTLRAWDVETGKQIKKMAEHN---SFVNSCCP-------SRRGPPLVVSGSDDGT---- 166 (347)
Q Consensus 103 v~~~~~~~-~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~---~~v~~~~~-------~~~~~~~~~s~~~d~~---- 166 (347)
...|+|+| +...|+.+. ..+.|++.|+.++.......... .....+++ .+.+..++++-..++.
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~ 220 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDES 220 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGE
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccC
Confidence 45789998 355555544 44678888887765433222211 13455666 6666545555544422
Q ss_pred --eEEEeCCC-CCce-----eecCCCCceEEEEEcCCCCeEE-EEecCCcEEEEeCC-------CCce------------
Q 019006 167 --AKLWDMRQ-RGAI-----QTFPDKYQITAVSFSDASDKIY-TGGIDNDVKVWDLR-------KGEV------------ 218 (347)
Q Consensus 167 --i~iwd~~~-~~~~-----~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~iwd~~-------~~~~------------ 218 (347)
+.+++... +... ..+..-.....++++|++..|+ +-..++.|+.+|+. ++..
T Consensus 221 ~~V~~i~r~~~G~~~~~~~~~~v~~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~ 300 (496)
T 3kya_A 221 PSVYIIKRNADGTFDDRSDIQLIAAYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTF 300 (496)
T ss_dssp EEEEEEECCTTSCCSTTSCEEEEEEESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTE
T ss_pred ceEEEEecCCCCceeecccceeeccCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccccccc
Confidence 55665333 1211 1222112345678899666655 45567789999987 4443
Q ss_pred --EEEecCCCCceeEEEECCCCCEEE-EEcCCCcEEEEeCCCCCCcCceeEEEecc---c---------cccccceE-EE
Q 019006 219 --SMTLQGHQDMITGMSLSPDGSYLL-TNGMDCKLCIWDMRPYAPQNRCVKILEGH---Q---------HNFEKNLL-KC 282 (347)
Q Consensus 219 --~~~~~~~~~~i~~v~~~~~~~~l~-t~~~d~~i~~wd~~~~~~~~~~~~~~~~~---~---------~~~~~~~~-~~ 282 (347)
..... .......|+|+|++++|+ +-.....|+.+|.............+.+. . ..+. ... .+
T Consensus 301 ~~l~~~~-~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~-~P~~gv 378 (496)
T 3kya_A 301 KQLFTIA-DPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMN-NPCQGV 378 (496)
T ss_dssp EEEEECS-SSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCS-SEEEEE
T ss_pred ceeEecC-CCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccC-CCeEEE
Confidence 11222 223457899999999544 44566788886654211000000111111 0 0111 123 33
Q ss_pred EEC-------CCCCEEEEeeCCCeEEEEeCCCceeeEEecCC---------------c---------cCeeeEEEcCC-C
Q 019006 283 GWS-------PDGSKVTAGSSDRMVYIWDTTSRRILYKLPGH---------------T---------GSVNESVFHAT-E 330 (347)
Q Consensus 283 ~~s-------~~g~~l~sgs~dg~i~vwd~~~~~~~~~~~~h---------------~---------~~v~~~~~~~~-~ 330 (347)
+.. ++|.+.++=+....|+.++. ++. +.++-|. . .....|++.++ +
T Consensus 379 ~vd~~~~~~~~~g~lyVaD~~N~rIr~i~~-~G~-v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g 456 (496)
T 3kya_A 379 FVKNPDYTGEEEYDFYFVDRLNFCVRKVTP-EGI-VSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKE 456 (496)
T ss_dssp EEECTTCCSSCCEEEEEEEGGGTEEEEECT-TCB-EEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTT
T ss_pred EEccccccccCCCeEEEEECCCCEEEEEeC-CCC-EEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCC
Confidence 343 45666677677888999983 453 3333222 0 13567888886 6
Q ss_pred CEEEEecCCCcEEeec
Q 019006 331 PVIGSCSSDKQIYLGE 346 (347)
Q Consensus 331 ~~l~s~s~D~~i~i~~ 346 (347)
.++++=..++.|+..+
T Consensus 457 ~lyVaD~~N~rIrki~ 472 (496)
T 3kya_A 457 MFYVHDQVGHTIRTIS 472 (496)
T ss_dssp EEEEEETTTTEEEEEE
T ss_pred EEEEEeCCCCEEEEEE
Confidence 6666666666676554
No 285
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.09 E-value=0.0083 Score=57.58 Aligned_cols=228 Identities=11% Similarity=0.062 Sum_probs=132.8
Q ss_pred CCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEE-EEecCCCeEEEEECCCC----ceeeeeeccCcceeEeecCC
Q 019006 78 DRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQI-ISASPDKTLRAWDVETG----KQIKKMAEHNSFVNSCCPSR 152 (347)
Q Consensus 78 d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~s~~~dg~i~iwd~~~~----~~~~~~~~~~~~v~~~~~~~ 152 (347)
...|+..++.+. ....+......+..|+|++....| ++-...+.|+.+++... .....+.........++...
T Consensus 403 ~~~Ir~i~l~~~--~~~~l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~ 480 (791)
T 3m0c_C 403 RHEVRKMTLDRS--EYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDW 480 (791)
T ss_dssp BSSEEEECTTSC--CCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEET
T ss_pred ccceeEeeccCC--cceeeecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeee
Confidence 345777666532 222333344567889999855555 45556688988888652 11112221223334556655
Q ss_pred CCCCEEEEEcCCCceEEEeCCCCCceeecC-CCCceEEEEEcCCCCeEEEEec--CCcEEEEeCCCCceEEEecCCCCce
Q 019006 153 RGPPLVVSGSDDGTAKLWDMRQRGAIQTFP-DKYQITAVSFSDASDKIYTGGI--DNDVKVWDLRKGEVSMTLQGHQDMI 229 (347)
Q Consensus 153 ~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~i 229 (347)
.+..++++-...++|.+.++........+. .......++++|....|+.... .+.|...++........+...-...
T Consensus 481 ~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P 560 (791)
T 3m0c_C 481 IHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWP 560 (791)
T ss_dssp TTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCE
T ss_pred cCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCc
Confidence 566788888888999999987554333332 2345789999998777776553 3679999886544433333333467
Q ss_pred eEEEECCCCCEEEEE-cCCCcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEEE-EeeCCCeEEEEeCCC
Q 019006 230 TGMSLSPDGSYLLTN-GMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVT-AGSSDRMVYIWDTTS 307 (347)
Q Consensus 230 ~~v~~~~~~~~l~t~-~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~-sgs~dg~i~vwd~~~ 307 (347)
+.|++++.+..|+.+ ...+.|...|+... .+ ...+.... .+ .....+++. +.+|+ +-...+.|...|..+
T Consensus 561 ~GLavD~~~~~LYwaD~~~~~I~~~d~dG~---~~-~~v~~~~~-~l-~~P~glav~--~~~lYwtD~~~~~I~~~dk~t 632 (791)
T 3m0c_C 561 NGITLDLLSGRLYWVDSKLHSISSIDVNGG---NR-KTILEDEK-RL-AHPFSLAVF--EDKVFWTDIINEAIFSANRLT 632 (791)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTSC---SC-EEEEECTT-TT-SSEEEEEEE--TTEEEEEETTTTEEEEEETTT
T ss_pred eEEEEecCCCeEEEEeCCCCcEEEEecCCC---ce-EEEecCCC-cc-CCCCEEEEe--CCEEEEEECCCCEEEEEeCCC
Confidence 899999876666655 44568888887531 11 11122110 11 123455543 33444 445667888888877
Q ss_pred ceeeEEec
Q 019006 308 RRILYKLP 315 (347)
Q Consensus 308 ~~~~~~~~ 315 (347)
++.+..+.
T Consensus 633 G~~~~~l~ 640 (791)
T 3m0c_C 633 GSDVNLLA 640 (791)
T ss_dssp CCCCEEEE
T ss_pred CcceEEee
Confidence 76655554
No 286
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.06 E-value=0.0041 Score=52.90 Aligned_cols=214 Identities=7% Similarity=-0.042 Sum_probs=125.8
Q ss_pred CeEEEEECCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCC----CCceeecCC-CCceEEEEEcCCC
Q 019006 122 KTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQ----RGAIQTFPD-KYQITAVSFSDAS 196 (347)
Q Consensus 122 g~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~----~~~~~~~~~-~~~v~~~~~~~~~ 196 (347)
..|+..|+...+....+. .......+.+.+.+..++++-...+.|..+++.. ......+.. ......+++++.+
T Consensus 10 ~~I~~i~~~~~~~~~~~~-~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~ 88 (316)
T 1ijq_A 10 HEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIH 88 (316)
T ss_dssp SSEEEEETTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTT
T ss_pred CeEEEEECCCcceEehhc-CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecC
Confidence 457788877655433222 2233445666665566777777788999998875 222222222 2356788888766
Q ss_pred CeEEE-EecCCcEEEEeCCCCceEEEecCCCCceeEEEECCCCCEEEEEcCC--CcEEEEeCCCCCCcCceeEEEecccc
Q 019006 197 DKIYT-GGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMD--CKLCIWDMRPYAPQNRCVKILEGHQH 273 (347)
Q Consensus 197 ~~l~~-~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~~d--~~i~~wd~~~~~~~~~~~~~~~~~~~ 273 (347)
+.++. -...+.|.++|+........+.........++++|.+.+|+.+... +.|...++.. .....+...
T Consensus 89 ~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG-----~~~~~~~~~-- 161 (316)
T 1ijq_A 89 SNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG-----VDIYSLVTE-- 161 (316)
T ss_dssp TEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS-----CCEEEEECS--
T ss_pred CeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCC-----CCeEEEEEC--
Confidence 66654 4567889999987544333333233457899999977766555432 6788887642 112222111
Q ss_pred ccccceEEEEECCCCCEEEEee-CCCeEEEEeCCCceeeEEec--CCccCeeeEEEcCCCCEEEEecCCCcEEee
Q 019006 274 NFEKNLLKCGWSPDGSKVTAGS-SDRMVYIWDTTSRRILYKLP--GHTGSVNESVFHATEPVIGSCSSDKQIYLG 345 (347)
Q Consensus 274 ~~~~~~~~~~~s~~g~~l~sgs-~dg~i~vwd~~~~~~~~~~~--~h~~~v~~~~~~~~~~~l~s~s~D~~i~i~ 345 (347)
. -.....++++|++..|..+. ..+.|..+|+.......... ..-.....+++. .+.++.+-...+.|...
T Consensus 162 ~-~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~V~~~ 234 (316)
T 1ijq_A 162 N-IQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSA 234 (316)
T ss_dssp S-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEE
T ss_pred C-CCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEE-CCEEEEEECCCCeEEEE
Confidence 1 13467889999887776554 56789999987533222222 122345677774 45666666666666654
No 287
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.05 E-value=0.0023 Score=54.55 Aligned_cols=183 Identities=9% Similarity=0.238 Sum_probs=117.8
Q ss_pred CEEEEEcCCCceEEEeCCCCCceeecCCCCceEEEEEcCC----CCe--EEEEe--c--CCcEEEEeCC--CCceEEEec
Q 019006 156 PLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDA----SDK--IYTGG--I--DNDVKVWDLR--KGEVSMTLQ 223 (347)
Q Consensus 156 ~~~~s~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~----~~~--l~~~~--~--dg~i~iwd~~--~~~~~~~~~ 223 (347)
.++++....+-+.+||+ .++.++.++. ..++.+..-|. ++. ++.++ . +++|.+|++. +++ ...+.
T Consensus 41 s~ii~t~k~~gL~Vydl-~G~~l~~~~~-g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~~i~ 117 (355)
T 3amr_A 41 SKLITTNKKSGLVVYSL-DGKMLHSYNT-GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQSMT 117 (355)
T ss_dssp CEEEEEETTTEEEEEET-TSCEEEEECC-SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EEECS
T ss_pred cEEEEEcCCCCEEEEcC-CCcEEEEccC-CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-eeecc
Confidence 45666667788999999 7888888765 55666665552 221 33333 3 5789999763 333 33331
Q ss_pred C------CC-CceeEEEE--CCC-CC-EEEEEcCCCcEEEEeCCCCC---CcCceeEEEeccccccccceEEEEECCCCC
Q 019006 224 G------HQ-DMITGMSL--SPD-GS-YLLTNGMDCKLCIWDMRPYA---PQNRCVKILEGHQHNFEKNLLKCGWSPDGS 289 (347)
Q Consensus 224 ~------~~-~~i~~v~~--~~~-~~-~l~t~~~d~~i~~wd~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~ 289 (347)
. .. ..+..+++ +|. +. ++++...+|.+..|++.... ...+.++.+.. ...+-.|...+...
T Consensus 118 ~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-----gsq~EgcvvDd~~g 192 (355)
T 3amr_A 118 DPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-----NSQTEGMAADDEYG 192 (355)
T ss_dssp CTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-----SSCEEEEEEETTTT
T ss_pred ccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-----CCCcceEEEcCCCC
Confidence 1 11 45677888 774 43 78888999999999985321 22334444432 23566788889999
Q ss_pred EEEEeeCCCeEEEEeCC-----CceeeEEec-CCc-cCeeeEEE--cCCCC--EEEEecCCCcEEeec
Q 019006 290 KVTAGSSDRMVYIWDTT-----SRRILYKLP-GHT-GSVNESVF--HATEP--VIGSCSSDKQIYLGE 346 (347)
Q Consensus 290 ~l~sgs~dg~i~vwd~~-----~~~~~~~~~-~h~-~~v~~~~~--~~~~~--~l~s~s~D~~i~i~~ 346 (347)
.|+.+-.+.-|..++.+ +++++..+. +|- ..+-.+++ .++++ +++|+-.+.+..++|
T Consensus 193 ~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vyd 260 (355)
T 3amr_A 193 RLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYD 260 (355)
T ss_dssp EEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEE
T ss_pred eEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEE
Confidence 99999999888888865 355665553 332 36778887 44444 555665677777765
No 288
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.03 E-value=0.00041 Score=66.57 Aligned_cols=195 Identities=11% Similarity=0.032 Sum_probs=106.3
Q ss_pred eeEeecC-CCCCCEEEEEcCCC----ceEEEeCCCC-CceeecCCCCceEEEEEcCCCCeEEEEecC-----CcEEEEeC
Q 019006 145 VNSCCPS-RRGPPLVVSGSDDG----TAKLWDMRQR-GAIQTFPDKYQITAVSFSDASDKIYTGGID-----NDVKVWDL 213 (347)
Q Consensus 145 v~~~~~~-~~~~~~~~s~~~d~----~i~iwd~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~iwd~ 213 (347)
+....++ +++..++++.+.+| +|+++|+.++ ..+... -......+.|+|+++.|+....+ ..|+.+++
T Consensus 176 ~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~-~~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~l 254 (751)
T 2xe4_A 176 VMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADK-VSGTNGEIVWGPDHTSLFYVTKDETLRENKVWRHVM 254 (751)
T ss_dssp EEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCC-EEEECSCCEECSSTTEEEEEEECTTCCEEEEEEEET
T ss_pred EeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcc-ccCceeeEEEecCCCEEEEEEECCCCCCCEEEEEEC
Confidence 4456778 77665555544443 4999999887 532110 01113467899999888766654 25888888
Q ss_pred CCCce--EEEec-CCCCceeEEEECCCCCEEEEEcC---CCcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCC
Q 019006 214 RKGEV--SMTLQ-GHQDMITGMSLSPDGSYLLTNGM---DCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPD 287 (347)
Q Consensus 214 ~~~~~--~~~~~-~~~~~i~~v~~~~~~~~l~t~~~---d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 287 (347)
.++.. ...+. ........+.|+|||++|+..+. ...|.++|+........ +..+.... .....+..|+.+
T Consensus 255 gt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~-~~~l~~~~---~~~~~s~~~~~g 330 (751)
T 2xe4_A 255 GKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNT-LEIVRPRE---KGVRYDVQMHGT 330 (751)
T ss_dssp TSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCC-EEESSCCC---TTCCEEEEEETT
T ss_pred CCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCce-eEEeecCC---CCceEEEeeeeC
Confidence 76542 22222 22345667899999998886552 34688888864311110 01121111 223444444443
Q ss_pred CCEEEEeeCC----CeEEEEeCCCceeeEE-ecCCcc--CeeeEEEcCCCCEEEEecCCCcEEee
Q 019006 288 GSKVTAGSSD----RMVYIWDTTSRRILYK-LPGHTG--SVNESVFHATEPVIGSCSSDKQIYLG 345 (347)
Q Consensus 288 g~~l~sgs~d----g~i~vwd~~~~~~~~~-~~~h~~--~v~~~~~~~~~~~l~s~s~D~~i~i~ 345 (347)
+.+++....+ ..|+.+|+.+...... +-.|.. .+..+.+. .+.++++...|+...|+
T Consensus 331 ~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~-~~~lv~~~~~~g~~~l~ 394 (751)
T 2xe4_A 331 SHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVR-SNYLVVAGRRAGLTRIW 394 (751)
T ss_dssp TEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEEC-SSEEEEEEEETTEEEEE
T ss_pred CEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEE-CCEEEEEEEeCCEEEEE
Confidence 4444444333 3677888765211122 223333 34556665 34566677777764443
No 289
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=98.00 E-value=0.005 Score=51.74 Aligned_cols=254 Identities=13% Similarity=0.124 Sum_probs=153.6
Q ss_pred CCcEEEEeccCCCeeeE-EEeCcccceeEEEEcCCCCEEEEecCCCeEEEEECCCCceeeeeeccCcceeEeecCCCCCC
Q 019006 78 DRDIFLWHVHGDCKNFM-VLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPP 156 (347)
Q Consensus 78 d~~v~~w~~~~~~~~~~-~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 156 (347)
+..|.+.|+.......+ ...+ -+.-.+|..+.|+.-. ..++.++|+++..+++.+.... .|.-+.|....
T Consensus 48 ~~~VvIiDl~n~~~~~Rrpi~A-----dsAIMnP~~~ViALra-g~~LQiFnletK~klks~~~~e-~VvfWkWis~~-- 118 (365)
T 2xzh_A 48 QAQVVIIDMNDPSNPIRRPISA-----DSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTD-DVTFWKWISLN-- 118 (365)
T ss_dssp EEEEEEEETTSTTSCEEEECCC-----SEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECSS-CEEEEEECSSS--
T ss_pred CCEEEEEECCCCCCcccccccc-----ceeeeCCCccEEEEec-CCeEEEechHHhhhhcceecCC-ccEEEEecCCC--
Confidence 33677888864333221 1111 2333578777666554 6889999999998888776554 44455555443
Q ss_pred EEEEEcCCCceEEEeCCC-CCceeecCC-----CCceEEEEEcCCCCeEEEEe---c----CCcEEEEeCCCCceEEEec
Q 019006 157 LVVSGSDDGTAKLWDMRQ-RGAIQTFPD-----KYQITAVSFSDASDKIYTGG---I----DNDVKVWDLRKGEVSMTLQ 223 (347)
Q Consensus 157 ~~~s~~~d~~i~iwd~~~-~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~---~----dg~i~iwd~~~~~~~~~~~ 223 (347)
.++-.+ +..+.-|++.. ..+.+.+.. ..+|.....+++.++++..+ . .|.+.+|..+.. ....++
T Consensus 119 ~L~lVT-~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ie 196 (365)
T 2xzh_A 119 TVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIE 196 (365)
T ss_dssp EEEEEE-SSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT-EEEEEC
T ss_pred eEEEEc-CCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccc-ccceee
Confidence 333332 35799999874 334443322 35788888899999776433 2 356788987644 456677
Q ss_pred CCCCceeEEEECC--CCCEEEE-Ec---CCCcEEEEeCCCC-CCc----CceeEEEeccccccccceEEEEECCCCCEEE
Q 019006 224 GHQDMITGMSLSP--DGSYLLT-NG---MDCKLCIWDMRPY-APQ----NRCVKILEGHQHNFEKNLLKCGWSPDGSKVT 292 (347)
Q Consensus 224 ~~~~~i~~v~~~~--~~~~l~t-~~---~d~~i~~wd~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~ 292 (347)
+|...-..+.+.. ....|++ +. ..+.+.+-++... ... .+.+..+-.. ....+-..++..|+....+.
T Consensus 197 Ghaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fpp-ea~~DFPVamqvs~kygviy 275 (365)
T 2xzh_A 197 GHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPP-EAQNDFPVAMQISEKHDVVF 275 (365)
T ss_dssp CSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCT-TCTTCCEEEEEEETTTTEEE
T ss_pred eeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCc-cccCCceEEEEecccCCEEE
Confidence 7754333222211 1112322 21 2258899988532 111 1111111111 11234466778889999999
Q ss_pred EeeCCCeEEEEeCCCceeeEEecCCccCeeeEEEcCCCCEEEEecCCCcEE
Q 019006 293 AGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIY 343 (347)
Q Consensus 293 sgs~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~ 343 (347)
.-+.-|.|++||++++.+++.-+=....|...+.+....-+......|.|.
T Consensus 276 viTK~G~ihlyDleTgt~i~~nrIS~d~iF~ta~~~~~~Gi~~Vnr~GqVl 326 (365)
T 2xzh_A 276 LITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVL 326 (365)
T ss_dssp EEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEEGGGTEEEEEETTCEEE
T ss_pred EEeCCcEEEEEEcccCcEEEEeccCCCceEEecccCCCCcEEEEcCCCEEE
Confidence 999999999999999999987666666776666666655555666776654
No 290
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.98 E-value=0.0075 Score=56.35 Aligned_cols=229 Identities=9% Similarity=0.053 Sum_probs=126.8
Q ss_pred CCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEe-cCCCeEEEEECCCCceeeee-eccCcceeEeecCCCCC
Q 019006 78 DRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISA-SPDKTLRAWDVETGKQIKKM-AEHNSFVNSCCPSRRGP 155 (347)
Q Consensus 78 d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~~dg~i~iwd~~~~~~~~~~-~~~~~~v~~~~~~~~~~ 155 (347)
...|+..++.+.......+...-.....|+|++.+..|+-+ ...+.|..++++.......+ .........++....+.
T Consensus 17 ~~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~ 96 (619)
T 3s94_A 17 RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGE 96 (619)
T ss_dssp SSBEEEECCC---------CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTT
T ss_pred cccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCC
Confidence 34566666654321122222233456789999866666544 45678888888654321222 22223455666666566
Q ss_pred CEEEEEcCCCceEEEeCCCCCceeec-CCCCceEEEEEcCCCCeEEEEec--CCcEEEEeCCCCceEEEecCCCCceeEE
Q 019006 156 PLVVSGSDDGTAKLWDMRQRGAIQTF-PDKYQITAVSFSDASDKIYTGGI--DNDVKVWDLRKGEVSMTLQGHQDMITGM 232 (347)
Q Consensus 156 ~~~~s~~~d~~i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~i~~v 232 (347)
.++++-...+.|.+.++......... ..-.....++++|..+.|+.... .+.|...++............-...+.|
T Consensus 97 ~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~Gl 176 (619)
T 3s94_A 97 KLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGL 176 (619)
T ss_dssp EEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEEEE
T ss_pred EEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCcEE
Confidence 77888788899999998755432222 23345678999998777766553 4677777775433322222233456889
Q ss_pred EECCCCCEEEEE-cCCCcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCCceee
Q 019006 233 SLSPDGSYLLTN-GMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRIL 311 (347)
Q Consensus 233 ~~~~~~~~l~t~-~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~ 311 (347)
++++++..|..+ ...+.|...|+.... ... ...+. . .....+++..+ ....+-...+.|...|..+++..
T Consensus 177 ald~~~~~LY~aD~~~~~I~~~~~dG~~--~~~--~~~~~-~---~~P~gi~~~~~-~ly~td~~~~~V~~~d~~tg~~~ 247 (619)
T 3s94_A 177 TLDYEEQKLYWADAKLNFIHKSNLDGTN--RQA--VVKGS-L---PHPFALTLFED-ILYWTDWSTHSILACNKYTGEGL 247 (619)
T ss_dssp EEETTTTEEEEEETTTCCEEEESSSCCE--EC---------------CCCEEESSS-EEEEECTTTCSEEEEESSSCCCC
T ss_pred EEEccCCEEEEEeCCCCeEEEecCCCCc--cEE--EEeCC-C---CCceEEEEeCC-EEEEecCCCCEEEEEECCCCccc
Confidence 999876665554 456788888875311 111 11100 0 11234455544 34445556778999998887655
Q ss_pred EEec
Q 019006 312 YKLP 315 (347)
Q Consensus 312 ~~~~ 315 (347)
..+.
T Consensus 248 ~~i~ 251 (619)
T 3s94_A 248 REIH 251 (619)
T ss_dssp EECC
T ss_pred EEEe
Confidence 5544
No 291
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.98 E-value=0.0088 Score=53.84 Aligned_cols=245 Identities=11% Similarity=0.062 Sum_probs=136.7
Q ss_pred cEEEEEECCC-C-CeEEEeeCCCcEEEEeccCCCeeeEEEeC---cccceeEEEE-------cCCCCEEEEecCCC----
Q 019006 59 AVYTMKFNPA-G-TVIASGSHDRDIFLWHVHGDCKNFMVLKG---HKNAILDLHW-------TTDGSQIISASPDK---- 122 (347)
Q Consensus 59 ~V~~v~~~~~-~-~~l~s~~~d~~v~~w~~~~~~~~~~~~~~---h~~~v~~~~~-------~~~~~~l~s~~~dg---- 122 (347)
....|+|+|. . .++++-...+.|++.|..+.. ....... .......++| ++++++|+.+...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~-v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~ 218 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRM-LSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGD 218 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTE-EEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCE-EEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcc
Confidence 5678999983 4 455555545667778775432 2112222 1235789999 99999666665543
Q ss_pred ---eEEEEECCC-Ccee-----eeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCC-------CCCc---------
Q 019006 123 ---TLRAWDVET-GKQI-----KKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMR-------QRGA--------- 177 (347)
Q Consensus 123 ---~i~iwd~~~-~~~~-----~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~-------~~~~--------- 177 (347)
.|.+.+... +... ..+.. ......++..+.+..++++-..++.|..+|+. ++..
T Consensus 219 ~~~~V~~i~r~~~G~~~~~~~~~~v~~-~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~ 297 (496)
T 3kya_A 219 ESPSVYIIKRNADGTFDDRSDIQLIAA-YKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNP 297 (496)
T ss_dssp GEEEEEEEECCTTSCCSTTSCEEEEEE-ESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCT
T ss_pred cCceEEEEecCCCCceeecccceeecc-CCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccc
Confidence 255665333 1211 11211 11223455667667788888888999999987 4432
Q ss_pred -----eeecCCCCceEEEEEcCCCCeEEEE-ecCCcEEEEeCC--CCce--EEEecCC---C------------Ccee-E
Q 019006 178 -----IQTFPDKYQITAVSFSDASDKIYTG-GIDNDVKVWDLR--KGEV--SMTLQGH---Q------------DMIT-G 231 (347)
Q Consensus 178 -----~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~iwd~~--~~~~--~~~~~~~---~------------~~i~-~ 231 (347)
+...+.......++|+|+++.|+.+ +..+.|+.++.. .+.. ...+.+. . .... .
T Consensus 298 g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~g 377 (496)
T 3kya_A 298 NTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQG 377 (496)
T ss_dssp TTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEE
T ss_pred cccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEE
Confidence 1122333456789999999965555 466789886643 3221 0112111 0 1123 3
Q ss_pred EEEC-------CCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEecccc--------------c------cccceEEEEE
Q 019006 232 MSLS-------PDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQH--------------N------FEKNLLKCGW 284 (347)
Q Consensus 232 v~~~-------~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~--------------~------~~~~~~~~~~ 284 (347)
++.. ++++++++-.....|+.++.. +. +..+.+... . .-.....+++
T Consensus 378 v~vd~~~~~~~~~g~lyVaD~~N~rIr~i~~~-----G~-v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIav 451 (496)
T 3kya_A 378 VFVKNPDYTGEEEYDFYFVDRLNFCVRKVTPE-----GI-VSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVY 451 (496)
T ss_dssp EEEECTTCCSSCCEEEEEEEGGGTEEEEECTT-----CB-EEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEE
T ss_pred EEEccccccccCCCeEEEEECCCCEEEEEeCC-----CC-EEEEecccccccccCccccccCCCCchhhhhcCCCcEEEE
Confidence 4443 456666666677788888732 22 233322210 0 0123567778
Q ss_pred CCC-CCEEEEeeCCCeEEEEeCCCceee
Q 019006 285 SPD-GSKVTAGSSDRMVYIWDTTSRRIL 311 (347)
Q Consensus 285 s~~-g~~l~sgs~dg~i~vwd~~~~~~~ 311 (347)
+++ |.+.++=+....|+.++++.....
T Consensus 452 d~~~g~lyVaD~~N~rIrki~~~~~~~~ 479 (496)
T 3kya_A 452 DDVKEMFYVHDQVGHTIRTISMEQEENV 479 (496)
T ss_dssp ETTTTEEEEEETTTTEEEEEEECCCC--
T ss_pred ECCCCEEEEEeCCCCEEEEEECCCCccc
Confidence 886 665566666677888877654443
No 292
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.93 E-value=0.0075 Score=51.31 Aligned_cols=216 Identities=11% Similarity=0.009 Sum_probs=122.6
Q ss_pred CCeEEEEECCCCce-eeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCcee-ec-CCCCceEEEEEcCCCC
Q 019006 121 DKTLRAWDVETGKQ-IKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQ-TF-PDKYQITAVSFSDASD 197 (347)
Q Consensus 121 dg~i~iwd~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~-~~-~~~~~v~~~~~~~~~~ 197 (347)
...|+..++..... .............+.+......++++-...+.|..+++....... .. ..-.....+++++.++
T Consensus 12 ~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g 91 (318)
T 3sov_A 12 RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGE 91 (318)
T ss_dssp EEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTT
T ss_pred cCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCC
Confidence 45677777765431 111111112233445555445677777777888888876553211 11 1223456788887666
Q ss_pred eEE-EEecCCcEEEEeCCCCceEEEecCCCCceeEEEECCCCCEEEEEc--CCCcEEEEeCCCCCCcCceeEEEeccccc
Q 019006 198 KIY-TGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNG--MDCKLCIWDMRPYAPQNRCVKILEGHQHN 274 (347)
Q Consensus 198 ~l~-~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~--~d~~i~~wd~~~~~~~~~~~~~~~~~~~~ 274 (347)
.|+ +-...+.|.++++........+.........+++.|.+.+|+.+. ..+.|...++... ....+-...
T Consensus 92 ~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~-----~~~~~~~~~-- 164 (318)
T 3sov_A 92 KLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGS-----SRFIIINSE-- 164 (318)
T ss_dssp EEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSC-----SCEEEECSS--
T ss_pred eEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCC-----CeEEEEECC--
Confidence 555 445667899999865433333333344578999998766666554 3567888876521 111121111
Q ss_pred cccceEEEEECCCCCEEEEe-eCCCeEEEEeCCCceeeEEecCCccCeeeEEEcCCCCEEEEecCCCcEEee
Q 019006 275 FEKNLLKCGWSPDGSKVTAG-SSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLG 345 (347)
Q Consensus 275 ~~~~~~~~~~s~~g~~l~sg-s~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~i~ 345 (347)
-.....++++|++..|..+ +..+.|+.+|+........+.+.......+++. .+.++.+-...+.|...
T Consensus 165 -l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~-~~~lywtd~~~~~V~~~ 234 (318)
T 3sov_A 165 -IYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLF-EDILYWTDWSTHSILAC 234 (318)
T ss_dssp -CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEE-TTEEEEEETTTTEEEEE
T ss_pred -CCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEe-CCEEEEEecCCCeEEEE
Confidence 1245788999987777655 456789999987543332233333455667774 34455555555666544
No 293
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.86 E-value=0.018 Score=53.81 Aligned_cols=229 Identities=10% Similarity=0.008 Sum_probs=134.8
Q ss_pred CCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEE-EecCCCeEEEEECCCCceeeeeeccCcceeEeecCCCCC
Q 019006 77 HDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQII-SASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGP 155 (347)
Q Consensus 77 ~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~ 155 (347)
....|+..++.+...........-.....|+|++.+..|+ +-..++.|+.++++.......+.........++....+.
T Consensus 13 ~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~ 92 (628)
T 4a0p_A 13 RRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGK 92 (628)
T ss_dssp ETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTT
T ss_pred eCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCC
Confidence 3456777777543221111111234578999998766665 445678899998875433222222212334455555556
Q ss_pred CEEEEEcCCCceEEEeCCCCCceeec-CCCCceEEEEEcCCCCeEEEEec--CCcEEEEeCCCCceEEEecCCCCceeEE
Q 019006 156 PLVVSGSDDGTAKLWDMRQRGAIQTF-PDKYQITAVSFSDASDKIYTGGI--DNDVKVWDLRKGEVSMTLQGHQDMITGM 232 (347)
Q Consensus 156 ~~~~s~~~d~~i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~i~~v 232 (347)
.++++-...+.|.+.++......... ..-.....++++|....|+.... .+.|...++.......... .-.....|
T Consensus 93 ~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~-~~~~P~Gl 171 (628)
T 4a0p_A 93 NLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVP-NVGRANGL 171 (628)
T ss_dssp EEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEEC-SCSSEEEE
T ss_pred EEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEEC-CCCCcceE
Confidence 67777777888999998654432222 23346789999997777776553 5678888876544332232 33457899
Q ss_pred EECCCCCEEEEE-cCCCcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCCceee
Q 019006 233 SLSPDGSYLLTN-GMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRIL 311 (347)
Q Consensus 233 ~~~~~~~~l~t~-~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~ 311 (347)
+++++++.|..+ ...+.|...|+.... + +.+... . .....+++.. +....+-...+.|...|..+++..
T Consensus 172 alD~~~~~LY~aD~~~~~I~~~d~dG~~---~--~v~~~~---l-~~P~glav~~-~~ly~tD~~~~~I~~~dk~tg~~~ 241 (628)
T 4a0p_A 172 TIDYAKRRLYWTDLDTNLIESSNMLGLN---R--EVIADD---L-PHPFGLTQYQ-DYIYWTDWSRRSIERANKTSGQNR 241 (628)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSCS---C--EEEEEC---C-SCEEEEEEET-TEEEEEETTTTEEEEEETTTCCSC
T ss_pred EEccccCEEEEEECCCCEEEEEcCCCCc---e--EEeecc---C-CCceEEEEEC-CEEEEecCCCCEEEEEECCCCCce
Confidence 999976666555 456789999986421 1 122211 1 1234555544 344445556788999998777655
Q ss_pred EEecC
Q 019006 312 YKLPG 316 (347)
Q Consensus 312 ~~~~~ 316 (347)
..+..
T Consensus 242 ~~l~~ 246 (628)
T 4a0p_A 242 TIIQG 246 (628)
T ss_dssp EEEEC
T ss_pred EEEec
Confidence 44443
No 294
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.82 E-value=0.015 Score=51.27 Aligned_cols=215 Identities=8% Similarity=-0.043 Sum_probs=127.5
Q ss_pred CCeEEEEECCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCC----CceeecC-CCCceEEEEEcCC
Q 019006 121 DKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQR----GAIQTFP-DKYQITAVSFSDA 195 (347)
Q Consensus 121 dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~----~~~~~~~-~~~~v~~~~~~~~ 195 (347)
...|+..++........ ......+..+.+.+....++++-...+.|..+++... ....... .......+++++.
T Consensus 91 ~~~I~~i~l~~~~~~~~-~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~ 169 (400)
T 3p5b_L 91 RHEVRKMTLDRSEYTSL-IPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI 169 (400)
T ss_dssp TTEEEEECTTSCSCEEE-ECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETT
T ss_pred cceeEEEccCCcceeEe-ccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEec
Confidence 46778878765543322 2233445566666666667777777788888887652 1222222 2345778899886
Q ss_pred CCeEEE-EecCCcEEEEeCCCCceEEEecCCCCceeEEEECCCCCEEEEEcC--CCcEEEEeCCCCCCcCceeEEEeccc
Q 019006 196 SDKIYT-GGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGM--DCKLCIWDMRPYAPQNRCVKILEGHQ 272 (347)
Q Consensus 196 ~~~l~~-~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~~--d~~i~~wd~~~~~~~~~~~~~~~~~~ 272 (347)
++.|+. -...+.|.+.++........+.........|++.|.+.+|+.... .+.|...++... ....+...
T Consensus 170 ~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~-----~~~~~~~~- 243 (400)
T 3p5b_L 170 HSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV-----DIYSLVTE- 243 (400)
T ss_dssp TTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSC-----SCEEEECS-
T ss_pred CCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCC-----ccEEEEEC-
Confidence 565554 456778999998765444444333445789999997666665542 367888887531 11112111
Q ss_pred cccccceEEEEECCCCCEEEEee-CCCeEEEEeCCCceeeEEecC--CccCeeeEEEcCCCCEEEEecCCCcEEee
Q 019006 273 HNFEKNLLKCGWSPDGSKVTAGS-SDRMVYIWDTTSRRILYKLPG--HTGSVNESVFHATEPVIGSCSSDKQIYLG 345 (347)
Q Consensus 273 ~~~~~~~~~~~~s~~g~~l~sgs-~dg~i~vwd~~~~~~~~~~~~--h~~~v~~~~~~~~~~~l~s~s~D~~i~i~ 345 (347)
. -.....+++++++..|+.+. ..+.|+.+|+........+.. .-.....+++ ..+.++.+-...+.|...
T Consensus 244 -~-l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v-~~~~lywtd~~~~~V~~~ 316 (400)
T 3p5b_L 244 -N-IQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAV-FEDKVFWTDIINEAIFSA 316 (400)
T ss_dssp -S-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEE-ETTEEEEEESSSCSEEEE
T ss_pred -C-CCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEE-eCCEEEEecCCCCeEEEE
Confidence 1 13467889999888877664 567899999875443322222 2234456666 344566566666666554
No 295
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.81 E-value=0.0035 Score=53.04 Aligned_cols=158 Identities=9% Similarity=0.121 Sum_probs=101.7
Q ss_pred EEEEEcCCCCeEEEEe-cCCcEEEEeCCCCceEE-EecC----CC--CceeEEEE---CCCCCEEEEEc-----------
Q 019006 188 TAVSFSDASDKIYTGG-IDNDVKVWDLRKGEVSM-TLQG----HQ--DMITGMSL---SPDGSYLLTNG----------- 245 (347)
Q Consensus 188 ~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~-~~~~----~~--~~i~~v~~---~~~~~~l~t~~----------- 245 (347)
.+..|++....|+.++ ..++|..||...+.... .+.+ .. ..+..|.| .|+++.+++..
T Consensus 16 E~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~ 95 (334)
T 2p9w_A 16 EDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQS 95 (334)
T ss_dssp SCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCC
T ss_pred cCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccccc
Confidence 4578887777777766 78999999987554322 2222 11 13578999 68877777543
Q ss_pred --CCCcEEEEeCC---CCCCcCceeEEEeccccc-------cccceEEEEECCCCCEEEEeeCC-CeEEEEeCCCceeeE
Q 019006 246 --MDCKLCIWDMR---PYAPQNRCVKILEGHQHN-------FEKNLLKCGWSPDGSKVTAGSSD-RMVYIWDTTSRRILY 312 (347)
Q Consensus 246 --~d~~i~~wd~~---~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~s~~g~~l~sgs~d-g~i~vwd~~~~~~~~ 312 (347)
.+..+..+|+. +.+.. ...-+...... ....+..++..++|+.-++++.. +.|..++........
T Consensus 96 ~~g~~~v~~~Dl~~~~tg~~~--~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~~~~ 173 (334)
T 2p9w_A 96 SHGASSFHSFNLPLSENSKPV--WSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGKTVST 173 (334)
T ss_dssp SSSCCEEEEEESSCCTTCCCS--EEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSCCEEE
T ss_pred cCCCCEEEEEcCCcCCCCCEE--EEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCCEEee
Confidence 26779999987 33221 11111111100 11246788899999999999888 899998877553321
Q ss_pred Ee-c----CCccCeeeEEEcCCCCEEEEecCCCcEEeecC
Q 019006 313 KL-P----GHTGSVNESVFHATEPVIGSCSSDKQIYLGEI 347 (347)
Q Consensus 313 ~~-~----~h~~~v~~~~~~~~~~~l~s~s~D~~i~i~~~ 347 (347)
.. . ......+.++++|++..|+....+|.+.-+|+
T Consensus 174 ~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~ 213 (334)
T 2p9w_A 174 FAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDV 213 (334)
T ss_dssp EEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEEC
T ss_pred eeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcC
Confidence 11 1 11223679999999988887777998887774
No 296
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.79 E-value=0.022 Score=54.62 Aligned_cols=199 Identities=12% Similarity=-0.015 Sum_probs=115.2
Q ss_pred cccEEEEEECCCCC-eEEEeeCCCcEEEEeccCCC---eeeEEEeCcccceeEEEEcCCCCEEE-EecCCCeEEEEECCC
Q 019006 57 QSAVYTMKFNPAGT-VIASGSHDRDIFLWHVHGDC---KNFMVLKGHKNAILDLHWTTDGSQII-SASPDKTLRAWDVET 131 (347)
Q Consensus 57 ~~~V~~v~~~~~~~-~l~s~~~d~~v~~w~~~~~~---~~~~~~~~h~~~v~~~~~~~~~~~l~-s~~~dg~i~iwd~~~ 131 (347)
...+.+|+|.+.+. ++++-...+.|+.+++.+.. .....+.........|++.+.+..|+ +-...+.|.+.+++.
T Consensus 423 ~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG 502 (791)
T 3m0c_C 423 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG 502 (791)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCC
Confidence 44567888988544 45555556778888876421 11223332334567888887665554 556678999999875
Q ss_pred CceeeeeeccCcceeEeecCCCCCCEEEEEcCC-CceEEEeCCCCCceeecCC-CCceEEEEEcCCCCeEEEEe-cCCcE
Q 019006 132 GKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDD-GTAKLWDMRQRGAIQTFPD-KYQITAVSFSDASDKIYTGG-IDNDV 208 (347)
Q Consensus 132 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d-~~i~iwd~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~-~dg~i 208 (347)
......+.........++..+..+.++++-... +.|...++........+.. -.....|++++..+.|+.+. ..+.|
T Consensus 503 ~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I 582 (791)
T 3m0c_C 503 VKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSI 582 (791)
T ss_dssp SSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEE
T ss_pred CeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcE
Confidence 443222222233355666666655566664333 6788888765443333332 24688999998877777664 45679
Q ss_pred EEEeCCCCceEEEecCC--CCceeEEEECCCCCEEEEEcCCCcEEEEeCC
Q 019006 209 KVWDLRKGEVSMTLQGH--QDMITGMSLSPDGSYLLTNGMDCKLCIWDMR 256 (347)
Q Consensus 209 ~iwd~~~~~~~~~~~~~--~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~ 256 (347)
..+++........+... .....+|++.. ++.+++-...+.|...|..
T Consensus 583 ~~~d~dG~~~~~v~~~~~~l~~P~glav~~-~~lYwtD~~~~~I~~~dk~ 631 (791)
T 3m0c_C 583 SSIDVNGGNRKTILEDEKRLAHPFSLAVFE-DKVFWTDIINEAIFSANRL 631 (791)
T ss_dssp EEEETTSCSCEEEEECTTTTSSEEEEEEET-TEEEEEETTTTEEEEEETT
T ss_pred EEEecCCCceEEEecCCCccCCCCEEEEeC-CEEEEEECCCCEEEEEeCC
Confidence 99998654433333221 12344566532 3344444455677777754
No 297
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.71 E-value=0.0093 Score=51.35 Aligned_cols=234 Identities=13% Similarity=0.217 Sum_probs=120.6
Q ss_pred ceeEEEEcCCCCEEEEec------------CCCeEEEEECCCC-ceeeeeeccC-------cceeEeecCC--CCC-CEE
Q 019006 102 AILDLHWTTDGSQIISAS------------PDKTLRAWDVETG-KQIKKMAEHN-------SFVNSCCPSR--RGP-PLV 158 (347)
Q Consensus 102 ~v~~~~~~~~~~~l~s~~------------~dg~i~iwd~~~~-~~~~~~~~~~-------~~v~~~~~~~--~~~-~~~ 158 (347)
...++...++|..+++++ .+|.|.++|.++. .....+.... -....+.... ++. .++
T Consensus 51 G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~ 130 (355)
T 3sre_A 51 GSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLL 130 (355)
T ss_dssp CCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEE
T ss_pred CcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEE
Confidence 345666677665444442 6899999998742 1122221111 1111222212 222 244
Q ss_pred EEEcC--CCceEEEeCCCCCc----eeecCC--CCceEEEEEcCCCCeEEEEe-----------------cCCcEEEEeC
Q 019006 159 VSGSD--DGTAKLWDMRQRGA----IQTFPD--KYQITAVSFSDASDKIYTGG-----------------IDNDVKVWDL 213 (347)
Q Consensus 159 ~s~~~--d~~i~iwd~~~~~~----~~~~~~--~~~v~~~~~~~~~~~l~~~~-----------------~dg~i~iwd~ 213 (347)
+.-.. +.++.+|++..... +..+.+ -...+.+.+.+++.+.++.. ..|.|+-+|.
T Consensus 131 Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~ 210 (355)
T 3sre_A 131 VVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP 210 (355)
T ss_dssp EEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT
T ss_pred EEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC
Confidence 44333 46777777654322 222332 23578899999887666543 1245655654
Q ss_pred CCCceEEEecCCCCceeEEEECCCCCEEEEE-cCCCcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECC-CCCEE
Q 019006 214 RKGEVSMTLQGHQDMITGMSLSPDGSYLLTN-GMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSP-DGSKV 291 (347)
Q Consensus 214 ~~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~-~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-~g~~l 291 (347)
++...... .-..-+.++|+|+++.|+.+ +..+.|..||+..... ....+.+. .....-.++..+ +|.+.
T Consensus 211 --~~~~~~~~-~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~-l~~~~~~~-----~~g~PDGi~vD~e~G~lw 281 (355)
T 3sre_A 211 --NDVRVVAE-GFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWT-LTPLRVLS-----FDTLVDNISVDPVTGDLW 281 (355)
T ss_dssp --TCCEEEEE-EESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSC-EEEEEEEE-----CSSEEEEEEECTTTCCEE
T ss_pred --CeEEEeec-CCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCc-EecCEEEe-----CCCCCceEEEeCCCCcEE
Confidence 33222222 22356899999999877665 4567999999863211 11112221 123455677888 59888
Q ss_pred EEeeCC-CeEEEEeCC--CceeeEEecC---CccCeeeEEEcCCCCEEEEec----CCCcEEee
Q 019006 292 TAGSSD-RMVYIWDTT--SRRILYKLPG---HTGSVNESVFHATEPVIGSCS----SDKQIYLG 345 (347)
Q Consensus 292 ~sgs~d-g~i~vwd~~--~~~~~~~~~~---h~~~v~~~~~~~~~~~l~s~s----~D~~i~i~ 345 (347)
+++..+ +.|..|+.. .+..+.++.. -...+.. .|..+++.+..++ .++.++|.
T Consensus 282 va~~~~g~~v~~~~P~~~~~s~v~rI~~~~~~~~~v~~-v~~ddG~~l~~~T~a~~~~g~L~iG 344 (355)
T 3sre_A 282 VGCHPNGMRIFFYDAENPPGSEVLRIQDILSEEPKVTV-VYAENGTVLQGSTVAAVYKGKLLIG 344 (355)
T ss_dssp EEEESCHHHHHSCCTTSCCCEEEEEEECTTSSSCEEEE-EEEECSSSCCSEEEEEEETTEEEEE
T ss_pred EEecCCceEEEEECCCCCCCCEEEEEEccCCCCcEEEE-EEEcCCCEEEeeEEEEEECCEEEEE
Confidence 766544 455556654 2445555542 1223333 3555665433222 35555553
No 298
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.60 E-value=0.028 Score=48.48 Aligned_cols=228 Identities=11% Similarity=0.091 Sum_probs=113.3
Q ss_pred cccEEEEEECCCCCeEEEeeCCCcEEEEeccCCCeeeEEEe---CcccceeEEEEcCC---CCEEEEecC-C-----CeE
Q 019006 57 QSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLK---GHKNAILDLHWTTD---GSQIISASP-D-----KTL 124 (347)
Q Consensus 57 ~~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~---~h~~~v~~~~~~~~---~~~l~s~~~-d-----g~i 124 (347)
-.....|+|.|+|+++++ ..+|.|++++ .+....+..+. ........|+|+|+ +..|+.+.. + ..|
T Consensus 30 l~~P~~ia~~pdG~l~V~-e~~g~I~~i~-~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v 107 (352)
T 2ism_A 30 LEVPWALAFLPDGGMLIA-ERPGRIRLFR-EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQV 107 (352)
T ss_dssp CSCEEEEEECTTSCEEEE-ETTTEEEEEE-TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEE
T ss_pred CCCceEEEEcCCCeEEEE-eCCCeEEEEE-CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEE
Confidence 446789999999986654 5669999988 43322222111 12346789999998 555554433 2 567
Q ss_pred EEEECCCCce-----e-eeeec---cCcceeEeecCCCCCCEEEEEcCC-------------CceEEEeCCCCC------
Q 019006 125 RAWDVETGKQ-----I-KKMAE---HNSFVNSCCPSRRGPPLVVSGSDD-------------GTAKLWDMRQRG------ 176 (347)
Q Consensus 125 ~iwd~~~~~~-----~-~~~~~---~~~~v~~~~~~~~~~~~~~s~~~d-------------~~i~iwd~~~~~------ 176 (347)
..++...+.. + ..+.. .......+.+.+++ .+.++-+.. +.|.-++....-
T Consensus 108 ~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG-~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf 186 (352)
T 2ism_A 108 VRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDG-MLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPF 186 (352)
T ss_dssp EEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTS-CEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTT
T ss_pred EEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCC-CEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCcc
Confidence 7777764321 1 11220 01122356666665 455543221 344444443200
Q ss_pred ------ceeecC-CCCceEEEEEcCCCCeEEEEec-CCc--------EEEEeCCCCc------------------eEEEe
Q 019006 177 ------AIQTFP-DKYQITAVSFSDASDKIYTGGI-DND--------VKVWDLRKGE------------------VSMTL 222 (347)
Q Consensus 177 ------~~~~~~-~~~~v~~~~~~~~~~~l~~~~~-dg~--------i~iwd~~~~~------------------~~~~~ 222 (347)
....+. .......++|+|+...|+++.. .+. |.+.. .+. ....+
T Consensus 187 ~~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~--~G~nyGwp~~~g~~~~~~~~~p~~~~ 264 (352)
T 2ism_A 187 LGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIV--PGGNYGWPRVVGRGNDPRYRDPLYFW 264 (352)
T ss_dssp TTCTTSCTTEEEECCSEECCCEECTTTCCEEEEEECC------CCCEEEEEC--TTCBCCTTTCCSCCCCTTSCCCSEEC
T ss_pred cCCCCCCccEEEEcCCCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEec--cCCcCCCCcccCCCCCCCCcCCeEec
Confidence 000000 0112566789984444544332 222 33322 221 12222
Q ss_pred cCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCce--eEEEeccccccccceEEEEECCCCCEEEEee
Q 019006 223 QGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRC--VKILEGHQHNFEKNLLKCGWSPDGSKVTAGS 295 (347)
Q Consensus 223 ~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs 295 (347)
..| .....++| .+|..+++.-..+.|...++......... ...+- .. ...+..+++.|||.+.++..
T Consensus 265 ~~~-~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~---~~-~~rp~~v~~~pdG~lyv~~~ 333 (352)
T 2ism_A 265 PQG-FPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETAL---SG-FGRLREVQVGPDGALYVTTS 333 (352)
T ss_dssp TTC-CCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEE---ES-SCCEEEEEECTTSCEEEEEC
T ss_pred CCC-CCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheec---cc-CCCeeEEEECCCCcEEEEEe
Confidence 222 23567777 45666666666677777776532110000 11111 01 23578888999997766654
No 299
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.60 E-value=0.048 Score=50.93 Aligned_cols=280 Identities=7% Similarity=-0.002 Sum_probs=145.5
Q ss_pred ccEEEEEECCCCC-eEEEeeCCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEecC--CCeEEEEECCCCce
Q 019006 58 SAVYTMKFNPAGT-VIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASP--DKTLRAWDVETGKQ 134 (347)
Q Consensus 58 ~~V~~v~~~~~~~-~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~--dg~i~iwd~~~~~~ 134 (347)
.....|++.+.+. +.++-...+.|.+.++.+..... .....-.....|++.|.+.+|+-... .+.|...+++....
T Consensus 84 ~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~-l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~ 162 (619)
T 3s94_A 84 LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKV-LFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSR 162 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE-EECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSC
T ss_pred CCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEEE-EEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCce
Confidence 5688999998655 55555567889999987654322 22233345678899987666655443 45666666654322
Q ss_pred eeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeecC-CCCceEEEEEcCCCCeEEEEecCCcEEEEeC
Q 019006 135 IKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFP-DKYQITAVSFSDASDKIYTGGIDNDVKVWDL 213 (347)
Q Consensus 135 ~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~ 213 (347)
.......-.....++..+....++++-...+.|...|+.......... .......+++..+ ..+++-...+.|...|.
T Consensus 163 ~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~-~ly~td~~~~~V~~~d~ 241 (619)
T 3s94_A 163 FIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFED-ILYWTDWSTHSILACNK 241 (619)
T ss_dssp EEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEEESSS-EEEEECTTTCSEEEEES
T ss_pred EEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEeCC-EEEEecCCCCEEEEEEC
Confidence 211212223344566666666677777777888888876433222111 1112345566544 33334445678888888
Q ss_pred CCCceEEEecCCCCceeE-------------------------EEE-----------CCCCC---------------EEE
Q 019006 214 RKGEVSMTLQGHQDMITG-------------------------MSL-----------SPDGS---------------YLL 242 (347)
Q Consensus 214 ~~~~~~~~~~~~~~~i~~-------------------------v~~-----------~~~~~---------------~l~ 242 (347)
.+++....+........+ +++ +|.|- +|+
T Consensus 242 ~tg~~~~~i~~~~~~p~~i~v~~~~~qp~~~n~C~~~ng~Cs~lCl~~~~~~~~~C~C~~g~~l~~d~~~C~~~~~~~Ll 321 (619)
T 3s94_A 242 YTGEGLREIHSDIFSPMDIHAFSQQRQPNATNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCKDGATELLL 321 (619)
T ss_dssp SSCCCCEECCSCCCCCSEEEECCGGGSCCCCCTTTTTGGGCSSEEEECSSTTSEEEECCTTCCBCTTSSCBCSSCSEEEE
T ss_pred CCCcccEEEecCCCCCcEEEEEccccCCCccccccCCCCcccceEECCCCCCCceEeCCchheecccCcccCCCCceEEE
Confidence 766533322111101111 111 11110 122
Q ss_pred EEcCCCcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEEEEe-eCCCeEEEEeCCCceeeEEecCCccCe
Q 019006 243 TNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAG-SSDRMVYIWDTTSRRILYKLPGHTGSV 321 (347)
Q Consensus 243 t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sg-s~dg~i~vwd~~~~~~~~~~~~h~~~v 321 (347)
.+ ..+.|+..++...... .. .+.. .. -..+..++|.+.+..|+.+ ...+.|+.++.........+...-...
T Consensus 322 ~~-~~~~i~~i~l~~~~~~-~~--~~~~--~~-l~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p 394 (619)
T 3s94_A 322 LA-RRTDLRRISLDTPDFT-DI--VLQL--ED-IRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHP 394 (619)
T ss_dssp EE-ESSCEEEEESSSTTCC-CE--ECCC--SC-CSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCC
T ss_pred EE-cccceEEEecCCCccc-ee--EEec--cc-cCccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCCCCc
Confidence 11 1223444444321110 00 0000 00 1246778898866666554 457789999887644333333333567
Q ss_pred eeEEEcCC-CCEEEEecCCCcEEeec
Q 019006 322 NESVFHAT-EPVIGSCSSDKQIYLGE 346 (347)
Q Consensus 322 ~~~~~~~~-~~~l~s~s~D~~i~i~~ 346 (347)
..+++... +.+..+-+..+.|.+.+
T Consensus 395 ~GlAvD~~~~~lY~tD~~~~~I~v~~ 420 (619)
T 3s94_A 395 DGIAVDWVARNLYWTDTGTDRIEVTR 420 (619)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred CceEEecccCcEEEEeCCCCcEEEEe
Confidence 88999864 44555655566666554
No 300
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.59 E-value=0.032 Score=48.87 Aligned_cols=254 Identities=12% Similarity=0.130 Sum_probs=155.1
Q ss_pred CCcEEEEeccCCCeeeE-EEeCcccceeEEEEcCCCCEEEEecCCCeEEEEECCCCceeeeeeccCcceeEeecCCCCCC
Q 019006 78 DRDIFLWHVHGDCKNFM-VLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPP 156 (347)
Q Consensus 78 d~~v~~w~~~~~~~~~~-~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 156 (347)
+..|.+-|+.......+ ...+ -+.-.+|..+.|+.-. ..++.|+|+++...++.+......+ -+.|....
T Consensus 47 ~~~vvIiDl~~~~~~~rrpi~A-----dsAIMnP~~~iiALra-g~~lQiFnle~K~klks~~~~e~Vv-fWkWis~~-- 117 (494)
T 1bpo_A 47 QAQVVIIDMNDPSNPIRRPISA-----DSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVT-FWKWISLN-- 117 (494)
T ss_dssp CCEEEEEETTSTTSCEEEECCC-----SEEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECSSCCC-EEEEEETT--
T ss_pred CCeEEEEECCCCCcceeccccc-----ceeeeCCCCcEEEEec-CCeEEEEchHHhhhhcceecCCCce-EEEecCCC--
Confidence 34677888864333221 1111 2334677777666554 7899999999988887776555443 44444332
Q ss_pred EEEEEcCCCceEEEeCCC-CCceeecCC-----CCceEEEEEcCCCCeEEEEe-------cCCcEEEEeCCCCceEEEec
Q 019006 157 LVVSGSDDGTAKLWDMRQ-RGAIQTFPD-----KYQITAVSFSDASDKIYTGG-------IDNDVKVWDLRKGEVSMTLQ 223 (347)
Q Consensus 157 ~~~s~~~d~~i~iwd~~~-~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~-------~dg~i~iwd~~~~~~~~~~~ 223 (347)
.++-. .+..|.-|++.. ..+.+.+.. ..+|.....+++.++++..+ -.|.+.+|..+.. ....+.
T Consensus 118 ~l~lV-T~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ie 195 (494)
T 1bpo_A 118 TVALV-TDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIE 195 (494)
T ss_dssp EEEEE-CSSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTC-CEEEEC
T ss_pred eEEEE-cCCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccc-ccchhe
Confidence 33333 346799999864 234443322 35788888899999876433 2356888987644 456677
Q ss_pred CCCCceeEEEECCCC--CEEEE-EcC---CCcEEEEeCCCC-CCc----CceeEEEeccccccccceEEEEECCCCCEEE
Q 019006 224 GHQDMITGMSLSPDG--SYLLT-NGM---DCKLCIWDMRPY-APQ----NRCVKILEGHQHNFEKNLLKCGWSPDGSKVT 292 (347)
Q Consensus 224 ~~~~~i~~v~~~~~~--~~l~t-~~~---d~~i~~wd~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~ 292 (347)
+|...-..+.+..+. ..|++ +.. .+.+.+-++... ... .+.+...-.. ....+-..++..++....+.
T Consensus 196 Ghaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fpp-e~~~DFPvamqvs~kygviy 274 (494)
T 1bpo_A 196 GHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPP-EAQNDFPVAMQISEKHDVVF 274 (494)
T ss_dssp CSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCT-TSTTCCEEEEEEETTTTEEE
T ss_pred eeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCc-ccccCceeEEEecccCCEEE
Confidence 776544333332111 12222 222 368999988542 111 1111111111 11234456778899999999
Q ss_pred EeeCCCeEEEEeCCCceeeEEecCCccCeeeEEEcCCCCEEEEecCCCcEE
Q 019006 293 AGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIY 343 (347)
Q Consensus 293 sgs~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~ 343 (347)
.-+.-|.|++||+.++.+++.-+-....|...+.+....-+......|.|.
T Consensus 275 viTK~G~i~lyDleTgt~i~~nrIs~~~iF~t~~~~~~~Gi~~Vnr~GqVl 325 (494)
T 1bpo_A 275 LITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVL 325 (494)
T ss_dssp EEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEETTCEEE
T ss_pred EEecCceEEEEecccceeeeeecccCCceEEecccCCCCcEEEEccCceEE
Confidence 999999999999999999987666666777667766666666666777654
No 301
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.52 E-value=0.0041 Score=59.05 Aligned_cols=216 Identities=7% Similarity=-0.039 Sum_probs=117.7
Q ss_pred CCeEEEEECCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCC----CCceeecCC-CCceEEEEEcCC
Q 019006 121 DKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQ----RGAIQTFPD-KYQITAVSFSDA 195 (347)
Q Consensus 121 dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~----~~~~~~~~~-~~~v~~~~~~~~ 195 (347)
.+.|+..++........+.. ...+..+.+.+....++++-...+.|+.+++.. ......+.. ......+++++.
T Consensus 385 ~~~I~~id~~~~~~~~~~~~-~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~ 463 (699)
T 1n7d_A 385 RHEVRKMTLDRSEYTSLIPN-LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI 463 (699)
T ss_dssp TTC-CEECTTSCCEECCSCC-CTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCS
T ss_pred ccceEEEeCCCCcceeeecc-CcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEee
Confidence 35677777766543322221 222334455554555666666678899998875 222222221 123556788866
Q ss_pred CCeEEEE-ecCCcEEEEeCCCCceEEEecCCCCceeEEEECCCCCEEEEEcC--CCcEEEEeCCCCCCcCceeEEEeccc
Q 019006 196 SDKIYTG-GIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGM--DCKLCIWDMRPYAPQNRCVKILEGHQ 272 (347)
Q Consensus 196 ~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~~--d~~i~~wd~~~~~~~~~~~~~~~~~~ 272 (347)
++.|+.+ ...+.|.++++........+.........|+++|.+.+|+.+.. .+.|..+++.... ...+....
T Consensus 464 ~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~-----~~~l~~~~ 538 (699)
T 1n7d_A 464 HSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD-----IYSLVTEN 538 (699)
T ss_dssp SSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCC-----CCEESCSS
T ss_pred CCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCC-----eeEEEeCC
Confidence 5555544 45678999998755433333322344678999997665555443 2677777764211 11111111
Q ss_pred cccccceEEEEECCCCCEEEE-eeCCCeEEEEeCCCceeeEEec--CCccCeeeEEEcCCCCEEEEecCCCcEEeec
Q 019006 273 HNFEKNLLKCGWSPDGSKVTA-GSSDRMVYIWDTTSRRILYKLP--GHTGSVNESVFHATEPVIGSCSSDKQIYLGE 346 (347)
Q Consensus 273 ~~~~~~~~~~~~s~~g~~l~s-gs~dg~i~vwd~~~~~~~~~~~--~h~~~v~~~~~~~~~~~l~s~s~D~~i~i~~ 346 (347)
-.....++|+|++..|+. -+..+.|+++++........+. +.-.....+++..+ .++.+....+.|...+
T Consensus 539 ---l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d 611 (699)
T 1n7d_A 539 ---IQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSAN 611 (699)
T ss_dssp ---CSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEE
T ss_pred ---CCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEE
Confidence 123456889998665554 4566789999986543332222 11223445566544 5666666666776543
No 302
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.50 E-value=0.035 Score=46.98 Aligned_cols=201 Identities=6% Similarity=0.076 Sum_probs=116.8
Q ss_pred ceeEEEEcCCCCEEEEec-CCCeEEEEECCCCceeeeeecc-----Cc--ceeEeec---CCCCCCEEEEEc--------
Q 019006 102 AILDLHWTTDGSQIISAS-PDKTLRAWDVETGKQIKKMAEH-----NS--FVNSCCP---SRRGPPLVVSGS-------- 162 (347)
Q Consensus 102 ~v~~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~-----~~--~v~~~~~---~~~~~~~~~s~~-------- 162 (347)
--.+.+|++....+..++ ..++|..|+...+......... .. ....+.+ .+. ..++++..
T Consensus 14 yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~-grL~vv~~~~~af~~~ 92 (334)
T 2p9w_A 14 TPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNS-KRLFAVMKNAKSFNFA 92 (334)
T ss_dssp CCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSC-CEEEEEEEETTTTCTT
T ss_pred CCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCC-CcEEEEEccccccccc
Confidence 345678987555555554 7899999998755433222111 11 2234455 244 44555333
Q ss_pred -----CCCceEEEeCC---CCCceeecCC-------------C-CceEEEEEcCCCCeEEEEecC-CcEEEEeCCCCceE
Q 019006 163 -----DDGTAKLWDMR---QRGAIQTFPD-------------K-YQITAVSFSDASDKIYTGGID-NDVKVWDLRKGEVS 219 (347)
Q Consensus 163 -----~d~~i~iwd~~---~~~~~~~~~~-------------~-~~v~~~~~~~~~~~l~~~~~d-g~i~iwd~~~~~~~ 219 (347)
.+..+..+|+. +++.+....- . .....++.+++|+..++++.- +.|..++.......
T Consensus 93 g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~~~ 172 (334)
T 2p9w_A 93 DQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGKTVS 172 (334)
T ss_dssp SCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSCCEE
T ss_pred ccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCCEEe
Confidence 25778899998 6665433221 1 247899999999999988888 88888876533222
Q ss_pred EEe-cC----CCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEe-ccccc--cccceEEEEECCCCCE-
Q 019006 220 MTL-QG----HQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILE-GHQHN--FEKNLLKCGWSPDGSK- 290 (347)
Q Consensus 220 ~~~-~~----~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~s~~g~~- 290 (347)
.-. .. .....+.|+++|+++.|++....+.|..+|+.. +....+.... +.... ..+.+ +.--.+|+.
T Consensus 173 ~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~--pv~~~v~~~~~G~~~~~~~~dgi--lp~~~~G~vl 248 (334)
T 2p9w_A 173 TFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK--PYAWPEPVKINGDFGTLSGTEKI--VTVPVGNESV 248 (334)
T ss_dssp EEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSS--SSCCCEECEESSCCCCCTTEEEE--EEEEETTEEE
T ss_pred eeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC--CcceeecccccCCcccccCcccc--cccccCCEEE
Confidence 111 11 112367999999999998887799999999873 2110111110 21111 11122 233346777
Q ss_pred EEEeeCCCeEEEEeCCC
Q 019006 291 VTAGSSDRMVYIWDTTS 307 (347)
Q Consensus 291 l~sgs~dg~i~vwd~~~ 307 (347)
|++.+..+.+.+.+.+.
T Consensus 249 lV~~~~~~~~~l~S~Dg 265 (334)
T 2p9w_A 249 LVGARAPYAISFRSWDN 265 (334)
T ss_dssp EEEEETTEEEEEECSST
T ss_pred EEEcCCCCEEEEECCCC
Confidence 45555666666666544
No 303
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=97.49 E-value=0.0032 Score=53.80 Aligned_cols=195 Identities=15% Similarity=0.135 Sum_probs=104.1
Q ss_pred CEEEEecCCCeEEEEECCCCceeeeeecc--CcceeEeecC-CCCCCEEEEE-cCCCceEEEeCCCCCceeecCC-----
Q 019006 113 SQIISASPDKTLRAWDVETGKQIKKMAEH--NSFVNSCCPS-RRGPPLVVSG-SDDGTAKLWDMRQRGAIQTFPD----- 183 (347)
Q Consensus 113 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~--~~~v~~~~~~-~~~~~~~~s~-~~d~~i~iwd~~~~~~~~~~~~----- 183 (347)
..++.++.||.|.-.|..+|+...++... ...+..-... ..+...++.. +.||.+..+|..++.....+..
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence 46888999999999999999988887654 1122110011 1122233333 6899999999876643322211
Q ss_pred CCceEE---EEE-c----CCCCeEEEEecCCcEEEEeCCCCceEEEecCCC--Cce-----eEEEEC-----CCCCEEEE
Q 019006 184 KYQITA---VSF-S----DASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQ--DMI-----TGMSLS-----PDGSYLLT 243 (347)
Q Consensus 184 ~~~v~~---~~~-~----~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~--~~i-----~~v~~~-----~~~~~l~t 243 (347)
...+.. ..+ . ..+..+++|+.+|.+...|+++|+.+.++.... ..+ .+.... ..+..++.
T Consensus 91 ~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v~i 170 (339)
T 2be1_A 91 TSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMIVI 170 (339)
T ss_dssp TCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEEEE
T ss_pred ccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeEEE
Confidence 111110 000 0 145688999999999999999999988875321 100 011110 11345666
Q ss_pred EcCCCcEEEEeCCCCCCcCce-eEEEeccccccccceE-EEEECCCCCEEEEeeCCCeEEEEeCCCceeeE
Q 019006 244 NGMDCKLCIWDMRPYAPQNRC-VKILEGHQHNFEKNLL-KCGWSPDGSKVTAGSSDRMVYIWDTTSRRILY 312 (347)
Q Consensus 244 ~~~d~~i~~wd~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~~ 312 (347)
+..+..+.+.+ +... ..+. ........ ....+. .-..+.|+.+ +.++.||.|+-+|..++..+.
T Consensus 171 g~~~y~v~~~~-~sG~-~W~~~~s~~~~~~--~~~~~~~~~~~s~Dg~~-~~~~~dg~v~A~d~~~G~~~W 236 (339)
T 2be1_A 171 GKTIFELGIHS-YDGA-SYNVTYSTWQQNV--LDVPLALQNTFSKDGMC-IAPFRDKSLLASDLDFRIARW 236 (339)
T ss_dssp EEEEEECEECC-TTSC-CCCCEEEEEECCT--TTHHHHTTCSSCSSSCC-EEEETTTEEEEECSTTCCEEE
T ss_pred ecceEEEEEEC-CCCC-eEEEecccccccc--cccccccccccccCCcE-EEECCCCEEEEEECCCCcEEE
Confidence 66666665555 2211 1000 01111100 000000 0001235666 457889999999999888876
No 304
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.49 E-value=0.038 Score=47.07 Aligned_cols=227 Identities=11% Similarity=0.058 Sum_probs=117.1
Q ss_pred ccceeEEEEcCCCCEEEEecCCCeEEEEECCCCceeeeeec----cCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCC
Q 019006 100 KNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAE----HNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQR 175 (347)
Q Consensus 100 ~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~ 175 (347)
...+.+|.|.+++..++ ++.+|.|. ...+.++.-..... ....+..+.+.+ ...++. +.++.|.. ....+
T Consensus 35 ~~~~~~v~~~~~~~~~~-~G~~g~i~-~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~--~~~~~~-g~~g~i~~-S~DgG 108 (327)
T 2xbg_A 35 TATILDMSFIDRHHGWL-VGVNATLM-ETRDGGQTWEPRTLVLDHSDYRFNSVSFQG--NEGWIV-GEPPIMLH-TTDGG 108 (327)
T ss_dssp SSCEEEEEESSSSCEEE-EETTTEEE-EESSTTSSCEECCCCCSCCCCEEEEEEEET--TEEEEE-EETTEEEE-ESSTT
T ss_pred CCcEEEEEECCCCcEEE-EcCCCeEE-EeCCCCCCCeECCCCCCCCCccEEEEEecC--CeEEEE-ECCCeEEE-ECCCC
Confidence 34688888887777666 45677653 33333432222211 123455555543 234443 44554433 22223
Q ss_pred CceeecC----CCCceEEEEEcCCCCeEEEEecCCcEEEEeCCCCceEE-EecCCCCceeEEEECCCCCEEEEEcCCCcE
Q 019006 176 GAIQTFP----DKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSM-TLQGHQDMITGMSLSPDGSYLLTNGMDCKL 250 (347)
Q Consensus 176 ~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~-~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i 250 (347)
+.-.... ....+..+.+.+++..++ ++.+|.|+.- ...++.-. ....+...+..+.+.+++.+++.+...+..
T Consensus 109 ~tW~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~g~v~~S-~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~ 186 (327)
T 2xbg_A 109 QSWSQIPLDPKLPGSPRLIKALGNGSAEM-ITNVGAIYRT-KDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFY 186 (327)
T ss_dssp SSCEECCCCTTCSSCEEEEEEEETTEEEE-EETTCCEEEE-SSTTSSEEEEECSCCCCEEEEEECTTSCEEEEETTSSEE
T ss_pred CCceECccccCCCCCeEEEEEECCCCEEE-EeCCccEEEE-cCCCCCCEEeecCCCcceEEEEEcCCCcEEEEECCCcEE
Confidence 3322221 123466677665555444 4456655332 12232211 222344568899999998887776544444
Q ss_pred EEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCCceeeEEec----CCccCeeeEEE
Q 019006 251 CIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLP----GHTGSVNESVF 326 (347)
Q Consensus 251 ~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~~~~~----~h~~~v~~~~~ 326 (347)
+-+|-. .... ..+.. .....+..+.+.+++..++. +.+|.+++.+.+.++.-..+. .+...+..+++
T Consensus 187 ~S~d~g--G~tW---~~~~~---~~~~~~~~~~~~~~g~~~~~-~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~ 257 (327)
T 2xbg_A 187 STWEPG--QTAW---EPHNR---TTSRRLHNMGFTPDGRLWMI-VNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAY 257 (327)
T ss_dssp EEECTT--CSSC---EEEEC---CSSSCEEEEEECTTSCEEEE-ETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEE
T ss_pred EEeCCC--CCce---eECCC---CCCCccceeEECCCCCEEEE-eCCceEEEecCCCCCeeEeccCCcccCCcceEEEEe
Confidence 444421 0011 11111 11245777888999876654 457888877533343332222 12345888999
Q ss_pred cCCCCEEEEecCCCcEEe
Q 019006 327 HATEPVIGSCSSDKQIYL 344 (347)
Q Consensus 327 ~~~~~~l~s~s~D~~i~i 344 (347)
.+++.+++.+. ++.|+.
T Consensus 258 ~~~~~~~~~g~-~g~i~~ 274 (327)
T 2xbg_A 258 RTPNEVWLAGG-AGALLC 274 (327)
T ss_dssp SSSSCEEEEES-TTCEEE
T ss_pred cCCCEEEEEeC-CCeEEE
Confidence 98877776544 666643
No 305
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.24 E-value=0.066 Score=46.83 Aligned_cols=137 Identities=9% Similarity=0.101 Sum_probs=84.0
Q ss_pred CcEEEEeCCCCceEEE--ecC--CCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCC-CcC-----c--eeEEEecc--
Q 019006 206 NDVKVWDLRKGEVSMT--LQG--HQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYA-PQN-----R--CVKILEGH-- 271 (347)
Q Consensus 206 g~i~iwd~~~~~~~~~--~~~--~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~-~~~-----~--~~~~~~~~-- 271 (347)
+.||.-++.....-+. ... .-+.|..+..+|+|++||..+.. .|.+-.+.... ... . ..+.+.-.
T Consensus 41 n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~~-~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~ 119 (452)
T 3pbp_A 41 NIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFNDN-EIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEE 119 (452)
T ss_dssp TEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECSS-EEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGC
T ss_pred CEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecCC-eEEEEEecCccccCcccccccccceeEEEcCCc
Confidence 5677666653322222 221 12257889999999999998754 78888876211 010 0 11222211
Q ss_pred ccccccceEEEEECCC---CCEEEEeeCCCeEEEEeCCCce--ee--------EEecCCccCeeeEEEcCCCC--EEEEe
Q 019006 272 QHNFEKNLLKCGWSPD---GSKVTAGSSDRMVYIWDTTSRR--IL--------YKLPGHTGSVNESVFHATEP--VIGSC 336 (347)
Q Consensus 272 ~~~~~~~~~~~~~s~~---g~~l~sgs~dg~i~vwd~~~~~--~~--------~~~~~h~~~v~~~~~~~~~~--~l~s~ 336 (347)
.......|..+.|||- +..|++-..|+.|++||+.... +. +.+......|.+++|.+++= ++++.
T Consensus 120 ~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~ 199 (452)
T 3pbp_A 120 EVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNT 199 (452)
T ss_dssp C--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEECTTSSCEEEEEC
T ss_pred ccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEEcCCCcEEEEEec
Confidence 1112356999999995 5689999999999999987521 11 12223346789999999764 34445
Q ss_pred cCCCcEE
Q 019006 337 SSDKQIY 343 (347)
Q Consensus 337 s~D~~i~ 343 (347)
+..|.||
T Consensus 200 t~~GDIY 206 (452)
T 3pbp_A 200 TEGGDIF 206 (452)
T ss_dssp TTSCEEE
T ss_pred CCCCCEE
Confidence 5777776
No 306
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.20 E-value=0.041 Score=55.40 Aligned_cols=253 Identities=13% Similarity=0.141 Sum_probs=139.9
Q ss_pred CCcEEEEeccCCCeeeE-EEeCcccceeEEEEcCCCCEEEEecCCCeEEEEECCCCceeeeeeccCcceeEeecCCCCCC
Q 019006 78 DRDIFLWHVHGDCKNFM-VLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPP 156 (347)
Q Consensus 78 d~~v~~w~~~~~~~~~~-~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 156 (347)
...|.+-|+.......+ ...+ -+.-.+|..+.|+.- ...++.|+|+++...+..+..... |.-+.|....
T Consensus 47 ~~~vvIidl~~~~~~~rrpi~A-----dsAIMnP~~~iiALr-ag~~lQiFnl~~k~klks~~~~e~-VvfWkWis~~-- 117 (1630)
T 1xi4_A 47 QAQVVIIDMNDPSNPIRRPISA-----DSAIMNPASKVIALK-AGKTLQIFNIEMKSKMKAHTMTDD-VTFWKWISLN-- 117 (1630)
T ss_pred CceEEEEECCCCCCcccccccc-----hhhccCCCcceEEEe-cCCeEEEeehHHhhhhcccccCCC-ceEEEecCCC--
Confidence 33677778754322211 1111 123357766655544 378999999998877776655443 4445555443
Q ss_pred EEEEEcCCCceEEEeCCCC-CceeecC-----CCCceEEEEEcCCCCeEEEEe-------cCCcEEEEeCCCCceEEEec
Q 019006 157 LVVSGSDDGTAKLWDMRQR-GAIQTFP-----DKYQITAVSFSDASDKIYTGG-------IDNDVKVWDLRKGEVSMTLQ 223 (347)
Q Consensus 157 ~~~s~~~d~~i~iwd~~~~-~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~-------~dg~i~iwd~~~~~~~~~~~ 223 (347)
.++-. .+..|..|++... .+.+.+. ...+|.....+++.++++..| -.|.+.+|..+.+ ....+.
T Consensus 118 ~l~lV-T~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~-~sQ~ie 195 (1630)
T 1xi4_A 118 TVALV-TDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIE 195 (1630)
T ss_pred eeEEE-cCCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccc-cchhhh
Confidence 23322 2357999999642 3333222 135688888888888776433 3467888887543 334455
Q ss_pred CCCCceeEEEEC--CCCCEEEEEc----CCCcEEEEeCCCC-CCcC----ceeEEEeccccccccceEEEEECCCCCEEE
Q 019006 224 GHQDMITGMSLS--PDGSYLLTNG----MDCKLCIWDMRPY-APQN----RCVKILEGHQHNFEKNLLKCGWSPDGSKVT 292 (347)
Q Consensus 224 ~~~~~i~~v~~~--~~~~~l~t~~----~d~~i~~wd~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~ 292 (347)
||...-..+... +....+++-. ..+.+.+-++... .... +.+...-... ...+-...+..++....+.
T Consensus 196 gha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~-~~~Dfpv~~~vs~k~g~iy 274 (1630)
T 1xi4_A 196 GHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPE-AQNDFPVAMQISEKHDVVF 274 (1630)
T ss_pred HhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcc-cccCcceEEEeccccCEEE
Confidence 664433333221 1112232211 1268888888542 1111 1111111100 1123345677788888899
Q ss_pred EeeCCCeEEEEeCCCceeeEEecCCccCeeeEEEcCCCCEEEEecCCCcE
Q 019006 293 AGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQI 342 (347)
Q Consensus 293 sgs~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i 342 (347)
.-+.-|.|++||+.++.+++.-+-....|...+.+....-++.....|.|
T Consensus 275 ~itk~G~~~~~d~~t~~~i~~~ris~~~iF~~~~~~~~~g~~~vnr~G~v 324 (1630)
T 1xi4_A 275 LITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQV 324 (1630)
T ss_pred EEecCceEEEEecccchhhhhccccCCceEEeccCCCCCceEEEcCCceE
Confidence 99999999999999999887554444555544555444444444455544
No 307
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.17 E-value=0.097 Score=45.06 Aligned_cols=229 Identities=12% Similarity=0.086 Sum_probs=118.4
Q ss_pred ceeEEEEcCCCCEEEEecCCCeEEEEECCCCce--eeeee---ccCcceeEeecCCC---CCCEEEEEcCC-----CceE
Q 019006 102 AILDLHWTTDGSQIISASPDKTLRAWDVETGKQ--IKKMA---EHNSFVNSCCPSRR---GPPLVVSGSDD-----GTAK 168 (347)
Q Consensus 102 ~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~--~~~~~---~~~~~v~~~~~~~~---~~~~~~s~~~d-----~~i~ 168 (347)
.-..|+|.|+|+++++ ..+|.|++++ +++. +..+. ........++++++ +..+.++-... +.|.
T Consensus 32 ~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~ 108 (352)
T 2ism_A 32 VPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVV 108 (352)
T ss_dssp CEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEE
T ss_pred CceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEE
Confidence 4578999999985555 5669999998 3332 11111 11233455667665 44455544432 5677
Q ss_pred EEeCCCCC------ceeecCC----CCceEEEEEcCCCCeEEEEec-------------CCcEEEEeCCCC---------
Q 019006 169 LWDMRQRG------AIQTFPD----KYQITAVSFSDASDKIYTGGI-------------DNDVKVWDLRKG--------- 216 (347)
Q Consensus 169 iwd~~~~~------~~~~~~~----~~~v~~~~~~~~~~~l~~~~~-------------dg~i~iwd~~~~--------- 216 (347)
.++..... .+..++. ......++|.|++...++.+. .|.|.-++....
T Consensus 109 r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~~ 188 (352)
T 2ism_A 109 RLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPFLG 188 (352)
T ss_dssp EEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTTT
T ss_pred EEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCcccC
Confidence 77765331 1122331 123467999999865555332 245666665420
Q ss_pred ----ceEEEecCCCCceeEEEECC-CCCEEEEEcCCCc--------EEEEeCCC-CC-C----------cCceeEEEecc
Q 019006 217 ----EVSMTLQGHQDMITGMSLSP-DGSYLLTNGMDCK--------LCIWDMRP-YA-P----------QNRCVKILEGH 271 (347)
Q Consensus 217 ----~~~~~~~~~~~~i~~v~~~~-~~~~l~t~~~d~~--------i~~wd~~~-~~-~----------~~~~~~~~~~~ 271 (347)
.....-.++. ....++|+| +++.+++-...+. |.+..-.. +. + .......+..
T Consensus 189 ~~~~~~~i~a~G~r-np~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~- 266 (352)
T 2ism_A 189 RRGARPEVYSLGHR-NPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLYFWPQ- 266 (352)
T ss_dssp CTTSCTTEEEECCS-EECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTT-
T ss_pred CCCCCccEEEEcCC-CcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCeEecCC-
Confidence 1111112332 357789999 5665554332222 33332110 00 0 0001111110
Q ss_pred ccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCCcee------eEEecCCccCeeeEEEcCCCCEEEEec-CCC
Q 019006 272 QHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRI------LYKLPGHTGSVNESVFHATEPVIGSCS-SDK 340 (347)
Q Consensus 272 ~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~------~~~~~~h~~~v~~~~~~~~~~~l~s~s-~D~ 340 (347)
......++| .+|.++++.-..+.|...++..... ...+-.-...+.++++.|++.+.++.. .+|
T Consensus 267 ----~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~~~~~~g 337 (352)
T 2ism_A 267 ----GFPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPDGALYVTTSNRDG 337 (352)
T ss_dssp ----CCCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTTSCEEEEECSTTT
T ss_pred ----CCCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCCCcEEEEEeCCCC
Confidence 113445566 4677777766777888887764321 112212235689999999998777654 344
No 308
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.12 E-value=0.022 Score=49.01 Aligned_cols=138 Identities=11% Similarity=0.037 Sum_probs=80.5
Q ss_pred cCCcEEEEeCCCC--ce-EEEecC-----CCCceeEEEECC--CCC-EEEEE-cC--CCcEEEEeCCCCCCcCceeEEEe
Q 019006 204 IDNDVKVWDLRKG--EV-SMTLQG-----HQDMITGMSLSP--DGS-YLLTN-GM--DCKLCIWDMRPYAPQNRCVKILE 269 (347)
Q Consensus 204 ~dg~i~iwd~~~~--~~-~~~~~~-----~~~~i~~v~~~~--~~~-~l~t~-~~--d~~i~~wd~~~~~~~~~~~~~~~ 269 (347)
.+|.|.++|+.+. +. ...+.+ ..-....+.+.+ ++. +|+.+ .. +.++.+|++.........+..+.
T Consensus 81 ~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~ 160 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIR 160 (355)
T ss_dssp -CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEEC
T ss_pred CCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccc
Confidence 6899999998732 21 222322 122466777755 343 34443 33 46788888765433333333343
Q ss_pred ccccccccceEEEEECCCCCEEEEee-----------------CCCeEEEEeCCCceeeEEecCCccCeeeEEEcCCCCE
Q 019006 270 GHQHNFEKNLLKCGWSPDGSKVTAGS-----------------SDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPV 332 (347)
Q Consensus 270 ~~~~~~~~~~~~~~~s~~g~~l~sgs-----------------~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 332 (347)
+. .-.....+.+.++|.+.++.. ..|.|+.+|.. +. ..+...-...+.++|+|+++.
T Consensus 161 g~---~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~--~~-~~~~~~l~~pNGia~spDg~~ 234 (355)
T 3sre_A 161 HK---LLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN--DV-RVVAEGFDFANGINISPDGKY 234 (355)
T ss_dssp CT---TCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT--CC-EEEEEEESSEEEEEECTTSSE
T ss_pred cC---CCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECC--eE-EEeecCCcccCcceECCCCCE
Confidence 32 224577888899999887764 23567777764 22 222222345799999999975
Q ss_pred EEE-ecCCCcEEeecC
Q 019006 333 IGS-CSSDKQIYLGEI 347 (347)
Q Consensus 333 l~s-~s~D~~i~i~~~ 347 (347)
|.- -+..+.|+.+++
T Consensus 235 lYvadt~~~~I~~~~~ 250 (355)
T 3sre_A 235 VYIAELLAHKIHVYEK 250 (355)
T ss_dssp EEEEEGGGTEEEEEEE
T ss_pred EEEEeCCCCeEEEEEE
Confidence 554 445677877653
No 309
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.10 E-value=0.035 Score=48.52 Aligned_cols=135 Identities=11% Similarity=0.173 Sum_probs=84.9
Q ss_pred CceEEEeCCCCCceeec--CC--CC-ceEEEEEcCCCCeEEEEecCCcEEEEeCCCCc------------eEEEecC---
Q 019006 165 GTAKLWDMRQRGAIQTF--PD--KY-QITAVSFSDASDKIYTGGIDNDVKVWDLRKGE------------VSMTLQG--- 224 (347)
Q Consensus 165 ~~i~iwd~~~~~~~~~~--~~--~~-~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~------------~~~~~~~--- 224 (347)
+.||.-++......+.+ +. .+ .+..+..+|+|.+|+..+.. .|.|..+..+. ....+.-
T Consensus 41 n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~~-~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~ 119 (452)
T 3pbp_A 41 NIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFNDN-EIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEE 119 (452)
T ss_dssp TEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECSS-EEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGC
T ss_pred CEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecCC-eEEEEEecCccccCcccccccccceeEEEcCCc
Confidence 55666565533323222 21 23 67789999999999887654 68888776221 1112221
Q ss_pred ---CCCceeEEEECCC---CCEEEEEcCCCcEEEEeCCCCCCcCceeEEEecccccc-----ccceEEEEECCCCCEEEE
Q 019006 225 ---HQDMITGMSLSPD---GSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNF-----EKNLLKCGWSPDGSKVTA 293 (347)
Q Consensus 225 ---~~~~i~~v~~~~~---~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~s~~g~~l~s 293 (347)
....|..+.|||- +..|++-..|+.|++||+..... .+. .++.....+ ...+.+++|.+++-.|..
T Consensus 120 ~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~--~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYv 196 (452)
T 3pbp_A 120 EVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQE--KPI-VLNKPNNSFGLDARVNDITDLEFSKDGLTLYC 196 (452)
T ss_dssp C--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTS--CCE-EESCCCSEEESCSSCCCEEEEEECTTSSCEEE
T ss_pred ccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCC--CCc-chhccccccCCCcccceEEEEEEcCCCcEEEE
Confidence 2467999999995 46788889999999999985221 111 222111111 256889999998877776
Q ss_pred ee--CCCeEEEE
Q 019006 294 GS--SDRMVYIW 303 (347)
Q Consensus 294 gs--~dg~i~vw 303 (347)
.+ .+|.|+-.
T Consensus 197 l~~t~~GDIYAl 208 (452)
T 3pbp_A 197 LNTTEGGDIFAF 208 (452)
T ss_dssp EECTTSCEEEEE
T ss_pred EecCCCCCEEEE
Confidence 44 88888754
No 310
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.09 E-value=0.044 Score=43.35 Aligned_cols=145 Identities=10% Similarity=0.068 Sum_probs=83.6
Q ss_pred ceEEEEEcCCCCeEEEEecCCcEEEEeCCCCce------EEEec--CCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCC
Q 019006 186 QITAVSFSDASDKIYTGGIDNDVKVWDLRKGEV------SMTLQ--GHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRP 257 (347)
Q Consensus 186 ~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~------~~~~~--~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~ 257 (347)
.+..++|+|++...++ .+|.++-.+..+... ...+- +-. .-..+.|.|+|.+.++ .||.|.-++-.+
T Consensus 42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~-~F~a~~fD~~G~LYav--~dG~iyr~~pP~ 116 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWN-QFQFLFFDPNGYLYAV--SKDKLYKASPPQ 116 (236)
T ss_dssp TCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGG-GCSEEEECTTSCEEEE--ETTEEEEESCCC
T ss_pred cceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccc-cceEEEECCCCCEEEe--CCCEEEEeCCCc
Confidence 5679999997765444 778888777654221 11110 111 1377899999998777 568888776422
Q ss_pred CCCcCcee---EEEeccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCCce------eeEEec-CCccCeeeEEEc
Q 019006 258 YAPQNRCV---KILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRR------ILYKLP-GHTGSVNESVFH 327 (347)
Q Consensus 258 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~------~~~~~~-~h~~~v~~~~~~ 327 (347)
.. ....+ ..+-. .. -..+..+.+.|+|.+-+.. |+.++-.....+. ....+- +.-..-..+.|.
T Consensus 117 ~~-~~~Wl~~a~~vg~--~g-w~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~ 190 (236)
T 1tl2_A 117 SD-TDNWIARATEVGS--GG-WSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFS 190 (236)
T ss_dssp ST-TCCHHHHSEEEEC--SS-GGGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEEC
T ss_pred CC-CCceeccccEecc--CC-CCceEEEEECCCceEEEEe--CCcEEecCCCCCCCcccccccceeccCCcceEEEEEEC
Confidence 11 11110 00100 01 1356888999999988777 7776655433211 011111 222234557799
Q ss_pred CCCCEEEEecCCCcEE
Q 019006 328 ATEPVIGSCSSDKQIY 343 (347)
Q Consensus 328 ~~~~~l~s~s~D~~i~ 343 (347)
+++.+.+.. ++.++
T Consensus 191 ~~G~l~~v~--~g~~Y 204 (236)
T 1tl2_A 191 SVGTLFGVQ--GGKFY 204 (236)
T ss_dssp TTSCEEEEE--TTEEE
T ss_pred CCCcEEEEe--CCeEE
Confidence 999887766 77665
No 311
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.07 E-value=0.3 Score=49.03 Aligned_cols=212 Identities=10% Similarity=0.079 Sum_probs=113.6
Q ss_pred eEEEEECCCCceeeeeeccC-cceeEe---ecCCCCCCEEEEEc----------CCCceEEEeCCCCCce--eecCCCCc
Q 019006 123 TLRAWDVETGKQIKKMAEHN-SFVNSC---CPSRRGPPLVVSGS----------DDGTAKLWDMRQRGAI--QTFPDKYQ 186 (347)
Q Consensus 123 ~i~iwd~~~~~~~~~~~~~~-~~v~~~---~~~~~~~~~~~s~~----------~d~~i~iwd~~~~~~~--~~~~~~~~ 186 (347)
.+++.|..+.+.+..+.-.. ..+.++ .+......+++.|+ ..|.|.+|++..++.. ...+.+..
T Consensus 808 ~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~g~ 887 (1158)
T 3ei3_A 808 NLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGA 887 (1158)
T ss_dssp EEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEESSC
T ss_pred EEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEcCCc
Confidence 36667766665554443222 222222 23333345777775 3578999988643322 22233566
Q ss_pred eEEEEEcCCCCeEEEEecCCcEEEEeCCCCceEE-EecCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCcee
Q 019006 187 ITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSM-TLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCV 265 (347)
Q Consensus 187 v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~-~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~ 265 (347)
+++++--. | ++++| ...+|++|++...+... ....+. .|..+.....+++++.|..-..+.+...+.. ..+ +
T Consensus 888 v~al~~~~-g-~Lla~-ig~~l~vy~l~~~~~L~~~~~~~~-~i~~~~l~~~~~~I~vgD~~~Sv~~~~y~~~--~~~-L 960 (1158)
T 3ei3_A 888 VYSMVEFN-G-KLLAS-INSTVRLYEWTTEKELRTECNHYN-NIMALYLKTKGDFILVGDLMRSVLLLAYKPM--EGN-F 960 (1158)
T ss_dssp EEEEEEET-T-EEEEE-ETTEEEEEEECTTSCEEEEEEECC-CSCEEEEEEETTEEEEEESSBCEEEEEEETT--TTE-E
T ss_pred CEEEeeeC-C-EEEEE-cCCEEEEEECCCCceEEEEeeccc-cEEEEEEeccCCEEEEEEhhheEEEEEEEcC--CCe-E
Confidence 77776432 3 44443 34689999997654322 221121 1333333335788888887777777654432 122 2
Q ss_pred EEEeccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCC--------ceeeEEecCCc-cCeeeEE---EcCC----
Q 019006 266 KILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTS--------RRILYKLPGHT-GSVNESV---FHAT---- 329 (347)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~--------~~~~~~~~~h~-~~v~~~~---~~~~---- 329 (347)
..+.... ....+.++.+-.+ ..++.+..+|.|.++.... .++...-.-|- ..|+.+. +.+.
T Consensus 961 ~~~a~D~--~~~~vta~~~ld~-~t~l~aD~~gNl~vl~~~~~~~~~~~~~~L~~~~~fhlG~~vt~~~~~sl~~~~~~~ 1037 (1158)
T 3ei3_A 961 EEIARDF--NPNWMSAVEILDD-DNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGE 1037 (1158)
T ss_dssp EEEEECC--SCBCEEEEEEEET-TEEEEEETTSEEEEEEECTTCCSTTGGGBEEEEEEEECSSCEEEEEECCSCCC----
T ss_pred EEEEeec--ccccEEEEEEEcc-CcEEEEcCCCcEEEEecCCCCCCccccceeeeEEEEeCCCcEeeEEeeeeecCCCcc
Confidence 2222211 2345667766544 4778899999999986543 12222222232 3455554 2332
Q ss_pred -----CCEEEEecCCCcEEe
Q 019006 330 -----EPVIGSCSSDKQIYL 344 (347)
Q Consensus 330 -----~~~l~s~s~D~~i~i 344 (347)
.+.+..++.+|.|.+
T Consensus 1038 ~~~~~~~~il~~T~~GsIg~ 1057 (1158)
T 3ei3_A 1038 TSTPTQGSVLFGTVNGMIGL 1057 (1158)
T ss_dssp ---CEEEEEEEEETTSCEEE
T ss_pred ccccccceEEEEecCCEEEE
Confidence 245778888888765
No 312
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.04 E-value=0.32 Score=48.84 Aligned_cols=183 Identities=10% Similarity=0.045 Sum_probs=86.2
Q ss_pred cccEEEEEECCC------CCeEEEeeC-CCcEEEEeccCCCeeeE--EEeCcccceeEEEEc--CCCCEEEEecCCCeEE
Q 019006 57 QSAVYTMKFNPA------GTVIASGSH-DRDIFLWHVHGDCKNFM--VLKGHKNAILDLHWT--TDGSQIISASPDKTLR 125 (347)
Q Consensus 57 ~~~V~~v~~~~~------~~~l~s~~~-d~~v~~w~~~~~~~~~~--~~~~h~~~v~~~~~~--~~~~~l~s~~~dg~i~ 125 (347)
...|.|+++.|. ++++|.|.. |++++++++.. ..... .+.. .....++.+. ....+|..|-.||.+.
T Consensus 553 ~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~-l~~~~~~~L~~-~~~p~si~l~~~~~~~~L~igl~dG~l~ 630 (1158)
T 3ei3_A 553 EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPS-FELLHKEMLGG-EIIPRSILMTTFESSHYLLCALGDGALF 630 (1158)
T ss_dssp SSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTT-CCEEEEEECCS-SCCEEEEEEEEETTEEEEEEEETTSEEE
T ss_pred CCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCC-CCeEEEEECCC-CCCCcEEEEEEeCCCcEEEEEeCCCeEE
Confidence 357899998763 368999996 99999999963 22221 1211 1122333322 2335788888999886
Q ss_pred EEECC--CCceeee--eeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeecCCCCceEEEEEcCC--CCeE
Q 019006 126 AWDVE--TGKQIKK--MAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDA--SDKI 199 (347)
Q Consensus 126 iwd~~--~~~~~~~--~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~--~~~l 199 (347)
.+.++ ++..... .......+.-..+...+..-+++.+ +.-..++--..+-....+....--....|+.. .+-+
T Consensus 631 ~~~~d~~tg~l~d~r~~~LG~~pv~L~~~~~~~~~~V~a~s-~rp~liy~~~~~l~~s~l~~~~v~~~~~F~se~~~~g~ 709 (1158)
T 3ei3_A 631 YFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACS-DRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSL 709 (1158)
T ss_dssp EEEECTTTCCEEEEEEEECCSSCCEEEEEESSSCEEEEEES-SSCEEEEESSSSEEEEEBSSSCCCEEEEECCSSSTTEE
T ss_pred EEEEcCCCCccccceeEEcCCCceEEEEEeeCCceeEEEEC-CCCEEEEEcCCceEEeccChHHhceEeccCcccCCCcE
Confidence 66553 3433211 1111222222211112222222222 33333333222111111121111123334432 2334
Q ss_pred EEEecCCcEEEEeCCCCc--eEEEecCCCCceeEEEECCCCCEEEEE
Q 019006 200 YTGGIDNDVKVWDLRKGE--VSMTLQGHQDMITGMSLSPDGSYLLTN 244 (347)
Q Consensus 200 ~~~~~dg~i~iwd~~~~~--~~~~~~~~~~~i~~v~~~~~~~~l~t~ 244 (347)
+.. .++.++|..+.... ...++.- ...+..++++|+.+.++.+
T Consensus 710 v~~-~~~~LrI~~i~~~~~~~~~~ipL-~~Tprri~y~~~~~~~~v~ 754 (1158)
T 3ei3_A 710 ALA-NNSTLTIGTIDEIQKLHIRTVPL-YESPRKICYQEVSQCFGVL 754 (1158)
T ss_dssp EEE-CSSCEEEEEECCSSSEEEEEEEC-SSEEEEEEEEGGGTEEEEE
T ss_pred EEE-cCCceEEEEecccCCeeEEEEeC-CCCceEEEEcCCCCEEEEE
Confidence 433 34568888764322 1222221 2456778888876655443
No 313
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=96.99 E-value=0.15 Score=43.99 Aligned_cols=228 Identities=13% Similarity=0.077 Sum_probs=114.7
Q ss_pred cccEEEEEECCCCCeEEEeeCCCcEEEEeccCCCeeeEEEe---CcccceeEEEEcCC---CCEEEEecC----C----C
Q 019006 57 QSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLK---GHKNAILDLHWTTD---GSQIISASP----D----K 122 (347)
Q Consensus 57 ~~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~---~h~~~v~~~~~~~~---~~~l~s~~~----d----g 122 (347)
-.....|+|.|+|++++ +..+|.|++++..+. ..+..+. ........|+++|+ +..|+.+.. + .
T Consensus 28 l~~P~~ia~~pdG~l~V-~e~~g~I~~~d~~G~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~ 105 (354)
T 3a9g_A 28 LEVPWSIAPLGGGRYLV-TERPGRLVLISPSGK-KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRN 105 (354)
T ss_dssp CSCEEEEEEEETTEEEE-EETTTEEEEECSSCE-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEE
T ss_pred CCCCeEEEEcCCCeEEE-EeCCCEEEEEeCCCc-eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcce
Confidence 45678999999998555 456699998875433 2222211 12345789999997 455554432 3 5
Q ss_pred eEEEEECCCC--ce-----e-eeeecc-CcceeEeecCCCCCCEEEEEcC-------------CCceEEEeCCCC-----
Q 019006 123 TLRAWDVETG--KQ-----I-KKMAEH-NSFVNSCCPSRRGPPLVVSGSD-------------DGTAKLWDMRQR----- 175 (347)
Q Consensus 123 ~i~iwd~~~~--~~-----~-~~~~~~-~~~v~~~~~~~~~~~~~~s~~~-------------d~~i~iwd~~~~----- 175 (347)
.|..|+.... .. + ..+... ......+.+.+++ .++++-+. .+.|.-++....
T Consensus 106 ~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG-~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~n 184 (354)
T 3a9g_A 106 RVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDG-MLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADN 184 (354)
T ss_dssp EEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTS-CEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTS
T ss_pred EEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCC-cEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCC
Confidence 6777776543 11 1 112111 1122345666655 45554322 134444443321
Q ss_pred ----CceeecCCCCceEEEEEcCCCCeEEEEecCC----cEEEEeCCC--------C--------ceEEEe-cCCCCcee
Q 019006 176 ----GAIQTFPDKYQITAVSFSDASDKIYTGGIDN----DVKVWDLRK--------G--------EVSMTL-QGHQDMIT 230 (347)
Q Consensus 176 ----~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg----~i~iwd~~~--------~--------~~~~~~-~~~~~~i~ 230 (347)
..+.... ......++|+|+...|+++.... .|.+...-. + .....+ ..| ....
T Consensus 185 pf~~~~i~a~G-~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~-~ap~ 262 (354)
T 3a9g_A 185 PFPNSPIWSYG-HRNPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSET-WAPS 262 (354)
T ss_dssp SSTTCCEEEEC-CSCCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCC-CCEE
T ss_pred CCCCCcEEEEc-cCCcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCCCC-cCCc
Confidence 0111111 11245788998444455443221 233322100 0 112223 222 3467
Q ss_pred EEEEC-------CCCCEEEEEcCCCcEEEEeCCCCCCcCcee--EEEeccccccccceEEEEECCCCCEEEEee
Q 019006 231 GMSLS-------PDGSYLLTNGMDCKLCIWDMRPYAPQNRCV--KILEGHQHNFEKNLLKCGWSPDGSKVTAGS 295 (347)
Q Consensus 231 ~v~~~-------~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs 295 (347)
.++|. .+|.++++.-..+.|...++... .... ..+.. .....+..+++.|||.+.++..
T Consensus 263 G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~---g~~~~~~~~~~---~~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 263 GASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDN---MEVRKISTFFK---NVFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp EEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGG---GCEEEEEEECT---TTSCCEEEEEECTTSCEEEEEC
T ss_pred ceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCC---Ccccceeeecc---CCCCCeeEEEECCCCcEEEEEe
Confidence 78883 46666666666678888877531 1111 11110 1124577888999997666654
No 314
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=96.99 E-value=0.23 Score=46.35 Aligned_cols=216 Identities=8% Similarity=-0.083 Sum_probs=129.2
Q ss_pred CCCeEEEEECCCCceeeeeec-cCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeecCCC-CceEEEEEcCCCC
Q 019006 120 PDKTLRAWDVETGKQIKKMAE-HNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDK-YQITAVSFSDASD 197 (347)
Q Consensus 120 ~dg~i~iwd~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~~~-~~v~~~~~~~~~~ 197 (347)
....|+..++.+......+.. .-.....+.+.+....++++-..++.|..+++........+... .....+++++.++
T Consensus 13 ~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~ 92 (628)
T 4a0p_A 13 RRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGK 92 (628)
T ss_dssp ETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTT
T ss_pred eCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCC
Confidence 456788888876443222211 11234456666666677777778889988888754433333322 3567888887766
Q ss_pred eEEEE-ecCCcEEEEeCCCCceEEEecCCCCceeEEEECCCCCEEEEEc--CCCcEEEEeCCCCCCcCceeEEEeccccc
Q 019006 198 KIYTG-GIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNG--MDCKLCIWDMRPYAPQNRCVKILEGHQHN 274 (347)
Q Consensus 198 ~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~--~d~~i~~wd~~~~~~~~~~~~~~~~~~~~ 274 (347)
.|+.+ ...+.|.+.++........+...-....+|++.|...+|+... ..+.|...++.... ...+-. .
T Consensus 93 ~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~-----~~~l~~---~ 164 (628)
T 4a0p_A 93 NLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSE-----RTTLVP---N 164 (628)
T ss_dssp EEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS-----CEEEEC---S
T ss_pred EEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCc-----eEEEEC---C
Confidence 66554 4567899999865443333323334568999998666665554 24677777765321 111111 1
Q ss_pred cccceEEEEECCCCCEEEEee-CCCeEEEEeCCCceeeEEecCCccCeeeEEEcCCCCEEEEecCCCcEEeec
Q 019006 275 FEKNLLKCGWSPDGSKVTAGS-SDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGE 346 (347)
Q Consensus 275 ~~~~~~~~~~s~~g~~l~sgs-~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~i~~ 346 (347)
-.....++++++++.|..+. ..+.|..+|+..... ..+...-.....+++.. +.+..|-...+.|...|
T Consensus 165 -~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~~l~~P~glav~~-~~ly~tD~~~~~I~~~d 234 (628)
T 4a0p_A 165 -VGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIADDLPHPFGLTQYQ-DYIYWTDWSRRSIERAN 234 (628)
T ss_dssp -CSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEECCSCEEEEEEET-TEEEEEETTTTEEEEEE
T ss_pred -CCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-EEeeccCCCceEEEEEC-CEEEEecCCCCEEEEEE
Confidence 13467888999877777664 567899999865433 22333333456777765 45555655566665543
No 315
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=96.91 E-value=0.17 Score=43.53 Aligned_cols=235 Identities=9% Similarity=0.032 Sum_probs=118.8
Q ss_pred ceeEEEEcCCCCEEEEecCCCeEEEEECCCCceeeeee-------ccCcceeEeecCCC---CCCEEEEEcC-------C
Q 019006 102 AILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMA-------EHNSFVNSCCPSRR---GPPLVVSGSD-------D 164 (347)
Q Consensus 102 ~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-------~~~~~v~~~~~~~~---~~~~~~s~~~-------d 164 (347)
....|+|.|+|+.|+.+...|.|++++.. ++....+. ........++++++ +..+.++-+. .
T Consensus 19 ~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~ 97 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAG 97 (353)
T ss_dssp SEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEE
T ss_pred CcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCce
Confidence 45789999999834444567999998853 32211111 11122345666664 3444444332 2
Q ss_pred CceEEEeCCCCC-------c-eeecCC----CCceEEEEEcCCCCeEEEEec-------------CCcEEEEeCCCC---
Q 019006 165 GTAKLWDMRQRG-------A-IQTFPD----KYQITAVSFSDASDKIYTGGI-------------DNDVKVWDLRKG--- 216 (347)
Q Consensus 165 ~~i~iwd~~~~~-------~-~~~~~~----~~~v~~~~~~~~~~~l~~~~~-------------dg~i~iwd~~~~--- 216 (347)
..|..+++.... . +..++. ......+.|.|++.+.++.+. .|+|.-+|....
T Consensus 98 ~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~ 177 (353)
T 2g8s_A 98 TAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPD 177 (353)
T ss_dssp EEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCCT
T ss_pred eEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCCC
Confidence 245555554221 1 112221 122467999999855444332 246766775422
Q ss_pred ----------ceEEEecCCCCceeEEEECC-CCCEEEEEc-CCCcEEEEeCCCCCCc-----------------------
Q 019006 217 ----------EVSMTLQGHQDMITGMSLSP-DGSYLLTNG-MDCKLCIWDMRPYAPQ----------------------- 261 (347)
Q Consensus 217 ----------~~~~~~~~~~~~i~~v~~~~-~~~~l~t~~-~d~~i~~wd~~~~~~~----------------------- 261 (347)
.....-.++. ....++|+| +++..++-. .++.=.|.-+.....-
T Consensus 178 ~npf~~~~~~~~~i~a~G~r-np~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~~~~~ 256 (353)
T 2g8s_A 178 DNPFIKESGVRAEIWSYGIR-NPQGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAKGEI 256 (353)
T ss_dssp TCTTTTSTTSCTTEEEECCS-EEEEEEEETTTTEEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTTCCBSS
T ss_pred CCCCcCCCCCCccEEEEcCc-CccceEEECCCCCEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccCcccCCC
Confidence 1111112333 367899999 555444322 1211122211111000
Q ss_pred ----CceeEEEeccccccccceEEEEECC-------CCCEEEEeeCCCeEEEEeCCCceeeEE--e-cCCccCeeeEEEc
Q 019006 262 ----NRCVKILEGHQHNFEKNLLKCGWSP-------DGSKVTAGSSDRMVYIWDTTSRRILYK--L-PGHTGSVNESVFH 327 (347)
Q Consensus 262 ----~~~~~~~~~~~~~~~~~~~~~~~s~-------~g~~l~sgs~dg~i~vwd~~~~~~~~~--~-~~h~~~v~~~~~~ 327 (347)
......+.. ......+.|.. +|.++++.-..+.|...++..++.... + ..-...+.++++.
T Consensus 257 ~~~~~~P~~~~~~-----~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~ 331 (353)
T 2g8s_A 257 VAGTEQPVFYWKD-----SPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTG 331 (353)
T ss_dssp CTTSCCCSEEESS-----CCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEEC
T ss_pred CCCccCCeEEeCC-----CcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEEC
Confidence 000000100 12345566643 577777777788888888876543322 2 2223478999999
Q ss_pred CCCCEEEEec-CCCcEE
Q 019006 328 ATEPVIGSCS-SDKQIY 343 (347)
Q Consensus 328 ~~~~~l~s~s-~D~~i~ 343 (347)
|++.+.++.. .+|.|+
T Consensus 332 pdG~lyv~td~~~g~I~ 348 (353)
T 2g8s_A 332 PDGYLYVLTDESSGELL 348 (353)
T ss_dssp TTSCEEEEECSTTEEEE
T ss_pred CCCcEEEEEeCCCCEEE
Confidence 9999777544 566554
No 316
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=96.83 E-value=0.18 Score=42.52 Aligned_cols=177 Identities=10% Similarity=0.154 Sum_probs=106.7
Q ss_pred CcEEEEeccCCCeeeEEEeCcc----cceeEEEEcCCCCEEEEec-------CCCeEEEEECCCCceeeeeeccCcceeE
Q 019006 79 RDIFLWHVHGDCKNFMVLKGHK----NAILDLHWTTDGSQIISAS-------PDKTLRAWDVETGKQIKKMAEHNSFVNS 147 (347)
Q Consensus 79 ~~v~~w~~~~~~~~~~~~~~h~----~~v~~~~~~~~~~~l~s~~-------~dg~i~iwd~~~~~~~~~~~~~~~~v~~ 147 (347)
..|+-|++.++..+...+..|. ..|..-.-+++.+.++..| -.|.+.+|..+.+. .+.+.+|...-..
T Consensus 126 taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~-sQ~ieGhaa~F~~ 204 (365)
T 2xzh_A 126 NAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGHAASFAQ 204 (365)
T ss_dssp SEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTE-EEEECCSEEEEEE
T ss_pred CcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecccc-cceeeeeeeeeEE
Confidence 4688999877666666776664 3577777788888766543 23778899877543 3344455433222
Q ss_pred eecCC--CCCCEEEEEcC---CCceEEEeCCCC---C-c-----ee-ecCC---CCceEEEEEcCCCCeEEEEecCCcEE
Q 019006 148 CCPSR--RGPPLVVSGSD---DGTAKLWDMRQR---G-A-----IQ-TFPD---KYQITAVSFSDASDKIYTGGIDNDVK 209 (347)
Q Consensus 148 ~~~~~--~~~~~~~s~~~---d~~i~iwd~~~~---~-~-----~~-~~~~---~~~v~~~~~~~~~~~l~~~~~dg~i~ 209 (347)
+.... ....+++.+.. .+++.+.++... . . +. .++. ..-..++..++..+.++.-+.-|.|+
T Consensus 205 ~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ih 284 (365)
T 2xzh_A 205 FKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIH 284 (365)
T ss_dssp ECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEE
T ss_pred EecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcEEE
Confidence 22111 11123443332 258888887432 1 1 11 1122 12245677777788899999999999
Q ss_pred EEeCCCCceEEEecCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCC
Q 019006 210 VWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMR 256 (347)
Q Consensus 210 iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~ 256 (347)
+||+.++.++..-+--.+.|..-+-+....-++.....|.|.--.+.
T Consensus 285 lyDleTgt~i~~nrIS~d~iF~ta~~~~~~Gi~~Vnr~GqVl~v~v~ 331 (365)
T 2xzh_A 285 LYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVE 331 (365)
T ss_dssp EEETTTCCEEEEEECCSSCEEEEEEEGGGTEEEEEETTCEEEEEEEC
T ss_pred EEEcccCcEEEEeccCCCceEEecccCCCCcEEEEcCCCEEEEEEEC
Confidence 99999999888765555666555544444445555566666554443
No 317
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=96.70 E-value=0.29 Score=43.03 Aligned_cols=177 Identities=10% Similarity=0.150 Sum_probs=109.9
Q ss_pred CcEEEEeccCCCeeeEEEeCcc----cceeEEEEcCCCCEEEEec-------CCCeEEEEECCCCceeeeeeccCcceeE
Q 019006 79 RDIFLWHVHGDCKNFMVLKGHK----NAILDLHWTTDGSQIISAS-------PDKTLRAWDVETGKQIKKMAEHNSFVNS 147 (347)
Q Consensus 79 ~~v~~w~~~~~~~~~~~~~~h~----~~v~~~~~~~~~~~l~s~~-------~dg~i~iwd~~~~~~~~~~~~~~~~v~~ 147 (347)
..|+-|++.++..+...+..|. ..|..-.-+++.+.++..| -.|.+.+|..+.+. .+.+.+|......
T Consensus 125 taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~-sQ~ieGhaa~F~~ 203 (494)
T 1bpo_A 125 NAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGHAASFAQ 203 (494)
T ss_dssp SEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCC-EEEECCSEEEEEE
T ss_pred CeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccc-cchheeeeeeeEE
Confidence 5689999977666666676664 3577777788888776543 24778999887543 2344445433222
Q ss_pred eecCC--CCCCEEEEEcCC---CceEEEeCCCC---C-ce-----e-ecCC---CCceEEEEEcCCCCeEEEEecCCcEE
Q 019006 148 CCPSR--RGPPLVVSGSDD---GTAKLWDMRQR---G-AI-----Q-TFPD---KYQITAVSFSDASDKIYTGGIDNDVK 209 (347)
Q Consensus 148 ~~~~~--~~~~~~~s~~~d---~~i~iwd~~~~---~-~~-----~-~~~~---~~~v~~~~~~~~~~~l~~~~~dg~i~ 209 (347)
+.... ....+++.+... +++.+.++... . .. . .++. ..-..++..++..+.++.-+.-|.|+
T Consensus 204 ~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~ 283 (494)
T 1bpo_A 204 FKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIH 283 (494)
T ss_dssp EECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEE
T ss_pred EecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEE
Confidence 22111 111244444432 78888888532 1 11 1 1122 12345677888888999999999999
Q ss_pred EEeCCCCceEEEecCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCC
Q 019006 210 VWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMR 256 (347)
Q Consensus 210 iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~ 256 (347)
+||+.++.++..-+-..+.|..-+-+....-++.....|.|.--.+.
T Consensus 284 lyDleTgt~i~~nrIs~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~ 330 (494)
T 1bpo_A 284 LYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVE 330 (494)
T ss_dssp EEETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEETTCEEEEEEEC
T ss_pred EEecccceeeeeecccCCceEEecccCCCCcEEEEccCceEEEEEEc
Confidence 99999999888766555666655555555556666677766555443
No 318
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=96.65 E-value=0.25 Score=42.24 Aligned_cols=146 Identities=12% Similarity=0.139 Sum_probs=82.6
Q ss_pred CceEEEEEcCCCCeEEEEecCCcEEEEeCCCCceE--EEec----CCCCceeEEEECCC---CCEEEEE---cCCCcEEE
Q 019006 185 YQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVS--MTLQ----GHQDMITGMSLSPD---GSYLLTN---GMDCKLCI 252 (347)
Q Consensus 185 ~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~--~~~~----~~~~~i~~v~~~~~---~~~l~t~---~~d~~i~~ 252 (347)
.....++|.|++..+++--..|.|++++...++.. ..+. ........|+++|+ +.+|... ..++.|.-
T Consensus 32 ~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R 111 (347)
T 3das_A 32 NSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVR 111 (347)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEE
T ss_pred CCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEE
Confidence 35688999999886665555899999986655432 1121 12345789999995 4445432 24456666
Q ss_pred EeCCCCC----C---cCceeEEEeccccccccceEEEEECCCCCEEEEeeC-------------CCeEEEEeCCCc----
Q 019006 253 WDMRPYA----P---QNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSS-------------DRMVYIWDTTSR---- 308 (347)
Q Consensus 253 wd~~~~~----~---~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~-------------dg~i~vwd~~~~---- 308 (347)
|.+.... . ....+..+.. .. ......+.|.|||.+.++-+. -|.|.-++....
T Consensus 112 ~~~~~~~~~~~~~~~~~~i~~~~p~-~~--~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~ 188 (347)
T 3das_A 112 MLYDEKKPSGEQLGAPDTVFRGIPK-GV--IHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPG 188 (347)
T ss_dssp EEBCTTSCTTCCBCCCEEEEEEECC-CS--SCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTT
T ss_pred EEeCCCCcccccCCCcEEEEEcCCC-CC--CccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCC
Confidence 6654311 0 0111111221 01 112346789999987776432 366666665532
Q ss_pred -----eeeEEecCCccCeeeEEEcCCCCEEEE
Q 019006 309 -----RILYKLPGHTGSVNESVFHATEPVIGS 335 (347)
Q Consensus 309 -----~~~~~~~~h~~~v~~~~~~~~~~~l~s 335 (347)
..++. .+|. ....++|+|++.+.++
T Consensus 189 nPf~~~~i~a-~G~R-Np~Gla~dp~G~L~~~ 218 (347)
T 3das_A 189 NPFPGSPVYS-YGHR-NVQGLAWDDKQRLFAS 218 (347)
T ss_dssp CSSTTCCEEE-BCCS-BCCEEEECTTCCEEEE
T ss_pred CCCCCCeEEe-eCCC-CcceEEECCCCCEEEE
Confidence 12222 2554 4678999998775543
No 319
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=96.62 E-value=0.29 Score=42.10 Aligned_cols=232 Identities=12% Similarity=0.024 Sum_probs=122.3
Q ss_pred ceeEEEEcCCCCEEEEecCCCeEEEEECCCCc-eeeeee---ccCcceeEeecCCC---CCCEEEEEcC---C----Cce
Q 019006 102 AILDLHWTTDGSQIISASPDKTLRAWDVETGK-QIKKMA---EHNSFVNSCCPSRR---GPPLVVSGSD---D----GTA 167 (347)
Q Consensus 102 ~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~-~~~~~~---~~~~~v~~~~~~~~---~~~~~~s~~~---d----~~i 167 (347)
....|+|.|+|+++++ ..+|.|++++ .+++ .+..+. ........+++.+. +..+.++-+. + ..|
T Consensus 30 ~P~~ia~~pdG~l~V~-e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v 107 (354)
T 3a9g_A 30 VPWSIAPLGGGRYLVT-ERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRV 107 (354)
T ss_dssp CEEEEEEEETTEEEEE-ETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEE
T ss_pred CCeEEEEcCCCeEEEE-eCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEE
Confidence 4578999999875554 5569999887 3443 121111 11223455667665 4445554432 2 456
Q ss_pred EEEeCCCC--C-----c-eeecCC--CCceEEEEEcCCCCeEEEEec-------------CCcEEEEeCCCC--------
Q 019006 168 KLWDMRQR--G-----A-IQTFPD--KYQITAVSFSDASDKIYTGGI-------------DNDVKVWDLRKG-------- 216 (347)
Q Consensus 168 ~iwd~~~~--~-----~-~~~~~~--~~~v~~~~~~~~~~~l~~~~~-------------dg~i~iwd~~~~-------- 216 (347)
..++.... . . +..++. ......+.|.|++...++.+. .|.|.-++....
T Consensus 108 ~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~ 187 (354)
T 3a9g_A 108 IRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPFP 187 (354)
T ss_dssp EEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSST
T ss_pred EEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCCC
Confidence 66766543 1 1 111221 123467899999976665332 245666665421
Q ss_pred ceEEEecCCCCceeEEEECC-CCCEEEEEcCCC---cEEEEeCCC-CC---------C--cCceeEEEeccccccccceE
Q 019006 217 EVSMTLQGHQDMITGMSLSP-DGSYLLTNGMDC---KLCIWDMRP-YA---------P--QNRCVKILEGHQHNFEKNLL 280 (347)
Q Consensus 217 ~~~~~~~~~~~~i~~v~~~~-~~~~l~t~~~d~---~i~~wd~~~-~~---------~--~~~~~~~~~~~~~~~~~~~~ 280 (347)
.....-.++.. ...++|+| +++.+++-...+ .|.+..-.. +. . .......+. + ......
T Consensus 188 ~~~i~a~G~rn-p~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~-~---~~~ap~ 262 (354)
T 3a9g_A 188 NSPIWSYGHRN-PQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTG-S---ETWAPS 262 (354)
T ss_dssp TCCEEEECCSC-CCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECT-T---CCCCEE
T ss_pred CCcEEEEccCC-cceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecC-C---CCcCCc
Confidence 11111223433 57899999 566555433222 244332110 00 0 000111110 0 012456
Q ss_pred EEEEC-------CCCCEEEEeeCCCeEEEEeCCCc-eee--EEe-cCCccCeeeEEEcCCCCEEEEec-CCC
Q 019006 281 KCGWS-------PDGSKVTAGSSDRMVYIWDTTSR-RIL--YKL-PGHTGSVNESVFHATEPVIGSCS-SDK 340 (347)
Q Consensus 281 ~~~~s-------~~g~~l~sgs~dg~i~vwd~~~~-~~~--~~~-~~h~~~v~~~~~~~~~~~l~s~s-~D~ 340 (347)
.++|. .+|.++++.-..+.|...++... +.. ..+ .+-...+.++++.|++.+.++.. .+|
T Consensus 263 G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~~~~~G 334 (354)
T 3a9g_A 263 GASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILISTSNRDG 334 (354)
T ss_dssp EEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEECTTSS
T ss_pred ceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEEEeCCCC
Confidence 66773 57777777777788999988753 222 233 23345789999999998877764 344
No 320
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=96.59 E-value=0.25 Score=41.09 Aligned_cols=172 Identities=12% Similarity=0.086 Sum_probs=83.9
Q ss_pred CCEEEEEcCC-----CceEEEeCCCCC---cee--ecCCC-CceEEEEEcCCCCeEEEEecC-----CcEEEEeCCCCce
Q 019006 155 PPLVVSGSDD-----GTAKLWDMRQRG---AIQ--TFPDK-YQITAVSFSDASDKIYTGGID-----NDVKVWDLRKGEV 218 (347)
Q Consensus 155 ~~~~~s~~~d-----~~i~iwd~~~~~---~~~--~~~~~-~~v~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~ 218 (347)
..+++.|+.+ ..+.+||+.+.. -.. .++.. .....+.+ ++..++.|+.+ ..+.+||+.+.+-
T Consensus 63 ~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W 140 (301)
T 2vpj_A 63 DRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQW 140 (301)
T ss_dssp TEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTEE
T ss_pred CEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCCeE
Confidence 3566667654 458889987765 222 22221 12222223 45566666643 3588999877642
Q ss_pred EE--EecCCCCceeEEEECCCCCEEEEEcCC-----CcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEE
Q 019006 219 SM--TLQGHQDMITGMSLSPDGSYLLTNGMD-----CKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKV 291 (347)
Q Consensus 219 ~~--~~~~~~~~i~~v~~~~~~~~l~t~~~d-----~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l 291 (347)
.. .+..... -.+++. .+++.++.||.+ ..+.+||.... .. ..+....... .....+. -++.++
T Consensus 141 ~~~~~~p~~r~-~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~d~~~~----~W-~~~~~~p~~r-~~~~~~~--~~~~i~ 210 (301)
T 2vpj_A 141 SMLGDMQTARE-GAGLVV-ASGVIYCLGGYDGLNILNSVEKYDPHTG----HW-TNVTPMATKR-SGAGVAL--LNDHIY 210 (301)
T ss_dssp EEEEECSSCCB-SCEEEE-ETTEEEEECCBCSSCBCCCEEEEETTTT----EE-EEECCCSSCC-BSCEEEE--ETTEEE
T ss_pred EECCCCCCCcc-cceEEE-ECCEEEEECCCCCCcccceEEEEeCCCC----cE-EeCCCCCccc-ccceEEE--ECCEEE
Confidence 22 2211111 112222 256666676654 35778887532 11 1111111100 1111122 256777
Q ss_pred EEeeCC-----CeEEEEeCCCceeeE--EecCCccCeeeEEEcCCCCEEEEecCCC
Q 019006 292 TAGSSD-----RMVYIWDTTSRRILY--KLPGHTGSVNESVFHATEPVIGSCSSDK 340 (347)
Q Consensus 292 ~sgs~d-----g~i~vwd~~~~~~~~--~~~~h~~~v~~~~~~~~~~~l~s~s~D~ 340 (347)
+.|+.+ ..+.+||..+.+-.. .++... ....+..-++++++.++.++
T Consensus 211 v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r--~~~~~~~~~~~i~v~GG~~~ 264 (301)
T 2vpj_A 211 VVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPR--CYVGATVLRGRLYAIAGYDG 264 (301)
T ss_dssp EECCBCSSSBCCCEEEEETTTTEEEEECCCSSCC--BSCEEEEETTEEEEECCBCS
T ss_pred EEeCCCCCcccceEEEEeCCCCcEEECCCCCCcc--cceeEEEECCEEEEEcCcCC
Confidence 777754 468999998765332 122111 11122223667888887663
No 321
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.38 E-value=0.38 Score=42.96 Aligned_cols=110 Identities=14% Similarity=0.180 Sum_probs=58.7
Q ss_pred ceEEEEEcCCCCeEEEEecCCcEEEEeCCCCceE--EEecC------CCCceeEEEECCC---CCEEEEEcC--------
Q 019006 186 QITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVS--MTLQG------HQDMITGMSLSPD---GSYLLTNGM-------- 246 (347)
Q Consensus 186 ~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~--~~~~~------~~~~i~~v~~~~~---~~~l~t~~~-------- 246 (347)
....++|.|++..+++-...+.|++++...++.. ..+.. ...-+..|+|+|+ +.+|..+..
T Consensus 28 ~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~ 107 (454)
T 1cru_A 28 KPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTD 107 (454)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--
T ss_pred CceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCCc
Confidence 4678999999886665444347888876555432 22221 1344679999995 555544432
Q ss_pred -----CCcEEEEeCCCCCCcC-ceeEEEeccccccccceEEEEECCCCCEEEEee
Q 019006 247 -----DCKLCIWDMRPYAPQN-RCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGS 295 (347)
Q Consensus 247 -----d~~i~~wd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs 295 (347)
...|..++........ .....+.............++|.|||.+.++-+
T Consensus 108 ~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 108 KELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred cccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 2345555543211110 111111111101112367889999998777643
No 322
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=96.28 E-value=0.4 Score=39.93 Aligned_cols=173 Identities=13% Similarity=0.139 Sum_probs=81.5
Q ss_pred CCEEEEEcCC-----CceEEEeCCCCCceee--cCCC-CceEEEEEcCCCCeEEEEecCC-----cEEEEeCCCCceEEE
Q 019006 155 PPLVVSGSDD-----GTAKLWDMRQRGAIQT--FPDK-YQITAVSFSDASDKIYTGGIDN-----DVKVWDLRKGEVSMT 221 (347)
Q Consensus 155 ~~~~~s~~~d-----~~i~iwd~~~~~~~~~--~~~~-~~v~~~~~~~~~~~l~~~~~dg-----~i~iwd~~~~~~~~~ 221 (347)
..+++.|+.+ ..+.+||..+..-... ++.. .....+.+ ++..++.|+.++ .+.+||+.+.+-...
T Consensus 62 ~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~ 139 (302)
T 2xn4_A 62 GLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHV 139 (302)
T ss_dssp TEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEECSSCEEEEEEEEETTTTEEEEE
T ss_pred CEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEE--CCEEEEEcCCCCCccCceEEEEeCCCCeEeec
Confidence 3466666644 3577888876543221 2221 12222222 455666676553 477889876642221
Q ss_pred --ecCCCCceeEEEECCCCCEEEEEcCC-------CcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEEE
Q 019006 222 --LQGHQDMITGMSLSPDGSYLLTNGMD-------CKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVT 292 (347)
Q Consensus 222 --~~~~~~~i~~v~~~~~~~~l~t~~~d-------~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~ 292 (347)
+..... -.+++. .+++.++.||.+ ..+.+||+... ... .+....... .....+. -++.+++
T Consensus 140 ~~~p~~r~-~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~----~W~-~~~~~p~~r-~~~~~~~--~~~~iyv 209 (302)
T 2xn4_A 140 APMNTRRS-SVGVGV-VGGLLYAVGGYDVASRQCLSTVECYNATTN----EWT-YIAEMSTRR-SGAGVGV--LNNLLYA 209 (302)
T ss_dssp CCCSSCCB-SCEEEE-ETTEEEEECCEETTTTEECCCEEEEETTTT----EEE-EECCCSSCC-BSCEEEE--ETTEEEE
T ss_pred CCCCCccc-CceEEE-ECCEEEEEeCCCCCCCccccEEEEEeCCCC----cEE-ECCCCcccc-ccccEEE--ECCEEEE
Confidence 111111 112222 245666666542 34778887532 111 111111100 1111122 2567777
Q ss_pred EeeCC-----CeEEEEeCCCceeeEEecCCc-cCeeeEEEcCCCCEEEEecCCC
Q 019006 293 AGSSD-----RMVYIWDTTSRRILYKLPGHT-GSVNESVFHATEPVIGSCSSDK 340 (347)
Q Consensus 293 sgs~d-----g~i~vwd~~~~~~~~~~~~h~-~~v~~~~~~~~~~~l~s~s~D~ 340 (347)
.|+.+ ..+.+||..+.+-.. +.... ..-...+..-++++++.++.++
T Consensus 210 ~GG~~~~~~~~~~~~yd~~~~~W~~-~~~~~~~r~~~~~~~~~~~i~v~GG~~~ 262 (302)
T 2xn4_A 210 VGGHDGPLVRKSVEVYDPTTNAWRQ-VADMNMCRRNAGVCAVNGLLYVVGGDDG 262 (302)
T ss_dssp ECCBSSSSBCCCEEEEETTTTEEEE-ECCCSSCCBSCEEEEETTEEEEECCBCS
T ss_pred ECCCCCCcccceEEEEeCCCCCEee-CCCCCCccccCeEEEECCEEEEECCcCC
Confidence 77754 468999988765332 21111 1111112223667888888664
No 323
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=96.12 E-value=0.5 Score=39.61 Aligned_cols=177 Identities=14% Similarity=0.131 Sum_probs=81.5
Q ss_pred EEEeeCCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEecC----C-------CeEEEEECCCCceeeeeec
Q 019006 72 IASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASP----D-------KTLRAWDVETGKQIKKMAE 140 (347)
Q Consensus 72 l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~----d-------g~i~iwd~~~~~~~~~~~~ 140 (347)
++.|+ ..+..||...+.-....+..............++..++.|+. + ..+.+||..+.+-. .+..
T Consensus 8 ~~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~-~~~~ 84 (315)
T 4asc_A 8 FMISE--EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWL-GMPP 84 (315)
T ss_dssp EEEET--TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEE-ECCC
T ss_pred EEEcC--CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEE-ECCC
Confidence 44455 467888875432111222211112222223346777777773 1 12677888765432 1111
Q ss_pred cCc--ceeEeecCCCCCCEEEEEcCC--------CceEEEeCCCCCcee--ecCCC-CceEEEEEcCCCCeEEEEec-C-
Q 019006 141 HNS--FVNSCCPSRRGPPLVVSGSDD--------GTAKLWDMRQRGAIQ--TFPDK-YQITAVSFSDASDKIYTGGI-D- 205 (347)
Q Consensus 141 ~~~--~v~~~~~~~~~~~~~~s~~~d--------~~i~iwd~~~~~~~~--~~~~~-~~v~~~~~~~~~~~l~~~~~-d- 205 (347)
-.. .-..++.. +..+++.|+.+ ..+.+||..+..-.. .++.. .....+.+ ++..++.|+. +
T Consensus 85 ~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~ 160 (315)
T 4asc_A 85 LPSPRCLFGLGEA--LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSH--MDLVYVIGGKGSD 160 (315)
T ss_dssp BSSCEESCEEEEE--TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCTT
T ss_pred CCcchhceeEEEE--CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEE--CCEEEEEeCCCCC
Confidence 111 01111111 33566666632 457888887654222 22221 11222222 4456666765 2
Q ss_pred ----CcEEEEeCCCCceEE--EecCCCCceeEEEECCCCCEEEEEcCCC-----cEEEEeCCC
Q 019006 206 ----NDVKVWDLRKGEVSM--TLQGHQDMITGMSLSPDGSYLLTNGMDC-----KLCIWDMRP 257 (347)
Q Consensus 206 ----g~i~iwd~~~~~~~~--~~~~~~~~i~~v~~~~~~~~l~t~~~d~-----~i~~wd~~~ 257 (347)
..+.+||+.+.+-.. .+..... -.+++. -+++.++.||.++ .+.+||...
T Consensus 161 ~~~~~~~~~yd~~~~~W~~~~~~p~~r~-~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~ 221 (315)
T 4asc_A 161 RKCLNKMCVYDPKKFEWKELAPMQTARS-LFGATV-HDGRIIVAAGVTDTGLTSSAEVYSITD 221 (315)
T ss_dssp SCBCCCEEEEETTTTEEEECCCCSSCCB-SCEEEE-ETTEEEEEEEECSSSEEEEEEEEETTT
T ss_pred CcccceEEEEeCCCCeEEECCCCCCchh-ceEEEE-ECCEEEEEeccCCCCccceEEEEECCC
Confidence 468999987764221 1111111 112222 2566777777554 477788753
No 324
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=96.00 E-value=0.55 Score=38.98 Aligned_cols=184 Identities=14% Similarity=0.145 Sum_probs=89.0
Q ss_pred CCCEEEEecCC-----CeEEEEECCCCc---ee--eeeeccCcceeEeecCCCCCCEEEEEcCC-----CceEEEeCCCC
Q 019006 111 DGSQIISASPD-----KTLRAWDVETGK---QI--KKMAEHNSFVNSCCPSRRGPPLVVSGSDD-----GTAKLWDMRQR 175 (347)
Q Consensus 111 ~~~~l~s~~~d-----g~i~iwd~~~~~---~~--~~~~~~~~~v~~~~~~~~~~~~~~s~~~d-----~~i~iwd~~~~ 175 (347)
++..++.|+.+ ..+.+||..+.+ -. ..+...... ..++.. +..+++.|+.+ ..+.+||+.+.
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~-~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~ 138 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGL-AGATTL--GDMIYVSGGFDGSRRHTSMERYDPNID 138 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBS-CEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTT
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccc-eeEEEE--CCEEEEEcccCCCcccceEEEEcCCCC
Confidence 45666777754 358889987765 21 111111111 111111 23566666543 35778887765
Q ss_pred Cce--eecCCC-CceEEEEEcCCCCeEEEEecC-----CcEEEEeCCCCceEEE--ecCCCCceeEEEECCCCCEEEEEc
Q 019006 176 GAI--QTFPDK-YQITAVSFSDASDKIYTGGID-----NDVKVWDLRKGEVSMT--LQGHQDMITGMSLSPDGSYLLTNG 245 (347)
Q Consensus 176 ~~~--~~~~~~-~~v~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~--~~~~~~~i~~v~~~~~~~~l~t~~ 245 (347)
.-. ..++.. .....+.+ ++..++.|+.+ ..+.+||+.+.+-... +..... -.++.. .++..++.||
T Consensus 139 ~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~-~~~~~~-~~~~i~v~GG 214 (301)
T 2vpj_A 139 QWSMLGDMQTAREGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRS-GAGVAL-LNDHIYVVGG 214 (301)
T ss_dssp EEEEEEECSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCB-SCEEEE-ETTEEEEECC
T ss_pred eEEECCCCCCCcccceEEEE--CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccc-cceEEE-ECCEEEEEeC
Confidence 432 222221 11222222 45566666654 4588999877643221 111111 112222 2456666776
Q ss_pred CC-----CcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEEEEeeCC-----CeEEEEeCCCce
Q 019006 246 MD-----CKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSD-----RMVYIWDTTSRR 309 (347)
Q Consensus 246 ~d-----~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~d-----g~i~vwd~~~~~ 309 (347)
.+ ..+.+||+... .. ..+...... ......+. -++++++.|+.+ ..+.+||..+.+
T Consensus 215 ~~~~~~~~~v~~yd~~~~----~W-~~~~~~p~~-r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 280 (301)
T 2vpj_A 215 FDGTAHLSSVEAYNIRTD----SW-TTVTSMTTP-RCYVGATV--LRGRLYAIAGYDGNSLLSSIECYDPIIDS 280 (301)
T ss_dssp BCSSSBCCCEEEEETTTT----EE-EEECCCSSC-CBSCEEEE--ETTEEEEECCBCSSSBEEEEEEEETTTTE
T ss_pred CCCCcccceEEEEeCCCC----cE-EECCCCCCc-ccceeEEE--ECCEEEEEcCcCCCcccccEEEEcCCCCe
Confidence 54 46888887632 11 112111110 01111222 256777777755 457888887654
No 325
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=95.69 E-value=0.76 Score=38.24 Aligned_cols=185 Identities=11% Similarity=0.102 Sum_probs=89.1
Q ss_pred CCCEEEEecCC----CeEEEEECCCCceee--eeeccCcceeEeecCCCCCCEEEEEcCC------CceEEEeCCCCCce
Q 019006 111 DGSQIISASPD----KTLRAWDVETGKQIK--KMAEHNSFVNSCCPSRRGPPLVVSGSDD------GTAKLWDMRQRGAI 178 (347)
Q Consensus 111 ~~~~l~s~~~d----g~i~iwd~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~~~s~~~d------~~i~iwd~~~~~~~ 178 (347)
++..++.|+.+ ..+.+||..+.+-.. .+...... ..++.. +..+++.|+.+ ..+.+||..+..-.
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~ 131 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDS-LAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWH 131 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBS-CEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEE
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccc-eeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceE
Confidence 45666777654 568888988764322 11111111 111111 33566667654 45788888765432
Q ss_pred ee--cCCC-CceEEEEEcCCCCeEEEEec---------CCcEEEEeCCCCceEEEecCCCC-ceeEEEECCCCCEEEEEc
Q 019006 179 QT--FPDK-YQITAVSFSDASDKIYTGGI---------DNDVKVWDLRKGEVSMTLQGHQD-MITGMSLSPDGSYLLTNG 245 (347)
Q Consensus 179 ~~--~~~~-~~v~~~~~~~~~~~l~~~~~---------dg~i~iwd~~~~~~~~~~~~~~~-~i~~v~~~~~~~~l~t~~ 245 (347)
.. ++.. .....+.+ ++..++.|+. ...+.+||+.+.+-...-..... .-.++... +++.++.||
T Consensus 132 ~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG 208 (306)
T 3ii7_A 132 TKPSMLTQRCSHGMVEA--NGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFV-KDKIFAVGG 208 (306)
T ss_dssp EECCCSSCCBSCEEEEE--TTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEECC
T ss_pred eCCCCcCCcceeEEEEE--CCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEE-CCEEEEEeC
Confidence 22 2221 11222222 4455555653 34588999887642221111111 11122222 556666666
Q ss_pred CC-----CcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEEEEeeCC-----CeEEEEeCCCce
Q 019006 246 MD-----CKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSD-----RMVYIWDTTSRR 309 (347)
Q Consensus 246 ~d-----~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~d-----g~i~vwd~~~~~ 309 (347)
.+ ..+.+||+... .. ..+...... ......+.+ ++.+++.|+.+ ..+.+||..+.+
T Consensus 209 ~~~~~~~~~~~~yd~~~~----~W-~~~~~~p~~-r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~ 274 (306)
T 3ii7_A 209 QNGLGGLDNVEYYDIKLN----EW-KMVSPMPWK-GVTVKCAAV--GSIVYVLAGFQGVGRLGHILEYNTETDK 274 (306)
T ss_dssp EETTEEBCCEEEEETTTT----EE-EECCCCSCC-BSCCEEEEE--TTEEEEEECBCSSSBCCEEEEEETTTTE
T ss_pred CCCCCCCceEEEeeCCCC----cE-EECCCCCCC-ccceeEEEE--CCEEEEEeCcCCCeeeeeEEEEcCCCCe
Confidence 43 35778887632 11 111111100 011122222 66777788744 568899987754
No 326
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=95.65 E-value=0.68 Score=39.56 Aligned_cols=28 Identities=7% Similarity=0.078 Sum_probs=17.6
Q ss_pred CCCCEEEEeeCCC------eEEEEeCCCceeeEE
Q 019006 286 PDGSKVTAGSSDR------MVYIWDTTSRRILYK 313 (347)
Q Consensus 286 ~~g~~l~sgs~dg------~i~vwd~~~~~~~~~ 313 (347)
.++++++.|+.++ .|.++++++++.+..
T Consensus 315 ~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~ 348 (357)
T 2uvk_A 315 WNNSLLIIGGETAGGKAVTDSVLITVKDNKVTVQ 348 (357)
T ss_dssp ETTEEEEEEEECGGGCEEEEEEEEEC-CCSCEEE
T ss_pred eCCEEEEEeeeCCCCCEeeeEEEEEEcCcEeEee
Confidence 4677777887542 366668877776654
No 327
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=95.52 E-value=1 Score=38.51 Aligned_cols=79 Identities=10% Similarity=0.160 Sum_probs=48.8
Q ss_pred ecCccccEEEEEECCCCCeEEEeeCCCcEEEEeccCCCe-eeEEE----eCcccceeEEEEcCC---CCEEEEe---cCC
Q 019006 53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCK-NFMVL----KGHKNAILDLHWTTD---GSQIISA---SPD 121 (347)
Q Consensus 53 ~~~h~~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~-~~~~~----~~h~~~v~~~~~~~~---~~~l~s~---~~d 121 (347)
+...-...+.|+|.|+|.++++--..|.|++++..+... .+..+ .........|+++|+ +..|+.. ..+
T Consensus 27 va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~ 106 (347)
T 3das_A 27 VATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASD 106 (347)
T ss_dssp EECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSS
T ss_pred eecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCC
Confidence 334456788999999999887776689999887542222 12111 122456789999995 3444432 234
Q ss_pred CeEEEEECCC
Q 019006 122 KTLRAWDVET 131 (347)
Q Consensus 122 g~i~iwd~~~ 131 (347)
..|.-|....
T Consensus 107 ~~v~R~~~~~ 116 (347)
T 3das_A 107 NRIVRMLYDE 116 (347)
T ss_dssp EEEEEEEBCT
T ss_pred CEEEEEEeCC
Confidence 4565566554
No 328
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=95.12 E-value=1.2 Score=37.17 Aligned_cols=209 Identities=6% Similarity=0.032 Sum_probs=104.5
Q ss_pred CCCeEEEee--CCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEecCC--------------CeEEEEECCC
Q 019006 68 AGTVIASGS--HDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPD--------------KTLRAWDVET 131 (347)
Q Consensus 68 ~~~~l~s~~--~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d--------------g~i~iwd~~~ 131 (347)
++..+.-.. .++.|+..+.++.. ...+... . +-.+++++++|+-+... ..|+..+++.
T Consensus 24 ~g~~iy~~n~~d~~~ly~~~~dg~~--~~~l~~~--~--~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg 97 (302)
T 3s25_A 24 SDGEVFFSNTNDNGRLYAMNIDGSN--IHKLSND--T--AMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNG 97 (302)
T ss_dssp ETTEEEEEEGGGTTEEEEEETTSCS--CEEEEEE--E--EEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTS
T ss_pred eCCEEEEEeCCCCceEEEEcCCCCC--CEEccCC--c--eeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCC
Confidence 455444332 34556655554432 2222221 1 23457888888766542 3577777766
Q ss_pred CceeeeeeccCcceeEeecCCCCCCEEEEE---cCCCceEEEeCCCCCceeecCCCCceEEEEEcCCCCeEEEEec-CCc
Q 019006 132 GKQIKKMAEHNSFVNSCCPSRRGPPLVVSG---SDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIYTGGI-DND 207 (347)
Q Consensus 132 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~---~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~ 207 (347)
.+.. .+..... ..+ .+.+..+..+- .....|...++..........+.. ..++++++.|+-.+. ...
T Consensus 98 ~~~~-~l~~~~~--~~~--s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~~~----~~~~~~g~~iy~t~~g~~~ 168 (302)
T 3s25_A 98 HGST-VLDPDPC--IYA--SLIGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNHYL----FTCNTSDRYFYYNNPKNGQ 168 (302)
T ss_dssp CCCE-EEECSCE--EEE--EEETTEEEEEEESSSSCEEEEEEETTSCCCEEEESSCC----CCSEEETTEEEEECTTTCC
T ss_pred Ccce-EeecCCc--cEE--EEeCCEEEEEeecCCCCceEEEEECCCCCeEEEeCCCc----eEeeEECCEEEEEeCCCce
Confidence 5432 2222211 122 22333444443 233445555655433322222221 345677787775554 678
Q ss_pred EEEEeCCCCceEEEecCCCCceeEEEECCCCCEEEEEcCC--CcEEEEeCCCCCCcCceeEEEeccccccccceEEEEEC
Q 019006 208 VKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMD--CKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWS 285 (347)
Q Consensus 208 i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~~d--~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 285 (347)
|+..++..+.....+.+ ... ..+.|++.+|+-...+ ..|..-++.... ...+.. ..+ ..|+
T Consensus 169 Iy~~~l~g~~~~~l~~~---~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~-----~~~Lt~------~~~--~~~~ 231 (302)
T 3s25_A 169 LYRYDTASQSEALFYDC---NCY-KPVVLDDTNVYYMDVNRDNAIVHVNINNPN-----PVVLTE------ANI--EHYN 231 (302)
T ss_dssp EEEEETTTTEEEEEECS---CEE-EEEEEETTEEEEEEGGGTTEEEEECSSSCC-----CEECSC------SCE--EEEE
T ss_pred EEEEECCCCCEEEEeCC---Ccc-ceeeecCCEEEEEEcCCCcEEEEEECCCCC-----eEEEeC------CCc--ceEE
Confidence 99888876654433332 222 3356888888765443 245555554211 122211 112 2378
Q ss_pred CCCCEEEEee--CCCeEEEEeCCCc
Q 019006 286 PDGSKVTAGS--SDRMVYIWDTTSR 308 (347)
Q Consensus 286 ~~g~~l~sgs--~dg~i~vwd~~~~ 308 (347)
|++.+|.-++ ..+.|..-++...
T Consensus 232 ~~g~~Iy~~~~~~~~~i~~~~~DG~ 256 (302)
T 3s25_A 232 VYGSLIFYQRGGDNPALCVVKNDGT 256 (302)
T ss_dssp EETTEEEEEECSSSCEEEEEETTSC
T ss_pred ECCCEEEEEECCCCcEEEEEECCCC
Confidence 8898887653 3456777777543
No 329
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=95.09 E-value=1.4 Score=37.69 Aligned_cols=62 Identities=11% Similarity=0.195 Sum_probs=37.5
Q ss_pred cccEEEEEECCCCCeEEEeeCCCcEEEEeccCCCe-eeEEE----eCcccceeEEEEcCC---CCEEEEe
Q 019006 57 QSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCK-NFMVL----KGHKNAILDLHWTTD---GSQIISA 118 (347)
Q Consensus 57 ~~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~-~~~~~----~~h~~~v~~~~~~~~---~~~l~s~ 118 (347)
-.....|+|.|+|+.|.++...|.|++++..+... .+..+ .........|+++|+ +..|+.+
T Consensus 17 l~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~ 86 (353)
T 2g8s_A 17 LDHPWALAFLPDNHGMLITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLS 86 (353)
T ss_dssp ESSEEEEEECSTTCCEEEEETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEE
T ss_pred CCCcEEEEEcCCCCEEEEEeCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEE
Confidence 34678999999999344555679999887543211 11101 112345689999996 4555444
No 330
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=95.07 E-value=1.2 Score=36.91 Aligned_cols=210 Identities=12% Similarity=0.034 Sum_probs=97.5
Q ss_pred EEEEecC--CCeEEEEECCCCceee--eeeccCcceeEeecCCCCCCEEEEEcCC----CceEEEeCCCCCcee--ecCC
Q 019006 114 QIISASP--DKTLRAWDVETGKQIK--KMAEHNSFVNSCCPSRRGPPLVVSGSDD----GTAKLWDMRQRGAIQ--TFPD 183 (347)
Q Consensus 114 ~l~s~~~--dg~i~iwd~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~~~s~~~d----~~i~iwd~~~~~~~~--~~~~ 183 (347)
.++.|+. ...+.+||..+.+-.. .+....... .++.. +..+++.|+.+ ..+.+||..+..-.. .++.
T Consensus 14 l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~~--~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~ 90 (306)
T 3ii7_A 14 RIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDA-ACVFW--DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPT 90 (306)
T ss_dssp EEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSC-EEEEE--TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSS
T ss_pred EEEEeCCCCCceEEEecCCCCCEecCCCCCccccee-EEEEE--CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCc
Confidence 3444544 3568888887764321 111111111 11111 33466677654 567788887654322 2222
Q ss_pred C-CceEEEEEcCCCCeEEEEecC------CcEEEEeCCCCceEEEecCCCC-ceeEEEECCCCCEEEEEcC---------
Q 019006 184 K-YQITAVSFSDASDKIYTGGID------NDVKVWDLRKGEVSMTLQGHQD-MITGMSLSPDGSYLLTNGM--------- 246 (347)
Q Consensus 184 ~-~~v~~~~~~~~~~~l~~~~~d------g~i~iwd~~~~~~~~~~~~~~~-~i~~v~~~~~~~~l~t~~~--------- 246 (347)
. .....+.+ ++..++.|+.+ ..+.+||..+.+-...-..... .-.+++. .+++.++.||.
T Consensus 91 ~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~ 167 (306)
T 3ii7_A 91 PRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVE-ANGLIYVCGGSLGNNVSGRV 167 (306)
T ss_dssp CCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCEESCTTTCEE
T ss_pred cccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEE-ECCEEEEECCCCCCCCcccc
Confidence 1 12222233 45566667654 4588999887642221111111 1112222 24566666653
Q ss_pred CCcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEEEEeeCC-----CeEEEEeCCCceee--EEecCCcc
Q 019006 247 DCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSD-----RMVYIWDTTSRRIL--YKLPGHTG 319 (347)
Q Consensus 247 d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~d-----g~i~vwd~~~~~~~--~~~~~h~~ 319 (347)
-..+.+||.... .. ..+....... .....+.+ ++++++.|+.+ ..+.+||..+.+-. ..++....
T Consensus 168 ~~~~~~yd~~~~----~W-~~~~~~p~~r-~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~ 239 (306)
T 3ii7_A 168 LNSCEVYDPATE----TW-TELCPMIEAR-KNHGLVFV--KDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGV 239 (306)
T ss_dssp CCCEEEEETTTT----EE-EEECCCSSCC-BSCEEEEE--TTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBS
T ss_pred cceEEEeCCCCC----eE-EECCCccchh-hcceEEEE--CCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCcc
Confidence 345778887632 11 1121111100 11111222 56677777653 46889998876432 12221111
Q ss_pred CeeeEEEcCCCCEEEEecCC
Q 019006 320 SVNESVFHATEPVIGSCSSD 339 (347)
Q Consensus 320 ~v~~~~~~~~~~~l~s~s~D 339 (347)
....+.+ ++++++.+|.+
T Consensus 240 ~~~~~~~--~~~i~v~GG~~ 257 (306)
T 3ii7_A 240 TVKCAAV--GSIVYVLAGFQ 257 (306)
T ss_dssp CCEEEEE--TTEEEEEECBC
T ss_pred ceeEEEE--CCEEEEEeCcC
Confidence 1222222 66788888765
No 331
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=94.79 E-value=1.6 Score=36.66 Aligned_cols=190 Identities=11% Similarity=0.130 Sum_probs=99.8
Q ss_pred CCCEEEEecCCCeEEEEECCCCceee---------eeeccCcceeEeecCCCCCCEEEEEcCCCceEEE---eCCCC---
Q 019006 111 DGSQIISASPDKTLRAWDVETGKQIK---------KMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLW---DMRQR--- 175 (347)
Q Consensus 111 ~~~~l~s~~~dg~i~iwd~~~~~~~~---------~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iw---d~~~~--- 175 (347)
+...+++.+.+|.|+--.+...+... .+... ..+..+...... ..++..+..|.+.-+ +++..
T Consensus 2 ~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~ke~-D~l~~~~~~~~~-~~ll~fT~~G~~~~~~~~elp~~~~~ 79 (307)
T 1zi0_A 2 QEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEE-DFIDRLLVANTH-DHILCFSSRGRVYSMKVYQLPEATRG 79 (307)
T ss_dssp CCEEEEEEETTSEEEEEECC---------------------CCEEEEEEEETT-CEEEEEETTSEEEEEEGGGSCCCCSS
T ss_pred CCcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeCCC-CEEEEEEEECCC-CEEEEEECCCEEEEEEhhHCcCCCCC
Confidence 44567888888888877665432111 11122 222222211222 234555667775554 33322
Q ss_pred ---Ccee---ecCCCCceEEEEE-c--CCCCeEEEEecCCcEEEEeCCC-------CceEEEecCCCCceeEEEECCCCC
Q 019006 176 ---GAIQ---TFPDKYQITAVSF-S--DASDKIYTGGIDNDVKVWDLRK-------GEVSMTLQGHQDMITGMSLSPDGS 239 (347)
Q Consensus 176 ---~~~~---~~~~~~~v~~~~~-~--~~~~~l~~~~~dg~i~iwd~~~-------~~~~~~~~~~~~~i~~v~~~~~~~ 239 (347)
.++. .+.....|..+.. . .++.+++..+.+|.++--.+.. +.....+..+ +.+..+.......
T Consensus 80 a~G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~-d~lv~~~~~~~~~ 158 (307)
T 1zi0_A 80 ARGRPIVNLLPLEQDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDG-DELIGVDLTSGED 158 (307)
T ss_dssp SCCEEGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTT-CCEEEEEEECTTC
T ss_pred CCCeEhhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCC-CEEEEEEEeCCCC
Confidence 1111 1233345555433 2 3456788999999999886531 2222334444 4555555444556
Q ss_pred EEEEEcCCCcEEEEeCCCCCCcCc---eeEEEeccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCC
Q 019006 240 YLLTNGMDCKLCIWDMRPYAPQNR---CVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTT 306 (347)
Q Consensus 240 ~l~t~~~d~~i~~wd~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~ 306 (347)
.++..+.+|.+..++........+ -+..+. ..-.+.+..+..-+++..|+..+..|.++..++.
T Consensus 159 ~i~l~T~~G~~irf~~~~v~~~gr~a~Gv~~i~---L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Kr~~~~ 225 (307)
T 1zi0_A 159 EVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIR---LGEGDKVVSLIVPRGDGAILTATQNGYGKRTAVA 225 (307)
T ss_dssp EEEEEETTSEEEEEEGGGSCBCCTTCCCEECCC---CCTTCCEEEEECCCSSCEEEEEETTSEEEEECGG
T ss_pred EEEEECCCCcEEEEEHHHcCccCCCCCCeEeEE---eCCCCEEEEEEEecCCCEEEEEEcCCceEEEEHH
Confidence 777788888888887654332222 111111 1112456666554566788999999999988763
No 332
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=94.79 E-value=1.5 Score=36.37 Aligned_cols=184 Identities=13% Similarity=0.190 Sum_probs=87.4
Q ss_pred CCCEEEEecCC-----CeEEEEECCCCceee--eeeccCcceeEeecCCCCCCEEEEEcCCC-----ceEEEeCCCCCce
Q 019006 111 DGSQIISASPD-----KTLRAWDVETGKQIK--KMAEHNSFVNSCCPSRRGPPLVVSGSDDG-----TAKLWDMRQRGAI 178 (347)
Q Consensus 111 ~~~~l~s~~~d-----g~i~iwd~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~~~s~~~d~-----~i~iwd~~~~~~~ 178 (347)
++..++.|+.+ ..+.+||..+.+-.. .+...... ..++.. +..+++.|+.++ .+.+||+.+..-.
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~ 137 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRST-LGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSNEWF 137 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBS-CEEEEE--TTEEEEEEEECSSCEEEEEEEEETTTTEEE
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccc-eEEEEE--CCEEEEEcCCCCCccCceEEEEeCCCCeEe
Confidence 55666777654 357888887654321 11111111 111111 234666666543 4667887765432
Q ss_pred ee--cCCC-CceEEEEEcCCCCeEEEEec-------CCcEEEEeCCCCceEEE--ecCCCCceeEEEECCCCCEEEEEcC
Q 019006 179 QT--FPDK-YQITAVSFSDASDKIYTGGI-------DNDVKVWDLRKGEVSMT--LQGHQDMITGMSLSPDGSYLLTNGM 246 (347)
Q Consensus 179 ~~--~~~~-~~v~~~~~~~~~~~l~~~~~-------dg~i~iwd~~~~~~~~~--~~~~~~~i~~v~~~~~~~~l~t~~~ 246 (347)
.. ++.. .....+.+ ++..++.|+. ...+.+||+.+.+-... +..... -.+++. .++..++.||.
T Consensus 138 ~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~-~~~~~~-~~~~iyv~GG~ 213 (302)
T 2xn4_A 138 HVAPMNTRRSSVGVGVV--GGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRS-GAGVGV-LNNLLYAVGGH 213 (302)
T ss_dssp EECCCSSCCBSCEEEEE--TTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCB-SCEEEE-ETTEEEEECCB
T ss_pred ecCCCCCcccCceEEEE--CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccc-cccEEE-ECCEEEEECCC
Confidence 22 2221 11222222 4455556654 24588999877642221 111111 112222 25666677765
Q ss_pred C-----CcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEEEEeeCCC-----eEEEEeCCCce
Q 019006 247 D-----CKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDR-----MVYIWDTTSRR 309 (347)
Q Consensus 247 d-----~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg-----~i~vwd~~~~~ 309 (347)
+ ..+.+||.... .. ..+....... .....+. .++++++.|+.++ .+.+||..+.+
T Consensus 214 ~~~~~~~~~~~yd~~~~----~W-~~~~~~~~~r-~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 278 (302)
T 2xn4_A 214 DGPLVRKSVEVYDPTTN----AW-RQVADMNMCR-RNAGVCA--VNGLLYVVGGDDGSCNLASVEYYNPTTDK 278 (302)
T ss_dssp SSSSBCCCEEEEETTTT----EE-EEECCCSSCC-BSCEEEE--ETTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred CCCcccceEEEEeCCCC----CE-eeCCCCCCcc-ccCeEEE--ECCEEEEECCcCCCcccccEEEEcCCCCe
Confidence 4 36888887632 11 1121111100 1111111 2667777777553 48899987764
No 333
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=94.79 E-value=1.1 Score=38.15 Aligned_cols=40 Identities=5% Similarity=-0.163 Sum_probs=20.8
Q ss_pred eEEEEeCCCce--eeEEecCCccCeeeEEEcCCCCEEEEecCCC
Q 019006 299 MVYIWDTTSRR--ILYKLPGHTGSVNESVFHATEPVIGSCSSDK 340 (347)
Q Consensus 299 ~i~vwd~~~~~--~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~ 340 (347)
.+.+||+.+.+ .+..++..... ..+...++++++.+|.++
T Consensus 286 ~~~~yd~~~~~W~~~~~~p~~r~~--~~~~~~~~~i~v~GG~~~ 327 (357)
T 2uvk_A 286 STDIHLWHNGKWDKSGELSQGRAY--GVSLPWNNSLLIIGGETA 327 (357)
T ss_dssp CCEEEECC---CEEEEECSSCCBS--SEEEEETTEEEEEEEECG
T ss_pred eEEEEecCCCceeeCCCCCCCccc--ceeEEeCCEEEEEeeeCC
Confidence 57789987654 23333322221 223345678888888654
No 334
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=94.64 E-value=2 Score=37.11 Aligned_cols=193 Identities=11% Similarity=0.114 Sum_probs=102.2
Q ss_pred cCCCCEEEEecCCCeEEEEECCCC---------ceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEE---eCCCC-
Q 019006 109 TTDGSQIISASPDKTLRAWDVETG---------KQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLW---DMRQR- 175 (347)
Q Consensus 109 ~~~~~~l~s~~~dg~i~iwd~~~~---------~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iw---d~~~~- 175 (347)
-|+...+++.+.+|.|+--.+... .....+.. ...+..+...... ..++..+..|.+.-+ +++..
T Consensus 4 I~~e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~lke-~D~l~~~~~~~t~-d~ll~fT~~G~~~~~~~~eip~~~ 81 (370)
T 3l6v_A 4 IAPEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTKE-EDFIDQLWLVNTH-DTLLTFTSSGKVFWLPVHQLPEAG 81 (370)
T ss_dssp CCCCCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEECSC-CCCEEEEEEECTT-CEEEEEETTSEEEEEEGGGSCBCC
T ss_pred ccCCCEEEEEeCCCEEEEeeHHHhhhhccCCCCceecccCC-CCEEEEEEEecCC-CEEEEEeCCCeEEEEEHHHCcCCC
Confidence 356778899999999987654321 11122222 2333333322233 334445666766544 44322
Q ss_pred -----Ccee---ecCCCCceEEEE-Ec--CCCCeEEEEecCCcEEEEeCCC-------CceEEEecCCCCceeEEEECCC
Q 019006 176 -----GAIQ---TFPDKYQITAVS-FS--DASDKIYTGGIDNDVKVWDLRK-------GEVSMTLQGHQDMITGMSLSPD 237 (347)
Q Consensus 176 -----~~~~---~~~~~~~v~~~~-~~--~~~~~l~~~~~dg~i~iwd~~~-------~~~~~~~~~~~~~i~~v~~~~~ 237 (347)
..+. .+.....|..+. +. ....+++.++..|.++.-.+.. +.....+.. .+.+..+.....
T Consensus 82 r~a~G~~i~~ll~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~-~d~lv~v~~~~~ 160 (370)
T 3l6v_A 82 SNARGRPIINWIPLESGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDE-GDALVGVALTDG 160 (370)
T ss_dssp TTSCCEEGGGSCCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCT-TCCEEEEEEECS
T ss_pred cccCCcCHhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCC-CCEEEEEEEeCC
Confidence 1111 123334555544 33 2356899999999999876532 222233433 344545554455
Q ss_pred CCEEEEEcCCCcEEEEeCCCCCCcCce---eEEEeccccccccceEEEEECC----------------------------
Q 019006 238 GSYLLTNGMDCKLCIWDMRPYAPQNRC---VKILEGHQHNFEKNLLKCGWSP---------------------------- 286 (347)
Q Consensus 238 ~~~l~t~~~d~~i~~wd~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~s~---------------------------- 286 (347)
...++..+.+|.+..++.......++. ++.++- .-.+.+..+..-+
T Consensus 161 ~~~i~l~T~~G~~irf~~~~v~~~gR~a~GV~~i~L---~~~d~Vv~~~~~~~~~~~~~~~~~~~~~~~~~t~~g~~~~~ 237 (370)
T 3l6v_A 161 DRDVLLFASNGKTVRFGESTVRSMGRTATGVRGIRL---AKGEEVVSLIVSERAGGVEDEVEDESAEEVVETTDGAEPAV 237 (370)
T ss_dssp CCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCC---CTTCCEEEEEEECCC--------------------------
T ss_pred CceEEEEeCCCeEEEEEccccCccCCCCCCeeeEEe---CCCCEEEEEEEeccccccccccccccccccccccccccccc
Confidence 567788888888888876543322221 111111 1123344443322
Q ss_pred -------CCCEEEEeeCCCeEEEEeCCC
Q 019006 287 -------DGSKVTAGSSDRMVYIWDTTS 307 (347)
Q Consensus 287 -------~g~~l~sgs~dg~i~vwd~~~ 307 (347)
++..|++.+..|+.+...+..
T Consensus 238 ~~~~~~~~~~~il~vTe~G~gKrt~~~e 265 (370)
T 3l6v_A 238 IDVADNGDVAYILTATENGYGKRTPLAE 265 (370)
T ss_dssp ---------CEEEEEETTSEEEEEEGGG
T ss_pred cccccccCCceEEEeeCCCCEEEEEHHH
Confidence 456899999999999987643
No 335
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=94.60 E-value=1.7 Score=36.27 Aligned_cols=209 Identities=11% Similarity=0.057 Sum_probs=94.3
Q ss_pred EEEecCCCeEEEEECCCCceee-eeecc-CcceeEeecCCCCCCEEEEEcC-----C------CceEEEeCCCCCcee--
Q 019006 115 IISASPDKTLRAWDVETGKQIK-KMAEH-NSFVNSCCPSRRGPPLVVSGSD-----D------GTAKLWDMRQRGAIQ-- 179 (347)
Q Consensus 115 l~s~~~dg~i~iwd~~~~~~~~-~~~~~-~~~v~~~~~~~~~~~~~~s~~~-----d------~~i~iwd~~~~~~~~-- 179 (347)
++.|+ ..+.+||..+.+-.. .+... ...-.+++. .+..+++.|+. . ..+..||..+..-..
T Consensus 8 ~~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~ 83 (315)
T 4asc_A 8 FMISE--EGAVAYDPAANECYCASLSSQVPKNHVSLVT--KENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMP 83 (315)
T ss_dssp EEEET--TEEEEEETTTTEEEEEECCCCSCSSEEEEEC--TTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECC
T ss_pred EEEcC--CceEEECCCCCeEecCCCCCCCCccceEEEE--ECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECC
Confidence 34444 568889988766422 11111 111112222 23456676763 1 126678887654322
Q ss_pred ecCCC-CceEEEEEcCCCCeEEEEecC--------CcEEEEeCCCCceEE--EecCCCCceeEEEECCCCCEEEEEcC-C
Q 019006 180 TFPDK-YQITAVSFSDASDKIYTGGID--------NDVKVWDLRKGEVSM--TLQGHQDMITGMSLSPDGSYLLTNGM-D 247 (347)
Q Consensus 180 ~~~~~-~~v~~~~~~~~~~~l~~~~~d--------g~i~iwd~~~~~~~~--~~~~~~~~i~~v~~~~~~~~l~t~~~-d 247 (347)
.++.. .....+.+ ++..++.|+.+ ..+.+||..+.+-.. .+.... .-.+++. .+++.++.||. +
T Consensus 84 ~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r-~~~~~~~-~~~~iyv~GG~~~ 159 (315)
T 4asc_A 84 PLPSPRCLFGLGEA--LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVV-YGHTVLS-HMDLVYVIGGKGS 159 (315)
T ss_dssp CBSSCEESCEEEEE--TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCC-BSCEEEE-ETTEEEEECCBCT
T ss_pred CCCcchhceeEEEE--CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcc-cceeEEE-ECCEEEEEeCCCC
Confidence 12211 11122222 44555666632 458899988764221 111111 1112222 34566666665 2
Q ss_pred -----CcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEEEEeeCCC-----eEEEEeCCCceeeEEecCC
Q 019006 248 -----CKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDR-----MVYIWDTTSRRILYKLPGH 317 (347)
Q Consensus 248 -----~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg-----~i~vwd~~~~~~~~~~~~h 317 (347)
..+.+||.... .. ..+...... ......+. -++++++.|+.++ .+.+||..+.+-...-+-.
T Consensus 160 ~~~~~~~~~~yd~~~~----~W-~~~~~~p~~-r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p 231 (315)
T 4asc_A 160 DRKCLNKMCVYDPKKF----EW-KELAPMQTA-RSLFGATV--HDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFP 231 (315)
T ss_dssp TSCBCCCEEEEETTTT----EE-EECCCCSSC-CBSCEEEE--ETTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCS
T ss_pred CCcccceEEEEeCCCC----eE-EECCCCCCc-hhceEEEE--ECCEEEEEeccCCCCccceEEEEECCCCeEEECCCCC
Confidence 35788887632 11 111111100 01111122 2567777777554 5888998876433211111
Q ss_pred ccCeeeEEEcCCCCEEEEecCC
Q 019006 318 TGSVNESVFHATEPVIGSCSSD 339 (347)
Q Consensus 318 ~~~v~~~~~~~~~~~l~s~s~D 339 (347)
.......+..-++++++.+|.+
T Consensus 232 ~~r~~~~~~~~~~~l~v~GG~~ 253 (315)
T 4asc_A 232 QERSSLSLVSLVGTLYAIGGFA 253 (315)
T ss_dssp SCCBSCEEEEETTEEEEEEEEE
T ss_pred CcccceeEEEECCEEEEECCcc
Confidence 1111111222356777777764
No 336
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=94.34 E-value=1.9 Score=35.82 Aligned_cols=172 Identities=11% Similarity=0.087 Sum_probs=81.0
Q ss_pred CCEEEEEcC----C-----CceEEEeCCCCCceee--cCCC-CceEEEEEcCCCCeEEEEecC-----CcEEEEeCCCCc
Q 019006 155 PPLVVSGSD----D-----GTAKLWDMRQRGAIQT--FPDK-YQITAVSFSDASDKIYTGGID-----NDVKVWDLRKGE 217 (347)
Q Consensus 155 ~~~~~s~~~----d-----~~i~iwd~~~~~~~~~--~~~~-~~v~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~ 217 (347)
..+++.|+. + ..+.+||..+..-... ++.. .....+.+ ++..++.|+.+ ..+.+||+.+.+
T Consensus 71 ~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 148 (308)
T 1zgk_A 71 GLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDE 148 (308)
T ss_dssp TEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTTE
T ss_pred CEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCe
Confidence 346666654 2 4578888876542221 2211 12222333 45566666643 468899987664
Q ss_pred eEEE--ecCCCCceeEEEECCCCCEEEEEcCC-----CcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCE
Q 019006 218 VSMT--LQGHQDMITGMSLSPDGSYLLTNGMD-----CKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSK 290 (347)
Q Consensus 218 ~~~~--~~~~~~~i~~v~~~~~~~~l~t~~~d-----~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~ 290 (347)
-... +......-..+.+ ++..++.||.+ ..+.+||+... .. ..+...... ......+.+ ++.+
T Consensus 149 W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~----~W-~~~~~~p~~-r~~~~~~~~--~~~i 218 (308)
T 1zgk_A 149 WHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERN----EW-RMITAMNTI-RSGAGVCVL--HNCI 218 (308)
T ss_dssp EEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTT----EE-EECCCCSSC-CBSCEEEEE--TTEE
T ss_pred EeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCC----eE-eeCCCCCCc-cccceEEEE--CCEE
Confidence 2221 1111111112222 55666666654 35788887532 11 111111100 011112222 5677
Q ss_pred EEEeeCC-----CeEEEEeCCCceeeE--EecCCccCeeeEEEcCCCCEEEEecCCC
Q 019006 291 VTAGSSD-----RMVYIWDTTSRRILY--KLPGHTGSVNESVFHATEPVIGSCSSDK 340 (347)
Q Consensus 291 l~sgs~d-----g~i~vwd~~~~~~~~--~~~~h~~~v~~~~~~~~~~~l~s~s~D~ 340 (347)
++.|+.+ ..+.+||+.+.+-.. .++.....- .++ .-++++++.+|.++
T Consensus 219 yv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~-~~~-~~~~~i~v~GG~~~ 273 (308)
T 1zgk_A 219 YAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSAL-GIT-VHQGRIYVLGGYDG 273 (308)
T ss_dssp EEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSC-EEE-EETTEEEEECCBCS
T ss_pred EEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccce-EEE-EECCEEEEEcCcCC
Confidence 7777654 569999988764322 122111111 122 23567888887653
No 337
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=94.15 E-value=1.7 Score=34.42 Aligned_cols=146 Identities=8% Similarity=-0.019 Sum_probs=75.7
Q ss_pred ceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeecCCCCc--------eEEEEEcCCCCeEEEEecCCcEEEEeCCC
Q 019006 144 FVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ--------ITAVSFSDASDKIYTGGIDNDVKVWDLRK 215 (347)
Q Consensus 144 ~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~~~~~--------v~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 215 (347)
.+..+++++++ .+.+. .+|.+.-.+..+.....-+..... ..++.|++++.+.++ .||.|+-++..+
T Consensus 42 ~~~~laf~P~G-~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~ 116 (236)
T 1tl2_A 42 NFKFLFLSPGG-ELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQ 116 (236)
T ss_dssp TCSEEEECTTS-CEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCC
T ss_pred cceeEEECCCc-cEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCc
Confidence 44577888844 44444 667666555543221111111112 377889998877666 669998887543
Q ss_pred CceE------EEe-cCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCce---eEEEeccccccccceEEEEEC
Q 019006 216 GEVS------MTL-QGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRC---VKILEGHQHNFEKNLLKCGWS 285 (347)
Q Consensus 216 ~~~~------~~~-~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~s 285 (347)
.... ..+ ..--..+..|.|.|+|...+.. |+.+.- ...+....... ...+. .. . -....-+.|.
T Consensus 117 ~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr-~~~P~~~~~~wl~~~~~~g-~~-g-~~~yr~l~f~ 190 (236)
T 1tl2_A 117 SDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYK-ALPPVSNQDNWLARATKIG-QG-G-WDTFKFLFFS 190 (236)
T ss_dssp STTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEE-ECCCSSTTCCHHHHCEEEE-SS-S-GGGEEEEEEC
T ss_pred CCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEe-cCCCCCCCcccccccceec-cC-C-cceEEEEEEC
Confidence 2111 111 1112357899999999977776 666433 22221111110 11111 00 0 1233445688
Q ss_pred CCCCEEEEeeCCCeEEE
Q 019006 286 PDGSKVTAGSSDRMVYI 302 (347)
Q Consensus 286 ~~g~~l~sgs~dg~i~v 302 (347)
++|.+.++. +|.++-
T Consensus 191 ~~G~l~~v~--~g~~Y~ 205 (236)
T 1tl2_A 191 SVGTLFGVQ--GGKFYE 205 (236)
T ss_dssp TTSCEEEEE--TTEEEE
T ss_pred CCCcEEEEe--CCeEEe
Confidence 888777666 664443
No 338
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=94.12 E-value=2.3 Score=35.88 Aligned_cols=192 Identities=11% Similarity=0.054 Sum_probs=101.1
Q ss_pred CCCCEEEEecCCCeEEEEECCCCc----eeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEE---eCCCC------C
Q 019006 110 TDGSQIISASPDKTLRAWDVETGK----QIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLW---DMRQR------G 176 (347)
Q Consensus 110 ~~~~~l~s~~~dg~i~iwd~~~~~----~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iw---d~~~~------~ 176 (347)
|+...+++.+.+|.|+--.+...+ ....+... ..+..+...... ..++..+..|.+.-+ +++.. .
T Consensus 3 ~~e~~~v~lT~~G~IKr~~~~~~~~~~~~~~~lke~-D~l~~~~~~~t~-d~ll~fT~~Gr~~~~~~~elp~~~r~a~G~ 80 (323)
T 1wp5_A 3 ASEDVIVTVTKDGYVKRTSLRSYAASNGQDFAMKDT-DRLLAMLEMNTK-DVLLLFTNKGNYLYCPVHELPDIRWKDLGQ 80 (323)
T ss_dssp SCCEEEEEEETTCEEEEEEHHHHHHTTTCCCCCCTT-CCEEEEEEEETT-SEEEEEETTSEEEEEEGGGSCBCCTTSCCE
T ss_pred cCCcEEEEEeCCCEEEEeEHHHhhhcCccccccCCC-CEEEEEEEECCC-CEEEEEECCCEEEEEEHHHCcCCCCCCCCc
Confidence 455678888899988876543211 11112222 222222222222 234455666775544 33321 1
Q ss_pred cee---ecCCCCceEEE-EEcC--CCCeEEEEecCCcEEEEeCC--------CCceEEEecCCCCceeEEEECCCCCEEE
Q 019006 177 AIQ---TFPDKYQITAV-SFSD--ASDKIYTGGIDNDVKVWDLR--------KGEVSMTLQGHQDMITGMSLSPDGSYLL 242 (347)
Q Consensus 177 ~~~---~~~~~~~v~~~-~~~~--~~~~l~~~~~dg~i~iwd~~--------~~~~~~~~~~~~~~i~~v~~~~~~~~l~ 242 (347)
++. .+.....|..+ ...+ ++.+++..+.+|.++.-.+. .+.....+... +.+..+........++
T Consensus 81 ~i~~~i~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e~-d~lv~~~~~~~~~~i~ 159 (323)
T 1wp5_A 81 HIANIIPIDRDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKND-DQVVDVHLTDGMNELF 159 (323)
T ss_dssp EGGGTSCCCTTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCTT-CCEEEEEEECSCSEEE
T ss_pred ChhhccCCCCCCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCCC-CEEEEEEEeCCCCEEE
Confidence 111 12233345544 3432 25678899999999988763 12222233332 4555555544556788
Q ss_pred EEcCCCcEEEEeCCCCCCcCc---eeEEEeccccccccceEEEEECCCCC-EEEEeeCCCeEEEEeCCC
Q 019006 243 TNGMDCKLCIWDMRPYAPQNR---CVKILEGHQHNFEKNLLKCGWSPDGS-KVTAGSSDRMVYIWDTTS 307 (347)
Q Consensus 243 t~~~d~~i~~wd~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~s~~g~-~l~sgs~dg~i~vwd~~~ 307 (347)
..+.+|.+..++.....+.++ -++.++- .-.+.+..+..-+++. .|+..+..|..+..++..
T Consensus 160 l~T~~G~~irf~~~ev~~~gR~a~GV~~i~L---~~~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~e 225 (323)
T 1wp5_A 160 LVTHNGYALWFDESEVSIVGVRAAGVKGMNL---KEGDYIVSGQLITSKDESIVVATQRGAVKKMKLTE 225 (323)
T ss_dssp EEETTSEEEEEEGGGSCBCCSSCCCEECCCC---CTTCCEEEEEEECCTTCEEEEEETTSEEEEEEGGG
T ss_pred EEeCCCcEEEEEHHHCcccCCCCcCEEEEEe---CCCCEEEEEEEEcCCCcEEEEEECCCceEEEEHHH
Confidence 888899888887754332222 1222211 1123455554334444 788889999988877644
No 339
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=94.05 E-value=2.4 Score=35.83 Aligned_cols=182 Identities=16% Similarity=0.152 Sum_probs=96.1
Q ss_pred CCEEEEEcCCCceEEEeCCCC-----Cce--eecCCCCceEEEEEcCCCCeEEEEecCCcEEEEeCC--C---------C
Q 019006 155 PPLVVSGSDDGTAKLWDMRQR-----GAI--QTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLR--K---------G 216 (347)
Q Consensus 155 ~~~~~s~~~d~~i~iwd~~~~-----~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~--~---------~ 216 (347)
...++..+.+|.++--.+..- .-+ ..+.....+..+........++..+..|.+..+... . |
T Consensus 109 e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke~D~lv~~~~~~~~d~ill~T~~G~~~rf~~~~~eip~~gr~a~G 188 (327)
T 3uc1_A 109 APYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRDNDELVGAVLCSAGDDLLLVSANGQSIRFSATDEALRPMGRATSG 188 (327)
T ss_dssp SSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCTTCCEEEEEEECTTCEEEEEETTSEEEEEECCTTTSCCCCTTSBC
T ss_pred CCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECCCCEEEEEEEecCCCEEEEEECCCeEEEEECcccccCcCCcCCCC
Confidence 457888999999998765421 111 123334455555554556778888999998887665 2 1
Q ss_pred ceEEEecCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCc---eeEEEeccccccccceEEEEECCCCCEEEE
Q 019006 217 EVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNR---CVKILEGHQHNFEKNLLKCGWSPDGSKVTA 293 (347)
Q Consensus 217 ~~~~~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s 293 (347)
.....+.. .+.|.++..-+.+.+++..+..|.++.-.+..+....+ -+..++-.. -.+.+..+....+...++.
T Consensus 189 v~~i~L~~-~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~~~l~~--~~d~lv~~~~~~~~~~i~l 265 (327)
T 3uc1_A 189 VQGMRFNI-DDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTVMYDR--RRGRLVGALIVDDDSELYA 265 (327)
T ss_dssp EESSCCCT-TCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEESSCCCT--TTCSEEEEEEECTTCEEEE
T ss_pred eeeecCCC-CCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCCCcEEEEEecC--CCCeEEEEEEeCCCccEEE
Confidence 11122322 34577766666677899999999999888765543322 111121110 0123444443344566777
Q ss_pred eeCCCeEEEEeCCCcee---------eEEecCCccCeeeEEEcCC-CCEEEEecCCC
Q 019006 294 GSSDRMVYIWDTTSRRI---------LYKLPGHTGSVNESVFHAT-EPVIGSCSSDK 340 (347)
Q Consensus 294 gs~dg~i~vwd~~~~~~---------~~~~~~h~~~v~~~~~~~~-~~~l~s~s~D~ 340 (347)
.+.+|.+..++...-.. +.++.. ...|..++..+. ...+.+.+.+|
T Consensus 266 ~T~~G~~ir~~~~~i~~~gR~a~GV~~i~l~~-~d~vv~~~~~~~~~~~~~~~~~~g 321 (327)
T 3uc1_A 266 VTSGGGVIRTAARQVRKAGRQTKGVRLMNLGE-GDTLLAIARNAEESGDDNAVDANG 321 (327)
T ss_dssp EEGGGCEEEEEGGGSCBCCTTSCCEECTTCCT-TCCEEEEEECC-------------
T ss_pred EcCCCeEEEEehhhccccCCCCCCeEeEecCC-CCEEEEEEEcCCCcceEEEEecCC
Confidence 78888888886543221 112221 345555555443 34455565554
No 340
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=93.52 E-value=1.3 Score=45.12 Aligned_cols=175 Identities=10% Similarity=0.143 Sum_probs=96.5
Q ss_pred CcEEEEeccCCCeeeEEEeCc----ccceeEEEEcCCCCEEEEec-------CCCeEEEEECCCCceeeeeeccCcceeE
Q 019006 79 RDIFLWHVHGDCKNFMVLKGH----KNAILDLHWTTDGSQIISAS-------PDKTLRAWDVETGKQIKKMAEHNSFVNS 147 (347)
Q Consensus 79 ~~v~~w~~~~~~~~~~~~~~h----~~~v~~~~~~~~~~~l~s~~-------~dg~i~iwd~~~~~~~~~~~~~~~~v~~ 147 (347)
..|+-|++.++..+...+..| ...|..-.-+++.+.++..| -.|.+.+|.++.+. .+.+.+|......
T Consensus 125 ~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~-sQ~iegha~~F~~ 203 (1630)
T 1xi4_A 125 NAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGHAASFAQ 203 (1630)
T ss_pred CeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccccc-chhhhHhHhhhhe
Confidence 468999997655554444444 34677777788888766443 34788898876542 2233344322111
Q ss_pred eec--CCCCCCEEEEEcC---CCceEEEeCCCC----Ccee------ecCC---CCceEEEEEcCCCCeEEEEecCCcEE
Q 019006 148 CCP--SRRGPPLVVSGSD---DGTAKLWDMRQR----GAIQ------TFPD---KYQITAVSFSDASDKIYTGGIDNDVK 209 (347)
Q Consensus 148 ~~~--~~~~~~~~~s~~~---d~~i~iwd~~~~----~~~~------~~~~---~~~v~~~~~~~~~~~l~~~~~dg~i~ 209 (347)
... .+....+++.+.. .+++.+.++... .... .++. ..-..++..++..+.++.-+.-|.|.
T Consensus 204 ~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~ 283 (1630)
T 1xi4_A 204 FKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIH 283 (1630)
T ss_pred eccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEE
Confidence 111 1111223333322 268888887532 1110 1121 11234567777788889999999999
Q ss_pred EEeCCCCceEEEecCCCCceeEEEECCCCCEEEEEcCCCcEEEEe
Q 019006 210 VWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWD 254 (347)
Q Consensus 210 iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd 254 (347)
+||+.++.++..-+-..+.|...+-+....-++.....|.|.--.
T Consensus 284 ~~d~~t~~~i~~~ris~~~iF~~~~~~~~~g~~~vnr~G~vl~v~ 328 (1630)
T 1xi4_A 284 LYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVC 328 (1630)
T ss_pred EEecccchhhhhccccCCceEEeccCCCCCceEEEcCCceEEEEE
Confidence 999999987765443344444444333333344444555554433
No 341
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=93.27 E-value=3.1 Score=34.55 Aligned_cols=184 Identities=13% Similarity=0.159 Sum_probs=86.5
Q ss_pred CCCEEEEecC----C-----CeEEEEECCCCceee--eeeccCcceeEeecCCCCCCEEEEEcCC-----CceEEEeCCC
Q 019006 111 DGSQIISASP----D-----KTLRAWDVETGKQIK--KMAEHNSFVNSCCPSRRGPPLVVSGSDD-----GTAKLWDMRQ 174 (347)
Q Consensus 111 ~~~~l~s~~~----d-----g~i~iwd~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~~~s~~~d-----~~i~iwd~~~ 174 (347)
++..++.|+. + ..+.+||..+.+-.. .+....... .++.. +..+++.|+.+ ..+.+||+.+
T Consensus 70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~ 146 (308)
T 1zgk_A 70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRI-GVGVI--DGHIYAVGGSHGCIHHNSVERYEPER 146 (308)
T ss_dssp TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTC-EEEEE--TTEEEEECCEETTEECCCEEEEETTT
T ss_pred CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCcccc-EEEEE--CCEEEEEcCCCCCcccccEEEECCCC
Confidence 4566666665 2 357888887654221 111111111 11111 23466666533 3577888876
Q ss_pred CCceee--cCCC-CceEEEEEcCCCCeEEEEecC-----CcEEEEeCCCCceEEE--ecCCCCceeEEEECCCCCEEEEE
Q 019006 175 RGAIQT--FPDK-YQITAVSFSDASDKIYTGGID-----NDVKVWDLRKGEVSMT--LQGHQDMITGMSLSPDGSYLLTN 244 (347)
Q Consensus 175 ~~~~~~--~~~~-~~v~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~--~~~~~~~i~~v~~~~~~~~l~t~ 244 (347)
..-... ++.. .....+.+ ++..++.|+.+ ..+.+||+.+.+-... +..... -.+++.. ++..++.|
T Consensus 147 ~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~-~~~~~~~-~~~iyv~G 222 (308)
T 1zgk_A 147 DEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRS-GAGVCVL-HNCIYAAG 222 (308)
T ss_dssp TEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCB-SCEEEEE-TTEEEEEC
T ss_pred CeEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccc-cceEEEE-CCEEEEEe
Confidence 542221 2221 12222333 45566666654 4588999876642211 111111 1122222 56666667
Q ss_pred cCC-----CcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEEEEeeCC-----CeEEEEeCCCce
Q 019006 245 GMD-----CKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSD-----RMVYIWDTTSRR 309 (347)
Q Consensus 245 ~~d-----~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~d-----g~i~vwd~~~~~ 309 (347)
|.+ ..+.+||+... .. ..+..... ...-..++. -++++++.|+.+ ..+.+||..+.+
T Consensus 223 G~~~~~~~~~v~~yd~~~~----~W-~~~~~~p~--~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 289 (308)
T 1zgk_A 223 GYDGQDQLNSVERYDVETE----TW-TFVAPMKH--RRSALGITV-HQGRIYVLGGYDGHTFLDSVECYDPDTDT 289 (308)
T ss_dssp CBCSSSBCCCEEEEETTTT----EE-EECCCCSS--CCBSCEEEE-ETTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred CCCCCCccceEEEEeCCCC----cE-EECCCCCC--CccceEEEE-ECCEEEEEcCcCCCcccceEEEEcCCCCE
Confidence 654 46888887632 11 11111110 111111111 256777777643 457888887654
No 342
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=93.20 E-value=3.3 Score=34.72 Aligned_cols=192 Identities=10% Similarity=0.078 Sum_probs=105.1
Q ss_pred CCCCEEEEecCCCeEEEEECCCCceee---------eeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeC---CCC--
Q 019006 110 TDGSQIISASPDKTLRAWDVETGKQIK---------KMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDM---RQR-- 175 (347)
Q Consensus 110 ~~~~~l~s~~~dg~i~iwd~~~~~~~~---------~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~---~~~-- 175 (347)
++...+++.+.+|.|+--.+...+... .+... ..+..+...... ..++..+..|.++-+.. +..
T Consensus 6 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke~-D~l~~~~~~~~~-~~ll~~T~~G~~~~~~~~~ip~~~r 83 (312)
T 1suu_A 6 QKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLNDG-DEIVIALCVNTH-DYLFMISNEGKLYLINAYEIKDSSR 83 (312)
T ss_dssp --CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCTT-CCEEEEEEEETT-CEEEEEETTSEEEEEEGGGSCC---
T ss_pred CCCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCCC-CEEEEEEEECCC-CEEEEEECCCeEEEEEHHHCCCCCc
Confidence 355678888999999887664432111 11222 222222222222 34555677787666543 221
Q ss_pred ----Cce---eecCCCCceEEEEEcC---CCCeEEEEecCCcEEEEeCC-------CCceEEEecCCCCceeEEEECCCC
Q 019006 176 ----GAI---QTFPDKYQITAVSFSD---ASDKIYTGGIDNDVKVWDLR-------KGEVSMTLQGHQDMITGMSLSPDG 238 (347)
Q Consensus 176 ----~~~---~~~~~~~~v~~~~~~~---~~~~l~~~~~dg~i~iwd~~-------~~~~~~~~~~~~~~i~~v~~~~~~ 238 (347)
..+ -.+.....+..+..-+ +..+++..+..|.++.-.+. .|.....+.. .+.+..+.....+
T Consensus 84 ~~~G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~-~d~lv~~~~~~~~ 162 (312)
T 1suu_A 84 ASKGQNISELINLGDQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLND-KDFVTSAEIVFKD 162 (312)
T ss_dssp ----CBGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCT-TCCEEEEEEECTT
T ss_pred cCCCcChhhccCCCCCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCC-CCEEEEEEEeCCC
Confidence 111 1122333454443322 45678889999999888763 2223333443 3455555554556
Q ss_pred CEEEEEcCCCcEEEEeCCCCCCcCc---eeEEEeccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCC
Q 019006 239 SYLLTNGMDCKLCIWDMRPYAPQNR---CVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTS 307 (347)
Q Consensus 239 ~~l~t~~~d~~i~~wd~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~ 307 (347)
..++..+.+|.+..+.........+ -++.++- .-.+.+..+..-.++..|++.+..|..+..++..
T Consensus 163 ~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L---~~~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~e 231 (312)
T 1suu_A 163 EKVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKL---KEGDLFVKVLSVKENPYLLIVSENGYGKRLNMSK 231 (312)
T ss_dssp CEEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCC---CTTCCEEEEEECTTCSEEEEEETTSEEEEEEGGG
T ss_pred CEEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEe---CCCCEEEEEEEECCCCeEEEEECCCceEEEEHHH
Confidence 6788888899998888765332222 1222211 1124455655555667788999999999998743
No 343
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=93.13 E-value=3.3 Score=34.51 Aligned_cols=201 Identities=14% Similarity=0.093 Sum_probs=89.8
Q ss_pred eEEEEECCCCceeee-eec-cCcceeEeecCCCCCCEEEEEcC----CC-------ceEEEeCCCCCcee--ecCCC-Cc
Q 019006 123 TLRAWDVETGKQIKK-MAE-HNSFVNSCCPSRRGPPLVVSGSD----DG-------TAKLWDMRQRGAIQ--TFPDK-YQ 186 (347)
Q Consensus 123 ~i~iwd~~~~~~~~~-~~~-~~~~v~~~~~~~~~~~~~~s~~~----d~-------~i~iwd~~~~~~~~--~~~~~-~~ 186 (347)
.+..||..+.+-... +.. ....-.+++ ..+..+++.|+. ++ .+..||..+..-.. .++.. ..
T Consensus 25 ~~~~yd~~~~~W~~~~~~~~~~r~~~~~~--~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~ 102 (318)
T 2woz_A 25 AAVAYDPMENECYLTALAEQIPRNHSSIV--TQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCL 102 (318)
T ss_dssp EEEEEETTTTEEEEEEECTTSCSSEEEEE--CSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCS
T ss_pred ceEEECCCCCceecccCCccCCccceEEE--EECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccc
Confidence 378888877654321 111 111111222 223457777773 12 16678876654322 12221 11
Q ss_pred eEEEEEcCCCCeEEEEecC-------CcEEEEeCCCCceEEE--ecCCCCceeEEEECCCCCEEEEEcC------CCcEE
Q 019006 187 ITAVSFSDASDKIYTGGID-------NDVKVWDLRKGEVSMT--LQGHQDMITGMSLSPDGSYLLTNGM------DCKLC 251 (347)
Q Consensus 187 v~~~~~~~~~~~l~~~~~d-------g~i~iwd~~~~~~~~~--~~~~~~~i~~v~~~~~~~~l~t~~~------d~~i~ 251 (347)
...+.+ ++..++.|+.+ ..+.+||+.+.+-... +..... -.+++. .++..++.||. -..+.
T Consensus 103 ~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~-~~~~~~-~~~~iyv~GG~~~~~~~~~~~~ 178 (318)
T 2woz_A 103 FGLGEV--DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVY-GHNVIS-HNGMIYCLGGKTDDKKCTNRVF 178 (318)
T ss_dssp CEEEEE--TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEE-SCEEEE-ETTEEEEECCEESSSCBCCCEE
T ss_pred cceEEE--CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCccc-ccEEEE-ECCEEEEEcCCCCCCCccceEE
Confidence 222222 45566666653 2478889876642221 111000 012222 35566666653 23588
Q ss_pred EEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEEEEeeCC-----CeEEEEeCCCceee--EEecCCccCeeeE
Q 019006 252 IWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSD-----RMVYIWDTTSRRIL--YKLPGHTGSVNES 324 (347)
Q Consensus 252 ~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~d-----g~i~vwd~~~~~~~--~~~~~h~~~v~~~ 324 (347)
+||.... .. ..+..... ......++. -+++.++.|+.+ ..+.+||..+.+-. ..++..... ..
T Consensus 179 ~yd~~~~----~W-~~~~~~p~--~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~--~~ 248 (318)
T 2woz_A 179 IYNPKKG----DW-KDLAPMKT--PRSMFGVAI-HKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSS--IS 248 (318)
T ss_dssp EEETTTT----EE-EEECCCSS--CCBSCEEEE-ETTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBS--CE
T ss_pred EEcCCCC----EE-EECCCCCC--CcccceEEE-ECCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccc--eE
Confidence 8887632 11 11111111 111111111 256777777643 35778898776432 122211111 11
Q ss_pred EEcCCCCEEEEecCC
Q 019006 325 VFHATEPVIGSCSSD 339 (347)
Q Consensus 325 ~~~~~~~~l~s~s~D 339 (347)
+...++++++.+|.+
T Consensus 249 ~~~~~~~i~v~GG~~ 263 (318)
T 2woz_A 249 LVSLAGSLYAIGGFA 263 (318)
T ss_dssp EEEETTEEEEECCBC
T ss_pred EEEECCEEEEECCee
Confidence 222356777777764
No 344
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=93.08 E-value=0.47 Score=40.41 Aligned_cols=117 Identities=14% Similarity=0.082 Sum_probs=69.1
Q ss_pred CCeEEEEecCCcEEEEeCCCCceEEEecCC-CCceeEEEE--CCCCCEEEEE--cCCCcEEEEeCCCCCCcCceeEEEec
Q 019006 196 SDKIYTGGIDNDVKVWDLRKGEVSMTLQGH-QDMITGMSL--SPDGSYLLTN--GMDCKLCIWDMRPYAPQNRCVKILEG 270 (347)
Q Consensus 196 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-~~~i~~v~~--~~~~~~l~t~--~~d~~i~~wd~~~~~~~~~~~~~~~~ 270 (347)
+..++.++.||.|+-+|..+|+...+++.. ..++....- .+.+..++.+ ..||.|..+|.... .....+..
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G----~~~~~~~~ 85 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQG----LQKLPLSI 85 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTE----EEEEEEEH
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCC----cEEeeecc
Confidence 357889999999999999999988887653 112211110 0112233333 57999999987542 11111110
Q ss_pred cccccccceEE---EEE-C----CCCCEEEEeeCCCeEEEEeCCCceeeEEecC
Q 019006 271 HQHNFEKNLLK---CGW-S----PDGSKVTAGSSDRMVYIWDTTSRRILYKLPG 316 (347)
Q Consensus 271 ~~~~~~~~~~~---~~~-s----~~g~~l~sgs~dg~i~vwd~~~~~~~~~~~~ 316 (347)
.......++.. ... . ..+..+++|+.+|.++..|+.+|++++++..
T Consensus 86 ~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~ 139 (339)
T 2be1_A 86 RQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGP 139 (339)
T ss_dssp HHHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEEST
T ss_pred ccceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEec
Confidence 00000001110 000 0 1466889999999999999999999998763
No 345
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=92.69 E-value=3.8 Score=34.11 Aligned_cols=142 Identities=13% Similarity=0.226 Sum_probs=65.6
Q ss_pred cCCCCEEEEecC----CC-------eEEEEECCCCceee--eeeccCcceeEeecCCCCCCEEEEEcCC-------CceE
Q 019006 109 TTDGSQIISASP----DK-------TLRAWDVETGKQIK--KMAEHNSFVNSCCPSRRGPPLVVSGSDD-------GTAK 168 (347)
Q Consensus 109 ~~~~~~l~s~~~----dg-------~i~iwd~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~~~s~~~d-------~~i~ 168 (347)
..++..++.|+. ++ .+.+||..+.+-.. .+.... .-..++.. +..+++.|+.+ ..+.
T Consensus 54 ~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r-~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~ 130 (318)
T 2woz_A 54 TQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSAR-CLFGLGEV--DDKIYVVAGKDLQTEASLDSVL 130 (318)
T ss_dssp CSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCB-CSCEEEEE--TTEEEEEEEEBTTTCCEEEEEE
T ss_pred EECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccc-cccceEEE--CCEEEEEcCccCCCCcccceEE
Confidence 446677777773 12 16678877654321 111111 11111111 23466666643 2467
Q ss_pred EEeCCCCCceee--cCCC-CceEEEEEcCCCCeEEEEec------CCcEEEEeCCCCceEEE--ecCCCCceeEEEECCC
Q 019006 169 LWDMRQRGAIQT--FPDK-YQITAVSFSDASDKIYTGGI------DNDVKVWDLRKGEVSMT--LQGHQDMITGMSLSPD 237 (347)
Q Consensus 169 iwd~~~~~~~~~--~~~~-~~v~~~~~~~~~~~l~~~~~------dg~i~iwd~~~~~~~~~--~~~~~~~i~~v~~~~~ 237 (347)
+||..+..-... ++.. .....+. .++..++.|+. ...+.+||+.+.+-... +.... .-.+++. -+
T Consensus 131 ~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r-~~~~~~~-~~ 206 (318)
T 2woz_A 131 CYDPVAAKWSEVKNLPIKVYGHNVIS--HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPR-SMFGVAI-HK 206 (318)
T ss_dssp EEETTTTEEEEECCCSSCEESCEEEE--ETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCC-BSCEEEE-ET
T ss_pred EEeCCCCCEeECCCCCCcccccEEEE--ECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCc-ccceEEE-EC
Confidence 788876543222 2221 1112222 24555566653 24589999887642221 11111 1112222 24
Q ss_pred CCEEEEEcCC-----CcEEEEeCCC
Q 019006 238 GSYLLTNGMD-----CKLCIWDMRP 257 (347)
Q Consensus 238 ~~~l~t~~~d-----~~i~~wd~~~ 257 (347)
++.++.||.+ ..+.+||+..
T Consensus 207 ~~iyv~GG~~~~~~~~~~~~yd~~~ 231 (318)
T 2woz_A 207 GKIVIAGGVTEDGLSASVEAFDLKT 231 (318)
T ss_dssp TEEEEEEEEETTEEEEEEEEEETTT
T ss_pred CEEEEEcCcCCCCccceEEEEECCC
Confidence 5666666643 2466788753
No 346
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=92.37 E-value=4 Score=33.54 Aligned_cols=147 Identities=11% Similarity=0.133 Sum_probs=87.7
Q ss_pred CCEEEEEcCCCceEEEeCCCCC----ce--eecCCCCceEEEEEcCCCCeEEEEecCCcEEEEeCCC---------CceE
Q 019006 155 PPLVVSGSDDGTAKLWDMRQRG----AI--QTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRK---------GEVS 219 (347)
Q Consensus 155 ~~~~~s~~~d~~i~iwd~~~~~----~~--~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~---------~~~~ 219 (347)
...++..+.+|.++-..+..-. -. ..+.....+..+........++..+.+|.++.+.... |...
T Consensus 80 ~~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~lkegD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~ 159 (276)
T 3no0_A 80 GNRLLLATKKGYVKKIPLAEFEYKAQGMPIIKLTEGDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQG 159 (276)
T ss_dssp CSEEEEEETTSEEEEEEGGGTTTCSTTEECSCCCTTCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEEC
T ss_pred CCEEEEEeCCCEEEEEEHHHhhhhcCCeEEEecCCCCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEE
Confidence 3577888999999988754321 11 1233344566555555666888899999988886421 2222
Q ss_pred EEecCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCce---eEEEeccccccccceEEEEECCCCCEEEEeeC
Q 019006 220 MTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRC---VKILEGHQHNFEKNLLKCGWSPDGSKVTAGSS 296 (347)
Q Consensus 220 ~~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~ 296 (347)
..+.. .+.|..+...+++.+++..+..|.++...+..+....+- +..+.. .+.+..+....+...++..+.
T Consensus 160 i~L~~-~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i~~-----~~~lv~~~~~~~~~~i~~~t~ 233 (276)
T 3no0_A 160 IKLEK-NDETSGLRIWNGEPYLLVITAKGRVKKISHEEIPKTNRGVKGTEVSGT-----KDTLVDLIPIKEEVELLITTK 233 (276)
T ss_dssp CCCCT-TCCEEEEEEESSCSEEEEEETTSCEEEEEGGGSCCCCTTCCCEECCCS-----SSCEEEEEEESSEEEEEEEET
T ss_pred EccCC-CCEEEEEEEeCCCCEEEEEeCCCcEEEeEHHHcccCCCCCcceEEEcC-----CCcEEEEEEeCCCCEEEEEcC
Confidence 23332 245666655556678889999999999987665433321 222211 123444333334456777778
Q ss_pred CCeEEE--EeCCC
Q 019006 297 DRMVYI--WDTTS 307 (347)
Q Consensus 297 dg~i~v--wd~~~ 307 (347)
+|.+.. ++...
T Consensus 234 ~G~~ir~~~~~~~ 246 (276)
T 3no0_A 234 NGKAFYDKINQKD 246 (276)
T ss_dssp TSCEEEEEEEGGG
T ss_pred CCeEEEeeeCHHH
Confidence 888877 87543
No 347
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=92.32 E-value=7.6 Score=36.66 Aligned_cols=187 Identities=12% Similarity=0.173 Sum_probs=92.6
Q ss_pred CCCCeEEEeeCC----CcEEEEeccCCCeeeEEEe-C------c-ccceeEEEEcC-CCCEEEEecCCC------eEEEE
Q 019006 67 PAGTVIASGSHD----RDIFLWHVHGDCKNFMVLK-G------H-KNAILDLHWTT-DGSQIISASPDK------TLRAW 127 (347)
Q Consensus 67 ~~~~~l~s~~~d----~~v~~w~~~~~~~~~~~~~-~------h-~~~v~~~~~~~-~~~~l~s~~~dg------~i~iw 127 (347)
.++.+++.||.+ ..+.+||..... ...+. . . ...-.+++... ++..++.||.++ .+.+|
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~--W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~y 473 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDK--IDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIF 473 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSC--EEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEE
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCe--EEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEE
Confidence 456777778754 457788875331 22222 0 1 11112333333 666777776543 47788
Q ss_pred ECCCCceee--eeeccCcceeEeecCCCCCCEEEEEcCCC--ceEEEeCCCCCceee-----cC-CCCceEEEEEcCC-C
Q 019006 128 DVETGKQIK--KMAEHNSFVNSCCPSRRGPPLVVSGSDDG--TAKLWDMRQRGAIQT-----FP-DKYQITAVSFSDA-S 196 (347)
Q Consensus 128 d~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~~~s~~~d~--~i~iwd~~~~~~~~~-----~~-~~~~v~~~~~~~~-~ 196 (347)
|..+.+-.. .+.. ...-..++... ++.+++.|+.++ .+.+||..+..-... .+ ......++.+... +
T Consensus 474 d~~t~~W~~~~~~p~-~R~~h~~~~~~-~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~ 551 (695)
T 2zwa_A 474 DMKTREWSMIKSLSH-TRFRHSACSLP-DGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSK 551 (695)
T ss_dssp ETTTTEEEECCCCSB-CCBSCEEEECT-TSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTT
T ss_pred eCCCCcEEECCCCCC-CcccceEEEEc-CCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCC
Confidence 887754221 1111 11111222211 346777777554 688899876543221 11 1122333555544 4
Q ss_pred CeEEEEec--C-----CcEEEEeCCCCce-----EEEecC---CCCceeEEEECCCCCEEEEEcC--------CCcEEEE
Q 019006 197 DKIYTGGI--D-----NDVKVWDLRKGEV-----SMTLQG---HQDMITGMSLSPDGSYLLTNGM--------DCKLCIW 253 (347)
Q Consensus 197 ~~l~~~~~--d-----g~i~iwd~~~~~~-----~~~~~~---~~~~i~~v~~~~~~~~l~t~~~--------d~~i~~w 253 (347)
..++.|+. + +.+..||+.+..- -..+.. ....-.+++...++..++.||. ...+.+|
T Consensus 552 ~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~y 631 (695)
T 2zwa_A 552 QGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISL 631 (695)
T ss_dssp EEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEE
T ss_pred EEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEE
Confidence 56666765 2 3588999887651 111111 1111122333333666677764 2458888
Q ss_pred eCCC
Q 019006 254 DMRP 257 (347)
Q Consensus 254 d~~~ 257 (347)
|+..
T Consensus 632 d~~t 635 (695)
T 2zwa_A 632 DPLS 635 (695)
T ss_dssp ETTT
T ss_pred ECCC
Confidence 8763
No 348
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=92.24 E-value=7.8 Score=36.59 Aligned_cols=199 Identities=11% Similarity=0.131 Sum_probs=94.1
Q ss_pred CCCCEEEEecCC----CeEEEEECCCCceeeee-e------ccCcceeEeecCCCCCCEEEEEcCC------CceEEEeC
Q 019006 110 TDGSQIISASPD----KTLRAWDVETGKQIKKM-A------EHNSFVNSCCPSRRGPPLVVSGSDD------GTAKLWDM 172 (347)
Q Consensus 110 ~~~~~l~s~~~d----g~i~iwd~~~~~~~~~~-~------~~~~~v~~~~~~~~~~~~~~s~~~d------~~i~iwd~ 172 (347)
.++..++.||.+ ..+.+||..+.+-...- . .....-.+++....++.+++.|+.+ ..+.+||.
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 345566666643 35777887765432211 1 1111111222221033466666643 34778888
Q ss_pred CCCCcee--ecCCCCceEEEEEcCCCCeEEEEecCC--cEEEEeCCCCceEEE-----ecCCCCceeEEEECCC-CCEEE
Q 019006 173 RQRGAIQ--TFPDKYQITAVSFSDASDKIYTGGIDN--DVKVWDLRKGEVSMT-----LQGHQDMITGMSLSPD-GSYLL 242 (347)
Q Consensus 173 ~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~dg--~i~iwd~~~~~~~~~-----~~~~~~~i~~v~~~~~-~~~l~ 242 (347)
.+..-.. .++..-.-.+++.-.++..++.|+.++ .+.+||..+..-... +......-..+.+..+ +..++
T Consensus 476 ~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv 555 (695)
T 2zwa_A 476 KTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGII 555 (695)
T ss_dssp TTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEE
T ss_pred CCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEE
Confidence 7643222 122211112222223667777777654 699999887642211 1111111233555554 55666
Q ss_pred EEcC--C-----CcEEEEeCCCCCC--cCceeEEEeccccccccceEEEEECCCCCEEEEeeC--------CCeEEEEeC
Q 019006 243 TNGM--D-----CKLCIWDMRPYAP--QNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSS--------DRMVYIWDT 305 (347)
Q Consensus 243 t~~~--d-----~~i~~wd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~--------dg~i~vwd~ 305 (347)
.||. + +.+..||+....- .... ..+.... .....-..+....++.+++.|+. ...+.+||.
T Consensus 556 ~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W-~~~~~~p-~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~ 633 (695)
T 2zwa_A 556 LGGGFMDQTTVSDKAIIFKYDAENATEPITV-IKKLQHP-LFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDP 633 (695)
T ss_dssp ECCBCTTSSCBCCEEEEEEECTTCSSCCEEE-EEEEECG-GGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEET
T ss_pred ECCcCCCCCeeeCcEEEEEccCCccccceEE-EEcCCCC-CCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEEC
Confidence 6665 2 3588888875321 0001 1111110 01111112222333677777774 346999999
Q ss_pred CCcee
Q 019006 306 TSRRI 310 (347)
Q Consensus 306 ~~~~~ 310 (347)
.+.+-
T Consensus 634 ~t~~W 638 (695)
T 2zwa_A 634 LSETL 638 (695)
T ss_dssp TTTEE
T ss_pred CCCeE
Confidence 87654
No 349
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=91.83 E-value=9 Score=36.44 Aligned_cols=226 Identities=9% Similarity=0.117 Sum_probs=118.6
Q ss_pred ccEEEEEECCCCCeEEEeeCCCcEEEEeccCCCeeeEE-EeCcccceeEEEEcCCCCEEEEecCCCeEEEEECCCCceee
Q 019006 58 SAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMV-LKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIK 136 (347)
Q Consensus 58 ~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~-~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~ 136 (347)
..|.++....+|. |..|..+| +..||.... .+.. .......|.++.. .++ .|..+..+ -+..+|..+++. .
T Consensus 63 ~~i~~i~~d~~g~-lWigT~~G-l~~yd~~~~--~f~~~~~~~~~~i~~i~~-~~g-~lWigt~~-Gl~~~~~~~~~~-~ 134 (758)
T 3ott_A 63 TRIYCGVIIDNTY-LYMGTDNG-ILVYNYRAD--RYEQPETDFPTDVRTMAL-QGD-TLWLGALN-GLYTYQLQSRKL-T 134 (758)
T ss_dssp SCEEEEEEETTTE-EEEEETTE-EEEEETTTT--EECCCSCCCCSCEEEEEE-ETT-EEEEEETT-EEEEEETTTCCE-E
T ss_pred ceEEEEEEcCCCc-EEEEeCCC-eEEEeCCCC--EEECcccCCCceEEEEEe-cCC-cEEEEcCC-cceeEeCCCCeE-E
Confidence 4588877766664 44555555 678886432 1111 0111234666654 344 45555555 577788766543 2
Q ss_pred eeec-----cCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceee-cCC-----CCceEEEEEcCCCCeEEEEecC
Q 019006 137 KMAE-----HNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQT-FPD-----KYQITAVSFSDASDKIYTGGID 205 (347)
Q Consensus 137 ~~~~-----~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~-~~~-----~~~v~~~~~~~~~~~l~~~~~d 205 (347)
.+.. ....+.++.....+ . +..|+.+| +..+|..++..... .+. ...|.++..++++..+..|+.
T Consensus 135 ~~~~~~~~l~~~~i~~i~~d~~g-~-lWigt~~G-l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~- 210 (758)
T 3ott_A 135 SFDTRRNGLPNNTIYSIIRTKDN-Q-IYVGTYNG-LCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE- 210 (758)
T ss_dssp EECHHHHCCSCSCEEEEEECTTC-C-EEEEETTE-EEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-
T ss_pred EeccCCCCcCCCeEEEEEEcCCC-C-EEEEeCCC-HhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEEC-
Confidence 2211 12334444444333 3 34455544 66777765432211 111 124778877777777777775
Q ss_pred CcEEEEeCCCCceEEEecCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEeccc----cccccceEE
Q 019006 206 NDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQ----HNFEKNLLK 281 (347)
Q Consensus 206 g~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 281 (347)
+-+..+|..+++...........|.++....+|...+.. . +.+.++|..... ...+.... .-....|.+
T Consensus 211 ~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT-~-~Gl~~~~~~~~~-----~~~~~~~~~~~~~l~~~~i~~ 283 (758)
T 3ott_A 211 GYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLAGT-D-NGLYVYHNDTTP-----LQHIIHDSRNIQSLTNNIIWN 283 (758)
T ss_dssp EEEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEEEE-T-TEEEEECCTTSC-----CEEECCCTTCTTSCSCSCEEE
T ss_pred CCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEEEe-C-CceeEEecCCCc-----EEEEEcCCCCcCcCCcCeEEE
Confidence 458889987664322111123458888888777765544 3 457788765321 11111100 011235777
Q ss_pred EEECCCCCEEEEeeCCCeEEEEe
Q 019006 282 CGWSPDGSKVTAGSSDRMVYIWD 304 (347)
Q Consensus 282 ~~~s~~g~~l~sgs~dg~i~vwd 304 (347)
+....+|.+.+ |+..| +.++.
T Consensus 284 i~~D~~g~lWi-GT~~G-l~~~~ 304 (758)
T 3ott_A 284 IFADQEHNIWL-GTDYG-ISLSR 304 (758)
T ss_dssp EEECTTCCEEE-EESSS-EEEEC
T ss_pred EEEcCCCCEEE-EeCCc-ccccc
Confidence 77777776554 44456 55443
No 350
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=91.75 E-value=9.2 Score=36.38 Aligned_cols=261 Identities=10% Similarity=0.064 Sum_probs=134.2
Q ss_pred ccEEEEEECCCCCeEEEeeCCCcEEEEeccCCCeeeEEEe--Cc----ccceeEEEEcCCCCEEEEecCCCeEEEEECCC
Q 019006 58 SAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLK--GH----KNAILDLHWTTDGSQIISASPDKTLRAWDVET 131 (347)
Q Consensus 58 ~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~--~h----~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 131 (347)
..|.++....+|.+.+ |..+| +..++.... .+..+. .. ...|.++...+++..|..|.. +-+..+|..+
T Consensus 146 ~~i~~i~~d~~g~lWi-gt~~G-l~~~~~~~~--~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~ 220 (758)
T 3ott_A 146 NTIYSIIRTKDNQIYV-GTYNG-LCRYIPSNG--KFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPST 220 (758)
T ss_dssp SCEEEEEECTTCCEEE-EETTE-EEEEETTTT--EEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTT
T ss_pred CeEEEEEEcCCCCEEE-EeCCC-HhhCccCCC--ceEEecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCC
Confidence 4577887777777655 34444 666765432 122221 11 124788887777665444443 4577788776
Q ss_pred CceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeecC--------CCCceEEEEEcCCCCeEEEEe
Q 019006 132 GKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFP--------DKYQITAVSFSDASDKIYTGG 203 (347)
Q Consensus 132 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~--------~~~~v~~~~~~~~~~~l~~~~ 203 (347)
++...........+.++.....+ . +..|+.+ -+.+++..++....... ....|.++..+.++ .+..|+
T Consensus 221 ~~~~~~~~l~~~~i~~i~~d~~g-~-lWigT~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g-~lWiGT 296 (758)
T 3ott_A 221 GQIKQTEAFHNNSIKSLALDGNG-D-LLAGTDN-GLYVYHNDTTPLQHIIHDSRNIQSLTNNIIWNIFADQEH-NIWLGT 296 (758)
T ss_dssp TEEEEEEEEEEEEEEEEEECTTC-C-EEEEETT-EEEEECCTTSCCEEECCCTTCTTSCSCSCEEEEEECTTC-CEEEEE
T ss_pred CeEEeccCCCCCeEEEEEEcCCC-C-EEEEeCC-ceeEEecCCCcEEEEEcCCCCcCcCCcCeEEEEEEcCCC-CEEEEe
Confidence 54322111122345555544443 3 4445544 47778876544322111 12347888777655 466777
Q ss_pred cCCcEEEEeCCCCceEEEec-----CCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEecc---cccc
Q 019006 204 IDNDVKVWDLRKGEVSMTLQ-----GHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGH---QHNF 275 (347)
Q Consensus 204 ~dg~i~iwd~~~~~~~~~~~-----~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~---~~~~ 275 (347)
..| +.++.....-...... .....|.++.-..+|+.-+.. .+| +..++...... .....+... ....
T Consensus 297 ~~G-l~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~D~~g~lWiGt-~~G-l~~~~~~~~~~--~~~~~~~~~~~~~~l~ 371 (758)
T 3ott_A 297 DYG-ISLSRYNSALQFIPISQITGTGDGNQFYSLFRDSKGFYWFGG-ANG-LIRFTDPAGER--HDAIWYRMGDKTYPLS 371 (758)
T ss_dssp SSS-EEEECCCC-CEEEEHHHHSCSCCCCBEEEEEECTTCCEEEEE-TTE-EEEESCTTSSC--CCCEEECTTCSSSCCS
T ss_pred CCc-ccccccCCceeEEecccCCCCCCCceEEEEEEcCCCCEEEee-CCc-ceeeccccccc--ceeEEeccCCcCCCCC
Confidence 666 5555332111111110 112458888888777755543 444 66666442110 011111100 0011
Q ss_pred ccceEEEEECCCCCEEEEeeCCCeEEEEeCCCceeeEE-ecC-----CccCeeeEEEcCCCCEEE
Q 019006 276 EKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYK-LPG-----HTGSVNESVFHATEPVIG 334 (347)
Q Consensus 276 ~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~~~-~~~-----h~~~v~~~~~~~~~~~l~ 334 (347)
...|.++.-..+|.+.+ |+ ++-|..||..+++.... ... ....|.++...+++.+-+
T Consensus 372 ~~~v~~i~~d~~g~lWi-gt-~~GL~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWi 434 (758)
T 3ott_A 372 HNRIRHIYEDKEQQLWI-AT-DGSINRYDYATRQFIHYNIVDNTGTYNTNWTYYIFEDTAGQLWI 434 (758)
T ss_dssp CSCEEEEEECTTSCEEE-EE-TTEEEEEETTTTEEEEEEEECCC--CBSSSEEEEEECTTSEEEE
T ss_pred CCceEEEEECCCCCEEE-Ee-CCcHhhcCcCCCcEEEeecCCCcCCCCCceEEEEEEcCCCCEEE
Confidence 23577777777787655 44 35699999887765422 111 123577777777766544
No 351
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=91.41 E-value=5.2 Score=32.90 Aligned_cols=217 Identities=11% Similarity=0.082 Sum_probs=103.3
Q ss_pred ceeEEEEcCCCCEEEEecCCCeEEEEECCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceee-
Q 019006 102 AILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQT- 180 (347)
Q Consensus 102 ~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~- 180 (347)
.|..++-... +.+.-. ||.+..|-....-++..-......+..++.... ..++. . ||.+..|-......+..
T Consensus 25 ~i~~ia~G~~--h~~~l~-~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~~--hs~~l-~-~G~v~~wG~n~~Gqlg~P 97 (282)
T 3qhy_B 25 GVDAIAGGYF--HGLALK-GGKVLGWGANLNGQLTMPAATQSGVDAIAAGNY--HSLAL-K-DGEVIAWGGNEDGQTTVP 97 (282)
T ss_dssp SCCEEEECSS--EEEEEE-TTEEEEEECCSSSTTSCCGGGGSCCCEEEECSS--EEEEE-E-TTEEEEEECCTTSTTCCC
T ss_pred CCcEEEeCCC--eEEEEE-CCEEEEEeCCCCCCCCCCccCCCCEEEEEeCCC--EEEEE-E-CCEEEEeeCCCCCCCCCC
Confidence 5666665433 222224 899999975542221110011123333433222 22333 4 89999997543222111
Q ss_pred cCCCCceEEEEEcCCCCeEEEEecCCcEEEEeCCC-CceEEEecCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCC
Q 019006 181 FPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRK-GEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYA 259 (347)
Q Consensus 181 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~ 259 (347)
......|..++... .+.+.-. +|.|+.|-... ++.-.... ....|..++...+- .++ -. ||.+..|-.....
T Consensus 98 ~~~~~~v~~ia~G~--~hs~al~-~G~v~~wG~n~~gqlg~~~~-~~~~i~~i~~G~~~-~~~-l~-~G~v~~wG~n~~g 170 (282)
T 3qhy_B 98 AEARSGVDAIAAGA--WASYALK-DGKVIAWGDDSDGQTTVPAE-AQSGVTALDGGVYT-ALA-VK-NGGVIAWGDNYFG 170 (282)
T ss_dssp GGGSSSEEEEEEET--TEEEEEE-TTEEEEEECCTTSTTSCCGG-GGSSEEEEEECSSE-EEE-EE-TTEEEEEECCTTS
T ss_pred cccCCCeEEEECcC--CEEEEEe-CCeEEEecCCCCCcCCCCcc-CCCCeEEEEcccCE-EEE-EE-CCEEEEecCCCCC
Confidence 11123566666543 3444445 99999996543 22211111 12346666654332 222 23 7899999765432
Q ss_pred CcCceeEEEeccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCCceeeEEecCCccCeeeEEEcCCCCEEEEecCC
Q 019006 260 PQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSD 339 (347)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D 339 (347)
..... ......+..++...+.. ++. .||.|+.|-....-.+..-..-...|..++-...- .++-. |
T Consensus 171 qlg~p--------~~~~~~v~~i~~G~~hs-~al--~~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~h-~~al~--~ 236 (282)
T 3qhy_B 171 QTTVP--------AEAQSGVDDVAGGIFHS-LAL--KDGKVIAWGDNRYKQTTVPTEALSGVSAIASGEWY-SLALK--N 236 (282)
T ss_dssp TTSCC--------GGGGSSEEEEEECSSEE-EEE--ETTEEEEEECCTTSTTCCCGGGGSSCCEEEECSSC-EEEEE--T
T ss_pred CCCCc--------eecCCCeEEEEecCCEE-EEE--ECCeEEEEECCCCCCCCCCcccCCCceEEEcCCCE-EEEEE--C
Confidence 22111 11123455655444332 333 48999999654321111000112346666554443 33333 8
Q ss_pred CcEEeec
Q 019006 340 KQIYLGE 346 (347)
Q Consensus 340 ~~i~i~~ 346 (347)
|+|+.|-
T Consensus 237 g~v~~wG 243 (282)
T 3qhy_B 237 GKVIAWG 243 (282)
T ss_dssp TEEEEES
T ss_pred CEEEEec
Confidence 8888874
No 352
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=91.35 E-value=7.4 Score=34.55 Aligned_cols=62 Identities=13% Similarity=0.227 Sum_probs=38.7
Q ss_pred cccEEEEEECCCCCeEEEeeCCCcEEEEecc-CCCeeeEEEeC------cccceeEEEEcCC---CCEEEEe
Q 019006 57 QSAVYTMKFNPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKG------HKNAILDLHWTTD---GSQIISA 118 (347)
Q Consensus 57 ~~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~-~~~~~~~~~~~------h~~~v~~~~~~~~---~~~l~s~ 118 (347)
-...+.|+|.|+|+++++-...+.|++++.. +....+..+.. .......|+|+|+ +..|+.+
T Consensus 26 l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~ 97 (454)
T 1cru_A 26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYIS 97 (454)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEE
T ss_pred CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEE
Confidence 4467899999999988765544578888653 22222222221 2346779999995 5555444
No 353
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=90.40 E-value=6.5 Score=35.04 Aligned_cols=112 Identities=13% Similarity=0.075 Sum_probs=61.6
Q ss_pred ceeEEEECCCCC-EEEEEcCCCcEEEEeCCCCCCcCceeEEEecccc-----ccccceEEEEECCC----CCEEEEeeC-
Q 019006 228 MITGMSLSPDGS-YLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQH-----NFEKNLLKCGWSPD----GSKVTAGSS- 296 (347)
Q Consensus 228 ~i~~v~~~~~~~-~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~s~~----g~~l~sgs~- 296 (347)
..+.|+|.|++. .|+.+...|.|++++..... ....+..+..... ....-+..++|+|+ +.+.++-+.
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~-~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~ 93 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEGYVKILTPEGEI-FKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTN 93 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTTEEEEECTTSCB-CSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEEC
T ss_pred CceEEEECCCCCeEEEEEeCCceEEEEeCCCCe-eeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCC
Confidence 357899999985 45556778999999743210 1111111111000 11345788999996 333333221
Q ss_pred -C----------CeEEEEeCCC----------ceeeEEec--CCccCeeeEEEcCCCCEEEEecCCC
Q 019006 297 -D----------RMVYIWDTTS----------RRILYKLP--GHTGSVNESVFHATEPVIGSCSSDK 340 (347)
Q Consensus 297 -d----------g~i~vwd~~~----------~~~~~~~~--~h~~~v~~~~~~~~~~~l~s~s~D~ 340 (347)
+ ..|.-|.+.. .+.+..+. ...-.-..++|.|++.+.++.+..+
T Consensus 94 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~~ 160 (463)
T 2wg3_C 94 QERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDGM 160 (463)
T ss_dssp CCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCTT
T ss_pred CCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCCC
Confidence 1 1454455431 23444433 1112357899999999988887654
No 354
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=89.26 E-value=0.88 Score=41.32 Aligned_cols=75 Identities=20% Similarity=0.284 Sum_probs=50.2
Q ss_pred eeEEEECCCCCEEEEEcC-CCcEEEEeCCCCC---------CcCceeEEEeccccccccceEEEEECCCCCEEEEeeCCC
Q 019006 229 ITGMSLSPDGSYLLTNGM-DCKLCIWDMRPYA---------PQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDR 298 (347)
Q Consensus 229 i~~v~~~~~~~~l~t~~~-d~~i~~wd~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg 298 (347)
...+.++|||++++.++. +.++.++|++... +........+ .--..+-.+|.++|.-..+---|.
T Consensus 325 PHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-----~GlGPlHt~Fd~~G~aYTtlfidS 399 (638)
T 3sbq_A 325 PHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-----LGLGPLHTTFDGRGNAYTTLFIDS 399 (638)
T ss_dssp CCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-----CCSCEEEEEECSSSEEEEEETTTT
T ss_pred CcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-----CCCcccEEEECCCCceEeeeeecc
Confidence 467889999999988774 6799999987421 1111111111 112356788999995555666899
Q ss_pred eEEEEeCCCc
Q 019006 299 MVYIWDTTSR 308 (347)
Q Consensus 299 ~i~vwd~~~~ 308 (347)
.|.-|++...
T Consensus 400 qvvkWni~~a 409 (638)
T 3sbq_A 400 QVVKWNMEEA 409 (638)
T ss_dssp EEEEEEHHHH
T ss_pred eEEEEeccHH
Confidence 9999998653
No 355
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=88.71 E-value=10 Score=32.03 Aligned_cols=156 Identities=9% Similarity=0.037 Sum_probs=87.1
Q ss_pred cceeEEEEcC---CCCEEEEecCCCeEEEEECCCCce-------eeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEE
Q 019006 101 NAILDLHWTT---DGSQIISASPDKTLRAWDVETGKQ-------IKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLW 170 (347)
Q Consensus 101 ~~v~~~~~~~---~~~~l~s~~~dg~i~iwd~~~~~~-------~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iw 170 (347)
..|.++...+ +..+++.++.+|.++.-.+..... .-.+.. ...+..+...... ..++..+..|.+..+
T Consensus 95 e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~-d~ill~T~~G~~~rf 172 (327)
T 3uc1_A 95 ERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAG-DDLLLVSANGQSIRF 172 (327)
T ss_dssp CCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTT-CEEEEEETTSEEEEE
T ss_pred CEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCC-CEEEEEECCCeEEEE
Confidence 4565554333 567999999999999987654221 112222 2333333322233 346667788888777
Q ss_pred eCC--CCC---------ceeecCCCCceEEEEEcCCCCeEEEEecCCcEEEEeCCCC-------ceE--EEecCCCCcee
Q 019006 171 DMR--QRG---------AIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKG-------EVS--MTLQGHQDMIT 230 (347)
Q Consensus 171 d~~--~~~---------~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-------~~~--~~~~~~~~~i~ 230 (347)
... .-. ....+.....|.++..-+.+..++..+..|.++.-.+... +-. ..+..-.+.+.
T Consensus 173 ~~~~~eip~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~~~l~~~~d~lv 252 (327)
T 3uc1_A 173 SATDEALRPMGRATSGVQGMRFNIDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTVMYDRRRGRLV 252 (327)
T ss_dssp ECCTTTSCCCCTTSBCEESSCCCTTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEESSCCCTTTCSEE
T ss_pred ECcccccCcCCcCCCCeeeecCCCCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCCCcEEEEEecCCCCeEE
Confidence 655 211 1112333456776666666678999999999888765321 112 22222123344
Q ss_pred EEEECCCCCEEEEEcCCCcEEEEeCCCC
Q 019006 231 GMSLSPDGSYLLTNGMDCKLCIWDMRPY 258 (347)
Q Consensus 231 ~v~~~~~~~~l~t~~~d~~i~~wd~~~~ 258 (347)
.+....+...++..+.+|.+..++....
T Consensus 253 ~~~~~~~~~~i~l~T~~G~~ir~~~~~i 280 (327)
T 3uc1_A 253 GALIVDDDSELYAVTSGGGVIRTAARQV 280 (327)
T ss_dssp EEEEECTTCEEEEEEGGGCEEEEEGGGS
T ss_pred EEEEeCCCccEEEEcCCCeEEEEehhhc
Confidence 4443334456666677777777766543
No 356
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=84.06 E-value=17 Score=30.15 Aligned_cols=173 Identities=12% Similarity=0.115 Sum_probs=89.2
Q ss_pred ECCCCCeEEEeeCC--------------CcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEec----CCCeEEE
Q 019006 65 FNPAGTVIASGSHD--------------RDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISAS----PDKTLRA 126 (347)
Q Consensus 65 ~~~~~~~l~s~~~d--------------~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~----~dg~i~i 126 (347)
++++|..|.-.... ..|+..++.+... ..+... ....|++++++|+-.. .+..|..
T Consensus 60 i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~--~~l~~~----~~~~~s~~g~~Iy~~~~~~~~~~~Iy~ 133 (302)
T 3s25_A 60 INADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGS--TVLDPD----PCIYASLIGNYIYYLHYDTQTATSLYR 133 (302)
T ss_dssp EEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCC--EEEECS----CEEEEEEETTEEEEEEESSSSCEEEEE
T ss_pred EEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcc--eEeecC----CccEEEEeCCEEEEEeecCCCCceEEE
Confidence 46777766554432 3466666654422 222221 1235777888888665 3345555
Q ss_pred EECCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeecCCCCceEEEEEcCCCCeEEEEecC-
Q 019006 127 WDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIYTGGID- 205 (347)
Q Consensus 127 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d- 205 (347)
.+++. .....+..+.. ..+.+.+..+..+.....+|...++..+.....+.. ... ..+.|+++.|+-....
T Consensus 134 ~~~dG-s~~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~~--~~~-~~~~P~g~~iy~t~~~~ 205 (302)
T 3s25_A 134 IRIDG-EEKKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYDC--NCY-KPVVLDDTNVYYMDVNR 205 (302)
T ss_dssp EETTS-CCCEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEECS--CEE-EEEEEETTEEEEEEGGG
T ss_pred EECCC-CCeEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeCC--Ccc-ceeeecCCEEEEEEcCC
Confidence 56653 33334433322 122344455555554467777777765443333332 122 2355888887765433
Q ss_pred -CcEEEEeCCCCceEEEecCCCCceeEEEECCCCCEEEEEc--CCCcEEEEeCC
Q 019006 206 -NDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNG--MDCKLCIWDMR 256 (347)
Q Consensus 206 -g~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~--~d~~i~~wd~~ 256 (347)
..|..-++.... ...+.. ..+ ..|+|++.+|.-+. ..+.|..-++.
T Consensus 206 ~~~I~~~~ldG~~-~~~Lt~--~~~--~~~~~~g~~Iy~~~~~~~~~i~~~~~D 254 (302)
T 3s25_A 206 DNAIVHVNINNPN-PVVLTE--ANI--EHYNVYGSLIFYQRGGDNPALCVVKND 254 (302)
T ss_dssp TTEEEEECSSSCC-CEECSC--SCE--EEEEEETTEEEEEECSSSCEEEEEETT
T ss_pred CcEEEEEECCCCC-eEEEeC--CCc--ceEEECCCEEEEEECCCCcEEEEEECC
Confidence 357666776544 233321 223 34777888777542 23455555543
No 357
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=83.79 E-value=17 Score=29.79 Aligned_cols=120 Identities=12% Similarity=0.075 Sum_probs=71.9
Q ss_pred CCceEEEEEcC-CCCeEEEEecCCcEEEEeCCC------CceEEEecCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCC
Q 019006 184 KYQITAVSFSD-ASDKIYTGGIDNDVKVWDLRK------GEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMR 256 (347)
Q Consensus 184 ~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~------~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~ 256 (347)
...+..+.... +...++..+.+|.++-..+.. +.....+.. .+.+..+....+...++..+..|.+..++..
T Consensus 67 ~e~i~~v~~~~~~~~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~lke-gD~l~~~~~~~~~~~ill~T~~G~~~r~~~~ 145 (276)
T 3no0_A 67 EEKIVGAFIREKFGNRLLLATKKGYVKKIPLAEFEYKAQGMPIIKLTE-GDEVVSIASSVDETHILLFTKKGRVARFSVR 145 (276)
T ss_dssp TCCEEEEEEGGGSCSEEEEEETTSEEEEEEGGGTTTCSTTEECSCCCT-TCCEEEEEECCSSCEEEEEETTSEEEEEEGG
T ss_pred CCEEEEEECCcCCCCEEEEEeCCCEEEEEEHHHhhhhcCCeEEEecCC-CCEEEEEEEeCCCCEEEEEECCCEEEEEEhh
Confidence 34454443321 456888999999999887543 222233333 3456666666566688888889998888765
Q ss_pred CCCCcCc---eeEEEeccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCC
Q 019006 257 PYAPQNR---CVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTS 307 (347)
Q Consensus 257 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~ 307 (347)
......+ -+..++ ..-.+.+..+...+++..|+..+..|.++...+..
T Consensus 146 eip~~gR~a~Gv~~i~---L~~~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~e 196 (276)
T 3no0_A 146 EVPPSTPGARGVQGIK---LEKNDETSGLRIWNGEPYLLVITAKGRVKKISHEE 196 (276)
T ss_dssp GSCBCCTTCCCEECCC---CCTTCCEEEEEEESSCSEEEEEETTSCEEEEEGGG
T ss_pred hCCCcCCCCCCEEEEc---cCCCCEEEEEEEeCCCCEEEEEeCCCcEEEeEHHH
Confidence 4322211 111111 11124455554445677899999999999887643
No 358
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=81.48 E-value=25 Score=30.19 Aligned_cols=137 Identities=10% Similarity=0.015 Sum_probs=63.5
Q ss_pred ceEEEEEcCC-CCeEEEEecCCcEEEEeCCCCceEEEecC--CC---CceeEEEECCC-CCEEEEEcC-----------C
Q 019006 186 QITAVSFSDA-SDKIYTGGIDNDVKVWDLRKGEVSMTLQG--HQ---DMITGMSLSPD-GSYLLTNGM-----------D 247 (347)
Q Consensus 186 ~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~--~~---~~i~~v~~~~~-~~~l~t~~~-----------d 247 (347)
.+.++.++|. ...++++...+ |+..+- .++.-..+.. .. ..+..+.++|. ...+..+.. +
T Consensus 233 ~~~~i~~~~~~~~~l~vg~~~g-l~~s~D-~G~tW~~~~~~l~~~~~~~~~~i~~~p~~~~~l~~~t~~~~~~w~~~~~~ 310 (394)
T 3b7f_A 233 DPHCVVQHPAAPDILYQQNHCG-IYRMDR-REGVWKRIGDAMPREVGDIGFPIVVHQRDPRTVWVFPMDGSDVWPRVSPG 310 (394)
T ss_dssp CEEEEEECSSSTTEEEEEETTE-EEEEET-TTTEEECGGGGSCTTTCSCEEEEEECSSCTTCEEEEECBCCSSTTCCBCC
T ss_pred ceeEEEECCCCCCEEEEEcCCe-EEEeCC-CCCcceECCCCCCCCCccceEEEEECCCCCCEEEEEeccCCccceeecCC
Confidence 4788899886 35677766544 544432 2332222211 11 23567888763 333444321 2
Q ss_pred CcEEEEeCCCCCCcCceeEEEecccc--cccc-ceEEEEECCC-CCEEEEeeCCCeEEEEeCCCceeeEEecCCccCeee
Q 019006 248 CKLCIWDMRPYAPQNRCVKILEGHQH--NFEK-NLLKCGWSPD-GSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNE 323 (347)
Q Consensus 248 ~~i~~wd~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~s~~-g~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~v~~ 323 (347)
+...+|...+...... ....+... .+.. ....++++|. ...|+.++.++.|+.-+ +.++.-..+..+-..+.+
T Consensus 311 ~~~~~~~S~DgG~tW~--~~~~glp~~~~~~~~~~~~~~~~p~~~~~l~~g~~~g~l~~S~-D~G~tW~~~~~~lp~~~~ 387 (394)
T 3b7f_A 311 GKPAVYVTRDAGESWQ--RQDRGLPTDQAWLTVKRQAMTADAHAPVGVYFGTTGGEIWASA-DEGEHWQCIASHLPHIYA 387 (394)
T ss_dssp SSCCEEEESSTTSCCE--EECBTSCCSSCCCCCCTBSEEECCSSSCCEEEECTTSCEEEES-STTSBCEEEECSCSCEEE
T ss_pred CceeEEEECCCCCCce--ECCCCCCCccccceEEEEEEEECCCCCCEEEEEeCCCeEEEEC-CCCCCceEcccCCCCeeE
Confidence 3345565443221111 11111110 0000 0124567774 34566676666665442 334434444444456777
Q ss_pred EEEc
Q 019006 324 SVFH 327 (347)
Q Consensus 324 ~~~~ 327 (347)
++|.
T Consensus 388 v~~~ 391 (394)
T 3b7f_A 388 VQSA 391 (394)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 7765
No 359
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=78.13 E-value=12 Score=34.07 Aligned_cols=69 Identities=16% Similarity=0.219 Sum_probs=48.8
Q ss_pred EeecCCCCCCEEEEEcCCCceEEEeCCCC------Cc-------eeecCCCCceEEEEEcCCCCeEEEEecCCcEEEEeC
Q 019006 147 SCCPSRRGPPLVVSGSDDGTAKLWDMRQR------GA-------IQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDL 213 (347)
Q Consensus 147 ~~~~~~~~~~~~~s~~~d~~i~iwd~~~~------~~-------~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~ 213 (347)
.+...|++..++++|--+.++.++|++.- +. ....+........+|+++|....+-.-|..|..|++
T Consensus 327 Gv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G~aYTtlfidSqvvkWni 406 (638)
T 3sbq_A 327 GCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRGNAYTTLFIDSQVVKWNM 406 (638)
T ss_dssp CEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTTTEEEEEEH
T ss_pred ceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCCceEeeeeecceEEEEec
Confidence 35567778778888889999999998631 11 112233445778899998854455668999999998
Q ss_pred CC
Q 019006 214 RK 215 (347)
Q Consensus 214 ~~ 215 (347)
..
T Consensus 407 ~~ 408 (638)
T 3sbq_A 407 EE 408 (638)
T ss_dssp HH
T ss_pred cH
Confidence 64
No 360
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=75.47 E-value=19 Score=35.44 Aligned_cols=37 Identities=16% Similarity=0.320 Sum_probs=31.8
Q ss_pred ceeEEEEcCCCCEEEEecCCCeEEEEECCCCceeeee
Q 019006 102 AILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKM 138 (347)
Q Consensus 102 ~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 138 (347)
.+.+++..++..++++-+.|+++|+|++.+++++.+.
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 4677778888889999999999999999999877654
No 361
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=70.99 E-value=49 Score=28.28 Aligned_cols=62 Identities=11% Similarity=0.037 Sum_probs=33.8
Q ss_pred ceEEEEEcCC-CCeEEEEecCCcEEEEeCCCCceEEEecC-----C--------CCceeEEEECCC-CCEEEEEcCCC
Q 019006 186 QITAVSFSDA-SDKIYTGGIDNDVKVWDLRKGEVSMTLQG-----H--------QDMITGMSLSPD-GSYLLTNGMDC 248 (347)
Q Consensus 186 ~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-----~--------~~~i~~v~~~~~-~~~l~t~~~d~ 248 (347)
.+.++.++|. ...++.+..++.|+..+- .++.-..+.. + ...+.+|.++|. ...|..+...+
T Consensus 178 ~i~~i~~d~~~~~~l~vg~~~ggl~~s~D-gG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g 254 (394)
T 3b7f_A 178 KMHSILVDPRDPKHLYIGMSSGGVFESTD-AGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG 254 (394)
T ss_dssp EEEEEEECTTCTTCEEEEEETBEEEEESS-TTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE
T ss_pred ceeEEEECCCCCCEEEEEECCCCEEEECC-CCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe
Confidence 5778889874 456676665555554432 2222111110 0 124788999986 35666665444
No 362
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=70.22 E-value=16 Score=36.72 Aligned_cols=37 Identities=16% Similarity=0.320 Sum_probs=30.9
Q ss_pred ceeEEEEcCCCCEEEEecCCCeEEEEECCCCceeeee
Q 019006 102 AILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKM 138 (347)
Q Consensus 102 ~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 138 (347)
.+.+++..++..++++-+.|+++|+|++.+++++.+.
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~ 275 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 275 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEee
Confidence 4556667778889999999999999999999887654
No 363
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=69.71 E-value=47 Score=27.54 Aligned_cols=235 Identities=13% Similarity=0.104 Sum_probs=119.3
Q ss_pred CCCeEEEeeCCCcEEEEeccCC--------CeeeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEECCC--------
Q 019006 68 AGTVIASGSHDRDIFLWHVHGD--------CKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVET-------- 131 (347)
Q Consensus 68 ~~~~l~s~~~d~~v~~w~~~~~--------~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~-------- 131 (347)
+...+++.+.+|-|+--.+..- ......++. .+.+..+......+.|+..+..|.+.-.....
T Consensus 2 ~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~ke-~D~l~~~~~~~~~~~ll~fT~~G~~~~~~~~elp~~~~~a 80 (307)
T 1zi0_A 2 QEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKE-EDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGA 80 (307)
T ss_dssp CCEEEEEEETTSEEEEEECC---------------------CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCCCCSSS
T ss_pred CCcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeCC-CCEEEEEEEECCCCEEEEEECCCEEEEEEhhHCcCCCCCC
Confidence 4556777778887765544210 000001112 23344443444455666677778766554421
Q ss_pred -Cceee---eeeccCcceeEeecCC--CCCCEEEEEcCCCceEEEeCCC-----CCcee--ecCCCCceEEEEEcCCCCe
Q 019006 132 -GKQIK---KMAEHNSFVNSCCPSR--RGPPLVVSGSDDGTAKLWDMRQ-----RGAIQ--TFPDKYQITAVSFSDASDK 198 (347)
Q Consensus 132 -~~~~~---~~~~~~~~v~~~~~~~--~~~~~~~s~~~d~~i~iwd~~~-----~~~~~--~~~~~~~v~~~~~~~~~~~ 198 (347)
|..+. .+. ....+..+.... .....++..+..|.++--.+.. +.-+. .+.....+..+........
T Consensus 81 ~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~d~lv~~~~~~~~~~ 159 (307)
T 1zi0_A 81 RGRPIVNLLPLE-QDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDGDELIGVDLTSGEDE 159 (307)
T ss_dssp CCEEGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTTCCEEEEEEECTTCE
T ss_pred CCeEhhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCCCEEEEEEEeCCCCE
Confidence 12111 111 222343333321 2334677789999999886531 11111 2223345555544445567
Q ss_pred EEEEecCCcEEEEeCCC---------CceEEEecCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCce---eE
Q 019006 199 IYTGGIDNDVKVWDLRK---------GEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRC---VK 266 (347)
Q Consensus 199 l~~~~~dg~i~iwd~~~---------~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~---~~ 266 (347)
++..+.+|.+..++... |.....+.. .+.|.++..-.++..+++.+..|..+-.++..+....+- +.
T Consensus 160 i~l~T~~G~~irf~~~~v~~~gr~a~Gv~~i~L~~-~d~Vv~~~~~~~~~~ll~~T~~G~~Kr~~~~e~~~~~Rg~kG~~ 238 (307)
T 1zi0_A 160 VMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGE-GDKVVSLIVPRGDGAILTATQNGYGKRTAVAEYPTKSRATKGVI 238 (307)
T ss_dssp EEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCT-TCCEEEEECCCSSCEEEEEETTSEEEEECGGGSCCCCTTSCCEE
T ss_pred EEEECCCCcEEEEEHHHcCccCCCCCCeEeEEeCC-CCEEEEEEEecCCCEEEEEEcCCceEEEEHHHhccCCCCCCCEE
Confidence 88888999888876531 112223332 345666665555667888899999999888655433221 11
Q ss_pred EEeccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCC
Q 019006 267 ILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTS 307 (347)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~ 307 (347)
.++-. .-.+.+..+....+...|+.-+.+|.+..++...
T Consensus 239 ~~~~~--~~~~~lv~~~~v~~~~~l~~~t~~g~~ir~~~~~ 277 (307)
T 1zi0_A 239 SIKVT--ERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSE 277 (307)
T ss_dssp SSCCC--TTTCSEEEEEEECTTCEEEEEESSCCEEEEEGGG
T ss_pred eeEec--CCCCeEEEEEEeCCCceEEEEcCCCcEEEEeccc
Confidence 11111 0113344433323445566677777777776544
No 364
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=67.62 E-value=52 Score=27.31 Aligned_cols=189 Identities=11% Similarity=0.090 Sum_probs=105.6
Q ss_pred CCCCeEEEeeCCCcEEEEeccCCC------eee--EEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEECCCC------
Q 019006 67 PAGTVIASGSHDRDIFLWHVHGDC------KNF--MVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETG------ 132 (347)
Q Consensus 67 ~~~~~l~s~~~d~~v~~w~~~~~~------~~~--~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~------ 132 (347)
++...+++.+.+|-|+--.+..-. .-. ..++. .+.+..+......+.++..+..|.++-.....-
T Consensus 6 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke-~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~ 84 (312)
T 1suu_A 6 QKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLND-GDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRA 84 (312)
T ss_dssp --CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCT-TCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC----
T ss_pred CCCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCC-CCEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCcc
Confidence 456678888888888876553110 001 11122 234445444445567777788888777655321
Q ss_pred ---cee---eeeeccCcceeEeecCC--CCCCEEEEEcCCCceEEEeCCC-------CCceeecCCCCceEEEEEcCCCC
Q 019006 133 ---KQI---KKMAEHNSFVNSCCPSR--RGPPLVVSGSDDGTAKLWDMRQ-------RGAIQTFPDKYQITAVSFSDASD 197 (347)
Q Consensus 133 ---~~~---~~~~~~~~~v~~~~~~~--~~~~~~~s~~~d~~i~iwd~~~-------~~~~~~~~~~~~v~~~~~~~~~~ 197 (347)
..+ -.+.. ...+..+.... .....++..+..|.++...+.. +.....+.....+..+.......
T Consensus 85 ~~G~~i~~~l~l~~-~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~~d~lv~~~~~~~~~ 163 (312)
T 1suu_A 85 SKGQNISELINLGD-QEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLNDKDFVTSAEIVFKDE 163 (312)
T ss_dssp ---CBGGGTSCCCT-TCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCTTCCEEEEEEECTTC
T ss_pred CCCcChhhccCCCC-CCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCCCCEEEEEEEeCCCC
Confidence 110 01111 12233332222 1234567778999998877632 11122233345565555555566
Q ss_pred eEEEEecCCcEEEEeCCC---------CceEEEecCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCC
Q 019006 198 KIYTGGIDNDVKVWDLRK---------GEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPY 258 (347)
Q Consensus 198 ~l~~~~~dg~i~iwd~~~---------~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~ 258 (347)
.++..+.+|.+..+.... |.....+.. .+.|.++..-.++..+++.+..|..+..++..+
T Consensus 164 ~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~-~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~e~ 232 (312)
T 1suu_A 164 KVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKE-GDLFVKVLSVKENPYLLIVSENGYGKRLNMSKI 232 (312)
T ss_dssp EEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCT-TCCEEEEEECTTCSEEEEEETTSEEEEEEGGGS
T ss_pred EEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeCC-CCEEEEEEEECCCCeEEEEECCCceEEEEHHHh
Confidence 788899999988887532 222233433 345666655555677888899999999988654
No 365
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=67.09 E-value=23 Score=32.62 Aligned_cols=58 Identities=14% Similarity=0.067 Sum_probs=42.6
Q ss_pred eEEEEECCCCCEEEEeeCC------------CeEEEEeCCCceeeEEecCC-ccCeeeEEEcCCCCEEEEe
Q 019006 279 LLKCGWSPDGSKVTAGSSD------------RMVYIWDTTSRRILYKLPGH-TGSVNESVFHATEPVIGSC 336 (347)
Q Consensus 279 ~~~~~~s~~g~~l~sgs~d------------g~i~vwd~~~~~~~~~~~~h-~~~v~~~~~~~~~~~l~s~ 336 (347)
.--+.|+|+|.++++-..+ ..+.+.+..++++...+.++ ..+++.++|+|+++.|...
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 4567899999987765432 35667787888877666665 4689999999999876543
No 366
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=67.08 E-value=50 Score=26.89 Aligned_cols=204 Identities=14% Similarity=0.113 Sum_probs=96.4
Q ss_pred CCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEECCCCceeeeeeccCcceeEeecCCCCCCE
Q 019006 78 DRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPL 157 (347)
Q Consensus 78 d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 157 (347)
||.|+.|-.....+.-.. ......|..++-..+.. ++. . ||.|..|-....-++..-..-...+..++... ..
T Consensus 41 ~G~v~~wG~n~~Gqlg~p-~~~~~~i~~ia~G~~hs-~~l-~-~G~v~~wG~n~~Gqlg~P~~~~~~v~~ia~G~---~h 113 (282)
T 3qhy_B 41 GGKVLGWGANLNGQLTMP-AATQSGVDAIAAGNYHS-LAL-K-DGEVIAWGGNEDGQTTVPAEARSGVDAIAAGA---WA 113 (282)
T ss_dssp TTEEEEEECCSSSTTSCC-GGGGSCCCEEEECSSEE-EEE-E-TTEEEEEECCTTSTTCCCGGGSSSEEEEEEET---TE
T ss_pred CCEEEEEeCCCCCCCCCC-ccCCCCEEEEEeCCCEE-EEE-E-CCEEEEeeCCCCCCCCCCcccCCCeEEEECcC---CE
Confidence 788888854321111000 01123566666554322 333 4 89999997554221110000112343443322 23
Q ss_pred EEEEcCCCceEEEeCCCCCce-eecCCCCceEEEEEcCCCCeEEEEecCCcEEEEeCCC-CceEEEecCCCCceeEEEEC
Q 019006 158 VVSGSDDGTAKLWDMRQRGAI-QTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRK-GEVSMTLQGHQDMITGMSLS 235 (347)
Q Consensus 158 ~~s~~~d~~i~iwd~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~i~~v~~~ 235 (347)
.+.-. ||.+..|-......+ ........+..++.... +.+.-. ||.|+.|-... ++.-.... -...|..++..
T Consensus 114 s~al~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~--~~~~l~-~G~v~~wG~n~~gqlg~p~~-~~~~v~~i~~G 188 (282)
T 3qhy_B 114 SYALK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVY--TALAVK-NGGVIAWGDNYFGQTTVPAE-AQSGVDDVAGG 188 (282)
T ss_dssp EEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSS--EEEEEE-TTEEEEEECCTTSTTSCCGG-GGSSEEEEEEC
T ss_pred EEEEe-CCeEEEecCCCCCcCCCCccCCCCeEEEEcccC--EEEEEE-CCEEEEecCCCCCCCCCcee-cCCCeEEEEec
Confidence 33345 899999975532221 11112234666655432 333333 79999996543 22111111 12457777664
Q ss_pred CCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCC
Q 019006 236 PDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTS 307 (347)
Q Consensus 236 ~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~ 307 (347)
.+ ..++. .||.+..|-........... .....+..++-......+++ ||.|+.|-...
T Consensus 189 ~~-hs~al--~~G~v~~wG~n~~gqlg~p~--------~~~~~v~~i~~G~~h~~al~---~g~v~~wG~n~ 246 (282)
T 3qhy_B 189 IF-HSLAL--KDGKVIAWGDNRYKQTTVPT--------EALSGVSAIASGEWYSLALK---NGKVIAWGSSR 246 (282)
T ss_dssp SS-EEEEE--ETTEEEEEECCTTSTTCCCG--------GGGSSCCEEEECSSCEEEEE---TTEEEEESTTC
T ss_pred CC-EEEEE--ECCeEEEEECCCCCCCCCCc--------ccCCCceEEEcCCCEEEEEE---CCEEEEecCCC
Confidence 33 23333 58999999755432221111 11123445544443333333 89999996544
No 367
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=65.00 E-value=75 Score=28.16 Aligned_cols=54 Identities=9% Similarity=0.212 Sum_probs=35.6
Q ss_pred ccEEEEEECCCCC-eEEEeeCCCcEEEEeccCCC--eeeEEEe---------CcccceeEEEEcCC
Q 019006 58 SAVYTMKFNPAGT-VIASGSHDRDIFLWHVHGDC--KNFMVLK---------GHKNAILDLHWTTD 111 (347)
Q Consensus 58 ~~V~~v~~~~~~~-~l~s~~~d~~v~~w~~~~~~--~~~~~~~---------~h~~~v~~~~~~~~ 111 (347)
...+.|+|.|+|. .|+++...|.|++++..+.. ..+..+. ........|+|+|+
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~ 79 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPN 79 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTT
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCC
Confidence 4567999999996 45566788999999754321 1222221 11356789999996
No 368
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=64.78 E-value=11 Score=37.15 Aligned_cols=37 Identities=8% Similarity=0.069 Sum_probs=32.2
Q ss_pred ceEEEEECCCCCEEEEeeCCCeEEEEeCCCceeeEEe
Q 019006 278 NLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKL 314 (347)
Q Consensus 278 ~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~~~~ 314 (347)
.+.+++..++..++++-+.|+++|+|++.+++++...
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 4667778889999999999999999999999887754
No 369
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=62.38 E-value=59 Score=26.09 Aligned_cols=77 Identities=9% Similarity=0.087 Sum_probs=49.3
Q ss_pred CCceEEEEEcCCCCeEEEEecCCcEEEEeCC-------CCceEEEecCCCCceeEEEEC-CCCCEEEEEcCCCcEEEEeC
Q 019006 184 KYQITAVSFSDASDKIYTGGIDNDVKVWDLR-------KGEVSMTLQGHQDMITGMSLS-PDGSYLLTNGMDCKLCIWDM 255 (347)
Q Consensus 184 ~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~-------~~~~~~~~~~~~~~i~~v~~~-~~~~~l~t~~~d~~i~~wd~ 255 (347)
...|..+....++.+++.++..|.++...+. .+.....+.. .+.+..+... ..+..++..+.+|.+..++.
T Consensus 83 ~e~Iv~~~~~~~~~~lll~T~~G~~Kr~~~~e~~~~~r~G~~~i~L~~-~d~lv~~~~~~~~~~~i~l~T~~G~~lrf~~ 161 (256)
T 1zvt_A 83 GATVDHMLMESDDQKLLMASDAGYGFVCTFNDLVARNRAGKALITLPE-NAHVMPPVVIEDASDMLLAITQAGRMLMFPV 161 (256)
T ss_dssp TCCEEEEECCCTTCEEEEEBTTSEEEEEEGGGGCCCSTTCEECBCCCT-TCCBCCCEECCCTTCEEEEEETTSEEEEEEG
T ss_pred CCEEEEEEEeCCCCEEEEEeCCCeEEEeEHHHhcccCcCceEEEEECC-CCEEEEEEEecCCCCEEEEEcCCCeEEEEEH
Confidence 4456666443456678889999999988763 2333344443 2445555554 34567888888999988987
Q ss_pred CCCCCc
Q 019006 256 RPYAPQ 261 (347)
Q Consensus 256 ~~~~~~ 261 (347)
......
T Consensus 162 ~ei~~~ 167 (256)
T 1zvt_A 162 SDLPQL 167 (256)
T ss_dssp GGSCBC
T ss_pred HHCCCc
Confidence 654333
No 370
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=62.11 E-value=45 Score=30.51 Aligned_cols=59 Identities=12% Similarity=0.057 Sum_probs=42.8
Q ss_pred ceEEEEECCCCCEEEEeeC------------CCeEEEEeCCCceeeEEecCC-ccCeeeEEEcCCCCEEEEe
Q 019006 278 NLLKCGWSPDGSKVTAGSS------------DRMVYIWDTTSRRILYKLPGH-TGSVNESVFHATEPVIGSC 336 (347)
Q Consensus 278 ~~~~~~~s~~g~~l~sgs~------------dg~i~vwd~~~~~~~~~~~~h-~~~v~~~~~~~~~~~l~s~ 336 (347)
....+.|.++|.+.++... .+.++.++..++++...+.+. ..+++.++|+|+++.|..+
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEE
Confidence 4567889999998874321 236888888888876656543 3579999999999876543
No 371
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=53.66 E-value=11 Score=37.89 Aligned_cols=36 Identities=8% Similarity=0.066 Sum_probs=30.2
Q ss_pred eEEEEECCCCCEEEEeeCCCeEEEEeCCCceeeEEe
Q 019006 279 LLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKL 314 (347)
Q Consensus 279 ~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~~~~ 314 (347)
+.+++..++..+|++-+.|+.+|+|++.+++++...
T Consensus 240 ~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~ 275 (1139)
T 4fhn_B 240 IISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 275 (1139)
T ss_dssp BSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEE
T ss_pred eEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEee
Confidence 344556788899999999999999999999988754
No 372
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=53.22 E-value=1.1e+02 Score=26.31 Aligned_cols=167 Identities=9% Similarity=0.120 Sum_probs=89.3
Q ss_pred ceEEEeCCCC--CceeecCC-------CCceEEEEEc---CC----CCeEEEEe-cCCcEEEEeCCCCceEEEec-----
Q 019006 166 TAKLWDMRQR--GAIQTFPD-------KYQITAVSFS---DA----SDKIYTGG-IDNDVKVWDLRKGEVSMTLQ----- 223 (347)
Q Consensus 166 ~i~iwd~~~~--~~~~~~~~-------~~~v~~~~~~---~~----~~~l~~~~-~dg~i~iwd~~~~~~~~~~~----- 223 (347)
+|.+||+++. +.++.+.- ...+..+.++ +. ..+++.+. ..+.|.+||+.+++....+.
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~p 203 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKA 203 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSC
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCcc
Confidence 4566888877 66655432 2346777776 22 33444443 46679999999876443321
Q ss_pred ---------CC----CCceeEEEECCC----CCEEEEEcCCCcEEEEeC-----CCCCCcCceeEEEeccccccccceEE
Q 019006 224 ---------GH----QDMITGMSLSPD----GSYLLTNGMDCKLCIWDM-----RPYAPQNRCVKILEGHQHNFEKNLLK 281 (347)
Q Consensus 224 ---------~~----~~~i~~v~~~~~----~~~l~t~~~d~~i~~wd~-----~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (347)
+. ...+..|+++|+ ++.|.=....+ -++|-+ +.... ...++.+.... .......
T Consensus 204 d~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss-~~ly~V~T~~L~~~~~-~~~v~~~G~kg--~~s~~~~ 279 (381)
T 3q6k_A 204 ERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSA-IKVYSVNTKELKQKGG-KLNPELLGNRG--KYNDAIA 279 (381)
T ss_dssp CSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSC-SEEEEEEHHHHSSTTC-CCCCEEEEECC--TTCCEEE
T ss_pred ccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCC-CcEEEEEHHHhhCcch-hhceEEeeecC--CCCCcce
Confidence 11 134777888887 56555443332 123322 22111 11122221110 0123344
Q ss_pred EEEC-CCCCEEEEeeCCCeEEEEeCCC-c------eeeEEecCCccCeeeEEEcCCCCEEEEec
Q 019006 282 CGWS-PDGSKVTAGSSDRMVYIWDTTS-R------RILYKLPGHTGSVNESVFHATEPVIGSCS 337 (347)
Q Consensus 282 ~~~s-~~g~~l~sgs~dg~i~vwd~~~-~------~~~~~~~~h~~~v~~~~~~~~~~~l~s~s 337 (347)
.++. .+|.+.++--..+.|..|+... . +.+.+=+ --..+.++++.+++.+.+.+.
T Consensus 280 ~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~-~l~~pd~~~i~~~g~Lwv~sn 342 (381)
T 3q6k_A 280 LAYDPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSS-RFVFGTDISVDSKGGLWFMSN 342 (381)
T ss_dssp EEECTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECT-TCCSEEEEEECTTSCEEEEEC
T ss_pred EEEeCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECC-CccccCeEEECCCCeEEEEEC
Confidence 5665 5677777777888999999875 1 2222211 122467788877777665554
No 373
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=52.47 E-value=24 Score=33.21 Aligned_cols=36 Identities=17% Similarity=0.260 Sum_probs=28.0
Q ss_pred ceeEEEEcCCCCEEEEecCCCeEEEEECCCCceeeeee
Q 019006 102 AILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMA 139 (347)
Q Consensus 102 ~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 139 (347)
.|.++.+ +..++++-+.|+++|+|++.+++.+....
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~D 258 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYD 258 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeec
Confidence 3454444 36799999999999999999998776554
No 374
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=47.83 E-value=79 Score=29.09 Aligned_cols=58 Identities=26% Similarity=0.307 Sum_probs=38.7
Q ss_pred eEEEEEcCCCCeEEEEecC------------CcEEEEeCCCCceEEEecCC-CCceeEEEECCCCCEEEEE
Q 019006 187 ITAVSFSDASDKIYTGGID------------NDVKVWDLRKGEVSMTLQGH-QDMITGMSLSPDGSYLLTN 244 (347)
Q Consensus 187 v~~~~~~~~~~~l~~~~~d------------g~i~iwd~~~~~~~~~~~~~-~~~i~~v~~~~~~~~l~t~ 244 (347)
.-.+.|++.+.+++.-..+ +.+.+.+..+++...-+.++ ...++.++|+||++.|+..
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 4568899998855543221 23556666667655544443 3568999999999888775
No 375
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=46.24 E-value=1.3e+02 Score=25.10 Aligned_cols=238 Identities=11% Similarity=0.139 Sum_probs=120.5
Q ss_pred CCCCeEEEeeCCCcEEEEeccC---CCeeeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEECCC---------Cce
Q 019006 67 PAGTVIASGSHDRDIFLWHVHG---DCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVET---------GKQ 134 (347)
Q Consensus 67 ~~~~~l~s~~~d~~v~~w~~~~---~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~---------~~~ 134 (347)
|+...+++.+.+|-|+--.+.. .......++. .+.+..+......+.|+..+..|.+.-..... |..
T Consensus 3 ~~e~~~v~lT~~G~IKr~~~~~~~~~~~~~~~lke-~D~l~~~~~~~t~d~ll~fT~~Gr~~~~~~~elp~~~r~a~G~~ 81 (323)
T 1wp5_A 3 ASEDVIVTVTKDGYVKRTSLRSYAASNGQDFAMKD-TDRLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWKDLGQH 81 (323)
T ss_dssp SCCEEEEEEETTCEEEEEEHHHHHHTTTCCCCCCT-TCCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTTSCCEE
T ss_pred cCCcEEEEEeCCCEEEEeEHHHhhhcCccccccCC-CCEEEEEEEECCCCEEEEEECCCEEEEEEHHHCcCCCCCCCCcC
Confidence 4566777888888887654420 0000011222 23444444444456677777788766655421 221
Q ss_pred eeeee--ccCcceeEeecCCC--CCCEEEEEcCCCceEEEeCCC------CCcee--ecCCCCceEEEEEcCCCCeEEEE
Q 019006 135 IKKMA--EHNSFVNSCCPSRR--GPPLVVSGSDDGTAKLWDMRQ------RGAIQ--TFPDKYQITAVSFSDASDKIYTG 202 (347)
Q Consensus 135 ~~~~~--~~~~~v~~~~~~~~--~~~~~~s~~~d~~i~iwd~~~------~~~~~--~~~~~~~v~~~~~~~~~~~l~~~ 202 (347)
+..+. .....+..+..... ....++..+.+|.++--.+.. +.-+. .+.....+..+........++..
T Consensus 82 i~~~i~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e~d~lv~~~~~~~~~~i~l~ 161 (323)
T 1wp5_A 82 IANIIPIDRDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKNDDQVVDVHLTDGMNELFLV 161 (323)
T ss_dssp GGGTSCCCTTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCTTCCEEEEEEECSCSEEEEE
T ss_pred hhhccCCCCCCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCCCCEEEEEEEeCCCCEEEEE
Confidence 11111 11223333322221 234677789999999876531 11222 23333455555554456678888
Q ss_pred ecCCcEEEEeCCC---------CceEEEecCCCCceeEEEECCCCC-EEEEEcCCCcEEEEeCCCCCCcCc---eeEEEe
Q 019006 203 GIDNDVKVWDLRK---------GEVSMTLQGHQDMITGMSLSPDGS-YLLTNGMDCKLCIWDMRPYAPQNR---CVKILE 269 (347)
Q Consensus 203 ~~dg~i~iwd~~~---------~~~~~~~~~~~~~i~~v~~~~~~~-~l~t~~~d~~i~~wd~~~~~~~~~---~~~~~~ 269 (347)
+.+|.+..+.... |.....+.. .+.|.++..-+++. .+++.+..|..+..++..+....+ -+..++
T Consensus 162 T~~G~~irf~~~ev~~~gR~a~GV~~i~L~~-~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~e~~~~~Rg~kGv~~~~ 240 (323)
T 1wp5_A 162 THNGYALWFDESEVSIVGVRAAGVKGMNLKE-GDYIVSGQLITSKDESIVVATQRGAVKKMKLTEFEKATRAKRGVVILR 240 (323)
T ss_dssp ETTSEEEEEEGGGSCBCCSSCCCEECCCCCT-TCCEEEEEEECCTTCEEEEEETTSEEEEEEGGGSCCCCTTSCCEECSC
T ss_pred eCCCcEEEEEHHHCcccCCCCcCEEEEEeCC-CCEEEEEEEEcCCCcEEEEEECCCceEEEEHHHccccCCCCCCEECee
Confidence 9999988886531 112223322 34566664434444 788888888888888765433222 111121
Q ss_pred ccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCC
Q 019006 270 GHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTS 307 (347)
Q Consensus 270 ~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~ 307 (347)
....+ ...+..+..-.++..++.-+..|.+..+++..
T Consensus 241 ~~~~~-~~~l~~~~~v~~~~~i~~it~~g~~ir~~~~~ 277 (323)
T 1wp5_A 241 ELKAN-PHRISGFVVAQDSDTIYLQTEKSFIETIKVGD 277 (323)
T ss_dssp CCSSS-CCCEEEEEEECTTCEEEEEETTSCEEEEEGGG
T ss_pred ecCCC-CceEEEEEEeCCCCeEEEEeCCCeEEEEEhhh
Confidence 11000 11333322223345566667777776666543
No 376
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=45.65 E-value=1.2e+02 Score=27.78 Aligned_cols=60 Identities=23% Similarity=0.259 Sum_probs=40.5
Q ss_pred ceEEEEEcCCCCeEEEEec------------CCcEEEEeCCCCceEEEecCC-CCceeEEEECCCCCEEEEEc
Q 019006 186 QITAVSFSDASDKIYTGGI------------DNDVKVWDLRKGEVSMTLQGH-QDMITGMSLSPDGSYLLTNG 245 (347)
Q Consensus 186 ~v~~~~~~~~~~~l~~~~~------------dg~i~iwd~~~~~~~~~~~~~-~~~i~~v~~~~~~~~l~t~~ 245 (347)
....+.|++++.+.++... .+.++.++..+++...-+... ...++.++|+||++.|+++-
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 3567899998876663221 125777777777765544432 24689999999999887753
No 377
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=43.02 E-value=28 Score=32.82 Aligned_cols=30 Identities=17% Similarity=0.192 Sum_probs=25.8
Q ss_pred CCCCEEEEeeCCCeEEEEeCCCceeeEEec
Q 019006 286 PDGSKVTAGSSDRMVYIWDTTSRRILYKLP 315 (347)
Q Consensus 286 ~~g~~l~sgs~dg~i~vwd~~~~~~~~~~~ 315 (347)
.+..+|++-+.|..+|+|++.+++++....
T Consensus 229 ~~~~fLftL~~Dh~LRiWsL~t~~lv~t~D 258 (729)
T 3f7f_A 229 FHERYLIVLTQNCHLKIWDLTSFTLIQDYD 258 (729)
T ss_dssp ETTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred cCCcEEEEEEcCCeEEEEEcCCCceEEeec
Confidence 347899999999999999999999876543
No 378
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=42.45 E-value=1.6e+02 Score=25.12 Aligned_cols=238 Identities=14% Similarity=0.110 Sum_probs=124.7
Q ss_pred CCCCCeEEEeeCCCcEEEEecc-----C---CCeeeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEECCC------
Q 019006 66 NPAGTVIASGSHDRDIFLWHVH-----G---DCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVET------ 131 (347)
Q Consensus 66 ~~~~~~l~s~~~d~~v~~w~~~-----~---~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~------ 131 (347)
-|+...+++.+.+|-|+--.+. . .......++ ..+.+..+......+.|+..+..|.+.-+....
T Consensus 4 I~~e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~lk-e~D~l~~~~~~~t~d~ll~fT~~G~~~~~~~~eip~~~r 82 (370)
T 3l6v_A 4 IAPEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTK-EEDFIDQLWLVNTHDTLLTFTSSGKVFWLPVHQLPEAGS 82 (370)
T ss_dssp CCCCCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEECS-CCCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCT
T ss_pred ccCCCEEEEEeCCCEEEEeeHHHhhhhccCCCCceecccC-CCCEEEEEEEecCCCEEEEEeCCCeEEEEEHHHCcCCCc
Confidence 4677888899999998875432 0 011112222 245566655555566777777888776655321
Q ss_pred ---Cceeeeee--ccCcceeEeecCC--CCCCEEEEEcCCCceEEEeCCC-----CCce--eecCCCCceEEEEEcCCCC
Q 019006 132 ---GKQIKKMA--EHNSFVNSCCPSR--RGPPLVVSGSDDGTAKLWDMRQ-----RGAI--QTFPDKYQITAVSFSDASD 197 (347)
Q Consensus 132 ---~~~~~~~~--~~~~~v~~~~~~~--~~~~~~~s~~~d~~i~iwd~~~-----~~~~--~~~~~~~~v~~~~~~~~~~ 197 (347)
|..+..+. .....+..+.... .....++..+..|.++--.+.. +.-+ ..+.....+..+.......
T Consensus 83 ~a~G~~i~~ll~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~~d~lv~v~~~~~~~ 162 (370)
T 3l6v_A 83 NARGRPIINWIPLESGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDEGDALVGVALTDGDR 162 (370)
T ss_dssp TSCCEEGGGSCCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCTTCCEEEEEEECSCC
T ss_pred ccCCcCHhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCCCCEEEEEEEeCCCc
Confidence 22111110 1223344433322 2234778889999999876531 1111 1223334455555545566
Q ss_pred eEEEEecCCcEEEEeCCC---------CceEEEecCCCCceeEEEECC--------------------------------
Q 019006 198 KIYTGGIDNDVKVWDLRK---------GEVSMTLQGHQDMITGMSLSP-------------------------------- 236 (347)
Q Consensus 198 ~l~~~~~dg~i~iwd~~~---------~~~~~~~~~~~~~i~~v~~~~-------------------------------- 236 (347)
.++..+.+|.+..|+... |.....+.. .+.|.++...+
T Consensus 163 ~i~l~T~~G~~irf~~~~v~~~gR~a~GV~~i~L~~-~d~Vv~~~~~~~~~~~~~~~~~~~~~~~~~t~~g~~~~~~~~~ 241 (370)
T 3l6v_A 163 DVLLFASNGKTVRFGESTVRSMGRTATGVRGIRLAK-GEEVVSLIVSERAGGVEDEVEDESAEEVVETTDGAEPAVIDVA 241 (370)
T ss_dssp EEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCT-TCCEEEEEEECCC------------------------------
T ss_pred eEEEEeCCCeEEEEEccccCccCCCCCCeeeEEeCC-CCEEEEEEEeccccccccccccccccccccccccccccccccc
Confidence 788888889888776431 111222322 23455444333
Q ss_pred ---CCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEecccc-ccccceEEEEECCCCCEEEEeeCCCeEEEEeC
Q 019006 237 ---DGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQH-NFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDT 305 (347)
Q Consensus 237 ---~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~ 305 (347)
.+..+++.+..|..+...+..+....+.-+-...+.. .-...+..+.+-.+...|+.-+..|.+.-...
T Consensus 242 ~~~~~~~il~vTe~G~gKrt~~~e~~~~~Rg~kGv~~~k~~~~~g~lv~~~~v~~~d~i~liT~~G~~iR~~v 314 (370)
T 3l6v_A 242 DNGDVAYILTATENGYGKRTPLAEYPRKGRGTQGVIGIQTTERNGKLVRAVLLGSTDEVMLISDGGTLVRTRG 314 (370)
T ss_dssp -----CEEEEEETTSEEEEEEGGGSCCBCTTSCCEESSCCCTTTCSEEEEEEECTTCEEEEEETTCCEEEEEG
T ss_pred cccCCceEEEeeCCCCEEEEEHHHhcccccCCcceEEEEecCCCCcEEEEEEeCCCceEEEEcCCCeEEEeeH
Confidence 4568899999999999888765544332111111110 01123444333334455555666676666654
No 379
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=34.35 E-value=1.8e+02 Score=23.25 Aligned_cols=144 Identities=8% Similarity=-0.021 Sum_probs=72.6
Q ss_pred eEEEEecCCcEEEEeCCCCc-eEEEecCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCC---CCcCceeEEEecccc
Q 019006 198 KIYTGGIDNDVKVWDLRKGE-VSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPY---APQNRCVKILEGHQH 273 (347)
Q Consensus 198 ~l~~~~~dg~i~iwd~~~~~-~~~~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~---~~~~~~~~~~~~~~~ 273 (347)
.+++.+.+|.|+--...... ....+... +.+..+........++..+..|.++-...... ...+..+. .....
T Consensus 4 v~v~lT~~G~iKr~~~~~~~~~~~~lke~-D~l~~~~~~~t~~~ll~~T~~Gr~~~~~~~elp~~r~~G~~i~--~~i~L 80 (256)
T 1zvt_A 4 VTIVLSQMGWVRSAKGHDIDAPGLNYKAG-DSFKAAVKGKSNQPVVFVDSTGRSYAIDPITLPSARGQGEPLT--GKLTL 80 (256)
T ss_dssp EEEEEETTSEEEEEESSCCCSTTSCCCTT-CCEEEEEEEETTSCEEEEETTSEEEEECGGGSCCSSSCCEEGG--GTCCC
T ss_pred EEEEEeCCCEEEEeeCCcCCceeccCCCC-CEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCCCcCCCCeEee--eeecC
Confidence 45566777777655433211 11122322 33444444344455666677787766655432 11121110 00011
Q ss_pred ccccceEEEEECCCCCEEEEeeCCCeEEEEeCCC-------ceeeEEecCCccCeeeEEEc-CCCCEEEEecCCCcEEee
Q 019006 274 NFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTS-------RRILYKLPGHTGSVNESVFH-ATEPVIGSCSSDKQIYLG 345 (347)
Q Consensus 274 ~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~-------~~~~~~~~~h~~~v~~~~~~-~~~~~l~s~s~D~~i~i~ 345 (347)
.-.+.+..+....++.+|+..+..|.++...+.. +.....++.. ..+..+... .++..++..+.+|.+..+
T Consensus 81 ~~~e~Iv~~~~~~~~~~lll~T~~G~~Kr~~~~e~~~~~r~G~~~i~L~~~-d~lv~~~~~~~~~~~i~l~T~~G~~lrf 159 (256)
T 1zvt_A 81 PPGATVDHMLMESDDQKLLMASDAGYGFVCTFNDLVARNRAGKALITLPEN-AHVMPPVVIEDASDMLLAITQAGRMLMF 159 (256)
T ss_dssp CTTCCEEEEECCCTTCEEEEEBTTSEEEEEEGGGGCCCSTTCEECBCCCTT-CCBCCCEECCCTTCEEEEEETTSEEEEE
T ss_pred CCCCEEEEEEEeCCCCEEEEEeCCCeEEEeEHHHhcccCcCceEEEEECCC-CEEEEEEEecCCCCEEEEEcCCCeEEEE
Confidence 1123555554334567888999999999997643 2222234332 345555454 344566677777765543
No 380
>1zvu_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 3.00A {Escherichia coli}
Probab=33.37 E-value=3.1e+02 Score=25.80 Aligned_cols=78 Identities=9% Similarity=0.095 Sum_probs=49.3
Q ss_pred CCceEEEEEcCCCCeEEEEecCCcEEEEeCCC-------CceEEEecCCCCceeEEEEC-CCCCEEEEEcCCCcEEEEeC
Q 019006 184 KYQITAVSFSDASDKIYTGGIDNDVKVWDLRK-------GEVSMTLQGHQDMITGMSLS-PDGSYLLTNGMDCKLCIWDM 255 (347)
Q Consensus 184 ~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~-------~~~~~~~~~~~~~i~~v~~~-~~~~~l~t~~~d~~i~~wd~ 255 (347)
...|..+....+..+++.++..|.++.-.+.. +.....+... +.+..+... ..+..++..+.+|.+..|+.
T Consensus 553 ~e~i~~~~~~~~~~~l~~~T~~G~vk~~~l~~~~~~~~~g~~ai~L~~~-d~lv~~~~~~~~~~~v~l~t~~g~~lrf~~ 631 (716)
T 1zvu_A 553 GATVDHMLMESDDQKLLMASDAGYGFVCTFNDLVARNRAGKALITLPEN-AHVMPPVVIEDASDMLLAITQAGRMLMFPV 631 (716)
T ss_dssp TCCEEEEECCCTTCEEEEEBTTSEEEEEEGGGGCCCSTTCEECBCCCTT-CCBCCCEECCCTTCEEEEEETTSEEEEEES
T ss_pred CCeEEEEEEecCCceEEEEeCCceEEEecHHHhcccCccceEEEeeCCC-CEEEEEEEecCCCCEEEEEeCCCeEEEEEH
Confidence 34566555444677888899999999876532 2333444433 334444444 34567888899999999987
Q ss_pred CCCCCcC
Q 019006 256 RPYAPQN 262 (347)
Q Consensus 256 ~~~~~~~ 262 (347)
....+.+
T Consensus 632 ~~v~~~g 638 (716)
T 1zvu_A 632 SDLPQLS 638 (716)
T ss_dssp TTSCBCS
T ss_pred HHCCccC
Confidence 6543333
No 381
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=30.36 E-value=3.5e+02 Score=25.47 Aligned_cols=219 Identities=10% Similarity=0.018 Sum_probs=103.2
Q ss_pred eEEE-EcCCCCEEEEe-cCC----CeEEEEECCCCceeeeeeccCc-c-------eeEeecCCCCCCEEEEE--------
Q 019006 104 LDLH-WTTDGSQIISA-SPD----KTLRAWDVETGKQIKKMAEHNS-F-------VNSCCPSRRGPPLVVSG-------- 161 (347)
Q Consensus 104 ~~~~-~~~~~~~l~s~-~~d----g~i~iwd~~~~~~~~~~~~~~~-~-------v~~~~~~~~~~~~~~s~-------- 161 (347)
..+. ++|++++++.+ |.. ..++++|+.+++.+..-..... . ...+++. +...++++.
T Consensus 132 ~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~-d~~~~~~~~~~~~~~~~ 210 (711)
T 4hvt_A 132 RGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWI-NKDTIIFNLVLHKNEIT 210 (711)
T ss_dssp EEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEE-ETTEEEECCCCSTTCBC
T ss_pred eceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEE-CCCEEEEEeCCCCCCcC
Confidence 3444 78898876543 322 3699999999876532111100 0 0111221 112233321
Q ss_pred --cCCCceEEEeCCCCC----ceeecCCCCceEEEEEcCCCCe-----EEEEe---cCCcEEEEeCCC--CceEEEecCC
Q 019006 162 --SDDGTAKLWDMRQRG----AIQTFPDKYQITAVSFSDASDK-----IYTGG---IDNDVKVWDLRK--GEVSMTLQGH 225 (347)
Q Consensus 162 --~~d~~i~iwd~~~~~----~~~~~~~~~~v~~~~~~~~~~~-----l~~~~---~dg~i~iwd~~~--~~~~~~~~~~ 225 (347)
+...+++.|.+-+.. .+..-+..........++++++ +++.+ ....+++.|... ++ ...+...
T Consensus 211 ~~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~ 289 (711)
T 4hvt_A 211 SSLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLK-LQKINMP 289 (711)
T ss_dssp TTSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCE-EEECCSC
T ss_pred cCCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCc-ceEeecC
Confidence 122457777665432 1222222222334555666653 34333 224566666553 32 2233222
Q ss_pred CCceeEEEECCCCCEEEEE----------cCCCcEEEEeCCCCCC----cCceeEEEeccccccccceEEEEECCCCCEE
Q 019006 226 QDMITGMSLSPDGSYLLTN----------GMDCKLCIWDMRPYAP----QNRCVKILEGHQHNFEKNLLKCGWSPDGSKV 291 (347)
Q Consensus 226 ~~~i~~v~~~~~~~~l~t~----------~~d~~i~~wd~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l 291 (347)
.+ ..+..+.++..++.. ...+.|...|+..... .......+... ....+..+.|..+ .++
T Consensus 290 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~~~~~~-~l~ 363 (711)
T 4hvt_A 290 SD--ATLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPT---ANEVFNFISTTKD-RVF 363 (711)
T ss_dssp TT--CEEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCC---TTEEEEEEEECSS-CEE
T ss_pred Cc--ceEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCC---CCCeEEEEEEECC-EEE
Confidence 22 112233455544432 1356788888865321 01111112221 2345667778865 567
Q ss_pred EEeeCCCe--EEEEeCCCce-eeEE---ecCCccCeeeEEEcCCCC
Q 019006 292 TAGSSDRM--VYIWDTTSRR-ILYK---LPGHTGSVNESVFHATEP 331 (347)
Q Consensus 292 ~sgs~dg~--i~vwd~~~~~-~~~~---~~~h~~~v~~~~~~~~~~ 331 (347)
++...++. |+++|+.++. .+.. ++. .+.+..+...+++.
T Consensus 364 ~~~~~~~~~~l~~~~~~~g~~~~~~~i~lp~-~~~~~~~~~~~~~~ 408 (711)
T 4hvt_A 364 LATYDNVVAKVVTFTLENEQWTKPVVLKLPY-QNAIFGMSSYEEEE 408 (711)
T ss_dssp EEEEETTEEEEEEECEETTEECCCEEECCCS-TTCEEEEECCTTCS
T ss_pred EEEEECCEEEEEEEECCCCceEEEeccCCCC-CeEEEEEeecCcCC
Confidence 77777764 7778876664 2223 322 24566666666654
No 382
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=24.48 E-value=2.3e+02 Score=25.31 Aligned_cols=67 Identities=15% Similarity=0.086 Sum_probs=41.8
Q ss_pred ceEEEEEcCC----CC--eEEEEecCCcEEEEeCC-CCc-------eEEEecC--CCCceeEEEECCCCCEEEEEcCCCc
Q 019006 186 QITAVSFSDA----SD--KIYTGGIDNDVKVWDLR-KGE-------VSMTLQG--HQDMITGMSLSPDGSYLLTNGMDCK 249 (347)
Q Consensus 186 ~v~~~~~~~~----~~--~l~~~~~dg~i~iwd~~-~~~-------~~~~~~~--~~~~i~~v~~~~~~~~l~t~~~d~~ 249 (347)
..++++.+.- ++ .++.|+.+|.|.-.-+. .+. ...+++- ...+|..|.++++..+|..++.++.
T Consensus 405 ~lT~IaVd~v~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V 484 (495)
T 1q47_A 405 QFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGV 484 (495)
T ss_dssp CEEEEEEEEEECSSCEEEEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCE
T ss_pred ceEEEEEEEEccCCCcEEEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeE
Confidence 3466655422 33 46789999987544332 211 1223332 3468899999999999999998876
Q ss_pred EEE
Q 019006 250 LCI 252 (347)
Q Consensus 250 i~~ 252 (347)
+++
T Consensus 485 ~~v 487 (495)
T 1q47_A 485 AQL 487 (495)
T ss_dssp EEE
T ss_pred EEE
Confidence 655
No 383
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=20.29 E-value=4.6e+02 Score=23.35 Aligned_cols=68 Identities=10% Similarity=0.060 Sum_probs=42.3
Q ss_pred cEEEEEECC----CC--CeEEEeeCCCcEEEEeccCCC-------eeeEEEe--CcccceeEEEEcCCCCEEEEecCCCe
Q 019006 59 AVYTMKFNP----AG--TVIASGSHDRDIFLWHVHGDC-------KNFMVLK--GHKNAILDLHWTTDGSQIISASPDKT 123 (347)
Q Consensus 59 ~V~~v~~~~----~~--~~l~s~~~d~~v~~w~~~~~~-------~~~~~~~--~h~~~v~~~~~~~~~~~l~s~~~dg~ 123 (347)
..++|+... ++ ..++.|..+|.|.=.-+.... ..+..+. ....+|..|.++++..+|+.++.++.
T Consensus 405 ~lT~IaVd~v~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V 484 (495)
T 1q47_A 405 QFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGV 484 (495)
T ss_dssp CEEEEEEEEEECSSCEEEEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCE
T ss_pred ceEEEEEEEEccCCCcEEEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeE
Confidence 355555432 24 467889999987543332111 1111222 23568999999999999999998887
Q ss_pred EEE
Q 019006 124 LRA 126 (347)
Q Consensus 124 i~i 126 (347)
++|
T Consensus 485 ~~v 487 (495)
T 1q47_A 485 AQL 487 (495)
T ss_dssp EEE
T ss_pred EEE
Confidence 765
Done!