Query 019007
Match_columns 347
No_of_seqs 271 out of 1194
Neff 4.8
Searched_HMMs 29240
Date Mon Mar 25 09:27:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019007.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019007hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1f62_A Transcription factor WS 99.5 3.7E-15 1.3E-19 107.5 3.0 49 208-256 2-50 (51)
2 2e6s_A E3 ubiquitin-protein li 99.5 1.3E-14 4.6E-19 114.1 4.4 56 197-255 20-76 (77)
3 3asl_A E3 ubiquitin-protein li 99.5 9.8E-15 3.4E-19 112.7 3.6 57 197-256 12-69 (70)
4 3shb_A E3 ubiquitin-protein li 99.5 1.1E-14 3.8E-19 114.6 3.7 56 197-255 20-76 (77)
5 2e6r_A Jumonji/ARID domain-con 99.5 7.6E-15 2.6E-19 118.8 2.5 59 197-257 9-67 (92)
6 1mm2_A MI2-beta; PHD, zinc fin 99.5 3.2E-14 1.1E-18 106.9 4.5 50 205-257 8-57 (61)
7 2ysm_A Myeloid/lymphoid or mix 99.4 3.8E-14 1.3E-18 117.0 4.6 72 185-258 35-106 (111)
8 2lri_C Autoimmune regulator; Z 99.4 4.1E-14 1.4E-18 108.2 3.4 49 206-257 12-60 (66)
9 1fp0_A KAP-1 corepressor; PHD 99.4 1.7E-13 6E-18 110.5 6.2 50 205-257 24-73 (88)
10 1xwh_A Autoimmune regulator; P 99.4 4.5E-14 1.5E-18 107.4 2.5 51 205-258 7-57 (66)
11 1wev_A Riken cDNA 1110020M19; 99.4 4.1E-14 1.4E-18 113.5 2.2 56 205-260 15-76 (88)
12 2yql_A PHD finger protein 21A; 99.4 7.4E-14 2.5E-18 102.9 3.3 48 205-255 8-55 (56)
13 2kwj_A Zinc finger protein DPF 99.4 7.1E-14 2.4E-18 116.6 3.1 60 196-257 50-109 (114)
14 3v43_A Histone acetyltransfera 99.4 1.4E-13 4.9E-18 114.3 4.9 58 196-255 53-111 (112)
15 2l5u_A Chromodomain-helicase-D 99.4 7.3E-14 2.5E-18 104.9 2.7 49 205-256 10-58 (61)
16 2puy_A PHD finger protein 21A; 99.4 1.2E-13 4E-18 103.1 2.3 50 205-257 4-53 (60)
17 2yt5_A Metal-response element- 99.4 7.7E-14 2.6E-18 105.3 1.1 53 205-257 5-62 (66)
18 3ask_A E3 ubiquitin-protein li 99.3 3.3E-13 1.1E-17 125.3 4.1 56 198-256 169-225 (226)
19 2ku3_A Bromodomain-containing 99.3 1.4E-13 4.8E-18 106.7 0.0 51 205-257 15-67 (71)
20 2l43_A N-teminal domain from h 99.3 5E-13 1.7E-17 107.3 1.8 54 205-260 24-79 (88)
21 3u5n_A E3 ubiquitin-protein li 99.3 2E-12 6.9E-17 117.3 4.0 51 205-258 6-56 (207)
22 3o36_A Transcription intermedi 99.3 2.3E-12 7.8E-17 114.8 4.1 50 206-258 4-53 (184)
23 2ro1_A Transcription intermedi 99.2 7.1E-12 2.4E-16 112.9 4.1 49 206-257 2-50 (189)
24 2k16_A Transcription initiatio 99.1 1.2E-11 4E-16 95.6 1.7 53 205-257 17-69 (75)
25 4gne_A Histone-lysine N-methyl 98.9 6E-10 2.1E-14 92.7 3.6 48 205-257 14-63 (107)
26 1wen_A Inhibitor of growth fam 98.8 2.4E-09 8.4E-14 82.7 5.1 50 205-258 15-67 (71)
27 2lv9_A Histone-lysine N-methyl 98.8 2.1E-09 7.3E-14 87.5 4.9 49 207-257 29-77 (98)
28 2vnf_A ING 4, P29ING4, inhibit 98.8 6.5E-10 2.2E-14 83.2 1.4 47 206-256 10-59 (60)
29 2ysm_A Myeloid/lymphoid or mix 98.8 2E-09 6.7E-14 88.7 4.2 53 205-257 6-58 (111)
30 1weu_A Inhibitor of growth fam 98.8 7.1E-09 2.4E-13 84.0 5.5 50 205-258 35-87 (91)
31 3c6w_A P28ING5, inhibitor of g 98.7 2.1E-09 7E-14 80.3 1.4 47 206-256 9-58 (59)
32 2g6q_A Inhibitor of growth pro 98.7 4E-09 1.4E-13 79.5 1.6 48 206-257 11-61 (62)
33 2jmi_A Protein YNG1, ING1 homo 98.6 1.6E-08 5.6E-13 81.7 2.6 47 205-255 25-75 (90)
34 2lbm_A Transcriptional regulat 98.6 6E-09 2.1E-13 90.6 -0.0 50 205-257 62-118 (142)
35 3o70_A PHD finger protein 13; 98.3 2.5E-07 8.7E-12 70.8 2.9 49 206-256 19-67 (68)
36 1x4i_A Inhibitor of growth pro 98.3 1.2E-07 4.2E-12 73.0 1.0 48 206-257 6-56 (70)
37 3ql9_A Transcriptional regulat 98.3 4.1E-08 1.4E-12 84.2 -2.7 50 205-257 56-112 (129)
38 1we9_A PHD finger family prote 98.2 3.4E-07 1.2E-11 68.4 2.3 55 205-259 5-61 (64)
39 2kwj_A Zinc finger protein DPF 98.2 2.7E-07 9.1E-12 76.7 0.0 51 207-257 2-62 (114)
40 1wee_A PHD finger family prote 98.1 1E-06 3.5E-11 67.6 2.2 51 206-257 16-67 (72)
41 3v43_A Histone acetyltransfera 98.0 4.3E-07 1.5E-11 75.2 -1.1 52 206-257 5-65 (112)
42 1wew_A DNA-binding family prot 98.0 2.4E-06 8E-11 66.6 2.2 51 206-259 16-75 (78)
43 2vpb_A Hpygo1, pygopus homolog 98.0 7.3E-07 2.5E-11 67.7 -0.7 49 205-255 7-65 (65)
44 2xb1_A Pygopus homolog 2, B-ce 98.0 1.3E-06 4.5E-11 71.9 0.6 51 206-258 3-63 (105)
45 1wem_A Death associated transc 97.9 9.7E-07 3.3E-11 68.2 -1.2 50 206-258 16-72 (76)
46 1wep_A PHF8; structural genomi 97.9 3.1E-06 1.1E-10 65.9 1.5 50 206-258 12-65 (79)
47 3o7a_A PHD finger protein 13 v 97.9 3.5E-06 1.2E-10 60.8 1.7 44 211-255 8-51 (52)
48 2rsd_A E3 SUMO-protein ligase 97.9 3.3E-06 1.1E-10 64.1 1.6 48 207-257 11-66 (68)
49 2ri7_A Nucleosome-remodeling f 97.8 1.5E-06 5.3E-11 76.0 -1.6 51 206-257 8-60 (174)
50 2kgg_A Histone demethylase jar 97.7 5.4E-06 1.8E-10 59.9 -0.4 45 208-254 4-52 (52)
51 3kqi_A GRC5, PHD finger protei 97.4 1.4E-05 4.8E-10 61.7 -0.8 52 207-259 11-64 (75)
52 1wil_A KIAA1045 protein; ring 97.3 3.5E-05 1.2E-09 61.7 0.4 51 205-256 14-76 (89)
53 3lqh_A Histone-lysine N-methyl 97.2 9.4E-05 3.2E-09 66.5 1.3 53 207-259 3-66 (183)
54 3kv5_D JMJC domain-containing 96.8 0.00012 4E-09 74.7 -1.3 51 206-259 37-91 (488)
55 4bbq_A Lysine-specific demethy 96.8 0.00042 1.4E-08 56.9 2.0 49 209-257 62-115 (117)
56 3pur_A Lysine-specific demethy 96.6 0.00061 2.1E-08 70.1 1.9 41 217-259 54-97 (528)
57 4gne_A Histone-lysine N-methyl 96.2 0.0026 8.9E-08 52.6 3.4 48 196-250 51-98 (107)
58 3kv4_A PHD finger protein 8; e 95.7 0.00082 2.8E-08 67.9 -2.4 49 209-259 7-59 (447)
59 2ku7_A MLL1 PHD3-CYP33 RRM chi 91.9 0.029 9.8E-07 45.5 -0.1 38 220-257 1-45 (140)
60 3rsn_A SET1/ASH2 histone methy 88.4 0.37 1.3E-05 43.1 4.0 48 212-259 10-62 (177)
61 4ap4_A E3 ubiquitin ligase RNF 88.4 0.025 8.6E-07 45.6 -3.3 104 148-257 6-123 (133)
62 4bbq_A Lysine-specific demethy 85.0 0.13 4.4E-06 41.8 -0.8 37 207-257 8-44 (117)
63 2pv0_B DNA (cytosine-5)-methyl 84.8 0.089 3E-06 52.3 -2.2 50 205-257 92-149 (386)
64 3a1b_A DNA (cytosine-5)-methyl 81.5 0.26 8.7E-06 43.5 -0.4 50 205-257 78-135 (159)
65 1iym_A EL5; ring-H2 finger, ub 71.9 1.7 5.9E-05 29.7 1.8 47 206-256 5-52 (55)
66 1vyx_A ORF K3, K3RING; zinc-bi 70.3 0.32 1.1E-05 35.6 -2.4 51 205-257 5-57 (60)
67 2kiz_A E3 ubiquitin-protein li 66.7 1.2 4.1E-05 32.0 0.0 50 205-258 13-62 (69)
68 2d8s_A Cellular modulator of i 65.5 2.8 9.4E-05 32.2 1.9 50 206-257 15-68 (80)
69 2ecl_A Ring-box protein 2; RNF 62.8 2.3 7.8E-05 32.1 1.0 33 221-257 42-74 (81)
70 2ect_A Ring finger protein 126 62.7 3.7 0.00013 30.1 2.1 50 205-258 14-63 (78)
71 2ct0_A Non-SMC element 1 homol 61.6 2.3 8E-05 32.5 0.8 47 206-256 15-61 (74)
72 1x4j_A Ring finger protein 38; 61.3 0.72 2.5E-05 33.9 -2.1 49 205-257 22-70 (75)
73 2l0b_A E3 ubiquitin-protein li 56.9 1.6 5.5E-05 33.6 -0.9 49 205-257 39-87 (91)
74 2ecm_A Ring finger and CHY zin 54.2 1.8 6.1E-05 29.5 -0.9 47 206-256 5-52 (55)
75 1weq_A PHD finger protein 7; s 53.5 11 0.00038 29.8 3.5 34 219-255 44-78 (85)
76 2xag_B REST corepressor 1; ami 53.0 2.8 9.7E-05 42.7 0.0 19 297-315 99-117 (482)
77 3k1l_B Fancl; UBC, ring, RWD, 51.4 4.6 0.00016 39.9 1.2 53 205-257 307-371 (381)
78 2ysl_A Tripartite motif-contai 48.6 22 0.00076 25.2 4.3 35 144-178 15-51 (73)
79 1v87_A Deltex protein 2; ring- 48.0 2.9 9.8E-05 33.0 -0.7 37 222-258 56-93 (114)
80 2egp_A Tripartite motif-contai 47.4 13 0.00044 26.9 2.9 50 206-258 12-64 (79)
81 2ep4_A Ring finger protein 24; 45.4 3 0.0001 30.2 -0.9 50 206-259 15-64 (74)
82 2ep4_A Ring finger protein 24; 44.4 18 0.00062 25.9 3.3 45 145-191 11-60 (74)
83 2ysj_A Tripartite motif-contai 44.2 19 0.00063 25.1 3.2 34 144-177 15-50 (63)
84 3l11_A E3 ubiquitin-protein li 44.0 8.1 0.00028 30.5 1.4 47 205-257 14-60 (115)
85 3nw0_A Non-structural maintena 43.8 6.1 0.00021 36.3 0.6 46 206-255 180-225 (238)
86 2ecy_A TNF receptor-associated 41.7 4.7 0.00016 28.7 -0.4 46 206-257 15-60 (66)
87 2k1p_A Zinc finger RAN-binding 40.3 10 0.00036 24.5 1.2 13 244-256 3-15 (33)
88 2ecj_A Tripartite motif-contai 39.9 8.6 0.00029 26.1 0.8 44 206-253 15-58 (58)
89 1bor_A Transcription factor PM 38.9 23 0.00079 24.5 3.0 42 206-257 6-47 (56)
90 4a0k_B E3 ubiquitin-protein li 37.0 7.4 0.00025 32.1 0.1 28 225-256 82-109 (117)
91 2lq6_A Bromodomain-containing 34.4 9.6 0.00033 29.8 0.3 30 207-237 18-49 (87)
92 3dpl_R Ring-box protein 1; ubi 34.0 6.7 0.00023 31.5 -0.6 31 222-256 68-98 (106)
93 2lk0_A RNA-binding protein 5; 33.7 9.6 0.00033 24.5 0.2 12 245-256 3-14 (32)
94 2d8t_A Dactylidin, ring finger 32.8 8.5 0.00029 27.7 -0.2 45 206-257 15-59 (71)
95 2ea6_A Ring finger protein 4; 32.3 19 0.00064 25.1 1.6 42 146-189 12-62 (69)
96 2ecv_A Tripartite motif-contai 29.8 7.4 0.00025 28.3 -1.0 50 206-258 19-70 (85)
97 1e4u_A Transcriptional repress 28.4 16 0.00053 27.6 0.6 50 206-259 11-62 (78)
98 1jm7_A BRCA1, breast cancer ty 27.9 11 0.00038 29.1 -0.3 48 206-257 21-68 (112)
99 1v5n_A PDI-like hypothetical p 26.9 24 0.00081 27.6 1.4 32 207-239 48-79 (89)
100 1faq_A RAF-1; transferase, ser 26.6 36 0.0012 23.2 2.2 29 207-237 15-43 (52)
101 2djb_A Polycomb group ring fin 24.3 51 0.0017 23.5 2.8 42 147-190 13-57 (72)
102 4b2u_A S67; toxin, ICK; NMR {S 22.9 21 0.00071 23.4 0.3 14 245-258 16-29 (36)
103 2ecn_A Ring finger protein 141 22.7 15 0.00051 26.1 -0.5 45 206-258 15-59 (70)
104 3fl2_A E3 ubiquitin-protein li 22.3 6.4 0.00022 31.6 -2.8 47 206-258 52-98 (124)
105 6rxn_A Rubredoxin; electron tr 22.1 44 0.0015 23.3 1.9 17 241-258 25-41 (46)
106 4ayc_A E3 ubiquitin-protein li 21.4 11 0.00039 30.8 -1.5 45 206-257 53-97 (138)
107 1e8j_A Rubredoxin; iron-sulfur 21.1 1.2E+02 0.0041 21.5 4.1 13 246-258 35-47 (52)
108 2co8_A NEDD9 interacting prote 20.7 53 0.0018 24.3 2.3 29 207-237 16-44 (82)
No 1
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=99.52 E-value=3.7e-15 Score=107.53 Aligned_cols=49 Identities=35% Similarity=0.946 Sum_probs=46.3
Q ss_pred ccccccccCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCccCccccCC
Q 019007 208 SCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNL 256 (347)
Q Consensus 208 ~C~vC~~~~~~~~lLlCD~Cd~~yH~~CL~PPL~~iP~g~W~Cp~C~~~ 256 (347)
.|.+|+++++.+.||+||.|+++||++|+.|+|.++|+|+|+|+.|...
T Consensus 2 ~C~vC~~~~~~~~ll~Cd~C~~~~H~~Cl~p~l~~~P~g~W~C~~C~~~ 50 (51)
T 1f62_A 2 RCKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPACQPA 50 (51)
T ss_dssp CCTTTCCSSCCSCCEECTTTCCEECHHHHCTTCCSCCSSCCSCTTTSCC
T ss_pred CCCCCCCCCCCCCEEECCCCChhhCcccCCCCcCCCCCCcEECcCcccc
Confidence 6999999988899999999999999999999999999999999999753
No 2
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.49 E-value=1.3e-14 Score=114.05 Aligned_cols=56 Identities=32% Similarity=0.856 Sum_probs=51.3
Q ss_pred cCCccccccccccccccccCCCCCeEEeccCCCCCCCcccCCCCCCCCCC-CccCccccC
Q 019007 197 SGTGHEISVIQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTD-NWLCQCCSN 255 (347)
Q Consensus 197 ~~~~~~~~~~~~C~vC~~~~~~~~lLlCD~Cd~~yH~~CL~PPL~~iP~g-~W~Cp~C~~ 255 (347)
..|.|.++ .|.+|++.++.+.||+||.|+++||++||.|||..+|+| +|||+.|..
T Consensus 20 ~~w~C~~c---~C~vC~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~~ 76 (77)
T 2e6s_A 20 PEKKCHSC---SCRVCGGKHEPNMQLLCDECNVAYHIYCLNPPLDKVPEEEYWYCPSCKT 76 (77)
T ss_dssp SSSCCSSS---SCSSSCCCCCSTTEEECSSSCCEEETTSSSSCCSSCCCSSCCCCTTTCC
T ss_pred CCeECCCC---CCcCcCCcCCCCCEEEcCCCCccccccccCCCccCCCCCCCcCCcCccC
Confidence 45777665 999999988889999999999999999999999999999 999999974
No 3
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=99.49 E-value=9.8e-15 Score=112.70 Aligned_cols=57 Identities=33% Similarity=0.859 Sum_probs=52.4
Q ss_pred cCCccccccccccccccccCCCCCeEEeccCCCCCCCcccCCCCCCCCCC-CccCccccCC
Q 019007 197 SGTGHEISVIQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTD-NWLCQCCSNL 256 (347)
Q Consensus 197 ~~~~~~~~~~~~C~vC~~~~~~~~lLlCD~Cd~~yH~~CL~PPL~~iP~g-~W~Cp~C~~~ 256 (347)
..|.|..+ .|.+|++.++.+.||+||.|+++||++||.|||..+|+| +|+|+.|...
T Consensus 12 ~~w~C~~C---~C~~C~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~~~ 69 (70)
T 3asl_A 12 VNRLCRVC---ACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRND 69 (70)
T ss_dssp TTSCCTTT---SBTTTCCCSCGGGEEECTTTCCEEEGGGSSSCCSSCCSSSCCCCTTTSCC
T ss_pred CCeECCCC---CCcCCCCcCCCCCEEEcCCCCCceecccCCCCcCCCCCCCCcCCcCccCc
Confidence 45888776 899999988888999999999999999999999999999 9999999854
No 4
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens}
Probab=99.48 E-value=1.1e-14 Score=114.60 Aligned_cols=56 Identities=34% Similarity=0.906 Sum_probs=52.2
Q ss_pred cCCccccccccccccccccCCCCCeEEeccCCCCCCCcccCCCCCCCCCCC-ccCccccC
Q 019007 197 SGTGHEISVIQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDN-WLCQCCSN 255 (347)
Q Consensus 197 ~~~~~~~~~~~~C~vC~~~~~~~~lLlCD~Cd~~yH~~CL~PPL~~iP~g~-W~Cp~C~~ 255 (347)
..|.|..+ .|.+|++.++++.||+||.|+++||++||.|||..+|+|+ |||+.|+.
T Consensus 20 ~~W~C~~C---~C~vC~~~~d~~~ll~CD~C~~~yH~~Cl~PpL~~~P~g~~W~C~~C~~ 76 (77)
T 3shb_A 20 VNRLCRVC---ACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRN 76 (77)
T ss_dssp TTSCCTTT---SBTTTCCCSCGGGEEECTTTCCEEETTTSSSCCSSCCSSSCCCCTTTC-
T ss_pred CCCCCCCC---cCCccCCCCCCcceeEeCCCCCccCcccCCCcccCCCCCCceECcCccc
Confidence 56888887 8999999999999999999999999999999999999999 99999975
No 5
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.48 E-value=7.6e-15 Score=118.79 Aligned_cols=59 Identities=29% Similarity=0.697 Sum_probs=52.5
Q ss_pred cCCccccccccccccccccCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCccCccccCCC
Q 019007 197 SGTGHEISVIQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNLN 257 (347)
Q Consensus 197 ~~~~~~~~~~~~C~vC~~~~~~~~lLlCD~Cd~~yH~~CL~PPL~~iP~g~W~Cp~C~~~~ 257 (347)
..|.+.++ ..|.+|+++++.+.||+||.|+++||++||.|||..+|.|+|||+.|+...
T Consensus 9 s~~~~~~~--~~C~vC~~~~~~~~ll~CD~C~~~~H~~Cl~Ppl~~~P~g~W~C~~C~~~~ 67 (92)
T 2e6r_A 9 SSAQFIDS--YICQVCSRGDEDDKLLFCDGCDDNYHIFCLLPPLPEIPRGIWRCPKCILAE 67 (92)
T ss_dssp CCCCCCCC--CCCSSSCCSGGGGGCEECTTTCCEECSSSSSSCCSSCCSSCCCCHHHHHHH
T ss_pred chhhccCC--CCCccCCCcCCCCCEEEcCCCCchhccccCCCCcccCCCCCcCCccCcCcc
Confidence 44666554 789999999888899999999999999999999999999999999998653
No 6
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=99.46 E-value=3.2e-14 Score=106.90 Aligned_cols=50 Identities=30% Similarity=0.897 Sum_probs=45.6
Q ss_pred cccccccccccCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCccCccccCCC
Q 019007 205 VIQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNLN 257 (347)
Q Consensus 205 ~~~~C~vC~~~~~~~~lLlCD~Cd~~yH~~CL~PPL~~iP~g~W~Cp~C~~~~ 257 (347)
.+.+|.+|++++ .||+||.|+++||++|+.|||..+|.|+|+|+.|....
T Consensus 8 ~~~~C~vC~~~g---~ll~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~~~ 57 (61)
T 1mm2_A 8 HMEFCRVCKDGG---ELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTCPA 57 (61)
T ss_dssp SCSSCTTTCCCS---SCBCCSSSCCCBCSSSSSSCCSSCCSSCCCCTTTTTTC
T ss_pred CCCcCCCCCCCC---CEEEcCCCCHHHcccccCCCcCcCCCCccCChhhcCch
Confidence 357899999765 79999999999999999999999999999999998765
No 7
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=99.45 E-value=3.8e-14 Score=117.04 Aligned_cols=72 Identities=31% Similarity=0.663 Sum_probs=61.8
Q ss_pred cccccccccccccCCccccccccccccccccCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCccCccccCCCC
Q 019007 185 ECSVRSVASGEVSGTGHEISVIQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNLNS 258 (347)
Q Consensus 185 ~Cp~~~~t~~~~~~~~~~~~~~~~C~vC~~~~~~~~lLlCD~Cd~~yH~~CL~PPL~~iP~g~W~Cp~C~~~~~ 258 (347)
.|......+..+..|.|.++ .+|.+|++.++++.||+||.|+++||++||.|||..+|+|+|||+.|.....
T Consensus 35 ~Cl~~~~~~~~~~~W~C~~C--~~C~~C~~~~~~~~ll~Cd~C~~~yH~~Cl~ppl~~~P~g~W~C~~C~~c~~ 106 (111)
T 2ysm_A 35 MCLDIAVTPLKRAGWQCPEC--KVCQNCKQSGEDSKMLVCDTCDKGYHTFCLQPVMKSVPTNGWKCKNCRICIS 106 (111)
T ss_dssp TTTTCCCCTTTSTTCCCTTT--CCCTTTCCCSCCTTEEECSSSCCEEEGGGSSSCCSSCCSSCCCCHHHHCCSC
T ss_pred HHhCCccccccccCccCCcC--CcccccCccCCCCCeeECCCCCcHHhHHhcCCccccCCCCCcCCcCCcCcCC
Confidence 45444444444678999988 6899999999889999999999999999999999999999999999987654
No 8
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=99.43 E-value=4.1e-14 Score=108.24 Aligned_cols=49 Identities=31% Similarity=0.621 Sum_probs=44.4
Q ss_pred ccccccccccCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCccCccccCCC
Q 019007 206 IQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNLN 257 (347)
Q Consensus 206 ~~~C~vC~~~~~~~~lLlCD~Cd~~yH~~CL~PPL~~iP~g~W~Cp~C~~~~ 257 (347)
...|.+|++++ .||+||.|+++||++||.|+|..+|.|+|||+.|....
T Consensus 12 ~~~C~vC~~~~---~ll~Cd~C~~~~H~~Cl~P~l~~~P~g~W~C~~C~~~~ 60 (66)
T 2lri_C 12 GARCGVCGDGT---DVLRCTHCAAAFHWRCHFPAGTSRPGTGLRCRSCSGDV 60 (66)
T ss_dssp TCCCTTTSCCT---TCEECSSSCCEECHHHHCTTTCCCCSSSCCCTTTTTCC
T ss_pred CCCcCCCCCCC---eEEECCCCCCceecccCCCccCcCCCCCEECccccCCC
Confidence 46799998765 69999999999999999999999999999999997654
No 9
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=99.42 E-value=1.7e-13 Score=110.47 Aligned_cols=50 Identities=28% Similarity=0.860 Sum_probs=46.0
Q ss_pred cccccccccccCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCccCccccCCC
Q 019007 205 VIQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNLN 257 (347)
Q Consensus 205 ~~~~C~vC~~~~~~~~lLlCD~Cd~~yH~~CL~PPL~~iP~g~W~Cp~C~~~~ 257 (347)
.+.+|.+|++++ .||+||.|+++||++|+.|||..+|.|+|+|+.|....
T Consensus 24 n~~~C~vC~~~g---~LL~CD~C~~~fH~~Cl~PpL~~~P~g~W~C~~C~~~~ 73 (88)
T 1fp0_A 24 SATICRVCQKPG---DLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVLP 73 (88)
T ss_dssp SSSCCSSSCSSS---CCEECTTSSCEECTTSSSTTCCCCCSSSCCCCSCCCCC
T ss_pred CCCcCcCcCCCC---CEEECCCCCCceecccCCCCCCCCcCCCcCCccccCCC
Confidence 357999999886 69999999999999999999999999999999998764
No 10
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=99.41 E-value=4.5e-14 Score=107.42 Aligned_cols=51 Identities=27% Similarity=0.832 Sum_probs=46.2
Q ss_pred cccccccccccCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCccCccccCCCC
Q 019007 205 VIQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNLNS 258 (347)
Q Consensus 205 ~~~~C~vC~~~~~~~~lLlCD~Cd~~yH~~CL~PPL~~iP~g~W~Cp~C~~~~~ 258 (347)
.+.+|.+|+.++ .||+||.|+++||++|+.|||..+|.|+|+|+.|.....
T Consensus 7 ~~~~C~vC~~~g---~ll~CD~C~~~fH~~Cl~ppl~~~P~g~W~C~~C~~~~~ 57 (66)
T 1xwh_A 7 NEDECAVCRDGG---ELICCDGCPRAFHLACLSPPLREIPSGTWRCSSCLQATV 57 (66)
T ss_dssp CCCSBSSSSCCS---SCEECSSCCCEECTTTSSSCCSSCCSSCCCCHHHHHTCC
T ss_pred CCCCCccCCCCC---CEEEcCCCChhhcccccCCCcCcCCCCCeECccccCccc
Confidence 357999999875 799999999999999999999999999999999986653
No 11
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=99.41 E-value=4.1e-14 Score=113.51 Aligned_cols=56 Identities=20% Similarity=0.614 Sum_probs=48.9
Q ss_pred cccccccccccCC--CCCeEEeccCCCCCCCcccCCCCCC----CCCCCccCccccCCCCCc
Q 019007 205 VIQSCKLCGKADN--TSTMLLCDYCDEAFHPSCCNPRIKI----LPTDNWLCQCCSNLNSNV 260 (347)
Q Consensus 205 ~~~~C~vC~~~~~--~~~lLlCD~Cd~~yH~~CL~PPL~~----iP~g~W~Cp~C~~~~~~~ 260 (347)
.+.+|.+|++++. .+.||+||.|+++||++||.|||.. +|.|+|||+.|+......
T Consensus 15 ~~~~C~vC~~~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~~~~~p~g~W~C~~C~~~~~~~ 76 (88)
T 1wev_A 15 MGLACVVCRQMTVASGNQLVECQECHNLYHQDCHKPQVTDKEVNDPRLVWYCARCTRQMKRM 76 (88)
T ss_dssp HCCSCSSSCCCCCCTTCCEEECSSSCCEEETTTSSSCCCHHHHHCTTCCCCCHHHHHHHCCS
T ss_pred CCCcCCCCCCCCCCCCCceEECCCCCCeEcCccCCCcccccccCCCCCCeeCccccchhhhh
Confidence 4579999998864 4789999999999999999999995 999999999998766544
No 12
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.41 E-value=7.4e-14 Score=102.91 Aligned_cols=48 Identities=31% Similarity=0.972 Sum_probs=44.2
Q ss_pred cccccccccccCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCccCccccC
Q 019007 205 VIQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSN 255 (347)
Q Consensus 205 ~~~~C~vC~~~~~~~~lLlCD~Cd~~yH~~CL~PPL~~iP~g~W~Cp~C~~ 255 (347)
.+.+|.+|++++ .||+||.|+++||++|+.|||..+|.|+|+|+.|..
T Consensus 8 ~~~~C~vC~~~g---~ll~Cd~C~~~~H~~Cl~ppl~~~p~g~W~C~~C~~ 55 (56)
T 2yql_A 8 HEDFCSVCRKSG---QLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQD 55 (56)
T ss_dssp SCCSCSSSCCSS---CCEECSSSSCEECSSSSSSCCCSCCCSSCCCHHHHC
T ss_pred CCCCCccCCCCC---eEEEcCCCCcceECccCCCCcCCCCCCceEChhhhC
Confidence 357899999875 799999999999999999999999999999999975
No 13
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=99.40 E-value=7.1e-14 Score=116.62 Aligned_cols=60 Identities=33% Similarity=0.753 Sum_probs=55.0
Q ss_pred ccCCccccccccccccccccCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCccCccccCCC
Q 019007 196 VSGTGHEISVIQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNLN 257 (347)
Q Consensus 196 ~~~~~~~~~~~~~C~vC~~~~~~~~lLlCD~Cd~~yH~~CL~PPL~~iP~g~W~Cp~C~~~~ 257 (347)
...|.|..+ ..|.+|++.++++.||+||.|+++||++||.|||..+|+|+|||+.|....
T Consensus 50 ~~~W~C~~C--~~C~~C~~~~~~~~ll~Cd~C~~~yH~~Cl~ppl~~~P~g~W~C~~C~~~~ 109 (114)
T 2kwj_A 50 TYKWQCIEC--KSCILCGTSENDDQLLFCDDCDRGYHMYCLNPPVAEPPEGSWSCHLCWELL 109 (114)
T ss_dssp HTTCCCGGG--CCCTTTTCCTTTTTEEECSSSCCEEETTTSSSCCSSCCSSCCCCHHHHHHH
T ss_pred CCccCcccc--CccCcccccCCCCceEEcCCCCccccccccCCCccCCCCCCeECccccchh
Confidence 457999988 789999999888999999999999999999999999999999999997543
No 14
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=99.40 E-value=1.4e-13 Score=114.34 Aligned_cols=58 Identities=33% Similarity=0.855 Sum_probs=53.0
Q ss_pred ccCCcccccccccccccccc-CCCCCeEEeccCCCCCCCcccCCCCCCCCCCCccCccccC
Q 019007 196 VSGTGHEISVIQSCKLCGKA-DNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSN 255 (347)
Q Consensus 196 ~~~~~~~~~~~~~C~vC~~~-~~~~~lLlCD~Cd~~yH~~CL~PPL~~iP~g~W~Cp~C~~ 255 (347)
...|.|.++ .+|.+|++. .+++.||+||.|+++||++||.|||..+|+|+|||+.|+.
T Consensus 53 ~~~W~C~~C--~~C~vC~~~~~~~~~ll~Cd~C~~~yH~~Cl~p~l~~~P~~~W~C~~C~~ 111 (112)
T 3v43_A 53 ALRWQCIEC--KTCSSCRDQGKNADNMLFCDSCDRGFHMECCDPPLTRMPKGMWICQICRP 111 (112)
T ss_dssp TSCCCCTTT--CCBTTTCCCCCTTCCCEECTTTCCEECGGGCSSCCSSCCSSCCCCTTTSC
T ss_pred ccccccccC--CccccccCcCCCccceEEcCCCCCeeecccCCCCCCCCCCCCeECCCCCC
Confidence 567999998 789999985 4667999999999999999999999999999999999975
No 15
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=99.40 E-value=7.3e-14 Score=104.90 Aligned_cols=49 Identities=29% Similarity=0.864 Sum_probs=45.0
Q ss_pred cccccccccccCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCccCccccCC
Q 019007 205 VIQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNL 256 (347)
Q Consensus 205 ~~~~C~vC~~~~~~~~lLlCD~Cd~~yH~~CL~PPL~~iP~g~W~Cp~C~~~ 256 (347)
.+.+|.+|++++ .||+||.|+++||++|+.|||..+|.|+|+|+.|...
T Consensus 10 ~~~~C~vC~~~g---~ll~CD~C~~~fH~~Cl~p~l~~~p~g~W~C~~C~~~ 58 (61)
T 2l5u_A 10 HQDYCEVCQQGG---EIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKE 58 (61)
T ss_dssp CCSSCTTTSCCS---SEEECSSSSCEEEHHHHCTTCCSCCCSSCCCTTGGGG
T ss_pred CCCCCccCCCCC---cEEECCCCChhhhhhccCCCCCCCCCCceECcccccc
Confidence 457999999865 7999999999999999999999999999999999764
No 16
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=99.37 E-value=1.2e-13 Score=103.09 Aligned_cols=50 Identities=30% Similarity=0.908 Sum_probs=45.3
Q ss_pred cccccccccccCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCccCccccCCC
Q 019007 205 VIQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNLN 257 (347)
Q Consensus 205 ~~~~C~vC~~~~~~~~lLlCD~Cd~~yH~~CL~PPL~~iP~g~W~Cp~C~~~~ 257 (347)
.+..|.+|++++ .||+||.|+++||++|+.|||..+|.|+|+|+.|....
T Consensus 4 ~~~~C~vC~~~g---~ll~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~~~ 53 (60)
T 2puy_A 4 HEDFCSVCRKSG---QLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQDQM 53 (60)
T ss_dssp CCSSCTTTCCCS---SCEECSSSSCEECGGGSSSCCSSCCCSCCCCHHHHHHH
T ss_pred CCCCCcCCCCCC---cEEEcCCCCcCEECCcCCCCcCCCCCCceEChhccChh
Confidence 357899999875 79999999999999999999999999999999997654
No 17
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=99.37 E-value=7.7e-14 Score=105.33 Aligned_cols=53 Identities=26% Similarity=0.842 Sum_probs=46.5
Q ss_pred ccccccccccc--CCCCCeEEeccCCCCCCCcccCCCCCC--C-CCCCccCccccCCC
Q 019007 205 VIQSCKLCGKA--DNTSTMLLCDYCDEAFHPSCCNPRIKI--L-PTDNWLCQCCSNLN 257 (347)
Q Consensus 205 ~~~~C~vC~~~--~~~~~lLlCD~Cd~~yH~~CL~PPL~~--i-P~g~W~Cp~C~~~~ 257 (347)
.+.+|.+|+.+ .+.+.||+||.|+++||++|+.|||.. + |.|+|||+.|....
T Consensus 5 ~~~~C~vC~~~~~~~~~~ll~Cd~C~~~~H~~C~~p~l~~~~~~p~~~W~C~~C~~~~ 62 (66)
T 2yt5_A 5 SSGVCTICQEEYSEAPNEMVICDKCGQGYHQLCHTPHIDSSVIDSDEKWLCRQCVFAT 62 (66)
T ss_dssp CCCCBSSSCCCCCBTTBCEEECSSSCCEEETTTSSSCCCHHHHHSSCCCCCHHHHHTT
T ss_pred CCCCCCCCCCCCCCCCCCEEECCCCChHHHhhhCCCcccccccCCCCCEECCCCcCcc
Confidence 35799999987 355799999999999999999999987 4 89999999998654
No 18
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=99.35 E-value=3.3e-13 Score=125.35 Aligned_cols=56 Identities=34% Similarity=0.880 Sum_probs=46.2
Q ss_pred CCccccccccccccccccCCCCCeEEeccCCCCCCCcccCCCCCCCCCC-CccCccccCC
Q 019007 198 GTGHEISVIQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTD-NWLCQCCSNL 256 (347)
Q Consensus 198 ~~~~~~~~~~~C~vC~~~~~~~~lLlCD~Cd~~yH~~CL~PPL~~iP~g-~W~Cp~C~~~ 256 (347)
.|.|..+ .|.+|++.++.+.||+||.|+++||++||.|||..+|.| +|+|+.|...
T Consensus 169 ~w~C~~c---~C~vC~~~~~~~~lL~CD~C~~~yH~~CL~PPL~~vP~G~~W~Cp~C~~~ 225 (226)
T 3ask_A 169 NRLCRVC---ACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRND 225 (226)
T ss_dssp TSCCTTT---SCSSSCCCCC--CCEECSSSCCEECSCC--CCCCSCCSSSCCCCGGGC--
T ss_pred CEecCCC---CCcCCCCCCCCCCeEEcCCCCcceeCccCCCCcccCCCCCCCCCcCCcCc
Confidence 4666665 899999998889999999999999999999999999999 9999999753
No 19
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=99.32 E-value=1.4e-13 Score=106.67 Aligned_cols=51 Identities=29% Similarity=0.827 Sum_probs=45.5
Q ss_pred cccccccccccC--CCCCeEEeccCCCCCCCcccCCCCCCCCCCCccCccccCCC
Q 019007 205 VIQSCKLCGKAD--NTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNLN 257 (347)
Q Consensus 205 ~~~~C~vC~~~~--~~~~lLlCD~Cd~~yH~~CL~PPL~~iP~g~W~Cp~C~~~~ 257 (347)
.+..|.+|++++ +++.||+||.|+++||++|++|++ +|+|+|||+.|....
T Consensus 15 ~~~~C~vC~~~~s~~~~~ll~CD~C~~~~H~~Cl~~~~--vP~g~W~C~~C~~~~ 67 (71)
T 2ku3_A 15 EDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPY--IPEGQWLCRHCLQSR 67 (71)
T ss_dssp SSCSCSSSCCCCCCSSSCEEECSSSCCEEEHHHHTCSS--CCSSCCCCHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCEEECCCCCCccccccCCCCc--CCCCCcCCccCcCcC
Confidence 357999999886 778999999999999999999884 999999999998654
No 20
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=99.29 E-value=5e-13 Score=107.33 Aligned_cols=54 Identities=28% Similarity=0.779 Sum_probs=47.3
Q ss_pred cccccccccccC--CCCCeEEeccCCCCCCCcccCCCCCCCCCCCccCccccCCCCCc
Q 019007 205 VIQSCKLCGKAD--NTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNLNSNV 260 (347)
Q Consensus 205 ~~~~C~vC~~~~--~~~~lLlCD~Cd~~yH~~CL~PPL~~iP~g~W~Cp~C~~~~~~~ 260 (347)
++..|.+|+.++ +.+.||+||.|+.+||++|++|++ +|.|+|||+.|.......
T Consensus 24 ~~~~C~vC~~~~s~~~~~ll~CD~C~~~fH~~Cl~p~~--vP~g~W~C~~C~~~~~~~ 79 (88)
T 2l43_A 24 EDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPY--IPEGQWLCRHCLQSRARP 79 (88)
T ss_dssp CCCCCSSCCSSSSCSEEEEEECSSSCCCCCHHHHTCSS--CCSSCCCCHHHHHHTTSC
T ss_pred CCCcCCcCCCCCCCCCCCEEECCCCCchhhcccCCCCc--cCCCceECccccCccchh
Confidence 458999999886 677999999999999999999985 999999999998765443
No 21
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=99.26 E-value=2e-12 Score=117.33 Aligned_cols=51 Identities=25% Similarity=0.858 Sum_probs=46.7
Q ss_pred cccccccccccCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCccCccccCCCC
Q 019007 205 VIQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNLNS 258 (347)
Q Consensus 205 ~~~~C~vC~~~~~~~~lLlCD~Cd~~yH~~CL~PPL~~iP~g~W~Cp~C~~~~~ 258 (347)
.+.+|.+|++++ .||+||+|+++||++|+.|||..+|.|+|+|+.|.....
T Consensus 6 ~~~~C~~C~~~g---~ll~Cd~C~~~~H~~Cl~p~l~~~p~~~W~C~~C~~~~~ 56 (207)
T 3u5n_A 6 NEDWCAVCQNGG---DLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCRDIGK 56 (207)
T ss_dssp SCSSBTTTCCCE---EEEECSSSSCEECTTTSSSCCSSCCSSCCCCTTTSCSSS
T ss_pred CCCCCCCCCCCC---ceEEcCCCCCccCCccCCCCCCCCCCCCEEeCceeCccc
Confidence 357899999887 599999999999999999999999999999999997764
No 22
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A
Probab=99.25 E-value=2.3e-12 Score=114.77 Aligned_cols=50 Identities=30% Similarity=0.905 Sum_probs=45.9
Q ss_pred ccccccccccCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCccCccccCCCC
Q 019007 206 IQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNLNS 258 (347)
Q Consensus 206 ~~~C~vC~~~~~~~~lLlCD~Cd~~yH~~CL~PPL~~iP~g~W~Cp~C~~~~~ 258 (347)
+++|.+|++++ .||+||+|+++||++|+.|+|..+|.|+|+|+.|.....
T Consensus 4 ~~~C~~C~~~g---~ll~Cd~C~~~~H~~C~~p~l~~~p~~~W~C~~C~~~~~ 53 (184)
T 3o36_A 4 EDWCAVCQNGG---ELLCCEKCPKVFHLSCHVPTLTNFPSGEWICTFCRDLSK 53 (184)
T ss_dssp CSSCTTTCCCS---SCEECSSSSCEECTTTSSSCCSSCCSSCCCCTTTSCSSS
T ss_pred CCccccCCCCC---eeeecCCCCcccCccccCCCCCCCCCCCEECccccCccc
Confidence 57899999876 599999999999999999999999999999999987653
No 23
>2ro1_A Transcription intermediary factor 1-beta; KAP, TIF, PHD finger, bromodomain, SUMO, acetylation, alternative splicing, metal-binding, nucleus; NMR {Homo sapiens}
Probab=99.19 E-value=7.1e-12 Score=112.89 Aligned_cols=49 Identities=29% Similarity=0.884 Sum_probs=45.3
Q ss_pred ccccccccccCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCccCccccCCC
Q 019007 206 IQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNLN 257 (347)
Q Consensus 206 ~~~C~vC~~~~~~~~lLlCD~Cd~~yH~~CL~PPL~~iP~g~W~Cp~C~~~~ 257 (347)
++.|.+|++++ .+|+||+|+++||++|+.|+|..+|.|+|+|+.|....
T Consensus 2 ~~~C~~C~~~g---~ll~Cd~C~~~~H~~Cl~p~l~~~p~g~W~C~~C~~~~ 50 (189)
T 2ro1_A 2 ATICRVCQKPG---DLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVLP 50 (189)
T ss_dssp CCCBTTTCCCS---SCCCCTTTCCBCCSTTSTTCCSSCCCTTCCTTTTSCSC
T ss_pred CCcCccCCCCC---ceeECCCCCchhccccCCCCcccCCCCCCCCcCccCCC
Confidence 46899999887 59999999999999999999999999999999998764
No 24
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=99.12 E-value=1.2e-11 Score=95.61 Aligned_cols=53 Identities=32% Similarity=0.634 Sum_probs=47.9
Q ss_pred cccccccccccCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCccCccccCCC
Q 019007 205 VIQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNLN 257 (347)
Q Consensus 205 ~~~~C~vC~~~~~~~~lLlCD~Cd~~yH~~CL~PPL~~iP~g~W~Cp~C~~~~ 257 (347)
...+|.+|++..+.+.||+||.|+.+||+.|+++++..+|.++|+|+.|....
T Consensus 17 ~~~~C~~C~~~~~~~~mi~CD~C~~wfH~~Cv~~~~~~~~~~~w~C~~C~~~~ 69 (75)
T 2k16_A 17 QIWICPGCNKPDDGSPMIGCDDCDDWYHWPCVGIMAAPPEEMQWFCPKCANKI 69 (75)
T ss_dssp EEECBTTTTBCCSSCCEEECSSSSSEEEHHHHTCSSCCCSSSCCCCTTTHHHH
T ss_pred CCcCCCCCCCCCCCCCEEEcCCCCcccccccCCCCccCCCCCCEEChhccCch
Confidence 35789999999887789999999999999999999998888999999997654
No 25
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=98.90 E-value=6e-10 Score=92.65 Aligned_cols=48 Identities=27% Similarity=0.672 Sum_probs=42.5
Q ss_pred cccccccccccCCCCCeEEec--cCCCCCCCcccCCCCCCCCCCCccCccccCCC
Q 019007 205 VIQSCKLCGKADNTSTMLLCD--YCDEAFHPSCCNPRIKILPTDNWLCQCCSNLN 257 (347)
Q Consensus 205 ~~~~C~vC~~~~~~~~lLlCD--~Cd~~yH~~CL~PPL~~iP~g~W~Cp~C~~~~ 257 (347)
.+++|.+|+.++ .||+|| .|+++||++||+ |..+|+|+|||+.|....
T Consensus 14 ~~~~C~~C~~~G---~ll~CD~~~Cp~~fH~~Cl~--L~~~P~g~W~Cp~c~C~~ 63 (107)
T 4gne_A 14 HEDYCFQCGDGG---ELVMCDKKDCPKAYHLLCLN--LTQPPYGKWECPWHQCDE 63 (107)
T ss_dssp SCSSCTTTCCCS---EEEECCSTTCCCEECTGGGT--CSSCCSSCCCCGGGBCTT
T ss_pred CCCCCCcCCCCC---cEeEECCCCCCcccccccCc--CCcCCCCCEECCCCCCCc
Confidence 457999999765 699999 899999999999 999999999999887443
No 26
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=98.85 E-value=2.4e-09 Score=82.73 Aligned_cols=50 Identities=32% Similarity=0.790 Sum_probs=42.5
Q ss_pred cccccccccccCCCCCeEEecc--CC-CCCCCcccCCCCCCCCCCCccCccccCCCC
Q 019007 205 VIQSCKLCGKADNTSTMLLCDY--CD-EAFHPSCCNPRIKILPTDNWLCQCCSNLNS 258 (347)
Q Consensus 205 ~~~~C~vC~~~~~~~~lLlCD~--Cd-~~yH~~CL~PPL~~iP~g~W~Cp~C~~~~~ 258 (347)
...+| +|++..+ +.||.||. |+ .+||+.|++ |..+|.|.|||+.|.....
T Consensus 15 ~~~~C-~C~~~~~-g~MI~CD~~~C~~~wfH~~Cvg--l~~~p~g~w~Cp~C~~~~~ 67 (71)
T 1wen_A 15 EPTYC-LCHQVSY-GEMIGCDNPDCSIEWFHFACVG--LTTKPRGKWFCPRCSQESG 67 (71)
T ss_dssp SCCCS-TTCCCSC-SSEECCSCSSCSCCCEETTTTT--CSSCCSSCCCCTTTSSCSS
T ss_pred CCCEE-ECCCCCC-CCEeEeeCCCCCCccEecccCC--cCcCCCCCEECCCCCcccc
Confidence 45788 7998654 57999999 77 699999999 8999999999999987653
No 27
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=98.84 E-value=2.1e-09 Score=87.54 Aligned_cols=49 Identities=29% Similarity=0.718 Sum_probs=43.2
Q ss_pred cccccccccCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCccCccccCCC
Q 019007 207 QSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNLN 257 (347)
Q Consensus 207 ~~C~vC~~~~~~~~lLlCD~Cd~~yH~~CL~PPL~~iP~g~W~Cp~C~~~~ 257 (347)
..| +|+...+.+.||+||.|+.+||+.|++|++..+|. .|+|+.|....
T Consensus 29 vrC-iC~~~~~~~~mi~Cd~C~~w~H~~C~~~~~~~~p~-~w~C~~C~~~~ 77 (98)
T 2lv9_A 29 TRC-ICGFTHDDGYMICCDKCSVWQHIDCMGIDRQHIPD-TYLCERCQPRN 77 (98)
T ss_dssp CCC-TTSCCSCSSCEEEBTTTCBEEETTTTTCCTTSCCS-SBCCTTTSSSC
T ss_pred EEe-ECCCccCCCcEEEcCCCCCcCcCcCCCCCccCCCC-CEECCCCcCCC
Confidence 457 78888888899999999999999999999988885 89999997554
No 28
>2vnf_A ING 4, P29ING4, inhibitor of growth protein 4; acetylation, alternative splicing, anti-oncogene, cell cycle, coiled C nucleus, zinc, zinc-finger, ING4; HET: M3L; 1.76A {Homo sapiens} SCOP: g.50.1.2 PDB: 2k1j_A 2jmq_A 2qic_A*
Probab=98.83 E-value=6.5e-10 Score=83.16 Aligned_cols=47 Identities=34% Similarity=0.845 Sum_probs=39.9
Q ss_pred ccccccccccCCCCCeEEecc--CC-CCCCCcccCCCCCCCCCCCccCccccCC
Q 019007 206 IQSCKLCGKADNTSTMLLCDY--CD-EAFHPSCCNPRIKILPTDNWLCQCCSNL 256 (347)
Q Consensus 206 ~~~C~vC~~~~~~~~lLlCD~--Cd-~~yH~~CL~PPL~~iP~g~W~Cp~C~~~ 256 (347)
..+| +|++..+ +.||.||. |. .+||+.|++ |..+|.|.|||+.|..+
T Consensus 10 ~~~C-~C~~~~~-g~mi~CD~cdC~~~wfH~~Cvg--l~~~p~g~w~C~~C~~~ 59 (60)
T 2vnf_A 10 PTYC-LCHQVSY-GEMIGCDNPDCSIEWFHFACVG--LTTKPRGKWFCPRCSQE 59 (60)
T ss_dssp CEET-TTTEECC-SEEEECSCTTCSSCEEETGGGT--CSSCCSSCCCCHHHHC-
T ss_pred CCEE-ECCCcCC-CCEEEeCCCCCCCceEehhcCC--CCcCCCCCEECcCccCc
Confidence 4678 8998754 57999999 55 799999999 89999999999999764
No 29
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=98.83 E-value=2e-09 Score=88.69 Aligned_cols=53 Identities=19% Similarity=0.595 Sum_probs=47.5
Q ss_pred cccccccccccCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCccCccccCCC
Q 019007 205 VIQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNLN 257 (347)
Q Consensus 205 ~~~~C~vC~~~~~~~~lLlCD~Cd~~yH~~CL~PPL~~iP~g~W~Cp~C~~~~ 257 (347)
++++|.+|+.+++.+.||+|+.|+++||++|+.|++..++.+.|+|+.|....
T Consensus 6 ~~~~C~~C~~~g~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~W~C~~C~~C~ 58 (111)
T 2ysm_A 6 SGANCAVCDSPGDLLDQFFCTTCGQHYHGMCLDIAVTPLKRAGWQCPECKVCQ 58 (111)
T ss_dssp CCSCBTTTCCCCCTTTSEECSSSCCEECTTTTTCCCCTTTSTTCCCTTTCCCT
T ss_pred CCCCCcCCCCCCCCcCCeECCCCCCCcChHHhCCccccccccCccCCcCCccc
Confidence 35799999999887889999999999999999999988889999999987443
No 30
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=98.76 E-value=7.1e-09 Score=83.97 Aligned_cols=50 Identities=32% Similarity=0.790 Sum_probs=42.5
Q ss_pred cccccccccccCCCCCeEEecc--CC-CCCCCcccCCCCCCCCCCCccCccccCCCC
Q 019007 205 VIQSCKLCGKADNTSTMLLCDY--CD-EAFHPSCCNPRIKILPTDNWLCQCCSNLNS 258 (347)
Q Consensus 205 ~~~~C~vC~~~~~~~~lLlCD~--Cd-~~yH~~CL~PPL~~iP~g~W~Cp~C~~~~~ 258 (347)
...+| +|++..+ +.||.||. |+ .+||+.|++ |..+|.+.|||+.|.....
T Consensus 35 e~~yC-iC~~~~~-g~MI~CD~~dC~~~WfH~~CVg--l~~~p~g~W~Cp~C~~~~~ 87 (91)
T 1weu_A 35 EPTYC-LCHQVSY-GEMIGCDNPDCSIEWFHFACVG--LTTKPRGKWFCPRCSQESG 87 (91)
T ss_dssp CCBCS-TTCCBCC-SCCCCCSCSSCSCCCCCSTTTT--CSSCCCSSCCCTTTCCCCS
T ss_pred CCcEE-ECCCCCC-CCEeEecCCCCCCCCEecccCC--cCcCCCCCEECcCccCcCC
Confidence 45788 9998664 57999999 66 799999999 8899999999999987654
No 31
>3c6w_A P28ING5, inhibitor of growth protein 5; chromatin, PHD, ING, epigenetics, alternative splicing, metal-binding, phosphoprotein, zinc; HET: M3L; 1.75A {Homo sapiens} PDB: 2pnx_A*
Probab=98.74 E-value=2.1e-09 Score=80.31 Aligned_cols=47 Identities=32% Similarity=0.829 Sum_probs=40.5
Q ss_pred ccccccccccCCCCCeEEecc--CC-CCCCCcccCCCCCCCCCCCccCccccCC
Q 019007 206 IQSCKLCGKADNTSTMLLCDY--CD-EAFHPSCCNPRIKILPTDNWLCQCCSNL 256 (347)
Q Consensus 206 ~~~C~vC~~~~~~~~lLlCD~--Cd-~~yH~~CL~PPL~~iP~g~W~Cp~C~~~ 256 (347)
..+| +|++..+ +.||.||. |+ .+||+.|++ |...|.|.|||+.|..+
T Consensus 9 ~~yC-~C~~~~~-g~mi~CD~~~C~~~wfH~~Cvg--l~~~p~~~w~Cp~C~~~ 58 (59)
T 3c6w_A 9 PTYC-LCHQVSY-GEMIGCDNPDCPIEWFHFACVD--LTTKPKGKWFCPRCVQE 58 (59)
T ss_dssp CEET-TTTEECC-SEEEECSCTTCSSCEEETGGGT--CSSCCSSCCCCHHHHCC
T ss_pred CcEE-ECCCCCC-CCeeEeeCCCCCCCCEecccCC--cccCCCCCEECcCccCc
Confidence 4678 8998654 57999999 66 699999999 89999999999999764
No 32
>2g6q_A Inhibitor of growth protein 2; protein-peptide complex, gene regulation, apoptosis; HET: M3L; 2.00A {Mus musculus}
Probab=98.68 E-value=4e-09 Score=79.50 Aligned_cols=48 Identities=33% Similarity=0.736 Sum_probs=40.6
Q ss_pred ccccccccccCCCCCeEEeccCC---CCCCCcccCCCCCCCCCCCccCccccCCC
Q 019007 206 IQSCKLCGKADNTSTMLLCDYCD---EAFHPSCCNPRIKILPTDNWLCQCCSNLN 257 (347)
Q Consensus 206 ~~~C~vC~~~~~~~~lLlCD~Cd---~~yH~~CL~PPL~~iP~g~W~Cp~C~~~~ 257 (347)
..+| +|++..+ +.||.||.|+ ..||+.|++ |...|.|.|||+.|...+
T Consensus 11 ~~yC-~C~~~~~-g~MI~CD~c~C~~~WfH~~Cvg--l~~~p~~~w~Cp~C~~~r 61 (62)
T 2g6q_A 11 PTYC-LCNQVSY-GEMIGCDNEQCPIEWFHFSCVS--LTYKPKGKWYCPKCRGDN 61 (62)
T ss_dssp CEET-TTTEECC-SEEEECSCTTCSSCEEETGGGT--CSSCCSSCCCCHHHHTCC
T ss_pred CcEE-ECCCCCC-CCeeeeeCCCCCcccEecccCC--cCcCCCCCEECcCcccCC
Confidence 4678 8998654 4799999955 999999999 788999999999997653
No 33
>2jmi_A Protein YNG1, ING1 homolog 1; PHD, histone, recognition, yeast, protein binding; NMR {Saccharomyces cerevisiae} PDB: 2jmj_A*
Probab=98.58 E-value=1.6e-08 Score=81.66 Aligned_cols=47 Identities=30% Similarity=0.724 Sum_probs=40.2
Q ss_pred cccccccccccCCCCCeEEeccCC---CCCCCcccCCCCCCCCCCCccCcc-ccC
Q 019007 205 VIQSCKLCGKADNTSTMLLCDYCD---EAFHPSCCNPRIKILPTDNWLCQC-CSN 255 (347)
Q Consensus 205 ~~~~C~vC~~~~~~~~lLlCD~Cd---~~yH~~CL~PPL~~iP~g~W~Cp~-C~~ 255 (347)
+..+| +|++..+ +.||.||.|+ .+||+.|++ |...|.|.|||+. |..
T Consensus 25 ~~~yC-iC~~~~~-g~MI~CD~c~C~~eWfH~~CVg--l~~~p~~~W~Cp~cC~~ 75 (90)
T 2jmi_A 25 EEVYC-FCRNVSY-GPMVACDNPACPFEWFHYGCVG--LKQAPKGKWYCSKDCKE 75 (90)
T ss_dssp CSCCS-TTTCCCS-SSEECCCSSSCSCSCEETTTSS--CSSCTTSCCCSSHHHHH
T ss_pred CCcEE-EeCCCCC-CCEEEecCCCCccccCcCccCC--CCcCCCCCccCChhhcc
Confidence 34678 8998655 3699999977 899999999 8899999999999 973
No 34
>2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A
Probab=98.58 E-value=6e-09 Score=90.64 Aligned_cols=50 Identities=22% Similarity=0.731 Sum_probs=44.4
Q ss_pred cccccccccccCCCCCeEEeccCCCCCCCcccCCCCC-----C--CCCCCccCccccCCC
Q 019007 205 VIQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIK-----I--LPTDNWLCQCCSNLN 257 (347)
Q Consensus 205 ~~~~C~vC~~~~~~~~lLlCD~Cd~~yH~~CL~PPL~-----~--iP~g~W~Cp~C~~~~ 257 (347)
.+++|.+|+.++ .||+||.|+++||..|+.|+|. + .|.|+|+|+.|....
T Consensus 62 ~~d~C~vC~~GG---~LlcCD~Cpr~Fh~~Cl~p~l~~~~l~~i~~p~~~W~C~~C~~~p 118 (142)
T 2lbm_A 62 MDEQCRWCAEGG---NLICCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHPEP 118 (142)
T ss_dssp CBCSCSSSCCCS---SEEECSSSCCEEEHHHHHHHTCHHHHHHHHTSTTCCCCTTTCCCT
T ss_pred CCCeecccCCCC---cEEeCCCCCCeeeHhhcCCCCChhhhhhcccCCCCCEeecccCcc
Confidence 458999999988 6999999999999999999986 2 589999999998654
No 35
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=98.31 E-value=2.5e-07 Score=70.76 Aligned_cols=49 Identities=29% Similarity=0.683 Sum_probs=41.3
Q ss_pred ccccccccccCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCccCccccCC
Q 019007 206 IQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNL 256 (347)
Q Consensus 206 ~~~C~vC~~~~~~~~lLlCD~Cd~~yH~~CL~PPL~~iP~g~W~Cp~C~~~ 256 (347)
..+| +|++..+.+.||.||.|+..||..|++.....+| +.|+|+.|...
T Consensus 19 ~~~C-iC~~~~~~~~MIqCd~C~~WfH~~Cvgi~~~~~~-~~~~C~~C~~s 67 (68)
T 3o70_A 19 LVTC-FCMKPFAGRPMIECNECHTWIHLSCAKIRKSNVP-EVFVCQKCRDS 67 (68)
T ss_dssp CCCS-TTCCCCTTCCEEECTTTCCEEETTTTTCCTTSCC-SSCCCHHHHTC
T ss_pred ceEe-ECCCcCCCCCEEECCCCCccccccccCcCcccCC-CcEECCCCCCC
Confidence 4678 9999887778999999999999999996655454 68999999754
No 36
>1x4i_A Inhibitor of growth protein 3; structural genomics, PHD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.30 E-value=1.2e-07 Score=72.97 Aligned_cols=48 Identities=29% Similarity=0.685 Sum_probs=39.8
Q ss_pred ccccccccccCCCCCeEEeccCC---CCCCCcccCCCCCCCCCCCccCccccCCC
Q 019007 206 IQSCKLCGKADNTSTMLLCDYCD---EAFHPSCCNPRIKILPTDNWLCQCCSNLN 257 (347)
Q Consensus 206 ~~~C~vC~~~~~~~~lLlCD~Cd---~~yH~~CL~PPL~~iP~g~W~Cp~C~~~~ 257 (347)
..+|. |++..+ +.||.||.|+ ..||+.|+. |...|.+.|||+.|....
T Consensus 6 ~~yC~-C~~~~~-g~MI~CD~cdC~~~WfH~~Cvg--l~~~p~~~w~Cp~C~~~~ 56 (70)
T 1x4i_A 6 SGYCI-CNQVSY-GEMVGCDNQDCPIEWFHYGCVG--LTEAPKGKWYCPQCTAAM 56 (70)
T ss_dssp CCCST-TSCCCC-SSEECCSCTTCSCCCEEHHHHT--CSSCCSSCCCCHHHHHHH
T ss_pred CeEEE-cCCCCC-CCEeEeCCCCCCccCCcccccc--cCcCCCCCEECCCCCccc
Confidence 35674 887654 4899999986 899999999 788899999999997654
No 37
>3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A
Probab=98.26 E-value=4.1e-08 Score=84.16 Aligned_cols=50 Identities=22% Similarity=0.785 Sum_probs=43.3
Q ss_pred cccccccccccCCCCCeEEeccCCCCCCCcccCCCC-----CCC--CCCCccCccccCCC
Q 019007 205 VIQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRI-----KIL--PTDNWLCQCCSNLN 257 (347)
Q Consensus 205 ~~~~C~vC~~~~~~~~lLlCD~Cd~~yH~~CL~PPL-----~~i--P~g~W~Cp~C~~~~ 257 (347)
.+.+|.+|+.++ .+++||.|+++||..|+.|++ .++ |.+.|+|..|....
T Consensus 56 ~~~~C~vC~dGG---~LlcCd~Cpr~Fc~~Cl~~~lg~~~l~~i~~~~~~W~C~~C~~~p 112 (129)
T 3ql9_A 56 MDEQCRWCAEGG---NLICCDFCHNAFCKKCILRNLGRRELSTIMDENNQWYCYICHPEP 112 (129)
T ss_dssp CBSSCTTTCCCS---EEEECSSSSCEEEHHHHHHHTCHHHHHHHTCTTSCCCCTTTCCGG
T ss_pred CCCcCeecCCCC---eeEecCCCchhhhHHHhCCCcchhHHHHhccCCCCeEcCCcCCHH
Confidence 457899999987 699999999999999999985 354 88999999997654
No 38
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=98.24 E-value=3.4e-07 Score=68.40 Aligned_cols=55 Identities=24% Similarity=0.544 Sum_probs=42.8
Q ss_pred cccccccccccCC-CCCeEEeccCCCCCCCcccCCCCCCCC-CCCccCccccCCCCC
Q 019007 205 VIQSCKLCGKADN-TSTMLLCDYCDEAFHPSCCNPRIKILP-TDNWLCQCCSNLNSN 259 (347)
Q Consensus 205 ~~~~C~vC~~~~~-~~~lLlCD~Cd~~yH~~CL~PPL~~iP-~g~W~Cp~C~~~~~~ 259 (347)
+..+|.+|++..+ ...|+.||.|+..||..|++....... .+.|+|+.|..+...
T Consensus 5 e~~~C~~C~~~~~~~~~mI~Cd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~k~~~ 61 (64)
T 1we9_A 5 SSGQCGACGESYAADEFWICCDLCEMWFHGKCVKITPARAEHIKQYKCPSCSNKSGP 61 (64)
T ss_dssp SCCCCSSSCCCCCSSSCEEECSSSCCEEETTTTTCCTTGGGGCSSCCCHHHHTTTCS
T ss_pred CCCCCCCCCCccCCCCCEEEccCCCCCCCccccCcChhHhcCCCcEECCCCcCcCCC
Confidence 3468999998764 578999999999999999995433322 368999999876543
No 39
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=98.15 E-value=2.7e-07 Score=76.74 Aligned_cols=51 Identities=22% Similarity=0.604 Sum_probs=41.4
Q ss_pred cccccccccC-------CCCCeEEeccCCCCCCCcccCCCCC---CCCCCCccCccccCCC
Q 019007 207 QSCKLCGKAD-------NTSTMLLCDYCDEAFHPSCCNPRIK---ILPTDNWLCQCCSNLN 257 (347)
Q Consensus 207 ~~C~vC~~~~-------~~~~lLlCD~Cd~~yH~~CL~PPL~---~iP~g~W~Cp~C~~~~ 257 (347)
.+|.+|..++ +.+.||+|+.|++.||+.||.+++. .++.+.|+|+.|....
T Consensus 2 ~~C~~C~~~~~~n~k~g~~~~Li~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~~C~ 62 (114)
T 2kwj_A 2 SYCDFCLGGSNMNKKSGRPEELVSCADCGRSGHPTCLQFTLNMTEAVKTYKWQCIECKSCI 62 (114)
T ss_dssp CCCSSSCCBTTBCTTTCCCCCCEECSSSCCEECTTTTTCCHHHHHHHHHTTCCCGGGCCCT
T ss_pred CcCccCCCCccccccCCCCCCCeEeCCCCCccchhhCCChhhhhhccCCCccCccccCccC
Confidence 4788887654 4569999999999999999997743 5788999999996554
No 40
>1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=98.09 E-value=1e-06 Score=67.57 Aligned_cols=51 Identities=29% Similarity=0.598 Sum_probs=40.0
Q ss_pred ccccccccccCCC-CCeEEeccCCCCCCCcccCCCCCCCCCCCccCccccCCC
Q 019007 206 IQSCKLCGKADNT-STMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNLN 257 (347)
Q Consensus 206 ~~~C~vC~~~~~~-~~lLlCD~Cd~~yH~~CL~PPL~~iP~g~W~Cp~C~~~~ 257 (347)
..+| +|++..+. ..||.||.|...||..|+...........|+|+.|....
T Consensus 16 ~~~C-~C~~~~~~g~~mI~Cd~C~~W~H~~Cvg~~~~~~~~~~~~C~~C~~~~ 67 (72)
T 1wee_A 16 KVDC-KCGTKDDDGERMLACDGCGVWHHTRCIGINNADALPSKFLCFRCIELS 67 (72)
T ss_dssp EECC-TTCCCSCCSSCEEECSSSCEEEETTTTTCCTTSCCCSCCCCHHHHHHC
T ss_pred ceEe-eCCCccCCCCcEEECCCCCCccCCeeeccCccccCCCcEECCCccCCC
Confidence 4678 69988654 479999999999999999955332334789999998654
No 41
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=98.03 E-value=4.3e-07 Score=75.16 Aligned_cols=52 Identities=23% Similarity=0.607 Sum_probs=41.1
Q ss_pred cccccccccc------CCCCCeEEeccCCCCCCCcccCC--CC-CCCCCCCccCccccCCC
Q 019007 206 IQSCKLCGKA------DNTSTMLLCDYCDEAFHPSCCNP--RI-KILPTDNWLCQCCSNLN 257 (347)
Q Consensus 206 ~~~C~vC~~~------~~~~~lLlCD~Cd~~yH~~CL~P--PL-~~iP~g~W~Cp~C~~~~ 257 (347)
..+|.+|... +..+.||.|+.|++.||++||.. ++ ..++.+.|+|+.|+...
T Consensus 5 ~~~C~~C~~~~~~~~~g~~~~Ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~~C~ 65 (112)
T 3v43_A 5 IPICSFCLGTKEQNREKKPEELISCADCGNSGHPSCLKFSPELTVRVKALRWQCIECKTCS 65 (112)
T ss_dssp CSSBTTTCCCTTCCTTSCCCCCEECTTTCCEECHHHHTCCHHHHHHHHTSCCCCTTTCCBT
T ss_pred CccccccCCchhhCcCCCchhceEhhhcCCCCCCchhcCCHHHHHHhhccccccccCCccc
Confidence 3678888765 35568999999999999999974 22 35688999999997554
No 42
>1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=97.97 E-value=2.4e-06 Score=66.63 Aligned_cols=51 Identities=24% Similarity=0.627 Sum_probs=41.7
Q ss_pred ccccccccccCCCCCeEEec--cCCCCCCCcccCCCCCCCCC-------CCccCccccCCCCC
Q 019007 206 IQSCKLCGKADNTSTMLLCD--YCDEAFHPSCCNPRIKILPT-------DNWLCQCCSNLNSN 259 (347)
Q Consensus 206 ~~~C~vC~~~~~~~~lLlCD--~Cd~~yH~~CL~PPL~~iP~-------g~W~Cp~C~~~~~~ 259 (347)
..+| +|+...+...|+.|| .|...||..|++ |...+. ..|+|+.|.....+
T Consensus 16 ~~~C-iC~~~~~~g~MI~CD~~~C~~W~H~~CVg--i~~~~~~~~~~~~~~~~C~~C~~~~~~ 75 (78)
T 1wew_A 16 KVRC-VCGNSLETDSMIQCEDPRCHVWQHVGCVI--LPDKPMDGNPPLPESFYCEICRLTSGP 75 (78)
T ss_dssp CCCC-SSCCCCCCSCEEECSSTTTCCEEEHHHHS--CCCTTTCSCSCSCSSCCCHHHHHCCSC
T ss_pred CEEe-ECCCcCCCCCEEEECCccCCccccCEEEc--cccccccccccCCCCEECCCCCcccCC
Confidence 4678 799987778999999 999999999999 554442 58999999876543
No 43
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=97.97 E-value=7.3e-07 Score=67.73 Aligned_cols=49 Identities=22% Similarity=0.693 Sum_probs=40.0
Q ss_pred cccccccccccC-CCCCeEEec-cCCCCCCCcccCCCCCC--------CCCCCccCccccC
Q 019007 205 VIQSCKLCGKAD-NTSTMLLCD-YCDEAFHPSCCNPRIKI--------LPTDNWLCQCCSN 255 (347)
Q Consensus 205 ~~~~C~vC~~~~-~~~~lLlCD-~Cd~~yH~~CL~PPL~~--------iP~g~W~Cp~C~~ 255 (347)
....|.+|++.. +...|+.|| .|+..||..|++ |+. .|.+.|+|+.|..
T Consensus 7 ~~~~C~~C~~p~~~~~~mI~CD~~C~~WfH~~Cvg--lt~~~~~~l~~e~~~~w~C~~C~~ 65 (65)
T 2vpb_A 7 PVYPCGICTNEVNDDQDAILCEASCQKWFHRICTG--MTETAYGLLTAEASAVWGCDTCMA 65 (65)
T ss_dssp --CBCTTTCSBCCTTSCEEEBTTTTCCEEEHHHHT--CCHHHHHHHHHCTTEEECCHHHHC
T ss_pred CcCcCccCCCccCCCCCeEecccCccccCchhccC--CCHHHHHHhhccCCCcEECcCccC
Confidence 356899999974 456899999 999999999999 554 3778999999963
No 44
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=97.96 E-value=1.3e-06 Score=71.91 Aligned_cols=51 Identities=22% Similarity=0.676 Sum_probs=41.5
Q ss_pred ccccccccccC-CCCCeEEec-cCCCCCCCcccCCCCCC--------CCCCCccCccccCCCC
Q 019007 206 IQSCKLCGKAD-NTSTMLLCD-YCDEAFHPSCCNPRIKI--------LPTDNWLCQCCSNLNS 258 (347)
Q Consensus 206 ~~~C~vC~~~~-~~~~lLlCD-~Cd~~yH~~CL~PPL~~--------iP~g~W~Cp~C~~~~~ 258 (347)
...|.+|++.- +.+.|+.|| .|+..||..|++ |+. .|.+.|+|+.|.....
T Consensus 3 ~~~C~iC~~p~~~~~~mi~Cdd~C~~WfH~~CVg--lt~~~~~~i~~~~~~~~~Cp~C~~~~~ 63 (105)
T 2xb1_A 3 VYPCGACRSEVNDDQDAILCEASCQKWFHRECTG--MTESAYGLLTTEASAVWACDLCLKTKE 63 (105)
T ss_dssp CCBCTTTCSBCCTTSCEEECTTTTCCEEEGGGTT--CCHHHHHHHHHCTTEEECCHHHHHTTT
T ss_pred cCCCCCCCCccCCCCCEEEecCCcccccccccCC--cCHHHHHhhccCCCCCEECccccCcCC
Confidence 35799999973 445799998 999999999999 553 3678999999987653
No 45
>1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2
Probab=97.89 E-value=9.7e-07 Score=68.20 Aligned_cols=50 Identities=30% Similarity=0.784 Sum_probs=40.4
Q ss_pred ccccccccccCCCCCeEEeccCCCCCCCcccCCCCCCC-------CCCCccCccccCCCC
Q 019007 206 IQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKIL-------PTDNWLCQCCSNLNS 258 (347)
Q Consensus 206 ~~~C~vC~~~~~~~~lLlCD~Cd~~yH~~CL~PPL~~i-------P~g~W~Cp~C~~~~~ 258 (347)
..+| +|++..+...||.||.|+..||..|++ |... ....|+|+.|.....
T Consensus 16 ~~~C-~C~~~~~~~~MI~Cd~C~~WfH~~Cvg--l~~~~~~~l~~~~~~~~C~~C~~~~~ 72 (76)
T 1wem_A 16 ALYC-ICRQPHNNRFMICCDRCEEWFHGDCVG--ISEARGRLLERNGEDYICPNCTILSG 72 (76)
T ss_dssp CCCS-TTCCCCCSSCEEECSSSCCEEEHHHHS--CCHHHHHHHHHHTCCCCCHHHHHHSC
T ss_pred CCEE-ECCCccCCCCEEEeCCCCCcEeCeEEc--cchhhhhhccCCCCeEECcCCcCccC
Confidence 3578 899988777999999999999999999 4332 247899999986553
No 46
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=97.89 E-value=3.1e-06 Score=65.94 Aligned_cols=50 Identities=30% Similarity=0.632 Sum_probs=39.9
Q ss_pred ccccccccccCC-CCCeEEeccCCCCCCCcccCCCCCCCC---CCCccCccccCCCC
Q 019007 206 IQSCKLCGKADN-TSTMLLCDYCDEAFHPSCCNPRIKILP---TDNWLCQCCSNLNS 258 (347)
Q Consensus 206 ~~~C~vC~~~~~-~~~lLlCD~Cd~~yH~~CL~PPL~~iP---~g~W~Cp~C~~~~~ 258 (347)
..+| +|++..+ ...||.||.|+..||..|+. |...+ .+.|+|+.|.....
T Consensus 12 ~~~C-~C~~~~d~~~~MIqCd~C~~WfH~~Cvg--l~~~~~~~~~~~~C~~C~~~~~ 65 (79)
T 1wep_A 12 PVYC-LCRQPYNVNHFMIECGLCQDWFHGSCVG--IEEENAVDIDIYHCPDCEAVFG 65 (79)
T ss_dssp CCCS-TTSCSCCSSSCEEEBTTTCCEEEHHHHT--CCHHHHTTCSBBCCTTTTTTSC
T ss_pred ccEE-EcCCccCCCCceEEcCCCCCcEEeeecC--cccccccCCCeEECCCcccccC
Confidence 3567 8998764 67899999999999999999 43322 36899999987764
No 47
>3o7a_A PHD finger protein 13 variant; PHF13, zinc finger, PHD domain, nuclear protein, structural structural genomics consortium, SGC, protein binding; HET: M3L; 1.67A {Homo sapiens}
Probab=97.88 E-value=3.5e-06 Score=60.83 Aligned_cols=44 Identities=30% Similarity=0.668 Sum_probs=36.5
Q ss_pred cccccCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCccCccccC
Q 019007 211 LCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSN 255 (347)
Q Consensus 211 vC~~~~~~~~lLlCD~Cd~~yH~~CL~PPL~~iP~g~W~Cp~C~~ 255 (347)
+|++..+...|+.||.|+..||..|++.....+| +.|+|+.|..
T Consensus 8 ~C~~~~~~~~MI~Cd~C~~W~H~~Cvgi~~~~~~-~~~~C~~C~~ 51 (52)
T 3o7a_A 8 FCMKPFAGRPMIECNECHTWIHLSCAKIRKSNVP-EVFVCQKCRD 51 (52)
T ss_dssp TTCCBCTTCCEEECTTTCCEEETTTTTCCGGGCC-SSCCCHHHHT
T ss_pred EeCCcCCCCCEEEcCCCCccccccccCCCcccCC-CcEECcCCCC
Confidence 6888777779999999999999999996544444 6899999964
No 48
>2rsd_A E3 SUMO-protein ligase SIZ1; E3 SUMO ligase, plant homeodomain (PHD), histone binding; NMR {Oryza sativa japonica group}
Probab=97.88 E-value=3.3e-06 Score=64.14 Aligned_cols=48 Identities=23% Similarity=0.554 Sum_probs=37.4
Q ss_pred cccccccccCCCCCeEEecc--CCCCCCCcccCCCCCCCCC------CCccCccccCCC
Q 019007 207 QSCKLCGKADNTSTMLLCDY--CDEAFHPSCCNPRIKILPT------DNWLCQCCSNLN 257 (347)
Q Consensus 207 ~~C~vC~~~~~~~~lLlCD~--Cd~~yH~~CL~PPL~~iP~------g~W~Cp~C~~~~ 257 (347)
..| +|+...+.+.|+.||. |...||..|++ |...|. ..|+|+.|+..+
T Consensus 11 v~C-~C~~~~~~g~mI~CD~~~C~~W~H~~Cvg--i~~~~~~~~~~p~~~~C~~Cr~~r 66 (68)
T 2rsd_A 11 VRC-ICSSTMVNDSMIQCEDQRCQVWQHLNCVL--IPDKPGESAEVPPVFYCELCRLSR 66 (68)
T ss_dssp ECC-TTCCCSCCSCEEECSCTTTCEEEETTTSC--CCSSTTSCCCCCSSCCCHHHHHHH
T ss_pred EEe-ECCCCcCCCCEEEECCCCCCCeEchhhCC--CCcccccccCCCCcEECcCccCcc
Confidence 457 7988877889999995 99999999998 333222 369999997543
No 49
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A*
Probab=97.81 E-value=1.5e-06 Score=76.05 Aligned_cols=51 Identities=20% Similarity=0.555 Sum_probs=40.2
Q ss_pred ccccccccccCC-CCCeEEeccCCCCCCCcccCCCCCC-CCCCCccCccccCCC
Q 019007 206 IQSCKLCGKADN-TSTMLLCDYCDEAFHPSCCNPRIKI-LPTDNWLCQCCSNLN 257 (347)
Q Consensus 206 ~~~C~vC~~~~~-~~~lLlCD~Cd~~yH~~CL~PPL~~-iP~g~W~Cp~C~~~~ 257 (347)
..+| +|++..+ .+.|+.||.|+..||..|++..... ...+.|+|+.|....
T Consensus 8 ~~~C-~C~~~~~~~~~mi~Cd~C~~WfH~~Cv~~~~~~~~~~~~~~C~~C~~~~ 60 (174)
T 2ri7_A 8 KLYC-ICKTPEDESKFYIGCDRCQNWYHGRCVGILQSEAELIDEYVCPQCQSTE 60 (174)
T ss_dssp CEET-TTTEECCTTSCEEECTTTCCEEEHHHHTCCHHHHTTCSSCCCHHHHHHH
T ss_pred CcEe-eCCCCCCCCCCEeECCCCCchhChhhcCCchhhccCccCeecCCCcchh
Confidence 4689 9999754 5679999999999999999843222 236789999998654
No 50
>2kgg_A Histone demethylase jarid1A; PHD finger, histone modification, leukemia, alternative splicing, chromatin regulator, developmental protein; NMR {Homo sapiens} PDB: 2kgi_A* 3gl6_A*
Probab=97.66 E-value=5.4e-06 Score=59.91 Aligned_cols=45 Identities=24% Similarity=0.665 Sum_probs=35.8
Q ss_pred ccccccccCC-CCCeEEec-cCCCCCCCcccCCCCCCCC--CCCccCcccc
Q 019007 208 SCKLCGKADN-TSTMLLCD-YCDEAFHPSCCNPRIKILP--TDNWLCQCCS 254 (347)
Q Consensus 208 ~C~vC~~~~~-~~~lLlCD-~Cd~~yH~~CL~PPL~~iP--~g~W~Cp~C~ 254 (347)
.|.+|++..+ ...|+.|| .|+..||..|++ |...+ .+.|+|+.|.
T Consensus 4 ~cc~C~~p~~~~~~mI~Cd~~C~~WfH~~Cvg--l~~~~~~~~~~~C~~C~ 52 (52)
T 2kgg_A 4 AAQNCQRPCKDKVDWVQCDGGCDEWFHQVCVG--VSPEMAENEDYICINCA 52 (52)
T ss_dssp SCTTCCCCCCTTCCEEECTTTTCCEEETTTTT--CCHHHHHHSCCCCSCC-
T ss_pred cCCCCcCccCCCCcEEEeCCCCCccCcccccC--CCccccCCCCEECCCCC
Confidence 5778888764 56899999 899999999999 44332 3789999984
No 51
>3kqi_A GRC5, PHD finger protein 2; metal-binding, zinc-finger, histone-binding, NUC protein; HET: M3L; 1.78A {Homo sapiens} SCOP: g.50.1.2
Probab=97.44 E-value=1.4e-05 Score=61.70 Aligned_cols=52 Identities=29% Similarity=0.648 Sum_probs=38.7
Q ss_pred cccccccccCC-CCCeEEeccCCCCCCCcccCCCCCCCCC-CCccCccccCCCCC
Q 019007 207 QSCKLCGKADN-TSTMLLCDYCDEAFHPSCCNPRIKILPT-DNWLCQCCSNLNSN 259 (347)
Q Consensus 207 ~~C~vC~~~~~-~~~lLlCD~Cd~~yH~~CL~PPL~~iP~-g~W~Cp~C~~~~~~ 259 (347)
.+| +|++..+ ...||.||.|+..||..|++-.....+. +.|+|+.|....+.
T Consensus 11 ~yC-iC~~~~~~~~~MI~Cd~C~~WfH~~Cvg~~~~~~~~~~~~~C~~C~~~~~~ 64 (75)
T 3kqi_A 11 VYC-VCRLPYDVTRFMIECDACKDWFHGSCVGVEEEEAPDIDIYHCPNCEKTHGK 64 (75)
T ss_dssp EET-TTTEECCTTSCEEECTTTCCEEEHHHHTCCTTTGGGBSSCCCHHHHHHHCC
T ss_pred eEE-ECCCcCCCCCCEEEcCCCCCCEecccccccccccCCCCEEECCCCcccCCC
Confidence 345 7887654 5689999999999999999943333332 57999999876533
No 52
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=97.33 E-value=3.5e-05 Score=61.68 Aligned_cols=51 Identities=22% Similarity=0.630 Sum_probs=41.1
Q ss_pred cccccccccccCCCCCeEEeccCCCCCCCcccCCC------------CCCCCCCCccCccccCC
Q 019007 205 VIQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPR------------IKILPTDNWLCQCCSNL 256 (347)
Q Consensus 205 ~~~~C~vC~~~~~~~~lLlCD~Cd~~yH~~CL~PP------------L~~iP~g~W~Cp~C~~~ 256 (347)
.+..|.||..... +.++-|..|.+.||..||.++ +...+...|.|+.|..-
T Consensus 14 ~D~~C~VC~~~t~-~~l~pCRvC~RvfH~~CL~r~gy~~~~~a~e~~l~A~T~~GWSC~~CenL 76 (89)
T 1wil_A 14 NDEMCDVCEVWTA-ESLFPCRVCTRVFHDGCLRRMGYIQGDSAAEVTEMAHTETGWSCHYCDNI 76 (89)
T ss_dssp CSCCCTTTCCCCS-SCCSSCSSSSSCCCHHHHHHHTSCCCCCCCSCSCCCSSSSSCCCTTTCCC
T ss_pred CCcccCccccccc-cceeccccccccccHhhcccccccccHHHHHHHHccCCCCCccccccchh
Confidence 3578999986553 458889999999999999986 45557789999999543
No 53
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A
Probab=97.16 E-value=9.4e-05 Score=66.53 Aligned_cols=53 Identities=28% Similarity=0.626 Sum_probs=40.0
Q ss_pred cccccccccCCCC----CeEEeccCCCCCCCcccCCCCC------CCCC-CCccCccccCCCCC
Q 019007 207 QSCKLCGKADNTS----TMLLCDYCDEAFHPSCCNPRIK------ILPT-DNWLCQCCSNLNSN 259 (347)
Q Consensus 207 ~~C~vC~~~~~~~----~lLlCD~Cd~~yH~~CL~PPL~------~iP~-g~W~Cp~C~~~~~~ 259 (347)
.+|.+|++.-+++ .|+.||.|+..||..|.+..-. .+|. ..|+|+.|....+.
T Consensus 3 ~~CpiC~k~Y~~~~~~~~MIqCd~C~~W~H~~Cvgi~~~~~e~~~~~pe~~~y~Cp~C~~~~~~ 66 (183)
T 3lqh_A 3 NFCPLCDKCYDDDDYESKMMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCTERHPA 66 (183)
T ss_dssp CBCTTTCCBCTTCCTTCCEEECTTTCCEEEGGGSSCCHHHHHHHHHSHHHHCCCCTTTCCSSSC
T ss_pred CcCCCCcCccCCcccCCCeEECCCCCcccchhccccCHHHHHHhhcCCCCCeeECcCCCCCCCH
Confidence 4799998875544 4999999999999999994210 1233 37999999987754
No 54
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=96.84 E-value=0.00012 Score=74.71 Aligned_cols=51 Identities=27% Similarity=0.673 Sum_probs=40.0
Q ss_pred ccccccccccCC-CCCeEEeccCCCCCCCcccCCCCCCCCC---CCccCccccCCCCC
Q 019007 206 IQSCKLCGKADN-TSTMLLCDYCDEAFHPSCCNPRIKILPT---DNWLCQCCSNLNSN 259 (347)
Q Consensus 206 ~~~C~vC~~~~~-~~~lLlCD~Cd~~yH~~CL~PPL~~iP~---g~W~Cp~C~~~~~~ 259 (347)
..+| +|++..+ ...|+.||.|+..||..|++ +...+. +.|+|+.|....+.
T Consensus 37 ~~yC-~C~~~~d~~~~MIqCd~C~~WfH~~Cvg--l~~~~~~~~~~~~C~~C~~~~~~ 91 (488)
T 3kv5_D 37 PVYC-VCRQPYDVNRFMIECDICKDWFHGSCVG--VEEHHAVDIDLYHCPNCAVLHGS 91 (488)
T ss_dssp CEET-TTTEECCTTSCEEEBTTTCCEEEHHHHT--CCGGGGGGEEEBCCHHHHHHHCS
T ss_pred CeEE-eCCCcCCCCCCeEEccCCCCceeeeecC--cCcccccCCCEEECCCCcCCcCc
Confidence 3566 8988754 67899999999999999999 554442 57999999876544
No 55
>4bbq_A Lysine-specific demethylase 2A; oxidoreductase, ubiquitin, ligase, ubiquitination, demethyla ZF-CXXC DNA binding domain, CPG island, chromatin; 2.24A {Homo sapiens}
Probab=96.80 E-value=0.00042 Score=56.86 Aligned_cols=49 Identities=20% Similarity=0.476 Sum_probs=34.4
Q ss_pred cccccccC-CCCCeEEeccCCCCCCCcccCCCCCCCCCC----CccCccccCCC
Q 019007 209 CKLCGKAD-NTSTMLLCDYCDEAFHPSCCNPRIKILPTD----NWLCQCCSNLN 257 (347)
Q Consensus 209 C~vC~~~~-~~~~lLlCD~Cd~~yH~~CL~PPL~~iP~g----~W~Cp~C~~~~ 257 (347)
|..|.... .+..|+.|+.|+.+||..|+.++...++.+ .|+|+.|....
T Consensus 62 c~~c~~~~~~~~~m~~C~~C~~~~H~~C~~~~~~~~~~~~~~~~~~C~~C~~~~ 115 (117)
T 4bbq_A 62 VDQNEETQDFEKKLMECCICNEIVHPGCLQMDGEGLLNEELPNCWECPKCYQED 115 (117)
T ss_dssp BCCHHHHCCGGGSCEEETTTCCEECGGGCCSCCCCEECSSSSSEEECTTTC---
T ss_pred ccccccccccCcceEEeeecCCeEECCCCCCCccccccccCCCCeECCCCcCCC
Confidence 44443332 345799999999999999999886655443 49999998654
No 56
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=96.59 E-value=0.00061 Score=70.06 Aligned_cols=41 Identities=20% Similarity=0.536 Sum_probs=31.9
Q ss_pred CCCCeEEeccCCCCCCCcccCCCCCCC---CCCCccCccccCCCCC
Q 019007 217 NTSTMLLCDYCDEAFHPSCCNPRIKIL---PTDNWLCQCCSNLNSN 259 (347)
Q Consensus 217 ~~~~lLlCD~Cd~~yH~~CL~PPL~~i---P~g~W~Cp~C~~~~~~ 259 (347)
+...|+.||.|+..||..|++ +..- ..+.|+||.|....+.
T Consensus 54 ~~~~mI~CD~C~~WfH~~CVg--i~~~~a~~~~~y~Cp~C~~~~gp 97 (528)
T 3pur_A 54 NDFQWIGCDSCQTWYHFLCSG--LEQFEYYLYEKFFCPKCVPHTGH 97 (528)
T ss_dssp STTSEEECTTTCCEEEGGGTT--CCGGGTTTEEECCCTTTHHHHCS
T ss_pred cCCCEEECCCCCcCCCCcCCC--CChhHhcCCCeEECcCCcCCCCC
Confidence 445899999999999999999 4432 2367999999875433
No 57
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=96.25 E-value=0.0026 Score=52.64 Aligned_cols=48 Identities=17% Similarity=0.385 Sum_probs=43.0
Q ss_pred ccCCccccccccccccccccCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCccC
Q 019007 196 VSGTGHEISVIQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLC 250 (347)
Q Consensus 196 ~~~~~~~~~~~~~C~vC~~~~~~~~lLlCD~Cd~~yH~~CL~PPL~~iP~g~W~C 250 (347)
...|.|..+ .|.+|++... +.|..|+.+||..|+.+.|...+.+.|+|
T Consensus 51 ~g~W~Cp~c---~C~~C~k~~~----~~C~~Cp~sfC~~c~~g~l~~~~~~~~~c 98 (107)
T 4gne_A 51 YGKWECPWH---QCDECSSAAV----SFCEFCPHSFCKDHEKGALVPSALEGRLC 98 (107)
T ss_dssp SSCCCCGGG---BCTTTCSBCC----EECSSSSCEECTTTCTTSCEECTTTTCEE
T ss_pred CCCEECCCC---CCCcCCCCCC----cCcCCCCcchhhhccCCcceecCCCCcee
Confidence 456988877 7999998763 88999999999999999999999999998
No 58
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=95.71 E-value=0.00082 Score=67.88 Aligned_cols=49 Identities=31% Similarity=0.622 Sum_probs=37.8
Q ss_pred cccccccCC-CCCeEEeccCCCCCCCcccCCCCCCCC---CCCccCccccCCCCC
Q 019007 209 CKLCGKADN-TSTMLLCDYCDEAFHPSCCNPRIKILP---TDNWLCQCCSNLNSN 259 (347)
Q Consensus 209 C~vC~~~~~-~~~lLlCD~Cd~~yH~~CL~PPL~~iP---~g~W~Cp~C~~~~~~ 259 (347)
.-+|++..+ .+.|+.||.|+..||..|++ +...+ .+.|+|+.|......
T Consensus 7 yCiC~~~~d~~~~MIqCD~C~~WfH~~CVg--i~~~~~~~~~~y~C~~C~~~~~~ 59 (447)
T 3kv4_A 7 YCLCRLPYDVTRFMIECDMCQDWFHGSCVG--VEEEKAADIDLYHCPNCEVLHGP 59 (447)
T ss_dssp ETTTTEECCTTSCEEECTTTCCEEEHHHHT--CCHHHHTTEEECCCHHHHHHHCC
T ss_pred EEeCCCcCCCCCCeEEcCCCCcccccccCC--cCcccccCCCEEECCCCccccCC
Confidence 337887644 67899999999999999999 44432 267999999876543
No 59
>2ku7_A MLL1 PHD3-CYP33 RRM chimeric protein; transcriptional regulation, RRM domain, transcr; NMR {Homo sapiens}
Probab=91.88 E-value=0.029 Score=45.51 Aligned_cols=38 Identities=29% Similarity=0.686 Sum_probs=29.4
Q ss_pred CeEEeccCCCCCCCcccCCC------CCCCCC-CCccCccccCCC
Q 019007 220 TMLLCDYCDEAFHPSCCNPR------IKILPT-DNWLCQCCSNLN 257 (347)
Q Consensus 220 ~lLlCD~Cd~~yH~~CL~PP------L~~iP~-g~W~Cp~C~~~~ 257 (347)
.|+.||.|+.+||..|..-. |..+|. -.|.|+.|....
T Consensus 1 ~mi~c~~c~~w~H~~c~~~~~~~~~~l~~lp~~~~~~c~~C~~~~ 45 (140)
T 2ku7_A 1 SMMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCTERH 45 (140)
T ss_dssp CCCCCSCCSSCHHHHHCCCCHHHHHHHHSSCTTTTCCSSCCTTTS
T ss_pred CccccccCCCccCCcccccCHHHHHHHhhccccceeeCccccccc
Confidence 38899999999999999832 134564 369999998654
No 60
>3rsn_A SET1/ASH2 histone methyltransferase complex subun; PHD domain, winged helix domain, binding, transcription; 2.10A {Homo sapiens} PDB: 3s32_A
Probab=88.40 E-value=0.37 Score=43.15 Aligned_cols=48 Identities=15% Similarity=0.301 Sum_probs=32.3
Q ss_pred ccccC-CCCCeEEeccCCCCCCCcccCCCCCCC-CC---CCccCccccCCCCC
Q 019007 212 CGKAD-NTSTMLLCDYCDEAFHPSCCNPRIKIL-PT---DNWLCQCCSNLNSN 259 (347)
Q Consensus 212 C~~~~-~~~~lLlCD~Cd~~yH~~CL~PPL~~i-P~---g~W~Cp~C~~~~~~ 259 (347)
||..+ -...+|.|+.|.+.||..|+..+...+ |- ....|..|.....+
T Consensus 10 CG~~~~~~~~mLqC~~C~qWFH~~Cl~~~~~~~lp~~~fY~F~C~~C~~~g~E 62 (177)
T 3rsn_A 10 EENGRQLGEVELQCGICTKWFTADTFGIDTSSCLPFMTNYSFHCNVCHHSGNT 62 (177)
T ss_dssp -CTTCCTTSCEEECTTTCCEEEGGGGTCCCTTCCTTCCSEEEECTTTSTTSSC
T ss_pred cCCCCCCCceeEeeccccceecHHHhcccccCccccceeEEEEccccCCCCcc
Confidence 55433 335899999999999999998554333 31 23568888765533
No 61
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=88.39 E-value=0.025 Score=45.55 Aligned_cols=104 Identities=15% Similarity=0.221 Sum_probs=67.1
Q ss_pred CCCCCCCccccccCC---------CCCcchhhHHHHhhcCcccccccccccccccccccC-CccccccccccccccccCC
Q 019007 148 DISNSDISRLEVLDE---------DPSAREFCVSVLRSNGLLGAVGECSVRSVASGEVSG-TGHEISVIQSCKLCGKADN 217 (347)
Q Consensus 148 d~~eC~~s~~~~~~e---------e~S~~~~Cl~~l~~~~l~~~~~~Cp~~~~t~~~~~~-~~~~~~~~~~C~vC~~~~~ 217 (347)
+..+|++|.-.+... -...|.||..++.+|-. ....||+-+........ ......+...|.+|...-.
T Consensus 6 ~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~--~~~~CP~Cr~~~~~~~l~~l~i~~~~~~C~iC~~~~~ 83 (133)
T 4ap4_A 6 GTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLK--NANTCPTCRKKINHKRYHPIYIGSGTVSCPICMDGYS 83 (133)
T ss_dssp CSCBCTTTCCBHHHHHHTTCCEEEETTCCEEEHHHHHHHHT--TCSBCTTTCCBCTTTCEEECBCSSSSCBCTTTCCBHH
T ss_pred CCCCCcccChhhhCccccccCeEecCCCChhhHHHHHHHHH--hCCCCCCCCCcCccccccccccCCCCCCCCCCCCccc
Confidence 456899998765321 24789999999987732 23689887765432221 1112234577999986431
Q ss_pred ----CCCeEEeccCCCCCCCcccCCCCCCCCCCCccCccccCCC
Q 019007 218 ----TSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNLN 257 (347)
Q Consensus 218 ----~~~lLlCD~Cd~~yH~~CL~PPL~~iP~g~W~Cp~C~~~~ 257 (347)
.......-.|+-.||..|+..-+... ..||.|+..-
T Consensus 84 ~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~----~~CP~Cr~~~ 123 (133)
T 4ap4_A 84 EIVQNGRLIVSTECGHVFCSQCLRDSLKNA----NTCPTCRKKI 123 (133)
T ss_dssp HHHHTTCCEEEETTSBEEEHHHHHHHHHHC----SBCTTTCCBC
T ss_pred cccccCcceEeCCCCChhhHHHHHHHHHcC----CCCCCCCCcC
Confidence 12344566899999999998765432 4899998764
No 62
>4bbq_A Lysine-specific demethylase 2A; oxidoreductase, ubiquitin, ligase, ubiquitination, demethyla ZF-CXXC DNA binding domain, CPG island, chromatin; 2.24A {Homo sapiens}
Probab=85.02 E-value=0.13 Score=41.84 Aligned_cols=37 Identities=19% Similarity=0.407 Sum_probs=29.6
Q ss_pred cccccccccCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCccCccccCCC
Q 019007 207 QSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNLN 257 (347)
Q Consensus 207 ~~C~vC~~~~~~~~lLlCD~Cd~~yH~~CL~PPL~~iP~g~W~Cp~C~~~~ 257 (347)
.+|++|++.+ |+.|+..||+.|++++ .|.|..|....
T Consensus 8 ~~C~~C~~~~-------C~~C~~c~~~~~~~~~-------~~~~~~c~~~~ 44 (117)
T 4bbq_A 8 RKCKACVQGE-------CGVCHYCRDMKKFGGP-------GRMKQSCVLRQ 44 (117)
T ss_dssp SCSHHHHSCC-------CSCSHHHHHSGGGTSC-------CCSCCCCGGGC
T ss_pred CcCcCcCCcC-------CCCCCCCcCCcccCCC-------Cccccchhhee
Confidence 6788998763 9999999999999876 37777776543
No 63
>2pv0_B DNA (cytosine-5)-methyltransferase 3-like; DNMT3L, unmethylated H3K4, de novo DNA methylation, transferase regulator; HET: DNA; 3.30A {Homo sapiens} PDB: 2pvc_B*
Probab=84.84 E-value=0.089 Score=52.25 Aligned_cols=50 Identities=22% Similarity=0.677 Sum_probs=39.2
Q ss_pred cccccccccccCCCCCeEEec--cCCCCCCCcccCCCCC-----C-CCCCCccCccccCCC
Q 019007 205 VIQSCKLCGKADNTSTMLLCD--YCDEAFHPSCCNPRIK-----I-LPTDNWLCQCCSNLN 257 (347)
Q Consensus 205 ~~~~C~vC~~~~~~~~lLlCD--~Cd~~yH~~CL~PPL~-----~-iP~g~W~Cp~C~~~~ 257 (347)
.+.+|..|+.++ .+++|| .|.+.|=..|+.--+- . .....|.|--|....
T Consensus 92 ~~~yCr~C~~Gg---~l~~Cdn~~C~r~FC~~Ci~~n~g~~~~~~i~~~d~W~Cf~C~p~p 149 (386)
T 2pv0_B 92 YQSYCSICCSGE---TLLICGNPDCTRCYCFECVDSLVGPGTSGKVHAMSNWVCYLCLPSS 149 (386)
T ss_dssp SBCSCTTTCCCS---SCEECCSTTCCCEECHHHHHHHTCTTHHHHHHHCSSCCCTTTSSCC
T ss_pred CcccceEcCCCC---eEEEeCCCCCCcchHHHHHHHhcChhHHHHhhccCCceEEEcCCcc
Confidence 357999999987 699999 9999999999873331 1 133679999998775
No 64
>3a1b_A DNA (cytosine-5)-methyltransferase 3A, histone H3; zinc-finger, histone binding, chromosomal protein, DNA damag repair, DNA-binding, methylation; HET: DNA; 2.29A {Homo sapiens} PDB: 3a1a_A*
Probab=81.51 E-value=0.26 Score=43.48 Aligned_cols=50 Identities=22% Similarity=0.653 Sum_probs=39.4
Q ss_pred cccccccccccCCCCCeEEec--cCCCCCCCcccCCCCC-----C-CCCCCccCccccCCC
Q 019007 205 VIQSCKLCGKADNTSTMLLCD--YCDEAFHPSCCNPRIK-----I-LPTDNWLCQCCSNLN 257 (347)
Q Consensus 205 ~~~~C~vC~~~~~~~~lLlCD--~Cd~~yH~~CL~PPL~-----~-iP~g~W~Cp~C~~~~ 257 (347)
-+.+|.+|+.++ .+++|| .|.+.|=..|+.--+. + +....|.|--|....
T Consensus 78 ~~~yC~wC~~Gg---~l~~Cdn~~C~r~FC~~CI~~nvG~~~~~~i~~~d~W~Cy~C~P~~ 135 (159)
T 3a1b_A 78 YQSYCTICCGGR---EVLMCGNNNCCRCFCVECVDLLVGPGAAQAAIKEDPWNCYMCGHKG 135 (159)
T ss_dssp SBSSCTTTSCCS---EEEECSSTTTCCEEEHHHHHHHTCTTHHHHHHTSSSCCCTTTCSSC
T ss_pred CcceeeEecCCC---eEEeeCCCCCCCchhHHHHHHhcCHhHHHHHhccCCCEEEecCCcc
Confidence 357999999887 799999 8999999999863222 2 355789999998765
No 65
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=71.91 E-value=1.7 Score=29.66 Aligned_cols=47 Identities=17% Similarity=0.390 Sum_probs=32.3
Q ss_pred ccccccccccCCC-CCeEEeccCCCCCCCcccCCCCCCCCCCCccCccccCC
Q 019007 206 IQSCKLCGKADNT-STMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNL 256 (347)
Q Consensus 206 ~~~C~vC~~~~~~-~~lLlCD~Cd~~yH~~CL~PPL~~iP~g~W~Cp~C~~~ 256 (347)
...|.+|...-.. +.......|.-.||..|+..-+.. ...||.|+..
T Consensus 5 ~~~C~IC~~~~~~~~~~~~~~~C~H~f~~~Ci~~w~~~----~~~CP~Cr~~ 52 (55)
T 1iym_A 5 GVECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGS----HSTCPLCRLT 52 (55)
T ss_dssp SCCCTTTCCCCCTTSCCEECSSSCCEECTTHHHHTTTT----CCSCSSSCCC
T ss_pred CCcCccCCccccCCCceEECCCCCCcccHHHHHHHHHc----CCcCcCCCCE
Confidence 4679999875432 334444569999999999865543 3479999754
No 66
>1vyx_A ORF K3, K3RING; zinc-binding protein, ring domain, cross-brace motif; NMR {Human herpesvirus 8} SCOP: g.44.1.3
Probab=70.26 E-value=0.32 Score=35.59 Aligned_cols=51 Identities=24% Similarity=0.452 Sum_probs=33.3
Q ss_pred cccccccccccCCCCCeEEe--ccCCCCCCCcccCCCCCCCCCCCccCccccCCC
Q 019007 205 VIQSCKLCGKADNTSTMLLC--DYCDEAFHPSCCNPRIKILPTDNWLCQCCSNLN 257 (347)
Q Consensus 205 ~~~~C~vC~~~~~~~~lLlC--D~Cd~~yH~~CL~PPL~~iP~g~W~Cp~C~~~~ 257 (347)
+...|.+|....++..++-| .+.-+.||..||..=+.. .+.+.|+.|....
T Consensus 5 ~~~~CrIC~~~~~~~l~~PC~C~gs~~~~H~~Cl~~W~~~--~~~~~C~~C~~~~ 57 (60)
T 1vyx_A 5 DVPVCWICNEELGNERFRACGCTGELENVHRSCLSTWLTI--SRNTACQICGVVY 57 (60)
T ss_dssp SCCEETTTTEECSCCCCCSCCCSSGGGSCCHHHHHHHHHH--HTCSBCTTTCCBC
T ss_pred CCCEeEEeecCCCCceecCcCCCCchhhhHHHHHHHHHHh--CCCCccCCCCCee
Confidence 35689999876554445554 233348999999854421 2467899887653
No 67
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=66.72 E-value=1.2 Score=32.01 Aligned_cols=50 Identities=18% Similarity=0.313 Sum_probs=33.0
Q ss_pred cccccccccccCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCccCccccCCCC
Q 019007 205 VIQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNLNS 258 (347)
Q Consensus 205 ~~~~C~vC~~~~~~~~lLlCD~Cd~~yH~~CL~PPL~~iP~g~W~Cp~C~~~~~ 258 (347)
....|.+|...-.....+..-.|.-.||..|+..-+.. ...||.|+..-.
T Consensus 13 ~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~----~~~CP~Cr~~~~ 62 (69)
T 2kiz_A 13 TEEKCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLIT----NKKCPICRVDIE 62 (69)
T ss_dssp CCCSBTTTTBCCCSSSCEEECTTSCEEEHHHHHHHHHH----CSBCTTTCSBSC
T ss_pred CCCCCeeCCccccCCCcEEEeCCCCHHHHHHHHHHHHc----CCCCcCcCcccc
Confidence 34689999765433333445569999999999754432 235999986643
No 68
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=65.46 E-value=2.8 Score=32.19 Aligned_cols=50 Identities=22% Similarity=0.488 Sum_probs=31.1
Q ss_pred ccccccccccCCC-CCeEE-e--ccCCCCCCCcccCCCCCCCCCCCccCccccCCC
Q 019007 206 IQSCKLCGKADNT-STMLL-C--DYCDEAFHPSCCNPRIKILPTDNWLCQCCSNLN 257 (347)
Q Consensus 206 ~~~C~vC~~~~~~-~~lLl-C--D~Cd~~yH~~CL~PPL~~iP~g~W~Cp~C~~~~ 257 (347)
...|.+|....++ +.++. | .+.-..||..|+..=|.. .+...||.|...-
T Consensus 15 ~~~C~IC~~~~~~~~~l~~pC~C~Gs~h~fH~~Cl~~Wl~~--~~~~~CplCr~~~ 68 (80)
T 2d8s_A 15 QDICRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKS--SDTRCCELCKYEF 68 (80)
T ss_dssp SCCCSSSCCCCCSSSCEECSSSCCSSSCCEETTHHHHHHHH--HCCSBCSSSCCBC
T ss_pred CCCCeEcCccccCCCeeEeccccCCcCCeeCHHHHHHHHhh--CCCCCCCCCCCee
Confidence 4689999865432 33332 2 222389999999854322 1335899998765
No 69
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=62.78 E-value=2.3 Score=32.10 Aligned_cols=33 Identities=21% Similarity=0.501 Sum_probs=23.6
Q ss_pred eEEeccCCCCCCCcccCCCCCCCCCCCccCccccCCC
Q 019007 221 MLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNLN 257 (347)
Q Consensus 221 lLlCD~Cd~~yH~~CL~PPL~~iP~g~W~Cp~C~~~~ 257 (347)
.+.--.|.-.||..|+..=|..-. .||.|+..-
T Consensus 42 ~~~~~~C~H~FH~~Ci~~Wl~~~~----~CP~CR~~~ 74 (81)
T 2ecl_A 42 VVVWGECNHSFHNCCMSLWVKQNN----RCPLCQQDW 74 (81)
T ss_dssp CEEEETTSCEEEHHHHHHHTTTCC----BCTTTCCBC
T ss_pred EEEeCCCCCccChHHHHHHHHhCC----CCCCcCCCc
Confidence 333347999999999987655432 799998653
No 70
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=62.71 E-value=3.7 Score=30.08 Aligned_cols=50 Identities=20% Similarity=0.395 Sum_probs=32.9
Q ss_pred cccccccccccCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCccCccccCCCC
Q 019007 205 VIQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNLNS 258 (347)
Q Consensus 205 ~~~~C~vC~~~~~~~~lLlCD~Cd~~yH~~CL~PPL~~iP~g~W~Cp~C~~~~~ 258 (347)
....|.+|...-.....+.--.|.-.||..|+..-+.. ...||.|+..-.
T Consensus 14 ~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~----~~~CP~Cr~~~~ 63 (78)
T 2ect_A 14 SGLECPVCKEDYALGESVRQLPCNHLFHDSCIVPWLEQ----HDSCPVCRKSLT 63 (78)
T ss_dssp SSCCCTTTTSCCCTTSCEEECTTSCEEETTTTHHHHTT----TCSCTTTCCCCC
T ss_pred CCCCCeeCCccccCCCCEEEeCCCCeecHHHHHHHHHc----CCcCcCcCCccC
Confidence 34689999875433333333358889999999855432 247999987653
No 71
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=61.56 E-value=2.3 Score=32.49 Aligned_cols=47 Identities=17% Similarity=0.457 Sum_probs=34.1
Q ss_pred ccccccccccCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCccCccccCC
Q 019007 206 IQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNL 256 (347)
Q Consensus 206 ~~~C~vC~~~~~~~~lLlCD~Cd~~yH~~CL~PPL~~iP~g~W~Cp~C~~~ 256 (347)
...|.+|...-.. -+.|..|...||..|+.-=|.... .=.||.|...
T Consensus 15 i~~C~IC~~~i~~--g~~C~~C~h~fH~~Ci~kWl~~~~--~~~CP~Cr~~ 61 (74)
T 2ct0_A 15 VKICNICHSLLIQ--GQSCETCGIRMHLPCVAKYFQSNA--EPRCPHCNDY 61 (74)
T ss_dssp SCBCSSSCCBCSS--SEECSSSCCEECHHHHHHHSTTCS--SCCCTTTCSC
T ss_pred CCcCcchhhHccc--CCccCCCCchhhHHHHHHHHHhcC--CCCCCCCcCc
Confidence 4679999876543 357889999999999986554432 2368888754
No 72
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=61.30 E-value=0.72 Score=33.93 Aligned_cols=49 Identities=22% Similarity=0.470 Sum_probs=33.7
Q ss_pred cccccccccccCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCccCccccCCC
Q 019007 205 VIQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNLN 257 (347)
Q Consensus 205 ~~~~C~vC~~~~~~~~lLlCD~Cd~~yH~~CL~PPL~~iP~g~W~Cp~C~~~~ 257 (347)
+...|.+|...-.....+..-.|.-.||..|+..-+.. ...||.|+..-
T Consensus 22 ~~~~C~IC~~~~~~~~~~~~l~C~H~fh~~Ci~~w~~~----~~~CP~Cr~~~ 70 (75)
T 1x4j_A 22 EQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKA----NRTCPICRADS 70 (75)
T ss_dssp SCCEETTTTEECCBTCEEEEETTTEEEETTHHHHHHHH----CSSCTTTCCCC
T ss_pred CCCCCeECCcccCCCCeEEEECCCCHhHHHHHHHHHHc----CCcCcCcCCcC
Confidence 34689999976544444445569999999999864432 24799997654
No 73
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=56.88 E-value=1.6 Score=33.56 Aligned_cols=49 Identities=16% Similarity=0.356 Sum_probs=32.7
Q ss_pred cccccccccccCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCccCccccCCC
Q 019007 205 VIQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNLN 257 (347)
Q Consensus 205 ~~~~C~vC~~~~~~~~lLlCD~Cd~~yH~~CL~PPL~~iP~g~W~Cp~C~~~~ 257 (347)
.+..|.+|...-..+..+..-.|.-.||..|+..-+.. .-.||.|+..-
T Consensus 39 ~~~~C~IC~~~~~~~~~~~~l~C~H~Fh~~Ci~~wl~~----~~~CP~Cr~~~ 87 (91)
T 2l0b_A 39 QEMCCPICCSEYVKGDVATELPCHHYFHKPCVSIWLQK----SGTCPVCRCMF 87 (91)
T ss_dssp SCSEETTTTEECCTTCEEEEETTTEEEEHHHHHHHHTT----TCBCTTTCCBS
T ss_pred CCCCCcccChhhcCCCcEEecCCCChHHHHHHHHHHHc----CCcCcCcCccC
Confidence 34689999865433333434459999999999865432 23799998653
No 74
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=54.16 E-value=1.8 Score=29.49 Aligned_cols=47 Identities=19% Similarity=0.436 Sum_probs=32.0
Q ss_pred ccccccccccC-CCCCeEEeccCCCCCCCcccCCCCCCCCCCCccCccccCC
Q 019007 206 IQSCKLCGKAD-NTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNL 256 (347)
Q Consensus 206 ~~~C~vC~~~~-~~~~lLlCD~Cd~~yH~~CL~PPL~~iP~g~W~Cp~C~~~ 256 (347)
...|.+|...- +.+.....-.|.-.||..|+..-+..- ..||.|+..
T Consensus 5 ~~~C~IC~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~----~~CP~Cr~~ 52 (55)
T 2ecm_A 5 SSGCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKEG----YRCPLCSGP 52 (55)
T ss_dssp CCSCTTTCCCCCTTTSCEEECTTSCEEETTHHHHHHHHT----CCCTTSCCS
T ss_pred CCcCcccChhhcCCCcCeEecCCCCcccHHHHHHHHHcC----CcCCCCCCc
Confidence 46799998753 333455666799999999997543221 468888754
No 75
>1weq_A PHD finger protein 7; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=53.54 E-value=11 Score=29.78 Aligned_cols=34 Identities=24% Similarity=0.762 Sum_probs=27.2
Q ss_pred CCeEEeccCC-CCCCCcccCCCCCCCCCCCccCccccC
Q 019007 219 STMLLCDYCD-EAFHPSCCNPRIKILPTDNWLCQCCSN 255 (347)
Q Consensus 219 ~~lLlCD~Cd-~~yH~~CL~PPL~~iP~g~W~Cp~C~~ 255 (347)
-.||+|..|. .+-|..|.. |.. ....|.|..|..
T Consensus 44 W~L~lC~~Cgs~gtH~~Cs~--l~~-~~~~weC~~C~~ 78 (85)
T 1weq_A 44 WRLILCATCGSHGTHRDCSS--LRP-NSKKWECNECLP 78 (85)
T ss_dssp TBCEECSSSCCCEECSGGGT--CCT-TCSCCCCTTTSC
T ss_pred EEEEeCcccCCchhHHHHhC--CcC-CCCCEECCcCcc
Confidence 4799999997 567999999 432 456899999984
No 76
>2xag_B REST corepressor 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_B* 2xah_B* 2xaj_B* 2xaq_B* 2xas_B*
Probab=53.05 E-value=2.8 Score=42.67 Aligned_cols=19 Identities=42% Similarity=0.774 Sum_probs=0.0
Q ss_pred ccccccCCCceeecCCCCc
Q 019007 297 TSRVRIGESYQAEVPDWSD 315 (347)
Q Consensus 297 ts~vRiG~~fQa~VP~Wsg 315 (347)
...+|||..|||+||+|-.
T Consensus 99 ~~eIRVG~~YQAeIPe~~~ 117 (482)
T 2xag_B 99 GGGMRVGPQYQAVVPDFDP 117 (482)
T ss_dssp -------------------
T ss_pred CCCCCCCCccCccCCCccC
Confidence 4578999999999999983
No 77
>3k1l_B Fancl; UBC, ring, RWD, ligase; HET: MAL CIT; 3.20A {Drosophila melanogaster}
Probab=51.38 E-value=4.6 Score=39.94 Aligned_cols=53 Identities=21% Similarity=0.367 Sum_probs=33.6
Q ss_pred cccccccccccCCC-C--CeEEec--cCCCCCCCcccCCCCCCCCCC-------CccCccccCCC
Q 019007 205 VIQSCKLCGKADNT-S--TMLLCD--YCDEAFHPSCCNPRIKILPTD-------NWLCQCCSNLN 257 (347)
Q Consensus 205 ~~~~C~vC~~~~~~-~--~lLlCD--~Cd~~yH~~CL~PPL~~iP~g-------~W~Cp~C~~~~ 257 (347)
....|.+|-.-..+ + ....|+ .|...||..|+..=+...+.+ .=-||.|...-
T Consensus 307 ~~~ECaICys~~l~~g~lPdk~C~n~~C~h~FH~~CL~kWLrs~~~sRqSFnvi~G~CPyCr~pI 371 (381)
T 3k1l_B 307 EELRCNICFAYRLDGGEVPLVSCDNAKCVLKCHAVCLEEWFKTLMDGKTFLEVSFGQCPFCKAKL 371 (381)
T ss_dssp SCCSCSSSCCSSCTTCCCCCBCCSCTTCCCCBCSGGGHHHHHHHHSSSCTTTCCEEECTTTCCEE
T ss_pred CCccCcccceeecCCCCCccccccCCccCCccchHHHHHHHHhCCCccccccccCCCCCCCCCcC
Confidence 34679999865433 2 335698 899999999998533222211 01388887643
No 78
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=48.57 E-value=22 Score=25.23 Aligned_cols=35 Identities=11% Similarity=0.131 Sum_probs=24.3
Q ss_pred ccCCCCCCCCCccccccC--CCCCcchhhHHHHhhcC
Q 019007 144 TEGSDISNSDISRLEVLD--EDPSAREFCVSVLRSNG 178 (347)
Q Consensus 144 ~~~~d~~eC~~s~~~~~~--ee~S~~~~Cl~~l~~~~ 178 (347)
.+..+..+|++|...+.. .....|.||..++..+-
T Consensus 15 ~~~~~~~~C~IC~~~~~~~~~~~CgH~fC~~Ci~~~~ 51 (73)
T 2ysl_A 15 NKLQEEVICPICLDILQKPVTIDCGHNFCLKCITQIG 51 (73)
T ss_dssp CCCCCCCBCTTTCSBCSSEEECTTCCEEEHHHHHHHC
T ss_pred HhCccCCEeccCCcccCCeEEcCCCChhhHHHHHHHH
Confidence 345566789999876421 12578999999987763
No 79
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=48.03 E-value=2.9 Score=32.98 Aligned_cols=37 Identities=19% Similarity=0.283 Sum_probs=24.6
Q ss_pred EEeccCCCCCCCcccCCCCCCCC-CCCccCccccCCCC
Q 019007 222 LLCDYCDEAFHPSCCNPRIKILP-TDNWLCQCCSNLNS 258 (347)
Q Consensus 222 LlCD~Cd~~yH~~CL~PPL~~iP-~g~W~Cp~C~~~~~ 258 (347)
+.--.|.-.||..|+..-|..-. ...-.||.|+..-.
T Consensus 56 ~~~~~C~H~Fh~~Ci~~wl~~~~~~~~~~CP~CR~~~~ 93 (114)
T 1v87_A 56 GRLTKCSHAFHLLCLLAMYCNGNKDGSLQCPSCKTIYG 93 (114)
T ss_dssp EEESSSCCEECHHHHHHHHHHTCCSSCCBCTTTCCBSS
T ss_pred eecCCCCCcccHHHHHHHHHcccCCCCCcCCCCCCccC
Confidence 33567889999999986542111 23457999987654
No 80
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=47.38 E-value=13 Score=26.89 Aligned_cols=50 Identities=18% Similarity=0.298 Sum_probs=33.8
Q ss_pred ccccccccccCCCCCeEEeccCCCCCCCcccCCCCCCCC---CCCccCccccCCCC
Q 019007 206 IQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILP---TDNWLCQCCSNLNS 258 (347)
Q Consensus 206 ~~~C~vC~~~~~~~~lLlCD~Cd~~yH~~CL~PPL~~iP---~g~W~Cp~C~~~~~ 258 (347)
...|.+|...-..-.++ .|+-.||..|+.--+.... .+.-.||.|+..-.
T Consensus 12 ~~~C~IC~~~~~~p~~l---~CgH~fC~~Ci~~~~~~~~~~~~~~~~CP~Cr~~~~ 64 (79)
T 2egp_A 12 EVTCPICLELLTEPLSL---DCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISYS 64 (79)
T ss_dssp CCEETTTTEECSSCCCC---SSSCCCCHHHHSCCCCCCSSSCCCCCCCSSSCCCCC
T ss_pred CCCCcCCCcccCCeeEC---CCCCHHHHHHHHHHHHhcccCCCCCCcCCCCCCcCC
Confidence 46799998765433333 6888899999986554421 23568999987653
No 81
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=45.42 E-value=3 Score=30.24 Aligned_cols=50 Identities=20% Similarity=0.361 Sum_probs=32.4
Q ss_pred ccccccccccCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCccCccccCCCCC
Q 019007 206 IQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNLNSN 259 (347)
Q Consensus 206 ~~~C~vC~~~~~~~~lLlCD~Cd~~yH~~CL~PPL~~iP~g~W~Cp~C~~~~~~ 259 (347)
+..|.+|...-.....+.--.|.-.||..|+..-+..- -.||.|+..-..
T Consensus 15 ~~~C~IC~~~~~~~~~~~~~~C~H~f~~~Ci~~~~~~~----~~CP~Cr~~~~~ 64 (74)
T 2ep4_A 15 HELCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVR----KVCPLCNMPVLQ 64 (74)
T ss_dssp SCBCSSSCCBCCSSSCEEEETTTEEEEHHHHHHHHHHC----SBCTTTCCBCSS
T ss_pred CCCCcCCCcccCCCCcEEEcCCCCEecHHHHHHHHHcC----CcCCCcCccccc
Confidence 46899998764333333222588889999998544321 279999876543
No 82
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=44.42 E-value=18 Score=25.92 Aligned_cols=45 Identities=13% Similarity=0.066 Sum_probs=28.6
Q ss_pred cCCCCCCCCCccccccCCC-----CCcchhhHHHHhhcCccccccccccccc
Q 019007 145 EGSDISNSDISRLEVLDED-----PSAREFCVSVLRSNGLLGAVGECSVRSV 191 (347)
Q Consensus 145 ~~~d~~eC~~s~~~~~~ee-----~S~~~~Cl~~l~~~~l~~~~~~Cp~~~~ 191 (347)
+..+..+|++|...+.... ...|.||..++.+|-... ..||+-+.
T Consensus 11 ~~~~~~~C~IC~~~~~~~~~~~~~~C~H~f~~~Ci~~~~~~~--~~CP~Cr~ 60 (74)
T 2ep4_A 11 ELNLHELCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVR--KVCPLCNM 60 (74)
T ss_dssp CCCCSCBCSSSCCBCCSSSCEEEETTTEEEEHHHHHHHHHHC--SBCTTTCC
T ss_pred cCCCCCCCcCCCcccCCCCcEEEcCCCCEecHHHHHHHHHcC--CcCCCcCc
Confidence 3445578999998753322 467889988887763222 45665544
No 83
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=44.21 E-value=19 Score=25.09 Aligned_cols=34 Identities=9% Similarity=0.066 Sum_probs=23.7
Q ss_pred ccCCCCCCCCCccccccCC--CCCcchhhHHHHhhc
Q 019007 144 TEGSDISNSDISRLEVLDE--DPSAREFCVSVLRSN 177 (347)
Q Consensus 144 ~~~~d~~eC~~s~~~~~~e--e~S~~~~Cl~~l~~~ 177 (347)
....+..+|++|...+... ....|.||..++.++
T Consensus 15 ~~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~ 50 (63)
T 2ysj_A 15 NKLQEEVICPICLDILQKPVTIDCGHNFCLKCITQI 50 (63)
T ss_dssp CCCCCCCBCTTTCSBCSSCEECTTSSEECHHHHHHH
T ss_pred HhCccCCCCCcCCchhCCeEEeCCCCcchHHHHHHH
Confidence 3445567899998764211 257899999998766
No 84
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=44.00 E-value=8.1 Score=30.47 Aligned_cols=47 Identities=15% Similarity=0.415 Sum_probs=32.9
Q ss_pred cccccccccccCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCccCccccCCC
Q 019007 205 VIQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNLN 257 (347)
Q Consensus 205 ~~~~C~vC~~~~~~~~lLlCD~Cd~~yH~~CL~PPL~~iP~g~W~Cp~C~~~~ 257 (347)
++..|.+|...-..- ..+ .|+-.|+..|+..-+. .+...||.|+..-
T Consensus 14 ~~~~C~iC~~~~~~p-~~~--~CgH~fC~~Ci~~~~~---~~~~~CP~Cr~~~ 60 (115)
T 3l11_A 14 SECQCGICMEILVEP-VTL--PCNHTLCKPCFQSTVE---KASLCCPFCRRRV 60 (115)
T ss_dssp HHHBCTTTCSBCSSC-EEC--TTSCEECHHHHCCCCC---TTTSBCTTTCCBC
T ss_pred CCCCCccCCcccCce-eEc--CCCCHHhHHHHHHHHh---HCcCCCCCCCccc
Confidence 356899998754322 222 7898899999986543 3457899998765
No 85
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=43.81 E-value=6.1 Score=36.28 Aligned_cols=46 Identities=17% Similarity=0.488 Sum_probs=33.4
Q ss_pred ccccccccccCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCccCccccC
Q 019007 206 IQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSN 255 (347)
Q Consensus 206 ~~~C~vC~~~~~~~~lLlCD~Cd~~yH~~CL~PPL~~iP~g~W~Cp~C~~ 255 (347)
...|.+|..--- .-..|..|+..||..|+.--+.. .+.=.||.|..
T Consensus 180 i~~C~iC~~iv~--~g~~C~~C~~~~H~~C~~~~~~~--~~~~~CP~C~~ 225 (238)
T 3nw0_A 180 VKICNICHSLLI--QGQSCETCGIRMHLPCVAKYFQS--NAEPRCPHCND 225 (238)
T ss_dssp CCBCTTTCSBCS--SCEECSSSCCEECHHHHHHHTTT--CSSCBCTTTCC
T ss_pred CCcCcchhhHHh--CCcccCccChHHHHHHHHHHHHh--CCCCCCCCCCC
Confidence 578999998654 34789999999999999743332 23446888854
No 86
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=41.68 E-value=4.7 Score=28.67 Aligned_cols=46 Identities=17% Similarity=0.377 Sum_probs=31.5
Q ss_pred ccccccccccCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCccCccccCCC
Q 019007 206 IQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNLN 257 (347)
Q Consensus 206 ~~~C~vC~~~~~~~~lLlCD~Cd~~yH~~CL~PPL~~iP~g~W~Cp~C~~~~ 257 (347)
...|.+|...-....++ .|+-.||..|+..-+. .+.-.||.|+..-
T Consensus 15 ~~~C~IC~~~~~~p~~~---~CgH~fC~~Ci~~~~~---~~~~~CP~Cr~~~ 60 (66)
T 2ecy_A 15 KYKCEKCHLVLCSPKQT---ECGHRFCESCMAALLS---SSSPKCTACQESI 60 (66)
T ss_dssp CEECTTTCCEESSCCCC---SSSCCCCHHHHHHHHT---TSSCCCTTTCCCC
T ss_pred CCCCCCCChHhcCeeEC---CCCCHHHHHHHHHHHH---hCcCCCCCCCcCC
Confidence 46799998754333332 7888899999886543 3445799987654
No 87
>2k1p_A Zinc finger RAN-binding domain-containing protein 2; ZNF265, RNA binding, ranbp2, RBZ, ZIS, alternative splicing, metal-binding, mRNA processing; NMR {Homo sapiens} PDB: 3g9y_A
Probab=40.34 E-value=10 Score=24.51 Aligned_cols=13 Identities=38% Similarity=1.275 Sum_probs=10.1
Q ss_pred CCCCccCccccCC
Q 019007 244 PTDNWLCQCCSNL 256 (347)
Q Consensus 244 P~g~W~Cp~C~~~ 256 (347)
..|+|.|+.|-.-
T Consensus 3 ~~gDW~C~~C~~~ 15 (33)
T 2k1p_A 3 SANDWQCKTCSNV 15 (33)
T ss_dssp SSSSCBCSSSCCB
T ss_pred CCCCcccCCCCCc
Confidence 4689999988543
No 88
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=39.91 E-value=8.6 Score=26.13 Aligned_cols=44 Identities=20% Similarity=0.533 Sum_probs=28.1
Q ss_pred ccccccccccCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCccCccc
Q 019007 206 IQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCC 253 (347)
Q Consensus 206 ~~~C~vC~~~~~~~~lLlCD~Cd~~yH~~CL~PPL~~iP~g~W~Cp~C 253 (347)
...|.+|...-....++ .|.-.||..|+..-+... .+.-.||.|
T Consensus 15 ~~~C~IC~~~~~~p~~~---~CgH~fC~~Ci~~~~~~~-~~~~~CP~C 58 (58)
T 2ecj_A 15 EASCSVCLEYLKEPVII---ECGHNFCKACITRWWEDL-ERDFPCPVC 58 (58)
T ss_dssp CCBCSSSCCBCSSCCCC---SSCCCCCHHHHHHHTTSS-CCSCCCSCC
T ss_pred CCCCccCCcccCccEeC---CCCCccCHHHHHHHHHhc-CCCCCCCCC
Confidence 46799998765443343 578888888887544332 234567766
No 89
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=38.90 E-value=23 Score=24.47 Aligned_cols=42 Identities=17% Similarity=0.478 Sum_probs=27.6
Q ss_pred ccccccccccCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCccCccccCCC
Q 019007 206 IQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNLN 257 (347)
Q Consensus 206 ~~~C~vC~~~~~~~~lLlCD~Cd~~yH~~CL~PPL~~iP~g~W~Cp~C~~~~ 257 (347)
...|.+|...-..-.++ .|.-.|+..|+.. ..-.||.|+..-
T Consensus 6 ~~~C~IC~~~~~~p~~l---~CgH~fC~~Ci~~-------~~~~CP~Cr~~~ 47 (56)
T 1bor_A 6 FLRCQQCQAEAKCPKLL---PCLHTLCSGCLEA-------SGMQCPICQAPW 47 (56)
T ss_dssp CSSCSSSCSSCBCCSCS---TTSCCSBTTTCSS-------SSSSCSSCCSSS
T ss_pred CCCceEeCCccCCeEEc---CCCCcccHHHHcc-------CCCCCCcCCcEe
Confidence 46799998755433444 4676777777763 234799997664
No 90
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=36.96 E-value=7.4 Score=32.10 Aligned_cols=28 Identities=25% Similarity=0.484 Sum_probs=0.0
Q ss_pred ccCCCCCCCcccCCCCCCCCCCCccCccccCC
Q 019007 225 DYCDEAFHPSCCNPRIKILPTDNWLCQCCSNL 256 (347)
Q Consensus 225 D~Cd~~yH~~CL~PPL~~iP~g~W~Cp~C~~~ 256 (347)
-.|.-.||..|+.+=|..- -.||.|+..
T Consensus 82 ~~C~H~FH~~CI~~Wl~~~----~~CP~Cr~~ 109 (117)
T 4a0k_B 82 GVCNHAFHFHCISRWLKTR----QVCPLDNRE 109 (117)
T ss_dssp --------------------------------
T ss_pred CCcCceEcHHHHHHHHHcC----CcCCCCCCe
Confidence 3689999999999766542 369999765
No 91
>2lq6_A Bromodomain-containing protein 1; PHD finger, metal binding protein; NMR {Homo sapiens}
Probab=34.36 E-value=9.6 Score=29.80 Aligned_cols=30 Identities=30% Similarity=0.799 Sum_probs=22.7
Q ss_pred cccccccccCCCCCeEEecc--CCCCCCCcccC
Q 019007 207 QSCKLCGKADNTSTMLLCDY--CDEAFHPSCCN 237 (347)
Q Consensus 207 ~~C~vC~~~~~~~~lLlCD~--Cd~~yH~~CL~ 237 (347)
..|.+|++.+ .+.-+.|.. |..+||..|-.
T Consensus 18 l~C~iC~~~~-~GAciqC~~~~C~~~fHv~CA~ 49 (87)
T 2lq6_A 18 LTCYLCKQKG-VGASIQCHKANCYTAFHVTCAQ 49 (87)
T ss_dssp CCBTTTTBCC-SSCEEECSCTTTCCEEEHHHHH
T ss_pred CCCcCCCCCC-CcEeEecCCCCCCCcCcHHHHH
Confidence 5799997532 135788975 99999999965
No 92
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=34.03 E-value=6.7 Score=31.54 Aligned_cols=31 Identities=23% Similarity=0.460 Sum_probs=23.1
Q ss_pred EEeccCCCCCCCcccCCCCCCCCCCCccCccccCC
Q 019007 222 LLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNL 256 (347)
Q Consensus 222 LlCD~Cd~~yH~~CL~PPL~~iP~g~W~Cp~C~~~ 256 (347)
+.--.|.-.||..|+.+=|.. .-.||.|+..
T Consensus 68 ~~~~~C~H~FH~~Ci~~Wl~~----~~~CP~Cr~~ 98 (106)
T 3dpl_R 68 VAWGVCNHAFHFHCISRWLKT----RQVCPLDNRE 98 (106)
T ss_dssp EEEETTSCEEEHHHHHHHHTT----CSBCSSSCSB
T ss_pred EeecccCcEECHHHHHHHHHc----CCcCcCCCCc
Confidence 344579999999999875543 2369999875
No 93
>2lk0_A RNA-binding protein 5; zinc finger; NMR {Homo sapiens} PDB: 2lk1_A*
Probab=33.67 E-value=9.6 Score=24.53 Aligned_cols=12 Identities=33% Similarity=0.996 Sum_probs=9.3
Q ss_pred CCCccCccccCC
Q 019007 245 TDNWLCQCCSNL 256 (347)
Q Consensus 245 ~g~W~Cp~C~~~ 256 (347)
.|+|.|+.|...
T Consensus 3 ~gDW~C~~C~~~ 14 (32)
T 2lk0_A 3 FEDWLCNKCCLN 14 (32)
T ss_dssp CSEEECTTTCCE
T ss_pred CCCCCcCcCcCC
Confidence 489999998543
No 94
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=32.82 E-value=8.5 Score=27.71 Aligned_cols=45 Identities=18% Similarity=0.392 Sum_probs=30.2
Q ss_pred ccccccccccCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCccCccccCCC
Q 019007 206 IQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNLN 257 (347)
Q Consensus 206 ~~~C~vC~~~~~~~~lLlCD~Cd~~yH~~CL~PPL~~iP~g~W~Cp~C~~~~ 257 (347)
...|.+|...-... +++ .|.-.||..|+..-+.. ...||.|+..-
T Consensus 15 ~~~C~IC~~~~~~~-~~~--~CgH~fC~~Ci~~~~~~----~~~CP~Cr~~~ 59 (71)
T 2d8t_A 15 VPECAICLQTCVHP-VSL--PCKHVFCYLCVKGASWL----GKRCALCRQEI 59 (71)
T ss_dssp CCBCSSSSSBCSSE-EEE--TTTEEEEHHHHHHCTTC----SSBCSSSCCBC
T ss_pred CCCCccCCcccCCC-EEc--cCCCHHHHHHHHHHHHC----CCcCcCcCchh
Confidence 46799998754322 222 58888999998754432 25799998764
No 95
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=32.34 E-value=19 Score=25.11 Aligned_cols=42 Identities=17% Similarity=0.192 Sum_probs=26.8
Q ss_pred CCCCCCCCCccccccC---------CCCCcchhhHHHHhhcCccccccccccc
Q 019007 146 GSDISNSDISRLEVLD---------EDPSAREFCVSVLRSNGLLGAVGECSVR 189 (347)
Q Consensus 146 ~~d~~eC~~s~~~~~~---------ee~S~~~~Cl~~l~~~~l~~~~~~Cp~~ 189 (347)
..+..+|++|...+.. -....|.||..++.+|-.. ...||+-
T Consensus 12 ~~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~--~~~CP~C 62 (69)
T 2ea6_A 12 PSGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKN--ANTCPTC 62 (69)
T ss_dssp TTCCCCCTTTCCCHHHHTTTTCCEEECSSSCEEEHHHHHHHHHH--CSSCTTT
T ss_pred CCCCCCCcccCccccccccccCCeEeCCCCChhcHHHHHHHHHc--CCCCCCC
Confidence 3455789999876532 1357789999988776321 2455543
No 96
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=29.77 E-value=7.4 Score=28.34 Aligned_cols=50 Identities=20% Similarity=0.392 Sum_probs=32.0
Q ss_pred ccccccccccCCCCCeEEeccCCCCCCCcccCCCCCC--CCCCCccCccccCCCC
Q 019007 206 IQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKI--LPTDNWLCQCCSNLNS 258 (347)
Q Consensus 206 ~~~C~vC~~~~~~~~lLlCD~Cd~~yH~~CL~PPL~~--iP~g~W~Cp~C~~~~~ 258 (347)
...|.+|...-....++ .|.-.||..|+..-+.. ...+.-.||.|...-.
T Consensus 19 ~~~C~IC~~~~~~p~~~---~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~ 70 (85)
T 2ecv_A 19 EVTCPICLELLTQPLSL---DCGHSFCQACLTANHKKSMLDKGESSCPVCRISYQ 70 (85)
T ss_dssp CCCCTTTCSCCSSCBCC---SSSCCBCTTHHHHHHHHHHHTTSCCCCTTTCCSSC
T ss_pred CCCCCCCCcccCCceeC---CCCCHHHHHHHHHHHHHhhcCCCCCcCCCCCCccC
Confidence 46899998765433333 68888898898743322 1223567999986653
No 97
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=28.39 E-value=16 Score=27.64 Aligned_cols=50 Identities=20% Similarity=0.436 Sum_probs=32.2
Q ss_pred ccccccccccCCC--CCeEEeccCCCCCCCcccCCCCCCCCCCCccCccccCCCCC
Q 019007 206 IQSCKLCGKADNT--STMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNLNSN 259 (347)
Q Consensus 206 ~~~C~vC~~~~~~--~~lLlCD~Cd~~yH~~CL~PPL~~iP~g~W~Cp~C~~~~~~ 259 (347)
+..|.+|...-.. -.++-| .|+-.|+..|+.--+. .+...||.|+.....
T Consensus 11 ~~~CpICle~~~~~d~~~~p~-~CGH~fC~~Cl~~~~~---~~~~~CP~CR~~~~~ 62 (78)
T 1e4u_A 11 PVECPLCMEPLEIDDINFFPC-TCGYQICRFCWHRIRT---DENGLCPACRKPYPE 62 (78)
T ss_dssp CCBCTTTCCBCCTTTTTCCSS-TTSCCCCHHHHHHHTT---SSCSBCTTTCCBCSS
T ss_pred CCcCCccCccCcccccccccc-CCCCCcCHHHHHHHHh---cCCCCCCCCCCccCC
Confidence 4689999875421 122223 5888888888864322 256789999987644
No 98
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=27.95 E-value=11 Score=29.14 Aligned_cols=48 Identities=21% Similarity=0.357 Sum_probs=31.3
Q ss_pred ccccccccccCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCccCccccCCC
Q 019007 206 IQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNLN 257 (347)
Q Consensus 206 ~~~C~vC~~~~~~~~lLlCD~Cd~~yH~~CL~PPL~~iP~g~W~Cp~C~~~~ 257 (347)
...|.+|...-.....+ .|+-.||..|+..-+..- .+...||.|...-
T Consensus 21 ~~~C~IC~~~~~~p~~~---~CgH~fC~~Ci~~~~~~~-~~~~~CP~Cr~~~ 68 (112)
T 1jm7_A 21 ILECPICLELIKEPVST---KCDHIFCKFCMLKLLNQK-KGPSQCPLCKNDI 68 (112)
T ss_dssp HTSCSSSCCCCSSCCBC---TTSCCCCSHHHHHHHHSS-SSSCCCTTTSCCC
T ss_pred CCCCcccChhhcCeEEC---CCCCHHHHHHHHHHHHhC-CCCCCCcCCCCcC
Confidence 35799998754333332 688889999987543322 3446899997654
No 99
>1v5n_A PDI-like hypothetical protein AT1G60420; DC1 domain, zinc binding domain, PDI-like protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.49.1.3
Probab=26.90 E-value=24 Score=27.55 Aligned_cols=32 Identities=28% Similarity=0.605 Sum_probs=26.5
Q ss_pred cccccccccCCCCCeEEeccCCCCCCCcccCCC
Q 019007 207 QSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPR 239 (347)
Q Consensus 207 ~~C~vC~~~~~~~~lLlCD~Cd~~yH~~CL~PP 239 (347)
..|.+|++.. ....-.|..|+-..|+.|...|
T Consensus 48 ~~C~~C~~~~-~~~~Y~C~~C~f~lH~~Ca~~p 79 (89)
T 1v5n_A 48 YTCDKCEEEG-TIWSYHCDECDFDLHAKCALNE 79 (89)
T ss_dssp CCCTTTSCCC-CSCEEECTTTCCCCCHHHHHCS
T ss_pred eEeCCCCCcC-CCcEEEcCCCCCeEcHHhcCCC
Confidence 5799999875 4567889999999999998754
No 100
>1faq_A RAF-1; transferase, serine/threonine-protein kinase, proto- oncogene, zinc, ATP-binding, phorbol-ester binding; NMR {Homo sapiens} SCOP: g.49.1.1 PDB: 1far_A
Probab=26.60 E-value=36 Score=23.20 Aligned_cols=29 Identities=28% Similarity=0.648 Sum_probs=24.1
Q ss_pred cccccccccCCCCCeEEeccCCCCCCCcccC
Q 019007 207 QSCKLCGKADNTSTMLLCDYCDEAFHPSCCN 237 (347)
Q Consensus 207 ~~C~vC~~~~~~~~lLlCD~Cd~~yH~~CL~ 237 (347)
.+|..|++.-- +-+.|..|....|..|..
T Consensus 15 t~C~~C~~~l~--qG~~C~~C~~~~H~~C~~ 43 (52)
T 1faq_A 15 AFCDICQKFLL--NGFRCQTCGYKFHEHCST 43 (52)
T ss_dssp EECTTSSSEEC--SEEECTTTTCCBCSTTSS
T ss_pred cCCCCcccccc--cCCEeCCCCCeEChhHHh
Confidence 57888877433 678999999999999987
No 101
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.28 E-value=51 Score=23.50 Aligned_cols=42 Identities=14% Similarity=0.225 Sum_probs=26.7
Q ss_pred CCCCCCCCccccccCC---CCCcchhhHHHHhhcCcccccccccccc
Q 019007 147 SDISNSDISRLEVLDE---DPSAREFCVSVLRSNGLLGAVGECSVRS 190 (347)
Q Consensus 147 ~d~~eC~~s~~~~~~e---e~S~~~~Cl~~l~~~~l~~~~~~Cp~~~ 190 (347)
++...|++|...+... ....|.||..++..+-.. ...||+-+
T Consensus 13 ~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~--~~~CP~Cr 57 (72)
T 2djb_A 13 TPYILCSICKGYLIDATTITECLHTFCKSCIVRHFYY--SNRCPKCN 57 (72)
T ss_dssp CGGGSCTTTSSCCSSCEECSSSCCEECHHHHHHHHHH--CSSCTTTC
T ss_pred CCCCCCCCCChHHHCcCEECCCCCHHHHHHHHHHHHc--CCcCCCcC
Confidence 3446899998765322 257899999998776321 24555444
No 102
>4b2u_A S67; toxin, ICK; NMR {Sicarius dolichocephalus}
Probab=22.89 E-value=21 Score=23.43 Aligned_cols=14 Identities=21% Similarity=0.764 Sum_probs=11.5
Q ss_pred CCCccCccccCCCC
Q 019007 245 TDNWLCQCCSNLNS 258 (347)
Q Consensus 245 ~g~W~Cp~C~~~~~ 258 (347)
+|+|-|..|+....
T Consensus 16 egdwcchkcvpegk 29 (36)
T 4b2u_A 16 EGDWCCHKCVPEGK 29 (36)
T ss_dssp GCCSSSSEEEEETT
T ss_pred ccCeeeecccccCc
Confidence 68999999986653
No 103
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.68 E-value=15 Score=26.10 Aligned_cols=45 Identities=16% Similarity=0.395 Sum_probs=31.5
Q ss_pred ccccccccccCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCccCccccCCCC
Q 019007 206 IQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNLNS 258 (347)
Q Consensus 206 ~~~C~vC~~~~~~~~lLlCD~Cd~~yH~~CL~PPL~~iP~g~W~Cp~C~~~~~ 258 (347)
...|.+|...-.. .+ -.|.-.||..|+..-+. ....||.|+..-.
T Consensus 15 ~~~C~IC~~~~~~-~~---~~CgH~fc~~Ci~~~~~----~~~~CP~Cr~~~~ 59 (70)
T 2ecn_A 15 EEECCICMDGRAD-LI---LPCAHSFCQKCIDKWSD----RHRNCPICRLQMT 59 (70)
T ss_dssp CCCCSSSCCSCCS-EE---ETTTEEECHHHHHHSSC----CCSSCHHHHHCTT
T ss_pred CCCCeeCCcCccC-cc---cCCCCcccHHHHHHHHH----CcCcCCCcCCccc
Confidence 4689999876543 22 35788899999986544 3567999976543
No 104
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=22.34 E-value=6.4 Score=31.60 Aligned_cols=47 Identities=13% Similarity=0.358 Sum_probs=31.2
Q ss_pred ccccccccccCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCccCccccCCCC
Q 019007 206 IQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNLNS 258 (347)
Q Consensus 206 ~~~C~vC~~~~~~~~lLlCD~Cd~~yH~~CL~PPL~~iP~g~W~Cp~C~~~~~ 258 (347)
...|.+|...-..- +.+ .|+-.||..|+..-+. .+...||.|+..-.
T Consensus 52 ~~~C~IC~~~~~~p-~~~--~CgH~fC~~Ci~~~~~---~~~~~CP~Cr~~~~ 98 (124)
T 3fl2_A 52 TFQCICCQELVFRP-ITT--VCQHNVCKDCLDRSFR---AQVFSCPACRYDLG 98 (124)
T ss_dssp HTBCTTTSSBCSSE-EEC--TTSCEEEHHHHHHHHH---TTCCBCTTTCCBCC
T ss_pred CCCCCcCChHHcCc-EEe--eCCCcccHHHHHHHHh---HCcCCCCCCCccCC
Confidence 46799998754322 222 7888888889875443 23458999987653
No 105
>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1
Probab=22.14 E-value=44 Score=23.31 Aligned_cols=17 Identities=35% Similarity=0.980 Sum_probs=12.0
Q ss_pred CCCCCCCccCccccCCCC
Q 019007 241 KILPTDNWLCQCCSNLNS 258 (347)
Q Consensus 241 ~~iP~g~W~Cp~C~~~~~ 258 (347)
..+| .+|.||.|-..+.
T Consensus 25 ~~lP-~dw~CP~Cg~~k~ 41 (46)
T 6rxn_A 25 DQLP-DDWCCPVCGVSKD 41 (46)
T ss_dssp GGSC-TTCBCTTTCCBGG
T ss_pred hhCC-CCCcCcCCCCcHH
Confidence 3454 4699999987653
No 106
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=21.44 E-value=11 Score=30.82 Aligned_cols=45 Identities=22% Similarity=0.436 Sum_probs=29.2
Q ss_pred ccccccccccCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCccCccccCCC
Q 019007 206 IQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNLN 257 (347)
Q Consensus 206 ~~~C~vC~~~~~~~~lLlCD~Cd~~yH~~CL~PPL~~iP~g~W~Cp~C~~~~ 257 (347)
+..|.+|...-....++ .|+-.||..|+..-+.. .-.||.|+..-
T Consensus 53 ~~~C~iC~~~~~~~~~~---~CgH~fc~~Ci~~~~~~----~~~CP~Cr~~~ 97 (138)
T 4ayc_A 53 ELQCIICSEYFIEAVTL---NCAHSFCSYCINEWMKR----KIECPICRKDI 97 (138)
T ss_dssp HSBCTTTCSBCSSEEEE---TTSCEEEHHHHHHHTTT----CSBCTTTCCBC
T ss_pred cCCCcccCcccCCceEC---CCCCCccHHHHHHHHHc----CCcCCCCCCcC
Confidence 35799998754322222 58888999998744332 23699998654
No 107
>1e8j_A Rubredoxin; iron-sulfur-protein, zinc-substitution, thermostability; NMR {Desulfovibrio gigas} SCOP: g.41.5.1 PDB: 1rdg_A 2dsx_A 1spw_A
Probab=21.13 E-value=1.2e+02 Score=21.46 Aligned_cols=13 Identities=31% Similarity=1.076 Sum_probs=10.5
Q ss_pred CCccCccccCCCC
Q 019007 246 DNWLCQCCSNLNS 258 (347)
Q Consensus 246 g~W~Cp~C~~~~~ 258 (347)
.+|.||.|-..+.
T Consensus 35 ~dw~CP~Cg~~K~ 47 (52)
T 1e8j_A 35 DDWACPVCGASKD 47 (52)
T ss_dssp TTCCCSSSCCCTT
T ss_pred CCCcCCCCCCcHH
Confidence 4799999988654
No 108
>2co8_A NEDD9 interacting protein with calponin homology and LIM domains; zinc finger protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=20.69 E-value=53 Score=24.34 Aligned_cols=29 Identities=31% Similarity=0.532 Sum_probs=19.0
Q ss_pred cccccccccCCCCCeEEeccCCCCCCCcccC
Q 019007 207 QSCKLCGKADNTSTMLLCDYCDEAFHPSCCN 237 (347)
Q Consensus 207 ~~C~vC~~~~~~~~lLlCD~Cd~~yH~~CL~ 237 (347)
..|..|++.-....++. .-++.||..|..
T Consensus 16 ~~C~~C~~~I~~~e~v~--a~~~~wH~~CF~ 44 (82)
T 2co8_A 16 DLCALCGEHLYVLERLC--VNGHFFHRSCFR 44 (82)
T ss_dssp CBCSSSCCBCCTTTBCC--BTTBCCBTTTCB
T ss_pred CCCcccCCCcccceEEE--ECCCeeCCCcCE
Confidence 57888888654333443 447788887765
Done!