Query         019006
Match_columns 347
No_of_seqs    343 out of 2264
Neff          10.8
Searched_HMMs 13730
Date          Mon Mar 25 09:26:26 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019006.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/019006hhsearch_scop -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d1vyhc1 b.69.4.1 (C:92-408) Pl 100.0 6.8E-45 4.9E-49  310.9  40.3  286   51-346    11-317 (317)
  2 d1gxra_ b.69.4.1 (A:) Groucho/ 100.0 2.5E-44 1.8E-48  312.6  41.5  280   55-347    49-335 (337)
  3 d1tbga_ b.69.4.1 (A:) beta1-su 100.0 1.9E-43 1.4E-47  305.7  44.0  290   48-346    46-340 (340)
  4 d1erja_ b.69.4.1 (A:) Tup1, C- 100.0 6.5E-44 4.7E-48  315.1  39.1  288   53-347    58-385 (388)
  5 d1nr0a1 b.69.4.1 (A:2-312) Act 100.0 1.2E-41 8.6E-46  292.4  38.6  286   55-347    15-310 (311)
  6 d1nr0a2 b.69.4.1 (A:313-611) A 100.0 7.7E-41 5.6E-45  285.2  33.8  285   50-347     5-297 (299)
  7 d1k8kc_ b.69.4.1 (C:) Arp2/3 c 100.0 8.6E-41 6.2E-45  294.1  35.1  281   57-347     7-358 (371)
  8 d1nr0a1 b.69.4.1 (A:2-312) Act 100.0 5.2E-39 3.8E-43  275.8  35.2  251   49-306    50-311 (311)
  9 d2ovrb2 b.69.4.1 (B:2365-2706) 100.0 4.7E-38 3.5E-42  271.2  34.8  285   48-347     7-338 (342)
 10 d1nexb2 b.69.4.1 (B:370-744) C 100.0 1.6E-37 1.1E-41  269.3  32.4  278   50-345     5-350 (355)
 11 d1gxra_ b.69.4.1 (A:) Groucho/ 100.0 8.7E-37 6.3E-41  264.8  36.9  242   53-305    93-335 (337)
 12 d1pgua1 b.69.4.1 (A:2-326) Act 100.0 8.9E-36 6.5E-40  257.2  35.3  284   59-347    19-325 (325)
 13 d1pgua2 b.69.4.1 (A:327-613) A 100.0 2.7E-36   2E-40  255.4  28.5  271   47-347     3-286 (287)
 14 d1p22a2 b.69.4.1 (A:253-545) F 100.0 7.5E-35 5.5E-39  245.5  36.7  272   51-346     9-293 (293)
 15 d1vyhc1 b.69.4.1 (C:92-408) Pl 100.0 2.8E-35   2E-39  250.8  34.1  246   93-347    10-276 (317)
 16 d1yfqa_ b.69.4.2 (A:) Cell cyc 100.0   1E-35 7.5E-40  256.0  28.1  296   50-346     4-320 (342)
 17 d1k8kc_ b.69.4.1 (C:) Arp2/3 c 100.0 3.3E-35 2.4E-39  258.2  30.7  241  100-346     7-270 (371)
 18 d1pgua1 b.69.4.1 (A:2-326) Act 100.0 5.2E-34 3.8E-38  246.0  34.9  252   49-305    54-325 (325)
 19 d1erja_ b.69.4.1 (A:) Tup1, C- 100.0 1.3E-33 9.2E-38  248.7  35.8  268   74-347    33-337 (388)
 20 d1sq9a_ b.69.4.1 (A:) Antivira 100.0 4.6E-34 3.3E-38  252.8  32.5  273   51-330     8-347 (393)
 21 d1nr0a2 b.69.4.1 (A:313-611) A 100.0 7.1E-33 5.2E-37  235.5  32.2  241   92-347     4-253 (299)
 22 d1tbga_ b.69.4.1 (A:) beta1-su 100.0 2.7E-31   2E-35  228.8  36.9  247   92-347    47-299 (340)
 23 d1sq9a_ b.69.4.1 (A:) Antivira 100.0 3.4E-31 2.5E-35  234.2  26.1  246   95-347     9-318 (393)
 24 d1nexb2 b.69.4.1 (B:370-744) C 100.0 7.1E-30 5.2E-34  220.6  31.1  238   94-347     6-270 (355)
 25 d2ovrb2 b.69.4.1 (B:2365-2706) 100.0 2.2E-29 1.6E-33  216.4  30.7  241   89-347     5-287 (342)
 26 d1yfqa_ b.69.4.2 (A:) Cell cyc 100.0 7.2E-30 5.2E-34  219.1  23.5  250   93-347     4-280 (342)
 27 d1k32a3 b.69.9.1 (A:320-679) T 100.0 6.9E-30   5E-34  221.9  17.9  281   54-347    39-343 (360)
 28 d1p22a2 b.69.4.1 (A:253-545) F 100.0 1.9E-26 1.4E-30  193.5  31.9  233   95-347    10-245 (293)
 29 d1pgua2 b.69.4.1 (A:327-613) A 100.0 1.5E-27 1.1E-31  201.2  24.4  229   91-347     4-244 (287)
 30 d1l0qa2 b.69.2.3 (A:1-301) Sur  99.9   1E-23 7.5E-28  178.0  38.0  262   72-347     5-273 (301)
 31 d1hzua2 b.70.2.1 (A:118-543) C  99.9   5E-25 3.6E-29  196.4  28.1  294   49-347    54-395 (426)
 32 d1qksa2 b.70.2.1 (A:136-567) C  99.9 8.2E-26   6E-30  201.6  21.3  292   50-346    55-400 (432)
 33 d1k32a3 b.69.9.1 (A:320-679) T  99.9 1.8E-24 1.3E-28  187.4  17.7  274   62-347     7-305 (360)
 34 d1l0qa2 b.69.2.3 (A:1-301) Sur  99.9 2.5E-21 1.8E-25  163.2  35.4  245   58-315    32-283 (301)
 35 d1pbyb_ b.69.2.2 (B:) Quinohem  99.9 2.7E-22   2E-26  171.8  28.5  264   70-347     2-308 (337)
 36 d1hzua2 b.70.2.1 (A:118-543) C  99.9 6.7E-22 4.9E-26  175.9  31.5  270   70-347    33-339 (426)
 37 d1jmxb_ b.69.2.2 (B:) Quinohem  99.9 4.8E-22 3.5E-26  170.8  25.1  271   63-347     2-320 (346)
 38 d1qksa2 b.70.2.1 (A:136-567) C  99.9 1.5E-20 1.1E-24  167.2  31.4  265   70-347    33-357 (432)
 39 d1ri6a_ b.69.11.1 (A:) Putativ  99.9 5.3E-19 3.9E-23  151.0  32.3  277   71-347     6-305 (333)
 40 d2madh_ b.69.2.1 (H:) Methylam  99.9 3.6E-18 2.6E-22  148.4  34.2  285   53-347    16-348 (373)
 41 d1pbyb_ b.69.2.2 (B:) Quinohem  99.9 1.9E-19 1.4E-23  153.7  25.6  246   55-316    31-319 (337)
 42 d2bbkh_ b.69.2.1 (H:) Methylam  99.8 1.1E-17 8.1E-22  144.1  27.8  273   64-347     8-330 (355)
 43 d1jmxb_ b.69.2.2 (B:) Quinohem  99.8 1.8E-18 1.3E-22  148.1  21.4  254   51-319    32-334 (346)
 44 d1ri6a_ b.69.11.1 (A:) Putativ  99.8 4.9E-16 3.5E-20  132.2  32.0  252   54-310    33-312 (333)
 45 d2bbkh_ b.69.2.1 (H:) Methylam  99.8 3.5E-16 2.5E-20  134.5  28.4  255   61-329    50-354 (355)
 46 d2madh_ b.69.2.1 (H:) Methylam  99.8 3.1E-15 2.2E-19  129.5  34.2  253   62-329    70-372 (373)
 47 d1mdah_ b.69.2.1 (H:) Methylam  99.6 2.9E-14 2.1E-18  123.4  21.9  280   58-347    20-344 (368)
 48 d1qnia2 b.69.3.1 (A:10-450) Ni  99.6 1.8E-14 1.3E-18  125.3  19.8  267   72-341    14-394 (441)
 49 d1mdah_ b.69.2.1 (H:) Methylam  99.6   9E-14 6.5E-18  120.3  23.1  240   62-317    69-356 (368)
 50 d2bgra1 b.70.3.1 (A:39-508) Di  99.4   2E-11 1.4E-15  108.8  23.4   81   53-136    57-146 (470)
 51 d1qnia2 b.69.3.1 (A:10-450) Ni  99.4 1.9E-10 1.4E-14   99.7  24.0  223  115-347    14-340 (441)
 52 d1rwia_ b.68.9.1 (A:) Serine/t  99.3 4.4E-09 3.2E-13   85.7  28.0  235  102-345    15-250 (260)
 53 d2bgra1 b.70.3.1 (A:39-508) Di  99.3   1E-10 7.5E-15  104.0  18.5  139   62-206    21-192 (470)
 54 d1jofa_ b.69.10.1 (A:) 3-carbo  99.3 7.7E-09 5.6E-13   88.6  29.6  247  100-347    39-339 (365)
 55 d2hqsa1 b.68.4.1 (A:163-431) T  99.2 3.7E-08 2.7E-12   80.1  29.2  219   54-286    35-267 (269)
 56 d2dg1a1 b.68.6.1 (A:6-324) Lac  99.2   1E-07 7.6E-12   79.7  32.3  234  102-338    41-294 (319)
 57 d1pjxa_ b.68.6.1 (A:) Diisopro  99.2 8.4E-08 6.1E-12   80.1  31.1  241  102-346    19-296 (314)
 58 d1q7fa_ b.68.9.1 (A:) Brain tu  99.2 1.1E-07 7.8E-12   78.0  31.2  233  103-347    25-271 (279)
 59 d2hqsa1 b.68.4.1 (A:163-431) T  99.2 6.9E-08   5E-12   78.4  29.6  237   80-329    20-268 (269)
 60 d1rwia_ b.68.9.1 (A:) Serine/t  99.2 5.1E-08 3.7E-12   79.1  27.7  240   56-306    12-253 (260)
 61 d2p4oa1 b.68.6.3 (A:4-305) Hyp  99.1 8.5E-08 6.2E-12   79.6  27.9  227   59-297    29-274 (302)
 62 d2p4oa1 b.68.6.3 (A:4-305) Hyp  99.1 2.1E-07 1.5E-11   77.2  29.7  224  102-335    29-270 (302)
 63 d1jofa_ b.69.10.1 (A:) 3-carbo  99.1 4.5E-08 3.3E-12   83.7  26.1  249   57-308    39-342 (365)
 64 d1q7fa_ b.68.9.1 (A:) Brain tu  99.1 6.7E-07 4.9E-11   73.1  31.3  237   58-308    23-274 (279)
 65 d1pjxa_ b.68.6.1 (A:) Diisopro  99.0 1.9E-06 1.4E-10   71.6  30.2  240   58-307    18-299 (314)
 66 d2dg1a1 b.68.6.1 (A:6-324) Lac  98.8 2.4E-05 1.8E-09   64.9  33.7  237   53-296    35-294 (319)
 67 d2ghsa1 b.68.6.1 (A:20-314) Re  98.6 7.8E-05 5.7E-09   61.0  29.7  224  106-338    23-261 (295)
 68 d1xfda1 b.70.3.1 (A:127-591) D  98.4 5.6E-05 4.1E-09   66.1  24.4  136   64-203    23-191 (465)
 69 d1xfda1 b.70.3.1 (A:127-591) D  98.4 0.00011   8E-09   64.2  24.8  273   59-336    62-427 (465)
 70 d1k32a2 b.68.7.1 (A:39-319) Tr  98.0 0.00045 3.2E-08   55.2  19.8   68   65-135     6-81  (281)
 71 d2ghsa1 b.68.6.1 (A:20-314) Re  98.0  0.0021 1.5E-07   52.1  28.6  218   62-294    22-258 (295)
 72 d1k32a2 b.68.7.1 (A:39-319) Tr  98.0 0.00036 2.6E-08   55.8  17.7  222  108-347     6-260 (281)
 73 d1k3ia3 b.69.1.1 (A:151-537) G  97.7  0.0092 6.7E-07   49.8  28.2  271   64-338    26-363 (387)
 74 d1fwxa2 b.69.3.1 (A:8-451) Nit  97.7   0.002 1.5E-07   54.0  17.6  192  111-307    98-359 (459)
 75 d1utca2 b.69.6.1 (A:4-330) Cla  97.6   0.009 6.5E-07   47.5  32.3  254   79-343    45-322 (327)
 76 d1fwxa2 b.69.3.1 (A:8-451) Nit  97.6   0.016 1.1E-06   48.6  24.3  191  155-347   100-357 (459)
 77 d2ad6a1 b.70.1.1 (A:1-571) Met  97.5    0.03 2.2E-06   49.5  25.7  146  112-258   115-336 (571)
 78 d1npea_ b.68.5.1 (A:) Nidogen   97.3   0.026 1.9E-06   44.4  33.0  222   97-329    32-261 (263)
 79 d1w6sa_ b.70.1.1 (A:) Methanol  97.2   0.065 4.7E-06   47.6  26.8  147  113-259   122-344 (596)
 80 d1ijqa1 b.68.5.1 (A:377-642) L  96.9   0.058 4.2E-06   42.4  33.0  239   80-328    11-260 (266)
 81 d2ad6a1 b.70.1.1 (A:1-571) Met  96.8    0.15 1.1E-05   45.0  27.8   45  287-331   474-519 (571)
 82 d1w6sa_ b.70.1.1 (A:) Methanol  96.7    0.18 1.3E-05   44.6  25.7   46  286-331   482-528 (596)
 83 d1npea_ b.68.5.1 (A:) Nidogen   96.5    0.13 9.6E-06   40.2  25.6  201   53-256    31-237 (263)
 84 d1kv9a2 b.70.1.1 (A:1-560) Qui  96.5    0.25 1.8E-05   43.3  23.2  234  112-346   117-485 (560)
 85 d1utca2 b.69.6.1 (A:4-330) Cla  96.4    0.15 1.1E-05   40.3  21.5  171   79-250   122-321 (327)
 86 d1kb0a2 b.70.1.1 (A:1-573) Qui  96.0    0.44 3.2E-05   41.8  21.4  147  113-259   129-348 (573)
 87 d1kv9a2 b.70.1.1 (A:1-560) Qui  95.7    0.58 4.3E-05   40.8  25.9   49  286-334   467-517 (560)
 88 d1v04a_ b.68.6.2 (A:) Serum pa  94.5    0.92 6.7E-05   36.6  23.0   31  227-257   206-237 (340)
 89 d1k3ia3 b.69.1.1 (A:151-537) G  94.4       1 7.6E-05   36.5  18.5   95  208-309    54-158 (387)
 90 d1h6la_ b.68.3.1 (A:) Thermost  94.2     1.1 7.9E-05   36.3  21.5  198  110-313    38-270 (353)
 91 d1ijqa1 b.68.5.1 (A:377-642) L  93.8     1.1 7.7E-05   34.8  29.0  212  123-344    11-233 (266)
 92 d1h6la_ b.68.3.1 (A:) Thermost  93.1     1.8 0.00013   35.0  22.1  184  156-346    41-260 (353)
 93 d1xipa_ b.69.14.1 (A:) Nucleop  92.8     2.1 0.00015   35.0  17.4  141  186-336    88-230 (381)
 94 d1v04a_ b.68.6.2 (A:) Serum pa  92.7       2 0.00014   34.6  17.2  136  205-346    67-234 (340)
 95 d1kb0a2 b.70.1.1 (A:1-573) Qui  92.5       3 0.00022   36.2  19.8   45  287-331   487-532 (573)
 96 d1flga_ b.70.1.1 (A:) Ethanol   91.9     3.6 0.00026   35.7  25.5   48  298-346   466-513 (582)
 97 d1flga_ b.70.1.1 (A:) Ethanol   90.5     4.9 0.00036   34.8  28.6   47  285-331   494-541 (582)
 98 d1qfma1 b.69.7.1 (A:1-430) Pro  90.2     4.3 0.00031   33.6  28.5  244   55-310   122-417 (430)
 99 d1xipa_ b.69.14.1 (A:) Nucleop  90.0     4.2  0.0003   33.1  17.7  135   60-202    39-188 (381)
100 d1crua_ b.68.2.1 (A:) Soluble   87.0     7.4 0.00054   32.4  18.8   53  185-237    27-87  (450)
101 d1zgka1 b.68.11.1 (A:322-609)   86.7     5.3 0.00038   30.4  14.0   55  287-341   195-254 (288)
102 d1crua_ b.68.2.1 (A:) Soluble   84.4     3.7 0.00027   34.4  10.5  108  227-338    27-163 (450)
103 d1qfma1 b.69.7.1 (A:1-430) Pro  83.3      11 0.00078   31.0  27.6  223  102-331   126-392 (430)
104 d1wp5a_ b.68.10.1 (A:) Topoiso  61.7      33  0.0024   26.7  24.7  194  110-306     3-224 (323)
105 d2hu7a1 b.69.7.2 (A:9-321) Acy  59.2      30  0.0022   25.4  21.6  211  112-346    26-265 (313)
106 d1jtdb_ b.69.5.2 (B:) beta-lac  57.4      34  0.0025   25.5  18.4  218  101-346    26-245 (273)
107 d2nt0a1 b.71.1.2 (A:1-77,A:432  56.4      24  0.0017   23.8   7.1   49  277-327    88-141 (143)
108 d2hu7a1 b.69.7.2 (A:9-321) Acy  55.1      35  0.0026   25.0  21.6  135  153-304   112-265 (313)
109 d1wp5a_ b.68.10.1 (A:) Topoiso  52.8      47  0.0034   25.7  22.1  236   67-306     3-276 (323)
110 d1suua_ b.68.10.1 (A:) DNA gyr  42.2      68  0.0049   24.5  24.0  191  114-307     3-224 (304)
111 d1suua_ b.68.10.1 (A:) DNA gyr  34.9      89  0.0065   23.8  17.9  149  155-306   107-275 (304)
112 d1q47a_ b.69.12.1 (A:) Semapho  33.8 1.2E+02  0.0088   25.0  10.0   78   49-126   395-487 (495)
113 d1q47a_ b.69.12.1 (A:) Semapho  30.3      67  0.0049   26.6   7.3   55  198-252   423-487 (495)
114 d1c8ua2 d.38.1.3 (A:116-286) T  25.9      16  0.0012   25.4   2.1   22   62-83    148-169 (171)
115 d1c8ua2 d.38.1.3 (A:116-286) T  25.3      19  0.0014   25.0   2.4   29  318-346   143-171 (171)
116 d1zgka1 b.68.11.1 (A:322-609)   23.5 1.3E+02  0.0092   21.8  13.3   50  166-217    20-81  (288)
117 d1jtdb_ b.69.5.2 (B:) beta-lac  21.7 1.4E+02    0.01   21.8  15.2  219   59-305    27-246 (273)
118 d1dlpa1 b.78.1.1 (A:1-115) Fet  21.3      50  0.0037   21.0   3.8   13  281-293    29-41  (115)

No 1  
>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00  E-value=6.8e-45  Score=310.89  Aligned_cols=286  Identities=26%  Similarity=0.458  Sum_probs=257.8

Q ss_pred             eEecCccccEEEEEECCCCCeEEEeeCCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEECC
Q 019006           51 MLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVE  130 (347)
Q Consensus        51 ~~~~~h~~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~  130 (347)
                      ..|+||.+.|++|+|+|++++||||+.||+|++||+.. .+....+.+|...|.+++|++++.++++++.++.+.+|+..
T Consensus        11 ~~L~GH~~~I~~l~~sp~~~~l~s~s~Dg~i~iWd~~~-~~~~~~~~~h~~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (317)
T d1vyhc1          11 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYET-GDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ   89 (317)
T ss_dssp             CEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTT-CCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETT
T ss_pred             EEEcCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCC-CCEEEEEeCCCCcEEEEeeeccccccccccccccccccccc
Confidence            46899999999999999999999999999999999864 45567889999999999999999999999999999999999


Q ss_pred             CCceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeecC-CCCceEEEEEcCCCCeEEEEecCCcEE
Q 019006          131 TGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFP-DKYQITAVSFSDASDKIYTGGIDNDVK  209 (347)
Q Consensus       131 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~  209 (347)
                      ..+....+..+...+..+.+.+.+ ..+++++.|+.+++||++++.....+. +...+.++++++++..+++++.|+.|+
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~  168 (317)
T d1vyhc1          90 GFECIRTMHGHDHNVSSVSIMPNG-DHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVR  168 (317)
T ss_dssp             SSCEEECCCCCSSCEEEEEECSSS-SEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred             ccccccccccccccceeeeccCCC-ceEEeeccCcceeEeecccceeeeEEccCCCcceeeecccCCCEEEEEeCCCeEE
Confidence            888877777888888888877765 578899999999999999888777765 456789999999999999999999999


Q ss_pred             EEeCCCCceEEEecCCCCceeEEEECCCC--------------------CEEEEEcCCCcEEEEeCCCCCCcCceeEEEe
Q 019006          210 VWDLRKGEVSMTLQGHQDMITGMSLSPDG--------------------SYLLTNGMDCKLCIWDMRPYAPQNRCVKILE  269 (347)
Q Consensus       210 iwd~~~~~~~~~~~~~~~~i~~v~~~~~~--------------------~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~  269 (347)
                      +|++.+++....+.+|...+.++.|+|++                    .++++++.|+.|++||++.    ..++..+.
T Consensus       169 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~----~~~~~~~~  244 (317)
T d1vyhc1         169 VWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVST----GMCLMTLV  244 (317)
T ss_dssp             EEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTT----TEEEEEEE
T ss_pred             EEeeccceeeEEEecCCCCceEEEEeeccccceeeccccceeeeeccCCceeEeccCCCEEEEEECCC----CcEEEEEe
Confidence            99999999999999999999999998764                    4689999999999999874    45566666


Q ss_pred             ccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCCceeeEEecCCccCeeeEEEcCCCCEEEEecCCCcEEeec
Q 019006          270 GHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGE  346 (347)
Q Consensus       270 ~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~i~~  346 (347)
                      +|.    ..+.+++|+|++++|++|+.||.|++||+.+++++..+.+|.+.|++++|+|++++|+|+|.||+|+|||
T Consensus       245 ~~~----~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~s~s~Dg~i~iWd  317 (317)
T d1vyhc1         245 GHD----NWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE  317 (317)
T ss_dssp             CCS----SCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC
T ss_pred             CCC----CCEEEEEECCCCCEEEEEECCCeEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEeC
Confidence            653    5788999999999999999999999999999999999999999999999999999999999999999997


No 2  
>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.5e-44  Score=312.65  Aligned_cols=280  Identities=19%  Similarity=0.320  Sum_probs=240.4

Q ss_pred             CccccEEEEEECCCCCeEEEeeCCCcEEEEeccCCC--e--eeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEECC
Q 019006           55 GHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDC--K--NFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVE  130 (347)
Q Consensus        55 ~h~~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~--~--~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~  130 (347)
                      +|...|.+|+|+|+|++||+|+ ||.|++||+....  .  ......+|...|.+++|+|++++|++++.||.|++||+.
T Consensus        49 ~H~~~V~~v~fs~~g~~latg~-dg~V~iWd~~~~~~~~~~~~~~~~~h~~~I~~v~~s~dg~~l~s~~~dg~i~iwd~~  127 (337)
T d1gxra_          49 NHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLA  127 (337)
T ss_dssp             CCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECC
T ss_pred             CCCCcEEEEEECCCCCEEEEEE-CCEEEEEEccCCcccceeEEeeecCCCCcEEEEEEcCCCCEEEEeeccccccccccc
Confidence            8999999999999999999987 8999999985321  1  223446799999999999999999999999999999987


Q ss_pred             CC--ceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeecC-CCCceEEEEEcCCCCeEEEEecCCc
Q 019006          131 TG--KQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFP-DKYQITAVSFSDASDKIYTGGIDND  207 (347)
Q Consensus       131 ~~--~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~  207 (347)
                      ..  +....+..|...+..+.+++.+ .++++++.|+.+++||+.++....... +...+.+++|++++..+++++.|+.
T Consensus       128 ~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~~~~~~~d~~  206 (337)
T d1gxra_         128 APTPRIKAELTSSAPACYALAISPDS-KVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNT  206 (337)
T ss_dssp             CC--EEEEEEECSSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred             cccccccccccccccccccccccccc-ccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            54  4455667778888888887654 588899999999999999887766554 4678999999999999999999999


Q ss_pred             EEEEeCCCCceEEEecCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCC
Q 019006          208 VKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPD  287 (347)
Q Consensus       208 i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~  287 (347)
                      +++||+++++....+. |...|.+++|+|+++++++++.|+.+++||++...    .. ....|    ...+.+++|+|+
T Consensus       207 v~i~d~~~~~~~~~~~-~~~~i~~l~~~~~~~~l~~~~~d~~i~i~d~~~~~----~~-~~~~~----~~~i~~v~~s~~  276 (337)
T d1gxra_         207 VRSWDLREGRQLQQHD-FTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPD----KY-QLHLH----ESCVLSLKFAYC  276 (337)
T ss_dssp             EEEEETTTTEEEEEEE-CSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSC----EE-EECCC----SSCEEEEEECTT
T ss_pred             ccccccccceeecccc-cccceEEEEEcccccccceeccccccccccccccc----cc-ccccc----ccccceEEECCC
Confidence            9999999988776654 67889999999999999999999999999997432    11 22222    457899999999


Q ss_pred             CCEEEEeeCCCeEEEEeCCCceeeEEecCCccCeeeEEEcCCCCEEEEecCCCcEEeecC
Q 019006          288 GSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGEI  347 (347)
Q Consensus       288 g~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~i~~~  347 (347)
                      |++|++|+.||.|++||+.+++.+..+ .|...|.+++|+|++++|++++.||+|+||||
T Consensus       277 g~~l~s~s~Dg~i~iwd~~~~~~~~~~-~~~~~v~~~~~s~d~~~l~t~s~D~~I~vWdl  335 (337)
T d1gxra_         277 GKWFVSTGKDNLLNAWRTPYGASIFQS-KESSSVLSCDISVDDKYIVTGSGDKKATVYEV  335 (337)
T ss_dssp             SSEEEEEETTSEEEEEETTTCCEEEEE-ECSSCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred             CCEEEEEeCCCeEEEEECCCCCEEEEc-cCCCCEEEEEEeCCCCEEEEEeCCCeEEEEEE
Confidence            999999999999999999999988776 47889999999999999999999999999996


No 3  
>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}
Probab=100.00  E-value=1.9e-43  Score=305.73  Aligned_cols=290  Identities=19%  Similarity=0.343  Sum_probs=244.7

Q ss_pred             cCeeEecCccccEEEEEECCCCCeEEEeeCCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEE
Q 019006           48 SPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAW  127 (347)
Q Consensus        48 ~~~~~~~~h~~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw  127 (347)
                      .+..+|+||.+.|++|+|+|++++||||+.||+|++||+.. ......+..|...|.+++|+|++.++++++.|+.+++|
T Consensus        46 ~~~~tL~GH~~~I~~l~~s~~~~~l~sgs~Dg~v~iWd~~~-~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~d~~i~~~  124 (340)
T d1tbga_          46 RTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYT-TNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIY  124 (340)
T ss_dssp             CEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTT-TEEEEEEECSCSCEEEEEECTTSSEEEEEETTCCEEEE
T ss_pred             eeeEEECCCCCCEEEEEECCCCCEEEEEECCCceeeeeccc-ceeEEEEecccccEEeeEeeccceeeeeecccceeecc
Confidence            34568999999999999999999999999999999999964 45667788999999999999999999999999999999


Q ss_pred             ECCCCc----eeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceee-cCCCCceEEEEEcCCCCeEEEE
Q 019006          128 DVETGK----QIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQT-FPDKYQITAVSFSDASDKIYTG  202 (347)
Q Consensus       128 d~~~~~----~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~  202 (347)
                      +.....    ....+..|...........  ...+.....+.....++......... ......+....+.+....++++
T Consensus       125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  202 (340)
T d1tbga_         125 NLKTREGNVRVSRELAGHTGYLSCCRFLD--DNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSG  202 (340)
T ss_dssp             ESSSSCSCCCEEEEECCCSSCEEEEEEEE--TTEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSEEEEE
T ss_pred             cccccccccccceeccccccccccccccc--ccccccccccccccccccccccccccccccceeEeeeccccccceeEEe
Confidence            976543    2334444554444333322  24677788888888888776544433 3445678889999999999999


Q ss_pred             ecCCcEEEEeCCCCceEEEecCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEeccccccccceEEE
Q 019006          203 GIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKC  282 (347)
Q Consensus       203 ~~dg~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (347)
                      +.|+.|++||+++++....+.+|...|++++|+|++++|++++.|+.|++||++..    .....+...  .....+..+
T Consensus       203 ~~d~~v~i~d~~~~~~~~~~~~h~~~i~~v~~~p~~~~l~s~s~d~~i~~~~~~~~----~~~~~~~~~--~~~~~i~~~  276 (340)
T d1tbga_         203 ACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRAD----QELMTYSHD--NIICGITSV  276 (340)
T ss_dssp             ETTTEEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT----EEEEEECCT--TCCSCEEEE
T ss_pred             ecCceEEEEECCCCcEEEEEeCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeeccc----ccccccccc--cccCceEEE
Confidence            99999999999999999999999999999999999999999999999999998743    223333222  223568899


Q ss_pred             EECCCCCEEEEeeCCCeEEEEeCCCceeeEEecCCccCeeeEEEcCCCCEEEEecCCCcEEeec
Q 019006          283 GWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGE  346 (347)
Q Consensus       283 ~~s~~g~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~i~~  346 (347)
                      +|+|++++|++|+.||.|++||+.+++++..+.+|.+.|++++|+|++++|+|+|.||+|+|||
T Consensus       277 ~~s~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~H~~~V~~l~~s~d~~~l~s~s~Dg~v~iWd  340 (340)
T d1tbga_         277 SFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN  340 (340)
T ss_dssp             EECSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred             EECCCCCEEEEEECCCEEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEccCCEEEEeC
Confidence            9999999999999999999999999999999999999999999999999999999999999997


No 4  
>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00  E-value=6.5e-44  Score=315.14  Aligned_cols=288  Identities=25%  Similarity=0.414  Sum_probs=238.2

Q ss_pred             ecCccccEEEEEECCCCCeEEEeeCCCcEEEEeccCCCeeeE------------------EEeCcccceeEEEEcCCCCE
Q 019006           53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFM------------------VLKGHKNAILDLHWTTDGSQ  114 (347)
Q Consensus        53 ~~~h~~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~------------------~~~~h~~~v~~~~~~~~~~~  114 (347)
                      ..+|.+.|++|+|+|+|++||+|+ |++|++|++.... ...                  ...+|...|.+++|+|++++
T Consensus        58 ~~~H~~~V~~l~fs~dg~~lasg~-d~~i~iW~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~  135 (388)
T d1erja_          58 SLDHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGS-LVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKF  135 (388)
T ss_dssp             EEECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCC-EEEEECC-----------------CCCCBEEEEEECTTSSE
T ss_pred             eCCCCCcEEEEEECCCCCEEEEEe-CCeEEEEEecccc-eEeeecccccccccccccccccccCCCCCEEEEEECCCCCc
Confidence            347999999999999999999987 8999999985322 111                  22357778999999999999


Q ss_pred             EEEecCCCeEEEEECCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeecCCCCceEEEEEc-
Q 019006          115 IISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFS-  193 (347)
Q Consensus       115 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~-  193 (347)
                      |++|+.||.|++||...++.+..+..|...+..+.+.+.+ ..+++++.++.+++||.++..............++.+. 
T Consensus       136 l~s~~~dg~v~i~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~  214 (388)
T d1erja_         136 LATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSG-DKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSP  214 (388)
T ss_dssp             EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECS
T ss_pred             ceeccccccccccccccccccccccccccccccccccccc-ccccccccceeeeeeeccccccccccccccccccccccC
Confidence            9999999999999999999988888899999988887764 57888999999999999988777666665555566655 


Q ss_pred             CCCCeEEEEecCCcEEEEeCCCCceEEEe-------cCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcC----
Q 019006          194 DASDKIYTGGIDNDVKVWDLRKGEVSMTL-------QGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQN----  262 (347)
Q Consensus       194 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-------~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~----  262 (347)
                      +++.++++++.||.|++||.+++.....+       .+|...|.+++|+|++++|++++.|+.|++||++......    
T Consensus       215 ~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~  294 (388)
T d1erja_         215 GDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKT  294 (388)
T ss_dssp             TTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC-----------
T ss_pred             CCCCeEEEEcCCCeEEEeecccCccceeeccccccccCCCCCEEEEEECCCCCEEEEEECCCcEEEEeccCCcccccccc
Confidence            46789999999999999999988765544       4678899999999999999999999999999987543211    


Q ss_pred             ----ceeEEEeccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCCceeeEEecCCccCeeeEE------EcCCCCE
Q 019006          263 ----RCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESV------FHATEPV  332 (347)
Q Consensus       263 ----~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~------~~~~~~~  332 (347)
                          .+......|    ...+.+++|+|+|++|++|+.||.|++||+.+++++.++.+|.+.|.+++      |+|++.+
T Consensus       295 ~~~~~~~~~~~~~----~~~v~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~l~~H~~~V~~~~~~~~~~~spd~~~  370 (388)
T d1erja_         295 PNSGTCEVTYIGH----KDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNV  370 (388)
T ss_dssp             ----CEEEEEECC----SSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEE
T ss_pred             ccccceeeecccc----cceEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEeCCCCCEEEEEEecCcccCCCCCE
Confidence                112222222    35789999999999999999999999999999999999999999999887      5678999


Q ss_pred             EEEecCCCcEEeecC
Q 019006          333 IGSCSSDKQIYLGEI  347 (347)
Q Consensus       333 l~s~s~D~~i~i~~~  347 (347)
                      |+|+|.||+|+||++
T Consensus       371 l~s~s~Dg~I~iW~~  385 (388)
T d1erja_         371 FATGSGDCKARIWKY  385 (388)
T ss_dssp             EEEEETTSEEEEEEE
T ss_pred             EEEEeCCCEEEEEee
Confidence            999999999999985


No 5  
>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=100.00  E-value=1.2e-41  Score=292.44  Aligned_cols=286  Identities=16%  Similarity=0.248  Sum_probs=235.0

Q ss_pred             CccccEEEEEECCCCCeEEEeeCCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEECCCCce
Q 019006           55 GHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQ  134 (347)
Q Consensus        55 ~h~~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~  134 (347)
                      .+.+.+..++++|+|+.||.++ ++.|.+|++.. ......+.+|...|++++|+|+|++|++|+.||+|++||+.++..
T Consensus        15 ~~r~~~~~~a~~~~g~~l~~~~-~~~v~i~~~~~-~~~~~~~~~H~~~v~~~~~sp~g~~latg~~dg~i~iwd~~~~~~   92 (311)
T d1nr0a1          15 TARGTAVVLGNTPAGDKIQYCN-GTSVYTVPVGS-LTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTH   92 (311)
T ss_dssp             CCTTCCCCCEECTTSSEEEEEE-TTEEEEEETTC-SSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTC
T ss_pred             CCCCCeEEEEEcCCCCEEEEEe-CCEEEEEECCC-CceeEEEcCCCCCEEEEEEeCCCCeEeccccCceEeeeeeecccc
Confidence            3445566889999999999885 56799999964 344556789999999999999999999999999999999988764


Q ss_pred             e--eeeeccCcceeEeecCCCCCCEEEEEcC--CCceEEEeCCCCCceeecC-CCCceEEEEEcCCCCe-EEEEecCCcE
Q 019006          135 I--KKMAEHNSFVNSCCPSRRGPPLVVSGSD--DGTAKLWDMRQRGAIQTFP-DKYQITAVSFSDASDK-IYTGGIDNDV  208 (347)
Q Consensus       135 ~--~~~~~~~~~v~~~~~~~~~~~~~~s~~~--d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~-l~~~~~dg~i  208 (347)
                      .  ..+..|...|.++++++++. ++++++.  +..+++|+..+++....+. +...|.+++|+|++++ +++|+.|+.|
T Consensus        93 ~~~~~~~~~~~~v~~v~~s~d~~-~l~~~~~~~~~~~~v~~~~~~~~~~~l~~h~~~v~~v~~~~~~~~~l~sgs~d~~i  171 (311)
T d1nr0a1          93 ILKTTIPVFSGPVKDISWDSESK-RIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTV  171 (311)
T ss_dssp             CEEEEEECSSSCEEEEEECTTSC-EEEEEECCSSCSEEEEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCE
T ss_pred             ccccccccccCcccccccccccc-ccccccccccccccccccccccccccccccccccccccccccceeeeccccccccc
Confidence            3  44667888999999988764 5666654  5669999999888777665 3467999999999885 7789999999


Q ss_pred             EEEeCCCCceEEEecCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEecc---ccccccceEEEEEC
Q 019006          209 KVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGH---QHNFEKNLLKCGWS  285 (347)
Q Consensus       209 ~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~s  285 (347)
                      ++||+++++....+..|...|+++.|+|+++++++++.|+.+++||++...    ....++..   ...+...|.+++|+
T Consensus       172 ~i~d~~~~~~~~~~~~~~~~i~~v~~~p~~~~l~~~~~d~~v~~~d~~~~~----~~~~~~~~~~~~~~h~~~V~~~~~s  247 (311)
T d1nr0a1         172 AIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGT----KTGVFEDDSLKNVAHSGSVFGLTWS  247 (311)
T ss_dssp             EEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC----EEEECBCTTSSSCSSSSCEEEEEEC
T ss_pred             ccccccccccccccccccccccccccCcccccccccccccccccccccccc----ccccccccccccccccccccccccC
Confidence            999999999999999999999999999999999999999999999987532    22223221   11224579999999


Q ss_pred             CCCCEEEEeeCCCeEEEEeCCCceeeEEecCCcc-CeeeEEEcCCCCEEEEecCCCcEEeecC
Q 019006          286 PDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTG-SVNESVFHATEPVIGSCSSDKQIYLGEI  347 (347)
Q Consensus       286 ~~g~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~-~v~~~~~~~~~~~l~s~s~D~~i~i~~~  347 (347)
                      |++++|++|+.||.|+|||+.+++++..++.|.. ....+.+.+++..|++++.||.|++||+
T Consensus       248 ~~~~~l~tgs~Dg~v~iwd~~t~~~~~~l~~~~~~~~~~~~~~~~~~~l~s~s~dG~i~~wd~  310 (311)
T d1nr0a1         248 PDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNP  310 (311)
T ss_dssp             TTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEET
T ss_pred             CCCCEEEEEeCCCeEEEEECCCCcEEEEEECCCCccceEEEEEecCCEEEEEECCCEEEEEeC
Confidence            9999999999999999999999999999887754 2334445556678999999999999985


No 6  
>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=100.00  E-value=7.7e-41  Score=285.23  Aligned_cols=285  Identities=20%  Similarity=0.289  Sum_probs=218.4

Q ss_pred             eeEecCccccEEEEEECCCCCeEEEeeCCCcEEEEeccCCCeeeEEE-eCcccceeEEEEcCCCCEEEEecCCCeEEEEE
Q 019006           50 IMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVL-KGHKNAILDLHWTTDGSQIISASPDKTLRAWD  128 (347)
Q Consensus        50 ~~~~~~h~~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd  128 (347)
                      ..++.||.+.|++|+|+|++++||||+.||+|++||+... +....+ .+|...|.+++|+|++. +++++.|+.+++|+
T Consensus         5 ~~~~~GH~~~V~~l~~s~dg~~l~s~s~Dg~v~vWd~~~~-~~~~~~~~~h~~~v~~v~~~~~g~-~~~~~~d~~v~~~~   82 (299)
T d1nr0a2           5 DQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTG-ISNRVFPDVHATMITGIKTTSKGD-LFTVSWDDHLKVVP   82 (299)
T ss_dssp             EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC-CEEECSSCSCSSCEEEEEECTTSC-EEEEETTTEEEEEC
T ss_pred             ceEcCCCCCCcEEEEECCCCCEEEEEcCCCeEEEEECCCC-cEEEEEcCCCCCcEEEEEeeccce-eecccceeeEEEec
Confidence            4678999999999999999999999999999999999643 333333 57999999999999986 56677899999999


Q ss_pred             CCCCce---eeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeecCCCCceEEEEEcCCCCeEEEEecC
Q 019006          129 VETGKQ---IKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIYTGGID  205 (347)
Q Consensus       129 ~~~~~~---~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  205 (347)
                      ......   ......+...+..+++.+++. +++ ++.++.+++|+...   .........+.+++|+|+++.+++|+.|
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~-~~~-~~~~~~i~~~~~~~---~~~~~~~~~~~~~~~s~~~~~l~~g~~d  157 (299)
T d1nr0a2          83 AGGSGVDSSKAVANKLSSQPLGLAVSADGD-IAV-AACYKHIAIYSHGK---LTEVPISYNSSCVALSNDKQFVAVGGQD  157 (299)
T ss_dssp             SSSSSSCTTSCCEEECSSCEEEEEECTTSS-CEE-EEESSEEEEEETTE---EEEEECSSCEEEEEECTTSCEEEEEETT
T ss_pred             cCCccccccccccccccccccccccccccc-ccc-cccccccccccccc---cccccccccccccccccccccccccccc
Confidence            765322   112223455566677777654 344 34567899998542   2233445678899999999999999999


Q ss_pred             CcEEEEeCCCCceEE-EecCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEeccccccccceEEEEE
Q 019006          206 NDVKVWDLRKGEVSM-TLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGW  284 (347)
Q Consensus       206 g~i~iwd~~~~~~~~-~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (347)
                      |.|++||+++++... ....|...|++++|+|++++|++++.|+.|++||+...... .....+..|    ...+.+++|
T Consensus       158 g~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~-~~~~~~~~h----~~~v~~l~~  232 (299)
T d1nr0a2         158 SKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFEL-AHTNSWTFH----TAKVACVSW  232 (299)
T ss_dssp             SEEEEEEEETTEEEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEE-SCCCCCCCC----SSCEEEEEE
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-ccccccccc----ccccccccc
Confidence            999999998776443 44568889999999999999999999999999998743211 111222222    357899999


Q ss_pred             CCCCCEEEEeeCCCeEEEEeCCCcee--eEEecCCc-cCeeeEEEcCCCCEEEEecCCCcEEeecC
Q 019006          285 SPDGSKVTAGSSDRMVYIWDTTSRRI--LYKLPGHT-GSVNESVFHATEPVIGSCSSDKQIYLGEI  347 (347)
Q Consensus       285 s~~g~~l~sgs~dg~i~vwd~~~~~~--~~~~~~h~-~~v~~~~~~~~~~~l~s~s~D~~i~i~~~  347 (347)
                      +|++++|++|+.||.|++||+.++..  +.....|. ..|..+.| +++.+|+|+|.|++|++||+
T Consensus       233 s~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~l~s~s~D~~i~iWdl  297 (299)
T d1nr0a2         233 SPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIW-LNETTIVSAGQDSNIKFWNV  297 (299)
T ss_dssp             CTTSSEEEEEETTSCEEEEETTCTTSCCEEETTSSTTSCEEEEEE-EETTEEEEEETTSCEEEEEC
T ss_pred             cccccceEEEcCCCEEEEEECCCCCcceEEEecCCCCCcEEEEEE-CCCCEEEEEeCCCEEEEEec
Confidence            99999999999999999999987643  23334444 45555554 56779999999999999996


No 7  
>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}
Probab=100.00  E-value=8.6e-41  Score=294.14  Aligned_cols=281  Identities=15%  Similarity=0.233  Sum_probs=225.7

Q ss_pred             cccEEEEEECCCCCeEEEeeCCCcEEEEeccCC-CeeeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEECCCCcee
Q 019006           57 QSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGD-CKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQI  135 (347)
Q Consensus        57 ~~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~  135 (347)
                      -.+|++++|+|+|++||+|+.|+.|++|+..+. ......+++|.++|.+++|+|++++|++++.|++|++||+.++...
T Consensus         7 ~~pIt~~~~s~dg~~la~~~~~~~i~iw~~~~~~~~~~~~l~gH~~~V~~l~fsp~~~~l~s~s~D~~i~vWd~~~~~~~   86 (371)
T d1k8kc_           7 VEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWK   86 (371)
T ss_dssp             SSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEE
T ss_pred             CCCeEEEEECCCCCEEEEEeCCCEEEEEECCCCCEEEEEEecCCCCCEEEEEECCCCCEEEEEECCCeEEEEeecccccc
Confidence            367999999999999999999999999998643 2345668999999999999999999999999999999999876543


Q ss_pred             --eeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceee-----cCCCCceEEEEEcCCCCeEEEEecCCcE
Q 019006          136 --KKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQT-----FPDKYQITAVSFSDASDKIYTGGIDNDV  208 (347)
Q Consensus       136 --~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~-----~~~~~~v~~~~~~~~~~~l~~~~~dg~i  208 (347)
                        ..+..|...+.++.+.+++ ..+++|+.|+++++|++........     ..+...|.+++|+|++.+|++|+.|+.|
T Consensus        87 ~~~~~~~~~~~v~~i~~~p~~-~~l~~~s~d~~i~i~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~D~~v  165 (371)
T d1k8kc_          87 PTLVILRINRAARCVRWAPNE-KKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKC  165 (371)
T ss_dssp             EEEECCCCSSCEEEEEECTTS-SEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCE
T ss_pred             ccccccccccccccccccccc-ccceeecccCcceeeeeecccccccccccccccccccccccccccccceeccccCcEE
Confidence              3445677888888888765 5789999999999999876543322     1345689999999999999999999999


Q ss_pred             EEEeCCCC------------------ceEEEecCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEec
Q 019006          209 KVWDLRKG------------------EVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEG  270 (347)
Q Consensus       209 ~iwd~~~~------------------~~~~~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~  270 (347)
                      ++||....                  +.......|...|.+++|+|++++|++++.|+.|++||+..    ...+..+..
T Consensus       166 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~----~~~~~~~~~  241 (371)
T d1k8kc_         166 RIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADK----KMAVATLAS  241 (371)
T ss_dssp             EEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGG----TTEEEEEEC
T ss_pred             EEEeeccCccccccccccccccccceeeeeeccCccCcEEEEEeecccccccccccCCcceEEeeec----ccceeeeec
Confidence            99997542                  24456678888999999999999999999999999999874    345556665


Q ss_pred             cccccccceEEEEECCCCCEEEEeeCCCeEEEEe--CCCceeeE------------------------------------
Q 019006          271 HQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWD--TTSRRILY------------------------------------  312 (347)
Q Consensus       271 ~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd--~~~~~~~~------------------------------------  312 (347)
                      |.    ..+.+++|+|++++|++|+ |+.+++|.  ...+....                                    
T Consensus       242 ~~----~~v~s~~fs~d~~~la~g~-d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  316 (371)
T d1k8kc_         242 ET----LPLLAVTFITESSLVAAGH-DCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAA  316 (371)
T ss_dssp             SS----CCEEEEEEEETTEEEEEET-TSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC--------
T ss_pred             cc----ccceeeeecCCCCEEEEEc-CCceEEEEeeCCCceEEEeeeecCccccccccccceeeEecccceeEEeccccc
Confidence            53    4688999999999888776 56665554  32222110                                    


Q ss_pred             ---EecCCccCeeeEEEcCCC----CEEEEecCCCcEEeecC
Q 019006          313 ---KLPGHTGSVNESVFHATE----PVIGSCSSDKQIYLGEI  347 (347)
Q Consensus       313 ---~~~~h~~~v~~~~~~~~~----~~l~s~s~D~~i~i~~~  347 (347)
                         ....|.+.|+++++++..    ..++|+|.||.|+|||+
T Consensus       317 ~~~~~~~H~~~I~~i~~~~~~~~~~~~~~T~g~Dg~v~iW~~  358 (371)
T d1k8kc_         317 GAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDV  358 (371)
T ss_dssp             -CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEH
T ss_pred             cceecccccCCEEEEEEeCCCCcceEEEEEEcCCCeEEEEeC
Confidence               001488899999998765    36899999999999985


No 8  
>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=100.00  E-value=5.2e-39  Score=275.81  Aligned_cols=251  Identities=17%  Similarity=0.289  Sum_probs=213.9

Q ss_pred             CeeEecCccccEEEEEECCCCCeEEEeeCCCcEEEEeccCCCee-eEEEeCcccceeEEEEcCCCCEEEEecC--CCeEE
Q 019006           49 PIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKN-FMVLKGHKNAILDLHWTTDGSQIISASP--DKTLR  125 (347)
Q Consensus        49 ~~~~~~~h~~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~-~~~~~~h~~~v~~~~~~~~~~~l~s~~~--dg~i~  125 (347)
                      ....+.+|...|++++|+|+|++||+|+.||+|++|++...... ...+.+|...|.+++|+|++++|++++.  +..++
T Consensus        50 ~~~~~~~H~~~v~~~~~sp~g~~latg~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~v~~s~d~~~l~~~~~~~~~~~~  129 (311)
T d1nr0a1          50 DTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGH  129 (311)
T ss_dssp             CCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEE
T ss_pred             eeEEEcCCCCCEEEEEEeCCCCeEeccccCceEeeeeeeccccccccccccccCcccccccccccccccccccccccccc
Confidence            45578899999999999999999999999999999999754332 3457899999999999999999999876  45699


Q ss_pred             EEECCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeecC-CCCceEEEEEcCCCCeEEEEec
Q 019006          126 AWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFP-DKYQITAVSFSDASDKIYTGGI  204 (347)
Q Consensus       126 iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~  204 (347)
                      +|++++++....+..|...|.++++++.+..++++|+.|+.|++||+++.+....+. +...|.++.++|+++++++++.
T Consensus       130 v~~~~~~~~~~~l~~h~~~v~~v~~~~~~~~~l~sgs~d~~i~i~d~~~~~~~~~~~~~~~~i~~v~~~p~~~~l~~~~~  209 (311)
T d1nr0a1         130 VFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGG  209 (311)
T ss_dssp             EEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred             ccccccccccccccccccccccccccccceeeecccccccccccccccccccccccccccccccccccCccccccccccc
Confidence            999999988888889999999999998887789999999999999999887777664 4578999999999999999999


Q ss_pred             CCcEEEEeCCCCceEEEe-------cCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEecccccccc
Q 019006          205 DNDVKVWDLRKGEVSMTL-------QGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEK  277 (347)
Q Consensus       205 dg~i~iwd~~~~~~~~~~-------~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~  277 (347)
                      |+.|++||++++.....+       .+|...|++++|+|++++|++++.||.|++||+++    .++++.+..+.. ...
T Consensus       210 d~~v~~~d~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~tgs~Dg~v~iwd~~t----~~~~~~l~~~~~-~~~  284 (311)
T d1nr0a1         210 DGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVAT----LKVEKTIPVGTR-IED  284 (311)
T ss_dssp             TSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTT----TEEEEEEECCSS-GGG
T ss_pred             cccccccccccccccccccccccccccccccccccccCCCCCEEEEEeCCCeEEEEECCC----CcEEEEEECCCC-ccc
Confidence            999999999988766654       35788999999999999999999999999999874    456666665532 233


Q ss_pred             ceEEEEECCCCCEEEEeeCCCeEEEEeCC
Q 019006          278 NLLKCGWSPDGSKVTAGSSDRMVYIWDTT  306 (347)
Q Consensus       278 ~~~~~~~s~~g~~l~sgs~dg~i~vwd~~  306 (347)
                      .+.++.|  ++.+|++++.||.|++||++
T Consensus       285 ~~~~~~~--~~~~l~s~s~dG~i~~wd~d  311 (311)
T d1nr0a1         285 QQLGIIW--TKQALVSISANGFINFVNPE  311 (311)
T ss_dssp             CEEEEEE--CSSCEEEEETTCCEEEEETT
T ss_pred             eEEEEEe--cCCEEEEEECCCEEEEEeCC
Confidence            4455555  45689999999999999974


No 9  
>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=4.7e-38  Score=271.17  Aligned_cols=285  Identities=26%  Similarity=0.445  Sum_probs=218.3

Q ss_pred             cCeeEecCccccEEEEEECCCCCeEEEeeCCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEE
Q 019006           48 SPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAW  127 (347)
Q Consensus        48 ~~~~~~~~h~~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw  127 (347)
                      .+..+|+||.+.|.+ +++++|++||||+.||+|++||+.. .+....+.+|...|.+++|+++  +|++++.|+.+++|
T Consensus         7 ~~~~~l~GH~~~V~s-~~~~~g~~l~sgs~Dg~i~vWd~~~-~~~~~~~~~h~~~V~~v~~~~~--~l~s~s~D~~~~~~   82 (342)
T d2ovrb2           7 KSPKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVT-GKCLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVW   82 (342)
T ss_dssp             CCCEEEECSTTSCEE-EEEEETTEEEEEETTSCEEEEETTT-CCEEEECCCCSSCEEEEEEETT--EEEEEETTSCEEEE
T ss_pred             CcCEEECCcCCceEE-EEEECCCEEEEEeCCCeEEEEECCC-CCEEEEEeCCCCCEEEEEeCCC--ccccceeccccccc
Confidence            345689999999865 3566899999999999999999963 4566788999999999999874  99999999999999


Q ss_pred             ECCCCceeeeeeccCcceeEe-------------------------------------ecCCCCCCEEEEEcCCCceEEE
Q 019006          128 DVETGKQIKKMAEHNSFVNSC-------------------------------------CPSRRGPPLVVSGSDDGTAKLW  170 (347)
Q Consensus       128 d~~~~~~~~~~~~~~~~v~~~-------------------------------------~~~~~~~~~~~s~~~d~~i~iw  170 (347)
                      +............+...+...                                     .........++.++.|+.+++|
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~  162 (342)
T d2ovrb2          83 NAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVW  162 (342)
T ss_dssp             ETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEECSSCEEEEETTSCEEEE
T ss_pred             ccccccceecccccceeEeeeecccccccccccceeEEEeecccccceeeeecccccceeeccccceeeeecCCCeEEEe
Confidence            987654432222111110000                                     0000112356788899999999


Q ss_pred             eCCCCCceeecCCC-CceEEEEEcCCCCeEEEEecCCcEEEEeCCCCceEEEecCCCCceeEEEECCCCCEEEEEcCCCc
Q 019006          171 DMRQRGAIQTFPDK-YQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCK  249 (347)
Q Consensus       171 d~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~~d~~  249 (347)
                      |.+....+..+... ..+..  +.+++..+++++.||.|++||++.++....+.+|...+.+++++  +++|++++.|+.
T Consensus       163 d~~~~~~~~~~~~~~~~~~~--~~~~~~~l~s~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~s~d~~  238 (342)
T d2ovrb2         163 DPETETCLHTLQGHTNRVYS--LQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--DNILVSGNADST  238 (342)
T ss_dssp             EGGGTEEEEEECCCSSCEEE--EEECSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEE--TTEEEEEETTSC
T ss_pred             ecccceeeEEEcCccccccc--ccCCCCEEEEEeCCCeEEEeecccceeeeEecccccceeEEecC--CCEEEEEcCCCE
Confidence            98877766665433 33443  44567899999999999999999999999999999999888775  569999999999


Q ss_pred             EEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCCceeeEEec-----CCccCeeeE
Q 019006          250 LCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLP-----GHTGSVNES  324 (347)
Q Consensus       250 i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~~~~~-----~h~~~v~~~  324 (347)
                      |++||+...+    ....+..+. .....+.++.+  ++.++++|+.||.|++||+.++++++++.     +|.+.|+++
T Consensus       239 i~iwd~~~~~----~~~~~~~~~-~~~~~~~~~~~--~~~~~~s~s~Dg~i~iwd~~tg~~i~~~~~~~~~~~~~~v~~v  311 (342)
T d2ovrb2         239 VKIWDIKTGQ----CLQTLQGPN-KHQSAVTCLQF--NKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRI  311 (342)
T ss_dssp             EEEEETTTCC----EEEEECSTT-SCSSCEEEEEE--CSSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEE
T ss_pred             EEEEeccccc----ccccccccc-eeeeceeeccc--CCCeeEEEcCCCEEEEEECCCCCEEEEEecccCCCCCCCEEEE
Confidence            9999987532    233444332 12334555555  56799999999999999999999988763     677889999


Q ss_pred             EEcCCCCEEEEecCCCc----EEeecC
Q 019006          325 VFHATEPVIGSCSSDKQ----IYLGEI  347 (347)
Q Consensus       325 ~~~~~~~~l~s~s~D~~----i~i~~~  347 (347)
                      +|+|++.++|+++.||+    |++||+
T Consensus       312 ~~s~~~~~la~g~~dGt~~~~l~~~Df  338 (342)
T d2ovrb2         312 RASNTKLVCAVGSRNGTEETKLLVLDF  338 (342)
T ss_dssp             EECSSEEEEEEECSSSSSCCEEEEEEC
T ss_pred             EECCCCCEEEEEeCCCCCeeEEEEEeC
Confidence            99999999999999986    999986


No 10 
>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00  E-value=1.6e-37  Score=269.30  Aligned_cols=278  Identities=22%  Similarity=0.435  Sum_probs=209.6

Q ss_pred             eeEecCccccE-EEEEECCCCCeEEEeeCCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEE
Q 019006           50 IMLLTGHQSAV-YTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWD  128 (347)
Q Consensus        50 ~~~~~~h~~~V-~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd  128 (347)
                      ..+|+||...| .|++|  ++++||||+.||+|++||+. ..+....+.+|.+.|.+++|+|+ .+|++|+.|++|++|+
T Consensus         5 ~~tL~GH~~~vitc~~~--~~~~l~tgs~Dg~i~vWd~~-~~~~~~~l~~H~~~V~~l~~s~~-~~l~s~s~D~~i~iw~   80 (355)
T d1nexb2           5 RTTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSI-NKKFLLQLSGHDGGVWALKYAHG-GILVSGSTDRTVRVWD   80 (355)
T ss_dssp             EEEEECCSSSCEEEEEE--ETTEEEEEETTTEEEEEETT-TTEEEEEEECCSSCEEEEEEETT-TEEEEEETTCCEEEEE
T ss_pred             cEEECCcCCCcEEEEEE--CCCEEEEEeCCCeEEEEECC-CCcEEEEEECCCCCEEEEEEcCC-CEEEEEeccccccccc
Confidence            45789998875 66665  68899999999999999996 45677889999999999999985 5899999999999999


Q ss_pred             CCCCceeeeeeccCcce--eEeecCCCCCCEEEEEcCCCceEEEeC----------------------------------
Q 019006          129 VETGKQIKKMAEHNSFV--NSCCPSRRGPPLVVSGSDDGTAKLWDM----------------------------------  172 (347)
Q Consensus       129 ~~~~~~~~~~~~~~~~v--~~~~~~~~~~~~~~s~~~d~~i~iwd~----------------------------------  172 (347)
                      ....+............  ....+.+ +...+++++.|+.|++||+                                  
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (355)
T d1nexb2          81 IKKGCCTHVFEGHNSTVRCLDIVEYK-NIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRG  159 (355)
T ss_dssp             TTTTEEEEEECCCSSCEEEEEEEEET-TEEEEEEEETTSEEEEEECCC-----------CCCEEESCTTTCTTEEEEEEC
T ss_pred             cccccccccccccccccccccccccc-ccceeeeecCCCcEEEEEccCCceeccccccceeccceeccccccceeeeeee
Confidence            98876554433222111  1111111 2234455555555555554                                  


Q ss_pred             -----------------------------CCCCceeecC-CCCceEEEEEcCCCCeEEEEecCCcEEEEeCCCCceEEEe
Q 019006          173 -----------------------------RQRGAIQTFP-DKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTL  222 (347)
Q Consensus       173 -----------------------------~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~  222 (347)
                                                   ++++.+.... ....+.++.+++.+..+++++.|+.|++||++++.....+
T Consensus       160 ~~~~v~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~  239 (355)
T d1nexb2         160 HMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTL  239 (355)
T ss_dssp             CSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTCCEEEEE
T ss_pred             ccccccccccccceeeeecccceeeeeecccccceeeeeccccccccccccccceeeecccccceEEeeecccccccccc
Confidence                                         3333333222 2345678889999999999999999999999999999999


Q ss_pred             cCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEEEEeeCCCeEEE
Q 019006          223 QGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYI  302 (347)
Q Consensus       223 ~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~v  302 (347)
                      .+|...|.+++++  +++|++++.||.|++||++...      ..+..|...   ......+++++.+|++|+ ||.|++
T Consensus       240 ~~h~~~v~~~~~~--~~~l~~~~~dg~i~iwd~~~~~------~~~~~~~~~---~~~~~~~~~~~~~l~~g~-d~~i~v  307 (355)
T d1nexb2         240 QGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYS------RKFSYHHTN---LSAITTFYVSDNILVSGS-ENQFNI  307 (355)
T ss_dssp             CCCSSCCCEEEEC--SSEEEEECTTSEEEEEETTTCC------EEEEEECTT---CCCCCEEEECSSEEEEEE-TTEEEE
T ss_pred             ccccccccccccc--cceeeeeecccccccccccccc------eecccccCC---ceEEEEEcCCCCEEEEEe-CCEEEE
Confidence            9999999999986  4799999999999999987532      223333321   122235678888887775 889999


Q ss_pred             EeCCCceeeE-EecCCccCeeeEEEcCCCCEEEEecCCCcEEee
Q 019006          303 WDTTSRRILY-KLPGHTGSVNESVFHATEPVIGSCSSDKQIYLG  345 (347)
Q Consensus       303 wd~~~~~~~~-~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~i~  345 (347)
                      ||+++++++. .+.+|.+.|++++|+|+ .++++++.||+++||
T Consensus       308 wd~~tg~~~~~~~~~~~~~V~~v~~~~~-~~~~~~s~dg~~~l~  350 (355)
T d1nexb2         308 YNLRSGKLVHANILKDADQIWSVNFKGK-TLVAAVEKDGQSFLE  350 (355)
T ss_dssp             EETTTCCBCCSCTTTTCSEEEEEEEETT-EEEEEEESSSCEEEE
T ss_pred             EECCCCCEEEEEecCCCCCEEEEEEcCC-eEEEEEECCCcEEEE
Confidence            9999999885 57889999999999986 588899999996655


No 11 
>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=8.7e-37  Score=264.82  Aligned_cols=242  Identities=18%  Similarity=0.318  Sum_probs=213.8

Q ss_pred             ecCccccEEEEEECCCCCeEEEeeCCCcEEEEeccCC-CeeeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEECCC
Q 019006           53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGD-CKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVET  131 (347)
Q Consensus        53 ~~~h~~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~  131 (347)
                      ..+|.+.|.+++|+|++++|++|+.||.|++|++... ......+..|...+..++|+|++.++++++.|+.+++|++.+
T Consensus        93 ~~~h~~~I~~v~~s~dg~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~~~~~  172 (337)
T d1gxra_          93 CLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHN  172 (337)
T ss_dssp             CSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred             ecCCCCcEEEEEEcCCCCEEEEeecccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            4589999999999999999999999999999998643 234456788999999999999999999999999999999999


Q ss_pred             CceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeecCCCCceEEEEEcCCCCeEEEEecCCcEEEE
Q 019006          132 GKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVW  211 (347)
Q Consensus       132 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw  211 (347)
                      ++.......|...+.++++++.+ ..+++++.|+.+++||+++++.+..+.+...+.+++|+|+++.+++++.|+.+++|
T Consensus       173 ~~~~~~~~~~~~~v~~l~~s~~~-~~~~~~~~d~~v~i~d~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~i~  251 (337)
T d1gxra_         173 QTLVRQFQGHTDGASCIDISNDG-TKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVL  251 (337)
T ss_dssp             TEEEEEECCCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred             ccccccccccccccccccccccc-cccccccccccccccccccceeecccccccceEEEEEcccccccceeccccccccc
Confidence            98888888888889888887765 57888999999999999999888888888899999999999999999999999999


Q ss_pred             eCCCCceEEEecCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEE
Q 019006          212 DLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKV  291 (347)
Q Consensus       212 d~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l  291 (347)
                      |+++++.. ....|...|++++|+|++++|++++.|+.|++||+...    ..+..+. |    ...+.+++|+|++++|
T Consensus       252 d~~~~~~~-~~~~~~~~i~~v~~s~~g~~l~s~s~Dg~i~iwd~~~~----~~~~~~~-~----~~~v~~~~~s~d~~~l  321 (337)
T d1gxra_         252 HVNKPDKY-QLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYG----ASIFQSK-E----SSSVLSCDISVDDKYI  321 (337)
T ss_dssp             ETTSSCEE-EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC----CEEEEEE-C----SSCEEEEEECTTSCEE
T ss_pred             cccccccc-cccccccccceEEECCCCCEEEEEeCCCeEEEEECCCC----CEEEEcc-C----CCCEEEEEEeCCCCEE
Confidence            99887754 55678999999999999999999999999999998743    3333332 2    3578999999999999


Q ss_pred             EEeeCCCeEEEEeC
Q 019006          292 TAGSSDRMVYIWDT  305 (347)
Q Consensus       292 ~sgs~dg~i~vwd~  305 (347)
                      ++|+.||.|+|||+
T Consensus       322 ~t~s~D~~I~vWdl  335 (337)
T d1gxra_         322 VTGSGDKKATVYEV  335 (337)
T ss_dssp             EEEETTSCEEEEEE
T ss_pred             EEEeCCCeEEEEEE
Confidence            99999999999986


No 12 
>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00  E-value=8.9e-36  Score=257.19  Aligned_cols=284  Identities=17%  Similarity=0.244  Sum_probs=218.9

Q ss_pred             cEEEEEECCCCCeEEEeeCCCc-EEEEeccCC-CeeeEEEeCcc-cceeEEEEcC--CCCEEEEecCCCeEEEEECCCCc
Q 019006           59 AVYTMKFNPAGTVIASGSHDRD-IFLWHVHGD-CKNFMVLKGHK-NAILDLHWTT--DGSQIISASPDKTLRAWDVETGK  133 (347)
Q Consensus        59 ~V~~v~~~~~~~~l~s~~~d~~-v~~w~~~~~-~~~~~~~~~h~-~~v~~~~~~~--~~~~l~s~~~dg~i~iwd~~~~~  133 (347)
                      .+++++|+|+++.||.++.+.. |+.|+.... ......+.+|. ..|++++|+|  ++.+|++|+.||+|++||+..++
T Consensus        19 ~~t~l~~~~~~~~la~~~~~~~~i~~~~~~~~~~~~~~~~~gh~~~~v~~v~fsP~~~g~~lasgs~Dg~i~iWd~~~~~   98 (325)
T d1pgua1          19 FTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDK   98 (325)
T ss_dssp             CCCCCEEETTTTEEEEEETTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEG
T ss_pred             CeEEEEECCCCCEEEEEeCCCEEEEEEeCCCCCccceEEEeCCCCCCEEEEEEeeCCCCCEEEEEeCCCCEEEeeecCCc
Confidence            3568899999999998876553 566664322 23345677874 6799999998  56799999999999999987654


Q ss_pred             eee--------eeeccCcceeEeecCCCCCCEEEEE-cCCCceEEEeCCCCCceeecC-CCCceEEEEEcCCCCe-EEEE
Q 019006          134 QIK--------KMAEHNSFVNSCCPSRRGPPLVVSG-SDDGTAKLWDMRQRGAIQTFP-DKYQITAVSFSDASDK-IYTG  202 (347)
Q Consensus       134 ~~~--------~~~~~~~~v~~~~~~~~~~~~~~s~-~~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~-l~~~  202 (347)
                      ...        .+..+...+.++++++++..+++++ +.++.+++|+..++..+..+. +...+.+++|+|+++. ++++
T Consensus        99 ~~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~  178 (325)
T d1pgua1          99 ESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTV  178 (325)
T ss_dssp             GGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTCCEEEECCSCSSCEEEEEECSSSSCEEEEE
T ss_pred             ceeeeecccccccccccCcEEEEEECCCCCccceeeccccceEEEEeecccccceeeeecccccccccccccccceEEEe
Confidence            322        2345667788888888765444433 357789999999888887775 5678999999999876 6689


Q ss_pred             ecCCcEEEEeCCCCceEEEe---cCCCCceeEEEECCC-CCEEEEEcCCCcEEEEeCCCCCCcCceeEEEeccccccccc
Q 019006          203 GIDNDVKVWDLRKGEVSMTL---QGHQDMITGMSLSPD-GSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKN  278 (347)
Q Consensus       203 ~~dg~i~iwd~~~~~~~~~~---~~~~~~i~~v~~~~~-~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~  278 (347)
                      +.|+.+++||.+..+....+   ..|...|.+++|+|+ +.++++++.|+.|++||++.    ..++..+.+|.......
T Consensus       179 ~~d~~v~~~d~~~~~~~~~~~~~~~~~~~v~~v~~~pd~~~~l~s~~~d~~i~iwd~~~----~~~~~~l~~~~~~v~~~  254 (325)
T d1pgua1         179 GDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKS----GEFLKYIEDDQEPVQGG  254 (325)
T ss_dssp             ETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTT----CCEEEECCBTTBCCCSC
T ss_pred             ecccccccccccccccceecccccCCCCccEEeeeccccceeccccccccceeeeeecc----ccccccccccccccccc
Confidence            99999999999887766554   356678999999996 68899999999999999874    45567777776555555


Q ss_pred             eEEEEECCCCCEEEEeeCCCeEEEEeCCCceeeEEecCCccC--eeeEEEcCC-CCEEEEecCCCcEEeecC
Q 019006          279 LLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGS--VNESVFHAT-EPVIGSCSSDKQIYLGEI  347 (347)
Q Consensus       279 ~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~--v~~~~~~~~-~~~l~s~s~D~~i~i~~~  347 (347)
                      +.++.| |+|++|++++.|+.|+|||+.+++++..+..|...  +..+++.+. +..|+++|.||+|++|||
T Consensus       255 ~~s~~~-~dg~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~dg~i~vwdl  325 (325)
T d1pgua1         255 IFALSW-LDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYEL  325 (325)
T ss_dssp             EEEEEE-SSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEET
T ss_pred             eeeeec-cCCCEEEEEeCCCeEEEEECCCCCEEEEEEecCCcccCeEEEEEECCCCEEEEEECCCEEEEEEC
Confidence            566655 58999999999999999999999999887766554  344444433 347899999999999997


No 13 
>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00  E-value=2.7e-36  Score=255.41  Aligned_cols=271  Identities=19%  Similarity=0.272  Sum_probs=210.0

Q ss_pred             CcCeeEecCccccEEEEEECCCCCeEEEeeCCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEE
Q 019006           47 ESPIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRA  126 (347)
Q Consensus        47 ~~~~~~~~~h~~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~i  126 (347)
                      +.|+.+|.||..+|++|+|+|    |+||+.||+|++|++..      ...+|...|.+++++++ ..+++++.|+++++
T Consensus         3 ~~~i~~l~gH~~~I~~l~~s~----l~sgs~Dg~v~~Wd~~~------~~~~h~~~V~~~~~~~~-~~~~s~s~D~~v~~   71 (287)
T d1pgua2           3 DEVLKTISGHNKGITALTVNP----LISGSYDGRIMEWSSSS------MHQDHSNLIVSLDNSKA-QEYSSISWDDTLKV   71 (287)
T ss_dssp             EEEEEEECCCSSCEEEEETTT----TEEEETTSCEEETTTTE------EECCCCSCEEEEECCST-TCCEEEETTTEEEE
T ss_pred             cceeEEECCCCCceEEEEECc----EEEEeCCCeEEEEECCC------CCCCCCCCEEEEEecCC-CeEEEEeecccccc
Confidence            357789999999999999987    99999999999999742      24689999999999875 46899999999999


Q ss_pred             EECCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeecCCCCceEEEEEcCCCCeEEEEecCC
Q 019006          127 WDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIYTGGIDN  206 (347)
Q Consensus       127 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg  206 (347)
                      |++...+.       ...+..+...+. ..++ ....++.+.+|+..++..+..+.....+.  ++++++..+++++.++
T Consensus        72 w~~~~~~~-------~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~v~~~~~  140 (287)
T d1pgua2          72 NGITKHEF-------GSQPKVASANND-GFTA-VLTNDDDLLILQSFTGDIIKSVRLNSPGS--AVSLSQNYVAVGLEEG  140 (287)
T ss_dssp             TTEEEEEC-------SSCEEEEEECSS-SEEE-EEETTSEEEEEETTTCCEEEEEECSSCEE--EEEECSSEEEEEETTT
T ss_pred             cccccccc-------ccceeeeeeccC-CceE-EEeecccceeeeccceeeeeeccccceee--eeeccCcceeeecccc
Confidence            98754221       122233344433 2334 44566778899998888877776655554  4556677888877765


Q ss_pred             -cEEEEeCCCCceEEEec-CCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEeccccccccceEEEEE
Q 019006          207 -DVKVWDLRKGEVSMTLQ-GHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGW  284 (347)
Q Consensus       207 -~i~iwd~~~~~~~~~~~-~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (347)
                       .+++|++...+....+. .|...+++++|+|++.+|++++.||.|++||+.....   ....+..|    ...+.+++|
T Consensus       141 ~~v~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~---~~~~~~~h----~~~v~~~~~  213 (287)
T d1pgua2         141 NTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREV---KTSRWAFR----TSKINAISW  213 (287)
T ss_dssp             SCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE---EECCSCCC----SSCEEEEEE
T ss_pred             ceeeeeeccccceeeeeeeccCCceeEEEeccCccccccccccccccceeeccccc---cccccccc----ccccceeee
Confidence             79999997666555544 4677899999999999999999999999999874321   11112233    356888888


Q ss_pred             CCC----------CCEEEEeeCCCeEEEEeCCC-ceeeEEecCCccCeeeEEEcCCCCEEEEecCCCcEEeecC
Q 019006          285 SPD----------GSKVTAGSSDRMVYIWDTTS-RRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGEI  347 (347)
Q Consensus       285 s~~----------g~~l~sgs~dg~i~vwd~~~-~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~i~~~  347 (347)
                      +|+          +.+|++|+.|+.|++||+.. .+++..+.+|...|++++|+|++ .|+|+|.|++|++|++
T Consensus       214 ~p~~~~~~~~~~~~~~l~sgs~D~~i~iw~~~~~~~~~~~~~~h~~~V~~v~~~~~~-~l~s~g~D~~v~iW~i  286 (287)
T d1pgua2         214 KPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPS-TLVSSGADACIKRWNV  286 (287)
T ss_dssp             CCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEETT-EEEEEETTSCEEEEEE
T ss_pred             cccccccccccCCCCeeEeecCCCeEEEEECCCCCeEEEEeCCCCCCeEEEEECCCC-EEEEEECCCeEEEEEE
Confidence            764          56899999999999999876 56777888999999999999986 5889999999999985


No 14 
>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=7.5e-35  Score=245.47  Aligned_cols=272  Identities=26%  Similarity=0.456  Sum_probs=215.0

Q ss_pred             eEecCccccEEEEEECCCCCeEEEeeCCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEECC
Q 019006           51 MLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVE  130 (347)
Q Consensus        51 ~~~~~h~~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~  130 (347)
                      ....+|...|+|++|  +|++||||+.||+|++||+.. .+....+++|...|++++|  ++++|++|+.|+.|++|++.
T Consensus         9 ~~~~~~~~~V~c~~~--d~~~l~sgs~Dg~i~vWd~~~-~~~~~~l~~H~~~V~~v~~--~~~~l~s~s~D~~i~~~~~~   83 (293)
T d1p22a2           9 HCRSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNT-LECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVN   83 (293)
T ss_dssp             ECCCSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSS-CCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESS
T ss_pred             eccCCCCCCEEEEEE--cCCEEEEEeCCCeEEEEECCC-CcEEEEEecCCCCEeeeec--ccceeecccccccccccccc
Confidence            345688999999875  799999999999999999963 4567788999999999987  56799999999999999999


Q ss_pred             CCceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceee----cCCCCceEEEEEcCCCCeEEEEecCC
Q 019006          131 TGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQT----FPDKYQITAVSFSDASDKIYTGGIDN  206 (347)
Q Consensus       131 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~----~~~~~~v~~~~~~~~~~~l~~~~~dg  206 (347)
                      .+..................   ....++++..++.+.+||.........    ..+...+....+.  ...+++++.|+
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~~~s~d~  158 (293)
T d1p22a2          84 TGEMLNTLIHHCEAVLHLRF---NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD--DKYIVSASGDR  158 (293)
T ss_dssp             SCCEEEEECCCCSCEEEEEC---CTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEE--TTEEEEEETTS
T ss_pred             cccccccccccccccccccc---cccceeecccccceeEeeccccccccccccccccccccccceec--ccccccccCCC
Confidence            88776655544443333222   234688899999999999886653322    2344556666665  46788999999


Q ss_pred             cEEEEeCCCCceEEEecCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECC
Q 019006          207 DVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSP  286 (347)
Q Consensus       207 ~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~  286 (347)
                      .|++||+++++....+.++...+..+.++  +.++++++.|+.|++||++..    ..+.....+.    ..+.  .+++
T Consensus       159 ~i~~~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~----~~~~~~~~~~----~~v~--~~~~  226 (293)
T d1p22a2         159 TIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECG----ACLRVLEGHE----ELVR--CIRF  226 (293)
T ss_dssp             EEEEEETTTCCEEEEEECCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTC----CEEEEECCCS----SCEE--EEEC
T ss_pred             ceeeecCCCCcEEEEEcccccccccccCC--CCeEEEecCCCEEEEEecccc----eeeeeecccc----eeee--eccc
Confidence            99999999999999999998888887775  578999999999999998743    3344444432    2333  3668


Q ss_pred             CCCEEEEeeCCCeEEEEeCCC---------ceeeEEecCCccCeeeEEEcCCCCEEEEecCCCcEEeec
Q 019006          287 DGSKVTAGSSDRMVYIWDTTS---------RRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGE  346 (347)
Q Consensus       287 ~g~~l~sgs~dg~i~vwd~~~---------~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~i~~  346 (347)
                      ++.+|++|+.||.|++||+..         ...+..+.+|.+.|++++|+  +.+|+|+|.||+|+|||
T Consensus       227 ~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~H~~~V~~v~~d--~~~l~s~s~Dg~i~iWD  293 (293)
T d1p22a2         227 DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFD--EFQIVSSSHDDTILIWD  293 (293)
T ss_dssp             CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEEC--SSCEEECCSSSEEEEEC
T ss_pred             cceEEEEEcCCCEEEEEECCCCccccccCCceeeEEecCCCCCEEEEEEc--CCEEEEEecCCEEEEeC
Confidence            899999999999999999643         34567889999999999995  46899999999999998


No 15 
>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00  E-value=2.8e-35  Score=250.75  Aligned_cols=246  Identities=27%  Similarity=0.482  Sum_probs=216.1

Q ss_pred             eEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEECCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeC
Q 019006           93 FMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDM  172 (347)
Q Consensus        93 ~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~  172 (347)
                      ...++||.+.|++|+|+|++++|+||+.||+|++||+.+++.+..+..|...|..+++.+.+ .+++++..++.+.+|+.
T Consensus        10 ~~~L~GH~~~I~~l~~sp~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~h~~~V~~~~~~~~~-~~~~~~~~~~~~~~~~~   88 (317)
T d1vyhc1          10 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG-KLLASCSADMTIKLWDF   88 (317)
T ss_dssp             SCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTS-SEEEEEETTSCCCEEET
T ss_pred             cEEEcCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCEEEEEeCCCCcEEEEeeeccc-ccccccccccccccccc
Confidence            34689999999999999999999999999999999999999999999999999999988765 57889999999999998


Q ss_pred             CCCCceeecC-CCCceEEEEEcCCCCeEEEEecCCcEEEEeCCCCceEEEecCCCCceeEEEECCCCCEEEEEcCCCcEE
Q 019006          173 RQRGAIQTFP-DKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLC  251 (347)
Q Consensus       173 ~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~  251 (347)
                      ........+. +...+.++.++++++.+++++.|+.+++||+++++....+.+|...+.+++|+|++++|++++.|+.++
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~  168 (317)
T d1vyhc1          89 QGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVR  168 (317)
T ss_dssp             TSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred             cccccccccccccccceeeeccCCCceEEeeccCcceeEeecccceeeeEEccCCCcceeeecccCCCEEEEEeCCCeEE
Confidence            8776655543 456789999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEeCCCCCCcCceeEEEeccccccccceEEEEECC--------------------CCCEEEEeeCCCeEEEEeCCCceee
Q 019006          252 IWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSP--------------------DGSKVTAGSSDRMVYIWDTTSRRIL  311 (347)
Q Consensus       252 ~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~--------------------~g~~l~sgs~dg~i~vwd~~~~~~~  311 (347)
                      +|++...    .....+..+.    ..+..+.|+|                    .+.++++|+.||.|++||..+++++
T Consensus       169 ~~~~~~~----~~~~~~~~~~----~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~  240 (317)
T d1vyhc1         169 VWVVATK----ECKAELREHR----HVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCL  240 (317)
T ss_dssp             EEETTTC----CEEEEECCCS----SCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEE
T ss_pred             EEeeccc----eeeEEEecCC----CCceEEEEeeccccceeeccccceeeeeccCCceeEeccCCCEEEEEECCCCcEE
Confidence            9998753    3334444432    3345555544                    4568999999999999999999999


Q ss_pred             EEecCCccCeeeEEEcCCCCEEEEecCCCcEEeecC
Q 019006          312 YKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGEI  347 (347)
Q Consensus       312 ~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~i~~~  347 (347)
                      .++.+|...|..++|+|++++|++++.||.|++||+
T Consensus       241 ~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~  276 (317)
T d1vyhc1         241 MTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY  276 (317)
T ss_dssp             EEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECC
T ss_pred             EEEeCCCCCEEEEEECCCCCEEEEEECCCeEEEEEC
Confidence            999999999999999999999999999999999985


No 16 
>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00  E-value=1e-35  Score=255.95  Aligned_cols=296  Identities=13%  Similarity=0.172  Sum_probs=216.9

Q ss_pred             eeEecCccccEEEEEECCCCCeEEEeeCCCcEEEEeccCCCe--eeEEEeCcccceeEEEEcCCC-CEEEEecCCCeEEE
Q 019006           50 IMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCK--NFMVLKGHKNAILDLHWTTDG-SQIISASPDKTLRA  126 (347)
Q Consensus        50 ~~~~~~h~~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~--~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~dg~i~i  126 (347)
                      +.++++|++.|++|+|+|++++||+|+.||+|++|++.....  .+....+|..+|.+++|+|++ .+|++|+.||.|++
T Consensus         4 v~~~~~h~d~I~~l~fsp~~~~L~s~s~Dg~v~iwd~~~~~~~~~~~~~~~h~~~V~~v~f~~~~~~~l~sg~~d~~v~~   83 (342)
T d1yfqa_           4 VQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILK   83 (342)
T ss_dssp             EECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEE
T ss_pred             EEcCCCCCCCEEEEEEeCCCCEEEEEECCCeEEEEEccCCCcceEEEEecCCCCCEEEEEEeCCCCCEEEEcccccceee
Confidence            456789999999999999999999999999999999864322  233445799999999999864 57899999999999


Q ss_pred             EECCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceee----cC---CCCceEEEEEcCCCCeE
Q 019006          127 WDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQT----FP---DKYQITAVSFSDASDKI  199 (347)
Q Consensus       127 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~----~~---~~~~v~~~~~~~~~~~l  199 (347)
                      |++...........+............+...+++++.++++++||++.......    ..   .........+.+.+..+
T Consensus        84 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (342)
T d1yfqa_          84 VDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRL  163 (342)
T ss_dssp             ECSSSSSSEEECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSEE
T ss_pred             eecccccccccccccccccccccccccccccccccccccccceeeccccccceeeecccccccccceeeeeeeeccCCce
Confidence            999887766655555444433333344456889999999999999865433221    11   12234556677788899


Q ss_pred             EEEecCCcEEEEeCCCCceEE---EecCCCCceeEEEEC-CCCCEEEEEcCCCcEEEEeCCCCCCcCce--eEEEe---c
Q 019006          200 YTGGIDNDVKVWDLRKGEVSM---TLQGHQDMITGMSLS-PDGSYLLTNGMDCKLCIWDMRPYAPQNRC--VKILE---G  270 (347)
Q Consensus       200 ~~~~~dg~i~iwd~~~~~~~~---~~~~~~~~i~~v~~~-~~~~~l~t~~~d~~i~~wd~~~~~~~~~~--~~~~~---~  270 (347)
                      ++++.|+.|++||++......   ....+...+.+..+. .++..+++++.||.+.+|++.........  .....   .
T Consensus       164 ~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~v~~~~~~~~~~~~~~~~~~~~~~~  243 (342)
T d1yfqa_         164 IVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRL  243 (342)
T ss_dssp             EEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCC
T ss_pred             eeecCCCcEEEEecccCcccceeeeecccccceeeeEeecCCCCEEEeecCCCeEEEEEecCCcceeeccccceeeeeee
Confidence            999999999999998664322   223333445555554 46789999999999999998643221110  01111   0


Q ss_pred             --cccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCCceeeEEecCCccCeeeEEEcCCCCEEEEecCCCcEEeec
Q 019006          271 --HQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGE  346 (347)
Q Consensus       271 --~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~i~~  346 (347)
                        ........+.+++|+|++++|++|+.||.|++||+.+++.+.++..+. .+..++|+|++.++++++.|..+++|.
T Consensus       244 ~~~~~~~~~~v~~l~~sp~~~~lasg~~Dg~v~vWD~~~~~~l~~~~~~~-~~~~~~~s~~~~~l~~a~sdd~~~~~~  320 (342)
T d1yfqa_         244 NLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFN-EDSVVKIACSDNILCLATSDDTFKTNA  320 (342)
T ss_dssp             CTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCS-SSEEEEEEECSSEEEEEEECTHHHHCS
T ss_pred             ccCCCcccccceeEEecCCccEEEEECCCCEEEEEECCCCcEEEEecCCC-CCEEEEEEeCCCEEEEEEcCCcEEEee
Confidence              111223467899999999999999999999999999999998886543 345578889999999999998776664


No 17 
>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}
Probab=100.00  E-value=3.3e-35  Score=258.20  Aligned_cols=241  Identities=16%  Similarity=0.166  Sum_probs=199.5

Q ss_pred             ccceeEEEEcCCCCEEEEecCCCeEEEEECCCCc--eeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCc
Q 019006          100 KNAILDLHWTTDGSQIISASPDKTLRAWDVETGK--QIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGA  177 (347)
Q Consensus       100 ~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~  177 (347)
                      .++|++++|+|++++|++|+.||.|++||..+++  .+..+..|...|.++++++++ .++++|+.|++|++||+.++..
T Consensus         7 ~~pIt~~~~s~dg~~la~~~~~~~i~iw~~~~~~~~~~~~l~gH~~~V~~l~fsp~~-~~l~s~s~D~~i~vWd~~~~~~   85 (371)
T d1k8kc_           7 VEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDS-NRIVTCGTDRNAYVWTLKGRTW   85 (371)
T ss_dssp             SSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTT-TEEEEEETTSCEEEEEEETTEE
T ss_pred             CCCeEEEEECCCCCEEEEEeCCCEEEEEECCCCCEEEEEEecCCCCCEEEEEECCCC-CEEEEEECCCeEEEEeeccccc
Confidence            4689999999999999999999999999998765  566778899999999998865 5889999999999999986654


Q ss_pred             eee--c-CCCCceEEEEEcCCCCeEEEEecCCcEEEEeCCCCce----EEEecCCCCceeEEEECCCCCEEEEEcCCCcE
Q 019006          178 IQT--F-PDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEV----SMTLQGHQDMITGMSLSPDGSYLLTNGMDCKL  250 (347)
Q Consensus       178 ~~~--~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~----~~~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i  250 (347)
                      ...  + .+...+.++.|+|+++.+++++.|+.|++|++.....    ......|...|.+++|+|++++|++++.|+.+
T Consensus        86 ~~~~~~~~~~~~v~~i~~~p~~~~l~~~s~d~~i~i~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~D~~v  165 (371)
T d1k8kc_          86 KPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKC  165 (371)
T ss_dssp             EEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCE
T ss_pred             ccccccccccccccccccccccccceeecccCcceeeeeecccccccccccccccccccccccccccccceeccccCcEE
Confidence            322  2 3456799999999999999999999999998765432    33456788899999999999999999999999


Q ss_pred             EEEeCCCCCCcC--------------ceeEEEeccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCCceeeEEecC
Q 019006          251 CIWDMRPYAPQN--------------RCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPG  316 (347)
Q Consensus       251 ~~wd~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~~~~~~  316 (347)
                      ++||........              ........    ....+.+++|+|+|++|++++.|+.|++||+.+++.+..+.+
T Consensus       166 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~  241 (371)
T d1k8kc_         166 RIFSAYIKEVEERPAPTPWGSKMPFGELMFESSS----SCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLAS  241 (371)
T ss_dssp             EEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCC----CSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEEC
T ss_pred             EEEeeccCccccccccccccccccceeeeeeccC----ccCcEEEEEeecccccccccccCCcceEEeeecccceeeeec
Confidence            999986422111              11112222    235688999999999999999999999999999999999999


Q ss_pred             CccCeeeEEEcCCCCEEEEecCCCcEEeec
Q 019006          317 HTGSVNESVFHATEPVIGSCSSDKQIYLGE  346 (347)
Q Consensus       317 h~~~v~~~~~~~~~~~l~s~s~D~~i~i~~  346 (347)
                      |..+|.+++|+|++++|++++ |+.+++|.
T Consensus       242 ~~~~v~s~~fs~d~~~la~g~-d~~~~~~~  270 (371)
T d1k8kc_         242 ETLPLLAVTFITESSLVAAGH-DCFPVLFT  270 (371)
T ss_dssp             SSCCEEEEEEEETTEEEEEET-TSSCEEEE
T ss_pred             ccccceeeeecCCCCEEEEEc-CCceEEEE
Confidence            999999999999998887655 67666653


No 18 
>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00  E-value=5.2e-34  Score=246.02  Aligned_cols=252  Identities=19%  Similarity=0.336  Sum_probs=204.1

Q ss_pred             CeeEecCcc-ccEEEEEECC--CCCeEEEeeCCCcEEEEeccCCCe-------eeEEEeCcccceeEEEEcCCCCEEEEe
Q 019006           49 PIMLLTGHQ-SAVYTMKFNP--AGTVIASGSHDRDIFLWHVHGDCK-------NFMVLKGHKNAILDLHWTTDGSQIISA  118 (347)
Q Consensus        49 ~~~~~~~h~-~~V~~v~~~~--~~~~l~s~~~d~~v~~w~~~~~~~-------~~~~~~~h~~~v~~~~~~~~~~~l~s~  118 (347)
                      ....+.+|. ..|++++|+|  ++.+||+|+.||+|++|++.....       ....+..|..+|.+++|++++++|+++
T Consensus        54 ~~~~~~gh~~~~v~~v~fsP~~~g~~lasgs~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~  133 (325)
T d1pgua1          54 PVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVV  133 (325)
T ss_dssp             SEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEE
T ss_pred             ceEEEeCCCCCCEEEEEEeeCCCCCEEEEEeCCCCEEEeeecCCcceeeeecccccccccccCcEEEEEECCCCCcccee
Confidence            355677885 6799999998  568999999999999999853211       112346788899999999999998877


Q ss_pred             cC--CCeEEEEECCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeec----CCCCceEEEEE
Q 019006          119 SP--DKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTF----PDKYQITAVSF  192 (347)
Q Consensus       119 ~~--dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~----~~~~~v~~~~~  192 (347)
                      +.  ++.+++|+.++++.+..+..|...+.++.+.+.++.++++++.|+.+++||.+..+.....    .+...|.+++|
T Consensus       134 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~v~~v~~  213 (325)
T d1pgua1         134 GEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEF  213 (325)
T ss_dssp             ECCSSCSEEEEETTTCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEE
T ss_pred             eccccceEEEEeecccccceeeeecccccccccccccccceEEEeecccccccccccccccceecccccCCCCccEEeee
Confidence            54  6789999999999999999999999999999888888899999999999999876554433    23456999999


Q ss_pred             cCC-CCeEEEEecCCcEEEEeCCCCceEEEecCCCCceeEEEEC---CCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEE
Q 019006          193 SDA-SDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLS---PDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIL  268 (347)
Q Consensus       193 ~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~v~~~---~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~  268 (347)
                      +|+ +.++++++.|+.|++||+++++....+.+|...+.++.|+   |++++|++++.|+.|+|||++.    .++++.+
T Consensus       214 ~pd~~~~l~s~~~d~~i~iwd~~~~~~~~~l~~~~~~v~~~~~s~~~~dg~~l~s~s~D~~i~iwd~~~----~~~~~~~  289 (325)
T d1pgua1         214 SPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTT----SKCVQKW  289 (325)
T ss_dssp             CSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEESSSSEEEEEETTSEEEEEETTT----TEEEEEE
T ss_pred             ccccceeccccccccceeeeeeccccccccccccccccccceeeeeccCCCEEEEEeCCCeEEEEECCC----CCEEEEE
Confidence            997 5788899999999999999999999999888777666655   6899999999999999999874    4556666


Q ss_pred             eccccccccceEEEEECCCCCEEEEeeCCCeEEEEeC
Q 019006          269 EGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDT  305 (347)
Q Consensus       269 ~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~  305 (347)
                      ..+.+........+.+.++ .+|++||.||.|++||+
T Consensus       290 ~~~~~~~~~~~~~~~~~~~-~~l~s~s~dg~i~vwdl  325 (325)
T d1pgua1         290 TLDKQQLGNQQVGVVATGN-GRIISLSLDGTLNFYEL  325 (325)
T ss_dssp             ECCTTCGGGCEEEEEEEET-TEEEEEETTSCEEEEET
T ss_pred             EecCCcccCeEEEEEECCC-CEEEEEECCCEEEEEEC
Confidence            6665544444455555544 47899999999999985


No 19 
>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00  E-value=1.3e-33  Score=248.73  Aligned_cols=268  Identities=21%  Similarity=0.402  Sum_probs=209.2

Q ss_pred             EeeCCCcEEEEeccCCCe---eeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEECCCCceeeeeec----------
Q 019006           74 SGSHDRDIFLWHVHGDCK---NFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAE----------  140 (347)
Q Consensus        74 s~~~d~~v~~w~~~~~~~---~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~----------  140 (347)
                      .+..++...+|+......   .+....+|++.|++|+|+|+|++|++|+ |+.|++||+.+++.+..+..          
T Consensus        33 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~H~~~V~~l~fs~dg~~lasg~-d~~i~iW~~~~~~~~~~~~~~~~~~~~~~~  111 (388)
T d1erja_          33 KKQTNDYYILYNPALPREIDVELHKSLDHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPEN  111 (388)
T ss_dssp             EEECSSCEEEECTTSCCCEEEEEEEEEECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC----------
T ss_pred             ccCCCCcEEEeCCCCCcceeeeeEeeCCCCCcEEEEEECCCCCEEEEEe-CCeEEEEEecccceEeeecccccccccccc
Confidence            455667777887642211   1223347999999999999999999986 89999999998887665532          


Q ss_pred             --------cCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeecC-CCCceEEEEEcCCCCeEEEEecCCcEEEE
Q 019006          141 --------HNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFP-DKYQITAVSFSDASDKIYTGGIDNDVKVW  211 (347)
Q Consensus       141 --------~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~iw  211 (347)
                              |...|.++++++++ .++++|+.||.|++||...++.+.... +...|.++.+++++..+++++.++.+++|
T Consensus       112 ~~~~~~~~~~~~V~~l~~s~~~-~~l~s~~~dg~v~i~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~i~~~  190 (388)
T d1erja_         112 LNTSSSPSSDLYIRSVCFSPDG-KFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIW  190 (388)
T ss_dssp             -------CCCCBEEEEEECTTS-SEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred             cccccccCCCCCEEEEEECCCC-Ccceecccccccccccccccccccccccccccccccccccccccccccccceeeeee
Confidence                    34557788888764 689999999999999999887776665 56789999999999999999999999999


Q ss_pred             eCCCCceEEEecCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEecc---ccccccceEEEEECCCC
Q 019006          212 DLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGH---QHNFEKNLLKCGWSPDG  288 (347)
Q Consensus       212 d~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~s~~g  288 (347)
                      |.++.........+...+....+.+++++|++++.|+.|++||.+....    ...+...   .......+.+++|+|++
T Consensus       191 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~----~~~~~~~~~~~~~h~~~v~~l~~s~~~  266 (388)
T d1erja_         191 DLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFL----VERLDSENESGTGHKDSVYSVVFTRDG  266 (388)
T ss_dssp             ETTTTEEEEEEECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCE----EEEEC------CCCSSCEEEEEECTTS
T ss_pred             eccccccccccccccccccccccCCCCCeEEEEcCCCeEEEeecccCcc----ceeeccccccccCCCCCEEEEEECCCC
Confidence            9998887777766655444444445789999999999999999875332    2222111   11224578999999999


Q ss_pred             CEEEEeeCCCeEEEEeCCCcee------------eEEecCCccCeeeEEEcCCCCEEEEecCCCcEEeecC
Q 019006          289 SKVTAGSSDRMVYIWDTTSRRI------------LYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGEI  347 (347)
Q Consensus       289 ~~l~sgs~dg~i~vwd~~~~~~------------~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~i~~~  347 (347)
                      ++|++|+.||.|++||+.++..            ......|...|.+++|+|++++|++++.||+|++||+
T Consensus       267 ~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~sg~~dg~i~vwd~  337 (388)
T d1erja_         267 QSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDK  337 (388)
T ss_dssp             SEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEET
T ss_pred             CEEEEEECCCcEEEEeccCCccccccccccccceeeecccccceEEEEEECCCCCEEEEEeCCCEEEEEEC
Confidence            9999999999999999876432            3455678999999999999999999999999999985


No 20 
>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00  E-value=4.6e-34  Score=252.81  Aligned_cols=273  Identities=14%  Similarity=0.146  Sum_probs=190.5

Q ss_pred             eEecCccccEEEEEECCCCCeEEEeeCCCcEEEEeccCCC-----eeeEEEeCcccceeEEEE------cC-CCCEEEEe
Q 019006           51 MLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDC-----KNFMVLKGHKNAILDLHW------TT-DGSQIISA  118 (347)
Q Consensus        51 ~~~~~h~~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~-----~~~~~~~~h~~~v~~~~~------~~-~~~~l~s~  118 (347)
                      ...++|.+.|++|++++  ++|+|+|.|++|++|+.....     ........|...+..+..      +. ++..++++
T Consensus         8 ~~~~~H~~~I~~v~~~~--~~l~S~S~D~~iriWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~   85 (393)
T d1sq9a_           8 NAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATT   85 (393)
T ss_dssp             EESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEE
T ss_pred             ecCCcccCccEEEEEeC--CEEEEEECCCeEEEEECCCCCCCcccceeEeeeeccCCceEeeeEeeeccCCCCCcEEEEE
Confidence            35679999999999864  689999999999999964221     122333445544433322      11 23467899


Q ss_pred             cCCCeEEEEECCCCceeeeee----------ccCcceeEeecCCC----CCCEEEEEcCCCceEEEeCCCCCce------
Q 019006          119 SPDKTLRAWDVETGKQIKKMA----------EHNSFVNSCCPSRR----GPPLVVSGSDDGTAKLWDMRQRGAI------  178 (347)
Q Consensus       119 ~~dg~i~iwd~~~~~~~~~~~----------~~~~~v~~~~~~~~----~~~~~~s~~~d~~i~iwd~~~~~~~------  178 (347)
                      +.||.|++|++........+.          .+...+..+.+...    ...++++++.||++++||+......      
T Consensus        86 ~~dg~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~vw~~~~~~~~~~~~~~  165 (393)
T d1sq9a_          86 SFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTL  165 (393)
T ss_dssp             ETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTT
T ss_pred             eCCCcEEEEEccCCCceeeeeccccceeeeccCCCceEEEEEecCCCcccccEEEEEcCCCcEEEEEeecCCcccceeee
Confidence            999999999976443221111          11222333333222    2357889999999999997532110      


Q ss_pred             ---------ee----cCCCCceEEEEEcCCCCeEEEEecCCcEEEEeCCCCceEEE------ecCCCCceeEEEECCCCC
Q 019006          179 ---------QT----FPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMT------LQGHQDMITGMSLSPDGS  239 (347)
Q Consensus       179 ---------~~----~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~------~~~~~~~i~~v~~~~~~~  239 (347)
                               ..    ......+.+++|+|++ ++++|+.||.|++||+++++....      +.+|...|++++|+|+++
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg-~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~l~~h~~~V~~l~~spdg~  244 (393)
T d1sq9a_         166 NWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGS  244 (393)
T ss_dssp             CCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTT
T ss_pred             eeccceecccceecccCCCCcEEEEEECCCC-EEEEEeCCCcEEEEeecccccccccccccccccccceEEEcccccccc
Confidence                     00    1123357899999986 889999999999999998876654      356889999999999999


Q ss_pred             EEEEEcCCCc---EEEEeCCCCCCcCceeEEEecc---------ccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCC
Q 019006          240 YLLTNGMDCK---LCIWDMRPYAPQNRCVKILEGH---------QHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTS  307 (347)
Q Consensus       240 ~l~t~~~d~~---i~~wd~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~  307 (347)
                      +|++++.|++   |++||+....    ++..+...         ...+...|.+++|+||+++|++||.|+.|++||+.+
T Consensus       245 ~l~sgs~D~t~~~i~lwd~~~g~----~~~~l~~~~~~~~~~~~~~gH~~~V~~l~fspd~~~l~S~s~D~~v~vWd~~~  320 (393)
T d1sq9a_         245 LLAIAHDSNSFGCITLYETEFGE----RIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKT  320 (393)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCC----EEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTT
T ss_pred             eeeeecCCCCcceeeecccccce----eeeeeccccccccceeeeecccCceeeeccCCCCCeeEEECCCCEEEEEECCC
Confidence            9999998874   8999987532    22222210         011246799999999999999999999999999999


Q ss_pred             ceeeEEecCCccCee----eEEEcCCC
Q 019006          308 RRILYKLPGHTGSVN----ESVFHATE  330 (347)
Q Consensus       308 ~~~~~~~~~h~~~v~----~~~~~~~~  330 (347)
                      +++++.+++|...|.    .++|+|++
T Consensus       321 g~~~~~l~gH~~~v~~~~~~~~~~~~~  347 (393)
T d1sq9a_         321 KERITTLNMHCDDIEIEEDILAVDEHG  347 (393)
T ss_dssp             TEEEEEEECCGGGCSSGGGCCCBCTTS
T ss_pred             CCEEEEECCcCCcccCCccEEEECCCC
Confidence            999999999986653    24454443


No 21 
>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=100.00  E-value=7.1e-33  Score=235.52  Aligned_cols=241  Identities=17%  Similarity=0.216  Sum_probs=193.0

Q ss_pred             eeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEECCCCceeeeee-ccCcceeEeecCCCCCCEEEEEcCCCceEEE
Q 019006           92 NFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMA-EHNSFVNSCCPSRRGPPLVVSGSDDGTAKLW  170 (347)
Q Consensus        92 ~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iw  170 (347)
                      ....+.||.+.|++++|+|++++|++|+.||+|++||+.+++....+. .|...|.++.+.+++ . +++++.|+.+++|
T Consensus         4 ~~~~~~GH~~~V~~l~~s~dg~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~h~~~v~~v~~~~~g-~-~~~~~~d~~v~~~   81 (299)
T d1nr0a2           4 IDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKG-D-LFTVSWDDHLKVV   81 (299)
T ss_dssp             EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTS-C-EEEEETTTEEEEE
T ss_pred             cceEcCCCCCCcEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCCcEEEEEeeccc-e-eecccceeeEEEe
Confidence            346789999999999999999999999999999999999998877764 578889999888775 3 5567789999999


Q ss_pred             eCCCCCcee----ecCCCCceEEEEEcCCCCeEEEEecCCcEEEEeCCCCceEEEecCCCCceeEEEECCCCCEEEEEcC
Q 019006          171 DMRQRGAIQ----TFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGM  246 (347)
Q Consensus       171 d~~~~~~~~----~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~~  246 (347)
                      +........    .......+.++++++++..+++++ ++.+++|+..  +......  ...+.+++|+|+++++++++.
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~-~~~i~~~~~~--~~~~~~~--~~~~~~~~~s~~~~~l~~g~~  156 (299)
T d1nr0a2          82 PAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAAC-YKHIAIYSHG--KLTEVPI--SYNSSCVALSNDKQFVAVGGQ  156 (299)
T ss_dssp             CSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEE-SSEEEEEETT--EEEEEEC--SSCEEEEEECTTSCEEEEEET
T ss_pred             ccCCccccccccccccccccccccccccccccccccc-cccccccccc--ccccccc--ccccccccccccccccccccc
Confidence            986543211    112345788999999988766554 5689999854  2222222  335788999999999999999


Q ss_pred             CCcEEEEeCCCCCCcCceeE-EEeccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCCceee---EEecCCccCee
Q 019006          247 DCKLCIWDMRPYAPQNRCVK-ILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRIL---YKLPGHTGSVN  322 (347)
Q Consensus       247 d~~i~~wd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~---~~~~~h~~~v~  322 (347)
                      |+.|++||++...    ... ....|    ...+.+++|+|++++|++|+.|+.|++||+.++..+   ..+.+|...|.
T Consensus       157 dg~i~~~d~~~~~----~~~~~~~~~----~~~i~~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~h~~~v~  228 (299)
T d1nr0a2         157 DSKVHVYKLSGAS----VSEVKTIVH----PAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVA  228 (299)
T ss_dssp             TSEEEEEEEETTE----EEEEEEEEC----SSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEE
T ss_pred             ccccccccccccc----ccccccccc----cccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            9999999987421    111 11122    357899999999999999999999999999876544   35678999999


Q ss_pred             eEEEcCCCCEEEEecCCCcEEeecC
Q 019006          323 ESVFHATEPVIGSCSSDKQIYLGEI  347 (347)
Q Consensus       323 ~~~~~~~~~~l~s~s~D~~i~i~~~  347 (347)
                      +++|+|++++|++++.|+.|++||+
T Consensus       229 ~l~~s~~~~~l~sgs~dg~i~iwd~  253 (299)
T d1nr0a2         229 CVSWSPDNVRLATGSLDNSVIVWNM  253 (299)
T ss_dssp             EEEECTTSSEEEEEETTSCEEEEET
T ss_pred             cccccccccceEEEcCCCEEEEEEC
Confidence            9999999999999999999999985


No 22 
>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}
Probab=100.00  E-value=2.7e-31  Score=228.78  Aligned_cols=247  Identities=21%  Similarity=0.418  Sum_probs=208.5

Q ss_pred             eeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEECCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEe
Q 019006           92 NFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWD  171 (347)
Q Consensus        92 ~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd  171 (347)
                      ....++||.+.|++++|+|++.+|+||+.||+|++||+.+++.+..+..|...|.++++.+.+ .++++|+.|+.+++|+
T Consensus        47 ~~~tL~GH~~~I~~l~~s~~~~~l~sgs~Dg~v~iWd~~~~~~~~~~~~~~~~v~~v~~~~~~-~~l~~~~~d~~i~~~~  125 (340)
T d1tbga_          47 TRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSG-NYVACGGLDNICSIYN  125 (340)
T ss_dssp             EEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEEECSCSCEEEEEECTTS-SEEEEEETTCCEEEEE
T ss_pred             eeEEECCCCCCEEEEEECCCCCEEEEEECCCceeeeecccceeEEEEecccccEEeeEeeccc-eeeeeecccceeeccc
Confidence            446789999999999999999999999999999999999999999999999999999998765 5889999999999999


Q ss_pred             CCCCCc----eeecCCCCceEEEEEcCCCCeEEEEecCCcEEEEeCCCCceEEEecCCCCceeEEEECCCCCEEEEEcCC
Q 019006          172 MRQRGA----IQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMD  247 (347)
Q Consensus       172 ~~~~~~----~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~~d  247 (347)
                      ......    ...+.................+.....+.....++............+...+....+.+.+.++++++.|
T Consensus       126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  205 (340)
T d1tbga_         126 LKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACD  205 (340)
T ss_dssp             SSSSCSCCCEEEEECCCSSCEEEEEEEETTEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETT
T ss_pred             ccccccccccceecccccccccccccccccccccccccccccccccccccccccccccceeEeeeccccccceeEEeecC
Confidence            765432    2233333333444444456778888899999999988877777777777889999999999999999999


Q ss_pred             CcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCCceeeEEe--cCCccCeeeEE
Q 019006          248 CKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKL--PGHTGSVNESV  325 (347)
Q Consensus       248 ~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~~~~--~~h~~~v~~~~  325 (347)
                      +.|++||++.    ..+...+.+|.    ..+.+++|+|++++|++|+.||.|++||......+..+  ..|...|..++
T Consensus       206 ~~v~i~d~~~----~~~~~~~~~h~----~~i~~v~~~p~~~~l~s~s~d~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~  277 (340)
T d1tbga_         206 ASAKLWDVRE----GMCRQTFTGHE----SDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVS  277 (340)
T ss_dssp             TEEEEEETTT----TEEEEEECCCS----SCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEE
T ss_pred             ceEEEEECCC----CcEEEEEeCCC----CCeEEEEECCCCCEEEEEeCCCeEEEEeecccccccccccccccCceEEEE
Confidence            9999999874    34556666653    57899999999999999999999999999988877654  46677899999


Q ss_pred             EcCCCCEEEEecCCCcEEeecC
Q 019006          326 FHATEPVIGSCSSDKQIYLGEI  347 (347)
Q Consensus       326 ~~~~~~~l~s~s~D~~i~i~~~  347 (347)
                      |+|++++|++++.||.|++||+
T Consensus       278 ~s~~~~~l~~g~~dg~i~iwd~  299 (340)
T d1tbga_         278 FSKSGRLLLAGYDDFNCNVWDA  299 (340)
T ss_dssp             ECSSSCEEEEEETTSCEEEEET
T ss_pred             ECCCCCEEEEEECCCEEEEEEC
Confidence            9999999999999999999985


No 23 
>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00  E-value=3.4e-31  Score=234.22  Aligned_cols=246  Identities=16%  Similarity=0.206  Sum_probs=177.6

Q ss_pred             EEeCcccceeEEEEcCCCCEEEEecCCCeEEEEECCCCce------eeeeeccCcc------eeEeecCCCCCCEEEEEc
Q 019006           95 VLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQ------IKKMAEHNSF------VNSCCPSRRGPPLVVSGS  162 (347)
Q Consensus        95 ~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~------~~~~~~~~~~------v~~~~~~~~~~~~~~s~~  162 (347)
                      ..++|...|.++++++  ++++|+|.|++|++||..+.+.      ......+...      ............++++++
T Consensus         9 ~~~~H~~~I~~v~~~~--~~l~S~S~D~~iriWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~   86 (393)
T d1sq9a_           9 AGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTS   86 (393)
T ss_dssp             ESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEE
T ss_pred             cCCcccCccEEEEEeC--CEEEEEECCCeEEEEECCCCCCCcccceeEeeeeccCCceEeeeEeeeccCCCCCcEEEEEe
Confidence            4579999999999874  6999999999999999765432      1111122211      111222222234678999


Q ss_pred             CCCceEEEeCCCCCceee-----c------CCCCceEEEEEcCC-----CCeEEEEecCCcEEEEeCCCCc---------
Q 019006          163 DDGTAKLWDMRQRGAIQT-----F------PDKYQITAVSFSDA-----SDKIYTGGIDNDVKVWDLRKGE---------  217 (347)
Q Consensus       163 ~d~~i~iwd~~~~~~~~~-----~------~~~~~v~~~~~~~~-----~~~l~~~~~dg~i~iwd~~~~~---------  217 (347)
                      .||.+++|++........     .      .....+..+++.++     +.++++++.||.+++||+....         
T Consensus        87 ~dg~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~vw~~~~~~~~~~~~~~~  166 (393)
T d1sq9a_          87 FSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLN  166 (393)
T ss_dssp             TTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTC
T ss_pred             CCCcEEEEEccCCCceeeeeccccceeeeccCCCceEEEEEecCCCcccccEEEEEcCCCcEEEEEeecCCcccceeeee
Confidence            999999999764332111     0      11234666777654     3578899999999999974321         


Q ss_pred             ------e---EEEecCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEeccc--cccccceEEEEECC
Q 019006          218 ------V---SMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQ--HNFEKNLLKCGWSP  286 (347)
Q Consensus       218 ------~---~~~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~s~  286 (347)
                            .   ......+...+++++|+|++ +|++|+.|+.|++||+...    +.+..+....  ..+...|.+++|+|
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg-~lasgs~Dg~i~iwd~~~~----~~~~~~~~~~~l~~h~~~V~~l~~sp  241 (393)
T d1sq9a_         167 WSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTL----RPLYNFESQHSMINNSNSIRSVKFSP  241 (393)
T ss_dssp             CCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTT----EEEEEEECCC---CCCCCEEEEEECS
T ss_pred             eccceecccceecccCCCCcEEEEEECCCC-EEEEEeCCCcEEEEeeccc----ccccccccccccccccceEEEccccc
Confidence                  0   11122345668999999987 8999999999999999753    2333332211  12346799999999


Q ss_pred             CCCEEEEeeCCC---eEEEEeCCCceeeEEec-------------CCccCeeeEEEcCCCCEEEEecCCCcEEeecC
Q 019006          287 DGSKVTAGSSDR---MVYIWDTTSRRILYKLP-------------GHTGSVNESVFHATEPVIGSCSSDKQIYLGEI  347 (347)
Q Consensus       287 ~g~~l~sgs~dg---~i~vwd~~~~~~~~~~~-------------~h~~~v~~~~~~~~~~~l~s~s~D~~i~i~~~  347 (347)
                      ||++|++|+.|+   .|++||+.+++.+..+.             +|.+.|++++|+|++++|+|+|.|++|+|||+
T Consensus       242 dg~~l~sgs~D~t~~~i~lwd~~~g~~~~~l~~~~~~~~~~~~~~gH~~~V~~l~fspd~~~l~S~s~D~~v~vWd~  318 (393)
T d1sq9a_         242 QGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDV  318 (393)
T ss_dssp             STTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEET
T ss_pred             ccceeeeecCCCCcceeeecccccceeeeeeccccccccceeeeecccCceeeeccCCCCCeeEEECCCCEEEEEEC
Confidence            999999999987   49999999998877664             89999999999999999999999999999985


No 24 
>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.98  E-value=7.1e-30  Score=220.61  Aligned_cols=238  Identities=24%  Similarity=0.443  Sum_probs=191.5

Q ss_pred             EEEeCcccce-eEEEEcCCCCEEEEecCCCeEEEEECCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeC
Q 019006           94 MVLKGHKNAI-LDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDM  172 (347)
Q Consensus        94 ~~~~~h~~~v-~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~  172 (347)
                      ..|+||.+.| ++++|  ++++|+||+.||+|++||+.+++.+..+..|...|.++++++.  .++++|+.|++|++|+.
T Consensus         6 ~tL~GH~~~vitc~~~--~~~~l~tgs~Dg~i~vWd~~~~~~~~~l~~H~~~V~~l~~s~~--~~l~s~s~D~~i~iw~~   81 (355)
T d1nexb2           6 TTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHG--GILVSGSTDRTVRVWDI   81 (355)
T ss_dssp             EEEECCSSSCEEEEEE--ETTEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEEETT--TEEEEEETTCCEEEEET
T ss_pred             EEECCcCCCcEEEEEE--CCCEEEEEeCCCeEEEEECCCCcEEEEEECCCCCEEEEEEcCC--CEEEEEecccccccccc
Confidence            4689999886 55555  5789999999999999999999999999999999999998764  47999999999999999


Q ss_pred             CCCCceeecCCC---CceEEEEEcCCCCeEEEEecCCcEEEEeCCCCceEEE-----------------------ecCCC
Q 019006          173 RQRGAIQTFPDK---YQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMT-----------------------LQGHQ  226 (347)
Q Consensus       173 ~~~~~~~~~~~~---~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~-----------------------~~~~~  226 (347)
                      ............   .......+.+++..+++++.|+.|++||+++......                       ...|.
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (355)
T d1nexb2          82 KKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHM  161 (355)
T ss_dssp             TTTEEEEEECCCSSCEEEEEEEEETTEEEEEEEETTSEEEEEECCC-----------CCCEEESCTTTCTTEEEEEECCS
T ss_pred             cccccccccccccccccccccccccccceeeeecCCCcEEEEEccCCceeccccccceeccceeccccccceeeeeeecc
Confidence            887766554332   2345667788889999999999999999986543221                       11222


Q ss_pred             CceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCC
Q 019006          227 DMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTT  306 (347)
Q Consensus       227 ~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~  306 (347)
                      ..+  ..+.+++++++++..|+.+++||++..    +.+.....+    ...+..+.|+|++.++++++.|+.|++||..
T Consensus       162 ~~v--~~~~~~~~~~~~~~~d~~i~~~d~~~~----~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~d~~i~i~d~~  231 (355)
T d1nexb2         162 ASV--RTVSGHGNIVVSGSYDNTLIVWDVAQM----KCLYILSGH----TDRIYSTIYDHERKRCISASMDTTIRIWDLE  231 (355)
T ss_dssp             SCE--EEEEEETTEEEEEETTSCEEEEETTTT----EEEEEECCC----SSCEEEEEEETTTTEEEEEETTSCEEEEETT
T ss_pred             ccc--cccccccceeeeecccceeeeeecccc----cceeeeecc----ccccccccccccceeeecccccceEEeeecc
Confidence            222  344567899999999999999998742    333444333    3457788999999999999999999999999


Q ss_pred             CceeeEEecCCccCeeeEEEcCCCCEEEEecCCCcEEeecC
Q 019006          307 SRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGEI  347 (347)
Q Consensus       307 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~i~~~  347 (347)
                      ++..+..+.+|...|..++|++  ++|++++.||+|++||+
T Consensus       232 ~~~~~~~~~~h~~~v~~~~~~~--~~l~~~~~dg~i~iwd~  270 (355)
T d1nexb2         232 NGELMYTLQGHTALVGLLRLSD--KFLVSAAADGSIRGWDA  270 (355)
T ss_dssp             TCCEEEEECCCSSCCCEEEECS--SEEEEECTTSEEEEEET
T ss_pred             cccccccccccccccccccccc--ceeeeeecccccccccc
Confidence            9999999999999999999975  68999999999999985


No 25 
>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.97  E-value=2.2e-29  Score=216.42  Aligned_cols=241  Identities=27%  Similarity=0.468  Sum_probs=185.5

Q ss_pred             CCeeeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEECCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceE
Q 019006           89 DCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAK  168 (347)
Q Consensus        89 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~  168 (347)
                      +.+....++||.+.|.+ +++++|++|+||+.||+|+|||+.+++.+..+..|...|.++.+.+   .++++|+.|++++
T Consensus         5 ~~~~~~~l~GH~~~V~s-~~~~~g~~l~sgs~Dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~~~---~~l~s~s~D~~~~   80 (342)
T d2ovrb2           5 ELKSPKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRD---NIIISGSTDRTLK   80 (342)
T ss_dssp             CCCCCEEEECSTTSCEE-EEEEETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEET---TEEEEEETTSCEE
T ss_pred             CCCcCEEECCcCCceEE-EEEECCCEEEEEeCCCeEEEEECCCCCEEEEEeCCCCCEEEEEeCC---Cccccceeccccc
Confidence            44556789999999865 3666789999999999999999999999999999999999888864   4899999999999


Q ss_pred             EEeCCCCCceeecCCC--------------------Cc-------------------eEEEEEcCCCCeEEEEecCCcEE
Q 019006          169 LWDMRQRGAIQTFPDK--------------------YQ-------------------ITAVSFSDASDKIYTGGIDNDVK  209 (347)
Q Consensus       169 iwd~~~~~~~~~~~~~--------------------~~-------------------v~~~~~~~~~~~l~~~~~dg~i~  209 (347)
                      +|+.............                    ..                   .......+....+++++.|+.|+
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~  160 (342)
T d2ovrb2          81 VWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVK  160 (342)
T ss_dssp             EEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEECSSCEEEEETTSCEE
T ss_pred             ccccccccceecccccceeEeeeecccccccccccceeEEEeecccccceeeeecccccceeeccccceeeeecCCCeEE
Confidence            9997654322111100                    00                   01112233456788899999999


Q ss_pred             EEeCCCCceEEEecCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCC
Q 019006          210 VWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGS  289 (347)
Q Consensus       210 iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~  289 (347)
                      +||.+..+....+.+|...+..+.  +++.++++++.||.|++||++.    ..++..+..|.    ..+.++++  +++
T Consensus       161 ~~d~~~~~~~~~~~~~~~~~~~~~--~~~~~l~s~~~dg~i~~~d~~~----~~~~~~~~~~~----~~v~~~~~--~~~  228 (342)
T d2ovrb2         161 VWDPETETCLHTLQGHTNRVYSLQ--FDGIHVVSGSLDTSIRVWDVET----GNCIHTLTGHQ----SLTSGMEL--KDN  228 (342)
T ss_dssp             EEEGGGTEEEEEECCCSSCEEEEE--ECSSEEEEEETTSCEEEEETTT----CCEEEEECCCC----SCEEEEEE--ETT
T ss_pred             EeecccceeeEEEcCccccccccc--CCCCEEEEEeCCCeEEEeeccc----ceeeeEecccc----cceeEEec--CCC
Confidence            999999888889998877665554  4688999999999999999874    34455555553    34555554  567


Q ss_pred             EEEEeeCCCeEEEEeCCCceeeEEecC---CccCeeeEEEcCCCCEEEEecCCCcEEeecC
Q 019006          290 KVTAGSSDRMVYIWDTTSRRILYKLPG---HTGSVNESVFHATEPVIGSCSSDKQIYLGEI  347 (347)
Q Consensus       290 ~l~sgs~dg~i~vwd~~~~~~~~~~~~---h~~~v~~~~~~~~~~~l~s~s~D~~i~i~~~  347 (347)
                      +|++|+.||.|++||....+....+.+   |...+..+.|+  +.++++++.||+|++||+
T Consensus       229 ~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~s~s~Dg~i~iwd~  287 (342)
T d2ovrb2         229 ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDL  287 (342)
T ss_dssp             EEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEET
T ss_pred             EEEEEcCCCEEEEEecccccccccccccceeeeceeecccC--CCeeEEEcCCCEEEEEEC
Confidence            999999999999999999888777765   44556666665  569999999999999985


No 26 
>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.97  E-value=7.2e-30  Score=219.08  Aligned_cols=250  Identities=13%  Similarity=0.078  Sum_probs=186.8

Q ss_pred             eEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEECCCCcee---eeeeccCcceeEeecCCCCCCEEEEEcCCCceEE
Q 019006           93 FMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQI---KKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKL  169 (347)
Q Consensus        93 ~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~---~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~i  169 (347)
                      +...++|++.|++|+|+|++++|++|+.||+|+|||+..+...   .....|...|.++++.+.+..++++|+.|++|++
T Consensus         4 v~~~~~h~d~I~~l~fsp~~~~L~s~s~Dg~v~iwd~~~~~~~~~~~~~~~h~~~V~~v~f~~~~~~~l~sg~~d~~v~~   83 (342)
T d1yfqa_           4 VQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILK   83 (342)
T ss_dssp             EECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEE
T ss_pred             EEcCCCCCCCEEEEEEeCCCCEEEEEECCCeEEEEEccCCCcceEEEEecCCCCCEEEEEEeCCCCCEEEEcccccceee
Confidence            3456799999999999999999999999999999998765432   3334688899999998877778999999999999


Q ss_pred             EeCCCCCceeecCC--CCceEEEEEcCCCCeEEEEecCCcEEEEeCCCCceE----EEecCC--CCceeEEEECCCCCEE
Q 019006          170 WDMRQRGAIQTFPD--KYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVS----MTLQGH--QDMITGMSLSPDGSYL  241 (347)
Q Consensus       170 wd~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~----~~~~~~--~~~i~~v~~~~~~~~l  241 (347)
                      |++...........  ........+.++...+++++.++.+++||++.....    .....+  ......+.+.+.++.+
T Consensus        84 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (342)
T d1yfqa_          84 VDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRL  163 (342)
T ss_dssp             ECSSSSSSEEECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSEE
T ss_pred             eecccccccccccccccccccccccccccccccccccccccceeeccccccceeeecccccccccceeeeeeeeccCCce
Confidence            99987766555432  233445556677889999999999999998654322    222222  2234556777888999


Q ss_pred             EEEcCCCcEEEEeCCCCCCcCceeEEEeccccccccceEEEE-ECCCCCEEEEeeCCCeEEEEeCCCceee---------
Q 019006          242 LTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCG-WSPDGSKVTAGSSDRMVYIWDTTSRRIL---------  311 (347)
Q Consensus       242 ~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~s~~g~~l~sgs~dg~i~vwd~~~~~~~---------  311 (347)
                      ++++.|+.|++||++.......... ....    ........ ++.++..+++++.||.+.+|+.......         
T Consensus       164 ~~~~~d~~i~~~~~~~~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~s~dg~~~v~~~~~~~~~~~~~~~~~~  238 (342)
T d1yfqa_         164 IVGMNNSQVQWFRLPLCEDDNGTIE-ESGL----KYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAF  238 (342)
T ss_dssp             EEEESTTEEEEEESSCCTTCCCEEE-ECSC----SSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEE
T ss_pred             eeecCCCcEEEEecccCcccceeee-eccc----ccceeeeEeecCCCCEEEeecCCCeEEEEEecCCcceeecccccee
Confidence            9999999999999986543322221 1111    12233333 4567889999999999999987543211         


Q ss_pred             ------EEecCCccCeeeEEEcCCCCEEEEecCCCcEEeecC
Q 019006          312 ------YKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGEI  347 (347)
Q Consensus       312 ------~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~i~~~  347 (347)
                            ....+|...|++++|+|++++|+|||.||+|++||+
T Consensus       239 ~~~~~~~~~~~~~~~v~~l~~sp~~~~lasg~~Dg~v~vWD~  280 (342)
T d1yfqa_         239 RCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNL  280 (342)
T ss_dssp             ECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEET
T ss_pred             eeeeeccCCCcccccceeEEecCCccEEEEECCCCEEEEEEC
Confidence                  112456778999999999999999999999999985


No 27 
>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=99.97  E-value=6.9e-30  Score=221.93  Aligned_cols=281  Identities=10%  Similarity=0.055  Sum_probs=210.2

Q ss_pred             cCccccEEEEEECCCCCeEEEeeCCC--cEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEECCC
Q 019006           54 TGHQSAVYTMKFNPAGTVIASGSHDR--DIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVET  131 (347)
Q Consensus        54 ~~h~~~V~~v~~~~~~~~l~s~~~d~--~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~  131 (347)
                      .+|...|.+++|+|+|+.|++++.+.  .|++|+..+.  ....+..|...|.+++|+|++++|++++.++.+++|++.+
T Consensus        39 ~~~~~~v~~~~~spDg~~l~~~~~~~g~~v~v~d~~~~--~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~  116 (360)
T d1k32a3          39 VPEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTG--KAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLET  116 (360)
T ss_dssp             CSCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTC--CEEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred             ccCCCCEEEEEECCCCCEEEEEEcCCCCEEEEEECCCC--cEEEeeCCCceEEeeeecccccccceeccccccccccccc
Confidence            37999999999999999998776553  7899998643  4456788999999999999999999999999999999999


Q ss_pred             CceeeeeeccCcceeEeecCCCCCCEEEE---------EcCCCceEEEeCCCCCceeecCCCCceEEEEEcCCCCeEEEE
Q 019006          132 GKQIKKMAEHNSFVNSCCPSRRGPPLVVS---------GSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIYTG  202 (347)
Q Consensus       132 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~s---------~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  202 (347)
                      ++....+..+...+..+++++++..++++         +..++.+++||+.++.......+...+..+.|+|+++.|+++
T Consensus       117 ~~~~~~~~~~~~~~~~~~~spdg~~la~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~  196 (360)
T d1k32a3         117 GKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYL  196 (360)
T ss_dssp             CCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECSCSSSBEEEEEECTTSCEEEEE
T ss_pred             cceeeeeecccccccchhhccceeeeeeeccccccceeeccccceeeeccccCceeeecccccccccccccCCCCEEEEE
Confidence            98888888888888888888877544333         234556899999988777777777788999999999999999


Q ss_pred             ecCCcEEEEeCCCCce-------EEEecCCCCceeEEEECCCCCEEEEEcCCC---cEEEEeCCCCCCcCceeEEEeccc
Q 019006          203 GIDNDVKVWDLRKGEV-------SMTLQGHQDMITGMSLSPDGSYLLTNGMDC---KLCIWDMRPYAPQNRCVKILEGHQ  272 (347)
Q Consensus       203 ~~dg~i~iwd~~~~~~-------~~~~~~~~~~i~~v~~~~~~~~l~t~~~d~---~i~~wd~~~~~~~~~~~~~~~~~~  272 (347)
                      +.++.+.+||......       ...+..|...+..+.|++++..++++..+.   ..++|.+....  .. ...+..+.
T Consensus       197 s~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~  273 (360)
T d1k32a3         197 SYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDP--GD-YRMIIPLE  273 (360)
T ss_dssp             ESCCCCCEECSSSSCEECCSCBEEEEEESSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCC--BC-EEEEEECS
T ss_pred             eCCCceEcccccccceeeccccceEEEecccCccccceECCCcCcccccceeecccccceeecccCc--Cc-eeEeeecC
Confidence            9999999999765432       233444555556667778777666554432   12233332111  11 11122111


Q ss_pred             cccccceEEEEE---CCCCCEEEEeeCCCeEEEEeCCCceeeEEecCCccCeeeEEEcCCCCEEEEecCCCcEEeecC
Q 019006          273 HNFEKNLLKCGW---SPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGEI  347 (347)
Q Consensus       273 ~~~~~~~~~~~~---s~~g~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~i~~~  347 (347)
                          ..+..+.+   ++++.++++++.++.|++||+.+++..    .|.+.|..++|+||++.|++++.||.|++||+
T Consensus       274 ----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~----~~~~~v~~~~~SpDG~~l~~~~~Dg~i~v~d~  343 (360)
T d1k32a3         274 ----SSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVT----EVKNNLTDLRLSADRKTVMVRKDDGKIYTFPL  343 (360)
T ss_dssp             ----SEEEEEECCCCCSHHHHHHCCCCCEEEEEEETTTCCEE----EEEEEEEEEEECTTSCEEEEEETTSCEEEEES
T ss_pred             ----CCceEEEEEecCCCeeEEEecCCCCEEEEEECCCCeEE----EecCCcCEEEECCCCCEEEEEECCCeEEEEEC
Confidence                12233333   444557888999999999999887643    34567999999999999999999999999985


No 28 
>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.96  E-value=1.9e-26  Score=193.45  Aligned_cols=233  Identities=21%  Similarity=0.389  Sum_probs=187.0

Q ss_pred             EEeCcccceeEEEEcCCCCEEEEecCCCeEEEEECCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCC
Q 019006           95 VLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQ  174 (347)
Q Consensus        95 ~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~  174 (347)
                      ....|...|++++|  ++++|+||+.||+|+|||+.+++.+..+..|...|.++.+.   +.++++|+.|+.+++|++..
T Consensus        10 ~~~~~~~~V~c~~~--d~~~l~sgs~Dg~i~vWd~~~~~~~~~l~~H~~~V~~v~~~---~~~l~s~s~D~~i~~~~~~~   84 (293)
T d1p22a2          10 CRSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYD---ERVIITGSSDSTVRVWDVNT   84 (293)
T ss_dssp             CCCSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEECC---SSEEEEEETTSCEEEEESSS
T ss_pred             ccCCCCCCEEEEEE--cCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEeeeecc---cceeeccccccccccccccc
Confidence            34577888998765  78999999999999999999999999999999999888763   46899999999999999998


Q ss_pred             CCceeecCCCCceEEEEEcCCCCeEEEEecCCcEEEEeCCCCc---eEEEecCCCCceeEEEECCCCCEEEEEcCCCcEE
Q 019006          175 RGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGE---VSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLC  251 (347)
Q Consensus       175 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~---~~~~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~  251 (347)
                      +............. ..+.+....++++..++.+++||.....   ....+..|...+..+.+.  ...+++++.|+.++
T Consensus        85 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~~~s~d~~i~  161 (293)
T d1p22a2          85 GEMLNTLIHHCEAV-LHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIK  161 (293)
T ss_dssp             CCEEEEECCCCSCE-EEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEE
T ss_pred             cccccccccccccc-ccccccccceeecccccceeEeeccccccccccccccccccccccceec--ccccccccCCCcee
Confidence            87666555433322 3344566789999999999999987654   344566778888777765  46788999999999


Q ss_pred             EEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCCceeeEEecCCccCeeeEEEcCCCC
Q 019006          252 IWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEP  331 (347)
Q Consensus       252 ~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~  331 (347)
                      +||++..    .++..+.++.    ..+..+.+  ++.+|++|+.||.|++||+.+...+..+.+|...+..  +.+++.
T Consensus       162 ~~d~~~~----~~~~~~~~~~----~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~--~~~~~~  229 (293)
T d1p22a2         162 VWNTSTC----EFVRTLNGHK----RGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRC--IRFDNK  229 (293)
T ss_dssp             EEETTTC----CEEEEEECCS----SCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEE--EECCSS
T ss_pred             eecCCCC----cEEEEEcccc----cccccccC--CCCeEEEecCCCEEEEEecccceeeeeecccceeeee--ccccce
Confidence            9999753    3455555543    23445444  5679999999999999999999999999999988875  566788


Q ss_pred             EEEEecCCCcEEeecC
Q 019006          332 VIGSCSSDKQIYLGEI  347 (347)
Q Consensus       332 ~l~s~s~D~~i~i~~~  347 (347)
                      +|++++.||.|++||+
T Consensus       230 ~l~sg~~dg~i~iwd~  245 (293)
T d1p22a2         230 RIVSGAYDGKIKVWDL  245 (293)
T ss_dssp             EEEEEETTSCEEEEEH
T ss_pred             EEEEEcCCCEEEEEEC
Confidence            9999999999999984


No 29 
>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.96  E-value=1.5e-27  Score=201.24  Aligned_cols=229  Identities=17%  Similarity=0.214  Sum_probs=178.5

Q ss_pred             eeeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEECCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEE
Q 019006           91 KNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLW  170 (347)
Q Consensus        91 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iw  170 (347)
                      +++..+++|..+|++++|+|    |+||+.||+|++||+.++.     ..|...|..+.+.+.  ..+++++.|+++++|
T Consensus         4 ~~i~~l~gH~~~I~~l~~s~----l~sgs~Dg~v~~Wd~~~~~-----~~h~~~V~~~~~~~~--~~~~s~s~D~~v~~w   72 (287)
T d1pgua2           4 EVLKTISGHNKGITALTVNP----LISGSYDGRIMEWSSSSMH-----QDHSNLIVSLDNSKA--QEYSSISWDDTLKVN   72 (287)
T ss_dssp             EEEEEECCCSSCEEEEETTT----TEEEETTSCEEETTTTEEE-----CCCCSCEEEEECCST--TCCEEEETTTEEEET
T ss_pred             ceeEEECCCCCceEEEEECc----EEEEeCCCeEEEEECCCCC-----CCCCCCEEEEEecCC--CeEEEEeeccccccc
Confidence            56778999999999999987    9999999999999987643     467778888777654  357899999999999


Q ss_pred             eCCCCCceeecCCCCceEEEEEcCCCCeEEEEecCCcEEEEeCCCCceEEEecCCCCceeEEEECCCCCEEEEEcCCC-c
Q 019006          171 DMRQRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDC-K  249 (347)
Q Consensus       171 d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~~d~-~  249 (347)
                      ++...      .....+..+.+++++..++++ .++.+.+|+..+++....+..+. .  ..+++++++.+++++.++ .
T Consensus        73 ~~~~~------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~v~~~~~~~  142 (287)
T d1pgua2          73 GITKH------EFGSQPKVASANNDGFTAVLT-NDDDLLILQSFTGDIIKSVRLNS-P--GSAVSLSQNYVAVGLEEGNT  142 (287)
T ss_dssp             TEEEE------ECSSCEEEEEECSSSEEEEEE-TTSEEEEEETTTCCEEEEEECSS-C--EEEEEECSSEEEEEETTTSC
T ss_pred             ccccc------ccccceeeeeeccCCceEEEe-ecccceeeeccceeeeeeccccc-e--eeeeeccCcceeeeccccce
Confidence            87532      223456778888876666554 55678899998888777776443 2  345677788888887765 7


Q ss_pred             EEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCCceeeE-EecCCccCeeeEEEcC
Q 019006          250 LCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILY-KLPGHTGSVNESVFHA  328 (347)
Q Consensus       250 i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~~-~~~~h~~~v~~~~~~~  328 (347)
                      +++|++...    .....+.   ......+.+++|+|++.+|++|+.||.|++||+.+++.+. ++.+|...|.+++|+|
T Consensus       143 v~~~~~~~~----~~~~~~~---~~~~~~v~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~p  215 (287)
T d1pgua2         143 IQVFKLSDL----EVSFDLK---TPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKP  215 (287)
T ss_dssp             EEEEETTEE----EEEEECS---SCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECC
T ss_pred             eeeeecccc----ceeeeee---eccCCceeEEEeccCccccccccccccccceeecccccccccccccccccceeeecc
Confidence            999998632    1111111   1234578999999999999999999999999999987664 5789999999999987


Q ss_pred             C----------CCEEEEecCCCcEEeecC
Q 019006          329 T----------EPVIGSCSSDKQIYLGEI  347 (347)
Q Consensus       329 ~----------~~~l~s~s~D~~i~i~~~  347 (347)
                      .          +.+++|++.|++|+|||+
T Consensus       216 ~~~~~~~~~~~~~~l~sgs~D~~i~iw~~  244 (287)
T d1pgua2         216 AEKGANEEEIEEDLVATGSLDTNIFIYSV  244 (287)
T ss_dssp             CC------CCSCCEEEEEETTSCEEEEES
T ss_pred             cccccccccCCCCeeEeecCCCeEEEEEC
Confidence            5          468999999999999985


No 30 
>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}
Probab=99.95  E-value=1e-23  Score=178.02  Aligned_cols=262  Identities=16%  Similarity=0.176  Sum_probs=205.3

Q ss_pred             EEEeeCCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEE-EEecCCCeEEEEECCCCceeeeeeccCcceeEeec
Q 019006           72 IASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQI-ISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCP  150 (347)
Q Consensus        72 l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~  150 (347)
                      .++++.|++|.+||+.. .+....+... ..+..++|+|||++| ++++.++.|++||+.+++.+..+..+.. ...+.+
T Consensus         5 yV~~~~~~~v~v~D~~t-~~~~~~i~~g-~~p~~va~spdG~~l~v~~~~~~~i~v~d~~t~~~~~~~~~~~~-~~~~~~   81 (301)
T d1l0qa2           5 YIANSESDNISVIDVTS-NKVTATIPVG-SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSS-PQGVAV   81 (301)
T ss_dssp             EEEETTTTEEEEEETTT-TEEEEEEECS-SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSSS-EEEEEE
T ss_pred             EEEECCCCEEEEEECCC-CeEEEEEECC-CCceEEEEeCCCCEEEEEECCCCEEEEEECCCCceeeeeecccc-cccccc
Confidence            45678899999999864 3444455433 457899999999987 5677899999999999998888766554 456777


Q ss_pred             CCCCCCEEEEEcCCCceEEEeCCCCCceeecCCCCceEEEEEcCCCCeEEE-EecCCcEEEEeCCCCceEEEecCCCCce
Q 019006          151 SRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIYT-GGIDNDVKVWDLRKGEVSMTLQGHQDMI  229 (347)
Q Consensus       151 ~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~dg~i~iwd~~~~~~~~~~~~~~~~i  229 (347)
                      .+++..+++++..++.+.+|+...+.....+.......++.++|++..++. +..++.+.+|+..+......+..+ ..+
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  160 (301)
T d1l0qa2          82 SPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG-RSP  160 (301)
T ss_dssp             CTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC-SSE
T ss_pred             ccccccccccccccceeeecccccceeeeeccccccceEEEeecCCCeeeeeeccccceeeeeccccceeeecccC-CCc
Confidence            787777888888999999999999888888887778899999999998764 556788999999998887777654 447


Q ss_pred             eEEEECCCCCEEEEEcCC-CcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEEEEee---CCCeEEEEeC
Q 019006          230 TGMSLSPDGSYLLTNGMD-CKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGS---SDRMVYIWDT  305 (347)
Q Consensus       230 ~~v~~~~~~~~l~t~~~d-~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs---~dg~i~vwd~  305 (347)
                      ..+.++|+++++++++.+ +.+.+|+...    .........     ......++|++++..++.+.   .++.|++||+
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~-----~~~~~~~~~~~~g~~~~v~~~~~~~~~v~v~D~  231 (301)
T d1l0qa2         161 KGIAVTPDGTKVYVANFDSMSISVIDTVT----NSVIDTVKV-----EAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDT  231 (301)
T ss_dssp             EEEEECTTSSEEEEEETTTTEEEEEETTT----TEEEEEEEC-----SSEEEEEEECTTSSEEEEEEECSSCCEEEEEET
T ss_pred             eEEEeeccccceeeecccccccccccccc----eeeeecccc-----cCCcceeeccccccccccccccceeeeeeeeec
Confidence            889999999988887765 5666776553    222222222     23466788999999887654   3468999999


Q ss_pred             CCceeeEEecCCccCeeeEEEcCCCCEE-EEecCCCcEEeecC
Q 019006          306 TSRRILYKLPGHTGSVNESVFHATEPVI-GSCSSDKQIYLGEI  347 (347)
Q Consensus       306 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~s~s~D~~i~i~~~  347 (347)
                      .+++++.+++.+ ..+..++|+|+++.| ++++.|++|++||+
T Consensus       232 ~t~~~~~~~~~~-~~~~~va~spdg~~l~va~~~~~~i~v~D~  273 (301)
T d1l0qa2         232 GTNKITARIPVG-PDPAGIAVTPDGKKVYVALSFCNTVSVIDT  273 (301)
T ss_dssp             TTTEEEEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEET
T ss_pred             CCCeEEEEEcCC-CCEEEEEEeCCCCEEEEEECCCCeEEEEEC
Confidence            999998888754 467999999999865 78889999999985


No 31 
>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=99.94  E-value=5e-25  Score=196.41  Aligned_cols=294  Identities=11%  Similarity=0.043  Sum_probs=199.3

Q ss_pred             CeeEecCccccEEEEEECCCCCeEEEeeCCCcEEEEeccCCC-eeeEE---EeCcccceeEEEEcCCCCEEEE-ecCCCe
Q 019006           49 PIMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDC-KNFMV---LKGHKNAILDLHWTTDGSQIIS-ASPDKT  123 (347)
Q Consensus        49 ~~~~~~~h~~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~-~~~~~---~~~h~~~v~~~~~~~~~~~l~s-~~~dg~  123 (347)
                      .+..+..|. .+..++|+|||++|++++.|++|++||+.... .....   ..+|...+.+++|+|||+++++ +..++.
T Consensus        54 ~~~~l~~g~-~~~~vafSPDGk~l~~~~~d~~v~vwd~~t~~~~~~~~i~~~~~~~~~~~s~~~spDG~~l~v~~~~~~~  132 (426)
T d1hzua2          54 IVKVIDTGY-AVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQ  132 (426)
T ss_dssp             EEEEEECCS-SEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEESSE
T ss_pred             EEEEEeCCC-CeeEEEECCCCCEEEEEeCCCCEEEEEccCCceeEEEEEeCCCCCcceEEeeeecCCCCEEEEeecCCCe
Confidence            345666664 69999999999999999999999999996432 22222   2356677788889999998754 558899


Q ss_pred             EEEEECCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEE-----------eCCCCCc--eeecCCCCceEEE
Q 019006          124 LRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLW-----------DMRQRGA--IQTFPDKYQITAV  190 (347)
Q Consensus       124 i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iw-----------d~~~~~~--~~~~~~~~~v~~~  190 (347)
                      +++||..+++....+..+...+....+.+.+....++.+.|+...++           +......  +...+....+..+
T Consensus       133 v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~d~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  212 (426)
T d1hzua2         133 FAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLADG  212 (426)
T ss_dssp             EEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECSSSSSCEEEEEECCSSEEEE
T ss_pred             EEEEcCCccceeEEeeccCCCccceeecCCCceeEEEECCCCCEEEEecCCCCeEEEEEeccccceeeEEeccCCccEee
Confidence            99999999887776665544443333333333334444444444444           3332221  2233455668889


Q ss_pred             EEcCCCCeEEEEe-cCCcEEEEeCCCCceEEEecCC--CCceeEEEECCCCC--E-EEEEcCCCcEEEEeCCCCCC---c
Q 019006          191 SFSDASDKIYTGG-IDNDVKVWDLRKGEVSMTLQGH--QDMITGMSLSPDGS--Y-LLTNGMDCKLCIWDMRPYAP---Q  261 (347)
Q Consensus       191 ~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~--~~~i~~v~~~~~~~--~-l~t~~~d~~i~~wd~~~~~~---~  261 (347)
                      .++|++++++++. .+..+.+++..+++........  ........+...+.  . .++.+.|+.+.+|+......   .
T Consensus       213 ~~~~~g~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~~~~~~~~~~~~~~  292 (426)
T d1hzua2         213 GWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYA  292 (426)
T ss_dssp             EECTTSCEEEEEETTCSEEEEEETTTTEEEEEEECSSCCCCSCCEEEEETTTEEEEEEECTTTCEEEEEECCTTTCTTTB
T ss_pred             eECCCCcEEEeeeecccceeeeecccccEEEEeccCCcccccceeeeecCCCCceEEeccCCCceEEEeecccccccccc
Confidence            9999999888776 5567999999988877655432  22223333333322  2 22345688888988754321   2


Q ss_pred             CceeEEEeccccccccceEEEEECCCCCEEEE-------eeCCCeEEEEeCCCceeeEEe---------cCCccCeeeEE
Q 019006          262 NRCVKILEGHQHNFEKNLLKCGWSPDGSKVTA-------GSSDRMVYIWDTTSRRILYKL---------PGHTGSVNESV  325 (347)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s-------gs~dg~i~vwd~~~~~~~~~~---------~~h~~~v~~~~  325 (347)
                      .+....+.+|.    ..+..++|+|||++|++       ++.|++|+|||+.+++..+++         ..|...|..++
T Consensus       293 ~~~~~~l~g~~----~~v~~v~~sPdg~~l~v~~~~~~s~~~~~tv~vwd~~t~~~~~~~~~~~~~~~~~~~~~rv~~~~  368 (426)
T d1hzua2         293 WKKVAELQGQG----GGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPE  368 (426)
T ss_dssp             TSEEEEEECSS----SCCCCEECCTTCSEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCCEEEEE
T ss_pred             ceEeEEEecCC----CceeEEEcCCCCceEEEeecCCCCcccCCEEEEEECCCCCcCeEEeccchhcccCCCCccEEEEE
Confidence            24556666664    35778899999999994       567899999999998776554         35667799999


Q ss_pred             EcCCCCEE-EE----ecCCCcEEeecC
Q 019006          326 FHATEPVI-GS----CSSDKQIYLGEI  347 (347)
Q Consensus       326 ~~~~~~~l-~s----~s~D~~i~i~~~  347 (347)
                      |+|+++.+ ++    .+.|+.|.|||.
T Consensus       369 fSpDGk~i~vs~~~~~~~~~~i~v~D~  395 (426)
T d1hzua2         369 YNKRGDEVWFSVWNGKNDSSALVVVDD  395 (426)
T ss_dssp             ECSSSSEEEEEECCCTTSCCEEEEEET
T ss_pred             ECCCCCEEEEEEecCCCCCCeEEEEEC
Confidence            99999866 33    346899999983


No 32 
>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}
Probab=99.94  E-value=8.2e-26  Score=201.62  Aligned_cols=292  Identities=11%  Similarity=0.026  Sum_probs=195.8

Q ss_pred             eeEecCccccEEEEEECCCCCeEEEeeCCCcEEEEeccCCC-eeeEE---EeCcccceeEEEEcCCCCEE-EEecCCCeE
Q 019006           50 IMLLTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDC-KNFMV---LKGHKNAILDLHWTTDGSQI-ISASPDKTL  124 (347)
Q Consensus        50 ~~~~~~h~~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~-~~~~~---~~~h~~~v~~~~~~~~~~~l-~s~~~dg~i  124 (347)
                      +..+..| ..++.++|+|||++|++++.|+.+++||+.... .....   ..+|...+.+..|+|||++| ++++.++.+
T Consensus        55 ~~~~~~g-~~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~~~~~~~~i~~~~~~~~~~~s~~~SpDG~~l~vs~~~~~~v  133 (432)
T d1qksa2          55 KTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQY  133 (432)
T ss_dssp             EEEEECS-SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEETTEE
T ss_pred             EEEEeCC-CCeeEEEECCCCCEEEEEcCCCCEEEEEeeCCCceEEEEEecCCCCCCeEEecccCCCCCEEEEEcCCCCeE
Confidence            4456666 469999999999999999999999999985332 22222   23566667777889999986 678889999


Q ss_pred             EEEECCCCceeeeeeccC-----------cceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCce--eecCCCCceEEEE
Q 019006          125 RAWDVETGKQIKKMAEHN-----------SFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAI--QTFPDKYQITAVS  191 (347)
Q Consensus       125 ~iwd~~~~~~~~~~~~~~-----------~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~--~~~~~~~~v~~~~  191 (347)
                      ++||..+++.+..+..+.           .....+.+++++..++++...++.|.+||....+..  ..++.......+.
T Consensus       134 ~i~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~~~vs~~~~~~i~~~d~~~~~~~~~~~i~~g~~~~~~~  213 (432)
T d1qksa2         134 VIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGG  213 (432)
T ss_dssp             EEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEE
T ss_pred             EEEeCccccceeeeccCCccccceeccCCCceeEEEECCCCCEEEEEEccCCeEEEEEccCCCcceEEEEcccCccccce
Confidence            999999998877665432           223345667777777888889999999998876543  4455666788999


Q ss_pred             EcCCCCeEEEEec-CCcEEEEeCCCCceEEEecC-----CCCceeEEEECCCCCEEEEEc-CCCcEEEEeCCCCCCc---
Q 019006          192 FSDASDKIYTGGI-DNDVKVWDLRKGEVSMTLQG-----HQDMITGMSLSPDGSYLLTNG-MDCKLCIWDMRPYAPQ---  261 (347)
Q Consensus       192 ~~~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~-----~~~~i~~v~~~~~~~~l~t~~-~d~~i~~wd~~~~~~~---  261 (347)
                      |+|+++++++++. ++.+.++|.++++....+..     |........+...+...++.. .++.+.+|+.......   
T Consensus       214 ~spdg~~~~va~~~~~~v~v~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~lg~~~v~~~~~~~~~~~~~~  293 (432)
T d1qksa2         214 LDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTDPEGHPDNA  293 (432)
T ss_dssp             ECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTB
T ss_pred             ECCCCCEEEEeccccceEEEeecccceEEEEeccCccccccCcccceecCCCCceecccccCCceEEecccccccccccc
Confidence            9999998877764 55789999987766544321     222233334433333333332 3566777765432111   


Q ss_pred             CceeEEEeccccc---------------------cccceEEEEECCCCCEEEEeeCCCeEEEEeCCCceeeEEecCCccC
Q 019006          262 NRCVKILEGHQHN---------------------FEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGS  320 (347)
Q Consensus       262 ~~~~~~~~~~~~~---------------------~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~  320 (347)
                      .+....+..+...                     ......++++ ||++.|++++.|+.+++||..++.   ++..|...
T Consensus       294 ~~v~~~~~~~~g~~~~~~s~p~~~~lw~~~~~~~~~~~~~sv~v-pDg~~la~~s~d~~~k~w~~~~~~---~l~~~~~~  369 (432)
T d1qksa2         294 WKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAV-FDIKAMTGDGSDPEFKTLPIAEWA---GITEGQPR  369 (432)
T ss_dssp             TSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEE-EEGGGCCCSSSCCCEEEECHHHHH---TCCSSCCE
T ss_pred             cEEEEEEEcCCCCeEEEEecCCccceeecccCCCCCCeeeEEEE-EechhhcccccCCceEeccccccc---ccCCCCCc
Confidence            1111111111000                     0001112333 899999999999999999986654   34567788


Q ss_pred             eeeEEEcCCCCEEEEe-----cCCCcEEeec
Q 019006          321 VNESVFHATEPVIGSC-----SSDKQIYLGE  346 (347)
Q Consensus       321 v~~~~~~~~~~~l~s~-----s~D~~i~i~~  346 (347)
                      |..++|+|+|+.+..+     ..|+.|.|||
T Consensus       370 v~~~~fS~DG~~v~~S~~~~~~~~g~i~i~D  400 (432)
T d1qksa2         370 VVQGEFNKDGTEVWFSVWNGKDQESALVVVD  400 (432)
T ss_dssp             EEEEEECTTSSEEEEEEECCTTSCCEEEEEE
T ss_pred             EEEeEECCCCCEEEEEEecCCCCCCcEEEEE
Confidence            9999999999877443     2578899987


No 33 
>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=99.92  E-value=1.8e-24  Score=187.38  Aligned_cols=274  Identities=15%  Similarity=0.059  Sum_probs=197.3

Q ss_pred             EEEECC-CCCeEEEeeCCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEecCCC--eEEEEECCCCceeeee
Q 019006           62 TMKFNP-AGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDK--TLRAWDVETGKQIKKM  138 (347)
Q Consensus        62 ~v~~~~-~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~  138 (347)
                      +..||| +|+++|+++. |.|++|+..+..  ... .+|...|.+++|+|||++|++++.+.  .|++||..+++. ..+
T Consensus         7 ~~~fSP~dG~~~a~~~~-g~v~v~d~~~~~--~~~-~~~~~~v~~~~~spDg~~l~~~~~~~g~~v~v~d~~~~~~-~~~   81 (360)
T d1k32a3           7 AEDFSPLDGDLIAFVSR-GQAFIQDVSGTY--VLK-VPEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKA-EKF   81 (360)
T ss_dssp             EEEEEECGGGCEEEEET-TEEEEECTTSSB--EEE-CSCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTCCE-EEC
T ss_pred             cccccCCCCCEEEEEEC-CeEEEEECCCCc--EEE-ccCCCCEEEEEECCCCCEEEEEEcCCCCEEEEEECCCCcE-EEe
Confidence            467999 9999998875 799999986532  223 37999999999999999998776553  799999988764 456


Q ss_pred             eccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeecC-CCCceEEEEEcCCCCeEEEEe----------cCCc
Q 019006          139 AEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFP-DKYQITAVSFSDASDKIYTGG----------IDND  207 (347)
Q Consensus       139 ~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~----------~dg~  207 (347)
                      ..|...+..+++++++ .++++++.++.+++|++.++.....+. +...+.+++|+|++++|+.+.          .++.
T Consensus        82 ~~~~~~v~~~~~spdg-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~la~~~~~~~~~~~~~~~~~  160 (360)
T d1k32a3          82 EENLGNVFAMGVDRNG-KFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQA  160 (360)
T ss_dssp             CCCCCSEEEEEECTTS-SEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEE
T ss_pred             eCCCceEEeeeecccc-cccceeccccccccccccccceeeeeecccccccchhhccceeeeeeeccccccceeeccccc
Confidence            6788888889998876 578899999999999999888766654 445788899999999998543          3456


Q ss_pred             EEEEeCCCCceEEEecCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCc---CceeEEEeccccccccceEEEEE
Q 019006          208 VKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQ---NRCVKILEGHQHNFEKNLLKCGW  284 (347)
Q Consensus       208 i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~  284 (347)
                      +++||+.+++... +..+...+..++|+|+|++|++++.++.+.+||.......   ......+..+.    .....+.|
T Consensus       161 ~~v~d~~~~~~~~-~~~~~~~~~~~~~spdg~~l~~~s~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~  235 (360)
T d1k32a3         161 IHVYDMEGRKIFA-ATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIP----GSPNPTKL  235 (360)
T ss_dssp             EEEEETTTTEEEE-CSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSSCEECCSCBEEEEEESST----TCCCGGGC
T ss_pred             eeeeccccCceee-ecccccccccccccCCCCEEEEEeCCCceEcccccccceeeccccceEEEeccc----CccccceE
Confidence            8999998876544 4446677889999999999999999999999997643211   01111111111    12223456


Q ss_pred             CCCCCEEEEeeCCC-----eEEEEeCCCceeeEEecCCccCeeeEEEcCCC---CEEEEecCCCcEEeecC
Q 019006          285 SPDGSKVTAGSSDR-----MVYIWDTTSRRILYKLPGHTGSVNESVFHATE---PVIGSCSSDKQIYLGEI  347 (347)
Q Consensus       285 s~~g~~l~sgs~dg-----~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~---~~l~s~s~D~~i~i~~~  347 (347)
                      ++++..++++..+.     .+..++...+.. ..+..+.+.+..+.+.+.+   .++++++.|+.|++||+
T Consensus       236 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~  305 (360)
T d1k32a3         236 VPRSMTSEAGEYDLNDMYKRSSPINVDPGDY-RMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDV  305 (360)
T ss_dssp             CCGGGSCCCCCCCCTTGGGGCEECSCCCBCE-EEEEECSSEEEEEECCCCCSHHHHHHCCCCCEEEEEEET
T ss_pred             CCCcCcccccceeecccccceeecccCcCce-eEeeecCCCceEEEEEecCCCeeEEEecCCCCEEEEEEC
Confidence            78887777665442     244455555443 2344455555555555544   47889999999999985


No 34 
>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}
Probab=99.92  E-value=2.5e-21  Score=163.17  Aligned_cols=245  Identities=17%  Similarity=0.205  Sum_probs=191.4

Q ss_pred             ccEEEEEECCCCCeE-EEeeCCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEE-EecCCCeEEEEECCCCcee
Q 019006           58 SAVYTMKFNPAGTVI-ASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQII-SASPDKTLRAWDVETGKQI  135 (347)
Q Consensus        58 ~~V~~v~~~~~~~~l-~s~~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-s~~~dg~i~iwd~~~~~~~  135 (347)
                      ..+..++|+|+|++| ++++.++.|++||+.. .+....+..|. .+..+.|++++..++ ++..++.+.+|+..+++..
T Consensus        32 ~~p~~va~spdG~~l~v~~~~~~~i~v~d~~t-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  109 (301)
T d1l0qa2          32 SNPMGAVISPDGTKVYVANAHSNDVSIIDTAT-NNVIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVA  109 (301)
T ss_dssp             SSEEEEEECTTSSEEEEEEGGGTEEEEEETTT-TEEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEE
T ss_pred             CCceEEEEeCCCCEEEEEECCCCEEEEEECCC-Cceeeeeeccc-cccccccccccccccccccccceeeecccccceee
Confidence            457899999999977 5677899999999964 45555666665 468899999998655 5567789999999998877


Q ss_pred             eeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeecCCCCceEEEEEcCCCCeEEEEecC-CcEEEEeCC
Q 019006          136 KKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIYTGGID-NDVKVWDLR  214 (347)
Q Consensus       136 ~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-g~i~iwd~~  214 (347)
                      ..+..+. ....+.+.+++..+++++..++.+.+|+..+...+..+.....+..+.+++++..+++++.+ +.+.+|+..
T Consensus       110 ~~~~~~~-~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (301)
T d1l0qa2         110 GTVKTGK-SPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTV  188 (301)
T ss_dssp             EEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETT
T ss_pred             eeccccc-cceEEEeecCCCeeeeeeccccceeeeeccccceeeecccCCCceEEEeeccccceeeeccccccccccccc
Confidence            7765544 44567778888777888889999999999998888888777788999999999988877765 567788877


Q ss_pred             CCceEEEecCCCCceeEEEECCCCCEEEEEc---CCCcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEE
Q 019006          215 KGEVSMTLQGHQDMITGMSLSPDGSYLLTNG---MDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKV  291 (347)
Q Consensus       215 ~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~---~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l  291 (347)
                      ..+....+..+ ..+..++|+++++.++.++   .++.|.+||+...    +....+..+     ..+..++|+|||++|
T Consensus       189 ~~~~~~~~~~~-~~~~~~~~~~~g~~~~v~~~~~~~~~v~v~D~~t~----~~~~~~~~~-----~~~~~va~spdg~~l  258 (301)
T d1l0qa2         189 TNSVIDTVKVE-AAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTN----KITARIPVG-----PDPAGIAVTPDGKKV  258 (301)
T ss_dssp             TTEEEEEEECS-SEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTT----EEEEEEECC-----SSEEEEEECTTSSEE
T ss_pred             ceeeeeccccc-CCcceeeccccccccccccccceeeeeeeeecCCC----eEEEEEcCC-----CCEEEEEEeCCCCEE
Confidence            76666655543 4578899999999887654   3468999998743    334444332     347889999999987


Q ss_pred             -EEeeCCCeEEEEeCCCceeeEEec
Q 019006          292 -TAGSSDRMVYIWDTTSRRILYKLP  315 (347)
Q Consensus       292 -~sgs~dg~i~vwd~~~~~~~~~~~  315 (347)
                       ++++.|+.|++||+.+++++.+++
T Consensus       259 ~va~~~~~~i~v~D~~t~~~~~~~~  283 (301)
T d1l0qa2         259 YVALSFCNTVSVIDTATNTITATMA  283 (301)
T ss_dssp             EEEETTTTEEEEEETTTTEEEEEEE
T ss_pred             EEEECCCCeEEEEECCCCeEEEEEe
Confidence             577889999999999999988775


No 35 
>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}
Probab=99.91  E-value=2.7e-22  Score=171.76  Aligned_cols=264  Identities=12%  Similarity=0.097  Sum_probs=190.0

Q ss_pred             CeEEEeeCCCcEEEEeccCCCeeeEEEeC--cccceeEEEEcCCCCEE-EEecCCCeEEEEECCCCceeeeeeccCc---
Q 019006           70 TVIASGSHDRDIFLWHVHGDCKNFMVLKG--HKNAILDLHWTTDGSQI-ISASPDKTLRAWDVETGKQIKKMAEHNS---  143 (347)
Q Consensus        70 ~~l~s~~~d~~v~~w~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~l-~s~~~dg~i~iwd~~~~~~~~~~~~~~~---  143 (347)
                      .+|++++.|++|++||+.. .+....+..  +...+.+++|+|||+++ ++++.++.|.+||+.+++.+..+..+..   
T Consensus         2 ~~~vt~~~d~~v~v~D~~s-~~~~~~i~~~~~~~~~~~i~~spDg~~l~v~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~   80 (337)
T d1pbyb_           2 DYILAPARPDKLVVIDTEK-MAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEER   80 (337)
T ss_dssp             EEEEEEETTTEEEEEETTT-TEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEE
T ss_pred             eEEEEEcCCCEEEEEECCC-CeEEEEEECCCCCCCccEEEECCCCCEEEEEECCCCeEEEEECCCCcEEEEEecCCCccc
Confidence            4789999999999999964 344555543  34567899999999987 5667899999999999998877655432   


Q ss_pred             --ceeEeecCCCCCCEEEEEc-----------CCCceEEEeCCCCCceeecCCCCceEEEEEcCCCCeEEEEecCCcEEE
Q 019006          144 --FVNSCCPSRRGPPLVVSGS-----------DDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKV  210 (347)
Q Consensus       144 --~v~~~~~~~~~~~~~~s~~-----------~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i  210 (347)
                        ....+.+++++..++++..           .+..+.+||..++.....+.....+..++++|++.++++++.  .+.+
T Consensus        81 ~~~~~~v~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~--~~~~  158 (337)
T d1pbyb_          81 VKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGLGR--DLHV  158 (337)
T ss_dssp             EECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEESS--SEEE
T ss_pred             ccceeeEEEcCCCcEEEEeecCCcceeeeccccccceeeccccCCeEEEeccccCCceEEEEcCCCCEEEEEcC--Ccce
Confidence              2334566666654433322           467889999998888888777777889999999999998864  4788


Q ss_pred             EeCCCCceEEEecCCCCceeEEEECCCCCEE------------------------EEEcCCCcEEEEeCCCCCCcCceeE
Q 019006          211 WDLRKGEVSMTLQGHQDMITGMSLSPDGSYL------------------------LTNGMDCKLCIWDMRPYAPQNRCVK  266 (347)
Q Consensus       211 wd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l------------------------~t~~~d~~i~~wd~~~~~~~~~~~~  266 (347)
                      ||..+++....+..+... ....+.|++..+                        .....++.+.+||......   ...
T Consensus       159 ~d~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~  234 (337)
T d1pbyb_         159 MDPEAGTLVEDKPIQSWE-AETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEM---AMR  234 (337)
T ss_dssp             EETTTTEEEEEECSTTTT-TTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCE---EEE
T ss_pred             eeeecCcEEEEeecCCcc-ccceecCCcceeeccccccceeeeeeeeeeeccceeeecccCccEEEEEcCCCcE---EEE
Confidence            999988877766543221 112222322211                        1122344577777654321   111


Q ss_pred             EEeccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCCceeeEEecCCccCeeeEEEcCCCCEEEEecCCCcEEeec
Q 019006          267 ILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGE  346 (347)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~i~~  346 (347)
                      ....    .......+.++|++.+++.+  ++.|++||+.+++.+.++. +...+.+++|+|+++.|++++.|++|++||
T Consensus       235 ~~~~----~~~~~~~~~~~~~~~~~~~~--~~~i~v~d~~~~~~~~~~~-~~~~~~~~~~s~dG~~l~v~~~~~~i~v~D  307 (337)
T d1pbyb_         235 EVRI----MDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVP-LPHSYYSVNVSTDGSTVWLGGALGDLAAYD  307 (337)
T ss_dssp             EEEE----CSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEE-CSSCCCEEEECTTSCEEEEESBSSEEEEEE
T ss_pred             EecC----CCcceEEEEecccceEEEEc--cccEEEEECCCCcEEEEEc-CCCCEEEEEECCCCCEEEEEeCCCcEEEEE
Confidence            1111    13456778899999998876  4789999999999998875 567789999999999999999999999998


Q ss_pred             C
Q 019006          347 I  347 (347)
Q Consensus       347 ~  347 (347)
                      .
T Consensus       308 ~  308 (337)
T d1pbyb_         308 A  308 (337)
T ss_dssp             T
T ss_pred             C
Confidence            4


No 36 
>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=99.91  E-value=6.7e-22  Score=175.92  Aligned_cols=270  Identities=11%  Similarity=0.075  Sum_probs=186.9

Q ss_pred             CeEEEeeCCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEECCCCceee--ee---eccCcc
Q 019006           70 TVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIK--KM---AEHNSF  144 (347)
Q Consensus        70 ~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~--~~---~~~~~~  144 (347)
                      .++++.+.||+|++||+.. .+.+..+..|. .+..++|+|||++|++++.|+++++||+.+++...  .+   ..|...
T Consensus        33 ~~~V~~~~dg~v~vwD~~t-~~~~~~l~~g~-~~~~vafSPDGk~l~~~~~d~~v~vwd~~t~~~~~~~~i~~~~~~~~~  110 (426)
T d1hzua2          33 LFSVTLRDAGQIALVDGDS-KKIVKVIDTGY-AVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSV  110 (426)
T ss_dssp             EEEEEETTTTEEEEEETTT-CSEEEEEECCS-SEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEEEE
T ss_pred             EEEEEEcCCCEEEEEECCC-CcEEEEEeCCC-CeeEEEECCCCCEEEEEeCCCCEEEEEccCCceeEEEEEeCCCCCcce
Confidence            3567888999999999964 35566777764 68999999999999999999999999999886432  22   234455


Q ss_pred             eeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeecCC------------CCceEEEEEcCCCCeEEEEec-CCcEEEE
Q 019006          145 VNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPD------------KYQITAVSFSDASDKIYTGGI-DNDVKVW  211 (347)
Q Consensus       145 v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~~------------~~~v~~~~~~~~~~~l~~~~~-dg~i~iw  211 (347)
                      +.+..+++++..+++++..++.+++||............            ......+.+++++..++.... .+.+.++
T Consensus       111 ~~s~~~spDG~~l~v~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~d~~~~~~~~~~~~~i~~~  190 (426)
T d1hzua2         111 ESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLV  190 (426)
T ss_dssp             EECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEE
T ss_pred             EEeeeecCCCCEEEEeecCCCeEEEEcCCccceeEEeeccCCCccceeecCCCceeEEEECCCCCEEEEecCCCCeEEEE
Confidence            666777788876778888999999999998876654432            223455667777776665443 3556666


Q ss_pred             eCCCCce-EEEecCCCCceeEEEECCCCCEEEEEc-CCCcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCC-
Q 019006          212 DLRKGEV-SMTLQGHQDMITGMSLSPDGSYLLTNG-MDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDG-  288 (347)
Q Consensus       212 d~~~~~~-~~~~~~~~~~i~~v~~~~~~~~l~t~~-~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g-  288 (347)
                      +...... ......+...+..+.|+|++++++++. .+..+.++|....    ..+.............  ...+.+.+ 
T Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~a~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~--~~~~~~~~~  264 (426)
T d1hzua2         191 NYKDIDNLTVTSIGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDR----RLSALVDVGKTPHPGR--GANFVHPKY  264 (426)
T ss_dssp             ECSSSSSCEEEEEECCSSEEEEEECTTSCEEEEEETTCSEEEEEETTTT----EEEEEEECSSCCCCSC--CEEEEETTT
T ss_pred             EeccccceeeEEeccCCccEeeeECCCCcEEEeeeecccceeeeecccc----cEEEEeccCCcccccc--eeeeecCCC
Confidence            6554432 223334566789999999999888776 4567889988742    3333332221111111  11222222 


Q ss_pred             -CE-EEEeeCCCeEEEEeCCC-------ceeeEEecCCccCeeeEEEcCCCCEEE-------EecCCCcEEeecC
Q 019006          289 -SK-VTAGSSDRMVYIWDTTS-------RRILYKLPGHTGSVNESVFHATEPVIG-------SCSSDKQIYLGEI  347 (347)
Q Consensus       289 -~~-l~sgs~dg~i~vwd~~~-------~~~~~~~~~h~~~v~~~~~~~~~~~l~-------s~s~D~~i~i~~~  347 (347)
                       .. .++.+.|+.+.+|+...       .+....+.+|...+..++|+|++++|+       +++.|++|+|||+
T Consensus       265 ~~~~~~~~~~d~~v~~~~~~~~~~~~~~~~~~~~l~g~~~~v~~v~~sPdg~~l~v~~~~~~s~~~~~tv~vwd~  339 (426)
T d1hzua2         265 GPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDL  339 (426)
T ss_dssp             EEEEEEECTTTCEEEEEECCTTTCTTTBTSEEEEEECSSSCCCCEECCTTCSEEEECCTTCSSHHHHTCEEEEET
T ss_pred             CceEEeccCCCceEEEeeccccccccccceEeEEEecCCCceeEEEcCCCCceEEEeecCCCCcccCCEEEEEEC
Confidence             22 22345677788877644       367788999999999999999999999       5667899999985


No 37 
>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}
Probab=99.90  E-value=4.8e-22  Score=170.78  Aligned_cols=271  Identities=10%  Similarity=0.026  Sum_probs=187.6

Q ss_pred             EEECCCCCeEEEeeCCCcEEEEeccCCCeeeEEEe-CcccceeEEEEcCCCCEE-EEecCCCeEEEEECCCCceeeeeec
Q 019006           63 MKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLK-GHKNAILDLHWTTDGSQI-ISASPDKTLRAWDVETGKQIKKMAE  140 (347)
Q Consensus        63 v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l-~s~~~dg~i~iwd~~~~~~~~~~~~  140 (347)
                      ++|++++++|++++.|++|.+||+.. .+....++ .|...+.+++|+|||+++ ++++.++.|++||+.+++.+..+..
T Consensus         2 ~a~~~~~~~l~~~~~~~~v~v~D~~t-~~~~~t~~~~~~~~p~~l~~spDG~~l~v~~~~~~~v~~~d~~t~~~~~~~~~   80 (346)
T d1jmxb_           2 PALKAGHEYMIVTNYPNNLHVVDVAS-DTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANL   80 (346)
T ss_dssp             CCCCTTCEEEEEEETTTEEEEEETTT-TEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEES
T ss_pred             ccCCCCCcEEEEEcCCCEEEEEECCC-CCEEEEEEcCCCCCcceEEECCCCCEEEEEECCCCcEEEEeCccCeeeeeecc
Confidence            46889999999999999999999964 35555555 456678899999999987 5566889999999999988776643


Q ss_pred             cCc------ceeEeecCCCCCCEEEEE-----------cCCCceEEEeCCCCCceeec---CCCCceEEEEEcCCCCeEE
Q 019006          141 HNS------FVNSCCPSRRGPPLVVSG-----------SDDGTAKLWDMRQRGAIQTF---PDKYQITAVSFSDASDKIY  200 (347)
Q Consensus       141 ~~~------~v~~~~~~~~~~~~~~s~-----------~~d~~i~iwd~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~  200 (347)
                      ...      .+..+.+++++..++++.           ..+..+.+||..++.....+   .....+..+.+++++..++
T Consensus        81 ~~~~~~~~~~~~~v~~s~DG~~l~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (346)
T d1jmxb_          81 SSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYV  160 (346)
T ss_dssp             CCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSCEEE
T ss_pred             cccccccCCceEEEEEecCCCEEEEEecCCcceeeeeccCcceEEEEecccceeeeEEEeeeccCceEEEEecCCCEEEE
Confidence            321      233456677665444432           24677888988765543322   2233455566666665554


Q ss_pred             EEecCCcEEEEeCCCCceEEEecCCCCceeEEEECCCCCEEEE--------------------------EcCCCcEEEEe
Q 019006          201 TGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLT--------------------------NGMDCKLCIWD  254 (347)
Q Consensus       201 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~t--------------------------~~~d~~i~~wd  254 (347)
                      +   ++.+.+||..+++....+..+.. ...+.++|++..+..                          +..+..+.+||
T Consensus       161 ~---~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (346)
T d1jmxb_         161 A---GPDIYKMDVKTGKYTVALPLRNW-NRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVD  236 (346)
T ss_dssp             E---SSSEEEECTTTCCEEEEECSTTC-CCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEE
T ss_pred             e---CCcceEEEccCCCEEEEEecCCC-ccceEEeccccEEEEEecCCCceEeeeeeeeeccCceeEeeccCCceEEEEE
Confidence            3   24689999998888777765432 344555665544322                          22334455566


Q ss_pred             CCCCCCcCceeEEEeccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCCceeeEEecCCccCeeeEEEcCCCCEEE
Q 019006          255 MRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIG  334 (347)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~  334 (347)
                      +.....   .......+    ...+..+.+++++.+++.+.. +.|++||..+++.+..+. +...+.+++|+|++++|+
T Consensus       237 ~~~~~~---~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~-~~v~v~d~~~~~~~~~~~-~~~~~~~va~s~DG~~l~  307 (346)
T d1jmxb_         237 LKTGKT---HTQEFADL----TELYFTGLRSPKDPNQIYGVL-NRLAKYDLKQRKLIKAAN-LDHTYYCVAFDKKGDKLY  307 (346)
T ss_dssp             TTTCCE---EEEEEEEC----SSCEEEEEECSSCTTEEEEEE-SEEEEEETTTTEEEEEEE-CSSCCCEEEECSSSSCEE
T ss_pred             CCCCce---EEEEeecc----cceeEEEEEeCCCCEEEEecC-CeEEEEECCCCcEEEEEc-CCCCEEEEEEcCCCCEEE
Confidence            543211   11111111    245677888999888887765 579999999999887775 455799999999999999


Q ss_pred             EecCCCcEEeecC
Q 019006          335 SCSSDKQIYLGEI  347 (347)
Q Consensus       335 s~s~D~~i~i~~~  347 (347)
                      +++.|+.|++||.
T Consensus       308 v~~~d~~v~v~D~  320 (346)
T d1jmxb_         308 LGGTFNDLAVFNP  320 (346)
T ss_dssp             EESBSSEEEEEET
T ss_pred             EEeCCCcEEEEEC
Confidence            9999999999985


No 38 
>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}
Probab=99.89  E-value=1.5e-20  Score=167.15  Aligned_cols=265  Identities=12%  Similarity=0.036  Sum_probs=185.2

Q ss_pred             CeEEEeeCCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEECCCCce--eeee---eccCcc
Q 019006           70 TVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQ--IKKM---AEHNSF  144 (347)
Q Consensus        70 ~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~--~~~~---~~~~~~  144 (347)
                      -++++.+.||+|.+||... .+....+..| ..+..++|+|||+++++++.|+.+++||+.+++.  ...+   ..+...
T Consensus        33 ~~~v~~~d~g~v~v~D~~t-~~v~~~~~~g-~~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~~~~~~~~i~~~~~~~~~  110 (432)
T d1qksa2          33 LFSVTLRDAGQIALIDGST-YEIKTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSI  110 (432)
T ss_dssp             EEEEEETTTTEEEEEETTT-CCEEEEEECS-SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEEE
T ss_pred             EEEEEEcCCCEEEEEECCC-CcEEEEEeCC-CCeeEEEECCCCCEEEEEcCCCCEEEEEeeCCCceEEEEEecCCCCCCe
Confidence            3468899999999999864 3455666666 4689999999999999999999999999988653  2232   234455


Q ss_pred             eeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeecC------------CCCceEEEEEcCCCCeEE-EEecCCcEEEE
Q 019006          145 VNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFP------------DKYQITAVSFSDASDKIY-TGGIDNDVKVW  211 (347)
Q Consensus       145 v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~------------~~~~v~~~~~~~~~~~l~-~~~~dg~i~iw  211 (347)
                      +.+..+++++..++++++.++++++||..+++.+..+.            .......+.+++++..++ +...++.|.+|
T Consensus       111 ~~s~~~SpDG~~l~vs~~~~~~v~i~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~~~vs~~~~~~i~~~  190 (432)
T d1qksa2         111 ETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLV  190 (432)
T ss_dssp             EECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEE
T ss_pred             EEecccCCCCCEEEEEcCCCCeEEEEeCccccceeeeccCCccccceeccCCCceeEEEECCCCCEEEEEEccCCeEEEE
Confidence            55566777777677899999999999999888765542            223467788999988765 56678999999


Q ss_pred             eCCCCceEEEec-CCCCceeEEEECCCCCEEEEEcC-CCcEEEEeCCCCCCcCceeEEEecc------------------
Q 019006          212 DLRKGEVSMTLQ-GHQDMITGMSLSPDGSYLLTNGM-DCKLCIWDMRPYAPQNRCVKILEGH------------------  271 (347)
Q Consensus       212 d~~~~~~~~~~~-~~~~~i~~v~~~~~~~~l~t~~~-d~~i~~wd~~~~~~~~~~~~~~~~~------------------  271 (347)
                      |..+.+...... .+...+..++|+|+|+++++++. ++.+.++|.....    ....+...                  
T Consensus       191 d~~~~~~~~~~~i~~g~~~~~~~~spdg~~~~va~~~~~~v~v~d~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~~g  266 (432)
T d1qksa2         191 DYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGK----LVAIEDTGGQTPHPGRGANFVHPTFG  266 (432)
T ss_dssp             ETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTE----EEEEEECSSSSBCCTTCEEEEETTTE
T ss_pred             EccCCCcceEEEEcccCccccceECCCCCEEEEeccccceEEEeecccce----EEEEeccCccccccCcccceecCCCC
Confidence            998776433222 34456889999999998877765 4578888876321    11111000                  


Q ss_pred             -------------------c---cccccceEEEEECCCCCEEEEeeCCCeEEEEeCCCceeeEEecCCccCeeeEEEcCC
Q 019006          272 -------------------Q---HNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHAT  329 (347)
Q Consensus       272 -------------------~---~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~  329 (347)
                                         .   ......+....++|++..+++++.++..++|+..+      +..|......+++ |+
T Consensus       267 ~~~~~~~lg~~~v~~~~~~~~~~~~~~~~v~~~~~~~~g~~~~~~s~p~~~~lw~~~~------~~~~~~~~~sv~v-pD  339 (432)
T d1qksa2         267 PVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDAT------LNPEAEISGSVAV-FD  339 (432)
T ss_dssp             EEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECT------TCSSHHHHTCEEE-EE
T ss_pred             ceecccccCCceEEecccccccccccccEEEEEEEcCCCCeEEEEecCCccceeeccc------CCCCCCeeeEEEE-Ee
Confidence                               0   00112345556667777777777777777775443      2234444455555 88


Q ss_pred             CCEEEEecCCCcEEeecC
Q 019006          330 EPVIGSCSSDKQIYLGEI  347 (347)
Q Consensus       330 ~~~l~s~s~D~~i~i~~~  347 (347)
                      ++.+++++.|+++++|++
T Consensus       340 g~~la~~s~d~~~k~w~~  357 (432)
T d1qksa2         340 IKAMTGDGSDPEFKTLPI  357 (432)
T ss_dssp             GGGCCCSSSCCCEEEECH
T ss_pred             chhhcccccCCceEeccc
Confidence            889999999999999874


No 39 
>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}
Probab=99.87  E-value=5.3e-19  Score=150.95  Aligned_cols=277  Identities=9%  Similarity=0.173  Sum_probs=185.0

Q ss_pred             eEEEeeCCCcEEEEeccCCCe-eeEEEeCcccceeEEEEcCCCCEEEE-ecCCCeEEEEECCCCceeeeee---ccCcce
Q 019006           71 VIASGSHDRDIFLWHVHGDCK-NFMVLKGHKNAILDLHWTTDGSQIIS-ASPDKTLRAWDVETGKQIKKMA---EHNSFV  145 (347)
Q Consensus        71 ~l~s~~~d~~v~~w~~~~~~~-~~~~~~~h~~~v~~~~~~~~~~~l~s-~~~dg~i~iwd~~~~~~~~~~~---~~~~~v  145 (347)
                      .+++++.|++|++|++..... .......|...+..|+|+|||++|++ +..|+.|++|++........+.   .....+
T Consensus         6 v~v~~~~~~~I~v~~~~~~~~l~~~~~~~~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~~~~~~~~~~~~~~p   85 (333)
T d1ri6a_           6 VYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSL   85 (333)
T ss_dssp             EEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCC
T ss_pred             EEEECCCCCcEEEEEEcCCCCeEEEEEEcCCCCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCCCCcEEEeeecccCCCc
Confidence            457888999999999864322 22333467788999999999999855 4568999999997654333222   233345


Q ss_pred             eEeecCCCCCCEEEEEcCCCceEEEeCCCCCceee---cCCCCceEEEEEcCCCCeEEEEec-CCcEEEEeCCCCceEEE
Q 019006          146 NSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQT---FPDKYQITAVSFSDASDKIYTGGI-DNDVKVWDLRKGEVSMT  221 (347)
Q Consensus       146 ~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~~~~~~  221 (347)
                      ..+++++++..++++...++.+.+|+.........   ..+...+.++.++|+++.++.++. +..|.+|+.........
T Consensus        86 ~~l~~spDg~~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~d~~~~~~~~~~~~~i~~~~~~~~~~~~~  165 (333)
T d1ri6a_          86 THISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVA  165 (333)
T ss_dssp             SEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEE
T ss_pred             eEEEEcCCCCEEeecccCCCceeeeccccccceecccccCCCccceEEEeeecceeeeccccccceeeEEEeccCCccee
Confidence            56788888776666666788999998765543322   234456788899999998887764 45699999866432221


Q ss_pred             ------ecCCCCceeEEEECCCCCEEEEEc-CCCcEEEEeCCCCCCcCceeEEEecccc--ccccceEEEEECCCCCEEE
Q 019006          222 ------LQGHQDMITGMSLSPDGSYLLTNG-MDCKLCIWDMRPYAPQNRCVKILEGHQH--NFEKNLLKCGWSPDGSKVT  292 (347)
Q Consensus       222 ------~~~~~~~i~~v~~~~~~~~l~t~~-~d~~i~~wd~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~s~~g~~l~  292 (347)
                            ..........++|++++.+++... ..+...+|+...................  ........+++++++++++
T Consensus       166 ~~~~~~~~~~g~~p~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~~~  245 (333)
T d1ri6a_         166 QDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLY  245 (333)
T ss_dssp             EEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEE
T ss_pred             eeceeeeeecCCCccEEEEeccceeEEeeccccCceEEEeecccccceeeeeeeeeeecCCCccccceeEEEecccCcee
Confidence                  122334567899999998877654 5567888887543322222222221111  1123456778999999776


Q ss_pred             E-eeCCCeEEEEeCCCceeeEEe---cCCccCeeeEEEcCCCCEEEEec-CCCcEEeecC
Q 019006          293 A-GSSDRMVYIWDTTSRRILYKL---PGHTGSVNESVFHATEPVIGSCS-SDKQIYLGEI  347 (347)
Q Consensus       293 s-gs~dg~i~vwd~~~~~~~~~~---~~h~~~v~~~~~~~~~~~l~s~s-~D~~i~i~~~  347 (347)
                      . +..++.+.+|+........++   ..+...+..++|+|++++|+.++ .+++|.+|++
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~spDGk~l~va~~~~~~v~v~~i  305 (333)
T d1ri6a_         246 ACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEI  305 (333)
T ss_dssp             EEETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSSEEEEECTTTCEEEEEEE
T ss_pred             eecccCCeEEEEEEcCCCCEEEEEEEeCCCCCeeEEEEeCCCCEEEEEECCCCeEEEEEE
Confidence            5 456788999987654433222   23445678999999999776655 5688999853


No 40 
>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}
Probab=99.85  E-value=3.6e-18  Score=148.38  Aligned_cols=285  Identities=8%  Similarity=-0.017  Sum_probs=186.8

Q ss_pred             ecCccccEEEEEECCCCCeEEEe-----eCCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEec--------
Q 019006           53 LTGHQSAVYTMKFNPAGTVIASG-----SHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISAS--------  119 (347)
Q Consensus        53 ~~~h~~~V~~v~~~~~~~~l~s~-----~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~--------  119 (347)
                      ..++.+++..++++|+|+.++..     +.++.|.+||... .+....+..+..  ..++|+|||++|++++        
T Consensus        16 ~~~~~~p~~~~a~spdg~~~~~~~~~~~~~~~~v~v~D~~t-g~~~~~~~~~~~--~~~a~SpDG~~l~va~~~~~~~~~   92 (373)
T d2madh_          16 AGAADGPTNDEAPGADGRRSYINLPAHHSAIIQQWVLDAGS-GSILGHVNGGFL--PNPVAAHSGSEFALASTSFSRIAK   92 (373)
T ss_pred             cccCCCCccccccCCCCCEEEEEcccccCCCceEEEEECCC-CCEEEEEeCCCC--ccEEEcCCCCEEEEEeecCCcccc
Confidence            34688899999999999988764     2345688888753 344555655544  3789999999998875        


Q ss_pred             --CCCeEEEEECCCCceeeeeeccCcceeE-------eecCCCCCCEEE-EEcCCCceEEEeCCCCCceeecCCCCceEE
Q 019006          120 --PDKTLRAWDVETGKQIKKMAEHNSFVNS-------CCPSRRGPPLVV-SGSDDGTAKLWDMRQRGAIQTFPDKYQITA  189 (347)
Q Consensus       120 --~dg~i~iwd~~~~~~~~~~~~~~~~v~~-------~~~~~~~~~~~~-s~~~d~~i~iwd~~~~~~~~~~~~~~~v~~  189 (347)
                        .++.|.+||..+++.+..+..+......       +.+.+++..+++ ....++.+.+|+....+......   ...+
T Consensus        93 ~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~---~~~~  169 (373)
T d2madh_          93 GKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVVQGGSSDDQLLS---SPTC  169 (373)
T ss_pred             cccceEEEEEECCCCcEEEEEecCCcceeEeccCCCcEEEEeCCCcEEEEEEcCCCceEEeeccCCeEEEEec---ccee
Confidence              4578999999999888776655443322       233333333322 23445667777766554433332   3567


Q ss_pred             EEEcCCCCeE-EEEecCCcEEEEeCCCCceEEEecCC------CCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcC
Q 019006          190 VSFSDASDKI-YTGGIDNDVKVWDLRKGEVSMTLQGH------QDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQN  262 (347)
Q Consensus       190 ~~~~~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~------~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~  262 (347)
                      +.+++++..+ ++.+.|+.+.+||...++.......+      ......+.+.+++. ++..+.++.+.+|+....... 
T Consensus       170 ~~~s~~g~~~~v~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~-  247 (373)
T d2madh_         170 YHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSGR-IVWPVYSGKILQADISAAGAT-  247 (373)
T ss_pred             EEEecCCCcEEEEEcCCCeEEEEEcCCceeeEEEeeeccccCccceeeeEEECCCce-EEEecCCceEEEEEcCCCeEE-
Confidence            8889988755 57889999999999887665544322      12234455666554 455567889999987643211 


Q ss_pred             ceeEEEeccccc------cccceEEEEECCCCCEE----------EEeeCCCeEEEEeCCCceeeEEecCCccCeeeEEE
Q 019006          263 RCVKILEGHQHN------FEKNLLKCGWSPDGSKV----------TAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVF  326 (347)
Q Consensus       263 ~~~~~~~~~~~~------~~~~~~~~~~s~~g~~l----------~sgs~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~  326 (347)
                       ...........      .......+++++++..+          ++...++.+.+||..+++.+..+. +...+..++|
T Consensus       248 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~d~~t~~~~~~~~-~~~~~~~~a~  325 (373)
T d2madh_         248 -NKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQIS-LGHDVDAISV  325 (373)
T ss_pred             -EEEeeccccCcEEeeeeccCcceeeEEecCCCeEEEecCCCceEEeecCCCeEEEEECCCCcEEEEec-CCCCeeEEEE
Confidence             11111111000      01122334555655544          455667789999999999888775 6677899999


Q ss_pred             cCCCC--EEEEecCCCcEEeecC
Q 019006          327 HATEP--VIGSCSSDKQIYLGEI  347 (347)
Q Consensus       327 ~~~~~--~l~s~s~D~~i~i~~~  347 (347)
                      +|+++  ++++++.|++|++||+
T Consensus       326 spDG~~~l~vt~~~d~~v~v~D~  348 (373)
T d2madh_         326 AQDGGPDLYALSAGTEVLHIYDA  348 (373)
T ss_pred             CCCCCEEEEEEeCCCCeEEEEEC
Confidence            99998  5578999999999985


No 41 
>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}
Probab=99.85  E-value=1.9e-19  Score=153.72  Aligned_cols=246  Identities=13%  Similarity=0.101  Sum_probs=171.3

Q ss_pred             CccccEEEEEECCCCCeE-EEeeCCCcEEEEeccCCCeeeEEEeCcc-----cceeEEEEcCCCCEEEEec---------
Q 019006           55 GHQSAVYTMKFNPAGTVI-ASGSHDRDIFLWHVHGDCKNFMVLKGHK-----NAILDLHWTTDGSQIISAS---------  119 (347)
Q Consensus        55 ~h~~~V~~v~~~~~~~~l-~s~~~d~~v~~w~~~~~~~~~~~~~~h~-----~~v~~~~~~~~~~~l~s~~---------  119 (347)
                      .+...+.+++|+|||++| ++++.++.|++||+.. .+....+..+.     ..+..++|+|+++++++++         
T Consensus        31 ~~~~~~~~i~~spDg~~l~v~~~~~~~v~v~D~~t-~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~~~~~~~~~  109 (337)
T d1pbyb_          31 DAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVT-GETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTH  109 (337)
T ss_dssp             TCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTT-CCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSC
T ss_pred             CCCCCccEEEECCCCCEEEEEECCCCeEEEEECCC-CcEEEEEecCCCcccccceeeEEEcCCCcEEEEeecCCcceeee
Confidence            345567899999999987 5677899999999964 34444444432     3456789999999998776         


Q ss_pred             ---CCCeEEEEECCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeecCCCCceE--------
Q 019006          120 ---PDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQIT--------  188 (347)
Q Consensus       120 ---~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~~~~~v~--------  188 (347)
                         .+..+.+||..+++....+... ..+..+.+++++..+ ++++  +.+.+||...++....++......        
T Consensus       110 ~~~~~~~~~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l-~~~~--~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~  185 (337)
T d1pbyb_         110 FEVQPTRVALYDAETLSRRKAFEAP-RQITMLAWARDGSKL-YGLG--RDLHVMDPEAGTLVEDKPIQSWEAETYAQPDV  185 (337)
T ss_dssp             EEECCCEEEEEETTTTEEEEEEECC-SSCCCEEECTTSSCE-EEES--SSEEEEETTTTEEEEEECSTTTTTTTBCCCBC
T ss_pred             ccccccceeeccccCCeEEEecccc-CCceEEEEcCCCCEE-EEEc--CCcceeeeecCcEEEEeecCCccccceecCCc
Confidence               4578899999998877766543 345566777776554 4554  447889988776655443211111        


Q ss_pred             ----------------EEEEcCCCCeEEEEecCCcEEEEeCCCCceEE-EecCCCCceeEEEECCCCCEEEEEcCCCcEE
Q 019006          189 ----------------AVSFSDASDKIYTGGIDNDVKVWDLRKGEVSM-TLQGHQDMITGMSLSPDGSYLLTNGMDCKLC  251 (347)
Q Consensus       189 ----------------~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~-~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~  251 (347)
                                      ......+......+..++.+.+||..++.... .+..+...+..+.++|++.+++.+  ++.++
T Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~  263 (337)
T d1pbyb_         186 LAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLE  263 (337)
T ss_dssp             CCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEE
T ss_pred             ceeeccccccceeeeeeeeeeeccceeeecccCccEEEEEcCCCcEEEEEecCCCcceEEEEecccceEEEEc--cccEE
Confidence                            11111112222233445568999998877544 344566678889999999988776  47899


Q ss_pred             EEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCCceeeEEecC
Q 019006          252 IWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPG  316 (347)
Q Consensus       252 ~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~~~~~~  316 (347)
                      +||+...    +.+..+..     ...+.+++|+|||++|++|+.|+.|++||..+++.+.+++-
T Consensus       264 v~d~~~~----~~~~~~~~-----~~~~~~~~~s~dG~~l~v~~~~~~i~v~D~~t~~~v~~i~~  319 (337)
T d1pbyb_         264 SFDLEKN----ASIKRVPL-----PHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDL  319 (337)
T ss_dssp             EEETTTT----EEEEEEEC-----SSCCCEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEEEC
T ss_pred             EEECCCC----cEEEEEcC-----CCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCcEEEEEEC
Confidence            9998743    33443332     23567899999999999999999999999999998887653


No 42 
>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}
Probab=99.81  E-value=1.1e-17  Score=144.07  Aligned_cols=273  Identities=11%  Similarity=0.064  Sum_probs=177.0

Q ss_pred             EECCCCCeEEEee-----CCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEec----------CCCeEEEEE
Q 019006           64 KFNPAGTVIASGS-----HDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISAS----------PDKTLRAWD  128 (347)
Q Consensus        64 ~~~~~~~~l~s~~-----~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~----------~dg~i~iwd  128 (347)
                      +.+|+|+.+++..     .++.|++||... .+....+..+.  ...++|+|||++|+.++          .|+.|++||
T Consensus         8 a~spdg~~~~v~~~~~~~~~~~v~v~D~~t-g~~~~~~~~g~--~~~~a~SpDg~~l~v~~~~~~~~~~g~~d~~v~v~D   84 (355)
T d2bbkh_           8 APAPDARRVYVNDPAHFAAVTQQFVIDGEA-GRVIGMIDGGF--LPNPVVADDGSFIAHASTVFSRIARGERTDYVEVFD   84 (355)
T ss_dssp             CCCCCTTEEEEEECGGGCSSEEEEEEETTT-TEEEEEEEECS--SCEEEECTTSSCEEEEEEEEEETTEEEEEEEEEEEC
T ss_pred             eeCCCCCEEEEEecccCCCcCeEEEEECCC-CcEEEEEECCC--CCceEEcCCCCEEEEEeCCCccccccCCCCEEEEEE
Confidence            4578999887653     456799999864 34445555443  34789999999887653          478999999


Q ss_pred             CCCCceeeeeeccCc-------ceeEeecCCCCCCEEEE-EcCCCceEEEeCCCCCceeecCCCCc--------eEEEEE
Q 019006          129 VETGKQIKKMAEHNS-------FVNSCCPSRRGPPLVVS-GSDDGTAKLWDMRQRGAIQTFPDKYQ--------ITAVSF  192 (347)
Q Consensus       129 ~~~~~~~~~~~~~~~-------~v~~~~~~~~~~~~~~s-~~~d~~i~iwd~~~~~~~~~~~~~~~--------v~~~~~  192 (347)
                      ..+++.+..+..+..       ....+.+++++..+++. .+.+..+.+||..++..+..+.....        ...+.+
T Consensus        85 ~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (355)
T d2bbkh_          85 PVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMH  164 (355)
T ss_dssp             TTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEE
T ss_pred             CCCCCEEEEEecCCcceeecCCCCceEEEecCCCeeEEecCCCCceeeeeecCCCcEeeEEecCCcceEeecCCcceEEE
Confidence            999988776654322       12234566666544333 34567889999998887766554322        223444


Q ss_pred             cCCCCeEEEEe-cCCcEEEEeCCCCceEEEecCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEecc
Q 019006          193 SDASDKIYTGG-IDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGH  271 (347)
Q Consensus       193 ~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~  271 (347)
                      ++++..++... .++.+.+++.....     ..+...+....+.+++..++.++.++.+.+|++.....  ..+.....+
T Consensus       165 ~~dg~~~~v~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~~~~~  237 (355)
T d2bbkh_         165 CRDGSLAKVAFGTEGTPEITHTEVFH-----PEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDA--KFLPAVEAL  237 (355)
T ss_dssp             ETTSCEEEEECCSSSCCEEEECCCCS-----CTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSC--EECCCEESS
T ss_pred             cCCCCEEEEEecCCCeEEEEeccccc-----ceecceeeeccccCCCCeEEEecCCCeEEEEecCCCcE--EEEeccCCc
Confidence            55544444322 22334444333221     12334456677888888999999999999999875321  111111111


Q ss_pred             ccc------cccceEEEEECCCCCEEEEeeCC----------CeEEEEeCCCceeeEEecCCccCeeeEEEcCCCC--EE
Q 019006          272 QHN------FEKNLLKCGWSPDGSKVTAGSSD----------RMVYIWDTTSRRILYKLPGHTGSVNESVFHATEP--VI  333 (347)
Q Consensus       272 ~~~------~~~~~~~~~~s~~g~~l~sgs~d----------g~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~--~l  333 (347)
                      ...      .......+++++++..++..+.+          +.|++||..+++.+.++. +...+..++|+|+++  ++
T Consensus       238 ~~~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~v~d~~t~~~~~~~~-~~~~~~~~a~spDG~~~l~  316 (355)
T d2bbkh_         238 TEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFE-MGHEIDSINVSQDEKPLLY  316 (355)
T ss_dssp             CHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEE-EEEEECEEEECCSSSCEEE
T ss_pred             ccceEeeeeeccceEEEEEeCCCCeEEEEeccCCceeecCCCCeEEEEeCCCCcEEEEec-CCCCEEEEEEcCCCCeEEE
Confidence            100      01122346789999988776543          479999999999888776 345689999999997  56


Q ss_pred             EEecCCCcEEeecC
Q 019006          334 GSCSSDKQIYLGEI  347 (347)
Q Consensus       334 ~s~s~D~~i~i~~~  347 (347)
                      ++++.|++|++||+
T Consensus       317 v~~~~d~~i~v~D~  330 (355)
T d2bbkh_         317 ALSTGDKTLYIHDA  330 (355)
T ss_dssp             EEETTTTEEEEEET
T ss_pred             EEECCCCEEEEEEC
Confidence            78888999999985


No 43 
>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}
Probab=99.81  E-value=1.8e-18  Score=148.08  Aligned_cols=254  Identities=12%  Similarity=0.103  Sum_probs=168.3

Q ss_pred             eEec-CccccEEEEEECCCCCeE-EEeeCCCcEEEEeccCCCeeeEEEeC------cccceeEEEEcCCCCEEEEec---
Q 019006           51 MLLT-GHQSAVYTMKFNPAGTVI-ASGSHDRDIFLWHVHGDCKNFMVLKG------HKNAILDLHWTTDGSQIISAS---  119 (347)
Q Consensus        51 ~~~~-~h~~~V~~v~~~~~~~~l-~s~~~d~~v~~w~~~~~~~~~~~~~~------h~~~v~~~~~~~~~~~l~s~~---  119 (347)
                      ..+. .|...+.+++|+|||++| +++..++.|++||+... +....+..      +...+..++|+|||++++.++   
T Consensus        32 ~t~~~~~~~~p~~l~~spDG~~l~v~~~~~~~v~~~d~~t~-~~~~~~~~~~~~~~~~~~~~~v~~s~DG~~l~v~~~~~  110 (346)
T d1jmxb_          32 KSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTC-KNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPT  110 (346)
T ss_dssp             EEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTT-EEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEE
T ss_pred             EEEEcCCCCCcceEEECCCCCEEEEEECCCCcEEEEeCccC-eeeeeecccccccccCCceEEEEEecCCCEEEEEecCC
Confidence            3343 456678899999999976 56668899999999643 33333322      123456899999999988765   


Q ss_pred             ---------CCCeEEEEECCCCceeeeeecc--CcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeecCCCCceE
Q 019006          120 ---------PDKTLRAWDVETGKQIKKMAEH--NSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQIT  188 (347)
Q Consensus       120 ---------~dg~i~iwd~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~~~~~v~  188 (347)
                               .++.+.+|+..+++....+..+  ...+..... ..+..++++ +  ..+.+|++.+++.+..+.......
T Consensus       111 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~  186 (346)
T d1jmxb_         111 QRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRA-ADDGSLYVA-G--PDIYKMDVKTGKYTVALPLRNWNR  186 (346)
T ss_dssp             EECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEE-CTTSCEEEE-S--SSEEEECTTTCCEEEEECSTTCCC
T ss_pred             cceeeeeccCcceEEEEecccceeeeEEEeeeccCceEEEEe-cCCCEEEEe-C--CcceEEEccCCCEEEEEecCCCcc
Confidence                     4678899998877654433322  122222223 233344443 2  458889988777666554332222


Q ss_pred             EEEEcCCC--------------------------CeEEEEecCCcEEEEeCCCCceEEE-ecCCCCceeEEEECCCCCEE
Q 019006          189 AVSFSDAS--------------------------DKIYTGGIDNDVKVWDLRKGEVSMT-LQGHQDMITGMSLSPDGSYL  241 (347)
Q Consensus       189 ~~~~~~~~--------------------------~~l~~~~~dg~i~iwd~~~~~~~~~-~~~~~~~i~~v~~~~~~~~l  241 (347)
                      .+.++|++                          ..++++..+..+.+||+.++..... ...|...+..+.+++++.++
T Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (346)
T d1jmxb_         187 KGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQ  266 (346)
T ss_dssp             TTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTE
T ss_pred             ceEEeccccEEEEEecCCCceEeeeeeeeeccCceeEeeccCCceEEEEECCCCceEEEEeecccceeEEEEEeCCCCEE
Confidence            22233322                          2233444556788899887765443 44567778889999998888


Q ss_pred             EEEcCCCcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCCceeeEEecCCcc
Q 019006          242 LTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTG  319 (347)
Q Consensus       242 ~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~  319 (347)
                      +.... +.+.+||....    +.+..+..     ...+..++|+|||++|++|+.||.|++||..+++.+.+++-+.+
T Consensus       267 ~~~~~-~~v~v~d~~~~----~~~~~~~~-----~~~~~~va~s~DG~~l~v~~~d~~v~v~D~~t~~~i~~i~~p~g  334 (346)
T d1jmxb_         267 IYGVL-NRLAKYDLKQR----KLIKAANL-----DHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKLPGG  334 (346)
T ss_dssp             EEEEE-SEEEEEETTTT----EEEEEEEC-----SSCCCEEEECSSSSCEEEESBSSEEEEEETTTTEEEEEEECSSS
T ss_pred             EEecC-CeEEEEECCCC----cEEEEEcC-----CCCEEEEEEcCCCCEEEEEeCCCcEEEEECccCCEEEEEECCCC
Confidence            87664 57999998743    33333332     13477899999999999999999999999999999988875443


No 44 
>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}
Probab=99.78  E-value=4.9e-16  Score=132.22  Aligned_cols=252  Identities=13%  Similarity=0.153  Sum_probs=166.6

Q ss_pred             cCccccEEEEEECCCCCeEEE-eeCCCcEEEEeccCCCee--eEEEeCcccceeEEEEcCCCCEEEEecC-CCeEEEEEC
Q 019006           54 TGHQSAVYTMKFNPAGTVIAS-GSHDRDIFLWHVHGDCKN--FMVLKGHKNAILDLHWTTDGSQIISASP-DKTLRAWDV  129 (347)
Q Consensus        54 ~~h~~~V~~v~~~~~~~~l~s-~~~d~~v~~w~~~~~~~~--~~~~~~h~~~v~~~~~~~~~~~l~s~~~-dg~i~iwd~  129 (347)
                      ..|.+.|..|+|+|||++|++ +..|+.|++|++......  ......+...+..++|+|||++|++++. ++.+.+|+.
T Consensus        33 ~~~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~~~~~~~~~~~~~~p~~l~~spDg~~l~v~~~~~~~v~~~~~  112 (333)
T d1ri6a_          33 VDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRL  112 (333)
T ss_dssp             EECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred             EcCCCCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCCCCcEEEeeecccCCCceEEEEcCCCCEEeecccCCCceeeecc
Confidence            368889999999999998855 455899999998643222  2222334456788999999999988875 678999987


Q ss_pred             CCCceeee--eeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCcee-------ecCCCCceEEEEEcCCCCeEE
Q 019006          130 ETGKQIKK--MAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQ-------TFPDKYQITAVSFSDASDKIY  200 (347)
Q Consensus       130 ~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~-------~~~~~~~v~~~~~~~~~~~l~  200 (347)
                      ........  ...+...+..+.+++++..++.....+..+.+|+........       ..........+.|++++..++
T Consensus       113 ~~~~~~~~~~~~~~~~~~~~v~~s~d~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~g~~p~~i~~~~~~~~~~  192 (333)
T d1ri6a_         113 EDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAY  192 (333)
T ss_dssp             ETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEE
T ss_pred             ccccceecccccCCCccceEEEeeecceeeeccccccceeeEEEeccCCcceeeeceeeeeecCCCccEEEEeccceeEE
Confidence            76543322  233445556667777776666666677889999987654322       122334567899999998877


Q ss_pred             EEe-cCCcEEEEeCCCCc----eEEEec------CCCCceeEEEECCCCCEEEEE-cCCCcEEEEeCCCCCCcCceeEEE
Q 019006          201 TGG-IDNDVKVWDLRKGE----VSMTLQ------GHQDMITGMSLSPDGSYLLTN-GMDCKLCIWDMRPYAPQNRCVKIL  268 (347)
Q Consensus       201 ~~~-~dg~i~iwd~~~~~----~~~~~~------~~~~~i~~v~~~~~~~~l~t~-~~d~~i~~wd~~~~~~~~~~~~~~  268 (347)
                      ... ..+...+|+.....    ......      ........+++++++++++.. ..++.+.+|++.............
T Consensus       193 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (333)
T d1ri6a_         193 CVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQ  272 (333)
T ss_dssp             EEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEE
T ss_pred             eeccccCceEEEeecccccceeeeeeeeeeecCCCccccceeEEEecccCceeeecccCCeEEEEEEcCCCCEEEEEEEe
Confidence            654 55677888764322    111211      122345678899999877655 556799999986532221111111


Q ss_pred             eccccccccceEEEEECCCCCEEEEee-CCCeEEEE--eCCCcee
Q 019006          269 EGHQHNFEKNLLKCGWSPDGSKVTAGS-SDRMVYIW--DTTSRRI  310 (347)
Q Consensus       269 ~~~~~~~~~~~~~~~~s~~g~~l~sgs-~dg~i~vw--d~~~~~~  310 (347)
                      .     ....+..++|+|||++|++++ .++.|.+|  |..++.+
T Consensus       273 ~-----~~~~p~~~a~spDGk~l~va~~~~~~v~v~~id~~tG~l  312 (333)
T d1ri6a_         273 P-----TETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLL  312 (333)
T ss_dssp             E-----CSSSCCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEE
T ss_pred             C-----CCCCeeEEEEeCCCCEEEEEECCCCeEEEEEEECCCCcE
Confidence            1     123456789999999887665 56889998  5566654


No 45 
>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}
Probab=99.77  E-value=3.5e-16  Score=134.53  Aligned_cols=255  Identities=11%  Similarity=0.077  Sum_probs=166.0

Q ss_pred             EEEEECCCCCeEEEe----------eCCCcEEEEeccCCCeeeEEEeCcc-------cceeEEEEcCCCCEEEEec--CC
Q 019006           61 YTMKFNPAGTVIASG----------SHDRDIFLWHVHGDCKNFMVLKGHK-------NAILDLHWTTDGSQIISAS--PD  121 (347)
Q Consensus        61 ~~v~~~~~~~~l~s~----------~~d~~v~~w~~~~~~~~~~~~~~h~-------~~v~~~~~~~~~~~l~s~~--~d  121 (347)
                      ..++|+|||+.|+++          +.|+.|++||.... +....+..+.       .....++|++++++++.++  .+
T Consensus        50 ~~~a~SpDg~~l~v~~~~~~~~~~g~~d~~v~v~D~~t~-~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~  128 (355)
T d2bbkh_          50 PNPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTL-LPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPA  128 (355)
T ss_dssp             CEEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC-CEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSS
T ss_pred             CceEEcCCCCEEEEEeCCCccccccCCCCEEEEEECCCC-CEEEEEecCCcceeecCCCCceEEEecCCCeeEEecCCCC
Confidence            368999999988764          34789999998643 3333332221       2235688999999887764  56


Q ss_pred             CeEEEEECCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeec-------CCCCceEEEEEcC
Q 019006          122 KTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTF-------PDKYQITAVSFSD  194 (347)
Q Consensus       122 g~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~-------~~~~~v~~~~~~~  194 (347)
                      ..+.+|+..+++.+..+.........    +......++.+.|+...++...........       .....+....+.+
T Consensus       129 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (355)
T d2bbkh_         129 PAVGVVDLEGKAFKRMLDVPDCYHIF----PTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQ  204 (355)
T ss_dssp             CEEEEEETTTTEEEEEEECCSEEEEE----EEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEET
T ss_pred             ceeeeeecCCCcEeeEEecCCcceEe----ecCCcceEEEcCCCCEEEEEecCCCeEEEEecccccceecceeeeccccC
Confidence            78999999998887766544322211    111223445556666665554433222111       1122344566777


Q ss_pred             CCCeEEEEecCCcEEEEeCCCCceEE--EecCC----------CCceeEEEECCCCCEEEEEcCC----------CcEEE
Q 019006          195 ASDKIYTGGIDNDVKVWDLRKGEVSM--TLQGH----------QDMITGMSLSPDGSYLLTNGMD----------CKLCI  252 (347)
Q Consensus       195 ~~~~l~~~~~dg~i~iwd~~~~~~~~--~~~~~----------~~~i~~v~~~~~~~~l~t~~~d----------~~i~~  252 (347)
                      ++..++.++.++.+++|++..++...  ....+          ......+++++++..++....+          +.|.+
T Consensus       205 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~v  284 (355)
T d2bbkh_         205 KAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVV  284 (355)
T ss_dssp             TTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEE
T ss_pred             CCCeEEEecCCCeEEEEecCCCcEEEEeccCCcccceEeeeeeccceEEEEEeCCCCeEEEEeccCCceeecCCCCeEEE
Confidence            88888999999999999998765422  11111          1223458889999887765433          46999


Q ss_pred             EeCCCCCCcCceeEEEeccccccccceEEEEECCCCC--EEEEeeCCCeEEEEeCCCceeeEEecCCccCeeeEEEcCC
Q 019006          253 WDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGS--KVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHAT  329 (347)
Q Consensus       253 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~--~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~  329 (347)
                      ||....    +.+..+..     ...+..++|+|||+  ++++++.|+.|++||..+++++.+++++......+.+.+.
T Consensus       285 ~d~~t~----~~~~~~~~-----~~~~~~~a~spDG~~~l~v~~~~d~~i~v~D~~tg~~~~~i~~~G~~p~~i~~~d~  354 (355)
T d2bbkh_         285 LDAKTG----ERLAKFEM-----GHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGHGPQVITTADM  354 (355)
T ss_dssp             EETTTC----CEEEEEEE-----EEEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEECCCCSSCCEEECCCC
T ss_pred             EeCCCC----cEEEEecC-----CCCEEEEEEcCCCCeEEEEEECCCCEEEEEECCCCCEEEEEeCcCCCccEEEeCCC
Confidence            998753    23333322     23467889999997  4567788999999999999999999887666666555543


No 46 
>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}
Probab=99.76  E-value=3.1e-15  Score=129.54  Aligned_cols=253  Identities=6%  Similarity=-0.080  Sum_probs=168.9

Q ss_pred             EEEECCCCCeEEEee----------CCCcEEEEeccCCCeeeEEEeCcccce-------eEEEEcCCCCEEEEec--CCC
Q 019006           62 TMKFNPAGTVIASGS----------HDRDIFLWHVHGDCKNFMVLKGHKNAI-------LDLHWTTDGSQIISAS--PDK  122 (347)
Q Consensus        62 ~v~~~~~~~~l~s~~----------~d~~v~~w~~~~~~~~~~~~~~h~~~v-------~~~~~~~~~~~l~s~~--~dg  122 (347)
                      .++|+|||+.|++++          .++.|.+||.... +....+..+....       ..+.|+++++.++...  .++
T Consensus        70 ~~a~SpDG~~l~va~~~~~~~~~~~~~~~v~v~D~~t~-~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~  148 (373)
T d2madh_          70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTF-LPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGP  148 (373)
T ss_pred             cEEEcCCCCEEEEEeecCCcccccccceEEEEEECCCC-cEEEEEecCCcceeEeccCCCcEEEEeCCCcEEEEEEcCCC
Confidence            789999999998875          4578999998643 3333444443322       4578889888766554  456


Q ss_pred             eEEEEECCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeecCC-----C--CceEEEEEcCC
Q 019006          123 TLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPD-----K--YQITAVSFSDA  195 (347)
Q Consensus       123 ~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~~-----~--~~v~~~~~~~~  195 (347)
                      .+.+|+....+......    ......+.+.+...+++.+.|+++.+||...+........     .  .......++++
T Consensus       149 ~~~~~~~~~~~~~~~~~----~~~~~~~s~~g~~~~v~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (373)
T d2madh_         149 AVGLVVQGGSSDDQLLS----SPTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKS  224 (373)
T ss_pred             ceEEeeccCCeEEEEec----cceeEEEecCCCcEEEEEcCCCeEEEEEcCCceeeEEEeeeccccCccceeeeEEECCC
Confidence            78899987766544332    2334556677777888999999999999887765543321     1  12334455554


Q ss_pred             CCeEEEEecCCcEEEEeCCCCceEE--EecCCC----------CceeEEEECCCCCEE----------EEEcCCCcEEEE
Q 019006          196 SDKIYTGGIDNDVKVWDLRKGEVSM--TLQGHQ----------DMITGMSLSPDGSYL----------LTNGMDCKLCIW  253 (347)
Q Consensus       196 ~~~l~~~~~dg~i~iwd~~~~~~~~--~~~~~~----------~~i~~v~~~~~~~~l----------~t~~~d~~i~~w  253 (347)
                      + .++..+.++.+++|+........  ....+.          .....+++++++..+          ++...++.+.+|
T Consensus       225 ~-~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~  303 (373)
T d2madh_         225 G-RIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSV  303 (373)
T ss_pred             c-eEEEecCCceEEEEEcCCCeEEEEEeeccccCcEEeeeeccCcceeeEEecCCCeEEEecCCCceEEeecCCCeEEEE
Confidence            4 45566678899999987664322  111111          122334555555544          445566788999


Q ss_pred             eCCCCCCcCceeEEEeccccccccceEEEEECCCCCE--EEEeeCCCeEEEEeCCCceeeEEecCCccCeeeEEEcCC
Q 019006          254 DMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSK--VTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHAT  329 (347)
Q Consensus       254 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~--l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~  329 (347)
                      |....    +.+..+..     ...+..++|+|||+.  +++++.|+.|++||+.+++.+..+.+|......+++-++
T Consensus       304 d~~t~----~~~~~~~~-----~~~~~~~a~spDG~~~l~vt~~~d~~v~v~D~~tg~~~~~~~~~g~~P~~l~~~~~  372 (373)
T d2madh_         304 TGLVG----QTSSQISL-----GHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQSTVELGSGPQVLSVMNE  372 (373)
T ss_pred             ECCCC----cEEEEecC-----CCCeeEEEECCCCCEEEEEEeCCCCeEEEEECCCCCEEEEECCCCCCCcEEEEecC
Confidence            98753    23333321     245778999999984  468899999999999999999999988888887777544


No 47 
>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}
Probab=99.63  E-value=2.9e-14  Score=123.36  Aligned_cols=280  Identities=7%  Similarity=-0.060  Sum_probs=172.1

Q ss_pred             ccEEEEEECCCCCe---EEEeeCCCcEEE--EeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEec----------CCC
Q 019006           58 SAVYTMKFNPAGTV---IASGSHDRDIFL--WHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISAS----------PDK  122 (347)
Q Consensus        58 ~~V~~v~~~~~~~~---l~s~~~d~~v~~--w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~----------~dg  122 (347)
                      +....++..++++.   .+....++...+  ||..+ .+....+..+...  .++|+|||+.|+.++          .|+
T Consensus        20 g~~~~~a~~~~~~~~~v~~~~~~~g~~~~~~~d~~~-~~~~~~~~~~~~~--~~a~spDg~~i~~~~~~~~~~~~g~~d~   96 (368)
T d1mdah_          20 GSSCDHGPGAISRRSHITLPAYFAGTTENWVSCAGC-GVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTD   96 (368)
T ss_dssp             CCCBCCCCCCCTTEEEEEECTTTCSSEEEEEEETTT-TEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEE
T ss_pred             CCccccccCCCCcceeEEeeccCCCcceEEEEeCCC-CcEEEEEeCCCCC--cceECCCCCEEEEEcccCccccccccCC
Confidence            33344455677764   333556666554  45533 3334444444433  588999999988754          477


Q ss_pred             eEEEEECCCCceeeeeeccCc-------ceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeecCCCCceEEEEEcCC
Q 019006          123 TLRAWDVETGKQIKKMAEHNS-------FVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDA  195 (347)
Q Consensus       123 ~i~iwd~~~~~~~~~~~~~~~-------~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~  195 (347)
                      .|++||..+++.+..+..+..       ....+.+++++..++++...++.+.+||+.+++....++.......  ....
T Consensus        97 ~v~v~D~~t~~~~~~i~~p~~~~~~~g~~p~~~a~SpDGk~l~va~~~~~~v~~~d~~~~~~~~~~~~~~~~~~--~~~~  174 (368)
T d1mdah_          97 YVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFHI--HPGA  174 (368)
T ss_dssp             EEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEEEEEEECSSCCCC--EEEE
T ss_pred             eEEEEECCCCcEeeeecCCccceecccCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcEeEEeeccCcceE--ccCC
Confidence            899999999988777654321       1234667888877777666789999999998887766543322111  1112


Q ss_pred             CCeEEEEecCCcEEEEeCCCCceEEE------ecCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEe
Q 019006          196 SDKIYTGGIDNDVKVWDLRKGEVSMT------LQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILE  269 (347)
Q Consensus       196 ~~~l~~~~~dg~i~iwd~~~~~~~~~------~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~  269 (347)
                      ...++..+.||.+.++++........      ...+...+..+.+.+++..+.+.+  +.+.++++......  ......
T Consensus       175 ~~~~v~~~~Dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~--~~v~~~~~~~~~~~--~~~~~~  250 (368)
T d1mdah_         175 AATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVA--SSILQGDIPAAGAT--MKAAID  250 (368)
T ss_dssp             TTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEEECBS--SCCEEEECCSSCCE--EECCCC
T ss_pred             CceEEEEcCCCCEEEEEecCCceeeeeeecccccccccceeecccccCcEEEEecC--CCEEEEeecCCceE--EEeecc
Confidence            34566677788888887765432221      122333455677777776665543  44556665432110  000011


Q ss_pred             ccccc------cccceEEEEECCCCCEEEEeeC---------CCeEEEEeCCCceeeEEecCCccCeeeEEEcCCCC--E
Q 019006          270 GHQHN------FEKNLLKCGWSPDGSKVTAGSS---------DRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEP--V  332 (347)
Q Consensus       270 ~~~~~------~~~~~~~~~~s~~g~~l~sgs~---------dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~--~  332 (347)
                      .....      .......++++|++..++....         ...|.+||..+++.+.++. +...+..++|+|+++  +
T Consensus       251 ~~~~~~~~~~~~~~g~~~~a~~~~~~~~~v~~~~~~~~~~~~~~~v~v~D~~t~~~~~~~~-~~~~~~~~a~spDG~~~l  329 (368)
T d1mdah_         251 GNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPIS-NGHDSDAIIAAQDGASDN  329 (368)
T ss_dssp             SSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCE-EEEEECEEEECCSSSCEE
T ss_pred             cccceeeeeeecCCCceeEEEcCCCCEEEEEecCCCceeecCCceEEEEECCCCcEeEEec-CCCceeEEEECCCCCEEE
Confidence            10000      0011224668899888766532         2359999999999887775 446789999999986  4


Q ss_pred             EEEecCCCcEEeecC
Q 019006          333 IGSCSSDKQIYLGEI  347 (347)
Q Consensus       333 l~s~s~D~~i~i~~~  347 (347)
                      +++.+.|++|++||.
T Consensus       330 y~s~~~~~~v~v~D~  344 (368)
T d1mdah_         330 YANSAGTEVLDIYDA  344 (368)
T ss_dssp             EEEETTTTEEEEEES
T ss_pred             EEEeCCCCeEEEEEC
Confidence            578888999999984


No 48 
>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]}
Probab=99.62  E-value=1.8e-14  Score=125.35  Aligned_cols=267  Identities=13%  Similarity=0.101  Sum_probs=171.7

Q ss_pred             EEEeeCCCcEEEEeccCCCeeeEEEe------------------------------CcccceeEEEEcCCCCEEEEe-cC
Q 019006           72 IASGSHDRDIFLWHVHGDCKNFMVLK------------------------------GHKNAILDLHWTTDGSQIISA-SP  120 (347)
Q Consensus        72 l~s~~~d~~v~~w~~~~~~~~~~~~~------------------------------~h~~~v~~~~~~~~~~~l~s~-~~  120 (347)
                      ++||+.+|.|++|++... +.+..+.                              .|.........+|||++|+.. ..
T Consensus        14 f~Sgg~sG~V~V~dlpS~-r~l~~IpVfspd~~~g~g~~~es~~vl~~~~~~~~gd~hhP~~s~t~gtpDGr~lfV~d~~   92 (441)
T d1qnia2          14 FWSGGHQGEVRVLGVPSM-RELMRIPVFNVDSATGWGITNESKEILGGDQQYLNGDCHHPHISMTDGRYDGKYLFINDKA   92 (441)
T ss_dssp             EEECBTTCCEEEEEETTT-EEEEEECSSSBCTTTCTTTSHHHHHHHCSSSCCSCCCBCCCEEEEETTEEEEEEEEEEETT
T ss_pred             EEeCCCCCcEEEEeCCCC-cEEEEEEeEcCCCCEEEEECCccceEEecccccccCcccCCCcceecccCCCCEEEEEcCC
Confidence            567888888888887532 2222221                              133334444457899988554 57


Q ss_pred             CCeEEEEECCCCceeeeeec-cCcceeEeecCCCCCCEEEEEcCCCce------------------EEEeCCCCCceeec
Q 019006          121 DKTLRAWDVETGKQIKKMAE-HNSFVNSCCPSRRGPPLVVSGSDDGTA------------------KLWDMRQRGAIQTF  181 (347)
Q Consensus       121 dg~i~iwd~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~s~~~d~~i------------------~iwd~~~~~~~~~~  181 (347)
                      +..|.++|+.+.+....+.. .......+++.+++....+++..+..+                  ..+|..+.......
T Consensus        93 ~~rVavIDl~t~k~~~ii~iP~g~gphgi~~spdg~t~YV~~~~~~~v~~~~dg~~~~~~~~~~~~~~iD~~t~~v~~qI  172 (441)
T d1qnia2          93 NTRVARIRLDIMKTDKITHIPNVQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDGTDFSLDNSYTMFTAIDAETMDVAWQV  172 (441)
T ss_dssp             TTEEEEEETTTTEEEEEEECTTCCCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCGGGEEEEEEEEETTTCSEEEEE
T ss_pred             CCEEEEEECCCCcEeeEEecCCCCCccceEEeccCCEEEEEeccCCcccccCcccccccccccceEEeecCccceeeEEE
Confidence            88999999999887665542 345566677777665544443333333                  44677766665555


Q ss_pred             CCCCceEEEEEcCCCCeEEEEecC-----------------------------------------CcEEEEeCCCCceEE
Q 019006          182 PDKYQITAVSFSDASDKIYTGGID-----------------------------------------NDVKVWDLRKGEVSM  220 (347)
Q Consensus       182 ~~~~~v~~~~~~~~~~~l~~~~~d-----------------------------------------g~i~iwd~~~~~~~~  220 (347)
                      +.......+.++|+++++++.+.+                                         +.+.+++....+...
T Consensus       173 ~v~~~p~~v~~spdGk~a~vt~~nse~~~~id~~t~~~~d~i~v~n~p~~~~~~~dGk~~~v~~~~v~vvd~~~~~~v~~  252 (441)
T d1qnia2         173 IVDGNLDNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVFNVERIAAAVKAGNFKTIGDSKVPVVDGRGESEFTR  252 (441)
T ss_dssp             EESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSBCEEEEEEHHHHHHHHHTTCCBCCTTCCCCEEECSSSCSSEE
T ss_pred             ecCCCccceEECCCCCEEEEEecCCCceEEEeccCcceEEEEEeCCccceEEEecCCCEEEeCCCCcEEEEcccCCceEE
Confidence            545567788999999988877643                                         233344444444445


Q ss_pred             EecCCCCceeEEEECCCCCEEEE-EcCCCcEEEEeCCCCCC----cCceeEEEeccccccccceEEEEECCCCCEEEEee
Q 019006          221 TLQGHQDMITGMSLSPDGSYLLT-NGMDCKLCIWDMRPYAP----QNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGS  295 (347)
Q Consensus       221 ~~~~~~~~i~~v~~~~~~~~l~t-~~~d~~i~~wd~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs  295 (347)
                      .+...+. ...+.++|||+++++ +..++++.+||+.....    .......+.++. ..--.....+|.++|....+.+
T Consensus       253 ~IPvgks-PhGv~vSPDGkyl~~~~~~~~tvsv~d~~k~~~~~~~~~~~~~~~~~~~-~~glgplh~~fd~~g~~yts~~  330 (441)
T d1qnia2         253 YIPVPKN-PHGLNTSPDGKYFIANGKLSPTVSVIAIDKLDDLFEDKIELRDTIVAEP-ELGLGPLHTTFDGRGNAYTTLF  330 (441)
T ss_dssp             EECCBSS-CCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHTTTSSCGGGGEEECC-BCCSCEEEEEECSSSEEEEEET
T ss_pred             EEeCCCC-ccCceECCCCCEEEEeCCcCCcEEEEEeehhhhHhhccCCcceEEEeec-ccccCcccceecCCceEEEccc
Confidence            5555444 578999999998765 56789999999864210    000000111110 0011235568999999999999


Q ss_pred             CCCeEEEEeCCC----------ceeeEEe-----cCCccCeeeEEEcCCCCEEEEe---cCCCc
Q 019006          296 SDRMVYIWDTTS----------RRILYKL-----PGHTGSVNESVFHATEPVIGSC---SSDKQ  341 (347)
Q Consensus       296 ~dg~i~vwd~~~----------~~~~~~~-----~~h~~~v~~~~~~~~~~~l~s~---s~D~~  341 (347)
                      .|.+|..|++..          ...+.++     +||...+...+|+|++++|+++   |.|..
T Consensus       331 ~ds~v~kw~~~~~~~~~~~~~~~~v~~~~~v~y~~GH~~~~~~~t~~pdGk~l~s~~k~s~dr~  394 (441)
T d1qnia2         331 IDSQVCKWNIADAIKHYNGDRVNYIRQKLDVQYQPGHNHASLTESRDADGKWLVVLSKFSKDRF  394 (441)
T ss_dssp             TTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCCCEEEEEESCCGGGS
T ss_pred             ccceEEEeccchhhhhhccCCCceeEeccccccCCCCCccccccccCCCCcEEEecCccccccC
Confidence            999999999642          1234444     6888889999999999999999   55543


No 49 
>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}
Probab=99.61  E-value=9e-14  Score=120.26  Aligned_cols=240  Identities=8%  Similarity=-0.013  Sum_probs=154.5

Q ss_pred             EEEECCCCCeEEEee----------CCCcEEEEeccCCCeeeEEEeCccc-------ceeEEEEcCCCCEEEEec-CCCe
Q 019006           62 TMKFNPAGTVIASGS----------HDRDIFLWHVHGDCKNFMVLKGHKN-------AILDLHWTTDGSQIISAS-PDKT  123 (347)
Q Consensus        62 ~v~~~~~~~~l~s~~----------~d~~v~~w~~~~~~~~~~~~~~h~~-------~v~~~~~~~~~~~l~s~~-~dg~  123 (347)
                      .++|+|+|+.|++.+          .|+.|.+||..+. +....+..+..       ....++|+|||++|+.+. .++.
T Consensus        69 ~~a~spDg~~i~~~~~~~~~~~~g~~d~~v~v~D~~t~-~~~~~i~~p~~~~~~~g~~p~~~a~SpDGk~l~va~~~~~~  147 (368)
T d1mdah_          69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTF-LPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSA  147 (368)
T ss_dssp             EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTC-CEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSC
T ss_pred             cceECCCCCEEEEEcccCccccccccCCeEEEEECCCC-cEeeeecCCccceecccCCccceEECCCCCEEEEEeCCCCe
Confidence            578999999888754          4778999998643 33333332221       234689999999998775 5799


Q ss_pred             EEEEECCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeec-------CCCCceEEEEEcCCC
Q 019006          124 LRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTF-------PDKYQITAVSFSDAS  196 (347)
Q Consensus       124 i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~-------~~~~~v~~~~~~~~~  196 (347)
                      +.+||+.+++.+..+..+.....    .+.+...+++.+.||++.++++.........       .....+....+.+++
T Consensus       148 v~~~d~~~~~~~~~~~~~~~~~~----~~~~~~~~v~~~~Dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  223 (368)
T d1mdah_         148 AAGLSVPGASDDQLTKSASCFHI----HPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPG  223 (368)
T ss_dssp             EEEEEETTTEEEEEEECSSCCCC----EEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTT
T ss_pred             EEEEECCCCcEeEEeeccCcceE----ccCCCceEEEEcCCCCEEEEEecCCceeeeeeecccccccccceeecccccCc
Confidence            99999999988777655443321    1223456778889999999987654332111       122234456666665


Q ss_pred             CeEEEEecCCcEEEEeCCCCceEEEe--cCC----------CCceeEEEECCCCCEEEEEcCC---------CcEEEEeC
Q 019006          197 DKIYTGGIDNDVKVWDLRKGEVSMTL--QGH----------QDMITGMSLSPDGSYLLTNGMD---------CKLCIWDM  255 (347)
Q Consensus       197 ~~l~~~~~dg~i~iwd~~~~~~~~~~--~~~----------~~~i~~v~~~~~~~~l~t~~~d---------~~i~~wd~  255 (347)
                      ..+++  ..+.+++++...+......  ..+          ......+++++++..++....+         ..|.+||.
T Consensus       224 ~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~a~~~~~~~~~v~~~~~~~~~~~~~~~v~v~D~  301 (368)
T d1mdah_         224 MLVWA--VASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTA  301 (368)
T ss_dssp             EEEEC--BSSCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEES
T ss_pred             EEEEe--cCCCEEEEeecCCceEEEeecccccceeeeeeecCCCceeEEEcCCCCEEEEEecCCCceeecCCceEEEEEC
Confidence            54443  3456777776654433211  111          1123457888888877654321         35889998


Q ss_pred             CCCCCcCceeEEEeccccccccceEEEEECCCCC-E-EEEeeCCCeEEEEeCCCceeeEEecCC
Q 019006          256 RPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGS-K-VTAGSSDRMVYIWDTTSRRILYKLPGH  317 (347)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~-~-l~sgs~dg~i~vwd~~~~~~~~~~~~h  317 (347)
                      ...+    .+..+..     ...+..++|+|||+ + ++++..|+.|++||..+++.+.+++-.
T Consensus       302 ~t~~----~~~~~~~-----~~~~~~~a~spDG~~~ly~s~~~~~~v~v~D~~tgk~~~~i~~g  356 (368)
T d1mdah_         302 SVGQ----TSGPISN-----GHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELD  356 (368)
T ss_dssp             SSCC----EEECCEE-----EEEECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCC
T ss_pred             CCCc----EeEEecC-----CCceeEEEECCCCCEEEEEEeCCCCeEEEEECCCCCEEEEEECC
Confidence            7542    2332221     23567889999997 3 467778999999999999999888743


No 50 
>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}
Probab=99.42  E-value=2e-11  Score=108.81  Aligned_cols=81  Identities=7%  Similarity=0.112  Sum_probs=65.7

Q ss_pred             ecCccccEEEEEECCCCCeEEEeeC---------CCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEecCCCe
Q 019006           53 LTGHQSAVYTMKFNPAGTVIASGSH---------DRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKT  123 (347)
Q Consensus        53 ~~~h~~~V~~v~~~~~~~~l~s~~~---------d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~  123 (347)
                      +.+|...|.++.|||||+.|+.++.         ++.+++||+.+.  ....+..|...+....|||||++||.. .++.
T Consensus        57 ~~~~~~~i~~~~~SpDg~~i~~~~~~~~~~r~s~~~~~~l~d~~~~--~~~~l~~~~~~~~~~~~SPDG~~ia~~-~~~~  133 (470)
T d2bgra1          57 FDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKR--QLITEERIPNNTQWVTWSPVGHKLAYV-WNND  133 (470)
T ss_dssp             TTTSSSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTT--EECCSSCCCTTEEEEEECSSTTCEEEE-ETTE
T ss_pred             hhhccCccceeEECCCCCEEEEEECCcceeeeccCceEEEEECCCC--cccccccCCccccccccccCcceeeEe-eccc
Confidence            4566788999999999999988754         567889999653  344577888899999999999999985 5678


Q ss_pred             EEEEECCCCceee
Q 019006          124 LRAWDVETGKQIK  136 (347)
Q Consensus       124 i~iwd~~~~~~~~  136 (347)
                      +.+|+..+++...
T Consensus       134 l~~~~~~~g~~~~  146 (470)
T d2bgra1         134 IYVKIEPNLPSYR  146 (470)
T ss_dssp             EEEESSTTSCCEE
T ss_pred             ceEEECCCCceee
Confidence            9999988876544


No 51 
>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]}
Probab=99.35  E-value=1.9e-10  Score=99.74  Aligned_cols=223  Identities=11%  Similarity=0.072  Sum_probs=144.2

Q ss_pred             EEEecCCCeEEEEECCCCceeeeeecc------------------------------CcceeEeecCCCCCCEEEEEcCC
Q 019006          115 IISASPDKTLRAWDVETGKQIKKMAEH------------------------------NSFVNSCCPSRRGPPLVVSGSDD  164 (347)
Q Consensus       115 l~s~~~dg~i~iwd~~~~~~~~~~~~~------------------------------~~~v~~~~~~~~~~~~~~s~~~d  164 (347)
                      ++|++.+|.|++|++.+++.+..+..-                              ..........+++..++++...+
T Consensus        14 f~Sgg~sG~V~V~dlpS~r~l~~IpVfspd~~~g~g~~~es~~vl~~~~~~~~gd~hhP~~s~t~gtpDGr~lfV~d~~~   93 (441)
T d1qnia2          14 FWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGITNESKEILGGDQQYLNGDCHHPHISMTDGRYDGKYLFINDKAN   93 (441)
T ss_dssp             EEECBTTCCEEEEEETTTEEEEEECSSSBCTTTCTTTSHHHHHHHCSSSCCSCCCBCCCEEEEETTEEEEEEEEEEETTT
T ss_pred             EEeCCCCCcEEEEeCCCCcEEEEEEeEcCCCCEEEEECCccceEEecccccccCcccCCCcceecccCCCCEEEEEcCCC
Confidence            567888999999999888877665320                              00111111234455567778889


Q ss_pred             CceEEEeCCCCCcee--ecCCCCceEEEEEcCCCCeE--EEEecCC-----------------cEEEEeCCCCceEEEec
Q 019006          165 GTAKLWDMRQRGAIQ--TFPDKYQITAVSFSDASDKI--YTGGIDN-----------------DVKVWDLRKGEVSMTLQ  223 (347)
Q Consensus       165 ~~i~iwd~~~~~~~~--~~~~~~~v~~~~~~~~~~~l--~~~~~dg-----------------~i~iwd~~~~~~~~~~~  223 (347)
                      .+|.++|+.+.+..+  .++.......++|+|+++..  +..+.+.                 .+..+|..+.+...++.
T Consensus        94 ~rVavIDl~t~k~~~ii~iP~g~gphgi~~spdg~t~YV~~~~~~~v~~~~dg~~~~~~~~~~~~~~iD~~t~~v~~qI~  173 (441)
T d1qnia2          94 TRVARIRLDIMKTDKITHIPNVQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDGTDFSLDNSYTMFTAIDAETMDVAWQVI  173 (441)
T ss_dssp             TEEEEEETTTTEEEEEEECTTCCCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCGGGEEEEEEEEETTTCSEEEEEE
T ss_pred             CEEEEEECCCCcEeeEEecCCCCCccceEEeccCCEEEEEeccCCcccccCcccccccccccceEEeecCccceeeEEEe
Confidence            999999999887765  44566788999999998854  3333321                 23457877777666655


Q ss_pred             CCCCceeEEEECCCCCEEEEEcCCC-----------------------------------------cEEEEeCCCCCCcC
Q 019006          224 GHQDMITGMSLSPDGSYLLTNGMDC-----------------------------------------KLCIWDMRPYAPQN  262 (347)
Q Consensus       224 ~~~~~i~~v~~~~~~~~l~t~~~d~-----------------------------------------~i~~wd~~~~~~~~  262 (347)
                      .. .....+.|+|+|+++++++.+.                                         .+.+++...    .
T Consensus       174 v~-~~p~~v~~spdGk~a~vt~~nse~~~~id~~t~~~~d~i~v~n~p~~~~~~~dGk~~~v~~~~v~vvd~~~~----~  248 (441)
T d1qnia2         174 VD-GNLDNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVFNVERIAAAVKAGNFKTIGDSKVPVVDGRGE----S  248 (441)
T ss_dssp             ES-SCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSBCEEEEEEHHHHHHHHHTTCCBCCTTCCCCEEECSSS----C
T ss_pred             cC-CCccceEECCCCCEEEEEecCCCceEEEeccCcceEEEEEeCCccceEEEecCCCEEEeCCCCcEEEEcccC----C
Confidence            43 3467899999999988876442                                         112222110    1


Q ss_pred             ceeEEEeccccccccceEEEEECCCCCEEE-EeeCCCeEEEEeCCCceee--------EEecCC---ccCeeeEEEcCCC
Q 019006          263 RCVKILEGHQHNFEKNLLKCGWSPDGSKVT-AGSSDRMVYIWDTTSRRIL--------YKLPGH---TGSVNESVFHATE  330 (347)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~-sgs~dg~i~vwd~~~~~~~--------~~~~~h---~~~v~~~~~~~~~  330 (347)
                      ..+..++..     .....+.++|||++++ +|..+++|.|||+.+.+..        ..+.++   .-......|.+++
T Consensus       249 ~v~~~IPvg-----ksPhGv~vSPDGkyl~~~~~~~~tvsv~d~~k~~~~~~~~~~~~~~~~~~~~~glgplh~~fd~~g  323 (441)
T d1qnia2         249 EFTRYIPVP-----KNPHGLNTSPDGKYFIANGKLSPTVSVIAIDKLDDLFEDKIELRDTIVAEPELGLGPLHTTFDGRG  323 (441)
T ss_dssp             SSEEEECCB-----SSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHTTTSSCGGGGEEECCBCCSCEEEEEECSSS
T ss_pred             ceEEEEeCC-----CCccCceECCCCCEEEEeCCcCCcEEEEEeehhhhHhhccCCcceEEEeecccccCcccceecCCc
Confidence            112222211     2245678999999875 5778999999998653211        011111   1224567899999


Q ss_pred             CEEEEecCCCcEEeecC
Q 019006          331 PVIGSCSSDKQIYLGEI  347 (347)
Q Consensus       331 ~~l~s~s~D~~i~i~~~  347 (347)
                      ..+.|...|.+|.-|++
T Consensus       324 ~~yts~~~ds~v~kw~~  340 (441)
T d1qnia2         324 NAYTTLFIDSQVCKWNI  340 (441)
T ss_dssp             EEEEEETTTTEEEEEEH
T ss_pred             eEEEcccccceEEEecc
Confidence            99999999999999974


No 52 
>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=99.29  E-value=4.4e-09  Score=85.67  Aligned_cols=235  Identities=6%  Similarity=-0.046  Sum_probs=148.6

Q ss_pred             ceeEEEEcCCCCEEEEe-cCCCeEEEEECCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceee
Q 019006          102 AILDLHWTTDGSQIISA-SPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQT  180 (347)
Q Consensus       102 ~v~~~~~~~~~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~  180 (347)
                      .-.+++++++|+..++. +.++.+..++...................+++.+.+ .++++....+.+++++......+..
T Consensus        15 ~P~~vavd~dG~i~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~gvav~~~g-~i~v~d~~~~~i~~~~~~~~~~~~~   93 (260)
T d1rwia_          15 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAG-TVYVTDFNNRVVTLAAGSNNQTVLP   93 (260)
T ss_dssp             CEEEEEECTTCCEEEEECSSSCEEEEEC----CEEECCCCSCCSCCCEEECTTC-CEEEEETTTEEEEECTTCSCCEECC
T ss_pred             CCCEEEEcCCCCEEEEEcCCCCEEEEEcCCCceEEEeccCCccCceEEEEcCCC-CEEEeeeeeceeeeeeeccceeeee
Confidence            34789999999966654 455777777654432221111111122334555543 5777777777777666554444433


Q ss_pred             cCCCCceEEEEEcCCCCeEEEEecCCcEEEEeCCCCceEEEecCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCC
Q 019006          181 FPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAP  260 (347)
Q Consensus       181 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~  260 (347)
                      .........++++++++.+++-..+..+..++............-.....++++.++++.+++...++.|..+|..... 
T Consensus        94 ~~~~~~p~~iavd~~g~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~~~v~~~~~~~i~~~d~~~~~-  172 (260)
T d1rwia_          94 FDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNN-  172 (260)
T ss_dssp             CCSCCSEEEEEECTTCCEEEEEGGGTEEEEECTTCSSCEECCCCSCCSCCEEEECTTCCEEEEEGGGTEEEEECTTTCC-
T ss_pred             eeeeeecccccccccceeEeeccccccccccccccceeeeeeecccCCcceeeecCCCCEeeeccccccccccccccce-
Confidence            3334567899999998877776667778888765543322222223446789999999988888888899999875321 


Q ss_pred             cCceeEEEeccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCCceeeEEecCCccCeeeEEEcCCCCEEEEecCCC
Q 019006          261 QNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDK  340 (347)
Q Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~  340 (347)
                          .......  . ......+++.++|.++++....+.|..++.............-.....+++++++.++++-..++
T Consensus       173 ----~~~~~~~--~-~~~p~gi~~d~~g~l~vsd~~~~~i~~~~~~~~~~~~~~~~~~~~P~~i~~d~~g~l~vad~~~~  245 (260)
T d1rwia_         173 ----QVVLPFT--D-ITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGND  245 (260)
T ss_dssp             ----EEECCCS--S-CCSEEEEEECTTCCEEEEETTTTEEEEECTTCSCCEECCCCSCCCEEEEEECTTCCEEEEEGGGT
T ss_pred             ----eeeeecc--c-cCCCccceeeeeeeeeeeecCCCEEEEEeCCCCeEEEEccCCCCCeEEEEEeCCCCEEEEECCCC
Confidence                1111111  1 13467888999999998888889999998765432221122234568999999999888877777


Q ss_pred             cEEee
Q 019006          341 QIYLG  345 (347)
Q Consensus       341 ~i~i~  345 (347)
                      .|+..
T Consensus       246 rI~~i  250 (260)
T d1rwia_         246 RVVKL  250 (260)
T ss_dssp             EEEEE
T ss_pred             EEEEE
Confidence            77754


No 53 
>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}
Probab=99.28  E-value=1e-10  Score=104.04  Aligned_cols=139  Identities=9%  Similarity=0.062  Sum_probs=101.5

Q ss_pred             EEEECCCCCeEEEeeCCCcEEEEeccCCCeeeEEEe-----CcccceeEEEEcCCCCEEEEec---------CCCeEEEE
Q 019006           62 TMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLK-----GHKNAILDLHWTTDGSQIISAS---------PDKTLRAW  127 (347)
Q Consensus        62 ~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~-----~h~~~v~~~~~~~~~~~l~s~~---------~dg~i~iw  127 (347)
                      .+.|.++++++..  .|+.+.+||..+.... ..+.     .|...|.++.|||||++|+.++         .++.+.+|
T Consensus        21 ~~~W~~d~~~~~~--~~~~~~~~~~~t~~~~-~~~~~~~~~~~~~~i~~~~~SpDg~~i~~~~~~~~~~r~s~~~~~~l~   97 (470)
T d2bgra1          21 SLRWISDHEYLYK--QENNILVFNAEYGNSS-VFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIY   97 (470)
T ss_dssp             CCEECSSSEEEEE--SSSCEEEEETTTCCEE-EEECTTTTTTSSSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEE
T ss_pred             CCEeCCCCEEEEE--cCCcEEEEECCCCCEE-EEEchhhhhhccCccceeEECCCCCEEEEEECCcceeeeccCceEEEE
Confidence            5679999987764  5788999999754332 3333     4457899999999999999874         35678999


Q ss_pred             ECCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeecCC-------------------CCceE
Q 019006          128 DVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPD-------------------KYQIT  188 (347)
Q Consensus       128 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~~-------------------~~~v~  188 (347)
                      |+.+++ +..+..+...+....++|++..++.  ..++.+.+|+...+...+....                   .....
T Consensus        98 d~~~~~-~~~l~~~~~~~~~~~~SPDG~~ia~--~~~~~l~~~~~~~g~~~~~t~~~~~~~~~~g~~d~~~~~~~~~~~~  174 (470)
T d2bgra1          98 DLNKRQ-LITEERIPNNTQWVTWSPVGHKLAY--VWNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYS  174 (470)
T ss_dssp             ETTTTE-ECCSSCCCTTEEEEEECSSTTCEEE--EETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSB
T ss_pred             ECCCCc-ccccccCCccccccccccCcceeeE--eecccceEEECCCCceeeeeeccCCCcccccccceeeeeeecCCcc
Confidence            999876 4556677778888889998876544  3567899999887765543321                   11245


Q ss_pred             EEEEcCCCCeEEEEecCC
Q 019006          189 AVSFSDASDKIYTGGIDN  206 (347)
Q Consensus       189 ~~~~~~~~~~l~~~~~dg  206 (347)
                      .+.|+|+++.++....|.
T Consensus       175 ~~~wSPDGk~ia~~~~d~  192 (470)
T d2bgra1         175 ALWWSPNGTFLAYAQFND  192 (470)
T ss_dssp             CEEECTTSSEEEEEEEEC
T ss_pred             ccEECCCCCccceeEecC
Confidence            678999999999876543


No 54 
>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]}
Probab=99.27  E-value=7.7e-09  Score=88.57  Aligned_cols=247  Identities=12%  Similarity=0.131  Sum_probs=138.3

Q ss_pred             ccceeEEEEcCCCCEEEEecCCCeEEEEECCCCceeeeee--ccCcceeEeecCCCCCCEEEEEc--CCCceEEEeCCC-
Q 019006          100 KNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMA--EHNSFVNSCCPSRRGPPLVVSGS--DDGTAKLWDMRQ-  174 (347)
Q Consensus       100 ~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~s~~--~d~~i~iwd~~~-  174 (347)
                      ...+..|+|++++++|+++.. +.+..|.+.....+....  ........+...+++..++++..  ..+.+..+.+.. 
T Consensus        39 ~~~~s~la~s~d~~~ly~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~p~~v~~~~~~~~~~v~~a~~~~~~v~~~~~~~~  117 (365)
T d1jofa_          39 DEPISWMTFDHERKNIYGAAM-KKWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKF  117 (365)
T ss_dssp             TCCCSEEEECTTSSEEEEEEB-TEEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSS
T ss_pred             CCCCCEEEEcCCCCEEEEEeC-CcEEEEEEeCCCCeEEEeeecCCCCcEEEEECCCCCEEEEEEecCCCCEEEEeEccCC
Confidence            345677999999999988754 567777665432222211  11122223444444443333322  234444443221 


Q ss_pred             -----------CCce----e--ecCCCCceEEEEEcCCCCeEEEEec-CCcEEEEeCCC-CceE--EEe--cCCCCceeE
Q 019006          175 -----------RGAI----Q--TFPDKYQITAVSFSDASDKIYTGGI-DNDVKVWDLRK-GEVS--MTL--QGHQDMITG  231 (347)
Q Consensus       175 -----------~~~~----~--~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~iwd~~~-~~~~--~~~--~~~~~~i~~  231 (347)
                                 ....    .  ..+....+.++.|+|++++++++.. ...|.+|+... +...  ...  .........
T Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~~~q~~~h~h~v~~sPdG~~l~v~d~g~d~v~~~~~~~~g~~~~~~~~~~~~~g~gPr~  197 (365)
T d1jofa_         118 AGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRW  197 (365)
T ss_dssp             CCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEE
T ss_pred             CCcceeEeeeecceecCcccCcccCCCCcceEEEECCCCCEEEEeeCCCCEEEEEEccCCCceeeccceeecCCCCceEE
Confidence                       1111    0  1122234778999999998887764 45788887643 2221  111  122345788


Q ss_pred             EEECCCCCEEEEEc-CCCcEEEEeCCCCCCcC-ceeEEEeccc----------cccccceEEEEECCCCCEEEEeeC---
Q 019006          232 MSLSPDGSYLLTNG-MDCKLCIWDMRPYAPQN-RCVKILEGHQ----------HNFEKNLLKCGWSPDGSKVTAGSS---  296 (347)
Q Consensus       232 v~~~~~~~~l~t~~-~d~~i~~wd~~~~~~~~-~~~~~~~~~~----------~~~~~~~~~~~~s~~g~~l~sgs~---  296 (347)
                      ++|+|+++++.+.. .+++|.+||+....... ..........          .........+.++|||++|+++..   
T Consensus       198 i~f~pdg~~~yv~~e~~~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~lyvsnr~~~  277 (365)
T d1jofa_         198 VAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANK  277 (365)
T ss_dssp             EEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESS
T ss_pred             EEECCCCceEEEeccCCCEEEEEEecCCCceEEEEeeeeccccccccccccccccccCCccceEECCCCCEEEEEcccCC
Confidence            99999999886554 57899999986432111 0111111000          001123456789999999987642   


Q ss_pred             ---CCeEEEEeCCCceee------EEecCCccCeeeEEEcC-CCCEEE-EecCCCcEEeecC
Q 019006          297 ---DRMVYIWDTTSRRIL------YKLPGHTGSVNESVFHA-TEPVIG-SCSSDKQIYLGEI  347 (347)
Q Consensus       297 ---dg~i~vwd~~~~~~~------~~~~~h~~~v~~~~~~~-~~~~l~-s~s~D~~i~i~~~  347 (347)
                         .+.|..|+......+      .......+....++|+| ++++|+ +...+++|.+|++
T Consensus       278 ~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~G~~p~~i~~~p~~G~~l~va~~~s~~v~v~~~  339 (365)
T d1jofa_         278 FELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRW  339 (365)
T ss_dssp             TTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEE
T ss_pred             CccceEEEEEEecCCCceeeEeEeeEEEcCCCCccEEEecCCCCCEEEEEeCCCCeEEEEEE
Confidence               234777776543222      12223345678899998 788665 4457899999863


No 55 
>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=99.20  E-value=3.7e-08  Score=80.12  Aligned_cols=219  Identities=13%  Similarity=0.162  Sum_probs=126.7

Q ss_pred             cCccccEEEEEECCCCCeEEEeeCCC-c--EEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEecC-CCeEEE--E
Q 019006           54 TGHQSAVYTMKFNPAGTVIASGSHDR-D--IFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASP-DKTLRA--W  127 (347)
Q Consensus        54 ~~h~~~V~~v~~~~~~~~l~s~~~d~-~--v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~-dg~i~i--w  127 (347)
                      ..+...+..-+|||||+.||-..... .  +.+.+..+  .....+..+........|+|+|+.++.... ++...+  +
T Consensus        35 ~~~~~~~~sP~wSPDGk~IAf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~  112 (269)
T d2hqsa1          35 HRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLAN--GAVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVM  112 (269)
T ss_dssp             EEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTT--CCEEEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEE
T ss_pred             ecCCCceeeeEECCCCCEEEEEEeeccCcceeeeeccc--CceeEEeeeecccccceecCCCCeeeEeeecCCccceeec
Confidence            34566788999999999998654433 2  44444433  333455667778889999999998886553 333222  2


Q ss_pred             ECCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEE--eCCCCCceeecCCCCceEEEEEcCCCCeEEEEecC
Q 019006          128 DVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLW--DMRQRGAIQTFPDKYQITAVSFSDASDKIYTGGID  205 (347)
Q Consensus       128 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iw--d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  205 (347)
                      ........ .....................+++...++...+|  ++...................++|++..++..+.+
T Consensus       113 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~  191 (269)
T d2hqsa1         113 DLASGQIR-QVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSN  191 (269)
T ss_dssp             ETTTCCEE-ECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCSSSEEEEEEECTTSSEEEEEEEC
T ss_pred             ccccccce-eeeeccccccccccccccccceecccccCCceEeeeecccccceeeecccccccccccccccceeEEEeec
Confidence            22222222 1212222222223344444456666666655444  55554444444445567778999999988876654


Q ss_pred             C-c--EEEEeCCCCceEEEecCCCCceeEEEECCCCCEEEEEc---CCCcEEEEeCCCCCCcCceeEEEeccccccccce
Q 019006          206 N-D--VKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNG---MDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNL  279 (347)
Q Consensus       206 g-~--i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~---~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~  279 (347)
                      + .  +.+.|...+..  .+..+........|+|||++|+-.+   ....|.++++....     ...+...    ...+
T Consensus       192 ~~~~~i~~~~~~~~~~--~~~~~~~~~~~p~~SPDG~~i~f~s~~~~~~~l~~~~~dg~~-----~~~lt~~----~g~~  260 (269)
T d2hqsa1         192 GGQQHIAKQDLATGGV--QVLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRF-----KARLPAT----DGQV  260 (269)
T ss_dssp             SSCEEEEEEETTTCCE--EECCCSSSCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCC-----EEECCCS----SSEE
T ss_pred             CCceeeeEeecccccc--eEeecCccccceEECCCCCEEEEEEcCCCCcEEEEEECCCCC-----EEEEeCC----CCcE
Confidence            4 3  45556555443  3333445567789999999887443   33468888876321     1222221    2346


Q ss_pred             EEEEECC
Q 019006          280 LKCGWSP  286 (347)
Q Consensus       280 ~~~~~s~  286 (347)
                      ...+|||
T Consensus       261 ~~p~WSP  267 (269)
T d2hqsa1         261 KFPAWSP  267 (269)
T ss_dssp             EEEEECC
T ss_pred             EeEEeCC
Confidence            6777888


No 56 
>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}
Probab=99.20  E-value=1e-07  Score=79.74  Aligned_cols=234  Identities=14%  Similarity=0.085  Sum_probs=142.9

Q ss_pred             ceeEEEEcCCCCEEEEecCCCeEEEEECCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCC----CceEEEeCCCCCc
Q 019006          102 AILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDD----GTAKLWDMRQRGA  177 (347)
Q Consensus       102 ~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d----~~i~iwd~~~~~~  177 (347)
                      .+..++|.++|++.++-..++.|..|+.+++.....+.........+++.+++ .++++...+    +.+...+......
T Consensus        41 ~lEG~~~D~~G~Ly~~D~~~g~I~ri~p~g~~~~~~~~~~~~~p~gla~~~dG-~l~va~~~~~~~~~~i~~~~~~~~~~  119 (319)
T d2dg1a1          41 QLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDG-RLFVCYLGDFKSTGGIFAATENGDNL  119 (319)
T ss_dssp             CEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTS-CEEEEECTTSSSCCEEEEECTTSCSC
T ss_pred             CcEeCEECCCCCEEEEECCCCEEEEEECCCCeEEEEEeCCCCCeeEEEECCCC-CEEEEecCCCccceeEEEEcCCCcee
Confidence            34578899999877777788999999887765554444444445566676665 455554322    2344444444433


Q ss_pred             eeecC---CCCceEEEEEcCCCCeEEEEec------CCcEEEEeCCCCceEEEecCCCCceeEEEECCCCCEE-EEEcCC
Q 019006          178 IQTFP---DKYQITAVSFSDASDKIYTGGI------DNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYL-LTNGMD  247 (347)
Q Consensus       178 ~~~~~---~~~~v~~~~~~~~~~~l~~~~~------dg~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l-~t~~~d  247 (347)
                      .....   .....+.+.++++|+..++...      .+.+..++...... ..+...-...+.++|+|+++.| ++-...
T Consensus       120 ~~~~~~~~~~~~~nd~~~d~~G~l~vtd~~~~~~~~~g~v~~~~~dg~~~-~~~~~~~~~pnGia~s~dg~~lyvad~~~  198 (319)
T d2dg1a1         120 QDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTV-TPIIQNISVANGIALSTDEKVLWVTETTA  198 (319)
T ss_dssp             EEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCE-EEEEEEESSEEEEEECTTSSEEEEEEGGG
T ss_pred             eeeccCCCcccCCcceeEEeccceeecccccccccCcceeEEEeccccee-EEEeeccceeeeeeeccccceEEEecccC
Confidence            32222   2345788999999986655322      12355555543322 2222222345789999999866 455667


Q ss_pred             CcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCCceeeEEec------CCccCe
Q 019006          248 CKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLP------GHTGSV  321 (347)
Q Consensus       248 ~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~~~~~------~h~~~v  321 (347)
                      +.|..||+..........................+++.++|++.++....+.|.+||. .++++.++.      ++...+
T Consensus       199 ~~I~~~d~~~~g~~~~~~~~~~~~~~~~~~~PdGl~vD~~G~l~Va~~~~g~V~~~~p-~G~~l~~i~~P~~~~~~~~~~  277 (319)
T d2dg1a1         199 NRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILIPGRDEGHMLRS  277 (319)
T ss_dssp             TEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEECTTGGGTCSCBC
T ss_pred             CceEEEEEcCCCceeccccceeeeccCCccceeeeeEcCCCCEEEEEcCCCEEEEECC-CCcEEEEEeCCCcCCCcCcee
Confidence            8999999864221111111100000000112456889999999888889999999996 577777664      344567


Q ss_pred             eeEEEcCCCCEEEEecC
Q 019006          322 NESVFHATEPVIGSCSS  338 (347)
Q Consensus       322 ~~~~~~~~~~~l~s~s~  338 (347)
                      .+++|.+....+..++.
T Consensus       278 ~~~~~~~~~~~~~~t~~  294 (319)
T d2dg1a1         278 THPQFIPGTNQLIICSN  294 (319)
T ss_dssp             CEEEECTTSCEEEEEEE
T ss_pred             eeEEEeCCCCEEEEEcC
Confidence            89999998877666544


No 57 
>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]}
Probab=99.19  E-value=8.4e-08  Score=80.10  Aligned_cols=241  Identities=10%  Similarity=0.062  Sum_probs=146.8

Q ss_pred             ceeEEEEcCCCCEEEEecC-------CCeEEEEECCCCceeeeeecc----CcceeEeecCCCCCCEEEEEcCCCceEEE
Q 019006          102 AILDLHWTTDGSQIISASP-------DKTLRAWDVETGKQIKKMAEH----NSFVNSCCPSRRGPPLVVSGSDDGTAKLW  170 (347)
Q Consensus       102 ~v~~~~~~~~~~~l~s~~~-------dg~i~iwd~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~~~s~~~d~~i~iw  170 (347)
                      ....++|.++|+.+++...       ++.|..||..++.........    ......+.+.+++. +++.+...+.+..+
T Consensus        19 g~EGpa~d~dG~ly~~~~~~~~~~~~~g~I~r~d~~~~~~~~~~~~~~~~~~g~P~Gl~~~~dg~-~l~vad~~~~i~~~   97 (314)
T d1pjxa_          19 GAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDAN-QLFVADMRLGLLVV   97 (314)
T ss_dssp             TCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSS-EEEEEETTTEEEEE
T ss_pred             CCeEeEEeCCCCEEEEECccccccccCCEEEEEECCCCcEEEEECCccccCCCcceeEEEeCCCC-EEEEEECCCeEEEE
Confidence            3466789999987776433       467888888876543322111    11233456666554 44445555667788


Q ss_pred             eCCCCCceeecC-CC----CceEEEEEcCCCCeEEEEec---------------CCcEEEEeCCCCceEEEecCCCCcee
Q 019006          171 DMRQRGAIQTFP-DK----YQITAVSFSDASDKIYTGGI---------------DNDVKVWDLRKGEVSMTLQGHQDMIT  230 (347)
Q Consensus       171 d~~~~~~~~~~~-~~----~~v~~~~~~~~~~~l~~~~~---------------dg~i~iwd~~~~~~~~~~~~~~~~i~  230 (347)
                      |........... ..    ...+.+++++++...++-..               .|.|+.++.. ++.... ...-..-+
T Consensus        98 ~~~g~~~~~~~~~~~g~~~~~pndl~~d~~G~lyvtd~~~~~~~~~~~~~~~~~~G~v~~~~~d-g~~~~~-~~~~~~pN  175 (314)
T d1pjxa_          98 QTDGTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQV-DTAFQFPN  175 (314)
T ss_dssp             ETTSCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEE-EEEESSEE
T ss_pred             eCCCcEEEEEeccccccccCCCcEEEECCCCCEEEecCccCcccccccceeccCCceEEEEeec-CceeEe-eCCcceee
Confidence            876443221111 11    13577899999877665321               2345555432 332222 22223357


Q ss_pred             EEEECCCCC-----EEEEEcCCCcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEEEEeeCCCeEEEEeC
Q 019006          231 GMSLSPDGS-----YLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDT  305 (347)
Q Consensus       231 ~v~~~~~~~-----~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~  305 (347)
                      .++|+|++.     .+++-+..+.|..||+...... ...+.+.............+++..+|++.++....+.|++||.
T Consensus       176 Gi~~~~d~d~~~~~lyv~d~~~~~i~~~d~~~~g~~-~~~~~~~~~~~~~~~~pdGiavD~~GnlyVa~~~~g~I~~~dp  254 (314)
T d1pjxa_         176 GIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKI-ENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGP  254 (314)
T ss_dssp             EEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEE-EEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECT
T ss_pred             eeEECCCCCcceeEEEEEeecccceEEeeccCcccc-ceeeEEEEccccccccceeeEEecCCcEEEEEcCCCEEEEEeC
Confidence            899988764     4455567788999987532111 0001111111111123456788999999888888899999999


Q ss_pred             CCceeeEEecCCccCeeeEEEcCCCC-EEEEecCCCcEEeec
Q 019006          306 TSRRILYKLPGHTGSVNESVFHATEP-VIGSCSSDKQIYLGE  346 (347)
Q Consensus       306 ~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~s~D~~i~i~~  346 (347)
                      +.++.+..+..+...+.+++|.|+++ +.+|.+.++.|+-.+
T Consensus       255 ~~g~~~~~i~~p~~~~t~~afg~d~~~lyVt~~~~g~i~~~~  296 (314)
T d1pjxa_         255 DGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFE  296 (314)
T ss_dssp             TCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred             CCCEEEEEEECCCCCEEEEEEeCCCCEEEEEECCCCcEEEEE
Confidence            98888777776667889999999986 667888889888765


No 58 
>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.18  E-value=1.1e-07  Score=78.03  Aligned_cols=233  Identities=12%  Similarity=0.216  Sum_probs=153.7

Q ss_pred             eeEEEEcCCCCEEEEecCCCeEEEEECCCCceeeeeeccCc------ceeEeecCCCCCCE-EEEEcCCCceEEEeCCCC
Q 019006          103 ILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNS------FVNSCCPSRRGPPL-VVSGSDDGTAKLWDMRQR  175 (347)
Q Consensus       103 v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~------~v~~~~~~~~~~~~-~~s~~~d~~i~iwd~~~~  175 (347)
                      -..|+++++++.+++-..+..|++||.+ ++.+..+.....      .............. ++..+.++.|..++.. +
T Consensus        25 P~gvavd~dg~i~VaD~~n~rI~v~d~~-G~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-g  102 (279)
T d1q7fa_          25 PSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQY-G  102 (279)
T ss_dssp             EEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEECTT-S
T ss_pred             ccEEEEcCCCCEEEEECCCCEEEEEeCC-CCEEEEecccCCCcccccccccccccccccccceeccCCcccccccccc-c
Confidence            4788999999888887788899999865 555554422110      11122222222223 3334455667777653 3


Q ss_pred             CceeecC--CCCceEEEEEcCCCCeEEEEecCCcEEEEeCCCCceEEEe--cCCCCceeEEEECCCCCEEEEEcCCCcEE
Q 019006          176 GAIQTFP--DKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTL--QGHQDMITGMSLSPDGSYLLTNGMDCKLC  251 (347)
Q Consensus       176 ~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~--~~~~~~i~~v~~~~~~~~l~t~~~d~~i~  251 (347)
                      .....+.  .......+++.+++..+++....+.+.+++.. ++....+  ..+......+++.++++.+++....+.|.
T Consensus       103 ~~~~~~~~~~~~~p~~~avd~~G~i~v~~~~~~~~~~~~~~-g~~~~~~g~~~~~~~~~~i~~d~~g~i~v~d~~~~~V~  181 (279)
T d1q7fa_         103 QFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVK  181 (279)
T ss_dssp             CEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEE
T ss_pred             cceeecCCCcccccceeccccCCcEEEEeeccceeeEeccC-CceeecccccccccccceeeeccceeEEeeecccccee
Confidence            4444432  23456788999988888877777888888854 5555544  34455678899999999888888889999


Q ss_pred             EEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEEEEeeC-CCeEEEEeCCCceeeEEecC--CccCeeeEEEcC
Q 019006          252 IWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSS-DRMVYIWDTTSRRILYKLPG--HTGSVNESVFHA  328 (347)
Q Consensus       252 ~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~-dg~i~vwd~~~~~~~~~~~~--h~~~v~~~~~~~  328 (347)
                      +||..     ...+..+...  ........+++.++|+.+++-+. ++.|.+|+. +++.+..+..  .......+++.|
T Consensus       182 ~~d~~-----G~~~~~~g~~--g~~~~P~giavD~~G~i~Vad~~~~~~v~~f~~-~G~~~~~~~~~~~~~~p~~vav~~  253 (279)
T d1q7fa_         182 VFNYE-----GQYLRQIGGE--GITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVALMD  253 (279)
T ss_dssp             EEETT-----CCEEEEESCT--TTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEET
T ss_pred             eeecC-----Cceeeeeccc--ccccCCcccccccCCeEEEEECCCCcEEEEECC-CCCEEEEEeCCCCCCCEeEEEEeC
Confidence            99864     2333333211  11234678899999998877554 457999985 5776666543  234678999999


Q ss_pred             CCCEEEEecCCCcEEeecC
Q 019006          329 TEPVIGSCSSDKQIYLGEI  347 (347)
Q Consensus       329 ~~~~l~s~s~D~~i~i~~~  347 (347)
                      ++.++++ +.++.|+++++
T Consensus       254 dG~l~V~-~~n~~v~~fr~  271 (279)
T d1q7fa_         254 DGSVVLA-SKDYRLYIYRY  271 (279)
T ss_dssp             TTEEEEE-ETTTEEEEEEC
T ss_pred             CCcEEEE-eCCCeEEEEEe
Confidence            9987665 57899999864


No 59 
>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=99.18  E-value=6.9e-08  Score=78.44  Aligned_cols=237  Identities=16%  Similarity=0.191  Sum_probs=141.7

Q ss_pred             cEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEecCC---CeEEEEECCCCceeeeeeccCcceeEeecCCCCCC
Q 019006           80 DIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPD---KTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPP  156 (347)
Q Consensus        80 ~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d---g~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~  156 (347)
                      .|++.|.++.  ....+..+...+.+-+|||||++||-...+   ..+.+.+...+.. ..+..+........+++++..
T Consensus        20 ~l~i~d~dG~--~~~~l~~~~~~~~sP~wSPDGk~IAf~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~spdg~~   96 (269)
T d2hqsa1          20 ELRVSDYDGY--NQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAV-RQVASFPRHNGAPAFSPDGSK   96 (269)
T ss_dssp             EEEEEETTSC--SCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EEEECCSSCEEEEEECTTSSE
T ss_pred             EEEEEcCCCC--CcEEEecCCCceeeeEECCCCCEEEEEEeeccCcceeeeecccCce-eEEeeeecccccceecCCCCe
Confidence            4666666543  233444456678889999999999865433   2466666665543 344445555666777787766


Q ss_pred             EEEEEcCCCceEEEeCC--CCCceeecCCCCceEEEEEcCCCCeEEE-EecCCc--EEEEeCCCCceEEEecCCCCceeE
Q 019006          157 LVVSGSDDGTAKLWDMR--QRGAIQTFPDKYQITAVSFSDASDKIYT-GGIDND--VKVWDLRKGEVSMTLQGHQDMITG  231 (347)
Q Consensus       157 ~~~s~~~d~~i~iwd~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~dg~--i~iwd~~~~~~~~~~~~~~~~i~~  231 (347)
                      ++.....++...++...  ..................+++++..++. ...++.  |.+.++..+.. ..+..+......
T Consensus        97 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~~~~~-~~~~~~~~~~~~  175 (269)
T d2hqsa1          97 LAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAP-QRITWEGSQNQD  175 (269)
T ss_dssp             EEEEECTTSSCEEEEEETTTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCC-EECCCSSSEEEE
T ss_pred             eeEeeecCCccceeecccccccceeeeeccccccccccccccccceecccccCCceEeeeecccccc-eeeecccccccc
Confidence            66655555554444332  2222233333334455566777665554 444554  55566655533 233334556677


Q ss_pred             EEECCCCCEEEEEcCC-CcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEEEEeeC---CCeEEEEeCCC
Q 019006          232 MSLSPDGSYLLTNGMD-CKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSS---DRMVYIWDTTS  307 (347)
Q Consensus       232 v~~~~~~~~l~t~~~d-~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~---dg~i~vwd~~~  307 (347)
                      ..|+|+++.++..+.+ +...+|.......   ....+..     ........|||||++|+..+.   ...|+++++..
T Consensus       176 ~~~spdg~~~~~~~~~~~~~~i~~~~~~~~---~~~~~~~-----~~~~~~p~~SPDG~~i~f~s~~~~~~~l~~~~~dg  247 (269)
T d2hqsa1         176 ADVSSDGKFMVMVSSNGGQQHIAKQDLATG---GVQVLSS-----TFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDG  247 (269)
T ss_dssp             EEECTTSSEEEEEEECSSCEEEEEEETTTC---CEEECCC-----SSSCEEEEECTTSSEEEEEEEETTEEEEEEEETTS
T ss_pred             cccccccceeEEEeecCCceeeeEeecccc---cceEeec-----CccccceEECCCCCEEEEEEcCCCCcEEEEEECCC
Confidence            8999999988876554 4444444332111   1122211     123456789999999985543   34689999987


Q ss_pred             ceeeEEecCCccCeeeEEEcCC
Q 019006          308 RRILYKLPGHTGSVNESVFHAT  329 (347)
Q Consensus       308 ~~~~~~~~~h~~~v~~~~~~~~  329 (347)
                      +.. .++....+.+...+|+|-
T Consensus       248 ~~~-~~lt~~~g~~~~p~WSP~  268 (269)
T d2hqsa1         248 RFK-ARLPATDGQVKFPAWSPY  268 (269)
T ss_dssp             CCE-EECCCSSSEEEEEEECCC
T ss_pred             CCE-EEEeCCCCcEEeEEeCCC
Confidence            654 567777788889999983


No 60 
>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=99.16  E-value=5.1e-08  Score=79.13  Aligned_cols=240  Identities=9%  Similarity=0.055  Sum_probs=149.3

Q ss_pred             ccccEEEEEECCCCCeEEE-eeCCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEECCCCce
Q 019006           56 HQSAVYTMKFNPAGTVIAS-GSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQ  134 (347)
Q Consensus        56 h~~~V~~v~~~~~~~~l~s-~~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~  134 (347)
                      +....+.|+++++|.+.++ .+..+.+..++..+.........+. .....++++++++.+++...++.+++++-.+...
T Consensus        12 ~~~~P~~vavd~dG~i~v~~~~~~~~i~~~~~~~~~~~~~~~~~~-~~p~gvav~~~g~i~v~d~~~~~i~~~~~~~~~~   90 (260)
T d1rwia_          12 FRLSPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGL-YQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQT   90 (260)
T ss_dssp             SCCCEEEEEECTTCCEEEEECSSSCEEEEEC----CEEECCCCSC-CSCCCEEECTTCCEEEEETTTEEEEECTTCSCCE
T ss_pred             CcCCCCEEEEcCCCCEEEEEcCCCCEEEEEcCCCceEEEeccCCc-cCceEEEEcCCCCEEEeeeeeceeeeeeecccee
Confidence            3456789999999997665 4556777777664433222222221 2357788999998888877777777766554444


Q ss_pred             eeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceee-cCCCCceEEEEEcCCCCeEEEEecCCcEEEEeC
Q 019006          135 IKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQT-FPDKYQITAVSFSDASDKIYTGGIDNDVKVWDL  213 (347)
Q Consensus       135 ~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~  213 (347)
                      +..... ......++..+.+ .++++-..+..+..++......... .........++++++++.+++...++.|..+|.
T Consensus        91 ~~~~~~-~~~p~~iavd~~g-~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~~~v~~~~~~~i~~~d~  168 (260)
T d1rwia_          91 VLPFDG-LNYPEGLAVDTQG-AVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEA  168 (260)
T ss_dssp             ECCCCS-CCSEEEEEECTTC-CEEEEEGGGTEEEEECTTCSSCEECCCCSCCSCCEEEECTTCCEEEEEGGGTEEEEECT
T ss_pred             eeeeee-eeecccccccccc-eeEeeccccccccccccccceeeeeeecccCCcceeeecCCCCEeeecccccccccccc
Confidence            332221 2233455555544 4666655566666666544332221 122235678899999988788788889999998


Q ss_pred             CCCceEEEecCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEEEE
Q 019006          214 RKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTA  293 (347)
Q Consensus       214 ~~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s  293 (347)
                      ..................|++.++|+.+++....+.|..++....     ....+...  . -.....++++++|.++++
T Consensus       169 ~~~~~~~~~~~~~~~p~gi~~d~~g~l~vsd~~~~~i~~~~~~~~-----~~~~~~~~--~-~~~P~~i~~d~~g~l~va  240 (260)
T d1rwia_         169 ESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGST-----TSTVLPFT--G-LNTPLAVAVDSDRTVYVA  240 (260)
T ss_dssp             TTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTTEEEEECTTCS-----CCEECCCC--S-CCCEEEEEECTTCCEEEE
T ss_pred             ccceeeeeeccccCCCccceeeeeeeeeeeecCCCEEEEEeCCCC-----eEEEEccC--C-CCCeEEEEEeCCCCEEEE
Confidence            755443332234455788999999998888888888888875421     11111111  1 124568889999988887


Q ss_pred             eeCCCeEEEEeCC
Q 019006          294 GSSDRMVYIWDTT  306 (347)
Q Consensus       294 gs~dg~i~vwd~~  306 (347)
                      -..++.|+.++..
T Consensus       241 d~~~~rI~~i~~~  253 (260)
T d1rwia_         241 DRGNDRVVKLTSL  253 (260)
T ss_dssp             EGGGTEEEEECCC
T ss_pred             ECCCCEEEEEeCC
Confidence            7777778777654


No 61 
>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]}
Probab=99.12  E-value=8.5e-08  Score=79.64  Aligned_cols=227  Identities=9%  Similarity=0.069  Sum_probs=144.8

Q ss_pred             cEEEEEECCCCCeEEEeeCCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEECCCCce-eee
Q 019006           59 AVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQ-IKK  137 (347)
Q Consensus        59 ~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~-~~~  137 (347)
                      .+..++++|+|+++++...+++|+.|+..+...   .+......+.+++|+++|+++++...++.+..|+...... ...
T Consensus        29 ~~e~iAv~pdG~l~vt~~~~~~I~~i~p~g~~~---~~~~~~~~~~gla~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~  105 (302)
T d2p4oa1          29 FLENLASAPDGTIFVTNHEVGEIVSITPDGNQQ---IHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVET  105 (302)
T ss_dssp             CEEEEEECTTSCEEEEETTTTEEEEECTTCCEE---EEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEE
T ss_pred             CcCCEEECCCCCEEEEeCCCCEEEEEeCCCCEE---EEEcCCCCcceEEEcCCCCeEEEecCCceEEEEEecccccceee
Confidence            578999999999999999999999988765433   3344556789999999999988888888888887654321 112


Q ss_pred             ee--ccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeec-----------CCCCceEEEEEcCCCCeEEEEec
Q 019006          138 MA--EHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTF-----------PDKYQITAVSFSDASDKIYTGGI  204 (347)
Q Consensus       138 ~~--~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~-----------~~~~~v~~~~~~~~~~~l~~~~~  204 (347)
                      +.  ......+.+.+.+.+ .++++-+.++.+..+|...+......           ........+.++. +..+++.+.
T Consensus       106 ~~~~~~~~~~n~i~~~~~g-~~~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ngi~~~~-~~l~~~~~~  183 (302)
T d2p4oa1         106 LLTLPDAIFLNGITPLSDT-QYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFG-NFLYVSNTE  183 (302)
T ss_dssp             EEECTTCSCEEEEEESSSS-EEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEET-TEEEEEETT
T ss_pred             ccccCCccccceeEEccCC-CEEeeccccccceeeeccCCcceeEecCCccceeeccCcccccccccccC-CceeeecCC
Confidence            21  123345556665554 56777777788888887654321110           1112345566653 334456667


Q ss_pred             CCcEEEEeCCCCceEE--EecCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEeccccccccceEEE
Q 019006          205 DNDVKVWDLRKGEVSM--TLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKC  282 (347)
Q Consensus       205 dg~i~iwd~~~~~~~~--~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (347)
                      .+.|+.++........  ...........+++.++|++.++...++.|..++..     .......... .. ......+
T Consensus       184 ~~~i~~~~~~~~~~~~~~~~~~~~~~pdgia~d~dG~l~va~~~~~~V~~i~p~-----G~~~~~~~~~-~~-~~~pt~v  256 (302)
T d2p4oa1         184 KMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-----RSTTIIAQAE-QG-VIGSTAV  256 (302)
T ss_dssp             TTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEEEECBTTCCEEEECTT-----CCEEEEECGG-GT-CTTEEEE
T ss_pred             CCeEEeccccccccccccccccCCCCCcceEECCCCCEEEEEcCCCcEEEECCC-----CCEEEEEecC-CC-CCCceEE
Confidence            8889888876532211  111122346789999999988888888889888753     2211111111 11 1346788


Q ss_pred             EE---CCCCCEEEEeeCC
Q 019006          283 GW---SPDGSKVTAGSSD  297 (347)
Q Consensus       283 ~~---s~~g~~l~sgs~d  297 (347)
                      +|   ++|++.|+.++..
T Consensus       257 afg~~~~D~~~Lyvtt~~  274 (302)
T d2p4oa1         257 AFGQTEGDCTAIYVVTNG  274 (302)
T ss_dssp             EECCSTTTTTEEEEEECT
T ss_pred             EEcCCCCCCCEEEEECCC
Confidence            99   6788888766554


No 62 
>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]}
Probab=99.10  E-value=2.1e-07  Score=77.20  Aligned_cols=224  Identities=11%  Similarity=0.080  Sum_probs=146.7

Q ss_pred             ceeEEEEcCCCCEEEEecCCCeEEEEECCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCc----
Q 019006          102 AILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGA----  177 (347)
Q Consensus       102 ~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~----  177 (347)
                      .+..++++|||+++++...+++|..|+....  ...+......+..+++.+++ .++++...++.+..++......    
T Consensus        29 ~~e~iAv~pdG~l~vt~~~~~~I~~i~p~g~--~~~~~~~~~~~~gla~~~dG-~l~v~~~~~~~~~~~~~~~~~~~~~~  105 (302)
T d2p4oa1          29 FLENLASAPDGTIFVTNHEVGEIVSITPDGN--QQIHATVEGKVSGLAFTSNG-DLVATGWNADSIPVVSLVKSDGTVET  105 (302)
T ss_dssp             CEEEEEECTTSCEEEEETTTTEEEEECTTCC--EEEEEECSSEEEEEEECTTS-CEEEEEECTTSCEEEEEECTTSCEEE
T ss_pred             CcCCEEECCCCCEEEEeCCCCEEEEEeCCCC--EEEEEcCCCCcceEEEcCCC-CeEEEecCCceEEEEEecccccceee
Confidence            4678899999999999999999988886543  23344455667778887775 5778888888888887653321    


Q ss_pred             eeecCCCCceEEEEEcCCCCeEEEEecCCcEEEEeCCCCceEEEecC----------CCCceeEEEECCCCCEEEEEcCC
Q 019006          178 IQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQG----------HQDMITGMSLSPDGSYLLTNGMD  247 (347)
Q Consensus       178 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~----------~~~~i~~v~~~~~~~~l~t~~~d  247 (347)
                      +...+.....+.+.+.++++.+++.+.++.+..+|...+........          .......+.+.. +..+++....
T Consensus       106 ~~~~~~~~~~n~i~~~~~g~~~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ngi~~~~-~~l~~~~~~~  184 (302)
T d2p4oa1         106 LLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFG-NFLYVSNTEK  184 (302)
T ss_dssp             EEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEET-TEEEEEETTT
T ss_pred             ccccCCccccceeEEccCCCEEeeccccccceeeeccCCcceeEecCCccceeeccCcccccccccccC-CceeeecCCC
Confidence            22233445678899999998888888888999999887654332211          112345666653 3445566677


Q ss_pred             CcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCCcee-eEEecCCccCeeeEEE
Q 019006          248 CKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRI-LYKLPGHTGSVNESVF  326 (347)
Q Consensus       248 ~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~-~~~~~~h~~~v~~~~~  326 (347)
                      +.|..++......... .......     .....++++++|.+.++...++.|..++...+.. +......-...+.++|
T Consensus       185 ~~i~~~~~~~~~~~~~-~~~~~~~-----~~pdgia~d~dG~l~va~~~~~~V~~i~p~G~~~~~~~~~~~~~~pt~vaf  258 (302)
T d2p4oa1         185 MLLLRIPVDSTDKPGE-PEIFVEQ-----TNIDDFAFDVEGNLYGATHIYNSVVRIAPDRSTTIIAQAEQGVIGSTAVAF  258 (302)
T ss_dssp             TEEEEEEBCTTSCBCC-CEEEEES-----CCCSSEEEBTTCCEEEECBTTCCEEEECTTCCEEEEECGGGTCTTEEEEEE
T ss_pred             CeEEeccccccccccc-cccccCC-----CCCcceEECCCCCEEEEEcCCCcEEEECCCCCEEEEEecCCCCCCceEEEE
Confidence            8888888764322111 1111111     1234578999999988888899999998764432 2333333345789999


Q ss_pred             ---cCCCCEEEE
Q 019006          327 ---HATEPVIGS  335 (347)
Q Consensus       327 ---~~~~~~l~s  335 (347)
                         +++++.|..
T Consensus       259 g~~~~D~~~Lyv  270 (302)
T d2p4oa1         259 GQTEGDCTAIYV  270 (302)
T ss_dssp             CCSTTTTTEEEE
T ss_pred             cCCCCCCCEEEE
Confidence               667775543


No 63 
>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]}
Probab=99.10  E-value=4.5e-08  Score=83.66  Aligned_cols=249  Identities=9%  Similarity=0.012  Sum_probs=143.5

Q ss_pred             cccEEEEEECCCCCeEEEeeCCCcEEEEeccCCCeeeEEE-eCcccceeEEEEcCCCCEE--EEec-CCCeEEEEECCCC
Q 019006           57 QSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVL-KGHKNAILDLHWTTDGSQI--ISAS-PDKTLRAWDVETG  132 (347)
Q Consensus        57 ~~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~l--~s~~-~dg~i~iwd~~~~  132 (347)
                      ...+.-|+|+|++++|.++.. +.+..|.+..+....... .........+.++++++.+  +++. ..+.+..+.+...
T Consensus        39 ~~~~s~la~s~d~~~ly~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~p~~v~~~~~~~~~~v~~a~~~~~~v~~~~~~~~  117 (365)
T d1jofa_          39 DEPISWMTFDHERKNIYGAAM-KKWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKF  117 (365)
T ss_dssp             TCCCSEEEECTTSSEEEEEEB-TEEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSS
T ss_pred             CCCCCEEEEcCCCCEEEEEeC-CcEEEEEEeCCCCeEEEeeecCCCCcEEEEECCCCCEEEEEEecCCCCEEEEeEccCC
Confidence            344556999999999987765 567778775443322111 1112234566778888743  3332 2355555443221


Q ss_pred             -ce-----------ee-e----eeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCcee------ecCCCCceEE
Q 019006          133 -KQ-----------IK-K----MAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQ------TFPDKYQITA  189 (347)
Q Consensus       133 -~~-----------~~-~----~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~------~~~~~~~v~~  189 (347)
                       ..           .. .    .......+..+.+++++..++++......|.+|+......+.      ..........
T Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~~~q~~~h~h~v~~sPdG~~l~v~d~g~d~v~~~~~~~~g~~~~~~~~~~~~~g~gPr~  197 (365)
T d1jofa_         118 AGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRW  197 (365)
T ss_dssp             CCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEE
T ss_pred             CCcceeEeeeecceecCcccCcccCCCCcceEEEECCCCCEEEEeeCCCCEEEEEEccCCCceeeccceeecCCCCceEE
Confidence             10           00 0    011223456788888887677766666788888765433221      1223456888


Q ss_pred             EEEcCCCCeEEEEe-cCCcEEEEeCCCCceE--EEec-----------------CCCCceeEEEECCCCCEEEEEcC---
Q 019006          190 VSFSDASDKIYTGG-IDNDVKVWDLRKGEVS--MTLQ-----------------GHQDMITGMSLSPDGSYLLTNGM---  246 (347)
Q Consensus       190 ~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~--~~~~-----------------~~~~~i~~v~~~~~~~~l~t~~~---  246 (347)
                      +.|+|+++++++.. .+++|.+|++...+..  ....                 .+......+.++|+|++|+++..   
T Consensus       198 i~f~pdg~~~yv~~e~~~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~lyvsnr~~~  277 (365)
T d1jofa_         198 VAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANK  277 (365)
T ss_dssp             EEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESS
T ss_pred             EEECCCCceEEEeccCCCEEEEEEecCCCceEEEEeeeeccccccccccccccccccCCccceEECCCCCEEEEEcccCC
Confidence            99999999887655 5788999998655321  1110                 01112457899999999988742   


Q ss_pred             ---CCcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECC-CCCEEEEe-eCCCeEEEEeCCCc
Q 019006          247 ---DCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSP-DGSKVTAG-SSDRMVYIWDTTSR  308 (347)
Q Consensus       247 ---d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-~g~~l~sg-s~dg~i~vwd~~~~  308 (347)
                         ...|..|++................  ..-.....++++| +|++|+++ ..++.|.+|+....
T Consensus       278 ~~~~~~i~~~~~~~~g~~~~~~~~~~~~--~~G~~p~~i~~~p~~G~~l~va~~~s~~v~v~~~~~~  342 (365)
T d1jofa_         278 FELQGYIAGFKLRDCGSIEKQLFLSPTP--TSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE  342 (365)
T ss_dssp             TTSCCEEEEEEECTTSCEEEEEEEEECS--SCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred             CccceEEEEEEecCCCceeeEeEeeEEE--cCCCCccEEEecCCCCCEEEEEeCCCCeEEEEEEeCC
Confidence               2237777765422111111111100  0012345577898 89987665 56789999976544


No 64 
>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.08  E-value=6.7e-07  Score=73.13  Aligned_cols=237  Identities=15%  Similarity=0.266  Sum_probs=148.9

Q ss_pred             ccEEEEEECCCCCeEEEeeCCCcEEEEeccCCCeeeEEEeC------cccceeEEEEcCCC-CEEEE-ecCCCeEEEEEC
Q 019006           58 SAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKG------HKNAILDLHWTTDG-SQIIS-ASPDKTLRAWDV  129 (347)
Q Consensus        58 ~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~------h~~~v~~~~~~~~~-~~l~s-~~~dg~i~iwd~  129 (347)
                      .....|+++++|+++++-...+.|++|+..++..  ..+..      ....-..+++..+. ..+++ .+.++.|..++.
T Consensus        23 ~~P~gvavd~dg~i~VaD~~n~rI~v~d~~G~~~--~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~  100 (279)
T d1q7fa_          23 TEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFK--FQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQ  100 (279)
T ss_dssp             SCEEEEEECTTCCEEEEEGGGTEEEEECTTSCEE--EEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEECT
T ss_pred             CCccEEEEcCCCCEEEEECCCCEEEEEeCCCCEE--EEecccCCCcccccccccccccccccccceeccCCccccccccc
Confidence            3578999999999888877788899999865422  22211      11123455555543 34443 345567777775


Q ss_pred             CCCceeeeeecc-CcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeec---CCCCceEEEEEcCCCCeEEEEecC
Q 019006          130 ETGKQIKKMAEH-NSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTF---PDKYQITAVSFSDASDKIYTGGID  205 (347)
Q Consensus       130 ~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~d  205 (347)
                       .++....+... ......++..+.+ .++++....+.+.+++.. ++.+..+   ........++++++++.+++....
T Consensus       101 -~g~~~~~~~~~~~~~p~~~avd~~G-~i~v~~~~~~~~~~~~~~-g~~~~~~g~~~~~~~~~~i~~d~~g~i~v~d~~~  177 (279)
T d1q7fa_         101 -YGQFVRKFGATILQHPRGVTVDNKG-RIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRA  177 (279)
T ss_dssp             -TSCEEEEECTTTCSCEEEEEECTTS-CEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGG
T ss_pred             -cccceeecCCCcccccceeccccCC-cEEEEeeccceeeEeccC-CceeecccccccccccceeeeccceeEEeeeccc
Confidence             34444444221 2223344444443 466666666677777754 3334433   223457788899988888888888


Q ss_pred             CcEEEEeCCCCceEEEec--CCCCceeEEEECCCCCEEEEEcC-CCcEEEEeCCCCCCcCceeEEEeccccccccceEEE
Q 019006          206 NDVKVWDLRKGEVSMTLQ--GHQDMITGMSLSPDGSYLLTNGM-DCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKC  282 (347)
Q Consensus       206 g~i~iwd~~~~~~~~~~~--~~~~~i~~v~~~~~~~~l~t~~~-d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (347)
                      +.|++||.. ++...++.  +......+|++.++|+.+++-.. ++.|.+|+..     +..+..+.....  ......+
T Consensus       178 ~~V~~~d~~-G~~~~~~g~~g~~~~P~giavD~~G~i~Vad~~~~~~v~~f~~~-----G~~~~~~~~~~~--~~~p~~v  249 (279)
T d1q7fa_         178 HCVKVFNYE-GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQD-----GQLISALESKVK--HAQCFDV  249 (279)
T ss_dssp             TEEEEEETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTT-----SCEEEEEEESSC--CSCEEEE
T ss_pred             cceeeeecC-CceeeeecccccccCCcccccccCCeEEEEECCCCcEEEEECCC-----CCEEEEEeCCCC--CCCEeEE
Confidence            999999964 55555553  34456789999999997777544 4579999843     344444432211  1246788


Q ss_pred             EECCCCCEEEEeeCCCeEEEEeCCCc
Q 019006          283 GWSPDGSKVTAGSSDRMVYIWDTTSR  308 (347)
Q Consensus       283 ~~s~~g~~l~sgs~dg~i~vwd~~~~  308 (347)
                      ++.|||.+++ ++.++.|++|.....
T Consensus       250 av~~dG~l~V-~~~n~~v~~fr~~~~  274 (279)
T d1q7fa_         250 ALMDDGSVVL-ASKDYRLYIYRYVQL  274 (279)
T ss_dssp             EEETTTEEEE-EETTTEEEEEECSCC
T ss_pred             EEeCCCcEEE-EeCCCeEEEEEeeee
Confidence            8999997555 557889999987654


No 65 
>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]}
Probab=98.97  E-value=1.9e-06  Score=71.65  Aligned_cols=240  Identities=11%  Similarity=0.116  Sum_probs=136.7

Q ss_pred             ccEEEEEECCCCCeEEEeeC-------CCcEEEEeccCCCeeeEEE---eCcccceeEEEEcCCCCEEEEecCCCeEEEE
Q 019006           58 SAVYTMKFNPAGTVIASGSH-------DRDIFLWHVHGDCKNFMVL---KGHKNAILDLHWTTDGSQIISASPDKTLRAW  127 (347)
Q Consensus        58 ~~V~~v~~~~~~~~l~s~~~-------d~~v~~w~~~~~~~~~~~~---~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw  127 (347)
                      .....++|.|+|+++++...       ++.|..|+..+........   ......-..++|.++++.|+++.....+...
T Consensus        18 ~g~EGpa~d~dG~ly~~~~~~~~~~~~~g~I~r~d~~~~~~~~~~~~~~~~~~g~P~Gl~~~~dg~~l~vad~~~~i~~~   97 (314)
T d1pjxa_          18 PGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRLGLLVV   97 (314)
T ss_dssp             TTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTTEEEEE
T ss_pred             CCCeEeEEeCCCCEEEEECccccccccCCEEEEEECCCCcEEEEECCccccCCCcceeEEEeCCCCEEEEEECCCeEEEE
Confidence            34567789999998876433       4678888876443222111   1111234679999999988888777778888


Q ss_pred             ECCCCceeeeeeccC----cceeEeecCCCCCCEEEEEcC---------------CCceEEEeCCCCCceeecCCCCceE
Q 019006          128 DVETGKQIKKMAEHN----SFVNSCCPSRRGPPLVVSGSD---------------DGTAKLWDMRQRGAIQTFPDKYQIT  188 (347)
Q Consensus       128 d~~~~~~~~~~~~~~----~~v~~~~~~~~~~~~~~s~~~---------------d~~i~iwd~~~~~~~~~~~~~~~v~  188 (347)
                      +.+............    ...+++.+.+.+ .+.++-..               .|.+..++.. ++.......-...+
T Consensus        98 ~~~g~~~~~~~~~~~g~~~~~pndl~~d~~G-~lyvtd~~~~~~~~~~~~~~~~~~G~v~~~~~d-g~~~~~~~~~~~pN  175 (314)
T d1pjxa_          98 QTDGTFEEIAKKDSEGRRMQGCNDCAFDYEG-NLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAFQFPN  175 (314)
T ss_dssp             ETTSCEEECCSBCTTSCBCBCCCEEEECTTS-CEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEESSEE
T ss_pred             eCCCcEEEEEeccccccccCCCcEEEECCCC-CEEEecCccCcccccccceeccCCceEEEEeec-CceeEeeCCcceee
Confidence            876543221111111    113344554443 34333211               1122222221 11111111112345


Q ss_pred             EEEEcCCCC----eEE-EEecCCcEEEEeCCCCceE------EEecC-CCCceeEEEECCCCCEEEEEcCCCcEEEEeCC
Q 019006          189 AVSFSDASD----KIY-TGGIDNDVKVWDLRKGEVS------MTLQG-HQDMITGMSLSPDGSYLLTNGMDCKLCIWDMR  256 (347)
Q Consensus       189 ~~~~~~~~~----~l~-~~~~dg~i~iwd~~~~~~~------~~~~~-~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~  256 (347)
                      .++|++++.    .|+ +-+..+.|+.||+......      ..+.+ +......|++..+|+..++....+.|.+||..
T Consensus       176 Gi~~~~d~d~~~~~lyv~d~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~pdGiavD~~GnlyVa~~~~g~I~~~dp~  255 (314)
T d1pjxa_         176 GIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPD  255 (314)
T ss_dssp             EEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTT
T ss_pred             eeEECCCCCcceeEEEEEeecccceEEeeccCccccceeeEEEEccccccccceeeEEecCCcEEEEEcCCCEEEEEeCC
Confidence            788887764    344 4467788999987533221      12222 12235679999999988887778899999865


Q ss_pred             CCCCcCceeEEEeccccccccceEEEEECCCCCEE-EEeeCCCeEEEEeCCC
Q 019006          257 PYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKV-TAGSSDRMVYIWDTTS  307 (347)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l-~sgs~dg~i~vwd~~~  307 (347)
                      ..    .....+...    .....+++|.||++.| ++.+.+|.|+.+++..
T Consensus       256 ~g----~~~~~i~~p----~~~~t~~afg~d~~~lyVt~~~~g~i~~~~~~~  299 (314)
T d1pjxa_         256 GG----QPKMRIRCP----FEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR  299 (314)
T ss_dssp             CB----SCSEEEECS----SSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred             CC----EEEEEEECC----CCCEEEEEEeCCCCEEEEEECCCCcEEEEECCC
Confidence            32    222222221    1356789999999755 5667788999988653


No 66 
>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}
Probab=98.79  E-value=2.4e-05  Score=64.86  Aligned_cols=237  Identities=8%  Similarity=0.051  Sum_probs=136.5

Q ss_pred             ecCccccEEEEEECCCCCeEEEeeCCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEecCC----CeEEEEE
Q 019006           53 LTGHQSAVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPD----KTLRAWD  128 (347)
Q Consensus        53 ~~~h~~~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d----g~i~iwd  128 (347)
                      +......+..++|.++|++.++-...+.|+.|+..+... .............++++++|+++++...+    +.+...+
T Consensus        35 ~~~~~~~lEG~~~D~~G~Ly~~D~~~g~I~ri~p~g~~~-~~~~~~~~~~p~gla~~~dG~l~va~~~~~~~~~~i~~~~  113 (319)
T d2dg1a1          35 ISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEI-KRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAAT  113 (319)
T ss_dssp             EESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCE-EEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEEC
T ss_pred             eccCCcCcEeCEECCCCCEEEEECCCCEEEEEECCCCeE-EEEEeCCCCCeeEEEECCCCCEEEEecCCCccceeEEEEc
Confidence            333444567899999999888887889999998765432 22333444567899999999887765432    3344444


Q ss_pred             CCCCceeeeeecc--CcceeEeecCCCCCCEEEEEcC------CCceEEEeCCCCCceeecCCCCceEEEEEcCCCCeEE
Q 019006          129 VETGKQIKKMAEH--NSFVNSCCPSRRGPPLVVSGSD------DGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIY  200 (347)
Q Consensus       129 ~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~s~~~------d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  200 (347)
                      .............  ....+.+...+.+ .+.++...      .+.+..++...+........-...+.++|+++++.|+
T Consensus       114 ~~~~~~~~~~~~~~~~~~~nd~~~d~~G-~l~vtd~~~~~~~~~g~v~~~~~dg~~~~~~~~~~~~pnGia~s~dg~~ly  192 (319)
T d2dg1a1         114 ENGDNLQDIIEDLSTAYCIDDMVFDSKG-GFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLW  192 (319)
T ss_dssp             TTSCSCEEEECSSSSCCCEEEEEECTTS-CEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEE
T ss_pred             CCCceeeeeccCCCcccCCcceeEEecc-ceeecccccccccCcceeEEEecccceeEEEeeccceeeeeeeccccceEE
Confidence            4443332222111  1223445555554 34443221      1223333333222111112223457799999998775


Q ss_pred             EE-ecCCcEEEEeCCCC-ceEE-------EecCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEecc
Q 019006          201 TG-GIDNDVKVWDLRKG-EVSM-------TLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGH  271 (347)
Q Consensus       201 ~~-~~dg~i~iwd~~~~-~~~~-------~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~  271 (347)
                      .+ +..+.|+.||+... ....       .........-.|++.++|+..++....+.|.++|-.     ++.+..+..-
T Consensus       193 vad~~~~~I~~~d~~~~g~~~~~~~~~~~~~~~~~~~PdGl~vD~~G~l~Va~~~~g~V~~~~p~-----G~~l~~i~~P  267 (319)
T d2dg1a1         193 VTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNKR-----GYPIGQILIP  267 (319)
T ss_dssp             EEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECTT-----SCEEEEEECT
T ss_pred             EecccCCceEEEEEcCCCceeccccceeeeccCCccceeeeeEcCCCCEEEEEcCCCEEEEECCC-----CcEEEEEeCC
Confidence            54 56789999987632 1111       111111234679999999988888888999999843     3334443321


Q ss_pred             cc--ccccceEEEEECCCCCEEEEeeC
Q 019006          272 QH--NFEKNLLKCGWSPDGSKVTAGSS  296 (347)
Q Consensus       272 ~~--~~~~~~~~~~~s~~g~~l~sgs~  296 (347)
                      ..  .....+.+++|.+++..+++.+.
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~t~~  294 (319)
T d2dg1a1         268 GRDEGHMLRSTHPQFIPGTNQLIICSN  294 (319)
T ss_dssp             TGGGTCSCBCCEEEECTTSCEEEEEEE
T ss_pred             CcCCCcCceeeeEEEeCCCCEEEEEcC
Confidence            11  11224668889998877766543


No 67 
>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]}
Probab=98.62  E-value=7.8e-05  Score=60.95  Aligned_cols=224  Identities=9%  Similarity=0.064  Sum_probs=136.2

Q ss_pred             EEEcCCCCEE-EEecCCCeEEEEECCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeecC--
Q 019006          106 LHWTTDGSQI-ISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFP--  182 (347)
Q Consensus       106 ~~~~~~~~~l-~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~--  182 (347)
                      -.|++....| .+--..+.|..||..+++.. .+ .....+..+.+..++ .+++ ++.+ .+..+|..+++......  
T Consensus        23 p~wd~~~~~l~wvDi~~~~I~r~d~~~g~~~-~~-~~~~~~~~i~~~~dg-~l~v-a~~~-gl~~~d~~tg~~~~l~~~~   97 (295)
T d2ghsa1          23 PTFDPASGTAWWFNILERELHELHLASGRKT-VH-ALPFMGSALAKISDS-KQLI-ASDD-GLFLRDTATGVLTLHAELE   97 (295)
T ss_dssp             EEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EE-ECSSCEEEEEEEETT-EEEE-EETT-EEEEEETTTCCEEEEECSS
T ss_pred             CeEECCCCEEEEEECCCCEEEEEECCCCeEE-EE-ECCCCcEEEEEecCC-CEEE-EEeC-ccEEeecccceeeEEeeee
Confidence            4477644434 44446688988998877542 22 223344445544443 3444 4444 58889988776443221  


Q ss_pred             C---CCceEEEEEcCCCCeEEEEec----CCcEEEEeCCCCceEEEecCCCCceeEEEECCCCCEEE-EEcCCCcEEEEe
Q 019006          183 D---KYQITAVSFSDASDKIYTGGI----DNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLL-TNGMDCKLCIWD  254 (347)
Q Consensus       183 ~---~~~v~~~~~~~~~~~l~~~~~----dg~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~-t~~~d~~i~~wd  254 (347)
                      .   ...++.+.++++|+..++...    .+.-.+|.+..++....... -..-+.++|+++++.++ +-+..+.|..++
T Consensus        98 ~~~~~~~~nd~~vd~~G~iw~~~~~~~~~~~~g~l~~~~~g~~~~~~~~-~~~~Ng~~~s~d~~~l~~~dt~~~~I~~~~  176 (295)
T d2ghsa1          98 SDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKGKVTKLFAD-ISIPNSICFSPDGTTGYFVDTKVNRLMRVP  176 (295)
T ss_dssp             TTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETTEEEEEEEE-ESSEEEEEECTTSCEEEEEETTTCEEEEEE
T ss_pred             cCCCcccceeeEECCCCCEEEEeccccccccceeEeeecCCcEEEEeec-cCCcceeeecCCCceEEEeecccceeeEee
Confidence            1   235788999999986665432    23456666666654443332 23467899999998665 445677898888


Q ss_pred             CCCCCCc--CceeEEEeccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCCceeeEEecCCccCeeeEEEc-CCCC
Q 019006          255 MRPYAPQ--NRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNESVFH-ATEP  331 (347)
Q Consensus       255 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~-~~~~  331 (347)
                      +......  .........  .........+++..+|.+.++.-..+.|..||. .++++.++.-....+++++|. ++.+
T Consensus       177 ~d~~~~~~~~~~~~~~~~--~~~~g~pdG~~vD~~GnlWva~~~~g~V~~~dp-~G~~~~~i~lP~~~~T~~~FGG~d~~  253 (295)
T d2ghsa1         177 LDARTGLPTGKAEVFIDS--TGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQTTCPAFIGPDAS  253 (295)
T ss_dssp             BCTTTCCBSSCCEEEEEC--TTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCSBEEEEEEESTTSC
T ss_pred             ecccccccccceEEEecc--CcccccccceEEcCCCCEEeeeeCCCceEEecC-CCcEeeEecCCCCceEEEEEeCCCCC
Confidence            7532111  111111111  111234667788999998888878889999995 577777776555678999996 5544


Q ss_pred             -EEEEecC
Q 019006          332 -VIGSCSS  338 (347)
Q Consensus       332 -~l~s~s~  338 (347)
                       +++|++.
T Consensus       254 ~LyvTta~  261 (295)
T d2ghsa1         254 RLLVTSAR  261 (295)
T ss_dssp             EEEEEEBC
T ss_pred             EEEEEECC
Confidence             5565543


No 68 
>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.45  E-value=5.6e-05  Score=66.09  Aligned_cols=136  Identities=12%  Similarity=0.104  Sum_probs=84.7

Q ss_pred             EECCCCCeEEEeeCCCcEEEEeccCCCeeeEEEeCc---ccceeEEEEcCCCCEEEEe---------cCCCeEEEEECCC
Q 019006           64 KFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGH---KNAILDLHWTTDGSQIISA---------SPDKTLRAWDVET  131 (347)
Q Consensus        64 ~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h---~~~v~~~~~~~~~~~l~s~---------~~dg~i~iwd~~~  131 (347)
                      .|.+++.++. -..+|.|.+|+....... ..+..+   ...+....||||+++|+..         +..+.+.++|+.+
T Consensus        23 ~W~~~~~~~~-~~~~g~i~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~SpD~~~vl~~~~~~~~~r~s~~~~~~i~d~~~  100 (465)
T d1xfda1          23 KWISDTEFIY-REQKGTVRLWNVETNTST-VLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPH  100 (465)
T ss_dssp             CBSSSSCBCC-CCSSSCEEEBCGGGCCCE-EEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSS
T ss_pred             EEeCCCcEEE-EeCCCcEEEEECCCCCEE-EEEcCccccccccceeEECCCCCeEEEEEcccceeEeeccccEEEEEccC
Confidence            4667766553 356778999998644332 222222   2356778899999988765         3457889999988


Q ss_pred             Cceeee--eeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeecCCC--C-----------------ceEEE
Q 019006          132 GKQIKK--MAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDK--Y-----------------QITAV  190 (347)
Q Consensus       132 ~~~~~~--~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~~~~--~-----------------~v~~~  190 (347)
                      +....-  .......+....++|++..++...  ++.+.+.+...+..++.....  .                 .-..+
T Consensus       101 ~~~~~l~~~~~~~~~l~~~~wSPDG~~iafv~--~~nl~~~~~~~~~~~~lt~~g~~~~i~nG~~d~vyeee~~~~~~a~  178 (465)
T d1xfda1         101 GDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIF--ENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAH  178 (465)
T ss_dssp             CCCEECCCTTCCSCCCSBCCBCSSTTCEEEEE--TTEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEE
T ss_pred             CceeeccCccCCccccceeeeccCCceEEEEe--cceEEEEecCCCceEEEecccCcceeeccccchhhhhhhccccceE
Confidence            764322  112233344467788887765543  466888877665554433211  1                 12467


Q ss_pred             EEcCCCCeEEEEe
Q 019006          191 SFSDASDKIYTGG  203 (347)
Q Consensus       191 ~~~~~~~~l~~~~  203 (347)
                      .|+|+|+.|+...
T Consensus       179 ~WSPDgk~iaf~~  191 (465)
T d1xfda1         179 WWSPDGTRLAYAA  191 (465)
T ss_dssp             EECTTSSEEEEEE
T ss_pred             EECCCCCeEEEEE
Confidence            7999999988754


No 69 
>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.39  E-value=0.00011  Score=64.18  Aligned_cols=273  Identities=12%  Similarity=0.100  Sum_probs=141.0

Q ss_pred             cEEEEEECCCCCeEEEee---------CCCcEEEEeccCCCe-eeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEE
Q 019006           59 AVYTMKFNPAGTVIASGS---------HDRDIFLWHVHGDCK-NFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWD  128 (347)
Q Consensus        59 ~V~~v~~~~~~~~l~s~~---------~d~~v~~w~~~~~~~-~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd  128 (347)
                      .+....||||++.++...         ..+.+.++|+..... .+.........+....|||||+.||-.. ++.+.+.+
T Consensus        62 ~~~~~~~SpD~~~vl~~~~~~~~~r~s~~~~~~i~d~~~~~~~~l~~~~~~~~~l~~~~wSPDG~~iafv~-~~nl~~~~  140 (465)
T d1xfda1          62 RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIF-ENNIYYCA  140 (465)
T ss_dssp             TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEE-TTEEEEES
T ss_pred             ccceeEECCCCCeEEEEEcccceeEeeccccEEEEEccCCceeeccCccCCccccceeeeccCCceEEEEe-cceEEEEe
Confidence            566778999999877653         356788888854321 1111112233455678999999988765 56788887


Q ss_pred             CCCCceeeeeeccC-cc-----------------eeEeecCCCCCCEEEEEcCCCce-----------------------
Q 019006          129 VETGKQIKKMAEHN-SF-----------------VNSCCPSRRGPPLVVSGSDDGTA-----------------------  167 (347)
Q Consensus       129 ~~~~~~~~~~~~~~-~~-----------------v~~~~~~~~~~~~~~s~~~d~~i-----------------------  167 (347)
                      ..++...+...... ..                 -....++|++..+++.--.+..+                       
T Consensus       141 ~~~~~~~~lt~~g~~~~i~nG~~d~vyeee~~~~~~a~~WSPDgk~iaf~~~D~s~V~~~~~~~~~~~~~p~~~~~~Yp~  220 (465)
T d1xfda1         141 HVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPK  220 (465)
T ss_dssp             SSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCB
T ss_pred             cCCCceEEEecccCcceeeccccchhhhhhhccccceEEECCCCCeEEEEEecccccceeecccccccccceeeeeeccc
Confidence            76655433222111 11                 12344677766544433333333                       


Q ss_pred             ----------EEEeCCCCCcee-ecCC------CCceEEEEEcCCCCeEEEEecC----CcEEEEeCCCCceEEEecCCC
Q 019006          168 ----------KLWDMRQRGAIQ-TFPD------KYQITAVSFSDASDKIYTGGID----NDVKVWDLRKGEVSMTLQGHQ  226 (347)
Q Consensus       168 ----------~iwd~~~~~~~~-~~~~------~~~v~~~~~~~~~~~l~~~~~d----g~i~iwd~~~~~~~~~~~~~~  226 (347)
                                .++|+..+.... ..+.      ..-+..+.|.++++.++.....    ..|.++|..++++...+....
T Consensus       221 ~G~~np~~~l~v~d~~~~~~~~~~~~~~~~~~~~~y~~~~~W~~d~~~~~~~~nR~q~~~~i~~~d~~tg~~~~~~~e~~  300 (465)
T d1xfda1         221 AGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDES  300 (465)
T ss_dssp             TTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEEC
T ss_pred             cCCCCCceeEEEEecCCCcEEEEEeccCcCccccceeeeeEEcCCCeEEEEEEccccccceEEEEcCCCCcEEEEEEEcC
Confidence                      333443222111 1111      1125678899888765554322    258889999887655443221


Q ss_pred             -Cce----eEEEECCCCCEEE---EEcCC--CcEEEEeCCCCC--CcCceeEEEeccccccccceEE-EEECCCCCEEE-
Q 019006          227 -DMI----TGMSLSPDGSYLL---TNGMD--CKLCIWDMRPYA--PQNRCVKILEGHQHNFEKNLLK-CGWSPDGSKVT-  292 (347)
Q Consensus       227 -~~i----~~v~~~~~~~~l~---t~~~d--~~i~~wd~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~s~~g~~l~-  292 (347)
                       ..|    ....|+++|+.++   ..-.+  +.+...++....  ........+..  ..+  .|.. +.|+++++.|. 
T Consensus       301 ~~wv~~~~~~p~~~~dg~~~~fi~~se~~g~~~ly~~~~~~~~~~~~~~~~~~LT~--G~w--~V~~i~~~d~~~~~vyF  376 (465)
T d1xfda1         301 EAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITS--GDW--DVTKILAYDEKGNKIYF  376 (465)
T ss_dssp             SSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCC--SSS--CEEEEEEEETTTTEEEE
T ss_pred             CceEeccCCceeEccCCCeeEEEEeeeecccCceEEEEeccccccCCCceeEEecc--CCc--eEEEEEEEcCCCCEEEE
Confidence             111    3457899988543   22222  234444332110  11111111111  111  2333 46888887765 


Q ss_pred             EeeCC----CeEEEEeCCCceeeEEec---CCccCeeeEEEcCCCCEEEEe
Q 019006          293 AGSSD----RMVYIWDTTSRRILYKLP---GHTGSVNESVFHATEPVIGSC  336 (347)
Q Consensus       293 sgs~d----g~i~vwd~~~~~~~~~~~---~h~~~v~~~~~~~~~~~l~s~  336 (347)
                      ++..+    ..|+-.++..+.....+.   ........+.|+|++++++-.
T Consensus       377 ~a~~~~p~~~hly~v~l~g~~~~~~lt~~~~~~~~~~~~~~S~~~~y~v~~  427 (465)
T d1xfda1         377 LSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLLK  427 (465)
T ss_dssp             EESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEEE
T ss_pred             EEeCCCCCceEEEEEECCCCCcceeeccccCCCCCEEEEEECCCCCEEEEE
Confidence            44433    235544554433332222   234456799999999988733


No 70 
>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=98.04  E-value=0.00045  Score=55.22  Aligned_cols=68  Identities=18%  Similarity=0.217  Sum_probs=45.8

Q ss_pred             ECCC--CCeEEEeeCCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEec----CC--CeEEEEECCCCcee
Q 019006           65 FNPA--GTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISAS----PD--KTLRAWDVETGKQI  135 (347)
Q Consensus        65 ~~~~--~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~----~d--g~i~iwd~~~~~~~  135 (347)
                      .+|+  |+.+|-.+. +.|++.++.+.  ....+..+...+....|||||++|+-..    .+  ..|.+++..+++..
T Consensus         6 ~sPdi~G~~v~f~~~-~dl~~~d~~~g--~~~~Lt~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~~~g~~~   81 (281)
T d1k32a2           6 LNPDIHGDRIIFVCC-DDLWEHDLKSG--STRKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEIK   81 (281)
T ss_dssp             EEEEEETTEEEEEET-TEEEEEETTTC--CEEEEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEEE
T ss_pred             cCCCCCCCEEEEEeC-CcEEEEECCCC--CEEEEecCCCcccCEEECCCCCEEEEEEeeCCCCCceEEEEEEecCCceE
Confidence            4577  887765543 56777788643  3345666777888999999999988543    22  24667777766543


No 71 
>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]}
Probab=98.02  E-value=0.0021  Score=52.06  Aligned_cols=218  Identities=17%  Similarity=0.151  Sum_probs=128.6

Q ss_pred             EEEECCC-CCeEEEeeCCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEECCCCceeeeeec
Q 019006           62 TMKFNPA-GTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAE  140 (347)
Q Consensus        62 ~v~~~~~-~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~  140 (347)
                      +..|++. +.+..+=-..+.|..|+..+.......   ....+.++++.+++.+++++ .+ -+.++|..+++...-...
T Consensus        22 gp~wd~~~~~l~wvDi~~~~I~r~d~~~g~~~~~~---~~~~~~~i~~~~dg~l~va~-~~-gl~~~d~~tg~~~~l~~~   96 (295)
T d2ghsa1          22 GPTFDPASGTAWWFNILERELHELHLASGRKTVHA---LPFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVLTLHAEL   96 (295)
T ss_dssp             EEEEETTTTEEEEEEGGGTEEEEEETTTTEEEEEE---CSSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEEEEECS
T ss_pred             CCeEECCCCEEEEEECCCCEEEEEECCCCeEEEEE---CCCCcEEEEEecCCCEEEEE-eC-ccEEeecccceeeEEeee
Confidence            4567764 455555556778988987654322222   23467888998888776654 44 488899888765322211


Q ss_pred             c----CcceeEeecCCCCCCEEEEEcC----CCceEEEeCCCCCceeecCCCCceEEEEEcCCCCeEE-EEecCCcEEEE
Q 019006          141 H----NSFVNSCCPSRRGPPLVVSGSD----DGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIY-TGGIDNDVKVW  211 (347)
Q Consensus       141 ~----~~~v~~~~~~~~~~~~~~s~~~----d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~iw  211 (347)
                      .    ....++....+.+. +.++...    .+.-.+|.+..++.......-...+.++++++++.++ +-+..+.|+.|
T Consensus        97 ~~~~~~~~~nd~~vd~~G~-iw~~~~~~~~~~~~g~l~~~~~g~~~~~~~~~~~~Ng~~~s~d~~~l~~~dt~~~~I~~~  175 (295)
T d2ghsa1          97 ESDLPGNRSNDGRMHPSGA-LWIGTMGRKAETGAGSIYHVAKGKVTKLFADISIPNSICFSPDGTTGYFVDTKVNRLMRV  175 (295)
T ss_dssp             STTCTTEEEEEEEECTTSC-EEEEEEETTCCTTCEEEEEEETTEEEEEEEEESSEEEEEECTTSCEEEEEETTTCEEEEE
T ss_pred             ecCCCcccceeeEECCCCC-EEEEeccccccccceeEeeecCCcEEEEeeccCCcceeeecCCCceEEEeecccceeeEe
Confidence            1    12344555555543 3333211    1233455554444333333333467899999998765 45567889998


Q ss_pred             eCCCC------ce--EEEecCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEeccccccccceEEEE
Q 019006          212 DLRKG------EV--SMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCG  283 (347)
Q Consensus       212 d~~~~------~~--~~~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (347)
                      ++...      +.  ...+.+.......+++..+|++.++.-..+.|..||-.     ++.+..+.--    ...+.+++
T Consensus       176 ~~d~~~~~~~~~~~~~~~~~~~~g~pdG~~vD~~GnlWva~~~~g~V~~~dp~-----G~~~~~i~lP----~~~~T~~~  246 (295)
T d2ghsa1         176 PLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDTD-----GNHIARYEVP----GKQTTCPA  246 (295)
T ss_dssp             EBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECTT-----CCEEEEEECS----CSBEEEEE
T ss_pred             eecccccccccceEEEeccCcccccccceEEcCCCCEEeeeeCCCceEEecCC-----CcEeeEecCC----CCceEEEE
Confidence            86421      11  12223334557889999999987777677889999853     3344444321    13578888


Q ss_pred             EC-CCCCEEEEe
Q 019006          284 WS-PDGSKVTAG  294 (347)
Q Consensus       284 ~s-~~g~~l~sg  294 (347)
                      |- ||.+.|+..
T Consensus       247 FGG~d~~~LyvT  258 (295)
T d2ghsa1         247 FIGPDASRLLVT  258 (295)
T ss_dssp             EESTTSCEEEEE
T ss_pred             EeCCCCCEEEEE
Confidence            94 777666543


No 72 
>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=97.96  E-value=0.00036  Score=55.80  Aligned_cols=222  Identities=11%  Similarity=0.031  Sum_probs=113.2

Q ss_pred             EcCC--CCEEEEecCCCeEEEEECCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCC-----ceEEEeCCCCCceee
Q 019006          108 WTTD--GSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDG-----TAKLWDMRQRGAIQT  180 (347)
Q Consensus       108 ~~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~-----~i~iwd~~~~~~~~~  180 (347)
                      .+|+  |++++-.+ +|.|.+.|+.+++. ..+..+........++|++..++++...++     .|.+++...+...+.
T Consensus         6 ~sPdi~G~~v~f~~-~~dl~~~d~~~g~~-~~Lt~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~~~g~~~~l   83 (281)
T d1k32a2           6 LNPDIHGDRIIFVC-CDDLWEHDLKSGST-RKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEIKRI   83 (281)
T ss_dssp             EEEEEETTEEEEEE-TTEEEEEETTTCCE-EEEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEEEEC
T ss_pred             cCCCCCCCEEEEEe-CCcEEEEECCCCCE-EEEecCCCcccCEEECCCCCEEEEEEeeCCCCCceEEEEEEecCCceEEe
Confidence            5677  88887654 45688889987765 455556666677788888876665554333     366667666554433


Q ss_pred             cCCC-------CceEEEEEcCCCCeEEEEecC------CcEEEEeCCCCceEEEecCCCCceeEEEECCCCCEEEEEcCC
Q 019006          181 FPDK-------YQITAVSFSDASDKIYTGGID------NDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMD  247 (347)
Q Consensus       181 ~~~~-------~~v~~~~~~~~~~~l~~~~~d------g~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~~d  247 (347)
                      ....       .......|+|+++.++.....      ..+...+...+.....   +........+.+.+..++....+
T Consensus        84 t~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~  160 (281)
T d1k32a2          84 TYFSGKSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFVPL---NLGPATHILFADGRRVIGRNTFE  160 (281)
T ss_dssp             CCCCEEEETTEECSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGTEEEEC---CSCSCSEEEEETTEEEEEESCSC
T ss_pred             eecCCCccCccccccccccCCCCCEEEEEEccCCCccceeeeeecCCCceeEEe---cCCccceeeecCCCeEEEeeccc
Confidence            2211       234677899999988765332      1244455544433221   12222333333333333332221


Q ss_pred             Cc-----------EEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEEEEeeC--CCeEEEEeCCCceeeEEe
Q 019006          248 CK-----------LCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSS--DRMVYIWDTTSRRILYKL  314 (347)
Q Consensus       248 ~~-----------i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~--dg~i~vwd~~~~~~~~~~  314 (347)
                      ..           .......    ..........     ........++++. .+.....  ...|+++|+..++.. ++
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~-----~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~d~~g~~~~-~l  229 (281)
T d1k32a2         161 LPHWKGYRGGTRGKIWIEVN----SGAFKKIVDM-----STHVSSPVIVGHR-IYFITDIDGFGQIYSTDLDGKDLR-KH  229 (281)
T ss_dssp             CTTSTTCCSTTCCEEEEEEE----TTEEEEEECC-----SSCCEEEEEETTE-EEEEECTTSSCEEEEEETTSCSCE-EC
T ss_pred             cceeeeeccCCcceeeeecc----ccceeeccCC-----ccccceeeeeccc-cceecccccccceEEEeCCCCceE-Ee
Confidence            10           0011000    0000000000     1122233344443 2222222  346888898877654 44


Q ss_pred             cCCccCeeeEEEcCCCCEEEEecCCCcEEeecC
Q 019006          315 PGHTGSVNESVFHATEPVIGSCSSDKQIYLGEI  347 (347)
Q Consensus       315 ~~h~~~v~~~~~~~~~~~l~s~s~D~~i~i~~~  347 (347)
                      ..+. ......|+|+++.|+. ..++.|++.|+
T Consensus       230 t~~~-~~~~~~~SpDG~~I~f-~~~~~l~~~d~  260 (281)
T d1k32a2         230 TSFT-DYYPRHLNTDGRRILF-SKGGSIYIFNP  260 (281)
T ss_dssp             CCCC-SSCEEEEEESSSCEEE-EETTEEEEECT
T ss_pred             ecCC-CcccccCcCCCCEEEE-EeCCEEEEEEC
Confidence            3332 2233469999998875 34677888764


No 73 
>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]}
Probab=97.72  E-value=0.0092  Score=49.82  Aligned_cols=271  Identities=14%  Similarity=0.083  Sum_probs=131.6

Q ss_pred             EECCCCCeEEEeeCCC-----------cEEEEeccCC-CeeeEEE-eCcccceeEEEEcCCCCEEEEecCC-CeEEEEEC
Q 019006           64 KFNPAGTVIASGSHDR-----------DIFLWHVHGD-CKNFMVL-KGHKNAILDLHWTTDGSQIISASPD-KTLRAWDV  129 (347)
Q Consensus        64 ~~~~~~~~l~s~~~d~-----------~v~~w~~~~~-~~~~~~~-~~h~~~v~~~~~~~~~~~l~s~~~d-g~i~iwd~  129 (347)
                      ....+|++++.|+.+.           .+.+||...+ ....... ..|.......++.+++..++.|+.+ ..+.+||.
T Consensus        26 ~~~~~gkv~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~i~v~Gg~~~~~~~~yd~  105 (387)
T d1k3ia3          26 IEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDS  105 (387)
T ss_dssp             EETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEEG
T ss_pred             EEeeCCEEEEEEeecCcccCCCCCceeEEEEEECCCCcEeecCCCCCCcccceeEEEEecCCcEEEeecCCCcceeEecC
Confidence            3346788888777431           2678998643 2222222 2333334566788999999988765 57999998


Q ss_pred             CCCceeeeeec-cCcceeEeecCCCCCCEEEEEcCC------CceEEEeCCCCCceeecC---------CCC------ce
Q 019006          130 ETGKQIKKMAE-HNSFVNSCCPSRRGPPLVVSGSDD------GTAKLWDMRQRGAIQTFP---------DKY------QI  187 (347)
Q Consensus       130 ~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~s~~~d------~~i~iwd~~~~~~~~~~~---------~~~------~v  187 (347)
                      .+..-...-.. ....-...+...++ .+++.|+.+      ..+.+||..+..-...-.         ...      .-
T Consensus       106 ~~~~w~~~~~~~~~r~~~~~~~~~dG-~v~v~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~  184 (387)
T d1k3ia3         106 SSDSWIPGPDMQVARGYQSSATMSDG-RVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNH  184 (387)
T ss_dssp             GGTEEEECCCCSSCCSSCEEEECTTS-CEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTTCS
T ss_pred             ccCcccccccccccccccceeeecCC-ceeeeccccccccccceeeeecCCCCceeecCCCcccccccccccceeeccce
Confidence            87654221110 11111223333333 466666532      357889987654211100         000      00


Q ss_pred             EEEEEcCCCCeEEEEecCCcEEEEeCCCCceEEEe--cC----CCCc--eeEEEE-CCCCCEEEEEcCC--------CcE
Q 019006          188 TAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTL--QG----HQDM--ITGMSL-SPDGSYLLTNGMD--------CKL  250 (347)
Q Consensus       188 ~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~--~~----~~~~--i~~v~~-~~~~~~l~t~~~d--------~~i  250 (347)
                      ..+..-+++..+..+..++.+.++|..+......-  ..    +...  -.++.+ ..+++.++.++..        ...
T Consensus       185 ~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~GG~~~~~~~~~~~~~  264 (387)
T d1k3ia3         185 AWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNA  264 (387)
T ss_dssp             CCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCE
T ss_pred             eEEEEeCCCCEEEecCcCCcEEecCcccCcEeeccccccCcccCcccccccEEEeeccCCceEEEEeccCCCCCccccee
Confidence            11222334556666666677777777655432211  00    0000  112222 2345666666532        123


Q ss_pred             EEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEEEEeeCC-----------CeEEEEeCCCceeeEEecCC-c
Q 019006          251 CIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSD-----------RMVYIWDTTSRRILYKLPGH-T  318 (347)
Q Consensus       251 ~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~d-----------g~i~vwd~~~~~~~~~~~~h-~  318 (347)
                      .+.++...............  .............+||+.++.|+.+           ..+.+||..+.+-. .+... .
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~--~p~~r~~~~~~~~~dg~i~v~GG~~~~~~~~~~~~~~~ve~Ydp~~~~W~-~~~~~~~  341 (387)
T d1k3ia3         265 HIITLGEPGTSPNTVFASNG--LYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFY-KQNPNSI  341 (387)
T ss_dssp             EEEECCSTTSCCEEEECTTC--CSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEE-ECCCCSS
T ss_pred             ecccccccccCCCceeeccc--cccccccceeeeccCCeEEEECCcccCccCCCCcEeceEEEEECCCCeEE-ECCCCCC
Confidence            33433322111111111110  0111222344456899999998843           14788998776422 22110 0


Q ss_pred             cCe--eeEEEcCCCCEEEEecC
Q 019006          319 GSV--NESVFHATEPVIGSCSS  338 (347)
Q Consensus       319 ~~v--~~~~~~~~~~~l~s~s~  338 (347)
                      ...  ......+++++++.++.
T Consensus       342 ~R~~Hs~a~l~~dG~v~v~GG~  363 (387)
T d1k3ia3         342 VRVYHSISLLLPDGRVFNGGGG  363 (387)
T ss_dssp             CCCTTEEEEECTTSCEEEEECC
T ss_pred             cccceEEEEECCCCEEEEEeCC
Confidence            111  12335789999988884


No 74 
>d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]}
Probab=97.68  E-value=0.002  Score=54.04  Aligned_cols=192  Identities=12%  Similarity=0.144  Sum_probs=108.9

Q ss_pred             CCCEEEEe-cCCCeEEEEECCCCceeeeeec-cCcceeEeecCC-CCCCEEEEEcCC------------------CceEE
Q 019006          111 DGSQIISA-SPDKTLRAWDVETGKQIKKMAE-HNSFVNSCCPSR-RGPPLVVSGSDD------------------GTAKL  169 (347)
Q Consensus       111 ~~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~-~~~~v~~~~~~~-~~~~~~~s~~~d------------------~~i~i  169 (347)
                      ||++|+.. ..+..|.+-|+++.+..+.+.. .......+.... ....+++.++.+                  +.+.+
T Consensus        98 DGrylFVNDkan~RVAvIdl~~fkt~kIi~iPn~~~~HG~r~~~~p~T~YV~~~~e~~vP~pndg~~l~d~~~y~~~~t~  177 (459)
T d1fwxa2          98 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTA  177 (459)
T ss_dssp             EEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGG-EEEEEEE
T ss_pred             ceeEEEEEcCCCceEEEEECcceeeeEEEecCCCCCCceeecccCCCeEEEEccCccccccCCCCccccchhhcceEEEE
Confidence            68887655 4778999999998876443322 122223333222 223355544442                  22556


Q ss_pred             EeCCCCCceeecCCCCceEEEEEcCCCCeEEEEecCC---------------cEEEEe----------------------
Q 019006          170 WDMRQRGAIQTFPDKYQITAVSFSDASDKIYTGGIDN---------------DVKVWD----------------------  212 (347)
Q Consensus       170 wd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg---------------~i~iwd----------------------  212 (347)
                      +|..+.+......-......+.++++++++++.+.+.               .+.+++                      
T Consensus       178 ID~~tm~V~~QV~V~g~ld~~~~s~dGK~af~TsyNSE~g~~l~e~ta~e~D~i~V~n~~rie~av~~Gk~~eingV~VV  257 (459)
T d1fwxa2         178 VDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVV  257 (459)
T ss_dssp             EETTTTEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEE
T ss_pred             EecCCceEEEEeeeCCChhccccCCCCCEEEEEeccccCCcchhhcccccceEEEEechHHhHHhhhcCCcEEeCCceee
Confidence            7877766555444444566788999999988876431               133333                      


Q ss_pred             -CCCC---ceEEEecCCCCceeEEEECCCCCEEEEEc-CCCcEEEEeCCCCCCc-------CceeEEEeccccccccceE
Q 019006          213 -LRKG---EVSMTLQGHQDMITGMSLSPDGSYLLTNG-MDCKLCIWDMRPYAPQ-------NRCVKILEGHQHNFEKNLL  280 (347)
Q Consensus       213 -~~~~---~~~~~~~~~~~~i~~v~~~~~~~~l~t~~-~d~~i~~wd~~~~~~~-------~~~~~~~~~~~~~~~~~~~  280 (347)
                       .+..   .....+... .....+.++|||+++++++ .+.++.++|++.....       ..++.   +. ...--...
T Consensus       258 D~~~~~~~~v~~yIPVp-KsPHGV~vSPDGKyi~VaGKLs~tVSViD~~Ki~~~~~~~~~~~~~~~---~e-~elglgPL  332 (459)
T d1fwxa2         258 DGRKEASSLFTRYIPIA-NNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVV---AE-PELGLGPL  332 (459)
T ss_dssp             ECSGG--CSSEEEEEEE-SSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCC-GGGGEE---EC-CBCCSCEE
T ss_pred             cccccCCcceeEEEecC-CCCCceEECCCCCEEEEeCCcCCcEEEEEehhhhhhhcccCCccccEE---ee-cccCcCcc
Confidence             2210   011111111 2246789999999988776 4789999998632100       01110   00 00111245


Q ss_pred             EEEECCCCCEEEEeeCCCeEEEEeCCC
Q 019006          281 KCGWSPDGSKVTAGSSDRMVYIWDTTS  307 (347)
Q Consensus       281 ~~~~s~~g~~l~sgs~dg~i~vwd~~~  307 (347)
                      -.+|..+|.--.+---|.+|.-|++..
T Consensus       333 ht~fd~~g~aytslfids~v~kw~~~~  359 (459)
T d1fwxa2         333 HTAFDGRGNAYTSLFLDSQVVKWNIED  359 (459)
T ss_dssp             EEEECTTSEEEEEETTTTEEEEEEHHH
T ss_pred             ccccCCCceEEEEeeccceEEEEecch
Confidence            667888886555666899999999743


No 75 
>d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=97.64  E-value=0.009  Score=47.45  Aligned_cols=254  Identities=13%  Similarity=0.115  Sum_probs=156.0

Q ss_pred             CcEEEEeccCCCeeeE-EEeCcccceeEEEEcCCCCEEEEecCCCeEEEEECCCCceeeeeeccCcceeEeecCCCCCCE
Q 019006           79 RDIFLWHVHGDCKNFM-VLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPL  157 (347)
Q Consensus        79 ~~v~~w~~~~~~~~~~-~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~  157 (347)
                      ..|.+-|+.......+ ...+     -+.-.+|..+.|+.-+ ..++.++|+++.++++.+......+ -+.|..+.  .
T Consensus        45 ~~VvIidl~n~~~~~Rrpi~A-----dsAIMhP~~~IiALra-g~~LQiFnletK~klks~~~~e~Vv-fWkWis~~--~  115 (327)
T d1utca2          45 AQVVIIDMNDPSNPIRRPISA-----DSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVT-FWKWISLN--T  115 (327)
T ss_dssp             EEEEEEETTSTTSCEEEECCC-----SEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECSSCCC-EEEESSSS--E
T ss_pred             ceEEEEECCCCCcceecccch-----hhhhcCCCCcEEEEec-CCeEEEEehhHhhhhceEEcCCCcE-EEEecCCC--E
Confidence            4577778754332221 1111     2334678777776555 5689999999998888776655443 45554432  3


Q ss_pred             EEEEcCCCceEEEeCCCC-CceeecC-----CCCceEEEEEcCCCCeEEEEe---c----CCcEEEEeCCCCceEEEecC
Q 019006          158 VVSGSDDGTAKLWDMRQR-GAIQTFP-----DKYQITAVSFSDASDKIYTGG---I----DNDVKVWDLRKGEVSMTLQG  224 (347)
Q Consensus       158 ~~s~~~d~~i~iwd~~~~-~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~---~----dg~i~iwd~~~~~~~~~~~~  224 (347)
                      |+-.+ +..+.-|++... .+.+.+.     ...+|.....+++.++++..+   .    .|.+.+|..+.. ....+++
T Consensus       116 L~lVT-~taVYHW~~~g~s~P~k~fdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~i~G~mQLYS~er~-~sQ~ieG  193 (327)
T d1utca2         116 VALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEG  193 (327)
T ss_dssp             EEEEC-SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT-EEEEECC
T ss_pred             EEEEc-CCceEEEcccCCCCchhhhhhcccccCceEEEEEECCCCCEEEEEeEecCCCceeEEEEEEEeccC-cCccccc
Confidence            43333 457999998543 3443332     235788888899999876432   2    356788987643 4566777


Q ss_pred             CCCceeEEEECCC--CCEEEE----EcCCCcEEEEeCCCCCCcCc-e-eEE--EeccccccccceEEEEECCCCCEEEEe
Q 019006          225 HQDMITGMSLSPD--GSYLLT----NGMDCKLCIWDMRPYAPQNR-C-VKI--LEGHQHNFEKNLLKCGWSPDGSKVTAG  294 (347)
Q Consensus       225 ~~~~i~~v~~~~~--~~~l~t----~~~d~~i~~wd~~~~~~~~~-~-~~~--~~~~~~~~~~~~~~~~~s~~g~~l~sg  294 (347)
                      |...-..+.+.-+  ...|++    +...+.+.+.++........ . .+.  +.-......+-...+..|+....+..-
T Consensus       194 haa~F~~~~~~g~~~~~~lf~fa~r~~~~~kLhIiEig~~~~g~~~f~kk~vdi~fppea~~DFPvamqvs~kygiiyvi  273 (327)
T d1utca2         194 HAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLI  273 (327)
T ss_dssp             SEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSCCCTTCCCCCCEEEECCCCTTCTTCCEEEEEEETTTTEEEEE
T ss_pred             eeeeeEEEEcCCCCCCceEEEEEECCCCCcEEEEEEcCCCccCCCCCcceeEEEECCccccCCcEEEEEeeccCCEEEEE
Confidence            7544333333211  112222    12336888998864221111 1 111  111111123456678889999999999


Q ss_pred             eCCCeEEEEeCCCceeeEEecCCccCeeeEEEcCCCCEEEEecCCCcEE
Q 019006          295 SSDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIY  343 (347)
Q Consensus       295 s~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~  343 (347)
                      +.-|.|++||++++.+++.-+=....|...+-+....-++....+|.|.
T Consensus       274 TK~G~i~lyDleTgt~i~~nRIs~~~iF~~a~~~~~~Gi~~VNr~GqVl  322 (327)
T d1utca2         274 TKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVL  322 (327)
T ss_dssp             ETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEETTSEEE
T ss_pred             ecCcEEEEEEcccccEEEEeecCCCceEEeccCCCCceEEEECCCCeEE
Confidence            9999999999999999987666667777666677766777777888775


No 76 
>d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]}
Probab=97.57  E-value=0.016  Score=48.58  Aligned_cols=191  Identities=14%  Similarity=0.171  Sum_probs=114.2

Q ss_pred             CCEEEEEcCCCceEEEeCCCCCcee--ecCCCCceEEEEEc--CCCCeEEEEecCC------------------cEEEEe
Q 019006          155 PPLVVSGSDDGTAKLWDMRQRGAIQ--TFPDKYQITAVSFS--DASDKIYTGGIDN------------------DVKVWD  212 (347)
Q Consensus       155 ~~~~~s~~~d~~i~iwd~~~~~~~~--~~~~~~~v~~~~~~--~~~~~l~~~~~dg------------------~i~iwd  212 (347)
                      ..+++.-..+.+|-+.|++..+..+  .++....+-.+...  |...+++.++.+.                  .+..+|
T Consensus       100 rylFVNDkan~RVAvIdl~~fkt~kIi~iPn~~~~HG~r~~~~p~T~YV~~~~e~~vP~pndg~~l~d~~~y~~~~t~ID  179 (459)
T d1fwxa2         100 RFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVD  179 (459)
T ss_dssp             EEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGG-EEEEEEEEE
T ss_pred             eEEEEEcCCCceEEEEECcceeeeEEEecCCCCCCceeecccCCCeEEEEccCccccccCCCCccccchhhcceEEEEEe
Confidence            3466777788899999998877644  55665566666654  4455666665522                  256788


Q ss_pred             CCCCceEEEecCCCCceeEEEECCCCCEEEEEcCCC---------------cEEEEeCCCC---------CCcCceeEEE
Q 019006          213 LRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDC---------------KLCIWDMRPY---------APQNRCVKIL  268 (347)
Q Consensus       213 ~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~~d~---------------~i~~wd~~~~---------~~~~~~~~~~  268 (347)
                      ..+.+...++.-- .....+.++++|+++++.+.+.               .+.+++....         ... .-+..+
T Consensus       180 ~~tm~V~~QV~V~-g~ld~~~~s~dGK~af~TsyNSE~g~~l~e~ta~e~D~i~V~n~~rie~av~~Gk~~ei-ngV~VV  257 (459)
T d1fwxa2         180 ADKWEVAWQVLVS-GNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQEL-NGVKVV  257 (459)
T ss_dssp             TTTTEEEEEEEES-SCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEE-TTEEEE
T ss_pred             cCCceEEEEeeeC-CChhccccCCCCCEEEEEeccccCCcchhhcccccceEEEEechHHhHHhhhcCCcEEe-CCceee
Confidence            8887766655432 3456789999999999876432               1333332100         000 000111


Q ss_pred             ecccc---------ccccceEEEEECCCCCEEEEe-eCCCeEEEEeCCCce-----------eeEEecCCccCeeeEEEc
Q 019006          269 EGHQH---------NFEKNLLKCGWSPDGSKVTAG-SSDRMVYIWDTTSRR-----------ILYKLPGHTGSVNESVFH  327 (347)
Q Consensus       269 ~~~~~---------~~~~~~~~~~~s~~g~~l~sg-s~dg~i~vwd~~~~~-----------~~~~~~~h~~~v~~~~~~  327 (347)
                      .....         ........+..+|||++++++ ..+..+.|+|++.-.           .+..-....-.....+|.
T Consensus       258 D~~~~~~~~v~~yIPVpKsPHGV~vSPDGKyi~VaGKLs~tVSViD~~Ki~~~~~~~~~~~~~~~~e~elglgPLht~fd  337 (459)
T d1fwxa2         258 DGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFD  337 (459)
T ss_dssp             ECSGG--CSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCC-GGGGEEECCBCCSCEEEEEEC
T ss_pred             cccccCCcceeEEEecCCCCCceEECCCCCEEEEeCCcCCcEEEEEehhhhhhhcccCCccccEEeecccCcCccccccC
Confidence            11000         001223456789999998765 468899999986321           111112223345778898


Q ss_pred             CCCCEEEEecCCCcEEeecC
Q 019006          328 ATEPVIGSCSSDKQIYLGEI  347 (347)
Q Consensus       328 ~~~~~l~s~s~D~~i~i~~~  347 (347)
                      ..+.-..|-=-|.+|.-|++
T Consensus       338 ~~g~aytslfids~v~kw~~  357 (459)
T d1fwxa2         338 GRGNAYTSLFLDSQVVKWNI  357 (459)
T ss_dssp             TTSEEEEEETTTTEEEEEEH
T ss_pred             CCceEEEEeeccceEEEEec
Confidence            88865556668999988864


No 77 
>d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}
Probab=97.48  E-value=0.03  Score=49.54  Aligned_cols=146  Identities=15%  Similarity=0.078  Sum_probs=84.5

Q ss_pred             CCEEEEecCCCeEEEEECCCCceeeeeeccCccee-EeecC--CCCCCEEEEEc------CCCceEEEeCCCCCceeecC
Q 019006          112 GSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVN-SCCPS--RRGPPLVVSGS------DDGTAKLWDMRQRGAIQTFP  182 (347)
Q Consensus       112 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~-~~~~~--~~~~~~~~s~~------~d~~i~iwd~~~~~~~~~~~  182 (347)
                      +..|+.++.||.+.-.|.++++.+........... .....  -.. ..++.+.      .+|.|+-+|+++++.+..+.
T Consensus       115 ~~~i~~~~~~g~l~alda~tG~~~w~~~~~~~~~~~~~t~~p~v~~-~~vivg~~~~~~~~~G~v~a~D~~TG~~~W~~~  193 (571)
T d2ad6a1         115 AGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAK-DTVLMGCSGAELGVRGAVNAFDLKTGELKWRAF  193 (571)
T ss_dssp             TTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEET-TEEEEECBCGGGTCCCEEEEEETTTCCEEEEEE
T ss_pred             CCeEEEEeCCCcEEeeehhhhhhhccccccccccccceeecCeEeC-CeEEEeeccccccccCcEEEEECCCCcEEEEEe
Confidence            35678888999999999999988766532211100 00000  011 2334444      36789999999988765431


Q ss_pred             CC--------------------------------------Cc-eEEEEEcCCCCeEEEEec----------------CCc
Q 019006          183 DK--------------------------------------YQ-ITAVSFSDASDKIYTGGI----------------DND  207 (347)
Q Consensus       183 ~~--------------------------------------~~-v~~~~~~~~~~~l~~~~~----------------dg~  207 (347)
                      ..                                      .. -...++++....++.+..                ...
T Consensus       194 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gg~vW~~~s~D~~~g~~y~~tg~~~p~~~~~r~g~n~~s~s  273 (571)
T d2ad6a1         194 ATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMT  273 (571)
T ss_dssp             SSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTE
T ss_pred             ccCCcccccccccccccccccCcccccccccCCcccccCCCccccccccchhcCeeeeecccccCccccccccccccccc
Confidence            10                                      00 123456666666665443                235


Q ss_pred             EEEEeCCCCceEEEecCCCCceeE---------EEECCCCC---EEEEEcCCCcEEEEeCCCC
Q 019006          208 VKVWDLRKGEVSMTLQGHQDMITG---------MSLSPDGS---YLLTNGMDCKLCIWDMRPY  258 (347)
Q Consensus       208 i~iwd~~~~~~~~~~~~~~~~i~~---------v~~~~~~~---~l~t~~~d~~i~~wd~~~~  258 (347)
                      +.-.|.++++....++.....+..         ..+..+++   .++..+.+|.+.+.|..+.
T Consensus       274 vvAld~~TG~~~W~~q~~~~D~Wd~D~~~~~~l~~~~~~g~~~~~v~~~~k~G~l~vlDr~tG  336 (571)
T d2ad6a1         274 IWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENG  336 (571)
T ss_dssp             EEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTC
T ss_pred             eeeeeccchhheecccccCccccccccccccceeeeeccCccccceeeccccceEEEEecCCC
Confidence            777899999988777643322221         11222332   4567788888988887654


No 78 
>d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]}
Probab=97.28  E-value=0.026  Score=44.45  Aligned_cols=222  Identities=9%  Similarity=0.034  Sum_probs=132.6

Q ss_pred             eCcccceeEEEEcCCCCEEEEe-cCCCeEEEEECCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCC
Q 019006           97 KGHKNAILDLHWTTDGSQIISA-SPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQR  175 (347)
Q Consensus        97 ~~h~~~v~~~~~~~~~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~  175 (347)
                      ..+...+..|+|....+.|+-+ ..++.|+..+++.......+......+..++....+..+.++-...+.|.+.++...
T Consensus        32 ~~~~~~~~~ld~D~~~~~iywsd~~~~~I~~~~l~g~~~~~v~~~~~~~p~~iAvD~~~~~lY~~d~~~~~I~~~~~dg~  111 (263)
T d1npea_          32 HIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGT  111 (263)
T ss_dssp             EEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred             ccCCCcEEEEEEEeCCCEEEEEECCCCeEEEEEcccCCcEEEEEeccccccEEEEeccCCeEEEeccCCCEEEEEecCCc
Confidence            3344567889998877766654 466788888887654433332222345556665555667777777889999998765


Q ss_pred             CceeecCC-CCceEEEEEcCCCCeEEEEecC---CcEEEEeCCCCceEEEecCCCCceeEEEECCCCCEEEEE-cCCCcE
Q 019006          176 GAIQTFPD-KYQITAVSFSDASDKIYTGGID---NDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTN-GMDCKL  250 (347)
Q Consensus       176 ~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d---g~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~-~~d~~i  250 (347)
                      ........ ......++++|...+++.....   ..|.-.++............-....++++.+.++.|.-+ ...+.|
T Consensus       112 ~~~~l~~~~l~~p~~l~vdp~~g~ly~t~~~~~~~~I~r~~~dG~~~~~i~~~~~~~P~glaiD~~~~~lYw~d~~~~~I  191 (263)
T d1npea_         112 QRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRA  191 (263)
T ss_dssp             SCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEE
T ss_pred             eEEEEecccccCCcEEEEecccCcEEEeecCCCCcEEEEecCCCCCceeeeeecccccceEEEeecCcEEEEEeCCCCEE
Confidence            54333332 3568899999988877754322   235445665433222222223456789998877777554 566788


Q ss_pred             EEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEEEEe-eCCCeEEEEeCCCceeeEEec-CCccCeeeEEEcC
Q 019006          251 CIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAG-SSDRMVYIWDTTSRRILYKLP-GHTGSVNESVFHA  328 (347)
Q Consensus       251 ~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sg-s~dg~i~vwd~~~~~~~~~~~-~h~~~v~~~~~~~  328 (347)
                      ...|+...    .....+.+..     ....+++.  +.+|... ...+.|...|..+++.+..+. ........++..+
T Consensus       192 ~~~~~~g~----~~~~v~~~~~-----~P~~lav~--~~~lYwtd~~~~~I~~~~~~~g~~~~~~~~~~~~~~~gi~v~~  260 (263)
T d1npea_         192 ECLNPAQP----GRRKVLEGLQ-----YPFAVTSY--GKNLYYTDWKTNSVIAMDLAISKEMDTFHPHKQTRLYGITIAL  260 (263)
T ss_dssp             EEEETTEE----EEEEEEECCC-----SEEEEEEE--TTEEEEEETTTTEEEEEETTTTEEEEEECCSSCCCCCCEEEEC
T ss_pred             EEEECCCC----CeEEEECCCC-----CcEEEEEE--CCEEEEEECCCCEEEEEECCCCccceEECCCCCCCcceEEEeC
Confidence            88887521    1112223221     23455553  4555544 466789999998887765543 3334455666555


Q ss_pred             C
Q 019006          329 T  329 (347)
Q Consensus       329 ~  329 (347)
                      +
T Consensus       261 ~  261 (263)
T d1npea_         261 S  261 (263)
T ss_dssp             S
T ss_pred             C
Confidence            4


No 79 
>d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]}
Probab=97.21  E-value=0.065  Score=47.59  Aligned_cols=147  Identities=17%  Similarity=0.133  Sum_probs=86.6

Q ss_pred             CEEEEecCCCeEEEEECCCCceeeeeeccCccee-EeecCC-CCCCEEEEEcC------CCceEEEeCCCCCceeecCCC
Q 019006          113 SQIISASPDKTLRAWDVETGKQIKKMAEHNSFVN-SCCPSR-RGPPLVVSGSD------DGTAKLWDMRQRGAIQTFPDK  184 (347)
Q Consensus       113 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~-~~~~~~-~~~~~~~s~~~------d~~i~iwd~~~~~~~~~~~~~  184 (347)
                      .+|+.+..|+.+.-.|.++++.+..+........ .....+ --...++.|..      .|.|+-+|+++++.+-.+...
T Consensus       122 ~~v~~~t~dg~l~Alda~tG~~~w~~~~~d~~~~~~~t~~P~v~~~~vivg~~~~e~~~~G~v~A~Da~TG~~~W~~~t~  201 (596)
T d1w6sa_         122 ALILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYAT  201 (596)
T ss_dssp             CEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESS
T ss_pred             eEEEEEeCCCCeEeeccccCceeccccccccccccccccCCcEECCeEEEeeccccccccCceEEEECCCCcEEEEeecc
Confidence            4688899999999999999998877643211110 000000 00123444442      488999999998876543110


Q ss_pred             ---------------------------------------CceEEEEEcCCCCeEEEEecC----------------CcEE
Q 019006          185 ---------------------------------------YQITAVSFSDASDKIYTGGID----------------NDVK  209 (347)
Q Consensus       185 ---------------------------------------~~v~~~~~~~~~~~l~~~~~d----------------g~i~  209 (347)
                                                             ..-...++++..+.++.+..+                ..|.
T Consensus       202 ~~~~~~~~~~~~~~~~~~~g~~~~~~~tw~g~~~~~gg~~~W~~~s~D~~~~lvy~~tg~~~p~~~~~r~g~n~ys~siv  281 (596)
T d1w6sa_         202 GPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIF  281 (596)
T ss_dssp             SCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEE
T ss_pred             CCccccccccccccccccccccccccccCCCCceecCCCccccccccccCCCeeeccccccccccccccccccccccccc
Confidence                                                   012234566777776665432                3377


Q ss_pred             EEeCCCCceEEEecCCCCcee---------EEE-ECCCC---CEEEEEcCCCcEEEEeCCCCC
Q 019006          210 VWDLRKGEVSMTLQGHQDMIT---------GMS-LSPDG---SYLLTNGMDCKLCIWDMRPYA  259 (347)
Q Consensus       210 iwd~~~~~~~~~~~~~~~~i~---------~v~-~~~~~---~~l~t~~~d~~i~~wd~~~~~  259 (347)
                      -.|+++++....++.....+.         -+. ...+|   ..++....+|.+.++|..+.+
T Consensus       282 AlD~~TG~~~W~~Q~~~~D~Wd~d~~~~~~l~d~~~~~G~~~~~v~~~~k~G~~~vlDr~tG~  344 (596)
T d1w6sa_         282 GRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGA  344 (596)
T ss_dssp             EEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCC
T ss_pred             ccccccccccccccceeccccCCccccceeeeeccccccccccceeccccccceeeecCCCCc
Confidence            789999998776654221111         111 12234   357778888999999976543


No 80 
>d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.95  E-value=0.058  Score=42.44  Aligned_cols=239  Identities=10%  Similarity=0.047  Sum_probs=135.0

Q ss_pred             cEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEe-cCCCeEEEEECCCCce---eee-eeccCcceeEeecCCCC
Q 019006           80 DIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISA-SPDKTLRAWDVETGKQ---IKK-MAEHNSFVNSCCPSRRG  154 (347)
Q Consensus        80 ~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~~dg~i~iwd~~~~~~---~~~-~~~~~~~v~~~~~~~~~  154 (347)
                      .|+..++.+..  ...+......+.+++|++..++|+-. ..++.|+..++.....   ... +......+..++....+
T Consensus        11 ~I~~~~l~~~~--~~~~~~~~~~~~~id~d~~~~~lYw~D~~~~~I~~~~l~~~~~~~~~~~~~~~~~~~p~glAvD~~~   88 (266)
T d1ijqa1          11 EVRKMTLDRSE--YTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIH   88 (266)
T ss_dssp             SEEEEETTSCC--CEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTT
T ss_pred             eEEEEECCCCc--ceeeeCCCCceEEEEEEeCCCEEEEEECCCCEEEEEEecCCCCCcceEEEEeCCCCCcceEEEeecc
Confidence            46666765432  12222344567789998877776654 3556676666543211   111 11222233445555555


Q ss_pred             CCEEEEEcCCCceEEEeCCCCCceeecC-CCCceEEEEEcCCCCeEEEEe--cCCcEEEEeCCCCceEEEecCCCCceeE
Q 019006          155 PPLVVSGSDDGTAKLWDMRQRGAIQTFP-DKYQITAVSFSDASDKIYTGG--IDNDVKVWDLRKGEVSMTLQGHQDMITG  231 (347)
Q Consensus       155 ~~~~~s~~~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~i~~  231 (347)
                      ..+.++-...++|.+.++.......... .......++++|...+++...  ..+.|.-.++............-....+
T Consensus        89 ~~lY~~d~~~~~I~v~~~~g~~~~~~~~~~~~~P~~l~vd~~~g~ly~~~~~~~~~I~r~~~dGs~~~~l~~~~~~~p~g  168 (266)
T d1ijqa1          89 SNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNG  168 (266)
T ss_dssp             TEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEE
T ss_pred             ceEEEEecCCCEEEeEecCCceEEEEEcCCCCCcceEEEEcccCeEEEeccCCCcceeEeccCCCceecccccccceeeE
Confidence            6677777778899999987655433332 335678899998877776543  3456777777644333333333345788


Q ss_pred             EEECCCCCEEEEE-cCCCcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEEEEe-eCCCeEEEEeCCCce
Q 019006          232 MSLSPDGSYLLTN-GMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAG-SSDRMVYIWDTTSRR  309 (347)
Q Consensus       232 v~~~~~~~~l~t~-~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sg-s~dg~i~vwd~~~~~  309 (347)
                      +++.+.++.|.-+ ...+.|...|+....    ......... . ......+++.  +.+|... ..++.|+..+..++.
T Consensus       169 l~iD~~~~~lYw~d~~~~~I~~~~~dG~~----~~~~~~~~~-~-~~~p~~lav~--~~~ly~td~~~~~I~~~~~~~g~  240 (266)
T d1ijqa1         169 ITLDLLSGRLYWVDSKLHSISSIDVNGGN----RKTILEDEK-R-LAHPFSLAVF--EDKVFWTDIINEAIFSANRLTGS  240 (266)
T ss_dssp             EEEETTTTEEEEEETTTTEEEEEETTSCS----CEEEEECTT-T-TSSEEEEEEE--TTEEEEEETTTTEEEEEETTTCC
T ss_pred             EEeeccccEEEEecCCcCEEEEEECCCCC----EEEEEeCCC-c-ccccEEEEEE--CCEEEEEECCCCeEEEEECCCCc
Confidence            9999877766655 556788888875311    111121111 1 1123455544  3455444 467888888888877


Q ss_pred             eeEEecCCccCeeeE-EEcC
Q 019006          310 ILYKLPGHTGSVNES-VFHA  328 (347)
Q Consensus       310 ~~~~~~~h~~~v~~~-~~~~  328 (347)
                      ....+......+.++ .+||
T Consensus       241 ~~~~~~~~~~~p~~i~v~~~  260 (266)
T d1ijqa1         241 DVNLLAENLLSPEDMVLFHN  260 (266)
T ss_dssp             CCEEEECSCSCCCCEEEESG
T ss_pred             ceEEEEcCCCCceEEEEECC
Confidence            666665544444333 3454


No 81 
>d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}
Probab=96.81  E-value=0.15  Score=44.98  Aligned_cols=45  Identities=13%  Similarity=0.139  Sum_probs=32.5

Q ss_pred             CCCEEEEeeCCCeEEEEeCCCceeeEEecCCcc-CeeeEEEcCCCC
Q 019006          287 DGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTG-SVNESVFHATEP  331 (347)
Q Consensus       287 ~g~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~-~v~~~~~~~~~~  331 (347)
                      .+.+++.|+.||.++-+|.++|+.+.+++-... .-.-+.|..+++
T Consensus       474 agglVf~G~~dg~l~A~Da~tGe~lW~~~l~~~~~a~P~ty~~dGk  519 (571)
T d2ad6a1         474 KGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSFKGK  519 (571)
T ss_dssp             TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTE
T ss_pred             cCCEEEEECCCCeEEEEECCCCcEEEEEECCCCceecceEEEECCE
Confidence            567888899999999999999999987653221 112245666775


No 82 
>d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]}
Probab=96.71  E-value=0.18  Score=44.64  Aligned_cols=46  Identities=17%  Similarity=0.286  Sum_probs=33.2

Q ss_pred             CCCCEEEEeeCCCeEEEEeCCCceeeEEecCCccCe-eeEEEcCCCC
Q 019006          286 PDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSV-NESVFHATEP  331 (347)
Q Consensus       286 ~~g~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~v-~~~~~~~~~~  331 (347)
                      -.|.+++.|+.||.++-+|..+|+++.+++-..+.. .-+.|..+++
T Consensus       482 TagglVF~G~~Dg~l~A~Da~TGe~LW~~~~~~~~~a~P~tY~~dGk  528 (596)
T d1w6sa_         482 TAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYPMTYTHKGT  528 (596)
T ss_dssp             ETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTE
T ss_pred             ecCCEEEEECCCCeEEEEECCCCcEeeEEECCCCcccCCeEEEECCE
Confidence            357788889999999999999999998775332211 2244555665


No 83 
>d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]}
Probab=96.47  E-value=0.13  Score=40.20  Aligned_cols=201  Identities=9%  Similarity=0.010  Sum_probs=119.3

Q ss_pred             ecCccccEEEEEECCCCCeEEEe-eCCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEE-EecCCCeEEEEECC
Q 019006           53 LTGHQSAVYTMKFNPAGTVIASG-SHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQII-SASPDKTLRAWDVE  130 (347)
Q Consensus        53 ~~~h~~~V~~v~~~~~~~~l~s~-~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-s~~~dg~i~iwd~~  130 (347)
                      +..+...+.+|+|.+..+.|.-. ..++.|+..++.+.... ..+......+.++++..-++.|+ +-...+.|.+.+++
T Consensus        31 ~~~~~~~~~~ld~D~~~~~iywsd~~~~~I~~~~l~g~~~~-~v~~~~~~~p~~iAvD~~~~~lY~~d~~~~~I~~~~~d  109 (263)
T d1npea_          31 LHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPT-TIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMD  109 (263)
T ss_dssp             EEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCE-EEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred             cccCCCcEEEEEEEeCCCEEEEEECCCCeEEEEEcccCCcE-EEEEeccccccEEEEeccCCeEEEeccCCCEEEEEecC
Confidence            44555678899999877766655 45677888777654332 22333335678888876566665 44566789999987


Q ss_pred             CCceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEE--eCCCCCceeec-CCCCceEEEEEcCCCCeEEEE-ecCC
Q 019006          131 TGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLW--DMRQRGAIQTF-PDKYQITAVSFSDASDKIYTG-GIDN  206 (347)
Q Consensus       131 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iw--d~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~-~~dg  206 (347)
                      .......+.........++..+....++.+-...+..+++  ++......... ..-.....+++++..+.|+.. ...+
T Consensus       110 g~~~~~l~~~~l~~p~~l~vdp~~g~ly~t~~~~~~~~I~r~~~dG~~~~~i~~~~~~~P~glaiD~~~~~lYw~d~~~~  189 (263)
T d1npea_         110 GTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTH  189 (263)
T ss_dssp             SCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTT
T ss_pred             CceEEEEecccccCCcEEEEecccCcEEEeecCCCCcEEEEecCCCCCceeeeeecccccceEEEeecCcEEEEEeCCCC
Confidence            5543222222223455666666666666654433343444  44433322222 223456889999888877655 4667


Q ss_pred             cEEEEeCCCCceEEEecCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCC
Q 019006          207 DVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMR  256 (347)
Q Consensus       207 ~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~  256 (347)
                      .|...|+........+.+-.. ..+|++. .+....+-...+.|...|..
T Consensus       190 ~I~~~~~~g~~~~~v~~~~~~-P~~lav~-~~~lYwtd~~~~~I~~~~~~  237 (263)
T d1npea_         190 RAECLNPAQPGRRKVLEGLQY-PFAVTSY-GKNLYYTDWKTNSVIAMDLA  237 (263)
T ss_dssp             EEEEEETTEEEEEEEEECCCS-EEEEEEE-TTEEEEEETTTTEEEEEETT
T ss_pred             EEEEEECCCCCeEEEECCCCC-cEEEEEE-CCEEEEEECCCCEEEEEECC
Confidence            899999875544433443332 4577775 33333444456777777765


No 84 
>d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]}
Probab=96.45  E-value=0.25  Score=43.25  Aligned_cols=234  Identities=15%  Similarity=0.155  Sum_probs=126.6

Q ss_pred             CCEEEEecCCCeEEEEECCCCceeeeeeccCccee-EeecCC-CCCCEEEEEcC------CCceEEEeCCCCCceeecCC
Q 019006          112 GSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVN-SCCPSR-RGPPLVVSGSD------DGTAKLWDMRQRGAIQTFPD  183 (347)
Q Consensus       112 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~-~~~~~~-~~~~~~~s~~~------d~~i~iwd~~~~~~~~~~~~  183 (347)
                      +..++.+..|+.+.-.|..+++.+........... .....+ -....++.+..      .|.|.-+|.++++.+-.+..
T Consensus       117 ~~~v~~~~~~g~l~Alda~tG~~~w~~~~~~~~~~~~~~~~p~v~~~~vivg~~~~~~~~~G~v~a~D~~TG~~~W~~~t  196 (560)
T d1kv9a2         117 GDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYT  196 (560)
T ss_dssp             BTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred             CCeEEEEeCCCEEEEEECCCCcEEeccCccCcccceeeeeeeeeecCcccccccceeccccceEEEEECCCceEEeeeee
Confidence            45788888999999999999998876653221110 000000 00123333332      35688899998887655421


Q ss_pred             ---C-----------------------------CceEEEEEcCCCCeEEEEec-------------------CCcEEEEe
Q 019006          184 ---K-----------------------------YQITAVSFSDASDKIYTGGI-------------------DNDVKVWD  212 (347)
Q Consensus       184 ---~-----------------------------~~v~~~~~~~~~~~l~~~~~-------------------dg~i~iwd  212 (347)
                         .                             ..-....+++..+.++.+..                   ...|.-.|
T Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~s~D~~~~l~y~~tgn~~~~~~~~~~~~~g~n~~s~sivAld  276 (560)
T d1kv9a2         197 VPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIR  276 (560)
T ss_dssp             SCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEEC
T ss_pred             ccccccCCccccccccccccccccccccccCCCCcccccccccccCeeeecCCCCcccccccccccCCccccceeeEEec
Confidence               0                             00122556666666654321                   23466778


Q ss_pred             CCCCceEEEecCCCCceeE---------EEECCCC---CEEEEEcCCCcEEEEeCCCCCCcCce-------eEEE-----
Q 019006          213 LRKGEVSMTLQGHQDMITG---------MSLSPDG---SYLLTNGMDCKLCIWDMRPYAPQNRC-------VKIL-----  268 (347)
Q Consensus       213 ~~~~~~~~~~~~~~~~i~~---------v~~~~~~---~~l~t~~~d~~i~~wd~~~~~~~~~~-------~~~~-----  268 (347)
                      +++++....++.....+..         +.+..++   ..++.++.+|.+.++|..+.+.....       ....     
T Consensus       277 ~~tG~~~W~~Q~~~~D~wd~d~~~~~~l~~~~~~g~~~~~v~~~~k~G~~~~lDr~tG~~i~~~~~~~~~~~~~~d~~~~  356 (560)
T d1kv9a2         277 PDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATG  356 (560)
T ss_dssp             TTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTC
T ss_pred             CCccceeEEEeccccccccccccceeeeeeeecCCceeeeeeecCccceEEEEecCCCcccccccccccccccccChhhc
Confidence            8999887766543322221         1122233   25667888899999997654321100       0000     


Q ss_pred             ---eccccccc-c------------ceEEEEECCCCCEEEEeeC------------------------------------
Q 019006          269 ---EGHQHNFE-K------------NLLKCGWSPDGSKVTAGSS------------------------------------  296 (347)
Q Consensus       269 ---~~~~~~~~-~------------~~~~~~~s~~g~~l~sgs~------------------------------------  296 (347)
                         ........ .            .-...+++|+..+++.-..                                    
T Consensus       357 ~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yvp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~  436 (560)
T d1kv9a2         357 RPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVV  436 (560)
T ss_dssp             CEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGC
T ss_pred             cccccccccccccceeeeeccccccccccccccCCCCeeecccccccceeeccccccccccccccccCcccccCCCCccc
Confidence               00000000 0            0113456677666654332                                    


Q ss_pred             CCeEEEEeCCCceeeEEecCCccCeeeEEEcCCCCEEEEecCCCcEEeec
Q 019006          297 DRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGE  346 (347)
Q Consensus       297 dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~i~~  346 (347)
                      .|.|.-||+.+++.+.+++-. .....-...-.+.++..++.||.++-+|
T Consensus       437 ~G~l~A~D~~tGk~~W~~~~~-~~~~gg~l~TagglVF~G~~dg~l~A~D  485 (560)
T d1kv9a2         437 SGALLAWDPVKQKAAWKVPYP-THWNGGTLSTAGNLVFQGTAAGQMHAYS  485 (560)
T ss_dssp             EEEEEEEETTTTEEEEEEEES-SSCCCCEEEETTTEEEEECTTSEEEEEE
T ss_pred             ccceEEEeCCCCeEeeeccCC-CCCCCceeEECCCEEEEECCCCcEEEEE
Confidence            257888999999998876532 2222222334456777788899888766


No 85 
>d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=96.42  E-value=0.15  Score=40.28  Aligned_cols=171  Identities=11%  Similarity=0.174  Sum_probs=102.4

Q ss_pred             CcEEEEeccCCCeeeEEEeCccc----ceeEEEEcCCCCEEEEec-------CCCeEEEEECCCCceeeeeeccCcceeE
Q 019006           79 RDIFLWHVHGDCKNFMVLKGHKN----AILDLHWTTDGSQIISAS-------PDKTLRAWDVETGKQIKKMAEHNSFVNS  147 (347)
Q Consensus        79 ~~v~~w~~~~~~~~~~~~~~h~~----~v~~~~~~~~~~~l~s~~-------~dg~i~iwd~~~~~~~~~~~~~~~~v~~  147 (347)
                      ..|+-|+++++..+...+..|..    .|..-.-+++.+.++..|       -.|.+.+|..+... .+.+.+|......
T Consensus       122 taVYHW~~~g~s~P~k~fdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~i~G~mQLYS~er~~-sQ~ieGhaa~F~~  200 (327)
T d1utca2         122 NAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGHAASFAQ  200 (327)
T ss_dssp             SEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTE-EEEECCSEEEEEE
T ss_pred             CceEEEcccCCCCchhhhhhcccccCceEEEEEECCCCCEEEEEeEecCCCceeEEEEEEEeccCc-CccccceeeeeEE
Confidence            46899999776666667766653    577777788888766543       23678899877543 3445555433222


Q ss_pred             eecCCC--CCCEEEEE---cCCCceEEEeCCCCCc-eee---------cCC---CCceEEEEEcCCCCeEEEEecCCcEE
Q 019006          148 CCPSRR--GPPLVVSG---SDDGTAKLWDMRQRGA-IQT---------FPD---KYQITAVSFSDASDKIYTGGIDNDVK  209 (347)
Q Consensus       148 ~~~~~~--~~~~~~s~---~~d~~i~iwd~~~~~~-~~~---------~~~---~~~v~~~~~~~~~~~l~~~~~dg~i~  209 (347)
                      +.....  ...+++.+   ...+++.+.++..... -..         ++.   ..-..++..++..+.++.-+.-|.|+
T Consensus       201 ~~~~g~~~~~~lf~fa~r~~~~~kLhIiEig~~~~g~~~f~kk~vdi~fppea~~DFPvamqvs~kygiiyviTK~G~i~  280 (327)
T d1utca2         201 FKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIH  280 (327)
T ss_dssp             ECCTTCSSCEEEEEEEEEETTEEEEEEEECSCCCTTCCCCCCEEEECCCCTTCTTCCEEEEEEETTTTEEEEEETTSEEE
T ss_pred             EEcCCCCCCceEEEEEECCCCCcEEEEEEcCCCccCCCCCcceeEEEECCccccCCcEEEEEeeccCCEEEEEecCcEEE
Confidence            222111  11233332   3336788888754211 111         122   12345677788888999999999999


Q ss_pred             EEeCCCCceEEEecCCCCceeEEEECCCCCEEEEEcCCCcE
Q 019006          210 VWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKL  250 (347)
Q Consensus       210 iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i  250 (347)
                      +||+.++.++..-+--.+.|..-+-..+..-+++...+|.+
T Consensus       281 lyDleTgt~i~~nRIs~~~iF~~a~~~~~~Gi~~VNr~GqV  321 (327)
T d1utca2         281 LYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQV  321 (327)
T ss_dssp             EEETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEETTSEE
T ss_pred             EEEcccccEEEEeecCCCceEEeccCCCCceEEEECCCCeE
Confidence            99999999887665545555544444443444444555544


No 86 
>d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]}
Probab=96.01  E-value=0.44  Score=41.78  Aligned_cols=147  Identities=14%  Similarity=0.108  Sum_probs=79.7

Q ss_pred             CEEEEecCCCeEEEEECCCCceeeeeeccCcce--eEeecCC-CCCCEEEEEcC------CCceEEEeCCCCCceeecCC
Q 019006          113 SQIISASPDKTLRAWDVETGKQIKKMAEHNSFV--NSCCPSR-RGPPLVVSGSD------DGTAKLWDMRQRGAIQTFPD  183 (347)
Q Consensus       113 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v--~~~~~~~-~~~~~~~s~~~------d~~i~iwd~~~~~~~~~~~~  183 (347)
                      ..++.+..|+.+.-.|..+|+.+..........  ......+ -....++.++.      .|.|..+|.++++.+..+..
T Consensus       129 ~~v~~~t~~g~l~alda~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~vivg~~~~~~~~~G~v~a~D~~TG~~~W~~~t  208 (573)
T d1kb0a2         129 GKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFS  208 (573)
T ss_dssp             TEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred             CcEEEEecccceeeeccccccceecccCccCCcceEEeecceEEEeccEEEeeccccccccceEEEEecCCccceeeeee
Confidence            467778889999888999998876554321110  0000000 00123444432      46799999999887654311


Q ss_pred             ---C-----------------------------Cce-EEEEEcCCCCeEEEEec-------------------CCcEEEE
Q 019006          184 ---K-----------------------------YQI-TAVSFSDASDKIYTGGI-------------------DNDVKVW  211 (347)
Q Consensus       184 ---~-----------------------------~~v-~~~~~~~~~~~l~~~~~-------------------dg~i~iw  211 (347)
                         .                             ..+ ...++++....++.+..                   ...|.-.
T Consensus       209 ~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~G~~vW~~~s~D~~~g~~~~~~g~~~~~~~~~~~~~~g~~~~~~svvAl  288 (573)
T d1kb0a2         209 VPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVAL  288 (573)
T ss_dssp             SCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEE
T ss_pred             ccccCCCCCCcccccccccccCCCCceeecCCCCcccccceEchhhCeeeeccCCCccccccccccccccccccceEEEe
Confidence               0                             001 23456666666554321                   1236667


Q ss_pred             eCCCCceEEEecCCCCceeE---------EEECCCC---CEEEEEcCCCcEEEEeCCCCC
Q 019006          212 DLRKGEVSMTLQGHQDMITG---------MSLSPDG---SYLLTNGMDCKLCIWDMRPYA  259 (347)
Q Consensus       212 d~~~~~~~~~~~~~~~~i~~---------v~~~~~~---~~l~t~~~d~~i~~wd~~~~~  259 (347)
                      |.++++....++.....+..         .....++   ..++.++.+|.+..+|..+.+
T Consensus       289 d~~tG~~~W~~q~~~~d~wd~d~~~~~~l~~~~~~g~~~~~v~~~~k~G~l~~lDr~tGe  348 (573)
T d1kb0a2         289 DPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGK  348 (573)
T ss_dssp             CTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCC
T ss_pred             cccchheeecccccCcccccccccceeeecceecCCCceeeeeeccccceeEEecccccc
Confidence            77888776655432221211         1111222   356777888999999976543


No 87 
>d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]}
Probab=95.71  E-value=0.58  Score=40.82  Aligned_cols=49  Identities=14%  Similarity=0.297  Sum_probs=34.4

Q ss_pred             CCCCEEEEeeCCCeEEEEeCCCceeeEEecCCccCe-eeEEEcCCCC-EEE
Q 019006          286 PDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSV-NESVFHATEP-VIG  334 (347)
Q Consensus       286 ~~g~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~v-~~~~~~~~~~-~l~  334 (347)
                      -.|.+++.|+.||.++-+|..+|+++.+++-..+.. .-+.|..+++ +|+
T Consensus       467 TagglVF~G~~dg~l~A~Da~tGe~LW~~~l~~~~~~~P~ty~~dGkqyv~  517 (560)
T d1kv9a2         467 TAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTFELAGRQYVA  517 (560)
T ss_dssp             ETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred             ECCCEEEEECCCCcEEEEECCCCcEeEEEECCCCccccCEEEEECCEEEEE
Confidence            356788899999999999999999998776432211 2245555665 444


No 88 
>d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=94.52  E-value=0.92  Score=36.63  Aligned_cols=31  Identities=26%  Similarity=0.641  Sum_probs=24.5

Q ss_pred             CceeEEEECCCCCEEEEE-cCCCcEEEEeCCC
Q 019006          227 DMITGMSLSPDGSYLLTN-GMDCKLCIWDMRP  257 (347)
Q Consensus       227 ~~i~~v~~~~~~~~l~t~-~~d~~i~~wd~~~  257 (347)
                      ...+.|+++|++++|+.+ ...+.|+.|++..
T Consensus       206 ~~pNGI~~s~d~~~lyVa~t~~~~i~~y~~~~  237 (340)
T d1v04a_         206 DFANGINISPDGKYVYIAELLAHKIHVYEKHA  237 (340)
T ss_dssp             SSEEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred             CccceeEECCCCCEEEEEeCCCCeEEEEEeCC
Confidence            457899999999877655 5567899999864


No 89 
>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]}
Probab=94.35  E-value=1  Score=36.54  Aligned_cols=95  Identities=22%  Similarity=0.295  Sum_probs=58.9

Q ss_pred             EEEEeCCCCceEE---EecCCCCceeEEEECCCCCEEEEEcCC-CcEEEEeCCCCCCcCceeEEEeccccccccceEEEE
Q 019006          208 VKVWDLRKGEVSM---TLQGHQDMITGMSLSPDGSYLLTNGMD-CKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCG  283 (347)
Q Consensus       208 i~iwd~~~~~~~~---~~~~~~~~i~~v~~~~~~~~l~t~~~d-~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (347)
                      +.+||..+++-..   ....+.......++.++++.++.|+.+ ..+.+||....    .. ......  .....-..++
T Consensus        54 ~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~i~v~Gg~~~~~~~~yd~~~~----~w-~~~~~~--~~~r~~~~~~  126 (387)
T d1k3ia3          54 TSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSD----SW-IPGPDM--QVARGYQSSA  126 (387)
T ss_dssp             EEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGGT----EE-EECCCC--SSCCSSCEEE
T ss_pred             EEEEECCCCcEeecCCCCCCcccceeEEEEecCCcEEEeecCCCcceeEecCccC----cc-cccccc--ccccccccee
Confidence            6789988764221   112233333456788999999988765 58999997632    11 111111  1122234556


Q ss_pred             ECCCCCEEEEeeCC------CeEEEEeCCCce
Q 019006          284 WSPDGSKVTAGSSD------RMVYIWDTTSRR  309 (347)
Q Consensus       284 ~s~~g~~l~sgs~d------g~i~vwd~~~~~  309 (347)
                      ..+||+.++.|+.+      ..+.+||..+.+
T Consensus       127 ~~~dG~v~v~GG~~~~~~~~~~v~~yd~~~~~  158 (387)
T d1k3ia3         127 TMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKT  158 (387)
T ss_dssp             ECTTSCEEEECCCCCSSSCCCCEEEEETTTTE
T ss_pred             eecCCceeeeccccccccccceeeeecCCCCc
Confidence            67899999998753      368999988765


No 90 
>d1h6la_ b.68.3.1 (A:) Thermostable phytase (3-phytase) {Bacillus amyloliquefaciens [TaxId: 1390]}
Probab=94.24  E-value=1.1  Score=36.32  Aligned_cols=198  Identities=13%  Similarity=0.256  Sum_probs=105.8

Q ss_pred             CCCCEEEEecCCCeEEEEECCCCceeeeeeccCcceeE--e----ecCCCCCCEEEEEcC-C--CceEEEeCCC-CCcee
Q 019006          110 TDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNS--C----CPSRRGPPLVVSGSD-D--GTAKLWDMRQ-RGAIQ  179 (347)
Q Consensus       110 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~--~----~~~~~~~~~~~s~~~-d--~~i~iwd~~~-~~~~~  179 (347)
                      |+..+++....++-+.+||++ |+.+..+...  .++.  +    ........++++... +  .+|.+|.+.. ...+.
T Consensus        38 p~~SlI~gTdK~~Gl~vYdL~-G~~l~~~~~G--r~NNVDvr~~~~l~~~~~di~vasnR~~~~~~l~~~~id~~~~~l~  114 (353)
T d1h6la_          38 PQNSKLITTNKKSGLAVYSLE-GKMLHSYHTG--KLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQ  114 (353)
T ss_dssp             GGGCEEEEEETTSCCEEEETT-CCEEEECCSS--CEEEEEEEEEEEETTEEEEEEEEEECCTTTCEEEEEEEETTTTEEE
T ss_pred             cCccEEEEEcCcCCEEEEcCC-CcEEEecccC--CcCccccccccccCCcceEEEEEeCCcCcceeEEEEEecCcccccc
Confidence            345567766777679999985 7766655321  1111  1    111111123333322 2  3577777642 22232


Q ss_pred             ecC--------CCCceEEEEE--cCCCC--eEEEEecCCcEEEEeCC---CCc----eEEEecCCCCceeEEEECCCCCE
Q 019006          180 TFP--------DKYQITAVSF--SDASD--KIYTGGIDNDVKVWDLR---KGE----VSMTLQGHQDMITGMSLSPDGSY  240 (347)
Q Consensus       180 ~~~--------~~~~v~~~~~--~~~~~--~l~~~~~dg~i~iwd~~---~~~----~~~~~~~~~~~i~~v~~~~~~~~  240 (347)
                      .+.        ....+..+|+  ++..+  ++++...+|.+..|.+.   .+.    .+.++.. ...+.++.+....+.
T Consensus       115 ~~~~~~~p~~~~~~~vYGlc~y~~~~~g~~~afv~~k~G~v~q~~l~~~~~g~v~~~lvr~f~~-~~q~EGCVvDde~~~  193 (353)
T d1h6la_         115 SITDPNRPIASAIDEVYGFSLYHSQKTGKYYAMVTGKEGEFEQYELNADKNGYISGKKVRAFKM-NSQTEGMAADDEYGS  193 (353)
T ss_dssp             ECSCSSSCEECSSSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSSEEEEEEEEEEC-SSCEEEEEEETTTTE
T ss_pred             cccccccccccccCcceEEEEEecCCCCeEEEEEEcCCceEEEEEEEcCCCCceeeEeeeccCC-CCccceEEEeCCCCc
Confidence            222        1224666666  55544  45667788999888663   232    2333332 346889999999999


Q ss_pred             EEEEcCCCcEEEEeCCCCCCcCce-eEEEeccccccccceEEEE--ECCCCC-EEE-EeeCCCeEEEEeCCCc-eeeEE
Q 019006          241 LLTNGMDCKLCIWDMRPYAPQNRC-VKILEGHQHNFEKNLLKCG--WSPDGS-KVT-AGSSDRMVYIWDTTSR-RILYK  313 (347)
Q Consensus       241 l~t~~~d~~i~~wd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--~s~~g~-~l~-sgs~dg~i~vwd~~~~-~~~~~  313 (347)
                      |+.+-.+..+..++..+....... +....+  ..+...+-.++  -..++. +|+ |.-.+++..+||.... +.+..
T Consensus       194 LyisEE~~Giw~~~a~~~~~~~~~~i~~~~g--~~l~~D~EGlaiy~~~~~~GylivSsQG~n~f~vydr~~~~~~~g~  270 (353)
T d1h6la_         194 LYIAEEDEAIWKFSAEPDGGSNGTVIDRADG--RHLTPDIEGLTIYYAADGKGYLLASSQGNSSYAIYERQGQNKYVAD  270 (353)
T ss_dssp             EEEEETTTEEEEEESSTTSCSCCEEEEECSS--SSCCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEE
T ss_pred             EEEecCccceEEEEeccCCCccceeeecccC--ccccCCccccEEEEcCCCCeEEEEEcCCCCeEEEEecCCCccccce
Confidence            999988877766666543222222 111111  11233333333  344433 554 4446788999998763 55543


No 91 
>d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.84  E-value=1.1  Score=34.76  Aligned_cols=212  Identities=8%  Similarity=-0.046  Sum_probs=118.3

Q ss_pred             eEEEEECCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCC----ceeec-CCCCceEEEEEcCCCC
Q 019006          123 TLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRG----AIQTF-PDKYQITAVSFSDASD  197 (347)
Q Consensus       123 ~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~----~~~~~-~~~~~v~~~~~~~~~~  197 (347)
                      .|+..++++.... .+......+..+.+......++.+=...+.|.-.++....    ..... .....+..+++++.++
T Consensus        11 ~I~~~~l~~~~~~-~~~~~~~~~~~id~d~~~~~lYw~D~~~~~I~~~~l~~~~~~~~~~~~~~~~~~~p~glAvD~~~~   89 (266)
T d1ijqa1          11 EVRKMTLDRSEYT-SLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHS   89 (266)
T ss_dssp             SEEEEETTSCCCE-EEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTT
T ss_pred             eEEEEECCCCcce-eeeCCCCceEEEEEEeCCCEEEEEECCCCEEEEEEecCCCCCcceEEEEeCCCCCcceEEEeeccc
Confidence            3666676654322 2222223344455555555555555556666655554211    11111 2234567788987777


Q ss_pred             eEEEEe-cCCcEEEEeCCCCceEEEecCCCCceeEEEECCCCCEEEEEc--CCCcEEEEeCCCCCCcCceeEEEeccccc
Q 019006          198 KIYTGG-IDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNG--MDCKLCIWDMRPYAPQNRCVKILEGHQHN  274 (347)
Q Consensus       198 ~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~--~d~~i~~wd~~~~~~~~~~~~~~~~~~~~  274 (347)
                      .++... ..+.|.+.++........+.........++++|...+|.-..  ..+.|...++..     .....+-...  
T Consensus        90 ~lY~~d~~~~~I~v~~~~g~~~~~~~~~~~~~P~~l~vd~~~g~ly~~~~~~~~~I~r~~~dG-----s~~~~l~~~~--  162 (266)
T d1ijqa1          90 NIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG-----VDIYSLVTEN--  162 (266)
T ss_dssp             EEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS-----CCEEEEECSS--
T ss_pred             eEEEEecCCCEEEeEecCCceEEEEEcCCCCCcceEEEEcccCeEEEeccCCCcceeEeccCC-----Cceecccccc--
Confidence            776654 557899999886665555555556678999998766666543  334566666542     1112221111  


Q ss_pred             cccceEEEEECCCCCEEEEe-eCCCeEEEEeCCCceeeEEe--cCCccCeeeEEEcCCCCEEEEecCCCcEEe
Q 019006          275 FEKNLLKCGWSPDGSKVTAG-SSDRMVYIWDTTSRRILYKL--PGHTGSVNESVFHATEPVIGSCSSDKQIYL  344 (347)
Q Consensus       275 ~~~~~~~~~~s~~g~~l~sg-s~dg~i~vwd~~~~~~~~~~--~~h~~~v~~~~~~~~~~~l~s~s~D~~i~i  344 (347)
                       -.....+++.+.+..|... +..+.|...++........+  .........+++. ++.+..+-..++.|+-
T Consensus       163 -~~~p~gl~iD~~~~~lYw~d~~~~~I~~~~~dG~~~~~~~~~~~~~~~p~~lav~-~~~ly~td~~~~~I~~  233 (266)
T d1ijqa1         163 -IQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFS  233 (266)
T ss_dssp             -CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEE
T ss_pred             -cceeeEEEeeccccEEEEecCCcCEEEEEECCCCCEEEEEeCCCcccccEEEEEE-CCEEEEEECCCCeEEE
Confidence             1345678888888777665 55688999998665433222  2222345677776 3455555555666644


No 92 
>d1h6la_ b.68.3.1 (A:) Thermostable phytase (3-phytase) {Bacillus amyloliquefaciens [TaxId: 1390]}
Probab=93.10  E-value=1.8  Score=35.04  Aligned_cols=184  Identities=9%  Similarity=0.206  Sum_probs=107.1

Q ss_pred             CEEEEEcCCCceEEEeCCCCCceeecCCCCceEEEEEc------CCCCeEEEEecC----CcEEEEeCCC-CceEEEecC
Q 019006          156 PLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFS------DASDKIYTGGID----NDVKVWDLRK-GEVSMTLQG  224 (347)
Q Consensus       156 ~~~~s~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~------~~~~~l~~~~~d----g~i~iwd~~~-~~~~~~~~~  224 (347)
                      .+++.....+-+.+||+. ++.++.++. .+++.+..-      .....+++++..    ..|.+|.+.. ......+..
T Consensus        41 SlI~gTdK~~Gl~vYdL~-G~~l~~~~~-Gr~NNVDvr~~~~l~~~~~di~vasnR~~~~~~l~~~~id~~~~~l~~~~~  118 (353)
T d1h6la_          41 SKLITTNKKSGLAVYSLE-GKMLHSYHT-GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSITD  118 (353)
T ss_dssp             CEEEEEETTSCCEEEETT-CCEEEECCS-SCEEEEEEEEEEEETTEEEEEEEEEECCTTTCEEEEEEEETTTTEEEECSC
T ss_pred             cEEEEEcCcCCEEEEcCC-CcEEEeccc-CCcCccccccccccCCcceEEEEEeCCcCcceeEEEEEecCcccccccccc
Confidence            466666666679999985 666666542 345544432      222235555532    2577776642 222222221


Q ss_pred             C-------CCceeEEEE--CCC-CC-EEEEEcCCCcEEEEeCCCCCCc---CceeEEEeccccccccceEEEEECCCCCE
Q 019006          225 H-------QDMITGMSL--SPD-GS-YLLTNGMDCKLCIWDMRPYAPQ---NRCVKILEGHQHNFEKNLLKCGWSPDGSK  290 (347)
Q Consensus       225 ~-------~~~i~~v~~--~~~-~~-~l~t~~~d~~i~~wd~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~s~~g~~  290 (347)
                      .       ...+..+|+  ++. +. ++++...+|.+..|.+......   ...++.+.     ....+-.|.+......
T Consensus       119 ~~~p~~~~~~~vYGlc~y~~~~~g~~~afv~~k~G~v~q~~l~~~~~g~v~~~lvr~f~-----~~~q~EGCVvDde~~~  193 (353)
T d1h6la_         119 PNRPIASAIDEVYGFSLYHSQKTGKYYAMVTGKEGEFEQYELNADKNGYISGKKVRAFK-----MNSQTEGMAADDEYGS  193 (353)
T ss_dssp             SSSCEECSSSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSSEEEEEEEEEE-----CSSCEEEEEEETTTTE
T ss_pred             cccccccccCcceEEEEEecCCCCeEEEEEEcCCceEEEEEEEcCCCCceeeEeeeccC-----CCCccceEEEeCCCCc
Confidence            1       123677777  664 43 5677788899998877532211   12222222     2345778889999999


Q ss_pred             EEEeeCCCeEEEEeCCC-----ceeeEEecC--CccCeeeEEEcCC----CCEEEEecCCCcEEeec
Q 019006          291 VTAGSSDRMVYIWDTTS-----RRILYKLPG--HTGSVNESVFHAT----EPVIGSCSSDKQIYLGE  346 (347)
Q Consensus       291 l~sgs~dg~i~vwd~~~-----~~~~~~~~~--h~~~v~~~~~~~~----~~~l~s~s~D~~i~i~~  346 (347)
                      |..+-.+.-|+.+++..     +.++....+  ..+.+-.++.-..    +-+|+|.-.|.+..++|
T Consensus       194 LyisEE~~Giw~~~a~~~~~~~~~~i~~~~g~~l~~D~EGlaiy~~~~~~GylivSsQG~n~f~vyd  260 (353)
T d1h6la_         194 LYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTPDIEGLTIYYAADGKGYLLASSQGNSSYAIYE  260 (353)
T ss_dssp             EEEEETTTEEEEEESSTTSCSCCEEEEECSSSSCCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEE
T ss_pred             EEEecCccceEEEEeccCCCccceeeecccCccccCCccccEEEEcCCCCeEEEEEcCCCCeEEEEe
Confidence            99999888787776642     233333322  3556777775433    34666766788887775


No 93 
>d1xipa_ b.69.14.1 (A:) Nucleoporin NUP159 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=92.81  E-value=2.1  Score=35.04  Aligned_cols=141  Identities=11%  Similarity=0.070  Sum_probs=77.7

Q ss_pred             ceEEEEEcCCCCeEEEEecCCcEEEEeCCCCceEEEecCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCcee
Q 019006          186 QITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCV  265 (347)
Q Consensus       186 ~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~  265 (347)
                      .+..++|+.+  .++.. .++.+..++...-........-...+.++.+.|.  .++....++.+-++++......    
T Consensus        88 ~v~~vafs~d--~l~v~-~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~p~--~~~l~~~~~~~~~~~l~~~~~~----  158 (381)
T d1xipa_          88 DVIFVCFHGD--QVLVS-TRNALYSLDLEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTK----  158 (381)
T ss_dssp             TEEEEEEETT--EEEEE-ESSEEEEEESSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEE----
T ss_pred             CeEEEEeeCC--EEEEE-eCCCEEEEEeeccccccccccccccccceecCCc--eeEEEecCCCEEEEEeccCccc----
Confidence            5788888754  44443 4456777877654333333223456788888774  4566667888999998754211    


Q ss_pred             EEEec-cccccccceEEEEECCCCCEEEEeeCCCeEEEE-eCCCceeeEEecCCccCeeeEEEcCCCCEEEEe
Q 019006          266 KILEG-HQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIW-DTTSRRILYKLPGHTGSVNESVFHATEPVIGSC  336 (347)
Q Consensus       266 ~~~~~-~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vw-d~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~  336 (347)
                      ....+ ..........+++|++.|..++++..++ ..+- +......+..-......|.++.|-.+..+++.-
T Consensus       159 ~~~~~v~~~~~~~~~~~v~ws~kgkq~v~~~g~~-~q~k~~i~~~~~~~~p~~~~~~v~sI~WL~~~~F~vvy  230 (381)
T d1xipa_         159 QLAQNVTSFDVTNSQLAVLLKDRSFQSFAWRNGE-MEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVF  230 (381)
T ss_dssp             EEEESEEEEEECSSEEEEEETTSCEEEEEEETTE-EEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEE
T ss_pred             cccCCcceEEecCCceEEEEeCCcEEEEEeCCCc-eeeccCCCCccccCCCcCCCcceeEEEEecCceEEEEE
Confidence            11110 1112234567778888888887774432 2211 111111111111234467888888777776643


No 94 
>d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=92.69  E-value=2  Score=34.56  Aligned_cols=136  Identities=12%  Similarity=0.089  Sum_probs=73.7

Q ss_pred             CCcEEEEeCCCCceEE---EecCCC-----CceeEEEE--CCCCC-EEEEEc---CCCcEEEEeCCCCCCcCceeEEEec
Q 019006          205 DNDVKVWDLRKGEVSM---TLQGHQ-----DMITGMSL--SPDGS-YLLTNG---MDCKLCIWDMRPYAPQNRCVKILEG  270 (347)
Q Consensus       205 dg~i~iwd~~~~~~~~---~~~~~~-----~~i~~v~~--~~~~~-~l~t~~---~d~~i~~wd~~~~~~~~~~~~~~~~  270 (347)
                      .|.|.++|+.+.+...   .+.+..     -....+.+  .+++. +|++..   ...+|-+|++.........+.++..
T Consensus        67 ~G~i~~~dl~~~~~~~~~l~~~~~~~~~~~f~PhGi~l~~~~dg~~~L~vvnH~~~~~~ieif~~~~~~~~l~~~~~v~~  146 (340)
T d1v04a_          67 SGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRH  146 (340)
T ss_dssp             CCEEEEEETTSSSCCEEECEEECSSSCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECC
T ss_pred             CCeEEEEecCCCCCcceEEEecCCCCCCcceeccceeEEEcCCCcEEEEEEeccCCCceeEEEEEeCCCCeEEEEeecCC
Confidence            4889999987653221   222110     11234443  34555 344442   3457888887643322222223322


Q ss_pred             cccccccceEEEEECCCCCEEEEee-----------------CCCeEEEEeCCCceeeEEecCCccCeeeEEEcCCCCEE
Q 019006          271 HQHNFEKNLLKCGWSPDGSKVTAGS-----------------SDRMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVI  333 (347)
Q Consensus       271 ~~~~~~~~~~~~~~s~~g~~l~sgs-----------------~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l  333 (347)
                         ........++...+|.+.+|-.                 .-+.+..||....+.+   ...-...+.++++|+++.|
T Consensus       147 ---~~~~~pNDv~~~~~g~fy~Tnd~~~~~~~~~~~e~~~~~~~g~v~~~~~~~~~~~---~~~l~~pNGI~~s~d~~~l  220 (340)
T d1v04a_         147 ---KLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPNDVRVV---AEGFDFANGINISPDGKYV  220 (340)
T ss_dssp             ---TTCSSEEEEEEEETTEEEEEESCSCCSHHHHHHHHHTTCCCEEEEEECSSCEEEE---EEEESSEEEEEECTTSSEE
T ss_pred             ---ccccCccceEEecCCCEEEecCccCcChhhhhhhHhhcCCceeEEEEcCCceEEE---cCCCCccceeEECCCCCEE
Confidence               2223467777888888888831                 1234455554433222   2223468999999998754


Q ss_pred             -EEecCCCcEEeec
Q 019006          334 -GSCSSDKQIYLGE  346 (347)
Q Consensus       334 -~s~s~D~~i~i~~  346 (347)
                       ++-+..+.|+.++
T Consensus       221 yVa~t~~~~i~~y~  234 (340)
T d1v04a_         221 YIAELLAHKIHVYE  234 (340)
T ss_dssp             EEEEGGGTEEEEEE
T ss_pred             EEEeCCCCeEEEEE
Confidence             4555677777765


No 95 
>d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]}
Probab=92.51  E-value=3  Score=36.19  Aligned_cols=45  Identities=22%  Similarity=0.375  Sum_probs=32.8

Q ss_pred             CCCEEEEeeCCCeEEEEeCCCceeeEEecCCccCe-eeEEEcCCCC
Q 019006          287 DGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSV-NESVFHATEP  331 (347)
Q Consensus       287 ~g~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~v-~~~~~~~~~~  331 (347)
                      .|.+|++|+.||.++.||..+|+.+.+++-..+.. .-+.|..+++
T Consensus       487 agglVF~G~~dg~l~A~Da~TGe~LW~~~~~~~~~~~P~ty~~~Gk  532 (573)
T d1kb0a2         487 AGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGR  532 (573)
T ss_dssp             TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTE
T ss_pred             cCCEEEEECCCCeEEEEECCCCcEeEEEECCCCccccCEEEEECCE
Confidence            67788899999999999999999998765332211 1244555665


No 96 
>d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=91.87  E-value=3.6  Score=35.72  Aligned_cols=48  Identities=10%  Similarity=0.123  Sum_probs=34.6

Q ss_pred             CeEEEEeCCCceeeEEecCCccCeeeEEEcCCCCEEEEecCCCcEEeec
Q 019006          298 RMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQIYLGE  346 (347)
Q Consensus       298 g~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~i~~  346 (347)
                      |.|.-+|+.+++++.+.+.+. ++..-..+..+.++..++.||.++-+|
T Consensus       466 G~l~AiD~~TG~i~W~~~~~~-p~~~g~lstagglVF~Gt~dg~l~A~D  513 (582)
T d1flga_         466 GSLRAMDPVSGKVVWEHKEHL-PLWAGVLATAGNLVFTGTGDGYFKAFD  513 (582)
T ss_dssp             EEEEEECTTTCCEEEEEEESS-CCCSCCEEETTTEEEEECTTSEEEEEE
T ss_pred             CeEEEEcCCCCcEEeecCCCC-CCccceeEEcCCeEEEeCCCCeEEEEE
Confidence            678889999999998876443 233223445566777889999998776


No 97 
>d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=90.51  E-value=4.9  Score=34.81  Aligned_cols=47  Identities=21%  Similarity=0.335  Sum_probs=35.1

Q ss_pred             CCCCCEEEEeeCCCeEEEEeCCCceeeEEecCCccCe-eeEEEcCCCC
Q 019006          285 SPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSV-NESVFHATEP  331 (347)
Q Consensus       285 s~~g~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~v-~~~~~~~~~~  331 (347)
                      +..|.+++.|+.||.++-||.++|+++.+++-..... .-+.|..+++
T Consensus       494 stagglVF~Gt~dg~l~A~Da~TGe~LW~~~~~~~~~~~P~ty~~~G~  541 (582)
T d1flga_         494 ATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGE  541 (582)
T ss_dssp             EETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTE
T ss_pred             EEcCCeEEEeCCCCeEEEEECCCCcEeEEEECCCCccccCEEEEECCE
Confidence            3467788899999999999999999998776432221 2356777775


No 98 
>d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}
Probab=90.16  E-value=4.3  Score=33.56  Aligned_cols=244  Identities=16%  Similarity=0.159  Sum_probs=112.8

Q ss_pred             CccccEEEEEECCCCCeEEEe-eC----CCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEecCC--------
Q 019006           55 GHQSAVYTMKFNPAGTVIASG-SH----DRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPD--------  121 (347)
Q Consensus        55 ~h~~~V~~v~~~~~~~~l~s~-~~----d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d--------  121 (347)
                      ++.-.+....++|+++++|-+ +.    -..++++|+.+.......+..  .....+.|++|++.|+-...|        
T Consensus       122 ~~~~~~~~~~~Spd~~~la~s~d~~G~e~~~l~v~Dl~tg~~~~~~i~~--~~~~~~~W~~D~~~~~Y~~~~~~~~~~~~  199 (430)
T d1qfma1         122 DGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER--VKFSCMAWTHDGKGMFYNAYPQQDGKSDG  199 (430)
T ss_dssp             SSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE--ECSCCEEECTTSSEEEEEECCCCSSCCSS
T ss_pred             cccceecceEecCCCCEEEEEeccccCchheeEEeccCcceeccccccc--ccccceEEcCCCCEEEEEEeccccCcccc
Confidence            444445667889999988732 22    335889998654221112211  122568899999987654322        


Q ss_pred             --------CeEEEEECCCCcee--eeeec--cCcceeEeecCCCCCCEEEEEc--CCCceEEE--eCCCCCc--------
Q 019006          122 --------KTLRAWDVETGKQI--KKMAE--HNSFVNSCCPSRRGPPLVVSGS--DDGTAKLW--DMRQRGA--------  177 (347)
Q Consensus       122 --------g~i~iwd~~~~~~~--~~~~~--~~~~v~~~~~~~~~~~~~~s~~--~d~~i~iw--d~~~~~~--------  177 (347)
                              ..|..|.+.+....  ..+..  ..........+.++..+++...  .+....+|  |+.....        
T Consensus       200 ~~~~~~~~~~v~~h~lgt~~~~d~~v~~e~d~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~  279 (430)
T d1qfma1         200 TETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKW  279 (430)
T ss_dssp             SCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCC
T ss_pred             cccccCCcceEEEEECCCCccccccccccccCCceEEeeeccCCcceeeEEeeccCCccEEEEEeeCCCcccccccccce
Confidence                    25777777664321  11221  2223333444555544444332  23334444  4432111        


Q ss_pred             eeecCC-CCceEEEEEcCCCCeEEEEe----cCCcEEEEeCCCCce---EEEecCCCCceeEEEECCCCCEEEEEc-CCC
Q 019006          178 IQTFPD-KYQITAVSFSDASDKIYTGG----IDNDVKVWDLRKGEV---SMTLQGHQDMITGMSLSPDGSYLLTNG-MDC  248 (347)
Q Consensus       178 ~~~~~~-~~~v~~~~~~~~~~~l~~~~----~dg~i~iwd~~~~~~---~~~~~~~~~~i~~v~~~~~~~~l~t~~-~d~  248 (347)
                      ...... .....-+. + .+..++.-+    .++.|...++.....   ...+..+...+..-.+...+.+|+..- .++
T Consensus       280 ~~~~~~~~~~~~~~~-~-~~~~~~~~Tn~~a~~~~L~~~~~~~~~~~~w~~vi~~~~~~~~~~~~~~~~~~lvl~~~~~~  357 (430)
T d1qfma1         280 VKLIDNFEGEYDYVT-N-EGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDV  357 (430)
T ss_dssp             EEEECSSSSCEEEEE-E-ETTEEEEEECTTCTTCEEEEEETTBCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETT
T ss_pred             eEeecccccceEEEe-c-CCceeecccCcccccceeEEecCCCCccccceEEecccCcceeeeEEEEECCEEEEEEEcCC
Confidence            111111 11122222 2 233333322    235566666654321   122333443343333333455666543 443


Q ss_pred             --cEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEEEE--eeC--CCeEEEEeCCCcee
Q 019006          249 --KLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTA--GSS--DRMVYIWDTTSRRI  310 (347)
Q Consensus       249 --~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s--gs~--dg~i~vwd~~~~~~  310 (347)
                        .|+++++....    ........    ...+..+...++...+..  .|.  =..++.+|+.+++.
T Consensus       358 ~~~l~v~~~~~~~----~~~~~~~~----~~sv~~~~~~~~~~~~~~~~ss~~tP~~~y~~Dl~t~~~  417 (430)
T d1qfma1         358 KNTLQLHDLATGA----LLKIFPLE----VGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEEL  417 (430)
T ss_dssp             EEEEEEEETTTCC----EEEEECCC----SSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSSC
T ss_pred             EeEEEEEECCCCc----EEEecCCC----CceEeeccCCCCCCEEEEEEcCCCCCCeEEEEECCCCCc
Confidence              67888876422    11111111    123334444455544332  221  15788888887753


No 99 
>d1xipa_ b.69.14.1 (A:) Nucleoporin NUP159 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=89.96  E-value=4.2  Score=33.12  Aligned_cols=135  Identities=12%  Similarity=0.116  Sum_probs=74.3

Q ss_pred             EEEEEECCCCCeEEEeeCCCcEEEEecc---------CCCeeeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEECC
Q 019006           60 VYTMKFNPAGTVIASGSHDRDIFLWHVH---------GDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVE  130 (347)
Q Consensus        60 V~~v~~~~~~~~l~s~~~d~~v~~w~~~---------~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~  130 (347)
                      ..-++.++...++|.|+.++ +++-...         .....+ ..+..-..|..++|+.+  .|+.. .++.+..++..
T Consensus        39 ~~LLAVsn~~GLl~aa~~~~-l~V~~t~~l~~~~~~~~~~~~~-~~~~~ip~v~~vafs~d--~l~v~-~~~~l~~~~~~  113 (381)
T d1xipa_          39 LQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTF-KWEKEIPDVIFVCFHGD--QVLVS-TRNALYSLDLE  113 (381)
T ss_dssp             CBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCC-SEEEECTTEEEEEEETT--EEEEE-ESSEEEEEESS
T ss_pred             cceEEEeCCCCEEEEECCCE-EEEEEHHHHHHHhhccCCCCcc-eeccCCCCeEEEEeeCC--EEEEE-eCCCEEEEEee
Confidence            33556667777888888775 4455431         000111 01111235888999744  45444 45567777776


Q ss_pred             CCceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceeec------CCCCceEEEEEcCCCCeEEEE
Q 019006          131 TGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTF------PDKYQITAVSFSDASDKIYTG  202 (347)
Q Consensus       131 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~~------~~~~~v~~~~~~~~~~~l~~~  202 (347)
                      .-........-...+....+.+   ..++....++.+.++++...+.....      .-...+.+++|++.+..++++
T Consensus       114 ~l~~~~~~~~~~~~~~~~~~~p---~~~~l~~~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~v~ws~kgkq~v~~  188 (381)
T d1xipa_         114 ELSEFRTVTSFEKPVFQLKNVN---NTLVILNSVNDLSALDLRTKSTKQLAQNVTSFDVTNSQLAVLLKDRSFQSFAW  188 (381)
T ss_dssp             STTCEEEEEECSSCEEEEEECS---SEEEEEETTSEEEEEETTTCCEEEEEESEEEEEECSSEEEEEETTSCEEEEEE
T ss_pred             ccccccccccccccccceecCC---ceeEEEecCCCEEEEEeccCccccccCCcceEEecCCceEEEEeCCcEEEEEe
Confidence            5433333222233444555544   34566677888999998876533221      123456677777666666665


No 100
>d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}
Probab=87.04  E-value=7.4  Score=32.39  Aligned_cols=53  Identities=15%  Similarity=0.216  Sum_probs=36.7

Q ss_pred             CceEEEEEcCCCCeEEEEecCCcEEEEeCCCCceEE--Eec------CCCCceeEEEECCC
Q 019006          185 YQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSM--TLQ------GHQDMITGMSLSPD  237 (347)
Q Consensus       185 ~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~--~~~------~~~~~i~~v~~~~~  237 (347)
                      ....+++|.|+++.+++--..|+|++++..+++...  .+.      .-+.-...|+|+|+
T Consensus        27 ~~P~~la~~pdg~llVter~~G~i~~v~~~~g~~~~i~~~~~~~~~~~ge~GLLgia~~Pd   87 (450)
T d1crua_          27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPD   87 (450)
T ss_dssp             SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTT
T ss_pred             CCceEEEEeCCCeEEEEEecCCEEEEEECCCCcEeecccCCccccccCCCCceeeEEeCCC
Confidence            457899999999877765557999999877765332  211      11234678999985


No 101
>d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.71  E-value=5.3  Score=30.39  Aligned_cols=55  Identities=13%  Similarity=0.071  Sum_probs=27.1

Q ss_pred             CCCEEEEeeCC-----CeEEEEeCCCceeeEEecCCccCeeeEEEcCCCCEEEEecCCCc
Q 019006          287 DGSKVTAGSSD-----RMVYIWDTTSRRILYKLPGHTGSVNESVFHATEPVIGSCSSDKQ  341 (347)
Q Consensus       287 ~g~~l~sgs~d-----g~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~  341 (347)
                      ++..++.|+.+     .....+|..+.+....-+.........+...++++++.+|.++.
T Consensus       195 ~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~  254 (288)
T d1zgka1         195 HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITVHQGRIYVLGGYDGH  254 (288)
T ss_dssp             TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSS
T ss_pred             eeeEEEecCccccccccceeeeeecceeeecccCccCcccceEEEEECCEEEEEecCCCC
Confidence            34555555543     35677777665433211111112222222336778888876654


No 102
>d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}
Probab=84.43  E-value=3.7  Score=34.37  Aligned_cols=108  Identities=15%  Similarity=0.184  Sum_probs=59.0

Q ss_pred             CceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEecc--ccccccceEEEEECCC---CCEEEEe-e-----
Q 019006          227 DMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGH--QHNFEKNLLKCGWSPD---GSKVTAG-S-----  295 (347)
Q Consensus       227 ~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~s~~---g~~l~sg-s-----  295 (347)
                      ...++|+|.|+++.+++--..|.|++++.....  .+.+..+...  ...-..-...++|+|+   ..+|... +     
T Consensus        27 ~~P~~la~~pdg~llVter~~G~i~~v~~~~g~--~~~i~~~~~~~~~~~ge~GLLgia~~Pdf~~n~~iYvsyt~~~~~  104 (450)
T d1crua_          27 NKPHALLWGPDNQIWLTERATGKILRVNPESGS--VKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPK  104 (450)
T ss_dssp             SSEEEEEECTTSCEEEEETTTCEEEEECTTTCC--EEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTT
T ss_pred             CCceEEEEeCCCeEEEEEecCCEEEEEECCCCc--EeecccCCccccccCCCCceeeEEeCCCCccCCEEEEEEecCCCC
Confidence            346899999999988886557899998765321  1222222111  0111245678999985   3344332 1     


Q ss_pred             -CC----Ce--EEEEeCCCc-------e-eeEEec---CCccCeeeEEEcCCCCEEEEecC
Q 019006          296 -SD----RM--VYIWDTTSR-------R-ILYKLP---GHTGSVNESVFHATEPVIGSCSS  338 (347)
Q Consensus       296 -~d----g~--i~vwd~~~~-------~-~~~~~~---~h~~~v~~~~~~~~~~~l~s~s~  338 (347)
                       .+    +.  +..+.....       + ++..++   .|.  --.++|.|++.+.++.|.
T Consensus       105 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~i~~~~p~~~~H~--gg~l~fgpDG~LYvs~Gd  163 (450)
T d1crua_         105 STDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQ--SGRLVIGPDQKIYYTIGD  163 (450)
T ss_dssp             C--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCC--EEEEEECTTSCEEEEECC
T ss_pred             CcccccccceEEEeeecccccccccceEEEeeccccccccc--ccceeEcCCCCEEEEecC
Confidence             01    11  223322211       1 111221   233  468899999998888775


No 103
>d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}
Probab=83.27  E-value=11  Score=30.98  Aligned_cols=223  Identities=13%  Similarity=0.112  Sum_probs=105.9

Q ss_pred             ceeEEEEcCCCCEEEEe-cCC----CeEEEEECCCCceeeeeeccCcceeEeecCCCCCCEEEEEcC-------------
Q 019006          102 AILDLHWTTDGSQIISA-SPD----KTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSD-------------  163 (347)
Q Consensus       102 ~v~~~~~~~~~~~l~s~-~~d----g~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~-------------  163 (347)
                      .+..+.++|++++++-+ +.+    -.++++|+.+++.+....... ....+.+.+++..++.+.-.             
T Consensus       126 ~~~~~~~Spd~~~la~s~d~~G~e~~~l~v~Dl~tg~~~~~~i~~~-~~~~~~W~~D~~~~~Y~~~~~~~~~~~~~~~~~  204 (430)
T d1qfma1         126 ALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERV-KFSCMAWTHDGKGMFYNAYPQQDGKSDGTETST  204 (430)
T ss_dssp             EEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEE-CSCCEEECTTSSEEEEEECCCCSSCCSSSCCCC
T ss_pred             eecceEecCCCCEEEEEeccccCchheeEEeccCcceecccccccc-cccceEEcCCCCEEEEEEeccccCccccccccc
Confidence            44566789999988743 333    369999999998664322211 11234455555545444321             


Q ss_pred             --CCceEEEeCCCCCc--eeecC--C-CCceEEEEEcCCCCeEEEEe---cCCc--EEEEeCCCCce--------EEEec
Q 019006          164 --DGTAKLWDMRQRGA--IQTFP--D-KYQITAVSFSDASDKIYTGG---IDND--VKVWDLRKGEV--------SMTLQ  223 (347)
Q Consensus       164 --d~~i~iwd~~~~~~--~~~~~--~-~~~v~~~~~~~~~~~l~~~~---~dg~--i~iwd~~~~~~--------~~~~~  223 (347)
                        ...+..+.+.+...  ...+.  . ...+..+..++++++++...   .+..  +.+.|+.....        .....
T Consensus       205 ~~~~~v~~h~lgt~~~~d~~v~~e~d~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  284 (430)
T d1qfma1         205 NLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLID  284 (430)
T ss_dssp             CCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEEC
T ss_pred             CCcceEEEEECCCCccccccccccccCCceEEeeeccCCcceeeEEeeccCCccEEEEEeeCCCcccccccccceeEeec
Confidence              12456666654322  12222  1 23456677888888876432   2333  34445432110        11111


Q ss_pred             CCCCceeEEEECCCCCEEEEEc---CCCcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEEEEe-eCCC-
Q 019006          224 GHQDMITGMSLSPDGSYLLTNG---MDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAG-SSDR-  298 (347)
Q Consensus       224 ~~~~~i~~v~~~~~~~~l~t~~---~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sg-s~dg-  298 (347)
                      ....... ...+..+.+++...   .++.|...++..... ......+..+.    ..+..-.+...+.+|+.. -.++ 
T Consensus       285 ~~~~~~~-~~~~~~~~~~~~Tn~~a~~~~L~~~~~~~~~~-~~w~~vi~~~~----~~~~~~~~~~~~~~lvl~~~~~~~  358 (430)
T d1qfma1         285 NFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEE-SKWKVLVPEHE----KDVLEWVACVRSNFLVLCYLHDVK  358 (430)
T ss_dssp             SSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTBCCG-GGCEEEECCCS----SCEEEEEEEETTTEEEEEEEETTE
T ss_pred             ccccceE-EEecCCceeecccCcccccceeEEecCCCCcc-ccceEEecccC----cceeeeEEEEECCEEEEEEEcCCE
Confidence            1111122 22222233333332   235666666654321 11122222221    223333344445556544 4554 


Q ss_pred             -eEEEEeCCCceeeEEecCCccCeeeEEEcCCCC
Q 019006          299 -MVYIWDTTSRRILYKLPGHTGSVNESVFHATEP  331 (347)
Q Consensus       299 -~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~  331 (347)
                       .|++++...+........-.+.|..+...++..
T Consensus       359 ~~l~v~~~~~~~~~~~~~~~~~sv~~~~~~~~~~  392 (430)
T d1qfma1         359 NTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDT  392 (430)
T ss_dssp             EEEEEEETTTCCEEEEECCCSSEEEEEECCTTCS
T ss_pred             eEEEEEECCCCcEEEecCCCCceEeeccCCCCCC
Confidence             588899988776544433344555554444443


No 104
>d1wp5a_ b.68.10.1 (A:) Topoisomerase IV subunit A, ParC, C-terminal domain {Bacillus stearothermophilus [TaxId: 1422]}
Probab=61.72  E-value=33  Score=26.72  Aligned_cols=194  Identities=10%  Similarity=0.061  Sum_probs=103.5

Q ss_pred             CCCCEEEEecCCCeEEEEECCCCc----eeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEE---EeCCCC------C
Q 019006          110 TDGSQIISASPDKTLRAWDVETGK----QIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKL---WDMRQR------G  176 (347)
Q Consensus       110 ~~~~~l~s~~~dg~i~iwd~~~~~----~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~i---wd~~~~------~  176 (347)
                      |+...+++-+.+|.|+--++.+.+    .-..+.. ...+..+....... .++.-++.|.+..   |++...      .
T Consensus         3 ~~E~v~v~lS~~GyiKR~~~~~~~~~~~~~~~~k~-~D~v~~~~~~~t~d-~ll~fT~~Grvy~l~v~eiP~~~~~s~G~   80 (323)
T d1wp5a_           3 ASEDVIVTVTKDGYVKRTSLRSYAASNGQDFAMKD-TDRLLAMLEMNTKD-VLLLFTNKGNYLYCPVHELPDIRWKDLGQ   80 (323)
T ss_dssp             SCCEEEEEEETTCEEEEEEHHHHHHTTTCCCCCCT-TCCEEEEEEEETTS-EEEEEETTSEEEEEEGGGSCBCCTTSCCE
T ss_pred             CCCCEEEEEeCCCeEEEeeHHHhhhcCCCCCcccC-CceEEEEEEEcCCC-EEEEEecCCEEEEEeeccCcccccccccc
Confidence            345667888888888865543211    0011111 22222222212222 2333456666554   444422      2


Q ss_pred             ceeec---CCCCceE-EEEEcC--CCCeEEEEecCCcEEEEeCCCC--------ceEEEecCCCCceeEEEECCCCCEEE
Q 019006          177 AIQTF---PDKYQIT-AVSFSD--ASDKIYTGGIDNDVKVWDLRKG--------EVSMTLQGHQDMITGMSLSPDGSYLL  242 (347)
Q Consensus       177 ~~~~~---~~~~~v~-~~~~~~--~~~~l~~~~~dg~i~iwd~~~~--------~~~~~~~~~~~~i~~v~~~~~~~~l~  242 (347)
                      ++..+   .....+. .+...+  ...+++..+..|.++..++..-        .....+. ..+.+..+.+......++
T Consensus        81 pi~~ll~l~~~e~ii~~~~~~~~~~~~~l~~~Tk~G~iKr~~l~~f~~~~~~~g~~~i~L~-~~D~l~~v~~~~~~~~i~  159 (323)
T d1wp5a_          81 HIANIIPIDRDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLK-NDDQVVDVHLTDGMNELF  159 (323)
T ss_dssp             EGGGTSCCCTTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCC-TTCCEEEEEEECSCSEEE
T ss_pred             cceeeecccCCcceEEEeeccccccceeEEEEeehhheeeccHHHhhhhhccchhhhcccc-ccccccceeccCCCeEEE
Confidence            22211   2223333 333332  3568888999999999876321        1122333 234566677766777888


Q ss_pred             EEcCCCcEEEEeCCCCCCcCceeEEEeccccccccceEEE-EECCCCCEEEEeeCCCeEEEEeCC
Q 019006          243 TNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKC-GWSPDGSKVTAGSSDRMVYIWDTT  306 (347)
Q Consensus       243 t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~s~~g~~l~sgs~dg~i~vwd~~  306 (347)
                      .++..|.+..++.......++...-..+....-.+.+... ...+++..|+..+..|..+.-.+.
T Consensus       160 l~t~~G~~lrf~~~~vr~~gr~a~GV~~ikL~~~D~vv~~~~~~~~~~~ll~~T~~G~gKr~~~~  224 (323)
T d1wp5a_         160 LVTHNGYALWFDESEVSIVGVRAAGVKGMNLKEGDYIVSGQLITSKDESIVVATQRGAVKKMKLT  224 (323)
T ss_dssp             EEETTSEEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEECCTTCEEEEEETTSEEEEEEGG
T ss_pred             EEEecceeeEeecccccccCcccccccccccccccccchhhhccccccceeeeeeeheeecccch
Confidence            8899999999987654333322111222211222445544 455677889999999998887654


No 105
>d2hu7a1 b.69.7.2 (A:9-321) Acylamino-acid-releasing enzyme, N-terminal donain {Aeropyrum pernix [TaxId: 56636]}
Probab=59.20  E-value=30  Score=25.42  Aligned_cols=211  Identities=16%  Similarity=0.218  Sum_probs=107.8

Q ss_pred             CCEEEEecCCCeEEEEECCCCceeeeeeccCcceeEeecCCCCCCEEE-E-----EcCCCceEEEeCCCCCceeecCC--
Q 019006          112 GSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVV-S-----GSDDGTAKLWDMRQRGAIQTFPD--  183 (347)
Q Consensus       112 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-s-----~~~d~~i~iwd~~~~~~~~~~~~--  183 (347)
                      .+.|+.+-..|.+.++-+..++.+.-.+.   .+........+-.++. .     |-.-..+.+-+++.....+.+..  
T Consensus        26 d~ll~~~~seG~vni~~l~g~~~vkLtke---PI~~~~~Pk~~ldfi~f~RDV~kGkE~Hai~~~Nlk~~GEE~~i~spk  102 (313)
T d2hu7a1          26 DKLLVVGFSEGSVNAYLYDGGETVKLNRE---PINSVLDPHYGVGRVILVRDVSKGAEQHALFKVNTSRPGEEQRLEAVK  102 (313)
T ss_dssp             TEEEEEEEETTEEEEEEESSSSCEECCSS---CCSEECEECTTBSEEEEEEECSTTSCCEEEEEEETTSTTCEEECTTSC
T ss_pred             CcEEEEEeccceEEEEEEeCCEEEEEecc---cccCcCCCccCcceEEEEeehhcCcceeeEEEEccCCCCeeeEecCCc
Confidence            34677777889999888777665432221   1111111111111111 1     11112344444443232233322  


Q ss_pred             CCceEEEEEcCCCCeEEEEecCCcEEEEeCCCCceEE--EecCC-------CCceeEEEE-CCCCCEEEEEcC-CCcEEE
Q 019006          184 KYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSM--TLQGH-------QDMITGMSL-SPDGSYLLTNGM-DCKLCI  252 (347)
Q Consensus       184 ~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~--~~~~~-------~~~i~~v~~-~~~~~~l~t~~~-d~~i~~  252 (347)
                      .-++.+++.+ +.+..++|+......+|-++.|+...  .+...       .+.|..+.+ .+..+-++++.- .|.+++
T Consensus       103 ~vRI~S~~yd-dk~vvF~Gased~~~LYviegGklrkL~~vPpFsFVtDI~~d~I~G~g~~~g~~~sfF~adl~SG~lri  181 (313)
T d2hu7a1         103 PMRILSGVDT-GEAVVFTGATEDRVALYALDGGGLRELARLPGFGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRV  181 (313)
T ss_dssp             SBEEEEEEEC-SSCEEEEEECSSCEEEEEEETTEEEEEEEESSCEEEEEEETTEEEEEEEEETTEEEEEEEETTTEEEEE
T ss_pred             eEEEEEeeec-CceEEEecccCCceEEEEEeCCceeeeccCCCcceEEeccCCeEEEEeeecCCcceEEEEecccCCEEE
Confidence            2456676665 45677888888888888888776432  22221       123444433 233333555554 677777


Q ss_pred             EeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEEEEeeC---CCeEEEEeCCCceeeE-EecCC------ccCee
Q 019006          253 WDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSS---DRMVYIWDTTSRRILY-KLPGH------TGSVN  322 (347)
Q Consensus       253 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~---dg~i~vwd~~~~~~~~-~~~~h------~~~v~  322 (347)
                      ++-..                   +.+....+.++.+. +++-.   .....-+|.+++.... .++..      .-+|.
T Consensus       182 ~tpke-------------------GS~~~ay~~~gnKV-~sdyEt~gEsywit~D~~s~~yerve~P~kd~~sy~p~~I~  241 (313)
T d2hu7a1         182 FDSGE-------------------GSFSSASISPGMKV-TAGLETAREARLVTVDPRDGSVEDLELPSKDFSSYRPTAIT  241 (313)
T ss_dssp             ECCSS-------------------EEEEEEEECTTSCE-EEEEEESSCEEEEEECTTTCCEEECCCSSCHHHHHCCSEEE
T ss_pred             ecCCC-------------------CcccceeEccCcee-eeccCCCCceEEEEEecccCceeeeecCcccceeecceEEE
Confidence            76442                   23344444554443 33321   1222245777665432 23322      23445


Q ss_pred             eEEEcCCCCEEEEecCCCcEEeec
Q 019006          323 ESVFHATEPVIGSCSSDKQIYLGE  346 (347)
Q Consensus       323 ~~~~~~~~~~l~s~s~D~~i~i~~  346 (347)
                      =+-+.|++++++.+-.||.-.+|.
T Consensus       242 ~~~Y~Pdd~L~iiakrdG~s~lF~  265 (313)
T d2hu7a1         242 WLGYLPDGRLAVVARREGRSAVFI  265 (313)
T ss_dssp             EEEECTTSCEEEEEEETTEEEEEE
T ss_pred             eeeeCCCCcEEEEEecCCchheee
Confidence            566999999999999998877663


No 106
>d1jtdb_ b.69.5.2 (B:) beta-lactamase inhibitor protein-II, BLIP-II {Streptomyces exfoliatus [TaxId: 1905]}
Probab=57.42  E-value=34  Score=25.54  Aligned_cols=218  Identities=10%  Similarity=0.067  Sum_probs=92.7

Q ss_pred             cceeEEEEcCCCCEEEEecCCCeEEEEECCCCceeeeeeccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCceee
Q 019006          101 NAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQT  180 (347)
Q Consensus       101 ~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~~  180 (347)
                      ..|..|+--  ..+.+... ||.|..|-....-++..-......+..+..-   ....+. -.|+.+..|.-........
T Consensus        26 ~~i~~va~G--~~h~~al~-dG~v~~wG~N~~GQlG~~~~~~~~v~~v~~G---~~~~~a-l~dg~v~~wG~~~~gq~~~   98 (273)
T d1jtdb_          26 SGVDAIAGG--YFHGLALK-GGKVLGWGANLNGQLTMPAATQSGVDAIAAG---NYHSLA-LKDGEVIAWGGNEDGQTTV   98 (273)
T ss_dssp             SSEEEEEEC--SSEEEEEE-TTEEEEEECCTTSTTSCCGGGGSCCCEEEEC---SSEEEE-EETTEEEEEECCTTSTTCC
T ss_pred             CCcEEEEcc--CCEEEEEE-CCEEEEEeCCCCCceeeeecccccceEEecC---CCceee-eeeeeeeccCCCcceeecc
Confidence            456666553  22333334 8999999755432221111111222222221   112222 2478999997543221111


Q ss_pred             -cCCCCceEEEEEcCCCCeEEEEecCCcEEEEeCCCCceEEEecCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCC
Q 019006          181 -FPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYA  259 (347)
Q Consensus       181 -~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~  259 (347)
                       ......+..+....  ...+ .-.|+.+..|.................|..++-.  ...++ ...++.+..|-.....
T Consensus        99 ~~~~~~~~~~i~~~~--~~~~-~~~dg~v~~~g~~~~~~~~~~~~~~~~v~~~~~~--~~~~~-~~~~g~~~~~G~~~~g  172 (273)
T d1jtdb_          99 PAEARSGVDAIAAGA--WASY-ALKDGKVIAWGDDSDGQTTVPAEAQSGVTALDGG--VYTAL-AVKNGGVIAWGDNYFG  172 (273)
T ss_dssp             CGGGGSSCCEEEEET--TEEE-EEETTEEEEEECCTTSTTSCCGGGGSSEEEEEEC--SSEEE-EEETTEEEEEECCTTS
T ss_pred             ccccccceeEEeeec--cccc-ccccccceecccCCCCceeeeccCCceEEEEecc--ceeee-eecccceeEeecccCC
Confidence             11112233333322  2222 2357888888643221111111112234444332  22222 3346788888654322


Q ss_pred             CcCceeEEEeccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCC-ceeeEEecCCccCeeeEEEcCCCCEEEEecC
Q 019006          260 PQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTS-RRILYKLPGHTGSVNESVFHATEPVIGSCSS  338 (347)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~-~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~  338 (347)
                      +....        ......+..++..... .++. . ||.|+-|-... +++-.. ......|..++-... ..++.  .
T Consensus       173 ~~~~~--------~~~~~~v~~Is~G~~h-~~~l-~-dG~v~~WG~n~~Gql~~~-~~~~~~v~~I~~G~~-~~~~l--~  237 (273)
T d1jtdb_         173 QTTVP--------AEAQSGVDDVAGGIFH-SLAL-K-DGKVIAWGDNRYKQTTVP-TEALSGVSAIASGEW-YSLAL--K  237 (273)
T ss_dssp             TTSCC--------GGGSSSEEEEEECSSE-EEEE-E-TTEEEEEECCTTSTTCCC-GGGGSSCCEEEECSS-CEEEE--E
T ss_pred             ccccc--------ccccCCccceecccee-eEEE-e-cCcEEEcCCCCCCccCCC-ccCCCCcEEEEeCcc-eEEEE--E
Confidence            21100        0112345555543322 2222 3 78999995422 222111 111234666554333 23433  3


Q ss_pred             CCcEEeec
Q 019006          339 DKQIYLGE  346 (347)
Q Consensus       339 D~~i~i~~  346 (347)
                      ||.|+.|-
T Consensus       238 ~g~v~~WG  245 (273)
T d1jtdb_         238 NGKVIAWG  245 (273)
T ss_dssp             TTEEEEES
T ss_pred             CCEEEEEC
Confidence            78999883


No 107
>d2nt0a1 b.71.1.2 (A:1-77,A:432-497) Glucosylceramidase {Human (Homo sapiens) [TaxId: 9606]}
Probab=56.39  E-value=24  Score=23.80  Aligned_cols=49  Identities=24%  Similarity=0.295  Sum_probs=33.9

Q ss_pred             cceEEEEE-CCCCCEEEEee----CCCeEEEEeCCCceeeEEecCCccCeeeEEEc
Q 019006          277 KNLLKCGW-SPDGSKVTAGS----SDRMVYIWDTTSRRILYKLPGHTGSVNESVFH  327 (347)
Q Consensus       277 ~~~~~~~~-s~~g~~l~sgs----~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~  327 (347)
                      ..+..++| +|||+.++...    .+-.+.|++...+..-..+++|+  |..+.|.
T Consensus        88 ~~L~~vAF~nPDgs~vlVv~N~s~~~~~~~i~~~~~~~~~~~lpa~S--i~T~vw~  141 (143)
T d2nt0a1          88 NDLDAVALMHPDGSAVVVVLNRSSKDVPLTIKDPAVGFLETISPGYS--IHTYLWH  141 (143)
T ss_dssp             CSEEEEEEECTTSCEEEEEEECSSSCEEEEEEETTTEEEEEEECTTE--EEEEEEC
T ss_pred             CcceEEEEECCCCCEEEEEEeCCCCCeEEEEEeCCCCEEEEEeCCCE--EEEEEEe
Confidence            45677788 89998876543    34457788877777777888765  6666664


No 108
>d2hu7a1 b.69.7.2 (A:9-321) Acylamino-acid-releasing enzyme, N-terminal donain {Aeropyrum pernix [TaxId: 56636]}
Probab=55.09  E-value=35  Score=25.01  Aligned_cols=135  Identities=18%  Similarity=0.314  Sum_probs=71.2

Q ss_pred             CCCCEEEEEcCCCceEEEeCCCCCcee--ecCCCCceEE--------EEE-cCCCCeEEEEec-CCcEEEEeCCCCceEE
Q 019006          153 RGPPLVVSGSDDGTAKLWDMRQRGAIQ--TFPDKYQITA--------VSF-SDASDKIYTGGI-DNDVKVWDLRKGEVSM  220 (347)
Q Consensus       153 ~~~~~~~s~~~d~~i~iwd~~~~~~~~--~~~~~~~v~~--------~~~-~~~~~~l~~~~~-dg~i~iwd~~~~~~~~  220 (347)
                      ++...+++|+......+|-+..++...  .++.-.-|+.        +.+ .+...-++++.. .|.+++++...|    
T Consensus       112 ddk~vvF~Gased~~~LYviegGklrkL~~vPpFsFVtDI~~d~I~G~g~~~g~~~sfF~adl~SG~lri~tpkeG----  187 (313)
T d2hu7a1         112 TGEAVVFTGATEDRVALYALDGGGLRELARLPGFGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDSGEG----  187 (313)
T ss_dssp             CSSCEEEEEECSSCEEEEEEETTEEEEEEEESSCEEEEEEETTEEEEEEEEETTEEEEEEEETTTEEEEEECCSSE----
T ss_pred             cCceEEEecccCCceEEEEEeCCceeeeccCCCcceEEeccCCeEEEEeeecCCcceEEEEecccCCEEEecCCCC----
Confidence            455678888888888888887665432  2333222322        222 222233455544 566666665444    


Q ss_pred             EecCCCCceeEEEECCCCCEEEEEc---CCCcEEEEeCCCCCCcCceeEEEecccccc----ccceEEEEECCCCCEEEE
Q 019006          221 TLQGHQDMITGMSLSPDGSYLLTNG---MDCKLCIWDMRPYAPQNRCVKILEGHQHNF----EKNLLKCGWSPDGSKVTA  293 (347)
Q Consensus       221 ~~~~~~~~i~~v~~~~~~~~l~t~~---~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~s~~g~~l~s  293 (347)
                             .++.....+.++. ++.-   .+..+..+|++..+.     ..++-....+    ...+.-+-+.|++++++.
T Consensus       188 -------S~~~ay~~~gnKV-~sdyEt~gEsywit~D~~s~~y-----erve~P~kd~~sy~p~~I~~~~Y~Pdd~L~ii  254 (313)
T d2hu7a1         188 -------SFSSASISPGMKV-TAGLETAREARLVTVDPRDGSV-----EDLELPSKDFSSYRPTAITWLGYLPDGRLAVV  254 (313)
T ss_dssp             -------EEEEEEECTTSCE-EEEEEESSCEEEEEECTTTCCE-----EECCCSSCHHHHHCCSEEEEEEECTTSCEEEE
T ss_pred             -------cccceeEccCcee-eeccCCCCceEEEEEecccCce-----eeeecCcccceeecceEEEeeeeCCCCcEEEE
Confidence                   3444444554332 3221   111222446653211     1111000000    123455668999999999


Q ss_pred             eeCCCeEEEEe
Q 019006          294 GSSDRMVYIWD  304 (347)
Q Consensus       294 gs~dg~i~vwd  304 (347)
                      +-.||.=++|.
T Consensus       255 akrdG~s~lF~  265 (313)
T d2hu7a1         255 ARREGRSAVFI  265 (313)
T ss_dssp             EEETTEEEEEE
T ss_pred             EecCCchheee
Confidence            99999999996


No 109
>d1wp5a_ b.68.10.1 (A:) Topoisomerase IV subunit A, ParC, C-terminal domain {Bacillus stearothermophilus [TaxId: 1422]}
Probab=52.78  E-value=47  Score=25.75  Aligned_cols=236  Identities=10%  Similarity=0.120  Sum_probs=122.0

Q ss_pred             CCCCeEEEeeCCCcEEEEeccC----CCeeeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEE---CCC------Cc
Q 019006           67 PAGTVIASGSHDRDIFLWHVHG----DCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWD---VET------GK  133 (347)
Q Consensus        67 ~~~~~l~s~~~d~~v~~w~~~~----~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd---~~~------~~  133 (347)
                      |+.+.+++-+.+|-|+--.+..    ..... .++. .+.+..+......+.|+.-+..|.++.-.   +-.      |.
T Consensus         3 ~~E~v~v~lS~~GyiKR~~~~~~~~~~~~~~-~~k~-~D~v~~~~~~~t~d~ll~fT~~Grvy~l~v~eiP~~~~~s~G~   80 (323)
T d1wp5a_           3 ASEDVIVTVTKDGYVKRTSLRSYAASNGQDF-AMKD-TDRLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWKDLGQ   80 (323)
T ss_dssp             SCCEEEEEEETTCEEEEEEHHHHHHTTTCCC-CCCT-TCCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTTSCCE
T ss_pred             CCCCEEEEEeCCCeEEEeeHHHhhhcCCCCC-cccC-CceEEEEEEEcCCCEEEEEecCCEEEEEeeccCcccccccccc
Confidence            4556667777777776544320    00000 1111 23344443333344555556667654443   321      22


Q ss_pred             eeeeeec--cCcceeE-eecCC-CCCCEEEEEcCCCceEEEeCCC------CCce--eecCCCCceEEEEEcCCCCeEEE
Q 019006          134 QIKKMAE--HNSFVNS-CCPSR-RGPPLVVSGSDDGTAKLWDMRQ------RGAI--QTFPDKYQITAVSFSDASDKIYT  201 (347)
Q Consensus       134 ~~~~~~~--~~~~v~~-~~~~~-~~~~~~~s~~~d~~i~iwd~~~------~~~~--~~~~~~~~v~~~~~~~~~~~l~~  201 (347)
                      .+..+..  ....+.. +.... .....++..+..|.++-.++..      .+..  ..+.....+..+........++.
T Consensus        81 pi~~ll~l~~~e~ii~~~~~~~~~~~~~l~~~Tk~G~iKr~~l~~f~~~~~~~g~~~i~L~~~D~l~~v~~~~~~~~i~l  160 (323)
T d1wp5a_          81 HIANIIPIDRDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKNDDQVVDVHLTDGMNELFL  160 (323)
T ss_dssp             EGGGTSCCCTTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCTTCCEEEEEEECSCSEEEE
T ss_pred             cceeeecccCCcceEEEeeccccccceeEEEEeehhheeeccHHHhhhhhccchhhhccccccccccceeccCCCeEEEE
Confidence            2222211  1222222 22211 2235677788999999887532      1112  23344556777777777788999


Q ss_pred             EecCCcEEEEeCCCC---------ceEEEecCCCCceeE-EEECCCCCEEEEEcCCCcEEEEeCCCCCCcCce---eEEE
Q 019006          202 GGIDNDVKVWDLRKG---------EVSMTLQGHQDMITG-MSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRC---VKIL  268 (347)
Q Consensus       202 ~~~dg~i~iwd~~~~---------~~~~~~~~~~~~i~~-v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~---~~~~  268 (347)
                      ++..|.+..|+...-         -..+.+.. .+.+.+ ..+.+++..+++.+..|..+.-.+..+..+.+.   +..+
T Consensus       161 ~t~~G~~lrf~~~~vr~~gr~a~GV~~ikL~~-~D~vv~~~~~~~~~~~ll~~T~~G~gKr~~~~e~~~~~RggkGv~~~  239 (323)
T d1wp5a_         161 VTHNGYALWFDESEVSIVGVRAAGVKGMNLKE-GDYIVSGQLITSKDESIVVATQRGAVKKMKLTEFEKATRAKRGVVIL  239 (323)
T ss_dssp             EETTSEEEEEEGGGSCBCCSSCCCEECCCCCT-TCCEEEEEEECCTTCEEEEEETTSEEEEEEGGGSCCCCTTSCCEECS
T ss_pred             EEecceeeEeecccccccCccccccccccccc-ccccchhhhccccccceeeeeeeheeecccchhhccccccccccccc
Confidence            999999999976421         11223332 234443 445567788888898998888766554333221   1112


Q ss_pred             eccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCC
Q 019006          269 EGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTT  306 (347)
Q Consensus       269 ~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~  306 (347)
                      +.... -...+..+....+...|+..+..|.+.-.++.
T Consensus       240 k~~k~-~~~~v~~~~~~~~~d~l~l~T~~g~~~r~~~~  276 (323)
T d1wp5a_         240 RELKA-NPHRISGFVVAQDSDTIYLQTEKSFIETIKVG  276 (323)
T ss_dssp             CCCSS-SCCCEEEEEEECTTCEEEEEETTSCEEEEEGG
T ss_pred             ccccc-ccceeeeeEecCCCCEEEEEeCCCEEEEEEhh
Confidence            11110 01234444444555667777777777766554


No 110
>d1suua_ b.68.10.1 (A:) DNA gyrase A C-terminal domain {Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]}
Probab=42.17  E-value=68  Score=24.50  Aligned_cols=191  Identities=9%  Similarity=0.080  Sum_probs=103.5

Q ss_pred             EEEEecCCCeEEEEECCCCce-------ee--eeeccCcceeEeecCCCCCCEEEEEcCCCceE---EEeCCCCC-----
Q 019006          114 QIISASPDKTLRAWDVETGKQ-------IK--KMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAK---LWDMRQRG-----  176 (347)
Q Consensus       114 ~l~s~~~dg~i~iwd~~~~~~-------~~--~~~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~---iwd~~~~~-----  176 (347)
                      .+++.+.+|.++--...+.+.       +.  .+..+ +.+..+....... .++.-+..|.+.   +|++....     
T Consensus         3 vvv~ls~~GyiKR~~~~~~~~q~rg~~g~~~~~~k~~-D~v~~~~~~~t~d-~ll~fT~~G~~~~i~~~~ip~~~~~~~G   80 (304)
T d1suua_           3 IVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLNDG-DEIVIALCVNTHD-YLFMISNEGKLYLINAYEIKDSSRASKG   80 (304)
T ss_dssp             EEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCTT-CCEEEEEEEETTC-EEEEEETTSEEEEEEGGGSCC-------
T ss_pred             EEEEEECCCeEEEeeHHHHhhccCCCCCcccccccCC-CEEEEEEEecCCC-eEEEEechHhhcChhhhhcccccccccc
Confidence            567888999998877654321       11  12222 2222222212222 334445566554   35554321     


Q ss_pred             -ceee---cCCCCceEEEE-Ec--CCCCeEEEEecCCcEEEEeCCCC-------ceEEEecCCCCceeEEEECCCCCEEE
Q 019006          177 -AIQT---FPDKYQITAVS-FS--DASDKIYTGGIDNDVKVWDLRKG-------EVSMTLQGHQDMITGMSLSPDGSYLL  242 (347)
Q Consensus       177 -~~~~---~~~~~~v~~~~-~~--~~~~~l~~~~~dg~i~iwd~~~~-------~~~~~~~~~~~~i~~v~~~~~~~~l~  242 (347)
                       .+..   +.....+..+. ..  ....+++..+.+|.|+-.++..-       .....+.. .+.+..+.....+..++
T Consensus        81 ~~i~~l~~l~~~e~i~~~~~~~~~~~~~~l~~~T~~G~iKr~~l~~f~~~~~~~~~a~kL~~-~D~lv~v~~~~~~~~v~  159 (304)
T d1suua_          81 QNISELINLGDQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLND-KDFVTSAEIVFKDEKVI  159 (304)
T ss_dssp             CBGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCT-TCCEEEEEEECTTCEEE
T ss_pred             cccceeeeeccccccccccccccccccceEEEEEehhhhhhcccchhhccccccceeecccc-hhhccccccccccceeE
Confidence             1111   12223343332 22  23557888999999998876422       11122222 23455555556677788


Q ss_pred             EEcCCCcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEEEEeeCCCeEEEEeCCC
Q 019006          243 TNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTS  307 (347)
Q Consensus       243 t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~dg~i~vwd~~~  307 (347)
                      ..+..|....++.......++.-.-..+....-.+.+..+...+++.+|+..+.+|..+...+..
T Consensus       160 ~~t~~G~~lrf~~~~v~~~gr~a~Gv~~i~L~~~d~v~~~~~~~~~~~ll~iT~~G~gKr~~~~e  224 (304)
T d1suua_         160 CLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKEGDLFVKVLSVKENPYLLIVSENGYGKRLNMSK  224 (304)
T ss_dssp             EEETTSEEEEEEGGGSCBCCTTBCCEECCCCCTTCCEEEEEECTTCSEEEEEETTSEEEEEEGGG
T ss_pred             eeccccceeeeccccccccCccccceeeecccccccceeeeeccCCceEEEEecCCceEEccchh
Confidence            88889988888876543333222212222222234566666778888999999999999987654


No 111
>d1suua_ b.68.10.1 (A:) DNA gyrase A C-terminal domain {Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]}
Probab=34.88  E-value=89  Score=23.76  Aligned_cols=149  Identities=11%  Similarity=0.082  Sum_probs=85.4

Q ss_pred             CCEEEEEcCCCceEEEeCCCC-----Cce--eecCCCCceEEEEEcCCCCeEEEEecCCcEEEEeCCCC---------ce
Q 019006          155 PPLVVSGSDDGTAKLWDMRQR-----GAI--QTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKG---------EV  218 (347)
Q Consensus       155 ~~~~~s~~~d~~i~iwd~~~~-----~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~---------~~  218 (347)
                      ...++..+.+|.|+-.++..-     ..+  -.+.....+..+........++..+..|....|+...-         ..
T Consensus       107 ~~~l~~~T~~G~iKr~~l~~f~~~~~~~~~a~kL~~~D~lv~v~~~~~~~~v~~~t~~G~~lrf~~~~v~~~gr~a~Gv~  186 (304)
T d1suua_         107 DAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLNDKDFVTSAEIVFKDEKVICLSKKGSAFIFNSRDVRLTNRGTQGVC  186 (304)
T ss_dssp             TCEEEEEETTSEEEEEEGGGGCC----CEECBCCCTTCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTBCCEE
T ss_pred             cceEEEEEehhhhhhcccchhhccccccceeecccchhhccccccccccceeEeeccccceeeeccccccccCcccccee
Confidence            456777889999988765421     111  12233445555666666778888899999888876421         11


Q ss_pred             EEEecCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCce---eEEEeccccccccceEE-EEECCCCCEEEEe
Q 019006          219 SMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRC---VKILEGHQHNFEKNLLK-CGWSPDGSKVTAG  294 (347)
Q Consensus       219 ~~~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~---~~~~~~~~~~~~~~~~~-~~~s~~g~~l~sg  294 (347)
                      ...+.. .+.+..+...+++.++++.+.+|..+...+..+..+.+.   +..+..... -...+.. ...+++ ..++..
T Consensus       187 ~i~L~~-~d~v~~~~~~~~~~~ll~iT~~G~gKr~~~~e~~~~~Rg~~Gv~~~k~~~~-~~~~vv~~~~v~~~-d~i~l~  263 (304)
T d1suua_         187 GMKLKE-GDLFVKVLSVKENPYLLIVSENGYGKRLNMSKISELKRGATGYTSYKKSDK-KAGSVVDAIAVSED-DEILLV  263 (304)
T ss_dssp             CCCCCT-TCCEEEEEECTTCSEEEEEETTSEEEEEEGGGSCBCCTTCCCEECSCTTCT-TTCSEEEEEEECTT-CEEEEE
T ss_pred             eecccc-cccceeeeeccCCceEEEEecCCceEEccchhhhhhcccccccceeecccc-CCCcEEEEEEeCCC-CEEEEE
Confidence            222332 345666666777889999999999999888765433321   111111110 1123333 334444 345556


Q ss_pred             eCCCeEEEEeCC
Q 019006          295 SSDRMVYIWDTT  306 (347)
Q Consensus       295 s~dg~i~vwd~~  306 (347)
                      +.+|.+.-..+.
T Consensus       264 T~~G~~~r~~~~  275 (304)
T d1suua_         264 SKRSKALRTVAG  275 (304)
T ss_dssp             ETTCEEEEEEGG
T ss_pred             eCCCEEEEEEhh
Confidence            666766656543


No 112
>d1q47a_ b.69.12.1 (A:) Semaphorin 3a {Mouse (Mus musculus) [TaxId: 10090]}
Probab=33.85  E-value=1.2e+02  Score=24.96  Aligned_cols=78  Identities=15%  Similarity=0.183  Sum_probs=46.1

Q ss_pred             CeeEecCccccEEEEEEC----CCC--CeEEEeeCCCcEE-EEeccCC-C---e--eeEE--EeCcccceeEEEEcCCCC
Q 019006           49 PIMLLTGHQSAVYTMKFN----PAG--TVIASGSHDRDIF-LWHVHGD-C---K--NFMV--LKGHKNAILDLHWTTDGS  113 (347)
Q Consensus        49 ~~~~~~~h~~~V~~v~~~----~~~--~~l~s~~~d~~v~-~w~~~~~-~---~--~~~~--~~~h~~~v~~~~~~~~~~  113 (347)
                      |+....+.....++|+.+    +++  ..++.|..+|.|+ +...... .   .  .+..  +..+..+|..|.++++++
T Consensus       395 pll~~~~~~~~~T~iav~~v~~~~~~~tV~flGT~~G~l~Kv~~~~~~~~~~~~~~~iee~~~~~~~~pI~~l~l~~~~~  474 (495)
T d1q47a_         395 PIMIKTDVNYQFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQ  474 (495)
T ss_dssp             CSEEESSSSSCEEEEEEEEEECSSCEEEEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTT
T ss_pred             ceEEecCccceeEEEEEEEEeccCCcEEEEEEEcCCCEEEEEEEcCCCCccccceeEEEEEeecCCCCceEEEEEeCCCC
Confidence            334444443344555442    233  4678899999876 3322111 0   0  1111  224666899999999999


Q ss_pred             EEEEecCCCeEEE
Q 019006          114 QIISASPDKTLRA  126 (347)
Q Consensus       114 ~l~s~~~dg~i~i  126 (347)
                      +|+.++.++.++|
T Consensus       475 ~Lyv~t~~~V~~v  487 (495)
T d1q47a_         475 QLYIGSTAGVAQL  487 (495)
T ss_dssp             EEEEEBSSCEEEE
T ss_pred             EEEEEeCCeEEEE
Confidence            9999998887766


No 113
>d1q47a_ b.69.12.1 (A:) Semaphorin 3a {Mouse (Mus musculus) [TaxId: 10090]}
Probab=30.35  E-value=67  Score=26.63  Aligned_cols=55  Identities=15%  Similarity=0.094  Sum_probs=35.9

Q ss_pred             eEEEEecCCcEEE-EeCCCCc-------eEEEe--cCCCCceeEEEECCCCCEEEEEcCCCcEEE
Q 019006          198 KIYTGGIDNDVKV-WDLRKGE-------VSMTL--QGHQDMITGMSLSPDGSYLLTNGMDCKLCI  252 (347)
Q Consensus       198 ~l~~~~~dg~i~i-wd~~~~~-------~~~~~--~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~  252 (347)
                      .++.|+.+|.|.- .-...+.       .+.++  ..+..+|..|.+++++++|+.++.++.+++
T Consensus       423 V~flGT~~G~l~Kv~~~~~~~~~~~~~~~iee~~~~~~~~pI~~l~l~~~~~~Lyv~t~~~V~~v  487 (495)
T d1q47a_         423 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL  487 (495)
T ss_dssp             EEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred             EEEEEcCCCEEEEEEEcCCCCccccceeEEEEEeecCCCCceEEEEEeCCCCEEEEEeCCeEEEE
Confidence            5678999998763 3222111       11222  235567899999999999999998876655


No 114
>d1c8ua2 d.38.1.3 (A:116-286) Thioesterase II (TesB) {Escherichia coli [TaxId: 562]}
Probab=25.93  E-value=16  Score=25.42  Aligned_cols=22  Identities=14%  Similarity=0.138  Sum_probs=11.8

Q ss_pred             EEEECCCCCeEEEeeCCCcEEE
Q 019006           62 TMKFNPAGTVIASGSHDRDIFL   83 (347)
Q Consensus        62 ~v~~~~~~~~l~s~~~d~~v~~   83 (347)
                      .--|+.+|.++||+.++|.+++
T Consensus       148 g~i~~~dG~LvAs~~QEgl~R~  169 (171)
T d1c8ua2         148 GEFYTQDGVLVASTVQEGVMRN  169 (171)
T ss_dssp             EEEEETTCCEEEEEEEEEEEEE
T ss_pred             EEEECCCCCEEEEEEEEEEEEe
Confidence            3345555555555555555554


No 115
>d1c8ua2 d.38.1.3 (A:116-286) Thioesterase II (TesB) {Escherichia coli [TaxId: 562]}
Probab=25.34  E-value=19  Score=25.02  Aligned_cols=29  Identities=10%  Similarity=0.145  Sum_probs=23.6

Q ss_pred             ccCeeeEEEcCCCCEEEEecCCCcEEeec
Q 019006          318 TGSVNESVFHATEPVIGSCSSDKQIYLGE  346 (347)
Q Consensus       318 ~~~v~~~~~~~~~~~l~s~s~D~~i~i~~  346 (347)
                      .+-+..-.|+.+|.++||++..|-|++-|
T Consensus       143 Rgl~~g~i~~~dG~LvAs~~QEgl~R~~~  171 (171)
T d1c8ua2         143 RGFVRGEFYTQDGVLVASTVQEGVMRNHN  171 (171)
T ss_dssp             EEEEEEEEEETTCCEEEEEEEEEEEEECC
T ss_pred             eeEEEEEEECCCCCEEEEEEEEEEEEecC
Confidence            34556667999999999999999998754


No 116
>d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.48  E-value=1.3e+02  Score=21.81  Aligned_cols=50  Identities=4%  Similarity=0.062  Sum_probs=24.8

Q ss_pred             ceEEEeCCCCCcee--ecCCC-CceEEEEEcCCCCeEEEEec---------CCcEEEEeCCCCc
Q 019006          166 TAKLWDMRQRGAIQ--TFPDK-YQITAVSFSDASDKIYTGGI---------DNDVKVWDLRKGE  217 (347)
Q Consensus       166 ~i~iwd~~~~~~~~--~~~~~-~~v~~~~~~~~~~~l~~~~~---------dg~i~iwd~~~~~  217 (347)
                      .+.+||+.+++-..  .++.. .....+.+  .+..++.|+.         -..+.+||..+.+
T Consensus        20 ~~~~yd~~t~~W~~~~~~p~~R~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~   81 (288)
T d1zgka1          20 YLEAYNPSNGTWLRLADLQVPRSGLAGCVV--GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQ   81 (288)
T ss_dssp             CEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCEEEETTEEEECCCEEEEETTTTE
T ss_pred             eEEEEECCCCeEEECCCCCCccceeEEEEE--CCEEEEEeCcccCCCCccccchhhhccccccc
Confidence            46788887764322  23221 11222222  3445555542         2357788877654


No 117
>d1jtdb_ b.69.5.2 (B:) beta-lactamase inhibitor protein-II, BLIP-II {Streptomyces exfoliatus [TaxId: 1905]}
Probab=21.75  E-value=1.4e+02  Score=21.75  Aligned_cols=219  Identities=12%  Similarity=0.054  Sum_probs=92.8

Q ss_pred             cEEEEEECCCCCeEEEeeCCCcEEEEeccCCCeeeEEEeCcccceeEEEEcCCCCEEEEecCCCeEEEEECCCCceeeee
Q 019006           59 AVYTMKFNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKM  138 (347)
Q Consensus        59 ~V~~v~~~~~~~~l~s~~~d~~v~~w~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~  138 (347)
                      .|..|+-. ....++ -. ||.|+.|-.....+. -.-......|..+.--. ...++.  .|+.+..|.....-.....
T Consensus        27 ~i~~va~G-~~h~~a-l~-dG~v~~wG~N~~GQl-G~~~~~~~~v~~v~~G~-~~~~al--~dg~v~~wG~~~~gq~~~~   99 (273)
T d1jtdb_          27 GVDAIAGG-YFHGLA-LK-GGKVLGWGANLNGQL-TMPAATQSGVDAIAAGN-YHSLAL--KDGEVIAWGGNEDGQTTVP   99 (273)
T ss_dssp             SEEEEEEC-SSEEEE-EE-TTEEEEEECCTTSTT-SCCGGGGSCCCEEEECS-SEEEEE--ETTEEEEEECCTTSTTCCC
T ss_pred             CcEEEEcc-CCEEEE-EE-CCEEEEEeCCCCCce-eeeecccccceEEecCC-Cceeee--eeeeeeccCCCcceeeccc
Confidence            46666542 122333 23 788888855322111 00111223445544321 112222  4899999975432111110


Q ss_pred             eccCcceeEeecCCCCCCEEEEEcCCCceEEEeCCCCCcee-ecCCCCceEEEEEcCCCCeEEEEecCCcEEEEeCCCCc
Q 019006          139 AEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQ-TFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGE  217 (347)
Q Consensus       139 ~~~~~~v~~~~~~~~~~~~~~s~~~d~~i~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~  217 (347)
                      ......+..+....   ...+. -.|+.+..|......... .......+..++-.   .+......++.++.|......
T Consensus       100 ~~~~~~~~~i~~~~---~~~~~-~~dg~v~~~g~~~~~~~~~~~~~~~~v~~~~~~---~~~~~~~~~g~~~~~G~~~~g  172 (273)
T d1jtdb_         100 AEARSGVDAIAAGA---WASYA-LKDGKVIAWGDDSDGQTTVPAEAQSGVTALDGG---VYTALAVKNGGVIAWGDNYFG  172 (273)
T ss_dssp             GGGGSSCCEEEEET---TEEEE-EETTEEEEEECCTTSTTSCCGGGGSSEEEEEEC---SSEEEEEETTEEEEEECCTTS
T ss_pred             cccccceeEEeeec---ccccc-cccccceecccCCCCceeeeccCCceEEEEecc---ceeeeeecccceeEeecccCC
Confidence            01111121222111   12222 247888888644322111 11112234444332   233334457888888654321


Q ss_pred             eEEEecCCCCceeEEEECCCCCEEEEEcCCCcEEEEeCCCCCCcCceeEEEeccccccccceEEEEECCCCCEEEEeeCC
Q 019006          218 VSMTLQGHQDMITGMSLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSD  297 (347)
Q Consensus       218 ~~~~~~~~~~~i~~v~~~~~~~~l~t~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~sgs~d  297 (347)
                      ...........|..|+.... ..++. . ||.|.-|=...........        .....+..++-... ..++.  .|
T Consensus       173 ~~~~~~~~~~~v~~Is~G~~-h~~~l-~-dG~v~~WG~n~~Gql~~~~--------~~~~~v~~I~~G~~-~~~~l--~~  238 (273)
T d1jtdb_         173 QTTVPAEAQSGVDDVAGGIF-HSLAL-K-DGKVIAWGDNRYKQTTVPT--------EALSGVSAIASGEW-YSLAL--KN  238 (273)
T ss_dssp             TTSCCGGGSSSEEEEEECSS-EEEEE-E-TTEEEEEECCTTSTTCCCG--------GGGSSCCEEEECSS-CEEEE--ET
T ss_pred             cccccccccCCccceeccce-eeEEE-e-cCcEEEcCCCCCCccCCCc--------cCCCCcEEEEeCcc-eEEEE--EC
Confidence            11111112345777765432 22332 3 7899999543322111110        01122444443322 23333  37


Q ss_pred             CeEEEEeC
Q 019006          298 RMVYIWDT  305 (347)
Q Consensus       298 g~i~vwd~  305 (347)
                      |.|+.|-.
T Consensus       239 g~v~~WG~  246 (273)
T d1jtdb_         239 GKVIAWGS  246 (273)
T ss_dssp             TEEEEEST
T ss_pred             CEEEEECC
Confidence            99999953


No 118
>d1dlpa1 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]}
Probab=21.27  E-value=50  Score=21.02  Aligned_cols=13  Identities=15%  Similarity=0.046  Sum_probs=7.3

Q ss_pred             EEEECCCCCEEEE
Q 019006          281 KCGWSPDGSKVTA  293 (347)
Q Consensus       281 ~~~~s~~g~~l~s  293 (347)
                      .+.+..||++++.
T Consensus        29 ~l~~q~DGNLvL~   41 (115)
T d1dlpa1          29 RFTMQSDCNLVLF   41 (115)
T ss_dssp             EEEECTTSCEEEE
T ss_pred             EEEECCCCeEEEE
Confidence            4455566666554


Done!